isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
transcript_1.known	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9680	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00002_+_0_1000
transcript_10.known	ERCC-00033	+	2014	1	FSM	ERCC-00033A	DQ516796	2014	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	2014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00033_+_0_2000
transcript_100.known	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2931.04131453311	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
transcript_10000.known	chr1	+	712	4	FSM	ENSG00000143761.16	ENST00000470670.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	319.779090415034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCACTCCTCTTGCCCT	16	True	NA	NA	False	NA	NA	NA	228082729	228098027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228082766_228097077_228097453_228097590_228097716_228097851
transcript_10007.known	chr1	-	864	6	FSM	ENSG00000162910.19	ENST00000430433.5	864	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	286.120534041162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTCTGTCTCCCCA	NA	False	NA	0	True	NA	NA	NA	228109312	228106679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228107976_228108085_228108234_228108319_228108954_228109022_228109148
transcript_10015.nic	chr1	-	823	6	NIC	ENSG00000162910.19	novel	665	6	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_4	278.367670536648	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	NA	False	NA	-7	True	NA	NA	NA	228109348	228106686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954_228109022_228109148
transcript_10016.known	chr1	-	665	6	FSM	ENSG00000162910.19	ENST00000391867.8	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	321.663177873999	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-16	True	NA	-7	True	NA	NA	NA	228109299	228106686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436_228108475_228108954_228109022_228109260
transcript_10026.known	chr1	-	722	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	338.238451391914	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-23	True	NA	1	True	NA	NA	NA	228109306	228106678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
transcript_10027.known	chr1	-	603	5	FSM	ENSG00000162910.19	ENST00000366747.7	603	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	340.068375477638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109260
transcript_10028.nic	chr1	-	1303	5	NIC	ENSG00000162910.19	novel	1423	6	NA	NA	-36	0	intron_retention	FALSE	canonical	3	166	junction_3	253.411720328796	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	NA	False	NA	-7	True	NA	NA	NA	228109348	228106686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228109022_228109148
transcript_10030.known	chr1	-	738	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	192.913678882551	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-16	True	NA	-5	True	NA	NA	NA	228109299	228106684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
transcript_10031.known	chr1	-	632	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	248.778013497978	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
transcript_10033.known	chr1	-	661	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	312.292953633105	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	0	True	NA	1	True	NA	NA	NA	228109283	228106678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
transcript_10034.known	chr1	-	565	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	343.321359014489	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
transcript_10045.known	chr1	-	990	4	FSM	ENSG00000162910.19	ENST00000366734.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	343.791603542999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	386	False	NA	1	True	NA	NA	NA	228108897	228106678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436
transcript_10050.known	chr1	+	1100	9	FSM	ENSG00000143774.17	ENST00000312726.9	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	437.22905896109	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGTGGAATGTGGCC	-14	True	NA	NA	False	AATAAA	-25	NA	228140278	228148951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10051.known	chr1	+	1065	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	534.98257857149	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	-3	True	NA	NA	False	AATAAA	-20	NA	228140289	228148946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10054.known	chr1	+	937	8	FSM	ENSG00000143774.17	ENST00000366730.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	466.048871922686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGTGACCCCCGAC	NA	False	NA	NA	False	NA	NA	NA	228139961	228148840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140160_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10056.known	chr1	+	656	8	FSM	ENSG00000143774.17	ENST00000453943.5	656	8	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	190.486594953931	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGCTTGCTGTCTGT	5	True	NA	NA	False	AAGAAA	-16	NA	228140297	228148691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10058.known	chr1	+	842	7	FSM	ENSG00000143774.17	ENST00000366728.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	485.258264569841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	-3	True	NA	NA	False	AATAAA	-29	NA	228140289	228148955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
transcript_1006.known	chr1	-	1015	8	FSM	ENSG00000117118.10	ENST00000375499.8	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_4	37.320454532744	650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTTCCTTTACTTGC	-2	True	NA	18	True	AATAAA	-31	NA	17054032	17018721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_17018959_17022607_17022731_17023972_17024075_17027748_17027866_17028599_17028737_17033059_17033146_17044760_17044889_17053947
transcript_10061.known	chr1	+	940	7	FSM	ENSG00000143774.17	ENST00000366716.1	940	7	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_3	64.5998366011005	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCATCATCCCGATCGG	422	False	NA	NA	False	CATAAA	-30	NA	228145453	228148984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_10062.known	chr1	+	7828	3	FSM	ENSG00000181873.13	ENST00000366711.4	7828	3	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTACGGGCTCTATGGTG	-1	True	NA	7	True	AATAAA	-18	NA	228165803	228182257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228166158_228174691_228175030_228175121
transcript_10063.known	chr1	-	895	1	FSM	ENSG00000181218.6	ENST00000366695.3	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGCACTTTAATTCT	-6	True	NA	-14	True	ATTAAA	-19	NA	228457873	228456978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228457000_228457900
transcript_10064.known	chr1	-	119	1	FSM	ENSG00000199396.1	ENST00000362526.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGGCTTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	228619350	228619231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228619200_228619400
transcript_10065.known	chr1	-	119	1	FSM	ENSG00000202257.1	ENST00000365387.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGGCTTTTTGCTG	3762	False	NA	NA	False	NA	NA	NA	228643927	228643808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_228643800_228643900
transcript_10066.known	chr1	+	3965	3	FSM	ENSG00000116574.6	ENST00000366691.4	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGCTCTTGCCTTTT	-21	True	NA	NA	False	AATAAA	-15	NA	228735478	228746664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228736005_228737672_228737732_228743284
transcript_10067.known	chr1	+	2987	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	43.5524548852371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTAATTTGTACTGT	-34	True	NA	NA	False	TTTAAA	-30	NA	229271110	229305894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_10071.known	chr1	+	708	6	FSM	ENSG00000168118.12	ENST00000473894.1	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	216.494434108593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGATCTTTATGGGGAA	49	False	NA	-77	True	NA	NA	NA	229271193	229303894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229271371_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_10072.known	chr1	+	2799	6	FSM	ENSG00000168118.12	ENST00000618010.4	2799	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	266.9011802147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGTAATTTGTAC	NA	False	NA	NA	False	TTTAAA	-27	NA	229271061	229305891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229271371_229295847_229295911_229297519_229297637_229298976_229299073_229302861_229302990_229303805
transcript_10073.known	chr1	+	531	3	FSM	ENSG00000168118.12	ENST00000481981.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAAATAATTGATGAT	NA	False	NA	NA	False	AATAAA	-16	NA	229271074	229288882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229271371_229286485_229286567_229288728
transcript_10074.known	chr1	-	1491	7	FSM	ENSG00000143632.15	ENST00000366684.7	1491	7	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_4	10.6731750977236	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	0	True	NA	-1	True	ATTAAA	-24	NA	229434094	229431244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_10075.known	chr1	-	5208	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_19	35.3765119818221	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAATAATTTTTTCT	-10	True	NA	-1	True	AGTAAA	-19	NA	229508341	229440258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_10083.known	chr1	-	4062	4	FSM	ENSG00000135801.10	ENST00000366675.3	4062	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTGTAGCTTCTGTTG	130	False	NA	-9	True	AATAAA	-16	NA	229625970	229599193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_229602920_229610105_229610211_229614340_229614486_229625884
transcript_10084.known	chr1	+	5601	10	FSM	ENSG00000135763.10	ENST00000258243.7	5601	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	19.6135503676589	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTCCTGTGTAATAT	23	True	NA	35	True	CATAAA	-19	NA	229626246	229660200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229645858_229645970_229647509_229647753_229651234_229651323_229654248_229654389_229659099
transcript_10085.known	chr1	+	4423	16	FSM	ENSG00000143641.10	ENST00000366672.5	4423	16	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_9	33.9937249111264	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTCTTTGCTGGCCAG	16	True	NA	19	True	AATAAA	-19	NA	230067237	230282122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230067407_230178217_230178312_230203136_230203291_230236013_230236113_230236352_230236421_230236659_230236726_230243305_230243428_230246062_230246151_230249183_230249272_230250456_230250561_230255217_230255345_230262572_230262666_230262921_230263006_230265240_230265368_230274444_230274565_230279302
transcript_10086.known	chr1	+	540	2	FSM	ENSG00000282564.2	ENST00000633012.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACAGGTGACATTAAGA	2181	False	NA	NA	False	NA	NA	NA	230426490	230436822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230426766_230436557
transcript_10087.nnic	chr1	+	2275	20	NNC	ENSG00000135773.13	novel	510	5	NA	NA	6433	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.50713905929225	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCTACTCCTTTGTA	6403	False	NA	22	True	AATGAA	-24	NA	230753847	230801772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_230754087_230755336_230755407_230759511_230759631_230762652_230762787_230767540_230767710_230769179_230769264_230772013_230772100_230774553_230774632_230778972_230779134_230780178_230780337_230780499_230780709_230785980_230786018_230787521_230787603_230790131_230790190_230791863_230791929_230792425_230792495_230792849_230792929_230795162_230795280_230798161_230798221_230801569
transcript_10088.known	chr1	+	2784	19	FSM	ENSG00000135775.14	ENST00000468893.6	2784	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	64.6516782935512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTTCTACTATAGTT	7	True	NA	NA	False	NA	NA	NA	230642504	230693625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230661324_230661558_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688419_230688563_230690013_230690154_230691383_230691565_230693291
transcript_10090.known	chr1	+	2843	18	FSM	ENSG00000135775.14	ENST00000366668.7	2843	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_14	42.2621576046222	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	21	False	NA	15	True	AATAAA	-15	NA	230642566	230693982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688422_230688563_230690013_230690154_230691383_230691565_230693291
transcript_10095.known	chr1	+	1512	4	FSM	ENSG00000223393.2	ENST00000664342.1	1512	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTAGTGTTTTCACTAT	5212	False	NA	NA	False	ATTAAA	-17	NA	230868947	230879017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230869360_230874541_230875156_230875305_230875566_230878791
transcript_10097.known	chr1	-	3112	21	FSM	ENSG00000143643.13	ENST00000366662.8	3112	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	15.9768582643773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-7	True	NA	-2	True	AATAAA	-41	NA	230978859	230906242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916300_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_10098.known	chr1	-	3276	23	FSM	ENSG00000143643.13	ENST00000366661.9	3276	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	10.5321232348806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-9	True	NA	-2	True	AATAAA	-41	NA	230978861	230906242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916303_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230943805_230943899_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_101.known	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_3	3093.43250559418	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
transcript_10102.known	chr1	+	991	6	FSM	ENSG00000173409.14	ENST00000450711.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	77.5231578304187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCTTTTGTTTCTACTT	29	False	NA	NA	False	NA	NA	NA	230979115	230999803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_230999622
transcript_10103.known	chr1	+	1428	6	FSM	ENSG00000173409.14	ENST00000310256.7	1428	6	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_3	19.3432158650003	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTCCCCTTTCCACTC	7	True	NA	NA	False	AATAAA	-18	NA	230979093	231000733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_10111.known	chr1	-	1432	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	32.5149538246977	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGACTGTTAAGT	-19	True	NA	-20	True	AATAAA	-17	NA	231241178	231223762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_10112.known	chr1	-	1430	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	31.0129901098807	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTGTGACTGTTAA	-16	True	NA	-22	True	AATAAA	-15	NA	231241175	231223764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_10113.known	chr1	-	795	6	FSM	ENSG00000143633.13	ENST00000451322.1	795	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	73.428604780426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAACAACTGAGTCAAC	69	False	NA	NA	False	AATAAA	-7	NA	231241090	231224254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231238856_231239189_231241023
transcript_10115.nic	chr1	-	708	5	ISM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	2995	0	-372	5prime_fragment	FALSE	canonical	3	115	junction_3	38.2385603808512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAAAAGAGACTGG	-19	True	NA	NA	False	ATTAAA	-18	NA	231241178	231226757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_10116.nic	chr1	-	707	5	ISM	ENSG00000143633.13	ENST00000366649.7	1430	7	1	2993	1	-372	5prime_fragment	FALSE	canonical	3	120	junction_3	36.0901648652372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAAAAGAGACTGG	-15	True	NA	NA	False	ATTAAA	-18	NA	231241174	231226757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_10117.known	chr1	-	2657	2	FSM	ENSG00000143633.13	ENST00000471936.1	2657	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCTTCAAATGTCT	-28	True	NA	NA	False	CATAAA	-17	NA	231241187	231236695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231239189_231241023
transcript_10118.known	chr1	+	2685	17	FSM	ENSG00000116906.13	ENST00000644483.1	2685	17	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	155.93828907616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTAGCTTGCTTTAATT	3	True	NA	20	True	ATTAAA	-28	NA	231241215	231277933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231241457_231250960_231251144_231258221_231258310_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_1012.known	chr1	-	1607	11	FSM	ENSG00000117115.13	ENST00000375481.1	1607	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	5.9464274989274	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTGTATAATGAGATT	4146	False	NA	0	True	AATAAA	-20	NA	17119435	17079030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
transcript_10122.known	chr1	+	2641	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_9	45.7906346562506	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTGAAAGAGATATTT	-1	True	NA	60	True	ATTAAA	-18	NA	231241211	231277973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_10128.nic	chr1	+	2299	15	NIC	ENSG00000116906.13	novel	2641	16	NA	NA	-12	-136	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	119.606860256459	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCAGCTCATTTCA	20	False	NA	24	True	AATAAA	-24	NA	231241194	231277797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_1013.known	chr1	+	3189	16	FSM	ENSG00000142619.4	ENST00000375460.3	3189	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.33998341614945	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTCTCATGTTGA	1	True	NA	24	True	AATAAA	-17	NA	17249097	17284233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_17249230_17259577_17259759_17262132_17262206_17265658_17265721_17266718_17266837_17267836_17267963_17270232_17270412_17270878_17270983_17271066_17271179_17273339_17273448_17274634_17274787_17276518_17276664_17276773_17276877_17280349_17280430_17280670_17280797_17282845
transcript_1014.known	chr1	+	1841	3	FSM	ENSG00000117148.8	ENST00000375406.2	1841	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	-16	True	NA	7	True	AATAAA	-19	NA	17755332	17827063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_17755505_17822984_17823357_17825766
transcript_10140.known	chr1	+	3223	5	FSM	ENSG00000010072.16	ENST00000295050.12	3223	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	12.6984250992003	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTATATTATGTTC	20	True	NA	NA	False	AATAAA	-17	NA	231338292	231355023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303_231351572_231352609
transcript_10147.known	chr1	+	3559	4	FSM	ENSG00000010072.16	ENST00000391858.8	3559	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	11.5758369027902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTTGACAATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	231337103	231353132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303
transcript_1015.nnic	chr1	+	1651	10	NNC	ENSG00000117154.12	novel	1885	6	NA	NA	-299	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.9977365828223	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	1	True	NA	16	True	ATTAAA	-23	NA	18107498	18378483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_18107659_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_10150.known	chr1	+	603	2	FSM	ENSG00000010072.16	ENST00000492437.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAGGCTTCTAGGG	22	True	NA	NA	False	AGTAAA	-12	NA	231338294	231340061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231338605_231339768
transcript_10152.known	chr1	+	2634	6	FSM	ENSG00000116918.15	ENST00000366639.9	2634	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	48.6399013156894	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTTTTGTTTGTTC	-20	True	NA	138	True	AATAAA	-21	NA	231528668	231566524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127_231561256_231564527
transcript_10154.nic	chr1	+	632	5	ISM	ENSG00000116918.15	ENST00000366639.9	2634	6	-21	5295	-19	0	5prime_fragment	FALSE	canonical	3	227	junction_2	39.6382075780427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAATGGGAAAGAAAAT	-41	True	NA	NA	False	AATAAA	-20	NA	231528647	231561229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127
transcript_10155.known	chr1	-	419	4	FSM	ENSG00000233461.6	ENST00000454631.2	419	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.8852107828483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATCCAGTCAACCCAAA	1618	False	NA	-60	True	NA	NA	NA	231528517	231522516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231522638_231524425_231524548_231527337_231527416_231528419
transcript_10156.known	chr1	-	2172	3	FSM	ENSG00000233461.6	ENST00000654602.1	2172	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	7.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAATCTTTTCTTTTT	-22	True	NA	NA	False	TATAAA	-28	NA	231528604	231520728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231522638_231527337_231527416_231528419
transcript_10157.known	chr1	-	280	2	FSM	ENSG00000233461.6	ENST00000416221.6	280	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGAATAGCTTGTTAT	1618	False	NA	1	True	AATAAA	-22	NA	231528517	231522455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_231522638_231528419
transcript_1016.known	chr1	+	1892	10	FSM	ENSG00000117154.12	ENST00000251296.4	1892	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	21.6920079724433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	9	True	NA	16	True	ATTAAA	-23	NA	18107797	18378483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_10160.nnic	chr1	+	2355	6	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41674	1168	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_3	14.5684590811795	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGGGGTATAATTGT	NA	False	NA	6	True	AATAAA	-24	NA	232118416	232186811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232177207_232177267_232183937_232184078_232185098
transcript_10164.nnic	chr1	+	2296	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41674	1168	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	12.8646803302686	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGGGGTATAATTGT	NA	False	NA	6	True	AATAAA	-24	NA	232118416	232186811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_10167.known	chr1	+	6324	5	FSM	ENSG00000135778.12	ENST00000366628.10	6324	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	47.1824914560476	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTGTCTTATTTTC	-14	True	NA	16	True	TATAAA	-16	NA	232950610	232983882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232978162
transcript_10177.known	chr1	+	980	4	FSM	ENSG00000135778.12	ENST00000490807.5	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	228.663265280825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	-11	True	NA	-26	True	AAGAAA	-31	NA	232950613	232978751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232978162
transcript_10181.known	chr1	+	767	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	198.570446497514	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACATGATTTGGGT	-20	True	NA	49	True	NA	NA	NA	232950604	232978482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
transcript_10189.known	chr1	+	882	3	FSM	ENSG00000135778.12	ENST00000496662.5	882	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTAGGTCATCTCCCC	8	True	NA	-55	True	AAGAAA	-2	NA	232950632	232978722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232969908_232970119_232978162
transcript_10195.known	chr1	+	1762	5	FSM	ENSG00000135778.12	ENST00000366627.4	1762	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	240.373147418758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGAACTCTTTGTT	15	True	NA	15	True	AATAAA	-17	NA	232950639	232977528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232976341
transcript_10196.known	chr1	+	2061	3	FSM	ENSG00000135750.15	ENST00000366621.8	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	22.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGCTTTCATATATCA	4	True	NA	18	True	AATAAA	-23	NA	233614105	233672514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_233614527_233666594_233666991_233671270
transcript_102.known	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3382.43472467196	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
transcript_10200.known	chr1	+	697	3	FSM	ENSG00000168275.16	ENST00000619305.1	697	3	0	0	0	0	multi-exon	TRUE	canonical	3	532	junction_2	5.5	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTTGTT	12	True	NA	7	True	AGTAAA	-20	NA	234373467	234384048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_234373679_234374229_234374390_234383722
transcript_10201.known	chr1	+	641	3	FSM	ENSG00000168275.16	ENST00000366613.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	250	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTTGTTTTGTTTTT	6	True	NA	4	True	AGTAAA	-17	NA	234373682	234384045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_234373841_234374229_234374390_234383722
transcript_10203.known	chr1	+	1013	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTGTTTTTG	24	False	NA	5	True	AGTAAA	-18	NA	234373700	234384046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_234374390_234383722
transcript_10204.known	chr1	-	5206	30	FSM	ENSG00000059588.10	ENST00000040877.2	5206	30	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_20	28.7430703017024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTCCTAGAAACGCCT	-16	True	NA	-12	True	AATAAA	-24	NA	234479179	234391312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234401180_234401263_234405902_234406100_234410444_234410532_234418083_234418234_234420701_234420813_234425672_234425794_234427316_234427389_234427575_234427767_234429135_234429325_234429415_234429678_234430086_234430302_234433409_234433572_234437274_234437373_234446802_234446976_234448479_234448580_234450427_234450567_234457666_234457757_234459229_234459327_234460260_234460397_234463836_234463935_234465655_234465709_234467501_234467651_234471187_234471258_234472713_234472812_234478172
transcript_10205.known	chr1	-	1650	8	FSM	ENSG00000059588.10	ENST00000462259.5	1650	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	58.6459456294765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTCCTTTAATAAAATAT	NA	False	NA	0	True	AATAAA	-20	NA	234406380	234391377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902
transcript_10206.nic	chr1	-	1567	7	ISM	ENSG00000059588.10	ENST00000040877.2	5206	30	72825	26	26	0	3prime_fragment	FALSE	canonical	3	117	junction_5	25.4476587004253	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATGGATTTTTTAAG	NA	False	NA	-38	True	AATAAA	-24	NA	234406354	234391338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234401180_234401263_234405902
transcript_1022.known	chr1	+	491	2	FSM	ENSG00000225387.1	ENST00000420211.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGACCCCAAGCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	18385828	18388514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_18386221_18388415
transcript_10220.known	chr1	-	3283	5	FSM	ENSG00000173726.11	ENST00000366607.5	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_1	93.6199097414647	1154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTGGCGTATGTTT	1	True	NA	-39	True	ATTAAA	-15	NA	235128837	235109340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235112109_235113767_235113911_235119817_235119900_235122325_235122373_235128594
transcript_10229.known	chr1	-	5811	23	FSM	ENSG00000054267.22	ENST00000349213.7	5811	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	27.5841312627507	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTCTAAAAGATTT	568	False	NA	-16	True	AATAAA	-25	NA	235328219	235166894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_10231.nic	chr1	-	2420	18	ISM	ENSG00000054267.22	ENST00000421364.5	5151	25	-79	28147	4	-15892	5prime_fragment	FALSE	canonical	3	84	junction_1	17.3867069295675	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCTTGTTTTTACTA	574	False	NA	NA	False	AATAAA	-2	NA	235328213	235196030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_235196116_235213768_235214027_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_1024.known	chr1	-	2124	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	35.8723663377072	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-12	True	NA	-8	True	AATAAA	-16	NA	18902553	18871429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_10241.known	chr1	-	1759	16	FSM	ENSG00000054267.22	ENST00000418304.1	1759	16	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_15	32.0621618457368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCAGGAAAAAGAAGTTAA	591	False	NA	NA	False	AGTAAA	-34	NA	235328196	235219926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327935
transcript_10246.known	chr1	-	3463	17	FSM	ENSG00000054267.22	ENST00000474953.5	3463	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	319.089622990156	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTTGAGTTTTATA	NA	False	NA	-3	True	AATAAA	-34	NA	235194077	235131633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173_235161458_235168543_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012
transcript_10248.known	chr1	-	2315	11	FSM	ENSG00000054267.22	ENST00000466653.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	12.4402572320672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	570	False	NA	NA	False	NA	NA	NA	235328217	235228310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_10254.known	chr1	-	1847	11	FSM	ENSG00000188739.15	ENST00000408888.8	1847	11	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_7	39.7292083988594	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGCTCAAGTTC	6	True	NA	0	True	ATTAAA	-19	NA	235161250	235131182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_10256.known	chr1	-	1273	10	FSM	ENSG00000188739.15	ENST00000447801.5	1273	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	235.194482172615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTATTATCTGCTGATA	36	True	NA	32	True	AATAAA	-1	NA	235161220	235131666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_10257.nic	chr1	-	1287	10	NIC	ENSG00000188739.15	novel	1847	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	232.920799340531	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCGTCTGCTATTCAT	-37	True	NA	-18	True	AATAAA	-19	NA	235161293	235131648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160892_235161068_235161173
transcript_10260.nnic	chr1	-	1055	9	NIC	ENSG00000188739.15	novel	1847	11	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	262.799799039116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCGTCTGCTATTCAT	-37	True	NA	-18	True	AATAAA	-19	NA	235161293	235131648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235160892_235161068_235161173
transcript_10265.known	chr1	-	881	5	FSM	ENSG00000188739.15	ENST00000476261.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	40.5115724207294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGCCTGCAATGTACT	24	True	NA	NA	False	AATAAA	-15	NA	235161232	235152487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_10266.known	chr1	-	409	4	FSM	ENSG00000188739.15	ENST00000485019.1	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	373.827351713179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAACCTCCGCTTCCCAG	40	True	NA	NA	False	NA	NA	NA	235161216	235160194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235160249_235160510_235160648_235160892_235161068_235161173
transcript_10267.nic	chr1	+	1697	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-10	3687	1	10	multi-exon	FALSE	canonical	3	147	junction_4	25.7602376493308	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTGACAACCAACTAATAA	-15	True	NA	-21	True	NA	NA	NA	235367416	235448756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10268.nic	chr1	+	1893	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-10	3491	1	0	multi-exon	FALSE	canonical	3	147	junction_4	25.7602376493308	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	-15	True	NA	8	True	AATAAA	-2	NA	235367416	235448952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1027.known	chr1	-	3139	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	15.6010530780091	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-14	True	NA	-8	True	AATAAA	-16	NA	18902555	18871429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_10270.nnic	chr1	+	1928	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	17	126	0	0	multi-exon	FALSE	canonical	3	12	junction_1	50.0947539668576	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	-2	True	NA	8	True	AATAAA	-2	NA	235367429	235448952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10271.known	chr1	+	2895	4	FSM	ENSG00000152904.11	ENST00000282841.9	2895	4	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	28.6395220320141	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAAGTAGATTTGTTC	-1	True	NA	8	True	ATTAAA	-24	NA	235328569	235344532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235328779_235335241_235335335_235341707_235341779_235342010
transcript_10272.nnic	chr1	+	3178	4	NIC	ENSG00000152904.11	novel	2895	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	213.685646582908	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTTATCCATACACT	-1	True	NA	13	True	AATAAA	-16	NA	235328569	235343093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_235330501_235335241_235335335_235341707_235341779_235342010
transcript_10273.known	chr1	+	868	4	FSM	ENSG00000152904.11	ENST00000497327.1	868	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	213.215071387242	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATATCTTGCGCCAGAG	23	False	NA	NA	False	NA	NA	NA	235329028	235342559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235329184_235335241_235335335_235341707_235341779_235342010
transcript_10275.known	chr1	+	1407	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	221	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	0	True	NA	58	True	NA	NA	NA	235328570	235343138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235328779_235341707_235341779_235342010
transcript_10276.known	chr1	+	470	2	FSM	ENSG00000152904.11	ENST00000482013.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCTGTAGTTTTTTCA	2	True	NA	NA	False	NA	NA	NA	235328572	235329984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235328779_235329720
transcript_10277.known	chr1	+	2102	18	FSM	ENSG00000284770.2	ENST00000646536.1	2102	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	75.3161732402616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	-2	True	NA	0	True	NA	NA	NA	235367429	235448944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235432945_235433172_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438927_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1028.known	chr1	-	5408	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_14	59.234737546742	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	20	False	NA	NA	False	NA	NA	NA	19251509	19216873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
transcript_10280.known	chr1	+	1779	16	FSM	ENSG00000284770.2	ENST00000643142.1	1779	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	52.6204860824713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAAAGGCTTTGAA	-2	True	NA	-4	True	NA	NA	NA	235367429	235448940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10282.known	chr1	+	1801	16	FSM	ENSG00000284770.2	ENST00000647418.1	1801	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	53.3614925661651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	-9	True	NA	7	True	AATAAA	-1	NA	235367422	235448951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_10283.known	chr1	+	1683	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.3242759573416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	-2	True	NA	0	True	NA	NA	NA	235367429	235448944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1029.nnic	chr1	+	999	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-13	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	139.926264064328	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGGCCCTCTTTTTTC	-22	True	NA	18	True	AGTAAA	-15	NA	19251791	19260126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19258963_19260023
transcript_10293.known	chr1	-	4897	4	FSM	ENSG00000168243.11	ENST00000391854.7	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_3	48.4033974932431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAATCCTACTTTTTTG	-19	True	NA	-11	True	AATAAA	-24	NA	235649784	235547684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235649661
transcript_10294.known	chr1	-	4978	4	FSM	ENSG00000168243.11	ENST00000450593.5	4978	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	406.244863215388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGAATCCTACTTTTT	3	True	NA	-13	True	AATAAA	-22	NA	235650754	235547686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235650548
transcript_103.known	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8281	junction_1	0	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_8991_13672
transcript_1030.nnic	chr1	+	1242	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-259	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	139.926264064328	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGGCCCTCTTTTTTC	-26	True	NA	18	True	AGTAAA	-15	NA	19251545	19260126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19258978_19260041
transcript_10300.known	chr1	+	3116	6	FSM	ENSG00000186197.15	ENST00000359362.6	3116	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	6.7705243519243	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTTGTTGGTTTATT	-9	True	NA	22	True	AAAAAG	-45	NA	236395412	236484930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_236395661_236409215_236409275_236414259_236414300_236427391_236427451_236468230_236468277_236482266
transcript_10303.known	chr1	-	8459	45	FSM	ENSG00000119285.11	ENST00000366582.8	8459	45	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_32	55.9406415041947	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTGCCTCTTCCTGA	-9	True	NA	-19	True	CATAAA	-17	NA	236604516	236549004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_10305.nic	chr1	-	2347	17	ISM	ENSG00000119285.11	ENST00000366581.6	6538	44	-23	34386	-11	10715	5prime_fragment	FALSE	canonical	3	301	junction_4	43.1225995708747	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGCTTGAAAGTGTC	-20	True	NA	NA	False	NA	NA	NA	236604527	236585056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_10308.known	chr1	+	5957	10	FSM	ENSG00000116977.19	ENST00000366584.9	5957	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	11.5127411973232	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGGTCTGTTATA	1	True	NA	NA	False	AATAAA	-32	NA	236523981	236552981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_10311.nic	chr1	-	638	2	ISM	ENSG00000119285.11	ENST00000366579.1	793	3	-39	771	-11	-771	5prime_fragment	FALSE	canonical	3	516	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTCCCTGCCACGAA	-20	True	NA	NA	False	NA	NA	NA	236604527	236603595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_236604128_236604421
transcript_10312.known	chr1	-	156	1	FSM	ENSG00000227854.1	ENST00000422215.1	156	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTGAACATGAGATGAC	NA	False	NA	NA	False	NA	NA	NA	239052903	239052747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_239052700_239052900
transcript_10314.known	chr1	+	8780	5	FSM	ENSG00000133019.12	ENST00000255380.8	8780	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.08972473588517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGCTTTTATTTA	NA	False	NA	NA	False	AATAAA	-19	NA	239629072	239915452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_239629540_239632223_239632287_239678185_239678289_239827251_239827379_239907432
transcript_10315.nic	chr1	+	516	2	ISM	ENSG00000133019.12	ENST00000255380.8	8780	5	14	283166	14	26079	5prime_fragment	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCCTTTTTCTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	239629086	239632286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_239629540_239632223
transcript_10317.known	chr1	+	473	2	FSM	ENSG00000287516.1	ENST00000413994.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTATATCGATTGAAC	441	False	NA	13	True	AATAAA	-24	NA	241424397	241433492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_241424550_241433171
transcript_10318.known	chr1	-	1802	11	FSM	ENSG00000091483.8	ENST00000682162.1	1802	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	215.540344251372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACTTGTATTATAGTTG	11	True	NA	-1	True	AATAAA	-34	NA	241519722	241497587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519059_241519089_241519590
transcript_10320.known	chr1	-	1791	10	FSM	ENSG00000091483.8	ENST00000366560.4	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_5	67.6550801975965	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCTATGTTAATTGA	-22	True	NA	-16	True	AATAAA	-37	NA	241519755	241497602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_10329.known	chr1	-	1816	3	FSM	ENSG00000054277.14	ENST00000490673.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	37.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	6	True	NA	0	True	AATAAA	-26	NA	241640355	241593601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_241594692_241597745_241597998_241639881
transcript_1033.known	chr1	+	2049	8	FSM	ENSG00000053372.5	ENST00000330263.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	22.8249773677157	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCCTCTTTTTTCTG	-9	True	NA	20	True	AGTAAA	-17	NA	19251804	19260128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_10330.known	chr1	-	1015	6	FSM	ENSG00000288723.1	ENST00000684005.1	1015	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTATAATAATGAAAGAA	7003	False	NA	NA	False	NA	NA	NA	241848128	241722925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_241723429_241723857_241723939_241728734_241728835_241742058_241742107_241765061_241765185_241847968
transcript_10332.known	chr1	+	3449	16	FSM	ENSG00000174371.17	ENST00000366548.8	3449	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	48.4268061672	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAGGAAATCACTGTG	-8	True	NA	NA	False	AGTAAA	-15	NA	241848203	241889939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_241848354_241848730_241849028_241849111_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_10336.nic	chr1	+	3198	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	30.8439952148927	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	170	False	NA	21	True	AATACA	-19	NA	241848156	241889746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_10337.known	chr1	-	1207	4	FSM	ENSG00000197769.6	ENST00000357246.4	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.05480466765633	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGGGCTCGGTACTAG	1	True	NA	NA	False	NA	NA	NA	241999098	241995489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_241996386_241998513_241998621_241998775_241998832_241998950
transcript_10339.known	chr1	+	766	3	FSM	ENSG00000224525.2	ENST00000421878.2	766	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	13	False	NA	NA	False	ATTAAA	-17	NA	242203554	242210827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_242203744_242209217_242209336_242210368
transcript_10343.nic	chr1	-	846	7	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	34	74666	-16	1520	5prime_fragment	FALSE	canonical	0	0	junction_3	66.5150358941495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTGAAGAAAAAAACCATGA	-18	True	NA	NA	False	AAAAAG	-23	NA	243255247	243199093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_10344.known	chr1	-	608	4	FSM	ENSG00000143702.16	ENST00000522995.1	608	4	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_3	76.8505042273634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATATGATATCCTTAAA	7	True	NA	NA	False	NA	NA	NA	243255348	243211894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_243211965_243221723_243221814_243225175_243225322_243255046
transcript_10346.known	chr1	+	2581	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	17.8119745111585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-22	True	NA	23	True	AATAAA	-16	NA	243256040	243500091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
transcript_10348.nic	chr1	+	2442	17	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	19.1261233330228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-12	True	NA	23	True	AATAAA	-16	NA	243256050	243500091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
transcript_10354.nnic	chr1	+	1730	10	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	-36	1627	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	21.542951641595	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTATTCAATTCTGC	298	False	NA	4	True	AATAAA	-14	NA	243255997	243318522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243318036
transcript_10356.nic	chr1	+	1360	10	ISM	ENSG00000054282.16	ENST00000366541.8	2581	18	-43	169436	-36	13760	5prime_fragment	FALSE	canonical	0	0	junction_9	21.542951641595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATAACGAAAGAAAGGG	298	False	NA	NA	False	NA	NA	NA	243255997	243330655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539
transcript_10359.nnic	chr1	+	1547	9	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	11	1627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.2886290267689	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTATTCAATTCTGC	-11	True	NA	4	True	AATAAA	-14	NA	243256051	243318522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243307988_243308178_243316754_243316894_243318036
transcript_10363.nic	chr1	+	1953	8	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	9	-448	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	21.8417312612759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCGAGCTGGAACT	-13	True	NA	NA	False	NA	NA	NA	243256049	243306100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243305011
transcript_10366.nic	chr1	+	1100	7	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	-36	-233	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	25.4476587004253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAGAATCACTAACTG	298	False	NA	NA	False	AAAAAG	-15	NA	243255997	243305324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243305011
transcript_10374.known	chr1	+	525	3	FSM	ENSG00000054282.16	ENST00000497459.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	21	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTGTAATGTTTC	-14	True	NA	21	True	AATAAA	-14	NA	243487814	243500089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_243487879_243489013_243489141_243499755
transcript_10375.nnic	chr1	+	532	3	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	27	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-9	True	NA	23	True	AATAAA	-16	NA	243487752	243500091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_243487822_243489013_243489141_243499755
transcript_10376.known	chr1	-	2555	13	FSM	ENSG00000035687.10	ENST00000366535.4	2555	13	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_9	42.7436642478547	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCGTATTGTGTTTT	7	True	NA	-2	True	ATTAAA	-21	NA	244451909	244408493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_244409639_244411286_244411437_244415980_244416079_244417627_244417753_244418759_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320_244424388_244432544_244432596_244436824_244436894_244437665_244437769_244451634
transcript_10377.known	chr1	+	4017	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_3	84.4345160464605	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	20	True	NA	NA	False	ATTAAA	-19	NA	244653125	244709033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
transcript_10380.known	chr1	-	6867	14	FSM	ENSG00000153187.20	ENST00000640218.2	6867	14	0	0	0	0	multi-exon	FALSE	canonical	2	1162	junction_13	1091.4602454765	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-1	True	NA	-3	True	ATTAAA	-19	NA	244864543	244850296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
transcript_10382.known	chr1	-	6827	14	FSM	ENSG00000153187.20	ENST00000444376.7	6827	14	0	0	0	0	multi-exon	FALSE	canonical	2	3117	junction_4	695.053673803294	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	9	False	NA	-3	True	ATTAAA	-19	NA	244864560	244850296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
transcript_10385.known	chr1	-	3207	13	FSM	ENSG00000153187.20	ENST00000440865.2	3207	13	0	0	0	0	multi-exon	FALSE	canonical	2	3117	junction_4	639.755829073353	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTCATTTTACT	1463	False	NA	-41	True	AAGAAA	-37	NA	244863106	244853405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618
transcript_10395.known	chr1	+	2290	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	657.901883937787	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	-1	True	NA	9	True	AATAAA	-17	NA	244835658	244845057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
transcript_104.known	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4001_+_0_4000
transcript_1040.nic	chr1	+	1580	8	NIC	ENSG00000053372.5	novel	2049	8	NA	NA	3	538	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	139.303808348545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAACCTTGCAGGATG	-6	True	NA	NA	False	AGTAAA	-24	NA	19251807	19259277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_19252249_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_10403.known	chr1	+	1005	3	FSM	ENSG00000203667.10	ENST00000391839.6	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	527	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAATATTATTTAAAA	-4	True	NA	94	True	NA	NA	NA	244835655	244843880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244835757_244842194_244842259_244843040
transcript_10407.known	chr1	+	535	1	FSM	ENSG00000273175.1	ENST00000610145.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAAGTTTTCTGTAGCT	55	False	NA	NA	False	AATAAA	-14	NA	244864737	244865272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244864700_244865300
transcript_1041.nic	chr1	+	1750	8	NIC	ENSG00000053372.5	novel	2049	8	NA	NA	3	-681	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	139.303808348545	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTGTGGTCCCCACTG	-6	True	NA	17	True	AATAAA	-22	NA	19251807	19259447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_19252249_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_10411.nnic	chr1	+	2345	8	NNC	ENSG00000203666.13	novel	1418	8	NA	NA	-15	-1350	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	75.1643098111581	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTTTGTTGACTGTTCC	134	False	NA	14	True	AATAAA	-14	NA	244970270	245090439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244_245088160_245089530
transcript_10412.known	chr1	+	860	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	74.3329520139086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTATTTATTTAAAAAC	-6	True	NA	NA	False	TTTAAA	-36	NA	244970355	245087556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10416.known	chr1	+	6167	8	FSM	ENSG00000203666.13	ENST00000366522.6	6167	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	85.4481582897024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTAGGGAAGTTTTT	-2	True	NA	NA	False	AGTAAA	-7	NA	244969981	245127164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_10419.nic	chr1	+	608	7	ISM	ENSG00000203666.13	ENST00000366523.6	1418	8	649	446	4	-165	3prime_fragment	FALSE	canonical	3	103	junction_1	45.4422710700071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTAGAAATTGCTTGT	10	True	NA	NA	False	ATTAAA	-31	NA	244970330	245087391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10420.nic	chr1	+	930	7	ISM	ENSG00000203666.13	ENST00000366523.6	1418	8	589	184	-15	72	3prime_fragment	FALSE	canonical	3	103	junction_1	45.4422710700071	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGCTGACAAAATGAAAA	134	False	NA	NA	False	AATAAA	-23	NA	244970270	245087653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10421.nic	chr1	+	1116	7	ISM	ENSG00000203666.13	ENST00000366523.6	1418	8	589	-2	-15	2	3prime_fragment	FALSE	canonical	3	103	junction_1	45.4422710700071	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	134	False	NA	4	True	AATAAA	-14	NA	244970270	245087839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10424.known	chr1	+	527	7	FSM	ENSG00000203666.13	ENST00000447569.6	527	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	73.8414216788623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTCCCGGGTTCAAGA	6	True	NA	NA	False	NA	NA	NA	244970326	245121981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_10431.known	chr1	+	906	6	FSM	ENSG00000203666.13	ENST00000473686.5	906	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	65.2686754883229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGTGGAAGGTGATT	30	False	NA	18	True	AATGAA	-37	NA	244970350	245087794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_10434.known	chr1	+	1201	6	FSM	ENSG00000203666.13	ENST00000497591.5	1201	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	90	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAATCACTTCAATGT	149	False	NA	23	True	AATAAA	-35	NA	244970285	245091806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245091026
transcript_10435.known	chr1	+	1389	6	FSM	ENSG00000203666.13	ENST00000487845.5	1389	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	89.4507685825002	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCCTTCTGTGTCTGG	-5	True	NA	33	True	CATAAA	-15	NA	244970389	245122991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_10437.known	chr1	-	1209	6	FSM	ENSG00000185420.19	ENST00000403792.7	1209	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.5825875937953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTCATTCCTAGTGTTA	5	True	NA	NA	False	TATAAA	-45	NA	246507312	246325812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246326396_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
transcript_10440.known	chr1	-	1042	8	FSM	ENSG00000185420.19	ENST00000470510.5	1042	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	93.4702833929106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCATCTGGTAATTG	NA	False	NA	-22	True	AATAAA	-18	NA	245929937	245749350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_245749665_245764040_245764150_245814341_245814416_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869
transcript_10445.known	chr1	-	1784	8	FSM	ENSG00000162851.8	ENST00000366514.5	1784	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	14.6133849743365	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-5	True	NA	NA	False	ATTAAA	-17	NA	246566261	246540560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
transcript_10448.nnic	chr1	-	1652	7	NIC	ENSG00000162851.8	novel	1784	8	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	54.5058610507979	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	246566283	246540560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246564345_246564435_246565825
transcript_10452.nnic	chr1	-	1486	6	NIC	ENSG00000162851.8	novel	1784	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	62.0419213113198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-10	True	NA	NA	False	ATTAAA	-17	NA	246566266	246540560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246564345_246564435_246565825
transcript_10454.known	chr1	+	5127	11	FSM	ENSG00000162852.14	ENST00000366513.9	5127	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	14.2017604542536	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCCTTATTTTGTTTTT	-2	True	NA	26	True	AATAAA	-28	NA	246566455	246668595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138_246648038_246660198_246660335_246665699
transcript_10460.nnic	chr1	+	1522	12	NNC	ENSG00000143653.10	novel	2141	12	NA	NA	-60	-666	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	92.0896975600106	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTGATTTTGTGATT	-31	True	NA	34	True	ATTAAA	-38	NA	246724348	246767471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764345_246766057_246766140_246767194
transcript_10461.known	chr1	+	2141	12	FSM	ENSG00000143653.10	ENST00000366510.4	2141	12	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_8	29.2357191245106	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGTTCATTACCTAA	29	True	NA	NA	False	AATAAA	-19	NA	246724408	246768137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764358_246766057_246766140_246767194
transcript_10465.nic	chr1	-	1923	4	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	81726	218	212	-218	3prime_fragment	FALSE	canonical	3	231	junction_1	10.3708994574027	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGTTAATACTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	246849637	246839315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614
transcript_10466.nic	chr1	-	1870	4	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	81726	271	212	-271	3prime_fragment	FALSE	canonical	3	231	junction_1	10.3708994574027	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTAAACAATTCCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	246849637	246839368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614
transcript_10467.nic	chr1	-	1866	4	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	80557	1444	-957	420	3prime_fragment	FALSE	canonical	3	231	junction_1	10.3708994574027	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTTGTGTCTTGGATTT	NA	False	NA	-4	True	AATAAA	-15	NA	246850806	246840541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614
transcript_10475.known	chr1	-	885	6	FSM	ENSG00000197472.15	ENST00000479214.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	46.7563899376331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTTTCTTTTTT	-2	True	NA	88	True	AATAGA	-20	NA	247008056	246945546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_10476.known	chr1	-	826	6	FSM	ENSG00000197472.15	ENST00000487338.6	826	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	59.3767631317168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTATTTCTGATGAATA	NA	False	NA	-40	True	ATTAAA	-15	NA	247008093	246945674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246945828_246967694_246967793_246988124_246988256_246999347_246999441_246999911_247000075_247007905
transcript_10477.known	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	19.4307888557196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-3	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
transcript_10478.known	chr1	-	4197	4	FSM	ENSG00000277462.2	ENST00000366503.3	4197	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	24.589970855344	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGCCTTGAGTGTTTT	0	True	NA	-2	True	NA	NA	NA	247078811	247034636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247038428_247038809_247038871_247039410_247039538_247078593
transcript_10479.nnic	chr1	-	1912	4	NNC	ENSG00000277462.2	novel	4197	4	NA	NA	0	-2153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.5259578327656	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATGTATGTGAAGTTT	0	True	NA	-24	True	AATAAA	-14	NA	247078811	247036789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_247038428_247038809_247038871_247039410_247039538_247078725
transcript_10480.nnic	chr1	-	1765	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-55	1928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.9484512566783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCGTGAGTTCTTTGC	7969	False	NA	-21	True	CATAAA	-16	NA	247104427	247098033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_247098316_247100255_247101320_247101730_247101792_247101986_247102114_247104196
transcript_10483.nnic	chr1	-	1698	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-55	1861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.9484512566783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTATTTTTTGCTAAT	7969	False	NA	-8	True	ATTAAA	-24	NA	247104427	247098100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_247098316_247100255_247101320_247101730_247101792_247101986_247102114_247104196
transcript_10484.known	chr1	-	1951	4	FSM	ENSG00000188295.15	ENST00000343381.10	1951	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	18.1536650722535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAATAA	8024	False	NA	-38	True	NA	NA	NA	247104372	247099990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247103938
transcript_10485.known	chr1	-	1706	4	FSM	ENSG00000188295.15	ENST00000448299.7	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	6.84754619472471	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCACATTGCAGTT	-12	True	NA	-9	True	AATAAA	-22	NA	247104356	247099961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247104196
transcript_10488.known	chr1	-	2243	4	FSM	ENSG00000196418.13	ENST00000472531.5	2243	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	60.8166643829359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGCTATCCTTATATTT	9	False	NA	NA	False	AATAAA	-16	NA	247172005	247121974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247123872_247159005_247159067_247159686_247159814_247171847
transcript_10489.known	chr1	-	956	4	FSM	ENSG00000196418.13	ENST00000491356.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58.9764548122573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	12	False	NA	-12	True	AATAAA	-17	NA	247172002	247138144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247138758_247159005_247159067_247159686_247159814_247171847
transcript_1049.known	chr1	-	1360	7	FSM	ENSG00000053371.13	ENST00000235835.8	1360	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	24.9443825784929	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTCTCTGCTGTTAA	-34	True	NA	-5	True	NA	NA	NA	19312144	19303964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308157_19308263_19308454_19308643_19311826
transcript_10491.nnic	chr1	-	1112	4	NNC	ENSG00000196418.13	novel	2776	4	NA	NA	-18	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.1986066296237	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATTTCATTGTCAAGT	NA	False	NA	-5	True	AATAAA	-45	NA	247172038	247154962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_247155696_247159005_247159067_247159686_247159814_247171847
transcript_10492.known	chr1	-	1674	4	FSM	ENSG00000196418.13	ENST00000340684.10	1674	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	38.1342657228669	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGAGGTG	-2	True	NA	NA	False	AATATA	-18	NA	247172016	247155900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247157218_247159005_247159067_247159686_247159814_247171847
transcript_10494.known	chr1	-	2776	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	46.6499970227461	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-6	True	NA	-31	True	AATAAA	-19	NA	247172020	247154988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
transcript_105.known	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4002_+_0_4000
transcript_10500.known	chr1	-	1246	1	FSM	ENSG00000259865.1	ENST00000566446.1	1246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTGTGGTGAAAA	1249	False	NA	-4	True	ATTAAA	-24	NA	247188526	247187280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_247187300_247188500
transcript_10504.known	chr1	-	2065	12	FSM	ENSG00000171163.16	ENST00000451251.5	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	52.7517184710877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGAGCTGGACTACTTT	260	False	NA	-64	True	NA	NA	NA	248858860	248850065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858511
transcript_10505.known	chr1	-	1942	12	FSM	ENSG00000171163.16	ENST00000306601.9	1942	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	42.7879646320711	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-1	True	NA	-6	True	AATAAA	-15	NA	248859085	248850007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
transcript_10518.known	chr1	+	2717	3	FSM	ENSG00000185220.12	ENST00000329291.6	2717	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	13	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCTGTTGTGCTAGCA	-21	True	NA	8	True	ATTAAA	-16	NA	248906234	248919146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_248906343_248913815_248913880_248916601
transcript_1052.known	chr1	+	1805	9	FSM	ENSG00000040487.13	ENST00000375155.7	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	16.7760990698076	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	11	True	NA	25	True	AATAAA	-34	NA	19312325	19329300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_10522.known	chr1	+	2879	3	FSM	ENSG00000185220.12	ENST00000355360.8	2879	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	36	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTGCATCCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	248906195	248919946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_248906343_248913815_248913880_248917278
transcript_10525.nnic	chr10	-	1661	4	NIC	ENSG00000261456.6	novel	1562	4	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	74182	46887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_48115_48614_48726_48803_48913_73968
transcript_10527.known	chr10	+	4100	15	FSM	ENSG00000015171.20	ENST00000381604.9	4100	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	32.3356914071048	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	1	True	NA	25	True	AATAAA	-19	NA	135454	254637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_10529.known	chr10	+	3898	14	FSM	ENSG00000015171.20	ENST00000381607.8	3898	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	43.2961454752932	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTAGCTTTAGTA	-9	True	NA	14	True	AATAAA	-8	NA	135483	254626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_135560_179993_180129_209888_210049_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_10530.nic	chr10	+	1538	3	ISM	ENSG00000015171.20	ENST00000403354.5	1664	13	-2	41257	-2	-26438	5prime_fragment	FALSE	canonical	3	111	junction_1	50.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTATAGATATCTTTT	-11	True	NA	NA	False	AAAAAG	-12	NA	135481	211213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_135560_179993_180129_209888
transcript_10533.known	chr10	+	4656	17	FSM	ENSG00000107937.19	ENST00000360803.9	4656	17	0	0	0	0	multi-exon	FALSE	canonical	2	410	junction_14	89.7620987666844	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTTCTTTGGTAAT	-15	True	NA	NA	False	AATAAA	-23	NA	988433	1019932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419_1010521_1012464_1012663_1014246_1014313_1015752_1015897_1017074
transcript_1054.nic	chr1	+	1802	9	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	29.0247739009282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	NA	False	NA	9	True	AATAAA	-18	NA	19312281	19329284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_10552.known	chr10	-	2739	5	FSM	ENSG00000067064.12	ENST00000381344.8	2739	5	0	0	0	0	multi-exon	TRUE	canonical	3	495	junction_4	187.27302929146	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACTCCTTTAAG	-1	True	NA	NA	False	AATATA	-23	NA	1049119	1039418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1043998_1044172_1048863
transcript_10553.known	chr10	-	1066	4	FSM	ENSG00000067064.12	ENST00000491735.1	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_3	301.602755660856	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACATACTTATGGGAAA	7602	False	NA	-12	True	AATAAA	-19	NA	1049103	1040902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1048863
transcript_10559.known	chr10	+	5137	14	FSM	ENSG00000047056.17	ENST00000263150.9	5137	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	14.2376282846406	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTCATCCCTCATCA	-17	True	NA	NA	False	ATTAAA	-14	NA	1056384	1132372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_1056969_1072115_1072294_1077906_1078004_1080010_1080107_1080411_1080477_1084402_1084539_1086285_1086358_1093451_1093497_1096169_1096247_1103601_1103837_1105125_1105268_1124217_1124353_1124909_1125025_1129212
transcript_10564.known	chr10	-	3427	27	FSM	ENSG00000107959.17	ENST00000224949.9	3427	27	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	15.7659002111347	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	0	True	NA	-4	True	AATAAA	-18	NA	3172782	3137727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10567.known	chr10	-	3242	25	FSM	ENSG00000107959.17	ENST00000678436.1	3242	25	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	30.6661005382527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTTAACCTCTGCT	NA	False	NA	-16	True	AATAAA	-6	NA	3172807	3137739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10570.known	chr10	+	2626	22	FSM	ENSG00000067057.18	ENST00000381125.9	2626	22	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	86.885751345362	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCTGTTTTAGTTTT	17	True	NA	34	True	ATTAAA	-20	NA	3067547	3136802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_3067708_3082387_3082462_3099274_3099353_3101364_3101555_3103778_3103945_3105114_3105160_3105392_3105502_3107213_3107310_3108700_3108794_3109354_3109481_3112221_3112287_3113118_3113189_3113371_3113519_3116775_3116847_3118781_3118870_3119891_3120045_3129818_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
transcript_10574.known	chr10	-	5703	23	FSM	ENSG00000107959.17	ENST00000678050.1	5703	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	34.8275562979367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGACTTAACCTCTGC	NA	False	NA	-17	True	AATAAA	-5	NA	3172824	3137740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3138125_3138234_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165524_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10575.known	chr10	-	1844	15	FSM	ENSG00000107959.17	ENST00000430362.2	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	14.9974487626314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGAGTCATGTCTTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	3172807	3151175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10579.nic	chr10	+	1884	3	ISM	ENSG00000067057.18	ENST00000381125.9	2626	22	-47	35925	-47	-677	5prime_fragment	FALSE	canonical	3	369	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCCCCTGGCCCCAG	1	True	NA	NA	False	TTTAAA	-38	NA	3067500	3100877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_3067708_3082387_3082462_3099274
transcript_10580.known	chr10	-	3487	27	FSM	ENSG00000107959.17	ENST00000380989.6	3487	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	32.6896831525695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGCTTGAGTCATTA	NA	False	NA	-6	True	AATAAA	-16	NA	3172841	3137729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148167_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_10581.known	chr10	-	4590	4	FSM	ENSG00000067082.15	ENST00000497571.6	4590	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	5.73488351136175	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTACATCTCTTTTT	-3	True	NA	NA	False	AATAAA	-18	NA	3785209	3775995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_3779591_3780105_3780230_3781640_3782215_3784912
transcript_10585.nnic	chr10	+	1427	10	NIC	ENSG00000196139.14	novel	1405	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	33.5706367875408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	-2	True	NA	14	True	AATAAA	-21	NA	5035338	5107686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_5035617_5077899_5077978_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_10586.nic	chr10	+	1349	9	NIC	ENSG00000196139.14	novel	859	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.631221018985	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	-2	True	NA	14	True	AATAAA	-21	NA	5035338	5107686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_5035617_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_10587.known	chr10	+	1186	9	FSM	ENSG00000196139.14	ENST00000380554.5	1186	9	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_6	9.75881012214092	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	-6	True	NA	14	True	AATAAA	-21	NA	5094413	5107686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_5094529_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_10588.known	chr10	+	3253	10	FSM	ENSG00000173848.19	ENST00000380359.3	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	88.6609577666448	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGAAGGTTTCTTGC	-1	True	NA	17	True	ATTAAA	-23	NA	5446610	5458463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_10590.known	chr10	+	8626	21	FSM	ENSG00000108021.20	ENST00000328090.9	8626	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5482912416419	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTGCAATGATTTT	-6	True	NA	5	True	AATAAA	-16	NA	5684837	5763740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_5685176_5712822_5712919_5717658_5717751_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5735303_5735547_5739617_5740498_5742096_5742527_5746178_5750028_5756612_5756739_5757519_5757674_5758886_5758993_5761289_5761472_5762531_5762647_5763028
transcript_10593.known	chr10	-	2297	11	FSM	ENSG00000057608.17	ENST00000380191.9	2297	11	0	0	0	0	multi-exon	FALSE	canonical	3	1920	junction_7	100.322679390056	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGTGTTGGTTTGTG	-4	True	NA	-5	True	AATAAA	-19	NA	5813434	5765222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5794884_5795020_5796762_5796863_5800597_5800706_5813213
transcript_10595.known	chr10	-	1408	10	FSM	ENSG00000057608.17	ENST00000380181.7	1408	10	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	602.13306023023	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATATAATGAAATCAATA	19	False	NA	60	True	TTTAAA	-14	NA	5813411	5765953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5796762_5796863_5800597_5800706_5813213
transcript_106.known	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4003_+_0_4000
transcript_10602.known	chr10	+	3640	22	FSM	ENSG00000134452.20	ENST00000397269.7	3640	22	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_17	71.2731006431139	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGTGTGATGTCTGCG	606	False	NA	9	True	ATTAAA	-22	NA	5890202	5937594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5924750_5924802_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_10604.known	chr10	+	927	5	FSM	ENSG00000134453.16	ENST00000476706.5	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	361.332603012792	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTGTTTCTCTTTT	NA	False	NA	40	True	TATAAA	-33	NA	6112701	6115766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_10605.known	chr10	-	3255	18	FSM	ENSG00000065675.16	ENST00000263125.10	3255	18	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_14	20.1320897589466	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTAATCGTTTAC	-9	True	NA	-10	True	AATAAA	-11	NA	6580276	6427147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_10610.known	chr10	+	1263	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	6	False	NA	NA	False	AAAAAG	-28	NA	6580561	6584508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6580928_6582137_6582202_6583675
transcript_10611.known	chr10	+	1254	2	FSM	ENSG00000237943.8	ENST00000667809.1	1254	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCTCCTCTTGGGGAG	0	True	NA	NA	False	NA	NA	NA	6580555	6584557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6580928_6583675
transcript_10613.nnic	chr10	+	557	4	NNC	ENSG00000285988.1	novel	614	4	NA	NA	62868	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	7.07106781186548	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCACCGTGATTTATT	NA	False	NA	6	True	AATACA	-20	NA	6800285	6840712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_6800440_6833642_6833689_6837973_6838009_6840390
transcript_10615.known	chr10	+	2529	2	FSM	ENSG00000223784.2	ENST00000650334.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTTTACTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	6737275	6740532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_6737629_6738356
transcript_10619.nnic	chr10	-	1599	14	NNC	ENSG00000151657.12	novel	6360	13	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.4202070594426	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAAAGTGTTTTATCTA	NA	False	NA	-24	True	ATTAAA	-8	NA	7788027	7755813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_7756143_7759889_7759991_7761390_7761448_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_1062.known	chr1	+	1548	8	FSM	ENSG00000040487.13	ENST00000400548.6	1548	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	33.3589017584604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	26	False	NA	25	True	AATAAA	-34	NA	19312340	19329300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_10622.known	chr10	-	6360	13	FSM	ENSG00000151657.12	ENST00000379562.9	6360	13	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_12	18.4185519397035	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATTACTCAGAAATGG	-20	True	NA	2	True	AATAAA	-21	NA	7787993	7750961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_10626.nnic	chr10	-	1427	12	NIC	ENSG00000151657.12	novel	6360	13	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	54.6378006164079	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAAAGTGTTTTATCTA	NA	False	NA	-24	True	ATTAAA	-8	NA	7788007	7755813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7787819
transcript_10628.nic	chr10	-	892	8	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-34	18254	-34	-7983	5prime_fragment	FALSE	canonical	3	164	junction_7	20.071301473924	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTTTATGGATTGCGT	NA	False	NA	0	True	AAAAAG	-28	NA	7788027	7769215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_10630.known	chr10	+	1101	10	FSM	ENSG00000165629.20	ENST00000356708.12	1101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	806.838549180965	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	1	True	NA	NA	False	AATAAA	-16	NA	7788176	7807801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_10631.known	chr10	+	1078	9	FSM	ENSG00000165629.20	ENST00000335698.4	1078	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1108.00450557523	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATAAGAACAATAGATA	1	True	NA	NA	False	AATAAA	-30	NA	7788176	7807815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7807658
transcript_10636.known	chr10	+	1096	9	FSM	ENSG00000165629.20	ENST00000493053.5	1096	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1063.86168626377	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	42	False	NA	NA	False	AATAAA	-16	NA	7788146	7807801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_1064.known	chr1	+	1512	8	FSM	ENSG00000040487.13	ENST00000469076.5	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	37.6210969905917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	15	True	NA	9	True	AATAAA	-18	NA	19312329	19329284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_10642.known	chr10	+	782	4	FSM	ENSG00000165629.20	ENST00000472202.1	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	2477	junction_2	154.756439463938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAGAATATAAAACAG	21	False	NA	NA	False	AATAAA	-2	NA	7788209	7799550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989
transcript_10643.known	chr10	+	292	4	FSM	ENSG00000165629.20	ENST00000465936.5	292	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1140.0679316992	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAATCATTGTTTTTC	3	True	NA	NA	False	AATAAA	-8	NA	7788178	7807793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7788264_7796120_7796156_7806973_7807011_7807658
transcript_10644.known	chr10	+	4875	7	FSM	ENSG00000165632.9	ENST00000344293.6	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.67646212197547	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	-11	True	NA	10	True	AATAAA	-20	NA	7818504	8016631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_7818876_7824317_7824561_7963919_7965743_7977240_7977324_8009077_8009331_8013730_8013838_8014636
transcript_10651.known	chr10	-	710	4	FSM	ENSG00000225383.8	ENST00000446372.3	710	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	-10	True	NA	1	True	AATAAA	-21	NA	10794929	10784436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_10784670_10786644_10786736_10792371_10792526_10794697
transcript_10653.nic	chr10	+	2457	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_10	25.9603703440911	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATACAAAAAAAAAAAAAAG	-38	True	NA	16	True	NA	NA	NA	11018046	11331277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_10654.nic	chr10	+	2469	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	19.6718643885299	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATACAAAAAAAAAAAAAAG	-38	True	NA	16	True	NA	NA	NA	11018046	11331277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_10658.known	chr10	+	8044	14	FSM	ENSG00000048740.19	ENST00000417956.6	8044	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.9475346095741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCGGAGTGCATTTTA	56	False	NA	NA	False	AATAAA	-19	NA	11165029	11336675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_10662.known	chr10	+	1892	14	FSM	ENSG00000048740.19	ENST00000608830.5	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	37.7641387762887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAAGTCAATGTGAAA	11	False	NA	NA	False	NA	NA	NA	11165139	11330639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_10668.known	chr10	-	5168	22	FSM	ENSG00000151461.20	ENST00000357604.10	5168	22	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_17	18.3540390186825	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCGTGGTGTTGTTT	-8	True	NA	-5	True	AATAAA	-14	NA	12042809	11920021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042754
transcript_10669.known	chr10	-	5369	22	FSM	ENSG00000151461.20	ENST00000397053.6	5369	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	49.629694497989	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTGGCGTGGTGTTGTT	63	False	NA	-6	True	AATAAA	-13	NA	12043170	11920022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042913
transcript_10671.nic	chr10	-	3332	3	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-22	106631	-22	8406	5prime_fragment	FALSE	canonical	3	218	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTTATAGGAATTT	402	False	NA	NA	False	NA	NA	NA	12042831	12026652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_12029525_12035058_12035442_12042754
transcript_10672.nic	chr10	-	533	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-95	115037	-95	0	5prime_fragment	FALSE	canonical	3	218	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGTTGATTGTATT	329	False	NA	0	True	NA	NA	NA	12042904	12035058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_12035442_12042754
transcript_10673.nic	chr10	-	464	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-95	115106	-95	-69	5prime_fragment	FALSE	canonical	3	218	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAGAGAAAGAAGCAAG	329	False	NA	4	True	AAAAAG	-29	NA	12042904	12035127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_12035442_12042754
transcript_10674.nic	chr10	-	332	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-34	115177	-34	-140	5prime_fragment	FALSE	canonical	3	218	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAGAAAAGGTGAAGGC	12	True	NA	39	True	AAAAAG	-25	NA	12042843	12035198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_12035442_12042754
transcript_10675.known	chr10	+	5173	17	FSM	ENSG00000181192.12	ENST00000263035.9	5173	17	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_3	17.2898091371767	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACTCCTGGACTTCT	0	True	NA	21	True	AATAAA	-22	NA	12068953	12123221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_1069.known	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_8	206.212269276103	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-11	True	NA	-23	True	AATAAA	-21	NA	19485539	19338774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_10691.known	chr10	+	2495	12	FSM	ENSG00000065665.21	ENST00000298428.14	2495	12	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	12.2332699047304	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTAAGATCATTTGT	-5	True	NA	5	True	AATAAA	-17	NA	12129676	12165407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12164267
transcript_10693.known	chr10	+	2030	12	FSM	ENSG00000065665.21	ENST00000304267.12	2030	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	44.3649403683167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTGTCTGCTTCTTTC	19	True	NA	NA	False	AATAAA	-14	NA	12129700	12169956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12169257
transcript_10696.known	chr10	+	2252	11	FSM	ENSG00000065665.21	ENST00000379020.8	2252	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	48.0438341517411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGATCATTTGTATAGG	-1	True	NA	10	True	AATAAA	-22	NA	12129726	12165412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12160929_12161122_12162212_12162290_12164267
transcript_10699.known	chr10	-	919	11	FSM	ENSG00000165609.13	ENST00000378937.7	919	11	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_8	530.605550291363	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGTGGTGGTATGGAA	6	True	NA	-13	True	AATAAA	-12	NA	12195822	12167575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184493_12184533_12184888_12184957_12186228_12186333_12195769
transcript_1070.known	chr1	-	1462	9	FSM	ENSG00000077549.19	ENST00000433834.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	601.966361186404	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCTCCGAGCCTGC	979	False	NA	-29	True	AATAAA	-15	NA	19484664	19339358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19484189
transcript_10702.known	chr10	-	1201	10	FSM	ENSG00000165609.13	ENST00000537776.5	1201	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	427.931141339813	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTGGTGGTATGGA	-31	True	NA	-14	True	AATAAA	-11	NA	12196144	12167576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_12167812_12170716_12170771_12170899_12170913_12172768_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_10706.known	chr10	-	1126	10	FSM	ENSG00000165609.13	ENST00000378940.7	1126	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	426.886690953911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGTGATTTCTTTGG	0	True	NA	-45	True	NA	NA	NA	12195869	12169721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_12170157_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_10720.known	chr10	+	1321	13	FSM	ENSG00000151465.14	ENST00000281141.9	1321	13	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_7	193.290135260155	3350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	-20	True	NA	52	True	AATAAA	-18	NA	12196187	12250589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
transcript_10721.known	chr10	+	8088	11	FSM	ENSG00000183049.14	ENST00000619168.5	8088	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	9.4175368329516	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTCATTTCCTCTGTCA	-13	True	NA	14	True	AATAAA	-19	NA	12349546	12835545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_12349911_12553224_12553357_12666735_12666811_12760947_12761087_12769672_12769800_12791157_12791234_12814194_12814308_12816249_12816329_12824464_12824553_12825572_12825691_12828768
transcript_10724.known	chr10	+	3488	16	FSM	ENSG00000123240.17	ENST00000378752.7	3488	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	45.8255629776899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	38	True	NA	7	True	ATTAAA	-2	NA	13100172	13138291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10726.known	chr10	+	3479	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	39.3132371122615	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	28	True	NA	24	True	ATTAAA	-19	NA	13100162	13138308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10729.known	chr10	+	3321	14	FSM	ENSG00000123240.17	ENST00000378757.6	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	22.5060149750944	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	34	True	NA	24	True	ATTAAA	-19	NA	13100168	13138308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10730.nic	chr10	+	1960	14	NIC	ENSG00000123240.17	novel	3488	16	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_5	27.9202160009277	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCTTTTGTGTTATT	-8	True	NA	7	True	NA	NA	NA	13100126	13136923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10737.nnic	chr10	+	2282	12	NIC	ENSG00000123240.17	novel	3321	14	NA	NA	-32	0	intron_retention	FALSE	canonical	3	10	junction_4	34.6884599859715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCTTTTGTGTTATT	-8	True	NA	7	True	NA	NA	NA	13100126	13136923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_10740.known	chr10	+	3157	20	FSM	ENSG00000065328.17	ENST00000484800.6	3157	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	56.0913382541976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCAGTTTTCTCATCTG	13	True	NA	-92	True	NA	NA	NA	13161578	13209736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172624_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
transcript_10745.nic	chr10	+	2449	17	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-32	9635	-32	-397	5prime_fragment	TRUE	canonical	3	211	junction_4	34.4129336151395	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAAAGATGAGAAAC	NA	False	NA	NA	False	AAAAAG	-7	NA	13161525	13201475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420
transcript_10749.nic	chr10	+	634	3	ISM	ENSG00000065328.17	ENST00000484800.6	3157	20	-53	38344	-32	-1082	5prime_fragment	FALSE	canonical	3	229	junction_1	71.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAATTATATGAGT	NA	False	NA	NA	False	GATAAA	-24	NA	13161525	13171392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_13161607_13164127_13164210_13170921
transcript_10750.known	chr10	-	870	5	FSM	ENSG00000165623.10	ENST00000378681.8	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.9749371855331	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTATTATCTTCTCAA	-1	True	NA	-4	True	AATAAA	-15	NA	13234374	13221765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13222201_13229610_13229710_13233537_13233634_13233734_13233801_13234200
transcript_10752.nnic	chr10	-	817	4	NIC	ENSG00000165623.10	novel	870	5	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	8.2192186706253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTATTATCTTCTCAA	NA	False	NA	-4	True	AATAAA	-15	NA	13234417	13221765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_13222201_13229610_13229710_13233734_13233801_13234200
transcript_10753.known	chr10	-	1541	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	33.6414922380087	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-3	True	NA	-7	True	AATAAA	-20	NA	13300064	13277798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_1076.known	chr1	-	2063	8	FSM	ENSG00000077549.19	ENST00000482808.2	2063	8	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_7	201.103993810493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGTGAAAGAGAGAAGAAA	-9	True	NA	34	True	AAAACA	-26	NA	19485537	19339136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19339618_19344357_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_10762.nnic	chr10	-	1277	7	NIC	ENSG00000107537.14	novel	1541	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	155.840374172492	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-3	True	NA	-7	True	AATAAA	-20	NA	13300064	13277798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_13278355_13280975_13281111_13283689_13283840_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_10768.known	chr10	-	3265	9	FSM	ENSG00000086475.15	ENST00000327347.10	3265	9	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_8	306.489294266537	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	0	True	NA	-21	True	AATAAA	-29	NA	13348293	13317427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_10779.known	chr10	-	2387	8	FSM	ENSG00000086475.15	ENST00000378614.8	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1178.32149730895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	13	True	NA	-18	True	AATAAA	-17	NA	13348280	13318079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13319357_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_10780.known	chr10	-	2988	8	FSM	ENSG00000086475.15	ENST00000545675.5	2988	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	1170.8314157391	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGATAAACCTACTGTT	-5	True	NA	-32	True	AATAAA	-18	NA	13348298	13317438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13347999
transcript_10795.known	chr10	-	2731	3	FSM	ENSG00000151474.23	ENST00000492155.5	2731	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	13707757	13692168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_13694040_13701339_13701479_13707036
transcript_10801.nic	chr10	+	1673	11	NIC	ENSG00000165630.14	novel	1670	10	NA	NA	7	-137	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	46.9409203147957	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCTTTTATGTAATA	-27	True	NA	13	True	AGTAAA	-15	NA	13586945	13630722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_13587153_13591767_13591889_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397_13616554_13630259
transcript_10803.known	chr10	+	1670	10	FSM	ENSG00000165630.14	ENST00000378572.8	1670	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	14.4666495988976	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGTATAACTCAAATG	-8	True	NA	3	True	AATAGA	-19	NA	13586964	13630859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397_13616554_13630259
transcript_10808.nic	chr10	+	2110	9	ISM	ENSG00000165630.14	ENST00000378572.8	1670	10	-35	13301	-9	3498	5prime_fragment	FALSE	canonical	3	85	junction_1	15.1322296770833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTTAGCTTTAACAATA	5	False	NA	NA	False	ATTAAA	-31	NA	13586929	13617558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397
transcript_10817.known	chr10	-	2633	4	FSM	ENSG00000065809.14	ENST00000468747.5	2633	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	13.0979218029257	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTTAAGAAAGCATTTC	1008	False	NA	NA	False	NA	NA	NA	14604389	14519158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14521307_14521868_14522020_14530331_14530516_14604239
transcript_10819.known	chr10	+	1762	14	FSM	ENSG00000187522.16	ENST00000378372.8	1762	14	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_5	45.1892797676303	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCAACCCTTTGTTTT	-12	True	NA	24	True	ATTAAA	-18	NA	14838305	14871741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849720_14849812_14851218_14851324_14852369_14852532_14854124_14854281_14855840_14855944_14867082_14867296_14867735_14867910_14870596_14870668_14871527
transcript_10828.known	chr10	+	578	6	FSM	ENSG00000187522.16	ENST00000441647.1	578	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	172.40603237706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTGTCATTTTCTTCT	62	False	NA	8	True	AATAAA	-12	NA	14838436	14849668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849432
transcript_10830.known	chr10	+	4660	5	FSM	ENSG00000284024.4	ENST00000640019.3	4660	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	190.42895656911	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGGTCAGTCCACTAC	-12	True	NA	18	True	AATAAA	-18	NA	14838305	14846999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14842133_14842847_14843370
transcript_10833.known	chr10	+	1689	4	FSM	ENSG00000284024.4	ENST00000645667.1	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	214.495273193192	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTCATATTATTTG	-16	True	NA	21	True	ATTAAA	-14	NA	14838301	14844737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14843370
transcript_10836.known	chr10	-	1390	4	FSM	ENSG00000185267.10	ENST00000465530.2	1390	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTTAATGCTATTTTA	-10	True	NA	NA	False	ATTAAA	-38	NA	14838037	14819244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14820159_14825478_14825621_14828144_14828273_14837831
transcript_10837.known	chr10	-	999	1	FSM	ENSG00000272853.1	ENST00000609399.1	999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAGCCGTCTTAAA	15	False	14878701	NA	False	ATTAAA	-33	NA	14878686	14877687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14877700_14878700
transcript_10838.known	chr10	-	2761	16	FSM	ENSG00000152457.18	ENST00000396817.6	2761	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	12.7940958605479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-1	True	NA	NA	False	NA	NA	NA	14954048	14908170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14942113_14942436_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_10839.known	chr10	-	2485	15	FSM	ENSG00000152457.18	ENST00000378254.5	2485	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	11.4374965149989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-1	True	NA	NA	False	NA	NA	NA	14954048	14908170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14945434_14945566_14949035_14949088_14953901
transcript_10840.known	chr10	-	2463	15	FSM	ENSG00000152457.18	ENST00000378258.5	2463	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	9.63332862556672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	15	True	NA	NA	False	NA	NA	NA	14954072	14908170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_10844.known	chr10	-	5960	14	FSM	ENSG00000152457.18	ENST00000378278.7	5960	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	7.06688250944975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTACTGAAAATAGTC	-9	True	NA	NA	False	AATAAA	-16	NA	14954096	14904612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_10848.known	chr10	-	2637	13	FSM	ENSG00000152457.18	ENST00000378246.6	2637	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	9.91071249821234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	14954095	14907878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_10850.known	chr10	+	1292	6	FSM	ENSG00000152455.16	ENST00000378325.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	76.9716831048925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	-3	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14878920_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_10851.known	chr10	+	3059	6	FSM	ENSG00000152455.16	ENST00000354919.11	3059	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	70.9608342679256	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	0	True	NA	NA	False	NA	NA	NA	14878865	14904315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14878920_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_10853.known	chr10	+	719	6	FSM	ENSG00000152455.16	ENST00000433779.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	87.1242790501017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTCAGAACAGTATGTAAA	-18	True	NA	NA	False	AAAAAG	-2	NA	14878847	14902456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14878961_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_10854.nic	chr10	+	1873	6	NIC	ENSG00000152455.16	novel	1292	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	86.4050924425175	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	-3	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_14878961_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_10856.known	chr10	+	2959	5	FSM	ENSG00000152455.16	ENST00000378331.5	2959	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	36.0442436458306	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	19	False	NA	NA	False	NA	NA	NA	14878819	14904315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_14878920_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_1086.known	chr1	-	1686	10	FSM	ENSG00000077549.19	ENST00000375142.5	1686	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	712.994225384819	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	-1	True	NA	6	True	AAGAAA	-36	NA	19485485	19338822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19339618_19342751_19342865_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_10860.nic	chr10	+	1724	5	NIC	ENSG00000152455.16	novel	3059	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	92.1968003783212	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	0	True	NA	9	True	ATTAAA	-9	NA	14878865	14903085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_14878961_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_10864.nnic	chr10	-	1507	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-36	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.1441897190766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8831	False	NA	-3	True	ATTAAA	-21	NA	15088812	15075474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15075820_15077718_15078604_15078690_15078754_15078922_15079041_15088716
transcript_10865.nnic	chr10	-	1507	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-36	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.1441897190766	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8831	False	NA	-3	True	ATTAAA	-21	NA	15088812	15075474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15075900_15077798_15078604_15078690_15078754_15078922_15079041_15088716
transcript_10867.nnic	chr10	-	1507	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-36	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.1441897190766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8831	False	NA	-3	True	ATTAAA	-21	NA	15088812	15075474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15075907_15077805_15078604_15078690_15078754_15078922_15079041_15088716
transcript_10869.nnic	chr10	-	1072	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-36	-1030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.1441897190766	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAAGTCTGTCCATAGC	8831	False	NA	NA	False	AAAACA	-29	NA	15088812	15076504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15076551_15077854_15078604_15078690_15078754_15078922_15079041_15088716
transcript_1087.known	chr1	+	669	5	FSM	ENSG00000173436.15	ENST00000498642.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	2271.5250383828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGGTGGTCTTAA	31	True	NA	-33	True	NA	NA	NA	19597040	19626587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19625391_19625633_19626386
transcript_10870.known	chr10	-	3370	4	FSM	ENSG00000176244.7	ENST00000356189.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	2.16024689946929	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-1	True	NA	-3	True	ATTAAA	-21	NA	15088776	15075474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15078604_15078690_15078754_15078922_15079041_15088716
transcript_10873.known	chr10	-	2457	13	FSM	ENSG00000152465.18	ENST00000378150.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	25.3227774060342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCTGAGAGG	7	True	NA	NA	False	NA	NA	NA	15168628	15108293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
transcript_10877.nic	chr10	-	1883	12	NIC	ENSG00000152465.18	novel	5003	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	20.1178346928111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTAGGACTTTACTTCC	-6	True	NA	16	True	AGTAAA	-33	NA	15168693	15106372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_15106699_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_10879.known	chr10	-	5003	12	FSM	ENSG00000152465.18	ENST00000378165.9	5003	12	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_4	8.96826360373711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAGTTTCTTGTAGATT	-6	True	NA	NA	False	ATTAAA	-45	NA	15168693	15105769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_1088.known	chr1	+	438	5	FSM	ENSG00000173436.15	ENST00000485362.1	438	5	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_1	2256.8091827844	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTAAACAAAAAGAG	60	False	NA	-14	True	NA	NA	NA	19597069	19626606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19597833_19597854_19622099_19622148_19623473_19623584_19626386
transcript_10885.nnic	chr10	+	1119	3	NIC	ENSG00000152464.15	novel	1484	3	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	61	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATAGGGTCCTGTTTGGT	-14	True	NA	14	True	AATAAA	-21	NA	15097351	15104257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_15097399_15102217_15102337_15103304
transcript_10886.known	chr10	+	1296	3	FSM	ENSG00000152464.15	ENST00000378203.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	36.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	-11	True	NA	8	True	AATAAA	-15	NA	15097179	15104251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_15097410_15102217_15102337_15103304
transcript_10887.known	chr10	+	1030	2	FSM	ENSG00000152464.15	ENST00000378202.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATAGGGTCCTGTTTG	83	False	NA	12	True	AATAAA	-19	NA	15097330	15104255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_15097410_15103304
transcript_10889.nnic	chr10	-	2532	16	NNC	ENSG00000148481.14	novel	2364	15	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.6519959644468	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	NA	False	NA	-4	True	AATAAA	-16	NA	15860546	15778173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_15779142_15780837_15780967_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_1089.known	chr1	+	583	5	FSM	ENSG00000173436.15	ENST00000467029.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	2224.7463900409	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCCATTGCATGGC	-9	True	NA	3	True	AATAAA	-12	NA	19597000	19626623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19617257_19617337_19622099_19622148_19623473_19623584_19626386
transcript_10891.known	chr10	-	2364	15	FSM	ENSG00000148481.14	ENST00000277632.8	2364	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_11	13.2003787824441	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	-18	True	NA	-4	True	AATAAA	-16	NA	15860507	15778173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_10893.known	chr10	-	2307	14	FSM	ENSG00000148481.14	ENST00000477891.1	2307	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	20.9866116803663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCATTTTTTACATT	-9	True	NA	0	True	AATAAA	-20	NA	15860498	15778169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_10897.nnic	chr10	-	1642	14	NIC	ENSG00000148481.14	novel	2364	15	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	21.6633740481008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATATGTTTAAATTAT	NA	False	NA	-15	True	ATTAAA	-17	NA	15860546	15778853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_109.known	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_17	3130.11688429403	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
transcript_1090.known	chr1	+	657	5	FSM	ENSG00000173436.15	ENST00000481464.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2270.05534073511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	29	True	NA	9	True	AATAAA	-18	NA	19597038	19626629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19600786_19600972_19622099_19622148_19623473_19623584_19626386
transcript_10904.known	chr10	+	3777	6	FSM	ENSG00000165983.15	ENST00000378000.5	3777	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0724932822114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATCTAAATGTATT	12	False	NA	NA	False	AATAAA	-15	NA	16436983	16513737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_16437048_16437356_16437491_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_10908.nnic	chr10	+	2076	6	NNC	ENSG00000165983.15	novel	3777	6	NA	NA	-20	-1666	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	19.9739830779942	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAATGTTTGCCTTATGT	NA	False	NA	NA	False	NA	NA	NA	16436963	16512071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_16437048_16467131_16467211_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_10909.nnic	chr10	+	1663	5	NIC	ENSG00000165983.15	novel	3777	6	NA	NA	9	-1666	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.0328663106743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAATGTTTGCCTTATGT	NA	False	NA	NA	False	NA	NA	NA	16436951	16512071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_16437048_16437356_16437491_16486351_16486618_16505019_16505161_16511045
transcript_10910.known	chr10	+	3625	5	FSM	ENSG00000165983.15	ENST00000535784.7	3625	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.8857705285386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	1	True	NA	NA	False	AATAAA	-23	NA	16437009	16513745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_16437048_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_10912.known	chr10	+	3212	4	FSM	ENSG00000165983.15	ENST00000423462.6	3212	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	18.1169043222683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	NA	False	NA	NA	False	AATAAA	-23	NA	16436942	16513745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_16437048_16486351_16486618_16505019_16505161_16511045
transcript_10914.known	chr10	-	3730	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_7	75.5033111856692	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTCATGGTATATT	-25	True	NA	1	True	ATTAAA	-24	NA	16817424	16590610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
transcript_10918.known	chr10	-	955	8	FSM	ENSG00000148484.18	ENST00000377911.1	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_7	173.368311489071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGCTGCGTGTGAGGC	73	False	NA	-24	True	AATAAA	-1	NA	16817463	16593312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
transcript_10928.known	chr10	-	12918	11	FSM	ENSG00000107614.22	ENST00000377799.8	12918	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	33.6881284728018	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGTCAAGGACTTCG	-12	True	NA	NA	False	AATAAA	-20	NA	17201672	17137335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
transcript_1093.known	chr1	+	3723	4	FSM	ENSG00000173436.15	ENST00000322753.7	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	4480	junction_2	66.016832870278	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGACTCCATGGCGCT	-31	True	NA	16	True	AATAAA	-22	NA	19596978	19629820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19626386
transcript_10935.nic	chr10	-	2514	11	NIC	ENSG00000107614.22	novel	1697	10	NA	NA	0	715	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	67.2059521173534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCCTGTCCTCATGAG	-12	True	NA	NA	False	AATAAA	-41	NA	17201672	17150698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_17152100_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
transcript_10948.nic	chr10	-	1321	9	NIC	ENSG00000107614.22	novel	12918	11	NA	NA	-40	81	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	69.8959047441265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTATGGAGAGTATATT	NA	False	NA	36	True	TATAAA	-17	NA	17201712	17148834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17168840_17168918_17174550_17174661_17201570
transcript_10960.nnic	chr10	-	444	3	NNC	ENSG00000107614.22	novel	12918	11	NA	NA	-11	-821	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	111.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCTTTTATATTTATC	-23	True	NA	1	True	ATTAAA	-36	NA	17201683	17172728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_17172950_17174550_17174661_17201570
transcript_10961.nic	chr10	-	997	2	ISM	ENSG00000107614.22	ENST00000479046.1	711	3	371	1869	-11	-1869	5prime_fragment	FALSE	canonical	3	237	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATTGTGTTGTTTC	-23	True	NA	NA	False	NA	NA	NA	17201683	17173776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_17174661_17201570
transcript_10964.nic	chr10	+	1414	8	ISM	ENSG00000026025.16	ENST00000224237.9	1868	9	1118	0	-213	0	3prime_fragment	FALSE	canonical	3	597	junction_1	86.0206429899717	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	196	False	NA	25	True	AATAAA	-16	NA	17230395	17237593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
transcript_10967.known	chr10	-	2234	7	FSM	ENSG00000165996.14	ENST00000361271.8	2234	7	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_3	18.3363633859668	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCATAACTGCCTT	6	True	NA	NA	False	AATAAA	-39	NA	17617374	17589031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_17590447_17594204_17594384_17599289_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_1097.known	chr1	+	3678	3	FSM	ENSG00000173436.15	ENST00000617872.4	3678	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2255	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGACTCCATGGCGCTT	-33	True	NA	17	True	AATAAA	-23	NA	19596976	19629821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19623473_19623584_19626386
transcript_10970.known	chr10	-	2595	1	FSM	ENSG00000260589.1	ENST00000563601.1	2595	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTCATGCCTGT	329	False	NA	NA	False	ATTAAA	-19	NA	17643878	17641283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_17641300_17643900
transcript_10972.known	chr10	+	3856	14	FSM	ENSG00000136738.15	ENST00000377524.8	3856	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	18.8808158483841	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTGTTAGTTTAT	-15	True	NA	NA	False	TATAAA	-26	NA	17644150	17716824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221_17693313_17695048_17695242_17696774_17696870_17700190_17700280_17704430_17704519_17704969_17705025_17705587_17705742_17708775_17708952_17714542
transcript_10973.nnic	chr10	+	2853	13	NIC	ENSG00000136738.15	novel	3856	14	NA	NA	4	-914	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	56.9653891021167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACATTCCTGGCTTTGCT	-11	True	NA	21	True	ATTAAA	-29	NA	17644154	17715910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_17644380_17684674_17684751_17684831_17684928_17688026_17688174_17693221_17693313_17695048_17695242_17696774_17696870_17700190_17700280_17704430_17704519_17704969_17705025_17705587_17705742_17708775_17708952_17714542
transcript_10974.known	chr10	+	740	7	FSM	ENSG00000136738.15	ENST00000445846.1	740	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	101.030385968227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAGAAGAAGA	0	True	NA	NA	False	NA	NA	NA	17644207	17693281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_17644380_17660463_17660549_17672974_17673079_17684674_17684751_17684831_17684928_17688026_17688174_17693221
transcript_10975.nic	chr10	+	713	6	ISM	ENSG00000136738.15	ENST00000377524.8	3856	14	-20	23543	-20	0	5prime_fragment	FALSE	canonical	3	195	junction_4	14.5794375748861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAGAAGAAGA	-2	True	NA	NA	False	NA	NA	NA	17644130	17693281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221
transcript_10978.known	chr10	-	2166	11	FSM	ENSG00000241058.4	ENST00000377304.7	2166	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	13.1011449881299	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTATGAAAAGTTGTT	26	True	NA	-10	True	AATAAA	-15	NA	18651587	18545560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
transcript_1098.known	chr1	+	481	2	FSM	ENSG00000173436.15	ENST00000498067.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACAGTCAAGTGATTTG	-19	True	NA	NA	False	AATAAA	-42	NA	19596990	19598195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19597110_19597833
transcript_10982.known	chr10	+	1761	12	FSM	ENSG00000204740.11	ENST00000377265.3	1761	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.21287855128421	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCTTGTTTTTCTTTG	16	True	NA	NA	False	AATAAA	-15	NA	19489093	19734476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_19489174_19491516_19491646_19498484_19498647_19531193_19531352_19567501_19567704_19595193_19595458_19607776_19607903_19615856_19615924_19692281_19692362_19692457_19692555_19730705_19730782_19734156
transcript_10985.known	chr10	+	12275	14	FSM	ENSG00000120594.17	ENST00000377252.5	12275	14	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	19.6938100388461	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTGTCTTTATG	-1	True	NA	36	True	ATTAAA	-41	NA	19816431	20289856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467_20164568_20176998_20177095_20177327_20177410_20211668_20211730_20217425_20217577_20219063_20219103_20245344_20245506_20279702
transcript_1099.known	chr1	+	2024	4	FSM	ENSG00000158747.15	ENST00000375136.8	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	7.07106781186548	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCCTCCTCACTGA	-15	True	NA	24	True	AATAAA	-14	NA	19644310	19658452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19644447_19655011_19655201_19655323_19655436_19656865
transcript_10998.nic	chr10	+	1624	11	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	67	69930	-46	214	5prime_fragment	FALSE	canonical	3	36	junction_1	17.6759723919223	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAATAAACAAAGT	-2	True	NA	NA	False	AAGAAA	-19	NA	21534298	21673700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349
transcript_10999.nic	chr10	+	1691	11	NIC	ENSG00000078403.17	novel	5203	26	NA	NA	-26	214	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	20.7374058165432	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAATAAACAAAGT	-38	True	NA	NA	False	AAGAAA	-19	NA	21534205	21673700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349
transcript_11.known	ERCC-00034	+	1003	1	FSM	ERCC-00034A	DQ855001	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00034_+_0_1000
transcript_1100.known	chr1	+	455	1	FSM	ENSG00000226396.1	ENST00000457263.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGATTCCTCAAAATATT	28	False	NA	NA	False	NA	NA	NA	19608113	19608568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_19608100_19608600
transcript_11004.nic	chr10	+	912	8	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	67	126432	-46	2274	5prime_fragment	FALSE	canonical	3	36	junction_1	19.8761471238718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAAAGTAAGTGGATT	-2	True	NA	NA	False	GATAAA	-13	NA	21534298	21617198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111
transcript_11005.nic	chr10	+	979	8	NIC	ENSG00000078403.17	novel	5203	26	NA	NA	-26	2274	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	23.8318942527334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAAAGTAAGTGGATT	-38	True	NA	NA	False	GATAAA	-13	NA	21534205	21617198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111
transcript_11007.nic	chr10	+	2035	6	ISM	ENSG00000078403.17	ENST00000495130.5	744	7	-186	15802	-41	1067	5prime_fragment	FALSE	canonical	2	6	junction_3	42.1739255939022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	3	True	NA	NA	False	AGTAAA	-13	NA	21534303	21596649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21557620_21557825_21586293_21586349_21595330
transcript_11009.nic	chr10	+	1930	5	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	-27	146981	-27	1067	5prime_fragment	FALSE	canonical	3	36	junction_1	26.1951808545007	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	-39	True	NA	NA	False	AGTAAA	-13	NA	21534204	21596649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_1101.known	chr1	-	608	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGAATTTCCCTCTC	-1	True	NA	NA	False	NA	NA	NA	19979618	19975672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
transcript_11010.nic	chr10	+	1903	5	ISM	ENSG00000078403.17	ENST00000650772.1	564	6	-234	15802	-26	1067	5prime_fragment	FALSE	canonical	3	24	junction_1	31.2839815240963	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	-38	True	NA	NA	False	AGTAAA	-13	NA	21534205	21596649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_11012.nic	chr10	+	1646	4	ISM	ENSG00000078403.17	ENST00000651097.1	573	6	-62	18275	-62	1067	5prime_fragment	FALSE	canonical	3	31	junction_1	30.408332191468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	6107	False	NA	NA	False	AGTAAA	-13	NA	21524583	21596649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_21524776_21538832_21538913_21586293_21586349_21595330
transcript_11013.known	chr10	+	1069	4	FSM	ENSG00000078403.17	ENST00000377100.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	31.0948370133836	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	-12	True	NA	18	True	AATAAA	-20	NA	21534231	21557182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21556642
transcript_11015.known	chr10	+	785	4	FSM	ENSG00000078403.17	ENST00000652497.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	33.7276675083759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTCACTTCTTCAAATG	14	False	NA	4	True	AATAAA	-6	NA	21534475	21557168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_21534495_21534644_21534805_21538832_21538913_21556642
transcript_11017.nnic	chr10	+	1107	3	NNC	ENSG00000078403.17	novel	573	6	NA	NA	428	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	411	False	NA	18	True	AATAAA	-20	NA	21535176	21557182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_21535664_21538832_21538913_21556642
transcript_11018.known	chr10	+	5143	23	FSM	ENSG00000078403.17	ENST00000307729.12	5143	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	26.6040759941805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	-12	True	NA	15	True	AATAAA	-19	NA	21534231	21743630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
transcript_11019.known	chr10	-	2100	12	FSM	ENSG00000136770.11	ENST00000376980.8	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	19.2731560844234	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-16	True	NA	-11	True	AATAAA	-15	NA	22003730	21756547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882440_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_1102.known	chr1	+	5562	2	FSM	ENSG00000162543.6	ENST00000375099.4	5562	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCTCACCTCGTGTTT	-10	True	NA	NA	False	AATAAA	-19	NA	20186095	20196050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_20186154_20190546
transcript_11020.nnic	chr10	-	1129	5	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	53413	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	79.4638282490845	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	NA	False	NA	-11	True	AATAAA	-15	NA	21807493	21756547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21807190
transcript_11021.known	chr10	+	3540	10	FSM	ENSG00000168283.14	ENST00000376663.8	3540	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	7.14056400580428	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTGAATTTAACTCAT	12	True	NA	6	True	AGTAAA	-20	NA	22321098	22331484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_22321697_22326430_22326562_22326889_22326987_22327594_22327651_22327741_22327793_22327949_22328059_22328133_22328180_22328599_22328699_22329047_22329129_22329212
transcript_11024.known	chr10	+	926	8	FSM	ENSG00000148444.16	ENST00000376836.8	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	3.22616851161035	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	-22	True	NA	13	True	AATAAA	-22	NA	22316387	22320306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318652_22318714_22318805_22318863_22318958_22319019_22319938
transcript_11026.known	chr10	+	757	6	FSM	ENSG00000148444.16	ENST00000444869.5	757	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	38.1051177665153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTGTTTTCCACAAAG	10	True	NA	-6	True	AATAAA	-3	NA	22316419	22320287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318958_22319019_22319938
transcript_11029.known	chr10	+	1344	4	FSM	ENSG00000148444.16	ENST00000468179.6	1344	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCTATTCATGATGAG	-11	True	NA	NA	False	AATAAA	-23	NA	22316398	22319281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271
transcript_1103.known	chr1	-	510	2	FSM	ENSG00000187980.7	ENST00000442226.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCTCACCGTGTGTG	773	False	NA	NA	False	TTTAAA	-38	NA	20186486	20184241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20184625_20186359
transcript_11032.known	chr10	+	2568	11	FSM	ENSG00000077327.16	ENST00000376624.8	2568	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.28254244210267	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATTGTCCTTTTCATT	4	True	NA	6	True	AATAAA	-20	NA	22345495	22417610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_22345637_22345722_22345819_22364852_22365020_22368494_22368679_22386753_22386960_22387822_22387997_22389159_22389313_22391728_22391921_22401160_22401278_22411030_22411177_22416618
transcript_11038.nic	chr10	-	1914	7	ISM	ENSG00000107863.20	ENST00000446003.5	3859	17	27	32192	20	0	5prime_fragment	FALSE	canonical	3	28	junction_6	22.9177272481855	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	24723213	24629013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_24630051_24633401_24633481_24635010_24635104_24666984_24667010_24670217_24670398_24721836_24722280_24723156
transcript_11039.known	chr10	-	1939	9	FSM	ENSG00000099256.19	ENST00000320152.11	1939	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	10.3319891598859	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTACTGTTTTTCT	-15	True	NA	-2	True	AATAAA	-26	NA	24952606	24848613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_24849892_24851387_24851465_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_11043.known	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	32.4276973520408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-1	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
transcript_11046.known	chr10	+	3737	3	FSM	ENSG00000185875.13	ENST00000376356.5	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	-19	True	NA	NA	False	ATTAAA	-16	NA	25016611	25026664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_25016693_25021741_25021909_25023175
transcript_11047.known	chr10	+	3788	3	FSM	ENSG00000185875.13	ENST00000524413.5	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	27	True	NA	NA	False	ATTAAA	-16	NA	25016657	25026664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_25016790_25021741_25021909_25023175
transcript_11048.known	chr10	-	2433	2	FSM	ENSG00000233642.1	ENST00000449643.1	2433	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	25176276	25158071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_25159904_25175675
transcript_11049.known	chr10	+	2723	8	FSM	ENSG00000095777.17	ENST00000376302.5	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	8.91227083456127	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAGCTTTATCGCTAA	-4	True	NA	NA	False	AATAAA	-15	NA	25934273	26023481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502
transcript_11050.known	chr10	-	3515	11	FSM	ENSG00000136754.18	ENST00000376140.4	3515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	129.493474739077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	-13	True	NA	-17	True	AATAAA	-22	NA	26860958	26746595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_11051.known	chr10	-	3515	10	FSM	ENSG00000136754.18	ENST00000376160.5	3515	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	76.6434747530553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	108	False	NA	-14	True	AATAAA	-25	NA	26860973	26746592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_11052.known	chr10	-	3516	10	FSM	ENSG00000136754.18	ENST00000376139.6	3516	10	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	61.9840680446034	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	110	False	NA	-14	True	AATAAA	-25	NA	26860971	26746592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_11055.known	chr10	-	3467	10	FSM	ENSG00000136754.18	ENST00000376137.8	3467	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	154.006333042781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-17	True	AATAAA	-22	NA	26861087	26746595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_11058.known	chr10	-	3441	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	105.91734690314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-3	True	NA	-14	True	AATAAA	-25	NA	26860986	26746592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_11059.nic	chr10	-	3216	9	NIC	ENSG00000136754.18	novel	3289	12	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	95.7104193648737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTGGATACTGTTAAA	21	False	NA	-9	True	AATAAA	-16	NA	26861060	26746894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_26748746_26751597_26751784_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_1106.known	chr1	-	812	2	FSM	ENSG00000162545.6	ENST00000489020.1	812	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAATGGTTCTGTGCAC	34	True	NA	NA	False	NA	NA	NA	20484645	20483186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20483720_20484366
transcript_11061.nic	chr10	-	2300	9	NIC	ENSG00000136754.18	novel	3503	10	NA	NA	27	-916	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	95.7104193648737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTCTATTTTCTCAA	21	False	NA	-9	True	AATAAA	-22	NA	26861060	26747810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_26748746_26751597_26751784_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_11067.known	chr10	-	6775	34	FSM	ENSG00000107890.17	ENST00000376087.5	6775	34	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_31	7.39977415087314	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGACACGATG	-9	True	NA	-80	True	AATATA	-34	NA	27100494	27004115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27005724_27006916_27006963_27012881_27013111_27014493_27014712_27017501_27017793_27022557_27022688_27024446_27024560_27028851_27028946_27029285_27029357_27033224_27033378_27034795_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046524_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_11071.known	chr10	-	3994	20	FSM	ENSG00000136758.20	ENST00000326799.7	3994	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	321.765584568553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCTGTATATGGTCTT	1625	False	NA	NA	False	ATTAAA	-23	NA	27154359	27110453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27147497_27147669_27148905_27149041_27154177
transcript_11075.known	chr10	-	4191	19	FSM	ENSG00000136758.20	ENST00000376016.8	4191	19	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_13	136.403733068643	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAAAGATGTTGTGTG	-6	True	NA	60	True	GATAAA	-17	NA	27154384	27110110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27148905_27149041_27154177
transcript_11079.known	chr10	-	4127	18	FSM	ENSG00000136758.20	ENST00000613434.4	4127	18	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_15	255.267781238464	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGAAAGATGTTGTGT	1564	False	NA	59	True	GATAAA	-16	NA	27154420	27110111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27145427_27145591_27148905_27149041_27154177
transcript_11089.known	chr10	-	3903	13	FSM	ENSG00000107897.20	ENST00000396271.8	3903	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_12	31.281872635051	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	10	True	NA	0	True	AATAAA	-18	NA	27240797	27195213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_1109.known	chr1	-	2428	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	13.9124245031395	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGCCTGTTGCTTTGT	-23	True	NA	-2	True	ATTAAA	-15	NA	20508151	20499447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
transcript_11090.known	chr10	-	3848	13	FSM	ENSG00000107897.20	ENST00000375905.8	3848	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	39.9884531945021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGCTTTTATTACTT	-28	True	NA	-3	True	AATAAA	-15	NA	27242130	27195216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
transcript_11094.known	chr10	-	2758	14	FSM	ENSG00000107897.20	ENST00000676511.1	2758	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	64.1003281661328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGTGAGCCACCACGCCCA	-17	True	NA	NA	False	NA	NA	NA	27240824	27181681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27182716_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240475_27240673
transcript_11095.known	chr10	+	4132	12	FSM	ENSG00000120539.15	ENST00000375940.9	4132	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	51.6179544649001	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTGTCAACATCATT	-4	True	NA	6	True	AATAAA	-18	NA	27155351	27187953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27180952_27181067_27181479_27181582_27186378
transcript_11097.known	chr10	+	3623	12	FSM	ENSG00000120539.15	ENST00000375946.8	3623	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_8	40.0802913171314	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTGTAATTTACTTG	307	False	NA	13	True	AATAAA	-17	NA	27154823	27186919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27180952_27181067_27181479_27181582_27186378
transcript_111.known	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_4	3693.94232068018	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_11100.known	chr10	-	4173	12	FSM	ENSG00000107897.20	ENST00000375897.7	4173	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	19.3206950236876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTTTTATTACTTGT	2	True	NA	-1	True	AATAAA	-17	NA	27240879	27195214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_11103.known	chr10	-	3616	12	FSM	ENSG00000107897.20	ENST00000678392.1	3616	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	54.6281191783012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-9	True	NA	-16	True	AATAAA	-2	NA	27242111	27195229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
transcript_1111.known	chr1	+	809	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.18241233033047	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	7	True	NA	20	True	TATAAA	-20	NA	20589096	20618903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
transcript_11111.known	chr10	+	2968	11	FSM	ENSG00000120539.15	ENST00000342386.10	2968	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	72.0610851986008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAATTTACTTGCATAT	14	True	NA	18	True	AATAAA	-22	NA	27155369	27186924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27181479_27181582_27186378
transcript_11116.known	chr10	-	3698	12	FSM	ENSG00000107897.20	ENST00000677667.1	3698	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	48.5750675767172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-5	True	NA	-16	True	AATAAA	-2	NA	27240812	27195229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_1112.known	chr1	+	762	3	FSM	ENSG00000158825.6	ENST00000461985.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	15.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	-4	True	NA	20	True	TATAAA	-20	NA	20589085	20618903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_20589284_20604927_20605040_20618451
transcript_11125.nic	chr10	+	1358	7	ISM	ENSG00000120539.15	ENST00000342386.10	2968	11	-50	19383	-32	-19177	5prime_fragment	FALSE	canonical	3	224	junction_2	24.4909280256089	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTGGACCTCACTTGT	355	False	NA	13	True	AATAAA	-18	NA	27155319	27167541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101
transcript_11132.known	chr10	-	3474	3	FSM	ENSG00000136758.20	ENST00000477432.1	3474	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	531	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTTGTTCCAATTA	718	False	NA	-6	True	AATAAA	-14	NA	27155266	27145418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27147669_27148905_27149041_27154177
transcript_11135.known	chr10	+	3231	8	FSM	ENSG00000099246.18	ENST00000682181.1	3231	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	341.242447774695	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAGTAATAGTTAA	14	True	NA	-2	True	AATAAA	-10	NA	27504313	27540150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27513965_27514421_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_11137.known	chr10	+	1090	8	FSM	ENSG00000099246.18	ENST00000683538.1	1090	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	378.002969430082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAGCAGTAAATATTTG	44	False	NA	NA	False	NA	NA	NA	27504382	27538163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27514054_27514421_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533999_27537875
transcript_11138.known	chr10	+	2622	8	FSM	ENSG00000099246.18	ENST00000621805.5	2622	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	329.694168735146	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTGTGTAGGAAGTA	NA	False	NA	20	True	AATAAA	-20	NA	27504233	27539829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27531528_27531616_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_1114.known	chr1	-	1941	11	FSM	ENSG00000244038.11	ENST00000602624.7	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	3345	junction_4	199.049767646184	1604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCACCTGGCCCCGGTCCT	7	True	NA	-6	True	AATAAA	-42	NA	20661369	20651776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
transcript_11144.known	chr10	+	4875	7	FSM	ENSG00000099246.18	ENST00000356940.11	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_5	77.9886031559883	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGGATTTTCTTTT	4	True	NA	13	True	AATAAA	-22	NA	27504303	27542239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_11149.known	chr10	+	1800	7	FSM	ENSG00000099246.18	ENST00000683755.1	1800	7	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	292.48285799722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGTAGATTTTTTT	12	True	NA	33	True	AATAAA	-39	NA	27504311	27539185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533940_27533995_27537875
transcript_11150.known	chr10	+	582	7	FSM	ENSG00000099246.18	ENST00000683797.1	582	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	285.311184888049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTTGTTGAAAAGATC	-14	True	NA	NA	False	NA	NA	NA	27504285	27537917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504449_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_11152.known	chr10	+	835	6	FSM	ENSG00000099246.18	ENST00000683042.1	835	6	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_5	56.7612543906493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTTTAACTGCTAT	-14	True	NA	NA	False	NA	NA	NA	27504285	27538107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533995_27537875
transcript_11155.known	chr10	+	4941	6	FSM	ENSG00000099246.18	ENST00000611151.5	4941	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	270.688307837631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGACTTGGATTTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	27504173	27542237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27504438_27509874_27509931_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_11157.known	chr10	+	870	4	FSM	ENSG00000099246.18	ENST00000683924.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	343.074659836926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTGGGATGTTTGA	7	True	NA	19	True	AATAAA	-15	NA	27532536	27538512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_27532580_27533734_27533854_27533927_27533999_27537875
transcript_11158.known	chr10	-	3603	20	FSM	ENSG00000169126.16	ENST00000305242.10	3603	20	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_19	5.96016322816508	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCATAGTTGTT	-19	True	NA	-5	True	AATAAA	-20	NA	27999079	27812167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
transcript_11163.known	chr10	+	5924	14	FSM	ENSG00000095787.24	ENST00000375664.8	5924	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	128.438321255239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCGGTGTGTTTCAATA	NA	False	NA	NA	False	AATACA	-21	NA	28532492	28623112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_11170.known	chr10	+	2176	13	FSM	ENSG00000095787.24	ENST00000375646.5	2176	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	185.213840375569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGGGGGGTTAATTTA	18	True	NA	NA	False	TTTAAA	-14	NA	28532783	28619976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610710_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_11171.known	chr10	+	3513	14	FSM	ENSG00000095787.24	ENST00000628285.3	3513	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	163.567694036886	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAAAATTACCTTGAC	5	True	NA	NA	False	AATAAA	-16	NA	28532770	28620986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583405_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_11172.known	chr10	-	6729	36	FSM	ENSG00000197321.16	ENST00000375400.7	6729	36	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_35	15.2958310980343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCATGTTCCTTTCT	-6	True	NA	-4	True	AATAAA	-42	NA	29735804	29457337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735750
transcript_11174.known	chr10	-	563	6	FSM	ENSG00000197321.16	ENST00000674490.1	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	8.33306666239986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-4	True	NA	NA	False	AAGAAA	-20	NA	29735911	29555051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735754
transcript_11176.nic	chr10	-	2654	9	NIC	ENSG00000107951.15	novel	5560	9	NA	NA	26	184	combination_of_known_junctions	FALSE	canonical	1	7	junction_8	234.018395377372	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATATTCCCAGTATTCC	143	False	NA	NA	False	AATAAA	-20	NA	30349135	30312825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30348856
transcript_11177.known	chr10	-	5560	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_6	56.808752626686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTGCTGTCATTTC	0	True	NA	-15	True	AATAAA	-18	NA	30349278	30309800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
transcript_11181.known	chr10	-	585	2	FSM	ENSG00000237036.6	ENST00000441257.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCAAGAAAGTCGTC	18	True	NA	NA	False	NA	NA	NA	31319027	31318087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31318541_31318895
transcript_11183.known	chr10	-	2503	1	FSM	ENSG00000237036.6	ENST00000607166.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	15	True	NA	1	True	AATAAA	-19	NA	31319030	31316527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31316500_31319000
transcript_11184.known	chr10	-	5060	20	FSM	ENSG00000165322.18	ENST00000344936.7	5060	20	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_16	35.0570567777288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTGCAGATTTAGAAAA	-10	True	NA	30	True	AAAAAG	-1	NA	31928831	31805397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_11185.known	chr10	-	4958	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	33.7889692717082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	NA	False	NA	24	True	NA	NA	NA	31928876	31805403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_11190.known	chr10	-	5084	19	FSM	ENSG00000165322.18	ENST00000396144.8	5084	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	39.8388730070158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	NA	False	NA	24	True	NA	NA	NA	31928876	31805403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_11192.known	chr10	-	3404	15	FSM	ENSG00000120616.16	ENST00000667706.1	3404	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.98510054814692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACATACAGAATTTTAC	22	True	NA	84	True	NA	NA	NA	32347178	32268480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32273921_32274039_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_11193.known	chr10	-	3997	14	FSM	ENSG00000120616.16	ENST00000319778.11	3997	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.3405341475895	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-18	True	NA	-28	True	AATAAA	-29	NA	32347158	32267750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_11194.known	chr10	-	3909	14	FSM	ENSG00000120616.16	ENST00000375110.6	3909	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.51705263908957	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-29	True	NA	-28	True	AATAAA	-29	NA	32378798	32267750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32378490
transcript_11197.nic	chr10	-	1060	5	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-399	10695	0	-10695	5prime_fragment	FALSE	canonical	3	10	junction_4	3	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAAAGTAAAAGA	-18	True	NA	NA	False	GATAAA	-3	NA	32347218	32292553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_11199.nic	chr10	-	845	4	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-399	11253	0	-11253	5prime_fragment	FALSE	canonical	3	10	junction_3	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAAACTGTCGAGGGC	-18	True	NA	NA	False	ATTAAA	-3	NA	32347218	32293111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_32293195_32293591_32293738_32305771_32305932_32346762
transcript_11201.known	chr10	-	907	2	FSM	ENSG00000120616.16	ENST00000480402.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-18	True	NA	-1	True	ATTAAA	-16	NA	32347218	32345111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32345563_32346762
transcript_11202.known	chr10	-	871	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	19	True	NA	-1	True	ATTAAA	-16	NA	32347121	32345111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32345624_32346762
transcript_11206.known	chr10	-	3735	16	FSM	ENSG00000150093.20	ENST00000302278.8	3735	16	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_10	114.443503771754	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	7	True	NA	-2	True	ATTAAA	-18	NA	32958230	32900317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_11207.known	chr10	-	3741	16	FSM	ENSG00000150093.20	ENST00000678479.1	3741	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	416.703518370342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-10	True	NA	-17	True	ATTAAA	-3	NA	32958247	32900332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932510_32932601_32935491_32935559_32958144
transcript_11209.known	chr10	-	2213	12	FSM	ENSG00000099250.18	ENST00000374822.8	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	17.3519713315493	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTACCTCTCTTCTC	1589	False	NA	-4	True	AATAAA	-18	NA	33334642	33197620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_33197710_33202890_33202996_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
transcript_11214.known	chr10	-	4183	21	FSM	ENSG00000108094.17	ENST00000374749.8	4183	21	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_20	65.8019756542309	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-6	True	NA	-14	True	GATAAA	-16	NA	35090341	35008550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090178
transcript_11215.known	chr10	-	4233	21	FSM	ENSG00000108094.17	ENST00000374751.7	4233	21	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_20	55.8344875502588	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	NA	False	NA	-14	True	GATAAA	-16	NA	35090642	35008550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_11216.nic	chr10	-	1075	9	ISM	ENSG00000108094.17	ENST00000691263.1	2717	21	-26	28925	5	-16	5prime_fragment	FALSE	canonical	3	167	junction_8	90.3568446494232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAGAAAAAAAATGGTAA	241	False	NA	NA	False	AATATA	-7	NA	35090370	35038935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090178
transcript_11217.nic	chr10	-	1080	9	ISM	ENSG00000108094.17	ENST00000687524.1	2738	21	-35	28917	-15	-16	5prime_fragment	FALSE	canonical	3	229	junction_8	73.0187261940387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAGAAAAAAAATGGTAA	-15	False	NA	NA	False	AATATA	-7	NA	35090626	35038935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_11226.nic	chr10	+	1512	6	NIC	ENSG00000095794.20	novel	2232	8	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	55.0505222500205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGTGTTGGTTTAAT	30	False	NA	13	True	TATAAA	-14	NA	35127013	35212465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211655
transcript_11231.nic	chr10	+	1127	5	NIC	ENSG00000095794.20	novel	2020	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	53.6720364808342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAAGAATGGTGGCTT	-10	True	NA	2	True	AATATA	-3	NA	35127076	35211865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211253
transcript_11236.known	chr10	+	747	5	FSM	ENSG00000095794.20	ENST00000461968.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	62.5994209238392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAACCTTGAAAGACAT	95	False	NA	NA	False	NA	NA	NA	35126947	35211758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211655
transcript_11237.known	chr10	+	1207	4	FSM	ENSG00000095794.20	ENST00000374726.7	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	48.3206880009887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGGA	70	False	NA	10	True	AATAAA	-19	NA	35126922	35179847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133
transcript_11238.known	chr10	+	415	3	FSM	ENSG00000095794.20	ENST00000482633.5	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	62.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTAGCTTTAAGTCTTC	12	False	NA	NA	False	AATACA	-29	NA	35127047	35179304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35178888_35178987_35179133
transcript_11239.known	chr10	+	1030	3	FSM	ENSG00000095794.20	ENST00000474362.5	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAGGAAAGGATGAT	NA	False	NA	18	True	AATAAA	-21	NA	35126790	35212125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_35127194_35206894_35207052_35211655
transcript_11240.nnic	chr10	-	1542	8	NNC	ENSG00000198105.16	novel	1286	7	NA	NA	0	-204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.9806292407144	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTTCTGTTTGTT	5	True	NA	-6	True	AATAAA	-20	NA	37857610	37828968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_37829549_37831231_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_11241.nnic	chr10	-	1747	8	NNC	ENSG00000198105.16	novel	1286	7	NA	NA	-39	-204	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	42.8933180657999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTTCTGTTTGTT	413	False	NA	-6	True	AATAAA	-20	NA	37857675	37828968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_37829689_37831231_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_11245.known	chr10	-	1286	7	FSM	ENSG00000198105.16	ENST00000374648.7	1286	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	36.6943077632243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCCTAATTATTTTGC	8	True	NA	-9	True	AATAAA	-14	NA	37857558	37830855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_11249.known	chr10	-	4795	6	FSM	ENSG00000198105.16	ENST00000357328.8	4795	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	52.8075752141679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTTGATTAATTCACC	4	True	NA	-12	True	AATAAA	-17	NA	37858084	37828764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37858004
transcript_11250.known	chr10	-	5143	6	FSM	ENSG00000198105.16	ENST00000395867.8	5143	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	34.8654556832404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGATTAATTCACCCT	5	True	NA	-10	True	AATAAA	-19	NA	37857610	37828762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_11255.known	chr10	+	6196	6	FSM	ENSG00000189180.16	ENST00000307441.13	6196	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	97.4363381906361	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGTTTCTGTACTA	-39	True	NA	23	True	AATAAA	-24	NA	38010649	38060063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_38010784_38012297_38012351_38015966_38016046_38016870_38017016_38017290_38017387_38054374
transcript_11257.nnic	chr10	+	2974	6	NNC	ENSG00000189180.16	novel	6196	6	NA	NA	-20	-25	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	103.577217572206	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTTTGATGCCAT	-59	True	NA	5	True	AATAAA	-14	NA	38010629	38056836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38025347_38025412_38054374
transcript_11260.nnic	chr10	+	770	6	NNC	ENSG00000189180.16	novel	6196	6	NA	NA	-20	83	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	99.7208102654606	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGATGAATTTAATGCCT	-59	True	NA	149	True	GATAAA	-16	NA	38010629	38054621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38034325_38034401_38054374
transcript_11262.known	chr10	+	539	5	FSM	ENSG00000189180.16	ENST00000478556.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	91.9140223252143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCAGTGTGATTCATG	10	True	NA	66	True	NA	NA	NA	38010698	38054538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_38010784_38012297_38012351_38016874_38017016_38017290_38017387_38054374
transcript_11267.known	chr10	+	2854	4	FSM	ENSG00000189180.16	ENST00000628825.2	2854	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	104.960309958892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGGGCACCTAACAAT	-34	True	NA	30	True	AATAAA	-39	NA	38010654	38056861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_38010784_38016870_38017016_38017290_38017387_38054377
transcript_11269.nnic	chr10	+	1951	2	ISM	ENSG00000099251.14	ENST00000471365.1	1033	9	-92	17972	-17	-17972	5prime_fragment	FALSE	canonical	3	45	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGGAGATTTTCTA	NA	False	NA	NA	False	AAGAAA	-13	NA	38356362	38360135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_38356490_38358311
transcript_11274.known	chr10	+	8738	7	FSM	ENSG00000075407.19	ENST00000361085.9	8738	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	19.6871362400257	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAATCTCAATGGGTCA	-15	True	NA	NA	False	AATGAA	-20	NA	38094346	38125544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_38094491_38095537_38095634_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38117389
transcript_11276.nnic	chr10	+	1442	9	NNC	ENSG00000099251.14	novel	1401	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	31.1505918884377	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTCCTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	38356355	38378505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_38356490_38358311_38358516_38361279_38361323_38362239_38362339_38363521_38363611_38365433_38365630_38369952_38370010_38371074_38371174_38377984
transcript_11279.known	chr10	+	1401	8	FSM	ENSG00000099251.14	ENST00000494540.5	1401	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	32.891286607457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTCCTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	38356379	38378505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_38356490_38358311_38358516_38362239_38362339_38363495_38363611_38365433_38365630_38369952_38370010_38371074_38371174_38377984
transcript_11290.known	chr10	-	1941	6	FSM	ENSG00000196693.15	ENST00000486187.5	1941	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	34.2368222824491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTCTACATGGTTT	12	True	NA	-6	True	AATACA	-24	NA	42638553	42581593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_42583124_42594594_42594700_42614281_42614359_42631928_42632025_42636919_42636973_42638473
transcript_11293.nic	chr10	-	3050	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	0	-3009	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTGTAATGAGTACAGA	-5	True	NA	NA	False	ATTAAA	-13	NA	42638570	42592117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11294.nic	chr10	-	2930	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	0	-3129	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTTTGATGCCAT	-5	True	NA	-7	True	AATAAA	-14	NA	42638570	42592237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11295.nic	chr10	-	2254	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-20	-3825	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTGTGTGAAGTCAGG	0	True	NA	NA	False	TATAAA	-19	NA	42638590	42592933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11296.nic	chr10	-	1196	6	NIC	ENSG00000196693.15	novel	1941	6	NA	NA	0	-4846	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGGGAAAGCTTTCT	12	True	NA	NA	False	GATAAA	-24	NA	42638553	42593954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_1130.known	chr1	-	3884	13	FSM	ENSG00000127483.19	ENST00000312239.10	3884	13	0	0	0	0	multi-exon	FALSE	canonical	1	42	junction_12	159.730415248805	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	0	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786648
transcript_11300.known	chr10	-	5982	5	FSM	ENSG00000196693.15	ENST00000359467.8	5982	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	31.6267292017369	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGAACATCTTGTTT	-5	True	NA	-11	True	AATAAA	-20	NA	42638570	42589108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_11302.nic	chr10	-	2880	5	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-3	-3129	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	31.2169825575759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTTTGATGCCAT	-8	True	NA	-7	True	AATAAA	-14	NA	42638573	42592237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42638473
transcript_11312.known	chr10	+	7759	23	FSM	ENSG00000165733.8	ENST00000374518.6	7759	23	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	57.6365249495878	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGAGTCAGTGGCATT	3	True	NA	11	True	AATAAA	-22	NA	42782794	42834937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_11314.nic	chr10	+	2198	12	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-23	36453	-23	-36453	5prime_fragment	FALSE	canonical	3	424	junction_1	43.6677917126324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGATGATGATACTCT	-20	True	NA	14	True	AATGAA	-1	NA	42782771	42798484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467
transcript_11317.nic	chr10	+	2181	11	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-23	37414	-23	-37414	5prime_fragment	FALSE	canonical	3	424	junction_1	43.8538481777825	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAATTCTGGTTCAGA	-20	True	NA	NA	False	NA	NA	NA	42782771	42797523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421
transcript_11319.nic	chr10	+	2030	10	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-23	37755	-23	-37755	5prime_fragment	FALSE	canonical	3	424	junction_1	46.219551204877	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	-20	True	NA	23	True	NA	NA	NA	42782771	42797182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_11321.nnic	chr10	+	2169	10	NNC	ENSG00000165733.8	novel	7759	23	NA	NA	6	-37755	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_1	113.87853611482	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	9	True	NA	23	True	NA	NA	NA	42782800	42797182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_42782999_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_11324.nnic	chr10	-	3123	12	NNC	ENSG00000198915.12	novel	3264	13	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	12.1137856037199	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	NA	False	NA	-7	True	AATAAA	-18	NA	43203887	43194534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_11325.nic	chr10	-	1664	12	NIC	ENSG00000198915.12	novel	4104	13	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.1137856037199	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	-36	True	NA	-16	True	NA	NA	NA	43203876	43196092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_11326.nnic	chr10	-	1565	12	NNC	ENSG00000198915.12	novel	4104	13	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	12.1137856037199	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	NA	False	NA	-16	True	NA	NA	NA	43203887	43196092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_11334.known	chr10	-	2617	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	951.691476617641	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	1357	False	NA	-1	True	TATAAA	-19	NA	43407819	43385616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
transcript_11335.known	chr10	-	2670	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	1043.55961337466	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	294	False	NA	-1	True	TATAAA	-19	NA	43408882	43385616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
transcript_11336.known	chr10	-	2186	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	1013.87803342743	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGCACAGATTACTCA	10	True	NA	-44	True	AATAAA	-14	NA	43409166	43386021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
transcript_11337.known	chr10	-	2569	4	FSM	ENSG00000169813.17	ENST00000682386.1	2569	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	712.90158273542	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTCACGCTCCTG	-10	True	NA	-2	True	TATAAA	-18	NA	43409186	43385617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409130
transcript_11346.known	chr10	+	760	2	FSM	ENSG00000230555.2	ENST00000442526.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGGT	118	False	NA	NA	False	NA	NA	NA	43420737	43422100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43421067_43421669
transcript_11347.known	chr10	+	568	4	FSM	ENSG00000243660.12	ENST00000315429.11	568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.0184900284226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTGTAATGTACGTG	NA	False	NA	NA	False	AATAGA	-21	NA	43436840	43481678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43436936_43475720_43475848_43476106_43476203_43481428
transcript_11348.known	chr10	+	2111	4	FSM	ENSG00000243660.12	ENST00000437590.4	2128	4	15	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	5.09901951359278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGTGATATTTCATTGA	11	False	NA	5	True	AATAAA	-19	NA	43437125	43483179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43437263_43475720_43475848_43476106_43476203_43481428
transcript_11350.known	chr10	+	567	3	FSM	ENSG00000243660.12	ENST00000456416.6	567	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCCAGAGGGAAACCT	11	False	NA	NA	False	NA	NA	NA	43437125	43481731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43437263_43475720_43475848_43481428
transcript_11351.known	chr10	+	583	2	FSM	ENSG00000243660.12	ENST00000490208.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGTTGTTGAAAGAATA	33	False	NA	NA	False	NA	NA	NA	43437147	43454532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43437263_43454064
transcript_11354.known	chr10	-	2069	4	FSM	ENSG00000196793.14	ENST00000374446.7	2069	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-22	True	NA	-1	True	NA	NA	NA	43574616	43556343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43558172_43567898_43568022_43573636_43573678_43574539
transcript_11355.known	chr10	-	2027	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTGCCTTGTGTTT	-24	True	NA	-4	True	NA	NA	NA	43574618	43556346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43558172_43567898_43568022_43574539
transcript_11356.known	chr10	-	701	2	FSM	ENSG00000196793.14	ENST00000491188.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAATACTTAACACCA	-3	True	NA	NA	False	NA	NA	NA	43574597	43557528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43558172_43574539
transcript_11359.known	chr10	+	2052	5	FSM	ENSG00000198298.13	ENST00000374435.3	2052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.7238602003246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTATCTCTCTCTCTCTCT	0	True	NA	1	True	AATAAA	-17	NA	43606425	43617903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43606564_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_11361.known	chr10	+	2024	5	FSM	ENSG00000198298.13	ENST00000361807.8	2024	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5724115023974	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	12	True	NA	2	True	AATAAA	-18	NA	43606437	43617904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_43606547_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_11365.known	chr10	-	1201	3	FSM	ENSG00000169740.14	ENST00000395797.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	47.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTTTATAATTTCT	163	False	NA	-4	True	AATAAA	-23	NA	43648704	43643859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43644802_43646063_43646203_43648584
transcript_11366.known	chr10	-	1159	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	35	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	-14	True	NA	-6	True	AATAAA	-21	NA	43648881	43643861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_43644802_43646063_43646203_43648801
transcript_11369.known	chr10	-	1857	3	FSM	ENSG00000107562.17	ENST00000343575.11	1928	3	5	66	0	31	multi-exon	FALSE	canonical	3	142	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTCCTACTGTATGTG	4	True	NA	-70	True	AATAAA	-21	NA	44385092	44377132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_44378724_44380762_44380881_44384944
transcript_1137.known	chr1	-	5067	19	FSM	ENSG00000117298.16	ENST00000374893.11	5067	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_18	31.9405794763331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGTGTCTGGGTGTCT	-24	True	NA	-4	True	AATAAA	-15	NA	21290463	21217249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
transcript_11371.known	chr10	-	1052	4	FSM	ENSG00000107562.17	ENST00000395794.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	62.2253967444162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCAATAAAATGCTAATT	47	False	NA	-101	True	ACTAAA	-28	NA	44385049	44377163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_44377906_44378636_44378724_44380762_44380881_44384944
transcript_11373.known	chr10	+	4350	10	FSM	ENSG00000107551.21	ENST00000489171.5	4350	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	13.9079868696168	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	8910	False	NA	9	True	AATAAA	-15	NA	44959406	44994707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_44959867_44970164_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_11374.known	chr10	-	3078	2	FSM	ENSG00000165511.6	ENST00000625168.1	3078	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTGAACCGCTCTTG	169	False	NA	0	True	AATAAA	-21	NA	45000888	44997697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_45000417_45000529
transcript_11378.known	chr10	+	2103	2	FSM	ENSG00000165512.5	ENST00000298299.4	2103	2	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTCTGTTTATTTTTC	-7	True	NA	20	True	AATAAA	-23	NA	45000922	45005326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_45000979_45003279
transcript_1138.known	chr1	-	5099	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_18	19.9605320446669	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-9	True	NA	-1	True	AATAAA	-18	NA	21345504	21217246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
transcript_11380.known	chr10	+	2390	13	FSM	ENSG00000012779.12	ENST00000542434.5	2390	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	2.89995210688422	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGTTCCATGTGTTAT	-8	True	NA	NA	False	AATAAA	-18	NA	45374175	45446119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_45374430_45382482_45382682_45395854_45395937_45412190_45412314_45424040_45424148_45424959_45425133_45428617_45428765_45440429_45440634_45441343_45441431_45443037_45443217_45443415_45443538_45443727_45443829_45445507
transcript_11393.known	chr10	+	1190	7	FSM	ENSG00000265354.4	ENST00000580018.4	1190	7	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_3	133.529855171876	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGTTGTCTCAATTT	-13	True	NA	50	True	AATAAA	-41	NA	45972488	46003742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_45972731_45975453_45975513_45982522_45982617_45982845_45982931_45985382_45985442_45988736_45988848_46003202
transcript_114.known	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2494	junction_10	2994.81247326106	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_1140.known	chr1	+	2536	12	FSM	ENSG00000162551.14	ENST00000374840.8	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_9	61.941054357155	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGAGTCTTTGTGGT	-2	True	NA	35	True	AATAAA	-23	NA	21509422	21578410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_11400.known	chr10	-	3489	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_9	161.469715847283	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	8	True	NA	-1	True	ATTAAA	-16	NA	46023455	46005087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
transcript_11402.known	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	42.8407905311437	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-14	True	NA	-1	True	ATTAAA	-16	NA	46030623	46005087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_11404.nnic	chr10	-	2470	9	NIC	ENSG00000266412.6	novel	3461	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	210.46080395171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-7	True	NA	-1	True	ATTAAA	-16	NA	46030616	46005087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_46006598_46009410_46009552_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_11406.nic	chr10	-	1414	8	ISM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	5531	0	-4192	5prime_fragment	FALSE	canonical	3	566	junction_7	40.6402836242714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAGGATAAAAATGG	-14	True	NA	NA	False	AAGAAA	-1	NA	46030623	46010618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_11408.nnic	chr10	+	2528	3	NNC	ENSG00000265354.4	novel	1190	7	NA	NA	-6	3059	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	740.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTTCCCTATTTCTCT	NA	False	NA	32	True	AATAAA	-21	NA	45972482	46006801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_45972731_45975453_45975489_46004556
transcript_11410.nic	chr10	-	858	5	NIC	ENSG00000263639.7	novel	920	5	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	2.04633819296811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAATATGTGTGTCCT	NA	False	NA	-6	True	AGTAAA	-17	NA	46048135	46033312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_46033552_46038965_46039072_46039985_46040092_46046234_46046380_46047873
transcript_11411.known	chr10	-	920	5	FSM	ENSG00000263639.7	ENST00000663171.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.34520787991171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAATATGTGTGTCCT	NA	False	NA	-6	True	AGTAAA	-17	NA	46048180	46033312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_46033569_46038965_46039072_46039985_46040092_46046234_46046380_46047873
transcript_11417.nic	chr10	+	1236	4	ISM	ENSG00000204177.11	ENST00000690404.1	2391	6	-3	5733	-3	-5733	5prime_fragment	TRUE	canonical	0	0	junction_1	62.9620697104393	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGCCAGGCACA	83	False	NA	NA	False	NA	NA	NA	46786836	46791739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961
transcript_11418.known	chr10	-	3516	2	FSM	ENSG00000265763.4	ENST00000585316.3	3516	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGAGAAGCTGGG	8	True	NA	-12	True	AATAAA	-15	NA	47384293	47365495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_47368938_47384219
transcript_11422.nic	chr10	-	1536	4	ISM	ENSG00000254929.6	ENST00000431840.2	1241	9	-20	24946	-20	-24946	5prime_fragment	FALSE	canonical	3	92	junction_3	31.0161248385416	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGCAAAAAAATAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	47553534	47548303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553478
transcript_11423.nic	chr10	-	1352	4	ISM	ENSG00000254929.6	ENST00000605970.5	1594	12	-23	30794	8	-25252	5prime_fragment	FALSE	canonical	3	31	junction_3	58.7896438347965	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAGGCCAGACACA	1	True	NA	NA	False	AAAAAG	-7	NA	47553506	47548609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553328
transcript_11424.nic	chr10	-	1334	4	ISM	ENSG00000254929.6	ENST00000431840.2	1241	9	-124	25252	-124	-25252	5prime_fragment	FALSE	canonical	3	92	junction_3	31.0161248385416	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAGGCCAGACACA	NA	False	NA	NA	False	AAAAAG	-7	NA	47553638	47548609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553478
transcript_11427.nnic	chr10	+	2390	9	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5611	782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.2808774513034	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	NA	False	NA	6	True	AATAAA	-17	NA	47695317	47731218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47715650_47715858_47719832_47720062_47726840_47726957_47728774_47728898_47730236
transcript_1143.known	chr1	+	2131	11	FSM	ENSG00000162551.14	ENST00000540617.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	280.595723417161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGTCCCAGGAAGC	3	True	NA	NA	False	NA	NA	NA	21509427	21578175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_11431.nnic	chr10	+	2267	8	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5611	782	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	11.8010722446076	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	NA	False	NA	6	True	AATAAA	-17	NA	47695317	47731218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47715650_47715858_47719832_47720062_47726840_47726957_47730236
transcript_11434.nnic	chr10	+	2060	7	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5611	782	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	16.918103387266	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	NA	False	NA	6	True	AATAAA	-17	NA	47695317	47731218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47719832_47720062_47726840_47726957_47730236
transcript_11441.known	chr10	+	5844	12	FSM	ENSG00000107643.17	ENST00000395611.7	5844	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6749133051267	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	0	True	NA	19	True	AATAAA	-28	NA	48306638	48439357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
transcript_11442.known	chr10	-	1951	2	FSM	ENSG00000128805.15	ENST00000477708.6	1951	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	8322	False	NA	-12	True	ATTAAA	-16	NA	48451627	48446035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_48446620_48450260
transcript_11444.known	chr10	-	3706	23	FSM	ENSG00000197444.10	ENST00000374103.9	3706	23	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_22	7.46354777934364	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTTTTCATTTCATG	-18	True	NA	1	True	AATAAA	-18	NA	49762323	49734640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49756775_49756947_49758388_49758594_49762238
transcript_11446.known	chr10	-	4294	18	FSM	ENSG00000227345.9	ENST00000616448.2	4294	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	96.3255724974164	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	NA	False	NA	-16	True	AATAAA	-21	NA	49942027	49818278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
transcript_11456.known	chr10	+	2623	8	FSM	ENSG00000204152.14	ENST00000478381.5	2623	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	45.6928521181801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	-12	True	NA	NA	False	ATTAAA	-19	NA	49942048	49974850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_49942301_49943234_49943359_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_11458.known	chr10	+	2495	7	FSM	ENSG00000204152.14	ENST00000651259.3	2495	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	12.9925192151313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	-8	True	NA	NA	False	ATTAAA	-19	NA	49942052	49974850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_11463.known	chr10	-	3717	11	FSM	ENSG00000198964.14	ENST00000361781.7	3717	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	11.7341382299681	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTATTTCTACTGTG	-23	True	NA	-13	True	AATAAA	-20	NA	50623956	50305599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_50307322_50307981_50308149_50311261_50311416_50327204_50327323_50343491_50344346_50433475_50433557_50460672_50460815_50466889_50466933_50519830_50519922_50590152_50590248_50623706
transcript_11468.known	chr10	+	5199	7	FSM	ENSG00000204147.11	ENST00000643505.1	5199	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	64.88108781113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATAACCAAAAACTTAC	-9	True	NA	NA	False	AATAAA	-8	NA	50739935	50759240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50739984_50742914_50743011_50743672_50743742_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11473.known	chr10	+	5145	6	FSM	ENSG00000204147.11	ENST00000647317.2	5145	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	42.418863728299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCTCGACTCCCAGTTT	-9	True	NA	NA	False	AATAAA	-23	NA	50739935	50759255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50739984_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11476.known	chr10	+	5005	6	FSM	ENSG00000204147.11	ENST00000643851.1	5005	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	49.6934603343337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAATGTCCTTGAATGTA	-9	True	NA	NA	False	CATAAA	-45	NA	50739935	50759189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50739984_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11478.known	chr10	+	3715	6	FSM	ENSG00000204147.11	ENST00000374007.5	3715	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	48.5040204519172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGTCTAATGAAAGGTA	NA	False	NA	NA	False	AATAAA	-22	NA	50739317	50757188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50740003_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_1148.known	chr1	+	703	5	FSM	ENSG00000162551.14	ENST00000468526.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	395.073648197396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACGTGAGTGCTCGGGGG	418	False	NA	NA	False	NA	NA	NA	21509396	21564211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040
transcript_11480.known	chr10	+	632	6	FSM	ENSG00000204147.11	ENST00000374006.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	54.488163852345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAGTGAACTACCA	3	True	NA	NA	False	AATGAA	-1	NA	50739947	50754809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_50740003_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_11488.nnic	chr10	+	720	3	NNC	ENSG00000185532.20	novel	1549	6	NA	NA	-242163	45178	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	3	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTTTGTGTATATTA	NA	False	NA	NA	False	AATAAA	-22	NA	51804584	51956383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_51804691_51907506_51907571_51955833
transcript_11489.nnic	chr10	+	3289	2	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-12430	-7879	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAAATTAGCTGGGCA	NA	False	NA	NA	False	NA	NA	NA	52034317	52054977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_52037113_52054483
transcript_11490.nnic	chr10	-	984	3	NNC	ENSG00000223502.1	novel	421	2	NA	NA	-6324	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	51074877	51062578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_51062931_51068484_51068553_51074313
transcript_11491.known	chr10	-	4110	1	FSM	ENSG00000177613.9	ENST00000331173.6	4110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTATCTGATATGTTT	-3	True	NA	-4	True	AATAAA	-18	NA	51699595	51695485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_51695500_51699600
transcript_11492.known	chr10	+	1805	4	FSM	ENSG00000107984.10	ENST00000373970.4	1805	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGGTCAATATTTTT	-1	True	NA	NA	False	AATAAA	-14	NA	52314280	52317657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_52314678_52314922_52315086_52316294_52316436_52316553
transcript_11497.known	chr10	-	807	9	FSM	ENSG00000122952.17	ENST00000361148.6	807	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	225.701649030307	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAACTCCTGAGTTCAG	-10	True	NA	-87	True	NA	NA	NA	56361266	56358142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_11499.known	chr10	-	1857	9	FSM	ENSG00000122952.17	ENST00000373944.8	1857	9	0	0	0	0	multi-exon	TRUE	canonical	3	618	junction_3	95.1051227589765	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-3	True	NA	18	True	AATAAA	-42	NA	56361259	56357226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_1150.known	chr1	+	2256	7	FSM	ENSG00000070831.17	ENST00000344548.7	2256	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	252.383086244348	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTGAGGGTTGTTAT	-7	True	NA	16	True	ATTAAA	-21	NA	22052667	22092946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22052743_22074093_22074220_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_11513.nnic	chr10	-	1645	9	NNC	ENSG00000122952.17	novel	1857	9	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	269.697979228618	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTCTTCTGACTTCCT	NA	False	NA	-13	True	AATAAA	-13	NA	56361302	56357444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_56358149_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_11514.known	chr10	-	1621	8	FSM	ENSG00000122952.17	ENST00000489649.6	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	236.638793031377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTTTCTCAAATA	-9	True	NA	-47	True	NA	NA	NA	56361265	56357478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360384_56361195
transcript_11520.known	chr10	-	1851	8	FSM	ENSG00000122952.17	ENST00000395405.5	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	100.82658379614	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-17	True	NA	-6	True	AATAAA	-20	NA	56361273	56357437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_11541.known	chr10	-	1961	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	106.047814163654	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-3	True	NA	-6	True	AATAAA	-20	NA	56361259	56357437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
transcript_1155.known	chr1	+	1435	6	FSM	ENSG00000070831.17	ENST00000315554.13	1435	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	211.187689035133	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATGAAGCTTTATTC	4	True	NA	NA	False	ATTAAA	-23	NA	22052708	22090807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22089942
transcript_11557.known	chr10	+	1068	2	FSM	ENSG00000287016.1	ENST00000655098.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATAGTTTCTCTGAAGT	0	True	NA	2	True	AATAAA	-16	NA	56361478	56364714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_56361857_56364024
transcript_11561.known	chr10	+	2375	3	FSM	ENSG00000122873.12	ENST00000333926.6	2375	3	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	16	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGTTAGGTTAAT	-12	True	NA	NA	False	ATTAAA	-34	NA	58269161	58289586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58269305_58277116_58277323_58287560
transcript_11562.known	chr10	-	1417	1	FSM	ENSG00000261076.1	ENST00000562575.1	1417	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAAACATTTTTTCTT	3490	False	NA	NA	False	AATAAA	-34	NA	58327030	58325613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_58325600_58327000
transcript_11565.known	chr10	+	5025	7	FSM	ENSG00000108064.11	ENST00000487519.6	5025	7	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_4	42.6748039115458	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTATATATTGGTT	-11	True	NA	39	True	AATAAA	-23	NA	58385409	58399220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_11568.known	chr10	+	973	6	FSM	ENSG00000108064.11	ENST00000373895.7	973	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	166.959396261486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGGATCAGAGTAATC	13	True	NA	NA	False	GATAAA	-34	NA	58385433	58395288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58394357_58394415_58394927
transcript_1157.known	chr1	+	10503	6	FSM	ENSG00000070831.17	ENST00000656825.1	10503	6	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	55.1601305292147	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGGTTTGTGTCTTTT	4	True	NA	NA	False	AATAAA	-15	NA	22052708	22101360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_11573.nic	chr10	+	1004	4	ISM	ENSG00000108064.11	ENST00000395377.2	663	6	-619	5720	-360	-5720	5prime_fragment	FALSE	canonical	3	419	junction_2	32.4037034920393	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATCATTGAAATACT	594	False	NA	NA	False	AAAAAG	-23	NA	58384984	58388819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669
transcript_11574.known	chr10	-	3328	14	FSM	ENSG00000148541.13	ENST00000618804.5	3328	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.74131225864699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAACACAG	2	True	NA	-12	True	AATAAA	-17	NA	59362549	59246132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_59247738_59251574_59251677_59252798_59252999_59254347_59254444_59262433_59262646_59264084_59264167_59268552_59268692_59269898_59270110_59283362_59283448_59302800_59302865_59323987_59324107_59352269_59352475_59355886_59355944_59362398
transcript_11577.known	chr10	-	3033	12	FSM	ENSG00000148541.13	ENST00000611933.4	3033	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.13339780720256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATTTTATACAACAA	585	False	59362616	-58	True	ATTAAA	-28	NA	59362594	59246178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_59247738_59251574_59251677_59252798_59252999_59254347_59254444_59268552_59268692_59269898_59270110_59283362_59283448_59302800_59302865_59323987_59324107_59352269_59352475_59355886_59355944_59362398
transcript_11583.known	chr10	-	3811	21	FSM	ENSG00000151150.22	ENST00000355288.6	3811	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_20	19.9889969733351	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCACCCACAT	-4	True	NA	NA	False	AAAAAG	-5	NA	60141016	60029689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
transcript_11596.known	chr10	+	1889	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	483.17778871778	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	-1	True	NA	9	True	ATTAAA	-16	NA	60778477	60794852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
transcript_11603.known	chr10	+	1948	8	FSM	ENSG00000170312.17	ENST00000448257.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	434.511830232785	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTAAACTGTTTAACAA	-4	True	NA	-15	True	AAAAAG	-37	NA	60778492	60794828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791893_60792054_60792147_60792290_60793876
transcript_11607.known	chr10	+	1733	7	FSM	ENSG00000170312.17	ENST00000316629.8	1733	7	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_4	460.558718659557	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	NA	False	NA	0	True	ATTAAA	-7	NA	60778453	60794843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60791889_60792054_60792147_60792290_60793876
transcript_11617.known	chr10	-	5087	6	FSM	ENSG00000196932.12	ENST00000399298.8	5087	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	2.93938769133981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAATGTGGATTTTTGCT	-3	True	NA	-11	True	ATTAAA	-20	NA	61453381	61406641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_61410747_61413458_61413536_61428925_61429147_61431218_61431333_61436169_61436249_61452890
transcript_11618.nic	chr10	-	1155	6	NIC	ENSG00000196932.12	novel	2520	7	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	3.38230690505755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGCAAGAAGTAATCT	NA	False	NA	NA	False	AATAAA	-16	NA	61453448	61412892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_61412999_61413458_61413536_61428925_61429147_61431218_61431333_61436169_61436249_61452890
transcript_11619.known	chr10	-	518	4	FSM	ENSG00000196932.12	ENST00000277749.9	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGCAAGAAGTAATCT	9181	False	NA	NA	False	AATAAA	-16	NA	61431332	61412892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_61412999_61413458_61413536_61428925_61429147_61431218
transcript_11620.known	chr10	+	3141	7	FSM	ENSG00000150347.17	ENST00000309334.5	3141	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.897527467855751	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGAGCTTCACTCCTT	390	False	NA	NA	False	NA	NA	NA	62049210	62093064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_62049484_62050887_62051001_62057116_62057319_62059242_62059296_62069699_62069798_62085701_62085901_62090861
transcript_11624.known	chr10	-	6886	12	FSM	ENSG00000182010.11	ENST00000373789.8	6886	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	70.7159373949953	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTAGCAATTTTATA	0	True	NA	-2	True	AATAAA	-13	NA	62268844	62193085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_11627.known	chr10	-	2076	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	33.4140688932072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTTATTCCTGGGA	21	True	NA	-11	True	AATAAA	-12	NA	62268707	62238156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_1163.known	chr1	+	771	3	FSM	ENSG00000218510.9	ENST00000420503.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGATGCAAGATCCA	6	True	NA	NA	False	NA	NA	NA	22025510	22030800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025640_22027413_22027535_22030279
transcript_11633.nnic	chr10	-	1372	4	NNC	ENSG00000182010.11	novel	6886	12	NA	NA	31	-6481	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	117.519738294845	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATAGATCTTTGAGAT	168	False	NA	NA	False	AATAAA	-16	NA	62268676	62244637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_62245628_62245998_62246058_62262624_62262822_62268550
transcript_11637.known	chr10	-	2979	2	FSM	ENSG00000122877.18	ENST00000242480.4	2979	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTGCAGAAATCATT	-7	True	NA	NA	False	AATAAA	-16	NA	62816366	62811995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_62814469_62815860
transcript_1164.known	chr1	+	338	3	FSM	ENSG00000218510.9	ENST00000642072.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTACCCAATGAAATGAT	17	True	NA	NA	False	AATACA	-25	NA	22025521	22030374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025644_22027413_22027535_22030279
transcript_11640.known	chr10	+	1813	4	FSM	ENSG00000148572.16	ENST00000277746.11	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	18.9267594221045	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	4	True	NA	27	True	AATAAA	-15	NA	63133327	63155024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_63133501_63146208_63146294_63152149_63152191_63153510
transcript_11643.known	chr10	+	1816	3	FSM	ENSG00000148572.16	ENST00000435510.6	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	247	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAACGTGGTTGATAGTT	NA	False	NA	34	True	AATAAA	-22	NA	63133246	63155031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_63133501_63152149_63152191_63153510
transcript_11647.nic	chr10	-	1381	8	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-17	47893	-17	306	5prime_fragment	FALSE	canonical	3	19	junction_7	50.391933270867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAGGAAACCTGAGG	-13	True	NA	NA	False	AAAACA	-14	NA	63465994	63215117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63465494
transcript_11649.nic	chr10	-	1938	7	ISM	ENSG00000171988.20	ENST00000542921.5	8149	25	-190	46900	-3	934	5prime_fragment	FALSE	canonical	3	100	junction_5	22.286019533929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCAGAGCTGGGT	-10	True	NA	NA	False	AAAACA	-41	NA	63269256	63214489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_1165.known	chr1	+	1077	2	FSM	ENSG00000218510.9	ENST00000416769.2	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	6	True	NA	11	True	AATAAA	-1	NA	22025510	22031223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025644_22030279
transcript_11654.nic	chr10	-	1310	7	ISM	ENSG00000171988.20	ENST00000542921.5	8149	25	-190	47528	-3	306	5prime_fragment	FALSE	canonical	3	100	junction_5	22.286019533929	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAGGAAACCTGAGG	-10	True	NA	NA	False	AAAACA	-14	NA	63269256	63215117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_11656.nic	chr10	-	1369	6	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	-3	471	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	41.3114996096729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTCAAAAATAAATGGAG	-10	True	NA	NA	False	AATAAA	-3	NA	63269256	63214952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_11658.known	chr10	-	734	6	FSM	ENSG00000171988.20	ENST00000469152.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	24.0116638323961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGCAATGAACTCCC	-4	True	NA	-127	True	NA	NA	NA	63268875	63215423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_1166.known	chr1	+	1388	2	FSM	ENSG00000218510.9	ENST00000634712.2	1388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGTGCTGTGGTGAT	-7	True	NA	7	True	ATTAAA	-14	NA	22025497	22031219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22025946_22030279
transcript_11660.nic	chr10	-	1040	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-17	212718	-17	-160066	5prime_fragment	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAATGAAAATTTAAGA	-13	True	NA	NA	False	NA	NA	NA	63465994	63379942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_63380483_63465494
transcript_11662.nnic	chr10	-	873	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-15	212883	-15	-160231	5prime_fragment	FALSE	canonical	3	19	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTGGATGTGGTGGCA	-11	True	NA	NA	False	AAAAAG	-35	NA	63465992	63380107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_63380483_63465494
transcript_11664.known	chr10	+	5172	8	FSM	ENSG00000165476.14	ENST00000373758.5	5172	8	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_6	31.3681236874868	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAACGGCATTTTTTT	6	True	NA	NA	False	AATAAA	-18	NA	63521400	63625128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186_63610335_63619654_63619801_63620812
transcript_11668.known	chr10	+	1542	6	FSM	ENSG00000228065.12	ENST00000666706.1	1542	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.6207344378814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAGAAGGAGAGTGAG	-1	True	NA	NA	False	AATAAA	-20	NA	65570556	65698720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65698102
transcript_1167.known	chr1	-	1470	1	FSM	ENSG00000228397.3	ENST00000655655.1	1470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTTTCGGCTTGTGTAA	390	False	NA	NA	False	CATAAA	-16	NA	22025462	22023992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_22024000_22025500
transcript_11670.known	chr10	+	1319	4	FSM	ENSG00000228065.12	ENST00000657227.2	1320	4	1	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	8.2192186706253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATCCAAGTGGTGAAATC	-13	True	NA	NA	False	AATAAA	-26	NA	65570512	65586279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484
transcript_11673.known	chr10	-	1221	5	FSM	ENSG00000108176.15	ENST00000225171.7	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1.11803398874989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAATTTATAATTCAA	-4	True	NA	NA	False	AATAAA	-19	NA	67838188	67796668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67797211_67805582_67805788_67811523_67811664_67823313_67823393_67837933
transcript_11674.known	chr10	-	1064	3	FSM	ENSG00000108176.15	ENST00000339758.7	1064	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAGAAATTACCTCATA	8	True	NA	NA	False	NA	NA	NA	67838096	67810841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67811664_67823313_67823393_67837933
transcript_11676.known	chr10	+	1222	1	FSM	ENSG00000272892.1	ENST00000610279.1	1222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	4	True	ACTAAA	-15	NA	67849524	67850746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_67849500_67850700
transcript_11678.known	chr10	+	4107	9	FSM	ENSG00000096717.12	ENST00000212015.11	4107	9	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_4	37.7491721763537	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTTAAGGTATATAAT	-1	True	NA	44	True	ATTAAA	-31	NA	67884655	67918390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_67885152_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
transcript_1168.known	chr1	+	8701	18	FSM	ENSG00000184677.18	ENST00000375647.5	8701	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	6.91870740172806	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACTATTCCCTGCATTC	-3	True	NA	10	True	AATAAA	-17	NA	22451850	22531154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22452005_22489879_22490646_22491399_22491534_22501491_22501685_22502298_22502442_22506048_22506242_22508000_22508138_22508529_22508732_22509099_22509234_22511178_22511348_22511675_22512135_22512923_22513131_22517299_22517465_22520060_22520276_22521495_22521659_22522376_22522464_22524217_22524445_22526201
transcript_11683.known	chr10	+	673	4	FSM	ENSG00000096717.12	ENST00000497639.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	195.6635434163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGATATTGAATATT	474	False	NA	NA	False	NA	NA	NA	67885180	67891496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_67885400_67887416_67887534_67888881_67889124_67891401
transcript_11684.known	chr10	-	4445	26	FSM	ENSG00000148634.16	ENST00000395198.7	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	31.7042836222489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCAGTGGTTCTCAT	3	True	NA	-9	True	AATAAA	-21	NA	68075283	67921907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67959112_67959137_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_11686.known	chr10	-	4424	25	FSM	ENSG00000148634.16	ENST00000373700.9	4424	25	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_11	16.6724989795238	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGTGGTTCTCATATA	3	True	NA	-6	True	AATAAA	-24	NA	68075283	67921904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_11691.nic	chr10	-	2313	16	ISM	ENSG00000148634.16	ENST00000412272.6	4211	24	-72	44708	-54	-1824	5prime_fragment	FALSE	canonical	3	84	junction_2	17.2991971554238	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGTTTTGAAATGAGAA	NA	False	NA	-19	True	AATAAA	-14	NA	68075355	67966615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_11694.known	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	59.3520569708133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	3	True	NA	-2	True	AATAAA	-18	NA	68075283	68067688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
transcript_11698.known	chr10	-	4269	18	FSM	ENSG00000204130.14	ENST00000602465.6	4269	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.86054782091621	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTGGTGTATGCCCTA	-4	True	NA	93	True	AATAAA	-22	NA	68407277	68343407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68407185
transcript_117.known	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_14	3299.83510418987	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_1170.known	chr1	+	5019	17	FSM	ENSG00000070886.12	ENST00000166244.8	5019	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	20.7483997876945	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTCCCCCATTTTTTC	2	True	NA	8	True	AATAAA	-17	NA	22563488	22603595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_22563730_22569288_22569354_22576216_22576881_22586479_22586636_22588870_22589207_22593325_22593451_22593523_22593687_22595229_22595324_22596105_22596174_22597311_22597477_22597675_22597862_22598150_22598213_22598837_22599048_22600660_22600811_22600897_22601089_22601299_22601474_22601626
transcript_11714.nic	chr10	+	1782	10	NIC	ENSG00000096746.18	novel	1332	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	394.320543920837	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	376	False	NA	19	True	AATAAA	-15	NA	68331689	68342271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11715.nic	chr10	+	2423	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	394.320543920837	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	657	False	NA	21	True	AATAAA	-21	NA	68331970	68343193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11720.nic	chr10	+	1827	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	405.801264988993	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	376	False	NA	19	True	AATAAA	-15	NA	68331689	68342271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11721.nic	chr10	+	2409	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	405.801264988993	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	716	False	NA	21	True	AATAAA	-21	NA	68332029	68343193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_11725.known	chr10	+	1332	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_4	343.12305678687	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	26	False	NA	20	True	AATAAA	-16	NA	68332121	68342272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_1173.known	chr1	+	3085	21	FSM	ENSG00000004487.18	ENST00000400181.9	3085	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1121.75106307059	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	-37	True	NA	16	True	AATAAA	-17	NA	23019467	23083689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23019948_23030468_23030635_23044426_23044487_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23066059_23066072_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_11731.known	chr10	+	2356	10	FSM	ENSG00000096746.18	ENST00000265866.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	356.824817827017	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	-1	True	NA	21	True	AATAAA	-21	NA	68332063	68343193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_1174.known	chr1	-	1190	4	FSM	ENSG00000169641.14	ENST00000471849.5	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	41.3628926562068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	9271	False	NA	NA	False	AAGAAA	-2	NA	23168845	23093442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23094381_23109021_23109128_23109584_23109651_23168765
transcript_11744.known	chr10	-	2165	10	FSM	ENSG00000108187.16	ENST00000309049.8	2165	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	4.26296135405575	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAATGT	-13	True	NA	NA	False	NA	NA	NA	68332906	68283063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306907_68332783
transcript_1178.nic	chr1	-	1317	3	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8949	9234	-14	179	internal_fragment	FALSE	canonical	3	84	junction_2	17.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTATTAGCCAGCCAAC	-4	True	NA	-62	True	AATAAA	-3	NA	23168859	23093263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_23094381_23109021_23109128_23168765
transcript_1179.nic	chr1	-	1138	3	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8949	9413	-14	0	internal_fragment	FALSE	canonical	3	84	junction_2	17.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	-4	True	NA	NA	False	AAGAAA	-2	NA	23168859	23093442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_23094381_23109021_23109128_23168765
transcript_118.known	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	6178	junction_10	2111.7668010986	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_1180.nic	chr1	-	989	3	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8949	9562	-14	-149	internal_fragment	FALSE	canonical	3	84	junction_2	17.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCGAGATTATACAAGG	-4	True	NA	80	True	GATAAA	-36	NA	23168859	23093591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_23094381_23109021_23109128_23168765
transcript_11801.known	chr10	+	3356	8	FSM	ENSG00000096746.18	ENST00000469172.5	3356	8	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_2	390.329687964063	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTTGATACTTTTTA	2638	False	NA	21	True	AATAAA	-17	NA	68331173	68342273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68332217_68337198_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_1181.nic	chr1	-	927	3	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8949	9624	-14	-211	internal_fragment	FALSE	canonical	3	84	junction_2	17.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAAAATGAGAAAT	-4	True	NA	18	True	AATGAA	-3	NA	23168859	23093653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_23094381_23109021_23109128_23168765
transcript_11812.known	chr10	+	635	5	FSM	ENSG00000096746.18	ENST00000486854.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	386.1537906068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAATGAGAGATGG	7	False	NA	13	True	NA	NA	NA	68332102	68339201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139
transcript_11815.nic	chr10	-	4277	21	NIC	ENSG00000138346.15	novel	4267	21	NA	NA	-10	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	54.9076497402684	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	NA	False	NA	-4	True	AATAAA	-18	NA	68471983	68414063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_68415106_68416706_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_1182.known	chr1	-	3715	3	FSM	ENSG00000169641.14	ENST00000314174.5	3715	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGCTCCCTTCTTTAA	10	True	NA	NA	False	NA	NA	NA	23168817	23090426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23090899_23091189_23094381_23168765
transcript_11822.known	chr10	-	4267	21	FSM	ENSG00000138346.15	ENST00000358410.8	4267	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.3201908183323	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-43	True	NA	-4	True	AATAAA	-18	NA	68471973	68414063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_68415108_68416708_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_11828.nic	chr10	+	640	2	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	-41	122078	-41	-122078	5prime_fragment	FALSE	canonical	3	62	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCCAACTACGAAAGACAA	-1	True	NA	NA	False	AAAAAG	-6	NA	68560295	68572409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68560743_68572216
transcript_11829.known	chr10	+	9612	12	FSM	ENSG00000138336.9	ENST00000373644.5	9612	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	38.6298390212788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCATCTAACATTATTT	3	True	NA	12	True	AATAAA	-32	NA	68560336	68694487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68681398_68681489_68682835_68682974_68686355_68686708_68690807
transcript_11830.known	chr10	+	4658	25	FSM	ENSG00000060339.14	ENST00000265872.11	4658	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	129.516347906355	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	9	True	NA	9	True	ATTAAA	-19	NA	68721238	68792377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_11835.nic	chr10	+	2601	18	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-83	21046	12	0	5prime_fragment	FALSE	canonical	0	0	junction_14	122.623795226332	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	72	False	NA	51	True	GATAAA	-13	NA	68721155	68771331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_11838.nic	chr10	+	2670	18	NIC	ENSG00000060339.14	novel	4658	25	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	146.130671011874	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	-19	True	NA	51	True	GATAAA	-13	NA	68721210	68771331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68721407_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_11840.nnic	chr10	+	2643	18	NNC	ENSG00000060339.14	novel	478	5	NA	NA	247	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	146.555562405431	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	272	False	NA	51	True	GATAAA	-13	NA	68721501	68771331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_68721671_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_11845.known	chr10	+	2432	17	FSM	ENSG00000060339.14	ENST00000541012.5	2432	17	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	110.828820005222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATAACAACCTGC	-3	True	NA	15	True	GATAAA	-30	NA	68721226	68771444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_11848.nic	chr10	+	2556	17	ISM	ENSG00000060339.14	ENST00000539539.5	3224	22	-83	16985	12	0	5prime_fragment	FALSE	canonical	0	0	junction_13	151.435204274799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	72	False	NA	51	True	GATAAA	-13	NA	68721155	68771331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_11852.nic	chr10	+	2625	17	NIC	ENSG00000060339.14	novel	3224	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	170.102864099932	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	-19	True	NA	51	True	GATAAA	-13	NA	68721210	68771331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68721407_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_11854.nic	chr10	+	2280	16	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-83	31188	12	3891	5prime_fragment	FALSE	canonical	0	0	junction_14	126.398030926998	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTATGTACTCAATCTAT	72	False	NA	22	True	GATAAA	-1	NA	68721155	68761189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006
transcript_11856.known	chr10	+	2407	16	FSM	ENSG00000060339.14	ENST00000543225.5	2407	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	163.170531108476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGGATAAAAA	12	True	NA	21	True	NA	NA	NA	68721241	68771301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_11858.known	chr10	+	4540	24	FSM	ENSG00000060339.14	ENST00000630771.2	4540	24	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	121.755946043614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTACTTCCTTCAG	60	False	NA	7	True	ATTAAA	-17	NA	68721143	68792375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_1186.known	chr1	-	2691	11	FSM	ENSG00000125944.21	ENST00000374616.7	2691	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	644.336255382234	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	340	False	NA	-16	True	AATAAA	-26	NA	23344310	23309782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_11866.nic	chr10	+	2675	16	NIC	ENSG00000107625.14	novel	2501	15	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	78.3361985291602	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	NA	False	NA	25	True	AATAAA	-28	NA	68901252	68946847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68901472_68906225_68906338_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_11869.known	chr10	+	2501	15	FSM	ENSG00000107625.14	ENST00000373585.8	2501	15	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	21.3394575605752	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	18	True	NA	25	True	AATAAA	-28	NA	68901314	68946847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_1187.known	chr1	-	2694	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	460.752688543431	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-1	True	NA	-19	True	AATAAA	-23	NA	23344322	23309785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
transcript_11872.nnic	chr10	+	2291	13	NIC	ENSG00000107625.14	novel	2501	15	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_11	66.7209674690048	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	NA	False	NA	25	True	AATAAA	-28	NA	68901229	68946847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68943212_68943258_68946351
transcript_11875.known	chr10	+	4664	15	FSM	ENSG00000165732.14	ENST00000354185.9	4664	15	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_10	60.1601603884097	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGGCTTTTGTTTTC	-3	True	NA	13	True	AATAAA	-16	NA	68956169	68985068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68956313_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_11878.known	chr10	+	4829	15	FSM	ENSG00000165732.14	ENST00000620315.2	4776	15	29	-82	29	-1	multi-exon	FALSE	canonical	3	32	junction_1	182.665524600432	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	-1	True	NA	12	True	AATAAA	-15	NA	68956439	68985067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68956749_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_11888.nic	chr10	+	332	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-8	19336	-5	-19336	5prime_fragment	FALSE	canonical	3	722	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGGAGCCATCTCAAA	NA	False	NA	-16	True	AAAAAG	-9	NA	68956129	68959954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68956313_68959805
transcript_11889.nic	chr10	+	427	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	0	19233	0	-19233	5prime_fragment	FALSE	canonical	3	722	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGACAAAAAATGAGGAGCC	NA	False	NA	22	True	AAAAAG	-43	NA	68956137	68960057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68956313_68959805
transcript_11890.nic	chr10	+	474	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	6	19180	6	-19180	5prime_fragment	FALSE	canonical	3	722	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGATGAAGAAAGAAAAGG	NA	False	NA	75	True	AATAGA	-16	NA	68956143	68960110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_68956313_68959805
transcript_11894.known	chr10	+	2462	7	FSM	ENSG00000198954.9	ENST00000361983.7	2462	7	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_6	38.2041300850517	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTCCTTTTTGTTT	6	True	NA	NA	False	AATAAA	-29	NA	68988802	69016982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_11895.known	chr10	+	2359	6	FSM	ENSG00000198954.9	ENST00000675576.1	2359	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	138.470791143837	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	6	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_68989259_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_11898.known	chr10	+	4227	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_8	70.4765031765907	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTCATTGTT	-27	True	NA	NA	False	ATTAAA	-21	NA	69124177	69174412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_11903.known	chr10	+	2554	8	FSM	ENSG00000122958.15	ENST00000395098.5	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	261.742746425039	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGAGCTTGCTGTTT	84	False	NA	16	True	AATAAA	-12	NA	69124151	69172856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69171155
transcript_11908.nic	chr10	+	2590	8	NIC	ENSG00000122958.15	novel	3229	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	268.512227517725	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTTGCTGTTTGCATG	-17	True	NA	21	True	AATAAA	-17	NA	69124187	69172861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_69124281_69132897_69133048_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_11914.nic	chr10	+	2609	16	NIC	ENSG00000156502.14	novel	2477	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	84.6329066550883	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	-19	True	NA	64	True	AATAAA	-14	NA	69180236	69209093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_69180563_69182519_69182655_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_11916.known	chr10	+	2477	15	FSM	ENSG00000156502.14	ENST00000359655.9	2477	15	0	0	0	0	multi-exon	TRUE	canonical	3	213	junction_9	26.9057311245567	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	-22	True	NA	64	True	AATAAA	-14	NA	69180233	69209093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_1192.known	chr1	-	7646	10	FSM	ENSG00000125944.21	ENST00000478691.5	7646	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	587.12011095802	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTGGTGATTTTGG	314	False	NA	0	True	AATAAA	-18	NA	23344336	23304687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
transcript_11929.known	chr10	+	3602	18	FSM	ENSG00000156515.24	ENST00000359426.7	3602	18	0	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_7	113.430465873306	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGAGTGATGCTTAATG	-34	True	NA	29	True	AGTAAA	-18	NA	69318846	69401882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69319011_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_11934.known	chr10	+	1703	8	FSM	ENSG00000099282.10	ENST00000373290.7	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.2120377146637	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	-30	True	NA	20	True	AATAAA	-22	NA	69451464	69507666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69451691_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_11936.nnic	chr10	+	1409	6	NIC	ENSG00000099282.10	novel	1703	8	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	36.124230095602	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	3	True	NA	20	True	AATAAA	-22	NA	69451497	69507666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_69451691_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_11937.nnic	chr10	+	522	3	FSM	ENSG00000236154.2	ENST00000685746.1	533	3	0	11	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGTAAAGTGGAGTGC	1958	False	NA	14	True	AATAAA	-28	NA	69574917	69577154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69575149_69576018_69576138_69576982
transcript_11940.known	chr10	+	1073	4	FSM	ENSG00000171224.9	ENST00000373279.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	27.471197037382	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	-9	True	NA	114	True	AATAAA	-17	NA	69630246	69633596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69630314_69631479_69631548_69631708_69631840_69632789
transcript_11943.known	chr10	+	746	3	FSM	ENSG00000171224.9	ENST00000491890.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	32	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGCAGGCATATTTG	-5	True	NA	NA	False	NA	NA	NA	69630250	69633112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_69630314_69631479_69631840_69632789
transcript_11945.nnic	chr10	+	1005	3	NIC	ENSG00000171224.9	novel	1073	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	79	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	-9	True	NA	114	True	AATAAA	-17	NA	69630246	69633596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_69630314_69631708_69631840_69632789
transcript_11953.known	chr10	+	1932	9	FSM	ENSG00000099284.15	ENST00000373255.9	1932	9	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_2	46.6380678737874	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTATTGCAACATT	-9	True	NA	30	True	AATAAA	-25	NA	70052845	70112282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_11954.known	chr10	-	3134	9	FSM	ENSG00000042286.15	ENST00000307864.3	3134	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	9.3799986673773	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGGATCTTTTATTTT	4	True	NA	NA	False	AATAAA	-19	NA	70132825	70112270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70132733
transcript_11957.nnic	chr10	-	1478	9	Fusion	ENSG00000156521.14_ENSG00000042286.15	novel	3134	9	NA	NA	0	796	multi-exon	FALSE	canonical	2	7	junction_8	19.3063299205209	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGGTTTGGAAGGTG	-11	True	NA	-5	True	ATTAAA	-23	NA	70146676	70113978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70146532
transcript_11962.known	chr10	-	2620	4	FSM	ENSG00000156521.14	ENST00000479086.1	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	53.2228021309163	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTGTGTCTCTGAGC	-11	True	NA	-4	True	AATAAA	-12	NA	70146676	70137982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70146532
transcript_11964.known	chr10	-	3341	3	FSM	ENSG00000156521.14	ENST00000494143.5	3341	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTCTCTGAGCTC	6922	False	NA	-2	True	AATAAA	-14	NA	70144835	70137980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70140142_70142667_70142854_70143841
transcript_11966.known	chr10	-	5981	8	FSM	ENSG00000079332.15	ENST00000373242.6	5981	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	428.151174903712	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-28	True	NA	-16	True	ATTAAA	-14	NA	70170523	70147288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689_70162760_70170412
transcript_11971.known	chr10	-	5902	7	FSM	ENSG00000079332.15	ENST00000373241.9	5902	7	0	0	0	0	multi-exon	FALSE	canonical	3	818	junction_4	122.315734428931	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-19	True	NA	-16	True	ATTAAA	-14	NA	70170514	70147288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70170412
transcript_1198.nic	chr1	-	1403	10	ISM	ENSG00000125944.21	ENST00000302271.11	7751	11	-79	6561	-27	-795	5prime_fragment	FALSE	canonical	3	532	junction_9	443.261341968765	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGAGCGCCAAG	287	False	NA	28	True	AATAGA	-43	NA	23344363	23311248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_11986.known	chr10	-	1292	11	FSM	ENSG00000180817.12	ENST00000373232.8	1292	11	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_8	99.9847988446244	1271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTAGGATATTTTTA	-1	True	NA	-5	True	AATAAA	-16	NA	70233429	70202834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
transcript_1199.nic	chr1	-	1404	10	ISM	ENSG00000125944.21	ENST00000374612.5	2694	11	-39	1463	-25	-795	5prime_fragment	FALSE	canonical	3	406	junction_9	476.556811998033	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGAGCGCCAAG	289	False	NA	28	True	AATAGA	-43	NA	23344361	23311248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
transcript_11995.known	chr10	-	3074	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	10.0249688278817	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-2	True	NA	-6	True	AATAAA	-17	NA	70382625	70298974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
transcript_11996.known	chr10	-	2959	4	FSM	ENSG00000172731.15	ENST00000395010.5	2959	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	24.9131825880731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	NA	False	NA	-1	True	AATAAA	-22	NA	70382650	70298969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70382548
transcript_11997.known	chr10	-	2924	4	FSM	ENSG00000172731.15	ENST00000358141.6	2924	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	34.1207007873845	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-3	True	NA	-7	True	AATAAA	-16	NA	70382626	70298975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70301509_70323862_70324031_70376451_70376597_70382548
transcript_11998.known	chr10	-	2906	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	31.2089730686545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-3	True	NA	-7	True	AATAAA	-16	NA	70382626	70298975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
transcript_12.known	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00035_+_0_1100
transcript_1200.known	chr1	-	1837	9	FSM	ENSG00000125944.21	ENST00000606561.5	1837	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	533.549420742821	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGAAGAAATCACTATT	-13	True	NA	NA	False	NA	NA	NA	23344295	23310332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23337753_23337862_23338489_23338609_23344210
transcript_12000.known	chr10	+	7491	3	FSM	ENSG00000148730.7	ENST00000373218.5	7491	3	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_1	14	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTTTTAATTTTTTA	-2	True	NA	22	True	AGTAAA	-16	NA	70404144	70428618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_70404547_70419913_70420100_70421715
transcript_12005.nnic	chr10	-	1791	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-805	297	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	76.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGCCTCAGGCTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	70442486	70432451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_12006.known	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-1	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70433089_70435285_70435984_70441474
transcript_12008.known	chr10	+	5778	15	FSM	ENSG00000166224.17	ENST00000373202.8	5778	15	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	15.7201287838106	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTTACCTGT	5	True	NA	NA	False	AATAAA	-25	NA	70815947	70881184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_70816127_70816810_70816881_70844472_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
transcript_12009.nic	chr10	-	488	4	NIC	ENSG00000166228.9	novel	389	3	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	227.503846121335	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGGTCTCTTCAGTT	-18	True	NA	0	True	AATACA	-35	NA	70888599	70882279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_70882486_70885151_70885233_70885797_70885930_70888530
transcript_12010.known	chr10	-	732	4	FSM	ENSG00000166228.9	ENST00000493228.1	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	268.130565210309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTCCGGGGGAAGGG	3315	False	NA	NA	False	NA	NA	NA	70888254	70883931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70887852
transcript_12012.known	chr10	-	787	4	FSM	ENSG00000166228.9	ENST00000299299.4	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	105.707142615814	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	16	True	NA	-7	True	AATAAA	-18	NA	70888565	70883509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70888530
transcript_12013.known	chr10	+	2256	6	FSM	ENSG00000198246.9	ENST00000373189.6	2256	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	17.8370401132026	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTCATTGATGTCT	3	True	NA	16	True	AATAAA	-16	NA	71319258	71363385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_12015.known	chr10	+	2136	5	FSM	ENSG00000198246.9	ENST00000644591.1	2136	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	42.9243520626695	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	6	True	NA	-18	True	NA	NA	NA	71319261	71363351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_71319311_71322755_71323055_71351561_71351789_71356080_71356244_71361953
transcript_12016.known	chr10	+	1927	4	FSM	ENSG00000198246.9	ENST00000644088.1	1927	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54.7133946630581	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATTGATGTCTCTGTT	-3	True	NA	21	True	AATAAA	-21	NA	71319282	71363390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_71319311_71322755_71323055_71356080_71356244_71361953
transcript_12019.known	chr10	-	2748	14	FSM	ENSG00000197746.15	ENST00000394936.8	2748	14	0	0	0	0	multi-exon	FALSE	canonical	3	4305	junction_5	516.772013183248	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTAATGTTTCTGT	-3	True	NA	-28	True	AATAAA	-16	NA	71851251	71816297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822008_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_12024.known	chr10	-	2830	14	NNC	ENSG00000197746.15	novel	2748	14	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1487.63537795774	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCTAATGTTTCTG	9125	False	NA	28	True	AATAAA	-15	NA	71851325	71816298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822017_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_12025.nic	chr10	-	1282	7	ISM	ENSG00000107742.14	ENST00000373109.7	5224	11	18113	3372	-287	399	3prime_fragment	FALSE	canonical	3	10	junction_3	2.40947204913349	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTGACAGGTCAAAAT	-5	True	NA	-25	True	AATACA	-14	NA	72070438	72062405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311
transcript_12028.nic	chr10	-	2160	11	NIC	ENSG00000138303.18	novel	2270	13	NA	NA	69	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	55.9878558260629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	36	True	NA	-13	True	ATTAAA	-15	NA	72215904	72096521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72102849_72102968_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_12029.nic	chr10	-	2142	11	NIC	ENSG00000138303.18	novel	2270	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	52.2858489459624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	-20	True	NA	-13	True	ATTAAA	-15	NA	72216311	72096521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72102849_72102968_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_1203.nic	chr1	-	1261	9	NIC	ENSG00000125944.21	novel	2694	11	NA	NA	-51	-795	combination_of_known_junctions	FALSE	canonical	3	1293	junction_8	216.197247901078	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGAGCGCCAAG	263	False	NA	28	True	AATAGA	-43	NA	23344387	23311248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
transcript_12033.nic	chr10	-	2134	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	32.9211553432713	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	1135	False	NA	-13	True	ATTAAA	-15	NA	72215996	72096521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_12034.known	chr10	-	2479	10	FSM	ENSG00000138303.18	ENST00000672957.1	2479	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	10.3863633293794	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTATGATCACA	15	True	NA	-26	True	AATAAA	-14	NA	72216276	72096031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_12035.nic	chr10	-	1613	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	32.9211553432713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	1135	False	NA	-10	True	CATAAA	-19	NA	72215996	72097042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_12040.known	chr10	-	1349	9	FSM	ENSG00000138303.18	ENST00000672940.1	1349	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	42.0029760850347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	14	True	NA	-10	True	CATAAA	-19	NA	72216277	72097042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_12045.known	chr10	+	3567	5	FSM	ENSG00000166295.9	ENST00000621663.4	3567	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	338.064342988136	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	-29	True	NA	10	True	ATTAAA	-16	NA	72215999	72235858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72216139_72220053_72220380_72223887_72224057_72230365_72230441_72233000
transcript_12048.nic	chr10	+	626	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	-320	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	-43	True	NA	28	True	NA	NA	NA	72215985	72233295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_12049.nic	chr10	+	1087	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	-73	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCTGAGTTCTTCTCA	-43	True	NA	19	True	AATAAA	-28	NA	72215985	72233756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_12050.nic	chr10	+	1160	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	-43	True	NA	21	True	AATAAA	-21	NA	72215985	72233829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_12054.known	chr10	+	3231	4	FSM	ENSG00000166295.9	ENST00000299381.5	3231	4	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	218.474000487218	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTCTCATTGATCAC	-17	True	NA	12	True	ATTAAA	-18	NA	72216011	72235860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72216139_72223887_72224057_72230365_72230441_72233000
transcript_12061.known	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	460.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	0	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72216073_72230365_72230441_72233000
transcript_12064.nic	chr10	+	720	3	ISM	ENSG00000166295.9	ENST00000621663.4	3567	5	12	11704	0	-9461	5prime_fragment	FALSE	canonical	3	198	junction_2	37.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTCCACATTTCATT	-17	True	NA	20	True	ATTAAA	-17	NA	72216011	72224154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_72216139_72220053_72220380_72223887
transcript_12065.nnic	chr10	+	489	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	8	-320	combination_of_known_splicesites	FALSE	canonical	3	191	junction_1	406	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	-9	True	NA	28	True	NA	NA	NA	72216019	72233295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_12066.nnic	chr10	+	950	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	8	-73	combination_of_known_splicesites	FALSE	canonical	3	191	junction_1	406	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCTGAGTTCTTCTCA	-9	True	NA	19	True	AATAAA	-28	NA	72216019	72233756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_12067.nnic	chr10	+	1023	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	191	junction_1	406	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	-9	True	NA	21	True	AATAAA	-21	NA	72216019	72233829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_12069.nnic	chr10	+	367	2	NIC	ENSG00000166295.9	novel	734	3	NA	NA	-5	-13273	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAGAAAAGAAAACATA	-34	True	NA	NA	False	NA	NA	NA	72215994	72220342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_72216073_72220053
transcript_12070.nic	chr10	+	407	2	ISM	ENSG00000166295.9	ENST00000299381.5	3231	4	-15	11708	-3	-9463	5prime_fragment	FALSE	canonical	3	470	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCAGCTCCACATTTCA	-32	True	NA	18	True	ATTAAA	-15	NA	72215996	72224152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_72216139_72223887
transcript_12072.known	chr10	+	1744	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	4.5	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	1	True	NA	16	True	AATAAA	-17	NA	72273923	72276036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72274061_72274156_72274422_72274694
transcript_12073.known	chr10	+	1830	2	FSM	ENSG00000168209.6	ENST00000473155.2	1830	2	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAACAGTTGGTTGAG	1	True	NA	6	True	AATAAA	-7	NA	72273923	72276026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_72274422_72274694
transcript_12074.known	chr10	-	2935	9	FSM	ENSG00000148719.16	ENST00000444643.8	2935	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	34.9919633630352	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAATATATGTTTA	-3	True	NA	-33	True	NA	NA	NA	72354919	72332862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72334618_72335779_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_12076.nic	chr10	-	1292	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	-53	18	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	40.167617554443	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCACAGCTGCCCTCTC	5	True	NA	-6	True	ATTAAA	-19	NA	72354972	72334504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_12077.known	chr10	-	4360	8	FSM	ENSG00000148719.16	ENST00000338820.7	4360	8	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	8.3397254396151	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGGTCTGCATTGAG	NA	False	NA	0	True	AATATA	-20	NA	72355149	72332829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_12082.known	chr10	-	2357	12	FSM	ENSG00000107745.20	ENST00000361114.10	2357	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	22.4370561260453	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTCCTTTATTTTAG	-2	True	NA	-13	True	AATAAA	-14	NA	72626079	72367339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_12088.known	chr10	-	580	3	FSM	ENSG00000107745.20	ENST00000604025.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCTAGGACCAATAA	3	True	NA	NA	False	NA	NA	NA	72626074	72562710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_72563064_72566632_72566795_72626009
transcript_12089.known	chr10	-	2488	12	NNC	ENSG00000107745.20	novel	2357	12	NA	NA	-60	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	85.9622250307157	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGGTCCTCTAGGCC	NA	False	NA	0	True	AATAAA	-27	NA	72626191	72367326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508272_72533741_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_12094.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000373008.6	2727	15	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_7	27.4408454680245	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	488	False	NA	-15	True	TTTAAA	-5	NA	73096850	73007216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12095.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000307116.6	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	58.8883412459026	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	488	False	NA	-15	True	TTTAAA	-5	NA	73096850	73007216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12100.nic	chr10	-	1201	7	ISM	ENSG00000122884.13	ENST00000440381.5	2790	14	-132	43901	-132	-41485	5prime_fragment	FALSE	canonical	3	162	junction_1	18.4518893943743	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGCTGTGGATTACCT	-9	True	NA	NA	False	AAGAAA	-4	NA	73097106	73051124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12101.nnic	chr10	-	769	6	NNC	ENSG00000122884.13	novel	2727	15	NA	NA	0	-53519	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.27400554795	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTGGTATTTTGT	-2	True	NA	NA	False	AATAAA	-20	NA	73096866	73063158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_73063332_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12102.known	chr10	-	2743	15	FSM	ENSG00000122884.13	ENST00000394890.7	2743	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	75.4713420404577	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-2	True	NA	-15	True	TTTAAA	-5	NA	73096866	73007216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12103.known	chr10	-	2844	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.0190415611415	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	364	False	NA	-22	True	NA	NA	NA	73096974	73007223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_12106.known	chr10	+	5455	14	FSM	ENSG00000138286.15	ENST00000242505.11	5455	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	19.0440162836787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGCA	-2	True	NA	NA	False	AAAAAG	-3	NA	73168118	73244504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73168387_73174686_73174792_73177845_73177976_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228185_73230421_73230526_73232938_73233164_73234816_73234941_73235192_73235319_73239311_73239385_73240945
transcript_12110.known	chr10	-	3006	14	FSM	ENSG00000122882.11	ENST00000372979.9	3006	14	0	0	0	0	multi-exon	TRUE	canonical	3	440	junction_8	31.7819866363985	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTTTACAGACAGCTC	-4	True	NA	-23	True	ATTAAA	-13	NA	73168008	73133667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73163732_73163951_73167865
transcript_12116.known	chr10	+	2258	10	FSM	ENSG00000166321.14	ENST00000544879.5	2258	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.30780929444275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	73110374	73131828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73119450_73119523_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73125397_73125510_73126672_73126828_73130702
transcript_12118.known	chr10	+	2101	9	FSM	ENSG00000166321.14	ENST00000357321.9	2101	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.09748712602592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTCTGATGTCTTTT	0	True	NA	NA	False	AATAAA	-14	NA	73110454	73131823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73125397_73125510_73126672_73126828_73130702
transcript_12121.known	chr10	+	1919	8	FSM	ENSG00000166321.14	ENST00000372997.3	1919	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.74664220738176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	17	False	NA	NA	False	AATAAA	-19	NA	73110529	73131828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73126672_73126828_73130702
transcript_12126.known	chr10	+	1835	7	FSM	ENSG00000166321.14	ENST00000349051.9	1835	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.49747416749021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	4	True	NA	NA	False	AATAAA	-19	NA	73110458	73131828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73130702
transcript_12136.known	chr10	-	2295	5	FSM	ENSG00000213551.7	ENST00000372950.6	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	11.7765657133139	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCTGCATTCATGAAT	25	True	NA	0	True	AATAAA	-19	NA	73247255	73241953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009
transcript_12143.nnic	chr10	-	1401	5	NNC	ENSG00000213551.7	novel	2295	5	NA	NA	-12	-877	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	192.428395773597	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTAAGTTCTGGGGGCTT	13	True	NA	-5	True	AATAAA	-16	NA	73247267	73242830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246800_73247009
transcript_12147.known	chr10	+	365	3	FSM	ENSG00000166321.14	ENST00000469925.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATATTTTTACT	7	True	NA	NA	False	AATAAA	-13	NA	73110519	73115168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73110568_73114356_73114449_73114943
transcript_12148.known	chr10	+	834	1	FSM	ENSG00000138286.15	ENST00000607940.1	834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTGGTTTTACGGTC	NA	False	NA	22	True	AATAAA	-28	NA	73230472	73231306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73230500_73231300
transcript_12152.known	chr10	-	866	3	FSM	ENSG00000182180.14	ENST00000372940.3	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	675.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACATAATTTGGCTA	NA	False	NA	-120	True	AAAAAG	-3	NA	73252693	73248937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73249319_73251762_73252024_73252469
transcript_12153.known	chr10	-	2579	3	FSM	ENSG00000182180.14	ENST00000372945.8	2579	3	0	0	0	0	multi-exon	FALSE	canonical	3	1218	junction_1	129	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATTTTCCGTAGCAAA	-18	True	NA	-31	True	AATAAA	-20	NA	73252644	73248848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73250992_73251762_73252024_73252469
transcript_12154.known	chr10	-	2580	3	FSM	ENSG00000182180.14	ENST00000479005.1	2580	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	580.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCGTAGCAAATGTATA	1	True	NA	-25	True	AATAAA	-26	NA	73252625	73248842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73250992_73251762_73252038_73252469
transcript_12155.known	chr10	+	762	2	FSM	ENSG00000227540.1	ENST00000457147.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	9	True	NA	19	True	ATTAAA	-25	NA	73252790	73254349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73253096_73253892
transcript_12157.known	chr10	+	635	2	FSM	ENSG00000227540.1	ENST00000394864.2	635	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	356	False	NA	19	True	ATTAAA	-25	NA	73253168	73254349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73253255_73253800
transcript_12158.known	chr10	-	612	3	FSM	ENSG00000182180.14	ENST00000473427.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	606.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGCCCTTGCTCTTCT	-8	True	NA	-19	True	AATAAA	-11	NA	73252634	73250743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73250992_73251762_73252024_73252531
transcript_12159.known	chr10	-	2174	14	FSM	ENSG00000138279.16	ENST00000372919.8	2174	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	340.764334050597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-11	True	NA	-26	True	AATAAA	-13	NA	73414067	73375444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396043_73396110_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_12162.known	chr10	-	2443	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_12	122.406767242121	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTGTGTCTGGCT	-2	True	NA	-7	True	TATAAA	-13	NA	73414058	73375100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_12167.nic	chr10	-	2067	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	260.379252959795	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-25	True	NA	-26	True	AATAAA	-13	NA	73414081	73375444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_12168.nic	chr10	-	1731	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-5	-132	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	260.379252959795	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTGTAATAATATTGAA	-25	True	NA	0	True	AATAAA	-19	NA	73414081	73375780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_12176.known	chr10	+	935	1	FSM	ENSG00000272791.1	ENST00000609434.1	935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAATGTGGTTTTGTGCG	NA	False	NA	5	True	AATAAA	-17	NA	73630555	73631490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73630600_73631500
transcript_12177.nnic	chr10	-	1502	7	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3526	0	multi-exon	FALSE	canonical	3	26	junction_5	3.43592135468138	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	8588	False	NA	32	True	AATGAA	-43	NA	73647503	73631611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
transcript_12178.nnic	chr10	-	1365	6	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3561	0	multi-exon	FALSE	canonical	3	11	junction_5	9.09065454189081	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	8623	False	NA	32	True	AATGAA	-43	NA	73647468	73631611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73647339
transcript_12179.known	chr10	-	1300	6	FSM	ENSG00000177791.12	ENST00000359322.5	1300	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	3.61109401705356	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-8	True	NA	32	True	AATGAA	-43	NA	73641474	73631611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410
transcript_12184.nic	chr10	-	1582	4	ISM	ENSG00000271816.1	ENST00000580790.1	1913	12	-27	25763	-27	-25763	5prime_fragment	FALSE	canonical	3	16	junction_3	33.5294232312789	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAAAAATAAGCCA	-22	True	NA	NA	False	NA	NA	NA	73730514	73724913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730458
transcript_12185.nic	chr10	-	1403	4	ISM	ENSG00000242338.6	ENST00000584747.5	1716	10	-34	9382	-34	-8110	5prime_fragment	FALSE	canonical	0	0	junction_3	40.4062701404951	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-11	True	NA	NA	False	AATAAA	-25	NA	73730503	73725224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730315
transcript_12187.nic	chr10	-	1271	4	ISM	ENSG00000271816.1	ENST00000580790.1	1913	12	-27	26074	-27	-26074	5prime_fragment	FALSE	canonical	3	16	junction_3	33.5294232312789	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-22	True	NA	NA	False	AATAAA	-25	NA	73730514	73725224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730458
transcript_12188.nnic	chr10	-	530	2	Genic_Genomic	ENSG00000279088.1	novel	1236	1	NA	NA	-268	31	multi-exon	FALSE	canonical	3	70	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGCGTGAATT	NA	False	NA	-3	True	AATAAA	-17	NA	73744498	73742963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr10_-_73743212_73744216
transcript_12189.known	chr10	-	1236	1	FSM	ENSG00000279088.1	ENST00000625041.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	82	False	NA	-34	True	NA	NA	NA	73744230	73742994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_73743000_73744200
transcript_12190.known	chr10	+	4445	23	FSM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_12	47.1211073758945	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-18	True	NA	16	True	AATAAA	-17	NA	73744371	73772161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_12191.nnic	chr10	+	2436	10	NIC	ENSG00000176986.16	novel	4445	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	19	junction_2	168.759380169109	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-18	True	NA	16	True	AATAAA	-17	NA	73744371	73772161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_73744438_73746804_73747005_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_12193.nnic	chr10	+	2237	9	NIC	ENSG00000176986.16	novel	4445	23	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	182.420145200578	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-19	True	NA	16	True	AATAAA	-17	NA	73744370	73772161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_73744438_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_12194.nic	chr10	+	1876	8	ISM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	7623	0	983	5prime_fragment	FALSE	canonical	3	458	junction_1	36.2902134443535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGGTAGGGCCAAAT	-18	True	NA	NA	False	NA	NA	NA	73744371	73764538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855
transcript_12195.known	chr10	+	850	3	FSM	ENSG00000172586.8	ENST00000372833.6	850	3	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	118.5	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCAGATATGTTT	-11	True	NA	8	True	AATAAA	-21	NA	73782047	73783652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73782200_73782322_73782442_73783073
transcript_12196.known	chr10	+	1202	2	FSM	ENSG00000172586.8	ENST00000372837.3	1202	2	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCCTTTTGTTGTGA	-12	True	NA	15	True	AATAAA	-14	NA	73782046	73783371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73782200_73782322
transcript_12201.known	chr10	+	6489	21	FSM	ENSG00000035403.18	ENST00000372755.7	6489	21	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_5	98.3091552196437	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGCAGGAAAGAATCATTT	-9	True	NA	4	True	AATAAA	-17	NA	73998113	74121363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74114183_74114388_74114794_74114900_74118022
transcript_12208.known	chr10	-	2320	10	FSM	ENSG00000185009.13	ENST00000372745.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	122.278774795269	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-26	True	NA	-14	True	ATTAAA	-10	NA	74150842	74122963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150754
transcript_1221.nic	chr1	+	474	3	FSM	ENSG00000249087.8	ENST00000690463.1	706	3	229	3	-30	0	multi-exon	FALSE	canonical	3	11	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	-24	True	NA	17	True	AATAAA	-23	NA	23369192	23371783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23369325_23371138_23371210_23371512
transcript_12212.known	chr10	-	4889	9	FSM	ENSG00000185009.13	ENST00000355264.9	4889	9	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	90.1622669136042	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGGATTAGTTTCATT	-12	True	NA	-5	True	AATAAA	-18	NA	74150828	74120254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150754
transcript_12223.known	chr10	+	1992	11	FSM	ENSG00000156110.15	ENST00000539909.6	1992	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	86.7179912128965	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	-1	True	NA	10	True	AATAAA	-19	NA	74151220	74709290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_12228.known	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	58.5050425177181	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	2	True	NA	10	True	AATAAA	-19	NA	74176762	74709290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_1223.known	chr1	+	606	3	FSM	ENSG00000249087.8	ENST00000437367.4	898	3	286	6	12	0	multi-exon	FALSE	canonical	3	19	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	33	False	NA	17	True	AATAAA	-23	NA	23369249	23371783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23369514_23371138_23371210_23371512
transcript_12234.known	chr10	+	2494	10	FSM	ENSG00000156110.15	ENST00000673352.1	2494	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	161.630885692916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGGCAAGATCAC	5	False	NA	NA	False	NA	NA	NA	74151239	74709926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74670182_74670270_74708320
transcript_12236.known	chr10	+	1249	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	157.143953820127	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTTTTATTTCAT	NA	False	NA	7	True	ATTAAA	-18	NA	74151201	74708699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_1224.known	chr1	+	2547	1	FSM	ENSG00000249087.8	ENST00000335648.3	2547	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAATTGTCATAGTTTT	19	True	NA	16	True	AATAAA	-22	NA	23369235	23371782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23369200_23371800
transcript_12250.known	chr10	+	1188	10	FSM	ENSG00000156110.15	ENST00000673027.1	1188	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.343974812614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTCCTACTATAATAAT	2	True	NA	NA	False	AATAAA	-19	NA	74176762	74708539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_74176887_74200763_74200839_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_12259.known	chr10	+	6761	6	FSM	ENSG00000156671.15	ENST00000542569.6	6761	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	24.1876001289917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTCTTATTGAAAT	1	True	NA	NA	False	AATAAA	-17	NA	75111655	75182123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_75111723_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_1226.known	chr1	-	950	3	FSM	ENSG00000117318.9	ENST00000374561.6	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	4024	junction_1	56.5	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGACACCCGTCTCCA	-1	True	NA	-19	True	AATAAA	-22	NA	23559501	23557925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23558416_23558934_23559020_23559126
transcript_12261.nic	chr10	+	1447	6	NIC	ENSG00000156671.15	novel	6906	6	NA	NA	-10	-3180	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	26.1120661763867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAACTTTGCGTTCTCC	-9	True	NA	19	True	ATTAAA	-21	NA	75111645	75176743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_75111779_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_12262.nnic	chr10	-	1260	6	NNC	ENSG00000079393.21	novel	1556	7	NA	NA	2576	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	4.85798312059645	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAGGTGATCTTTTGG	2674	False	NA	NA	False	AATAAA	-15	NA	75106523	75094438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75103893_75104098_75106397
transcript_12263.nnic	chr10	-	1072	5	NNC	ENSG00000079393.21	novel	1556	7	NA	NA	2560	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	4.60298815988049	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAGGTGATCTTTTGG	2658	False	NA	NA	False	AATAAA	-15	NA	75106539	75094438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75106397
transcript_1227.known	chr1	-	892	2	FSM	ENSG00000117318.9	ENST00000486541.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	3	4137	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTCTTCTTTCCTCC	398	False	NA	NA	False	NA	NA	NA	23559443	23558444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23559020_23559126
transcript_12274.known	chr10	+	1424	10	FSM	ENSG00000165637.14	ENST00000543351.5	1424	10	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	898.449404993589	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAATGGCTCCAAGTA	-14	True	NA	10	True	AATAAA	-11	NA	75210153	75231444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_75210213_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_12284.known	chr10	+	1557	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-45	0	-24	0	multi-exon	FALSE	canonical	3	2595	junction_4	163.671079370249	2700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTCCAAGTATTTG	125	False	NA	14	True	AATAAA	-15	NA	75210750	75231448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_123.known	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4180	junction_1	2926.22647107157	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
transcript_12301.known	chr10	+	1905	3	FSM	ENSG00000272692.2	ENST00000609200.2	1905	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTGTTATTGCCTAT	5123	False	NA	NA	False	AATAAA	-20	NA	75409141	75411842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_75409441_75410129_75410185_75410291
transcript_12304.known	chr10	-	2963	2	FSM	ENSG00000156113.24	ENST00000480683.2	2963	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACCTCTCTGGTGTCTA	1082	False	NA	-10	True	AATAAA	-22	NA	77637821	77634109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_77636516_77637264
transcript_12305.known	chr10	-	896	2	FSM	ENSG00000156113.24	ENST00000481070.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGCCAGCTGCCTT	1114	False	NA	NA	False	AATAAA	-21	NA	77637789	77636198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_77636570_77637264
transcript_12306.known	chr10	-	6610	31	FSM	ENSG00000148606.14	ENST00000372371.8	6610	31	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_18	24.2502004573616	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGAATAGTTACAAATT	-9	True	NA	-30	True	AATAAA	-23	NA	78029515	77975148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_77977627_77980140_77980274_77981427_77981560_77982153_77982319_77982652_77982818_77983919_77984013_77984204_77984299_77985169_77985341_77985902_77985986_77986072_77986160_77991053_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_12308.known	chr10	+	583	7	FSM	ENSG00000138326.21	ENST00000645440.1	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	5092.23546195578	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	-1	True	NA	18	True	AATAAA	-17	NA	78033835	78040701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964_78037983_78040203_78040226_78040614
transcript_1231.known	chr1	+	823	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	4661.59318688364	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	20	False	NA	23	True	AATAAA	-23	NA	23691820	23696425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_12316.known	chr10	+	534	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	0	0	0	multi-exon	FALSE	canonical	3	3781	junction_4	3716.40794316232	4414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	-1	True	NA	14	True	AATAAA	-13	NA	78033862	78040697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
transcript_12323.known	chr10	+	634	5	FSM	ENSG00000138326.21	ENST00000613865.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_4	2889.48874154235	5653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	NA	False	NA	33	True	AATAAA	-32	NA	78033759	78040716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_12324.known	chr10	+	2712	5	FSM	ENSG00000138326.21	ENST00000440692.6	2712	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4943.17597805298	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGTTGGTTTATCTGT	-1	True	NA	26	True	AATAAA	-22	NA	78033862	78056813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78054530
transcript_12327.known	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5095.61463417319	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	28	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_1233.known	chr1	+	1600	5	FSM	ENSG00000142676.14	ENST00000443624.6	1600	5	0	0	0	0	multi-exon	FALSE	canonical	3	6271	junction_1	2911.61488696565	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	5	True	NA	10	True	AATAAA	-39	NA	23691805	23696412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23695909_23696343
transcript_12330.known	chr10	+	1008	4	FSM	ENSG00000138326.21	ENST00000478655.6	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	9029	junction_1	1430.73159218943	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTGTTCTGTGAACT	-1	True	NA	NA	False	AATAGA	-32	NA	78033862	78037883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193
transcript_12331.known	chr10	+	1104	3	FSM	ENSG00000138326.21	ENST00000466129.6	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	9029	junction_1	1522	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTCGTAATCCGCC	22	False	NA	NA	False	NA	NA	NA	78033885	78036529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510
transcript_12335.known	chr10	+	2146	1	FSM	ENSG00000138326.21	ENST00000480662.2	2146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	629	False	NA	18	True	AATAAA	-17	NA	78038555	78040701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78038600_78040700
transcript_12336.known	chr10	+	656	6	FSM	ENSG00000138326.21	ENST00000435275.5	656	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	4766.10866011257	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTGCAGTTTCCT	NA	False	NA	30	True	AATAAA	-29	NA	78033759	78040713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040200_78040226_78040614
transcript_12337.known	chr10	+	569	5	FSM	ENSG00000138326.21	ENST00000485708.7	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	4853.52511067987	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGCTGGTGCAAAAGT	-1	True	NA	NA	False	NA	NA	NA	78033862	78038104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964
transcript_12338.known	chr10	+	2196	6	FSM	ENSG00000108179.14	ENST00000225174.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	20.9322717352895	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGTCTCAAGTATTT	-2	True	NA	NA	False	AATAAA	-1	NA	79347468	79355334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353706
transcript_12339.known	chr10	-	993	7	FSM	ENSG00000225484.7	ENST00000670682.1	993	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	63.9678738812608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGGTGTGGTGGCTCA	297	False	NA	-27	True	AATAAA	-13	NA	79826282	79691503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_79692057_79766270_79766325_79804484_79804528_79806038_79806123_79808762_79808833_79814612_79814717_79826197
transcript_1234.known	chr1	+	1017	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	6271	junction_1	2662.79367582244	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGGTTTCTTTTAC	5	True	NA	NA	False	ATTAAA	-17	NA	23691805	23696835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_12341.known	chr10	-	4096	6	FSM	ENSG00000225484.7	ENST00000665716.1	4096	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	22.6627447587445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCACACTTTTCTTGGT	95	False	NA	NA	False	AATAGA	-31	NA	79826484	79762820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_79766325_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_12345.known	chr10	-	3121	6	FSM	ENSG00000230091.6	ENST00000412298.5	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.22374241638857	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTTTTATTCTCGC	99	False	NA	NA	False	AATACA	-19	NA	80078895	80046859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_80049179_80053395_80053587_80055915_80056127_80056318_80056406_80060789_80060934_80078726
transcript_12349.known	chr10	+	860	5	FSM	ENSG00000133678.14	ENST00000372275.5	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	202.43887966495	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCTGCACTAAGATAAAG	3	True	NA	NA	False	NA	NA	NA	80078681	80091335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_1235.known	chr1	+	879	5	FSM	ENSG00000142676.14	ENST00000458455.2	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	6685	junction_4	2295.02585769747	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTCTGTTGTGTGT	505	False	NA	16	True	AATAAA	-45	NA	23692305	23696418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_12350.known	chr10	+	785	5	FSM	ENSG00000133678.14	ENST00000476173.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	191.108607864743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACACTTCCACTATAT	22	False	NA	NA	False	NA	NA	NA	80079294	80091352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_12352.known	chr10	+	847	5	FSM	ENSG00000133678.14	ENST00000463029.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	209.078932463316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTGACACTTCCACTA	0	True	NA	NA	False	NA	NA	NA	80079272	80091349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079308_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_12357.known	chr10	+	2041	4	FSM	ENSG00000133678.14	ENST00000372281.8	2041	4	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	33.6683167912439	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGCTTTTCTTGTAT	-14	True	NA	26	True	AATAAA	-20	NA	80078664	80092551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090796
transcript_12358.known	chr10	+	824	4	FSM	ENSG00000133678.14	ENST00000472622.5	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	189.209466523803	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTCCTCTCCTTTCCA	NA	False	NA	NA	False	AAAACA	-19	NA	80078645	80091302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80078787_80081840_80081945_80082144_80082218_80090796
transcript_12359.known	chr10	+	2074	4	FSM	ENSG00000133678.14	ENST00000372273.7	2074	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	200.902961650644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	357	False	NA	32	True	AATAAA	-26	NA	80079035	80092557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079185_80081840_80081945_80082144_80082205_80090796
transcript_12360.known	chr10	+	1963	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	196.224927627002	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	-3	True	NA	32	True	AATAAA	-26	NA	80079269	80092557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
transcript_12362.known	chr10	+	776	4	FSM	ENSG00000189129.14	ENST00000372263.4	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.4419672692682	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTATGAAGTGAAAT	0	True	NA	20	True	ATTAAA	-25	NA	80132729	80145359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80132827_80142081_80142180_80144222_80144344_80144899
transcript_12367.known	chr10	+	1863	5	FSM	ENSG00000133665.13	ENST00000256039.3	1863	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.8535710713571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTGTGACTGGCT	-4	True	NA	7	True	TATAAA	-18	NA	80356780	80368073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80356826_80357892_80358046_80362434_80362591_80362950_80363074_80366687
transcript_12368.known	chr10	+	1173	4	FSM	ENSG00000133665.13	ENST00000444807.6	1173	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.5472369909914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAGAAAAGACAA	NA	False	NA	NA	False	GGGGCT	-19	NA	80356296	80367281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80356597_80362434_80362591_80362950_80363074_80366687
transcript_12369.known	chr10	+	439	4	FSM	ENSG00000133665.13	ENST00000411538.5	439	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.93025150224688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTGATTCCAGGAATGC	142	False	NA	NA	False	NA	NA	NA	80356772	80366794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80356826_80362434_80362591_80362950_80363074_80366687
transcript_1237.nnic	chr1	+	2978	14	Fusion	ENSG00000142676.14_ENSG00000011007.13	novel	1017	6	NA	NA	0	-2130	multi-exon	TRUE	canonical	0	0	junction_4	4396.73545785854	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATTATCCCCCA	5	True	NA	11	True	AATAAA	-15	NA	23691805	23759893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_1238.known	chr1	+	2671	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	1	2166	1	-2130	multi-exon	FALSE	canonical	3	368	junction_10	27.258026340878	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATTATCCCCCA	-9	True	NA	11	True	AATAAA	-15	NA	23743471	23759893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_12381.known	chr10	+	5801	6	FSM	ENSG00000122378.14	ENST00000606162.6	5801	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	89.1008417468657	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGATT	25	True	NA	11	True	AATAAA	-25	NA	80408550	80437115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_12383.known	chr10	+	1723	6	FSM	ENSG00000122378.14	ENST00000372185.5	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	168.886470742922	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGTATAAGATTTTC	-32	True	NA	29	True	AATAAA	-19	NA	80408493	80432997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80408644_80420482_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_12391.known	chr10	+	16183	9	FSM	ENSG00000108219.15	ENST00000429989.7	16183	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	32.124756808418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTCATTTTTCTCC	12	False	NA	NA	False	TATAAA	-16	NA	80454165	80533123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_12393.known	chr10	+	959	5	FSM	ENSG00000108219.15	ENST00000469149.1	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	41.8710819062512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCTGTTTAAGAAGCCA	15	True	NA	NA	False	NA	NA	NA	80454328	80509920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300
transcript_12395.known	chr10	+	2382	9	FSM	ENSG00000165678.22	ENST00000372134.6	2382	9	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_1	111.354094558754	772	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTGAGGTGATTGCT	4	True	NA	NA	False	AATGAA	-17	NA	84139508	84153568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_84139594_84141461_84141630_84142654_84142755_84143994_84144107_84144874_84145017_84148729_84148839_84150054_84150244_84150708_84150881_84152263
transcript_12405.known	chr10	+	1724	5	FSM	ENSG00000229404.6	ENST00000653603.1	1724	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	4.38748219369606	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTCTCTCTCATGGTA	NA	False	NA	NA	False	AATAAA	-21	NA	84279967	84290616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_84280066_84288223_84288421_84288593_84288697_84288816_84289045_84289518
transcript_12408.known	chr10	+	7653	10	FSM	ENSG00000107771.17	ENST00000372088.8	7653	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	20.2977831301844	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTTGTCTTTCTCAAC	-13	True	NA	13	True	AATAAA	-23	NA	84328588	84518517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932_84464017_84470371_84470459_84477574_84477665_84513448
transcript_12410.known	chr10	+	2619	2	FSM	ENSG00000270002.1	ENST00000474115.2	2619	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGATTTTAAAATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	85644072	85648066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_85644189_85645563
transcript_12414.nnic	chr10	+	1140	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2546	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10.3846039885977	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	288	False	NA	7	True	AATAAA	-17	NA	86956052	86963258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_86956426_86958587_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_12416.known	chr10	+	756	5	FSM	ENSG00000173267.14	ENST00000372017.4	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	7.79021822544144	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	4	True	NA	7	True	AATAAA	-17	NA	86958598	86963258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_12417.known	chr10	+	794	4	FSM	ENSG00000173267.14	ENST00000483064.1	794	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	7.58653778449403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	-20	True	NA	7	True	AATAAA	-17	NA	86959374	86963258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_86959675_86960000_86960129_86962603_86962676_86962964
transcript_12418.known	chr10	-	3300	13	FSM	ENSG00000148672.10	ENST00000277865.5	3300	13	0	0	0	0	multi-exon	TRUE	canonical	3	620	junction_10	44.1122306043221	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGAGAAAGAGGCTCT	-24	True	NA	NA	False	ATTAAA	-15	NA	87094843	87050201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87060687_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
transcript_1242.nic	chr1	+	1344	4	ISM	ENSG00000011007.13	ENST00000609199.2	5075	10	-23	10153	-23	926	5prime_fragment	FALSE	canonical	3	415	junction_1	8.64098759787715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTGAAAACTTCAGCCA	270	False	NA	-29	True	AAAAAG	-6	NA	23743424	23751870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844
transcript_12422.known	chr10	+	3601	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	43.3564041149376	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	7	True	NA	15	True	AATAAA	-17	NA	87095205	87191465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_12424.known	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	61.3066064955483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	-3	True	NA	13	True	AATAAA	-15	NA	87095195	87191463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
transcript_12427.nnic	chr10	+	2214	8	NNC	ENSG00000122376.12	novel	3402	9	NA	NA	61812	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	90.0680015208464	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	NA	False	NA	15	True	AATAAA	-17	NA	87157017	87191465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_87157260_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_1243.known	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	19	junction_2	7.40870359029762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-3	True	NA	NA	False	NA	NA	NA	23778287	23760381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
transcript_12430.nnic	chr10	-	803	6	NIC	ENSG00000223482.9	novel	5671	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	103.743144351808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTTTGTTTTTATTTA	220	False	NA	-3	True	AATAAA	-20	NA	87342400	87208167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_87208513_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12431.known	chr10	-	855	6	FSM	ENSG00000223482.9	ENST00000433530.7	916	6	61	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	102.455063320463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTCAAAAAGATTGTCCA	-1	True	NA	NA	False	ATTAAA	-40	NA	87342345	87238397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87238850_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12433.known	chr10	-	876	6	FSM	ENSG00000223482.9	ENST00000433920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	104.39042101649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	8	False	NA	-4	True	AATAAA	-18	NA	87342612	87238666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87238873_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12434.known	chr10	-	6174	6	FSM	ENSG00000223482.9	ENST00000663113.1	6174	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	90.4199093120536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAAGTTGTTGAGTGA	184	False	NA	NA	False	ACTAAA	-35	NA	87342436	87240175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12437.nnic	chr10	-	705	5	FSM	ENSG00000223482.9	ENST00000687947.1	1259	5	8	546	-3	0	multi-exon	TRUE	canonical	2	4	junction_1	112.535272248304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTTTGTTTTTATTTA	220	False	NA	-3	True	AATAAA	-20	NA	87342400	87208167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87208513_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12438.known	chr10	-	1014	5	FSM	ENSG00000223482.9	ENST00000655272.2	1039	5	25	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.40348832156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	254	False	NA	NA	False	ATTAAA	-24	NA	87342366	87287958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87288496_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_1244.known	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	23	junction_2	5.55777733351102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-12	True	NA	-3	True	ATTAAA	-18	NA	23778296	23760520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
transcript_12440.known	chr10	-	1446	5	FSM	ENSG00000223482.9	ENST00000417860.7	2036	5	0	590	0	-590	multi-exon	FALSE	canonical	3	24	junction_2	107.264567775198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCCACTTCATGTAACA	-8	True	NA	NA	False	AATAAA	-17	NA	87342391	87319255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87320200_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_12444.known	chr10	-	4023	4	FSM	ENSG00000223482.9	ENST00000654503.2	4041	4	18	0	1	0	multi-exon	FALSE	canonical	3	249	junction_2	14.1970262926979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCATTTCACAATT	-5	True	NA	NA	False	NA	NA	NA	87342388	87284766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87288496_87326629_87326673_87336785_87336890_87342241
transcript_12446.known	chr10	-	1295	4	FSM	ENSG00000223482.9	ENST00000660726.2	1835	4	16	524	0	-522	multi-exon	FALSE	canonical	3	47	junction_1	103.879203351243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGCTTTGCAACATC	6	True	NA	NA	False	AATGAA	-4	NA	87342377	87319187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87320200_87326629_87326673_87336785_87336890_87342241
transcript_12448.known	chr10	-	1586	3	FSM	ENSG00000223482.9	ENST00000656123.1	1586	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	139.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAATTATAGAGGCCAG	6	True	NA	NA	False	AGTAAA	-14	NA	87342377	87332964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87334311_87336785_87336890_87342241
transcript_12452.known	chr10	+	2470	5	FSM	ENSG00000107789.16	ENST00000371996.9	2470	5	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	31.0282129682004	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGACTCACCTGGCAAT	-4	True	NA	88	True	AATACA	-38	NA	87504892	87553461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87505553_87508335_87508534_87513123_87513222_87521035_87521170_87552081
transcript_12453.known	chr10	+	2183	3	FSM	ENSG00000107789.16	ENST00000371994.8	2183	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	175.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAGGACTTTTCTCTTC	0	True	NA	15	True	AATAAA	-20	NA	87504874	87553388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87505553_87508335_87508534_87552081
transcript_12454.known	chr10	+	3699	13	FSM	ENSG00000198682.13	ENST00000456849.2	3699	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	44.2593367425325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	15	True	NA	21	True	AATAAA	-15	NA	87659877	87747705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87721755_87721771_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_12455.known	chr10	+	3949	12	FSM	ENSG00000198682.13	ENST00000361175.8	3949	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	15.178279391593	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	NA	False	NA	21	True	AATAAA	-15	NA	87659612	87747705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_12461.known	chr10	-	4045	11	FSM	ENSG00000138138.14	ENST00000681308.1	4045	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	144.850405591424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAATAAATTGGATG	-10	True	NA	-31	True	NA	NA	NA	87818213	87751877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87789039_87789130_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_12466.known	chr10	-	4640	10	FSM	ENSG00000138138.14	ENST00000308448.11	4640	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	74.9029001070349	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	43	True	NA	NA	False	ATTAAA	-19	NA	87818160	87751511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87817794
transcript_12467.known	chr10	-	4334	10	FSM	ENSG00000138138.14	ENST00000680024.1	4334	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	44.5396203147016	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-23	True	NA	NA	False	ATTAAA	-19	NA	87818226	87751511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_12476.nnic	chr10	-	2646	9	NIC	ENSG00000138138.14	novel	4334	10	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	121.219261567624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTGTTCTCCACTTAAT	-30	True	NA	-19	True	AATAAA	-15	NA	87818233	87753116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_87754808_87756788_87756923_87767672_87767724_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_12480.known	chr10	+	470	2	FSM	ENSG00000223820.5	ENST00000415212.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCAGCTTGTGCCTTT	68	False	NA	NA	False	NA	NA	NA	87818424	87819081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87818715_87818901
transcript_12483.known	chr10	+	8515	9	FSM	ENSG00000171862.12	ENST00000371953.8	8515	9	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	15.1156996199316	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTTTTAAACTTTTTAT	-8	True	NA	12	True	ATTAAA	-21	NA	87863624	87971930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_87864549_87894024_87894110_87925512_87925558_87931045_87931090_87933012_87933252_87952117_87952260_87957852_87958020_87960893_87961119_87965286
transcript_12486.known	chr10	-	2409	7	FSM	ENSG00000184719.12	ENST00000331772.9	2409	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	5.15320827791344	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTAATGTCACTTA	0	True	NA	NA	False	AATAAA	-24	NA	88583318	88284101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_88285507_88314465_88314642_88362551_88362726_88572902_88573062_88581566_88581710_88582201_88582308_88583072
transcript_12487.known	chr10	+	2021	11	FSM	ENSG00000138134.12	ENST00000371926.8	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	5.72712842531054	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTTGTATTTATAGAG	-11	True	NA	8	True	AATAAA	-16	NA	88880244	88923487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88923167
transcript_12488.known	chr10	+	3696	9	FSM	ENSG00000026103.23	ENST00000652046.1	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	4.66201404974288	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGCTGTTGATTAT	-9	True	NA	6	True	ATTAAA	-15	NA	88990797	89017059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89011998_89012082_89013342_89013368_89014118
transcript_12492.known	chr10	+	1044	8	FSM	ENSG00000026103.23	ENST00000357339.6	1044	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.43462252521458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAAAAACAACAAATTCA	-29	True	NA	NA	False	AATGAA	-19	NA	88990777	89014450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89011998_89012082_89013342_89013368_89014118
transcript_12494.known	chr10	+	1076	7	FSM	ENSG00000026103.23	ENST00000484444.5	1076	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.05536398239638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGTTTAAAATCTAGT	13	True	NA	NA	False	NA	NA	NA	88990730	89014619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_88990907_89003028_89003195_89010538_89010601_89010752_89010816_89011998_89012082_89013342_89013368_89014118
transcript_12496.nnic	chr10	-	2558	10	NNC	ENSG00000107798.18	novel	2496	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	71.9938268958604	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	28	True	NA	-8	True	AATAAA	-26	NA	89251807	89213571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251706
transcript_12497.known	chr10	-	2496	10	FSM	ENSG00000107798.18	ENST00000336233.10	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_9	20.4999247213312	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	1	True	NA	-8	True	AATAAA	-26	NA	89251775	89213571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251736
transcript_125.known	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_1144_1987
transcript_12500.nic	chr10	+	406	2	ISM	ENSG00000232110.9	ENST00000680136.1	438	3	1223	-1	-778	0	3prime_fragment	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTGAGCATCTT	1158	False	NA	10	True	AATAAA	-18	NA	89284997	89292125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89285265_89291986
transcript_12501.known	chr10	+	2390	2	FSM	ENSG00000119917.15	ENST00000371818.9	2390	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGAGGTAATTGTGTGG	6	True	NA	NA	False	AATAAA	-23	NA	89327996	89340968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89328079_89338660
transcript_12503.known	chr10	+	4029	2	FSM	ENSG00000152778.10	ENST00000371795.5	4029	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATATTGTCCTGCACCT	-34	True	NA	NA	False	AATAAA	-17	NA	89414567	89420997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89414804_89417204
transcript_12507.known	chr10	-	2703	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	78.4573486395988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-7	True	NA	-34	True	AATAAA	-18	NA	89643887	89582987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
transcript_12509.known	chr10	-	2513	6	FSM	ENSG00000152782.18	ENST00000322191.10	2513	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	106.151589719608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	6	True	NA	-34	True	AATAAA	-18	NA	89643874	89582987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89599251_89599506_89611695_89612049_89643696
transcript_12511.nnic	chr10	-	1165	2	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	11	-8455	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	1288	False	NA	-5	True	AATAAA	-13	NA	89643945	89634149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_89635066_89643696
transcript_12512.known	chr10	+	563	4	FSM	ENSG00000232936.6	ENST00000454174.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	1169	False	NA	6	True	ATTAAA	-16	NA	89645281	89650667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_89645458_89648922_89649022_89650058_89650232_89650552
transcript_12516.nic	chr10	+	2733	20	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-82	37399	-62	26450	5prime_fragment	FALSE	canonical	3	180	junction_17	34.6079746786393	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAGGAAGAAAAAGCAG	NA	False	NA	NA	False	AATGAA	-45	NA	89701527	89737540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386
transcript_12518.nic	chr10	+	3799	20	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-82	36333	-62	27516	5prime_fragment	FALSE	canonical	3	180	junction_17	34.6079746786393	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAGAAAAGTAAGCTAA	NA	False	NA	NA	False	ATTAAA	-29	NA	89701527	89738606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386
transcript_1252.known	chr1	+	1590	6	FSM	ENSG00000057757.10	ENST00000246151.9	1590	6	0	0	0	0	multi-exon	TRUE	canonical	3	390	junction_4	40.0149971885542	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTCTTTTGAG	14	True	NA	17	True	AATAAA	-17	NA	23778417	23788232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23778714_23779437_23779482_23779863_23779942_23785674_23785780_23786314_23786424_23787274
transcript_12521.nic	chr10	+	2239	16	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-82	48443	-62	15406	5prime_fragment	FALSE	canonical	3	183	junction_15	33.0039728248316	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTTAAAAAAGAGAGA	NA	False	NA	43	True	ATTAAA	-43	NA	89701527	89726496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412
transcript_12523.nic	chr10	+	1929	14	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	-62	50918	-62	12926	5prime_fragment	TRUE	canonical	3	188	junction_13	30.1163424545584	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATTAACCTTGGAAT	NA	False	NA	NA	False	GATAAA	-10	NA	89701527	89724016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963
transcript_12531.nic	chr10	+	712	6	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	0	63844	0	0	5prime_fragment	FALSE	canonical	3	229	junction_2	22.8997816583477	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	-12	True	NA	NA	False	NA	NA	NA	89701589	89711090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
transcript_12534.known	chr10	-	3028	3	FSM	ENSG00000148680.16	ENST00000277874.10	3028	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	13.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-9	True	NA	-20	True	AATAAA	-24	NA	90857698	90740822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_90742529_90748838_90749595_90857132
transcript_12539.known	chr10	+	2332	11	FSM	ENSG00000148688.14	ENST00000371703.8	2332	11	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	41.6648532938735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGACCAGGTGAAATT	0	True	NA	12	True	AATAAA	-28	NA	90871973	90902191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569
transcript_12540.known	chr10	+	1466	10	FSM	ENSG00000148688.14	ENST00000487998.5	1466	10	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	43.8330164754074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTTTCATTTGGAG	-1	True	NA	12	True	AATAAA	-13	NA	90871972	90900762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90895484_90895879_90895918_90896312_90896393_90900569
transcript_12541.known	chr10	-	1790	9	FSM	ENSG00000148677.7	ENST00000371697.4	1790	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAGTCCTTCTATAAG	0	True	NA	-15	True	AATAAA	-18	NA	90921087	90912095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_90912977_90915542_90915642_90915781_90915881_90916170_90916270_90917731_90917831_90918864_90918973_90919130_90919269_90920168_90920349_90921000
transcript_12542.nic	chr10	-	344	3	ISM	ENSG00000148677.7	ENST00000371697.4	1790	9	-3	7099	-3	-7099	5prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAAAATACAGGA	-3	True	NA	NA	False	NA	NA	NA	90921090	90919194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_90919269_90920168_90920349_90921000
transcript_12544.known	chr10	+	973	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	10.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTGTATTTTTCCT	6	True	NA	NA	False	AATAAA	-35	NA	91220782	91227960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_91220837_91222688_91222984_91227336
transcript_12546.known	chr10	+	4862	21	FSM	ENSG00000165338.17	ENST00000298068.10	4862	21	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	8.32826512546281	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATAAATGCAAGCTATT	-30	True	NA	66	True	ATTAAA	-18	NA	91410343	91514820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_91410577_91425280_91425411_91460426_91460566_91461253_91461357_91462094_91462185_91478200_91478266_91481093_91481140_91482966_91483077_91484506_91484656_91485179_91485304_91487681_91487779_91491199_91491308_91492351_91492485_91493419_91493509_91496213_91496373_91498107_91498183_91498871_91498960_91499043_91499151_91500501_91500618_91501190_91501335_91512263
transcript_12549.known	chr10	-	2541	2	FSM	ENSG00000119938.9	ENST00000238994.6	2541	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTATATTTTCTTT	-5	True	NA	-4	True	AATAAA	-15	NA	91633071	91628441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_91630867_91632955
transcript_12551.known	chr10	-	609	2	FSM	ENSG00000228701.3	ENST00000432246.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAGAGCCTTCAGAGAG	9337	False	NA	-100	True	AAGAAA	-8	NA	91798196	91782935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_91783161_91797812
transcript_12552.known	chr10	-	377	2	FSM	ENSG00000228701.3	ENST00000432938.1	377	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTAGTTTGTGGTCTT	9242	False	NA	-3	True	AATAAA	-16	NA	91798291	91782838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_91783161_91798236
transcript_12553.known	chr10	+	3922	6	FSM	ENSG00000198060.10	ENST00000358935.3	3922	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	21.2828569510768	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTGTACTTTGTTAAA	-16	True	NA	7	True	AATAAA	-15	NA	92291166	92353964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92291530_92311134_92311338_92340672_92340804_92349348_92349533_92349670_92349838_92351090
transcript_12557.known	chr10	-	5894	25	FSM	ENSG00000119912.18	ENST00000265986.11	5894	25	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_20	27.7318509219193	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-28	True	NA	NA	False	NA	NA	NA	92574093	92451683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_12563.known	chr10	+	5016	22	FSM	ENSG00000138160.7	ENST00000260731.5	5016	22	0	0	0	0	multi-exon	TRUE	canonical	3	274	junction_7	30.0743598465771	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGCTCCATAATTTC	-14	True	NA	39	True	AATAAA	-18	NA	92593129	92655395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92593453_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175_92630365_92632485_92632694_92633622_92633796_92637183_92637310_92637386_92637546_92639793_92639901_92645362_92645643_92648211_92648435_92649834_92649987_92650400_92650518_92653664
transcript_12565.known	chr10	+	808	3	FSM	ENSG00000152804.11	ENST00000492654.3	808	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	10	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAAACTGGATTTAGG	125	False	NA	NA	False	GATAAA	-42	NA	92692031	92694788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92692547_92692701_92692753_92694546
transcript_12566.known	chr10	+	3564	22	FSM	ENSG00000138190.17	ENST00000260762.10	3564	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	6.99983802857636	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTATTTTGTCTAT	8	True	NA	14	True	ATTAAA	-24	NA	92848519	93059490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92919981_92920051_92928338_92928423_92934143_92934191_92934309_92934431_92935813_92935886_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_12568.nic	chr10	+	1002	7	ISM	ENSG00000138190.17	ENST00000443748.6	3310	18	0	143463	0	0	5prime_fragment	FALSE	canonical	3	37	junction_6	4.64279609239471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGTCAAAATGGAGT	-5	True	NA	NA	False	AATAAA	-17	NA	92848467	92916030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757
transcript_12569.known	chr10	+	2714	5	FSM	ENSG00000138190.17	ENST00000371543.5	2714	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGAGCGTGGTGGCGCG	12	False	NA	NA	False	NA	NA	NA	92848484	92901851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598
transcript_12573.known	chr10	+	2245	7	FSM	ENSG00000095596.12	ENST00000371531.5	2245	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2049.02697775202	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCAGAACTGTTCTCTG	1405	False	NA	22	True	AATAAA	-16	NA	93073474	93077884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93073835_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_12576.known	chr10	+	2117	7	FSM	ENSG00000095596.12	ENST00000224356.5	2117	7	0	0	0	0	multi-exon	FALSE	canonical	3	5186	junction_4	300.123169160041	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAACTGTTCTCTGA	1	True	NA	23	True	AATAAA	-17	NA	93073892	93077885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93074124_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_1258.known	chr1	+	1635	10	FSM	ENSG00000011009.11	ENST00000374514.8	1635	10	0	0	0	0	multi-exon	TRUE	canonical	3	1752	junction_1	132.477904050934	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	-9	True	NA	13	True	ATTAAA	-17	NA	23791144	23795539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_12587.known	chr10	+	1456	6	FSM	ENSG00000095596.12	ENST00000624589.3	1456	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2190.87398085787	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAATTTGAAGGTACTT	353	False	NA	22	True	ATTAAA	-29	NA	93074311	93077479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93074533_93074798_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_12588.nic	chr10	-	2182	13	ISM	ENSG00000138119.17	ENST00000358334.9	6680	53	148256	-1	-4165	0	3prime_fragment	FALSE	canonical	3	26	junction_10	8.64098759787715	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTGTTTGTTGTAA	3086	False	NA	-2	True	AATAAA	-16	NA	93333938	93306428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_93307002_93310019_93310168_93310533_93310644_93313019_93313211_93316713_93316814_93319871_93320014_93323077_93323174_93323269_93323359_93325825_93325966_93328762_93328912_93329663_93329835_93333220_93333313_93333757
transcript_12590.nnic	chr10	+	850	5	Antisense	novelGene_ENSG00000213432.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_3	8.66025403784439	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGAGCTTTACTTGTG	NA	False	NA	6	True	AATAAA	-18	NA	93281315	93322696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr10_+_93281527_93313174_93313322_93315662_93315719_93321440_93321576_93322395
transcript_12594.nnic	chr10	+	962	5	Antisense	novelGene_ENSG00000213432.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_3	5.62916512459885	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGAACATTTCCTCTTT	NA	False	NA	4	True	AATAAA	-16	NA	93281168	93322631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr10_+_93281527_93313174_93313322_93315662_93315749_93321440_93321576_93322395
transcript_12596.nnic	chr10	+	855	5	Antisense	novelGene_ENSG00000213432.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_3	5.62916512459885	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGAGCTTTACTTGTG	NA	False	NA	6	True	AATAAA	-18	NA	93281340	93322696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr10_+_93281527_93313174_93313322_93315662_93315749_93321440_93321576_93322395
transcript_12598.nnic	chr10	-	1178	5	NNC	ENSG00000138119.17	novel	4812	34	NA	NA	6661	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	20.0296654989543	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTGTTTGTTGTAA	NA	False	NA	-2	True	AATAAA	-16	NA	93317014	93306428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_93307002_93310019_93310168_93310533_93310644_93313019_93313211_93316858
transcript_126.known	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_-_2200_2400
transcript_12600.nnic	chr10	+	1782	4	Antisense	novelGene_ENSG00000213432.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_3	6.12825877028341	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGAACATTTCCTCTTT	NA	False	NA	4	True	AATAAA	-16	NA	93281168	93322631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr10_+_93281527_93313174_93313322_93315662_93315749_93321440
transcript_12603.known	chr10	+	2658	9	FSM	ENSG00000138180.16	ENST00000371485.8	2658	9	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	32.0407455437604	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	-14	True	NA	13	True	AATAAA	-18	NA	93496611	93529092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_93496924_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_12608.nnic	chr10	-	1454	14	NNC	ENSG00000148690.12	novel	3109	14	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_13	116.68259682732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGGCTTTGGAAGTT	32	True	NA	-15	True	AATAAA	-20	NA	93702532	93669678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702173
transcript_12609.known	chr10	-	3109	14	FSM	ENSG00000148690.12	ENST00000359204.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_13	26.4324527089905	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTGTAGTGTGTAAAAA	-28	True	NA	NA	False	AATAAA	-19	NA	93702592	93667882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_1261.known	chr1	+	868	10	FSM	ENSG00000011009.11	ENST00000374503.7	868	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	628.151963213432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGGAGGCGGGCCCC	20	False	NA	NA	False	NA	NA	NA	23791202	23794955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794551_23794601_23794681
transcript_12623.known	chr10	-	3455	21	FSM	ENSG00000173145.11	ENST00000371361.3	3455	21	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_12	18.2087890865922	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGATATGATAATTT	10	True	NA	-2	True	AATAAA	-25	NA	94362939	94333225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344414_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_12627.nic	chr10	-	1488	11	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-49	13250	-29	0	5prime_fragment	FALSE	canonical	3	178	junction_2	21.2464114617034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	-1	True	NA	43	True	AATAAA	-10	NA	94362988	94346475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_12629.nic	chr10	-	769	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-49	21814	-29	6284	5prime_fragment	FALSE	canonical	3	193	junction_3	16.9776323437634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGAAATTACAGGAG	-1	True	NA	NA	False	NA	NA	NA	94362988	94355039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_12634.known	chr10	+	3131	23	FSM	ENSG00000119969.15	ENST00000394036.5	3131	23	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	156.025830929867	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	63	False	NA	17	True	AATAAA	-17	NA	94545921	94602098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94583987_94584126_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_12639.known	chr10	+	3128	22	FSM	ENSG00000119969.15	ENST00000348459.10	3128	22	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	53.544056499247	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTAAATTATTTCTTC	-22	True	NA	18	True	AATAAA	-18	NA	94545787	94602099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_12642.nic	chr10	+	3104	22	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	76.2461403803661	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	-1	True	NA	17	True	AATAAA	-17	NA	94545765	94602098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_12651.nic	chr10	+	1961	16	ISM	ENSG00000119969.15	ENST00000348459.10	3128	22	0	9811	0	-226	5prime_fragment	FALSE	canonical	3	348	junction_1	53.8648514545638	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACTAAAAAAAAGAGGTCA	-22	True	NA	NA	False	NA	NA	NA	94545787	94592288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228
transcript_12652.nic	chr10	+	1938	16	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	-22	-226	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	82.4501465533365	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACTAAAAAAAAGAGGTCA	-1	True	NA	NA	False	NA	NA	NA	94545765	94592288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228
transcript_1266.nic	chr1	+	1665	10	NIC	ENSG00000011009.11	novel	717	9	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	608.958876756261	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	666	False	NA	13	True	ATTAAA	-17	NA	23791881	23795539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_23792018_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_12665.nic	chr10	+	980	6	ISM	ENSG00000119969.15	ENST00000348459.10	3128	22	-461	39273	-461	5630	5prime_fragment	FALSE	canonical	3	348	junction_1	63.373811625939	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGAAGATGAATCA	NA	False	NA	-40	True	AATAAA	-30	NA	94545326	94562826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811
transcript_12667.nic	chr10	+	527	5	ISM	ENSG00000119969.15	ENST00000348459.10	3128	22	-23	39372	-23	5531	5prime_fragment	FALSE	canonical	3	348	junction_1	69.2761683409237	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCCTTATTCTAGT	-2	True	NA	18	True	NA	NA	NA	94545764	94562727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690
transcript_12669.nic	chr10	+	481	5	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-24	11379	-22	5531	5prime_fragment	FALSE	canonical	3	215	junction_1	124.688612150429	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCCTTATTCTAGT	-1	True	NA	18	True	NA	NA	NA	94545765	94562727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690
transcript_12671.known	chr10	+	400	4	FSM	ENSG00000119969.15	ENST00000630929.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	220.123197828448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTGCAAATTGAGAG	6	True	NA	NA	False	NA	NA	NA	94545815	94557196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94557178
transcript_12674.nic	chr10	+	565	3	ISM	ENSG00000119969.15	ENST00000630929.2	400	4	-182	2947	-154	-2947	5prime_fragment	FALSE	canonical	3	348	junction_1	95	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATGTAACTGACTA	214	False	NA	27	True	NA	NA	NA	94545633	94554249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545953_94546376_94546499_94554125
transcript_12675.nic	chr10	+	388	3	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-24	19857	-22	-2947	5prime_fragment	FALSE	canonical	3	215	junction_1	161.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATGTAACTGACTA	-1	True	NA	27	True	NA	NA	NA	94545765	94554249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_94545908_94546376_94546499_94554125
transcript_12682.known	chr10	-	1431	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_6	176.130081347723	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGTGTCTGTTATC	0	True	NA	-5	True	AATAAA	-16	NA	95291003	95237571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
transcript_12683.known	chr10	-	850	6	FSM	ENSG00000107438.9	ENST00000477757.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	560.944560540523	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAAATCTACTGTGAGA	-9	True	NA	NA	False	NA	NA	NA	95291012	95238009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95290819
transcript_12691.known	chr10	-	5927	25	FSM	ENSG00000095637.23	ENST00000371249.6	5927	25	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_20	22.0548558523212	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	6	True	NA	-1	True	AATAAA	-23	NA	95561378	95311772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95422189_95422217_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
transcript_12693.known	chr10	-	3337	18	FSM	ENSG00000059573.9	ENST00000371221.3	3337	18	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_12	184.727125042977	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGTGCGTGATTGA	-7	True	NA	-19	True	AATAAA	-11	NA	95656706	95605944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633496_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
transcript_12697.known	chr10	-	2552	14	FSM	ENSG00000119977.22	ENST00000614499.5	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	77.191454903112	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	NA	False	NA	-35	True	AATAAA	-14	NA	95693989	95663413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12698.known	chr10	-	2518	14	FSM	ENSG00000119977.22	ENST00000371217.10	2518	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	132.74663324941	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-13	True	NA	-22	True	AATAAA	-27	NA	95693927	95663400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683196_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_127.known	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	505	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_11100_13600
transcript_12704.known	chr10	-	1868	14	FSM	ENSG00000119977.22	ENST00000679485.1	1868	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	170.636296145135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGAGCCACCACGCCCA	-9	True	NA	NA	False	NA	NA	NA	95693923	95678272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95678527_95680471_95680610_95682650_95682805_95683100_95683196_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12705.known	chr10	-	2414	13	FSM	ENSG00000119977.22	ENST00000680144.1	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	135.827300479526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-5	True	NA	-22	True	AATAAA	-27	NA	95693919	95663400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12706.nic	chr10	-	2500	13	NIC	ENSG00000119977.22	novel	2734	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	173.235068299952	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	NA	False	NA	-35	True	AATAAA	-14	NA	95694003	95663413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683196_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12710.nic	chr10	-	1979	13	NIC	ENSG00000119977.22	novel	2734	14	NA	NA	2	-181	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	173.235068299952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGCTTTGGGCTCTG	7	True	NA	-1	True	AATAAA	-19	NA	95693945	95663876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683196_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12716.known	chr10	-	557	3	FSM	ENSG00000119977.22	ENST00000478245.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTGGCCCACATTGG	13	True	NA	NA	False	NA	NA	NA	95693901	95692863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95693039_95693352_95693477_95693643
transcript_12717.known	chr10	-	2235	12	FSM	ENSG00000119977.22	ENST00000680709.1	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	151.761938411491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGTGAGGAAAAATAAA	10	True	NA	27	True	NA	NA	NA	95693942	95663446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95692919_95693039_95693352_95693477_95693643
transcript_12718.known	chr10	-	1464	10	FSM	ENSG00000119977.22	ENST00000371209.5	1464	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	43.9573306011665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAATGCTGCCTCCTT	15	True	NA	NA	False	AATAAA	-29	NA	95693899	95683260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_12719.known	chr10	+	1903	10	FSM	ENSG00000138185.20	ENST00000371207.8	1903	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.94811092476036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCTTTCATAATCTTT	NA	False	NA	-40	True	TTTAAA	-5	NA	95755651	95866654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_95755767_95823236_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356_95845597_95847445_95847707_95860468_95860583_95864723_95864862_95866176
transcript_12720.known	chr10	+	12493	10	FSM	ENSG00000138185.20	ENST00000371205.5	12493	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.54163943344649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGGGACAATTCTAG	2	True	NA	NA	False	AATAAA	-17	NA	95756162	95877266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_95756256_95823236_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356_95845597_95847445_95847707_95860468_95860583_95864723_95864862_95866176
transcript_12726.known	chr10	-	2366	4	FSM	ENSG00000226688.8	ENST00000449419.6	2366	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	32.2593655651606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGTCCAATTAAACCC	-18	True	NA	-39	True	NA	NA	NA	95907890	95873777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95875667_95876517_95876661_95904829_95904936_95907662
transcript_12728.known	chr10	-	3878	3	FSM	ENSG00000226688.8	ENST00000669099.1	3878	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTAAATTTTGAGATGC	-31	True	NA	-30	True	ATTAAA	-40	NA	95907903	95873017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95876661_95904829_95904939_95907777
transcript_12729.known	chr10	-	3965	3	FSM	ENSG00000226688.8	ENST00000657446.1	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAAAATCCCTGGGTAA	-31	True	NA	-58	True	ATTAAA	-18	NA	95907903	95873045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95876661_95904829_95904939_95907662
transcript_12734.known	chr10	-	617	2	FSM	ENSG00000226688.8	ENST00000444375.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGATATAGTATTTTA	9	True	NA	NA	False	TTTAAA	-26	NA	96090199	96088908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_96089308_96089981
transcript_12735.known	chr10	-	389	2	FSM	ENSG00000226688.8	ENST00000427300.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAAACAAAAAGAA	-11	True	NA	NA	False	NA	NA	NA	95907883	95904655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_95904939_95907777
transcript_12742.nnic	chr10	+	1612	6	NIC	ENSG00000177853.15	novel	8294	6	NA	NA	0	1185	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.1417618697729	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAAAAGACAAATATGA	-8	True	NA	NA	False	AAGAAA	-3	NA	96129714	96157204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_96129993_96132585_96132671_96133582_96133649_96155325_96155377_96155923_96156048_96156196
transcript_12743.nic	chr10	+	1634	6	NIC	ENSG00000177853.15	novel	8294	6	NA	NA	0	1185	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	22.2584815295204	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAAAAGACAAATATGA	-8	True	NA	NA	False	AAGAAA	-3	NA	96129714	96157204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_96129993_96132585_96132671_96133582_96133649_96155325_96155399_96155923_96156048_96156196
transcript_12751.known	chr10	-	1474	1	FSM	ENSG00000287009.1	ENST00000669444.1	1474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTTTAGGAAGCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	96130528	96129054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_96129100_96130500
transcript_12752.nic	chr10	-	838	4	ISM	ENSG00000095587.9	ENST00000357947.4	6769	21	33548	63567	33540	-32982	internal_fragment	FALSE	canonical	3	10	junction_1	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATCTGTTATGTCAATAA	NA	False	NA	-45	True	AATAAA	-21	NA	96480378	96428174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_96428749_96432806_96432963_96446090_96446169_96480348
transcript_12753.known	chr10	+	612	1	FSM	ENSG00000236552.2	ENST00000439189.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2741	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	15	False	NA	NA	False	AATACA	-36	NA	96750287	96750899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_96750300_96750900
transcript_12754.known	chr10	+	10342	8	FSM	ENSG00000196233.14	ENST00000371103.8	10342	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	15.0969655012833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCTTGGTTTCTACT	3	True	NA	23	True	AATAAA	-21	NA	96832281	96964441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_12755.known	chr10	+	4717	7	FSM	ENSG00000196233.14	ENST00000676123.1	4717	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	16.532795690183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAGAAAAACTTAAA	2	True	NA	NA	False	NA	NA	NA	96832280	96958889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_96832400_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_12758.known	chr10	+	4811	8	FSM	ENSG00000196233.14	ENST00000676067.1	4811	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	20.3469899493758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTCAAAAAAGAAAAACTT	-25	True	NA	NA	False	NA	NA	NA	96832253	96958886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_96832396_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_12759.known	chr10	-	5390	11	FSM	ENSG00000213390.11	ENST00000358308.7	5390	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	99.9692452707331	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATTTGACTGGTCTAT	NA	False	NA	-5	True	ATTAAA	-20	NA	97292673	97222175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_12762.known	chr10	+	805	2	FSM	ENSG00000225850.4	ENST00000445808.4	806	2	0	1	0	-1	multi-exon	FALSE	canonical	3	48	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGACCCAGTAATTCC	NA	False	NA	NA	False	ATTAAA	-23	NA	97334563	97343203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97334972_97342806
transcript_12763.known	chr10	-	4396	34	FSM	ENSG00000052749.14	ENST00000370992.9	4396	34	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_23	32.88609051704	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-27	True	NA	-12	True	AATAAA	-17	NA	97401340	97356700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
transcript_12766.nic	chr10	-	1571	6	ISM	ENSG00000052749.14	ENST00000370992.9	4396	34	-3	33016	-3	-1720	5prime_fragment	FALSE	canonical	3	259	junction_2	19.8856732347688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAGAGATAATCACACC	-30	True	NA	NA	False	AAGAAA	-7	NA	97401343	97389716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
transcript_12768.known	chr10	+	1802	4	FSM	ENSG00000171314.9	ENST00000334828.6	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	6827	junction_3	261.128746449375	5952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTGATGTGGAAGAC	10	True	NA	1	True	AATAAA	-20	NA	97426190	97433444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97426447_97430378_97430654_97430954_97431136_97432354
transcript_1277.known	chr1	+	842	9	FSM	ENSG00000011009.11	ENST00000495365.5	842	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	660.606539477169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCCTGGCCGGGCCTT	20	False	NA	NA	False	NA	NA	NA	23791202	23794875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_12771.known	chr10	+	1187	4	FSM	ENSG00000171314.9	ENST00000467867.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	3197.02455417534	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCACTCCCTTCATAC	1241	False	NA	NA	False	NA	NA	NA	97427533	97432690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97427929_97430378_97430654_97430954_97431136_97432354
transcript_12775.known	chr10	-	642	9	FSM	ENSG00000171311.13	ENST00000471049.5	642	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	312.364545643388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCAGCTGGTGTGAG	29	False	NA	NA	False	NA	NA	NA	97445973	97436539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438662_97438704_97441170_97441260_97443236_97443312_97445452_97445607_97445731_97445848_97445954
transcript_12779.known	chr10	-	1145	8	FSM	ENSG00000171311.13	ENST00000370902.8	1145	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_7	72.2173589850495	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGTTGGGTTGAAGTC	-4	True	NA	NA	False	NA	NA	NA	97446006	97435908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_12783.known	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	229.138058820441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	9	True	NA	-32	True	AATAAA	-12	NA	97445993	97436247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
transcript_12789.known	chr10	-	564	6	FSM	ENSG00000171311.13	ENST00000485122.6	564	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	251.976506841412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTTTACGCTGTAG	17	True	NA	-117	True	NA	NA	NA	97445985	97436332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97436552_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_12792.known	chr10	-	2113	2	FSM	ENSG00000171311.13	ENST00000489158.1	2113	2	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAATGATTATAGGCAA	-4	True	NA	NA	False	AGTAAA	-2	NA	97446006	97443786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97445848_97445954
transcript_12793.known	chr10	+	1977	12	FSM	ENSG00000171307.19	ENST00000393760.6	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	218.199582610141	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	10	True	NA	22	True	AATAAA	-22	NA	97446174	97457370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_12796.known	chr10	+	1718	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	116.972720255411	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	37	False	NA	18	True	AATAAA	-18	NA	97446201	97457366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_12797.known	chr10	+	1280	8	FSM	ENSG00000171307.19	ENST00000370846.8	1280	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	171.629049441652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACATCCCTTTACTCA	32	False	NA	NA	False	AAGAAA	-24	NA	97446196	97457085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
transcript_12798.nic	chr10	-	3636	32	NIC	ENSG00000155229.21	novel	3532	32	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_29	97.7174567452384	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	368	False	NA	-28	True	AATAAA	-16	NA	97498442	97458323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480240_97480358_97480941_97481043_97484102_97484152_97498272
transcript_128.known	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_2	5534.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_8586_10858_10992_11133
transcript_12800.nic	chr10	-	3498	31	NIC	ENSG00000155229.21	novel	3499	31	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	81.8925854736285	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	368	False	NA	-28	True	AATAAA	-16	NA	97498442	97458323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459506_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_12803.known	chr10	-	3499	31	FSM	ENSG00000155229.21	ENST00000438925.7	3499	31	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	51.6576766372197	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-14	True	NA	-28	True	AATAAA	-16	NA	97498422	97458323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_12807.known	chr10	-	3555	30	FSM	ENSG00000155229.21	ENST00000355839.10	3555	30	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_24	81.2786051356339	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	201	False	NA	-30	True	AATAAA	-14	NA	97498609	97458325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_12810.known	chr10	-	3165	29	FSM	ENSG00000155229.21	ENST00000327238.14	3165	29	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	86.5753402581608	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	24	True	NA	-30	True	AATAAA	-14	NA	97498384	97458325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_12814.known	chr10	-	3401	30	FSM	ENSG00000155229.21	ENST00000415383.5	3401	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	113.97147983776	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	20	True	NA	-28	True	AATAAA	-16	NA	97498388	97458323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466157_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477405_97477854_97477930_97478303_97478390_97480941_97481043_97498272
transcript_12815.known	chr10	-	2333	5	FSM	ENSG00000171160.18	ENST00000307450.11	2333	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	27.0034719989856	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-2	True	NA	-17	True	AATAAA	-19	NA	97633500	97614554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97616412_97616677_97616788_97617207_97617323_97619586_97619684_97633346
transcript_12816.nnic	chr10	-	2236	4	NIC	ENSG00000171160.18	novel	2333	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	77.8588466392869	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-2	True	NA	-17	True	AATAAA	-19	NA	97633500	97614554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_97616412_97616677_97616788_97617207_97617323_97633346
transcript_12818.known	chr10	-	419	2	FSM	ENSG00000171160.18	ENST00000370635.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTAATTCAACCTCCA	7	True	NA	-19	True	AATAAA	-16	NA	97633491	97619409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97619684_97633346
transcript_12819.known	chr10	-	1375	3	FSM	ENSG00000119986.7	ENST00000370626.4	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	18	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGTGAGTCTGTCAC	-12	True	NA	-2	True	AATAAA	-15	NA	97687241	97677423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_97678026_97679618_97679916_97686765
transcript_12820.known	chr10	+	3213	2	FSM	ENSG00000155254.13	ENST00000285605.8	3213	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTCTGTCCTG	-22	True	NA	27	True	GATAAA	-21	NA	97713729	97718150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97715986_97717193
transcript_12821.known	chr10	+	3045	13	FSM	ENSG00000155256.18	ENST00000423811.3	3045	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	57.3504698227389	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-29	True	NA	14	True	AATAAA	-16	NA	97737127	97760895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97752856_97752878_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_12824.known	chr10	+	2997	12	FSM	ENSG00000155256.18	ENST00000359980.5	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	36.2799035963256	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-17	True	NA	14	True	AATAAA	-16	NA	97737139	97760895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_12828.nnic	chr10	+	2941	11	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	36.9020324643508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-36	True	NA	14	True	AATAAA	-16	NA	97737120	97760895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_97737322_97738476_97738675_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_12831.known	chr10	+	2927	11	FSM	ENSG00000155256.18	ENST00000337540.11	2927	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.1722132858625	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	-36	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_97737322_97738476_97738650_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_12837.known	chr10	+	3393	10	FSM	ENSG00000166024.14	ENST00000298999.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	37.8388395405802	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGGTGTTTGTTGGT	-13	True	NA	20	True	ATTAAA	-20	NA	98134656	98244897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_12838.nnic	chr10	+	3362	9	NIC	ENSG00000166024.14	novel	3393	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	27.4883498049628	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	1	True	NA	17	True	ATTAAA	-17	NA	98134629	98244894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_98134707_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_12844.known	chr10	-	2023	16	FSM	ENSG00000119943.13	ENST00000370575.5	2023	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	2.80158685192676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGCTTGTATTTTTT	-11	True	NA	-2	True	ATTAAA	-19	NA	98415182	98383567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98383869_98384946_98385068_98387200_98387308_98388353_98388509_98390597_98390755_98391009_98391083_98392431_98392567_98392941_98393084_98395195_98395294_98395390_98395453_98397344_98397499_98400101_98400258_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_12847.nnic	chr10	-	1884	5	NNC	ENSG00000119943.13	novel	2865	15	NA	NA	-21	11517	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	2.17944947177034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTACCTTGTAAGTAT	9	True	NA	NA	False	AATAAA	-19	NA	98415203	98402430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98403932_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_12849.known	chr10	-	3703	20	FSM	ENSG00000107521.20	ENST00000361490.9	3703	20	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	85.5003847328986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCAGAGATGCTCACA	-13	True	NA	-4	True	AATAAA	-30	NA	98446935	98416197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445405_98446806
transcript_12858.known	chr10	-	1580	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	108.331794860871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAATGGTTGAGGTGTG	9	True	NA	98	True	AATAAA	-16	NA	98446913	98429150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_12866.nic	chr10	-	1511	9	NIC	ENSG00000107521.20	novel	1580	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	103.943193620362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTCAAAATGGTTGAG	-26	True	NA	93	True	AATAAA	-11	NA	98446948	98429155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_1287.known	chr1	+	1072	8	FSM	ENSG00000011009.11	ENST00000374502.7	1072	8	0	0	0	0	multi-exon	FALSE	canonical	3	1752	junction_1	130.029039142832	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCAAGGCCTGGCCGG	5	True	NA	NA	False	NA	NA	NA	23791220	23794870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223
transcript_12871.nic	chr10	-	1405	9	NIC	ENSG00000107521.20	novel	1580	10	NA	NA	-13	-106	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	103.943193620362	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAATAATCATCTAAT	-26	True	NA	-13	True	ATTAAA	-19	NA	98446948	98429261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_12885.known	chr10	-	922	4	FSM	ENSG00000107521.20	ENST00000465957.1	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	119.618839095966	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAAGGAATATATC	-5	True	NA	-29	True	NA	NA	NA	98446927	98442387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_98442958_98443123_98443241_98445299_98445414_98446806
transcript_12886.nnic	chr10	-	1355	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	-21	484	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	171.42993385702	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTAATTTTTGAT	-34	True	NA	-9	True	AATAAA	-19	NA	98446956	98441903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446886
transcript_12889.nnic	chr10	-	1237	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	-21	366	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	171.42993385702	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACAAGTCTATGTATACA	-34	True	NA	-14	True	AATAAA	-18	NA	98446956	98442021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446886
transcript_12893.nnic	chr10	-	834	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	50	-133	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	183.967992385149	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAACGTAAGCTGAACA	110	False	NA	NA	False	NA	NA	NA	98446812	98442520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446646
transcript_129.known	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1086	junction_3	5009.80165941394	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
transcript_12900.known	chr10	-	1978	9	FSM	ENSG00000120053.12	ENST00000370508.7	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	24.3515913237718	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTGATTTTATGAC	20	True	NA	-11	True	AATAAA	-20	NA	99430624	99396869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99397687_99402579_99402723_99403468_99403635_99403723_99403875_99405755_99405861_99406136_99406250_99406725_99406850_99420623_99420806_99430447
transcript_12905.known	chr10	-	716	2	FSM	ENSG00000120053.12	ENST00000471741.1	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACACATGTTAGAAAAAG	20	True	NA	NA	False	NA	NA	NA	99430624	99420266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99420806_99430447
transcript_12906.nic	chr10	+	1121	4	FSM	ENSG00000224934.6	ENST00000692010.1	1123	4	-23	25	-15	0	multi-exon	FALSE	canonical	2	7	junction_3	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	NA	False	NA	-6	True	AATAAA	-1	NA	99430899	99438098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_99431266_99433545_99433632_99433739_99433941_99437630
transcript_12908.nic	chr10	-	1510	2	ISM	ENSG00000155287.11	ENST00000434701.5	1005	3	6940	0	6940	0	3prime_fragment	FALSE	canonical	3	110	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCATTGGGTTTGTCT	7667	False	NA	NA	False	AATAAA	-17	NA	99613207	99610521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_99611367_99612542
transcript_12912.known	chr10	+	8548	13	FSM	ENSG00000198018.7	ENST00000370489.5	8548	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.51280789419331	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATGAGTTGCTACT	15	True	NA	25	True	AATAAA	-33	NA	99659508	99711241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_99659589_99659861_99659965_99661445_99661629_99679260_99679467_99679724_99679876_99685791_99685896_99688693_99688751_99691384_99691519_99695955_99696123_99698533_99698859_99700972_99701059_99702511_99702674_99704451
transcript_12914.known	chr10	+	1332	9	FSM	ENSG00000119929.13	ENST00000370476.10	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	47.2253573305698	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	-32	True	NA	NA	False	AATAAA	-17	NA	99732233	99756134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_12920.known	chr10	-	5030	9	FSM	ENSG00000014919.13	ENST00000016171.6	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	27.1247119800377	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-20	True	NA	NA	False	ATTAAA	-18	NA	99732127	99710867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99714719_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_12921.known	chr10	-	2788	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	65.9014415623816	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTATTTCCTTATAG	7	True	NA	0	True	AATAAA	-20	NA	99732100	99711843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_12933.nnic	chr10	-	1627	8	NIC	ENSG00000014919.13	novel	5030	9	NA	NA	0	536	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	80.9345918829848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGTCTTCTAATATCC	-20	True	NA	NA	False	NA	NA	NA	99732127	99714115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_99714719_99716347_99716462_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_12940.known	chr10	-	837	3	FSM	ENSG00000229278.3	ENST00000452391.2	837	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGGCAACTAA	-19	True	NA	NA	False	NA	NA	NA	99659284	99651594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99652211_99653824_99653906_99659144
transcript_12946.known	chr10	-	4178	14	FSM	ENSG00000107554.17	ENST00000543621.6	4178	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	29.9650684204756	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	NA	False	NA	-5	True	AATAAA	-16	NA	99914082	99875576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99913952
transcript_12947.known	chr10	-	1855	9	FSM	ENSG00000120054.12	ENST00000370418.8	1855	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	0.7806247497998	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTTTGGGAGGCCGAG	-16	True	NA	NA	False	NA	NA	NA	100081869	100042192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065187_100065371_100069713_100069870_100075910_100076108_100081402
transcript_12949.nic	chr10	-	3215	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	84.1162124092772	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGTTTTTTTTTC	3	True	NA	-4	True	AATAAA	-16	NA	100186023	100150093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_12950.known	chr10	-	1453	12	FSM	ENSG00000107566.14	ENST00000407654.7	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_11	74.0261289585984	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGATCTGTTGAATAAT	-7	True	NA	NA	False	AATATA	-22	NA	100186033	100151807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
transcript_12967.known	chr10	-	2591	14	FSM	ENSG00000095485.18	ENST00000354105.10	2591	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	24.8360303262591	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-2	True	NA	-5	True	AATGAA	-23	NA	100267638	100232297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_12978.known	chr10	-	2634	5	FSM	ENSG00000196072.12	ENST00000614731.4	2634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	255.035291675486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATCTTGTCTTTAT	9048	False	NA	NA	False	ATTAAA	-30	NA	100286378	100273279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286300
transcript_12979.known	chr10	-	2619	5	FSM	ENSG00000196072.12	ENST00000370372.7	2619	5	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_1	15.0062486984589	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTCACCTTAATATTT	4	True	NA	NA	False	ATTAAA	-17	NA	100286680	100273292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286604
transcript_12984.known	chr10	+	5245	6	FSM	ENSG00000099194.6	ENST00000370355.3	5245	6	0	0	0	0	multi-exon	FALSE	canonical	3	3705	junction_3	228.074899978055	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGGTCTGGGAGTT	-9	True	NA	24	True	AATAAA	-17	NA	100347232	100364826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100347532_100348063_100348347_100352365_100352497_100354426_100354633_100356531_100356765_100360733
transcript_12987.known	chr10	+	1752	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	19.3448241713959	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	34	False	NA	17	True	TTTAAA	-14	NA	100373565	100383372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
transcript_12988.known	chr10	+	1125	4	FSM	ENSG00000235823.4	ENST00000666045.1	1125	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	24.9977776790036	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	36	False	NA	22	True	AATAAA	-22	NA	100373567	100388360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388040
transcript_12990.known	chr10	+	1209	4	FSM	ENSG00000235823.4	ENST00000665022.1	1209	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	25.694789787469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	40	False	NA	22	True	AATAAA	-22	NA	100373571	100388360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100380894_100381110_100381215_100381449_100388040
transcript_12991.known	chr10	+	2726	3	FSM	ENSG00000235823.4	ENST00000656449.1	2726	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	39	False	NA	17	True	TTTAAA	-14	NA	100373570	100383372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100380982_100381110_100381215
transcript_12993.nic	chr10	+	1559	3	NIC	ENSG00000235823.4	novel	1752	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_2	79	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	3	True	NA	17	True	TTTAAA	-14	NA	100373631	100383372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_100374013_100381215_100381449_100382427
transcript_12994.known	chr10	+	1015	3	FSM	ENSG00000235823.4	ENST00000657502.1	1015	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	64	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	26	False	NA	22	True	AATAAA	-22	NA	100373557	100388360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100381215_100381449_100388033
transcript_12995.known	chr10	+	2499	2	FSM	ENSG00000235823.4	ENST00000664225.1	2499	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTAATTCTAATCACAAA	18	False	NA	58	True	NA	NA	NA	100373711	100383413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100374013_100381215
transcript_12996.known	chr10	+	12927	8	FSM	ENSG00000166135.14	ENST00000299163.7	12927	8	0	0	0	0	multi-exon	TRUE	canonical	3	463	junction_3	52.9065406241641	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTCTCTTTGGAAAAT	1	True	NA	14	True	ATTAAA	-23	NA	100535942	100559998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100536136_100536410_100536662_100540633_100540783_100544950_100545097_100545942_100546050_100546517_100546582_100547139_100547251_100548092
transcript_13.known	ERCC-00040	+	728	1	FSM	ERCC-00040A	DQ883661	728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00040_+_0_700
transcript_13000.known	chr10	-	713	5	FSM	ENSG00000166136.16	ENST00000370322.5	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	1298.61965178415	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTCATTTCCC	NA	False	NA	-24	True	AATAAA	-14	NA	100530000	100523742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529857
transcript_13005.known	chr10	-	678	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	2763	junction_1	340.019117109612	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-1	True	NA	-21	True	AATAAA	-17	NA	100529871	100523739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
transcript_13006.nic	chr10	+	1258	5	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	-1	2650	-1	-2650	5prime_fragment	FALSE	canonical	3	71	junction_4	11.3357840487546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAATTTATAAAAC	-5	True	NA	NA	False	NA	NA	NA	100912961	100924110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383_100918442_100923974
transcript_13007.known	chr10	+	891	1	FSM	ENSG00000119906.13	ENST00000609386.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACTTGGTACTGTCTTTT	29	False	NA	NA	False	AATAAA	-19	NA	100912995	100913886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100913000_100913900
transcript_13008.known	chr10	-	884	6	FSM	ENSG00000055950.17	ENST00000370242.8	884	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	229.400435919377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGTGTCTCATACAGTG	-15	True	NA	NA	False	NA	NA	NA	100987497	100979197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100979373_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_13009.known	chr10	-	894	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	217.448476655966	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCCAGGCTCTGTG	-33	True	NA	-9	True	AGTAAA	-17	NA	100987515	100981376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_13010.known	chr10	-	727	6	FSM	ENSG00000055950.17	ENST00000448244.5	727	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	223.161466207766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	49	False	NA	-8	True	AGTAAA	-18	NA	100987433	100981375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100981544_100983754_100983818_100984033_100984075_100986748_100986976_100987089_100987197_100987312
transcript_13011.known	chr10	+	3616	5	FSM	ENSG00000107815.10	ENST00000311916.8	3616	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	14.972892172189	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCTTTTTCT	-10	True	NA	14	True	ACTAAA	-17	NA	100987542	100994403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_13012.known	chr10	+	3665	5	FSM	ENSG00000107815.10	ENST00000370228.2	3665	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	37.5566239164278	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	-17	True	NA	12	True	ACTAAA	-15	NA	100987535	100994401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991055_100993189
transcript_13013.known	chr10	+	946	5	FSM	ENSG00000107815.10	ENST00000473656.5	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	43.1074239545812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCCTGTGGTCCTGA	-3	True	NA	NA	False	CATAAA	-15	NA	100987549	100993580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_100987614_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_13017.known	chr10	-	747	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	209.58590124338	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-12	True	NA	-8	True	AGTAAA	-18	NA	100987494	100981375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_13018.known	chr10	-	866	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	222.366564233225	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-1	True	NA	-36	True	AATAAA	-17	NA	100987483	100986273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
transcript_13019.known	chr10	-	798	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	225.658050057062	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTTCAGGTCTGTCT	-1	True	NA	-42	True	AATAAA	-11	NA	100987483	100986279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
transcript_13021.known	chr10	-	1010	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-18	7	0	0	multi-exon	FALSE	canonical	3	470	junction_1	19.5	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-33	True	NA	-38	True	AATAAA	-15	NA	100987515	100986275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986976_100987089_100987197_100987312
transcript_13022.known	chr10	-	810	2	FSM	ENSG00000055950.17	ENST00000487059.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCTTTCCAGTGCCT	-31	True	NA	NA	False	AATGAA	-7	NA	100987513	100986587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100987197_100987312
transcript_13023.known	chr10	-	903	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-33	True	NA	-38	True	AATAAA	-15	NA	100987515	100986275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986976_100987312
transcript_13024.known	chr10	-	2134	5	FSM	ENSG00000055950.17	ENST00000318325.6	2134	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	229.521649305681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTCTGAGTCTCTTCT	-15	True	NA	-6	True	AATAAA	-16	NA	100987497	100977820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100979373_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_13025.known	chr10	-	897	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	196	False	NA	-38	True	AATAAA	-15	NA	100987286	100986275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_100986976_100987089
transcript_13026.known	chr10	-	1057	4	FSM	ENSG00000186862.20	ENST00000470414.1	1057	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGGCAACATAGCAAGA	9	True	NA	NA	False	AAAACA	-45	NA	101031114	101023127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101023611_101023927_101024069_101029993_101030385_101031072
transcript_13031.known	chr10	+	6024	15	FSM	ENSG00000166167.18	ENST00000370187.8	6024	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	30.6454377867711	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGCGTCTTGTCTC	35	True	NA	16	True	ATTAAA	-6	NA	101354164	101557313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101354229_101430344_101430453_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_13034.known	chr10	+	6084	14	FSM	ENSG00000166167.18	ENST00000393441.8	6084	14	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_2	48.4886371121532	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTCTTGTCTCCTTGCC	-3	True	NA	22	True	ATTAAA	-12	NA	101354032	101557319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101354229_101430344_101430453_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_13035.known	chr10	+	5982	14	FSM	ENSG00000166167.18	ENST00000408038.6	5982	14	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	30.7555738922847	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTTGTCTCCTTGCCCC	-23	True	NA	24	True	ATTAAA	-14	NA	101354106	101557321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101354229_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_13041.nnic	chr10	+	1235	3	NNC	ENSG00000166167.18	novel	527	5	NA	NA	0	-84434	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	46.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATATGTACATTATTTG	18	False	NA	NA	False	AATAAA	-19	NA	101354068	101437278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_101354229_101430344_101430453_101436311
transcript_13043.known	chr10	-	2670	9	FSM	ENSG00000166169.17	ENST00000299206.8	2670	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_8	20.3803673911929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-3	True	NA	-5	True	AGTAAA	-18	NA	101588209	101578881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587884
transcript_13045.nic	chr10	-	2396	9	NIC	ENSG00000166169.17	novel	2781	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	12	junction_8	22.9479710432099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-48	True	NA	-5	True	AGTAAA	-18	NA	101588254	101578881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101588203
transcript_13055.known	chr10	+	641	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	218.585350734114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGACTGCAAGACCCA	20	True	NA	NA	False	ACTAAA	-26	NA	101588324	101609447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
transcript_1306.known	chr1	-	1488	12	FSM	ENSG00000117308.15	ENST00000374497.7	1488	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	118.253265116629	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	373	False	NA	-7	True	AATAAA	-21	NA	23800402	23795599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800386
transcript_13061.known	chr10	+	819	6	FSM	ENSG00000166171.13	ENST00000370151.9	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	25.5859336354959	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	16	True	NA	32	True	AGTAAA	-24	NA	101588320	101609662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101608834_101608938_101609366
transcript_13065.known	chr10	-	784	6	FSM	ENSG00000166169.17	ENST00000429502.1	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	35.9833294735215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCGAGTTTGCCTGTGC	-26	True	NA	NA	False	NA	NA	NA	101588232	101579695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101588203
transcript_1307.known	chr1	-	1516	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	93.110260772683	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	0	True	NA	-6	True	AATAAA	-22	NA	23800754	23795598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_13092.known	chr10	-	877	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	4.42718872423573	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTGGCTTCTTCC	-9	True	NA	-7	True	AATAAA	-20	NA	101783413	101781324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
transcript_13093.known	chr10	-	755	5	FSM	ENSG00000107833.10	ENST00000474993.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	19.1702895126808	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGCTCTTGTGTGGC	6311	False	NA	-14	True	AATAAA	-13	NA	101783384	101781331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101783272
transcript_13095.known	chr10	-	5174	16	FSM	ENSG00000198408.14	ENST00000361464.8	5174	16	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_2	245.071327485603	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCGTGTTGTATTGT	-2	True	NA	-13	True	AATAAA	-13	NA	101818444	101784449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_13096.known	chr10	-	3314	10	FSM	ENSG00000198408.14	ENST00000370094.7	3314	10	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	270.656723043037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	24	False	NA	NA	False	NA	NA	NA	101818418	101797045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_13098.known	chr10	-	2089	8	FSM	ENSG00000120049.20	ENST00000348850.9	2089	8	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	2.43276948084663	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-16	True	NA	-5	True	AATAAA	-17	NA	101839872	101825973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_131.known	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8723.12040810632	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_13100.nic	chr10	-	2380	7	NIC	ENSG00000120049.20	novel	2089	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	17	junction_2	2.51661147842358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-19	True	NA	-5	True	AATAAA	-17	NA	101839875	101825973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_13102.known	chr10	+	1234	3	FSM	ENSG00000226009.2	ENST00000412353.2	1234	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTCTACAGGCGCCA	-5	True	NA	NA	False	AATAAA	-16	NA	101818799	101828885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_101819249_101827859_101827940_101828180
transcript_13103.known	chr10	-	4099	26	FSM	ENSG00000120029.13	ENST00000370033.9	4099	26	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	19.9798298291052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-17	True	NA	-3	True	ATTAAA	-23	NA	102056173	101845598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_13106.nnic	chr10	-	2185	26	NNC	ENSG00000120029.13	novel	724	5	NA	NA	16	-3852	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	29.9761505200384	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTCTTATGGAATCACG	-1	True	NA	NA	False	AATAAA	-15	NA	102056157	101849450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_101849575_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_13108.known	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	16.0526477566786	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-37	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_13110.known	chr10	-	2285	11	FSM	ENSG00000198728.11	ENST00000361198.9	2285	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	66.0608810113822	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	0	True	NA	-2	True	ATTAAA	-21	NA	102114946	102107559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102108324_102109028_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_13115.known	chr10	+	2441	13	FSM	ENSG00000166197.17	ENST00000488254.6	2441	13	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_2	231.493145446877	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGTGATTTTCAAA	12	False	NA	5	True	ATTAAA	-15	NA	102152403	102162600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13119.known	chr10	+	3967	13	FSM	ENSG00000166197.17	ENST00000405356.5	3967	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	376.555182616779	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGAGTTTTATTATTGT	-14	True	NA	16	True	AATAAA	-21	NA	102152175	102163871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_1312.nic	chr1	-	1449	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	97.5356345137509	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	NA	False	NA	-6	True	AATAAA	-22	NA	23800813	23795598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365_23799437_23800711
transcript_13123.known	chr10	+	3723	13	FSM	ENSG00000166197.17	ENST00000605788.6	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_2	234.427968088755	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	-3	True	NA	15	True	AATAAA	-20	NA	102152388	102163870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13127.known	chr10	+	3727	13	FSM	ENSG00000166197.17	ENST00000370007.5	3727	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	376.555182616779	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	6	False	NA	15	True	AATAAA	-20	NA	102152414	102163870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13135.nic	chr10	+	1896	11	ISM	ENSG00000166197.17	ENST00000488254.6	2441	13	-46	946	-31	-945	5prime_fragment	FALSE	canonical	3	773	junction_2	248.694692343846	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	3	False	NA	NA	False	GATAAA	-30	NA	102152357	102161654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_13140.nic	chr10	+	1955	11	ISM	ENSG00000166197.17	ENST00000605788.6	3723	13	-93	2216	-93	-945	5prime_fragment	FALSE	canonical	3	758	junction_2	252.051185277911	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	48	False	NA	NA	False	GATAAA	-30	NA	102152295	102161654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_1315.known	chr1	-	1563	11	FSM	ENSG00000117308.15	ENST00000459934.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.6477854331577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCTCTGAAAGAGCTT	1	True	NA	-68	True	NA	NA	NA	23800753	23795660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_13153.known	chr10	+	3217	9	FSM	ENSG00000166197.17	ENST00000603946.5	3217	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	444.154657045268	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	12	False	NA	11	True	AATAAA	-16	NA	102152403	102163866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102152531_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_13165.known	chr10	+	1400	4	FSM	ENSG00000119915.5	ENST00000370005.4	1400	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAGTTGGGGGATTT	-1	True	NA	NA	False	ATTAAA	-14	NA	102226298	102229589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102226650_102227625_102227758_102228416_102228569_102228824
transcript_13166.nic	chr10	+	2413	17	ISM	ENSG00000107862.7	ENST00000676807.1	3713	27	-65	6507	-16	0	5prime_fragment	FALSE	canonical	3	78	junction_16	13.4605906259718	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATACATGTATTCCCCA	NA	False	NA	NA	False	ATTAAA	-13	NA	102245481	102363798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709
transcript_13169.known	chr10	+	1634	12	FSM	ENSG00000077150.20	ENST00000467116.5	1634	12	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	8.57152695732594	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	-5	True	NA	NA	False	NA	NA	NA	102395705	102399218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738
transcript_13176.known	chr10	-	1100	9	FSM	ENSG00000107874.11	ENST00000369937.5	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_4	46.8341488659717	838	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGTGCATTCTGGTC	19	True	NA	-8	True	AGTAAA	-15	NA	102432574	102423248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102423573_102423656_102423718_102423797_102423860_102423995_102424179_102424263_102424395_102424498_102424561_102424648_102424793_102425114_102425199_102432525
transcript_1319.known	chr1	-	1801	10	FSM	ENSG00000117308.15	ENST00000481736.5	1801	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	102.594611559222	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-6	True	NA	-6	True	AATAAA	-22	NA	23800781	23795598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798731_23799365_23799437_23800711
transcript_13196.known	chr10	+	1483	5	FSM	ENSG00000269609.6	ENST00000663480.1	1483	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	41.9195658374464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTTGTCTTGTTTT	13	True	NA	-4	True	NA	NA	NA	102449869	102456267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102450023_102450186_102450331_102451398_102451556_102452089_102452188_102455336
transcript_13199.nnic	chr10	+	1385	4	NIC	ENSG00000269609.6	novel	1556	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	46.5403051128804	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	-20	True	NA	22	True	AATAAA	-20	NA	102449836	102456293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_102450023_102450186_102450331_102452089_102452188_102455336
transcript_13200.known	chr10	+	1312	3	FSM	ENSG00000269609.6	ENST00000473970.3	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	8	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	NA	False	NA	26	True	AATAAA	-24	NA	102449815	102456297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102450023_102450186_102450331_102455336
transcript_13201.known	chr10	+	1178	3	FSM	ENSG00000269609.6	ENST00000669625.1	1178	3	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	52.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	123	False	NA	26	True	AATAAA	-24	NA	102449979	102456297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102450023_102450186_102450361_102455336
transcript_13204.known	chr10	-	2830	11	FSM	ENSG00000138107.13	ENST00000369905.9	2830	11	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	53.0456407256996	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	5	True	NA	-11	True	AATAAA	-22	NA	102502712	102479228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
transcript_13207.nic	chr10	-	2790	10	NIC	ENSG00000138107.13	novel	2830	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	256.148008911129	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	NA	False	NA	-11	True	AATAAA	-22	NA	102502737	102479228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102502599
transcript_13229.known	chr10	-	3834	6	FSM	ENSG00000138175.9	ENST00000260746.6	3834	6	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_5	148.070253596055	802	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTGGAATGTGTTGT	14	True	NA	-10	True	AATAAA	-17	NA	102714397	102673730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_102676942_102685815_102686002_102689892_102689944_102699372_102699490_102705345_102705490_102714272
transcript_13235.known	chr10	+	6770	12	FSM	ENSG00000156398.13	ENST00000369893.10	6770	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	15.2662323852242	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTCTTCAGGAGC	13	True	NA	NA	False	ATTAAA	-18	NA	102714635	102743492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_13238.known	chr10	+	1723	13	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	46	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	23.7034631787565	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACATCTTTGAATCAAG	42	False	NA	NA	False	AATAAA	-16	NA	102869515	102901894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890655_102890655_102890679_102900592_102900800_102901474
transcript_13242.known	chr10	+	2450	11	FSM	ENSG00000214435.9	ENST00000369880.8	2450	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.62193325245732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	-4	True	NA	NA	False	AATAAA	-21	NA	102869469	102901899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_13250.nnic	chr10	+	1689	10	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	163	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.1592459012783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	60	False	NA	NA	False	AATAAA	-21	NA	102869632	102901899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_102869846_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592_102900769_102901449
transcript_13253.nnic	chr10	+	1579	9	NIC	ENSG00000214435.9	novel	2450	11	NA	NA	163	-791	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	18.6530828551208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAGAAAAAGAA	60	False	NA	NA	False	NA	NA	NA	102869632	102901108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_102869846_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_13255.known	chr10	+	838	6	FSM	ENSG00000166275.16	ENST00000369883.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	23.6186367091752	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTCATATTGTTATTG	-7	True	NA	NA	False	AATAAA	-23	NA	102854261	102864213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872_102862933_102863729
transcript_13261.known	chr10	+	2386	5	FSM	ENSG00000166275.16	ENST00000339834.10	2386	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	4.94974746830583	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAGGGATAGAGTGGAA	-10	True	NA	NA	False	AAGAAA	-22	NA	102854258	102864961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872
transcript_13268.nic	chr10	-	3319	19	NIC	ENSG00000076685.19	novel	3614	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_13	108.726409389648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	3945	False	NA	-31	True	AATAAA	-7	NA	103193312	103088163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_1327.nnic	chr1	-	1477	9	NIC	ENSG00000117305.15	novel	1570	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	82.7432021376983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	-13	True	NA	-10	True	ATTAAA	-21	NA	23825444	23801884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_23802565_23804399_23804526_23808134_23808216_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_13271.known	chr10	-	3525	19	FSM	ENSG00000076685.19	ENST00000404739.8	3525	19	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_17	92.3316118304553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	6	True	NA	-9	True	AATAAA	-15	NA	103193272	103088037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181184_103181329_103193235
transcript_13272.nnic	chr10	-	3395	19	NNC	ENSG00000076685.19	novel	3192	20	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_17	90.6268294834495	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	3943	False	NA	-31	True	AATAAA	-7	NA	103193314	103088163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
transcript_13274.known	chr10	-	3435	18	FSM	ENSG00000076685.19	ENST00000343289.9	3435	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	56.5892747856097	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	3951	False	NA	11	True	AATAAA	-35	NA	103193306	103088017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_13276.nic	chr10	-	3245	18	NIC	ENSG00000076685.19	novel	3614	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_16	127.294008915904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	3945	False	NA	-31	True	AATAAA	-7	NA	103193312	103088163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103174857_103174983_103193235
transcript_1328.known	chr1	-	1570	9	FSM	ENSG00000117305.15	ENST00000374490.8	1570	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	27.2304976083802	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	2	True	NA	-10	True	ATTAAA	-21	NA	23825429	23801884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_13286.known	chr10	-	2236	10	FSM	ENSG00000156374.16	ENST00000369847.4	2236	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	24.5029602645965	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	5	True	NA	0	True	AATAAA	-17	NA	103351140	103302795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_13287.known	chr10	-	1868	10	FSM	ENSG00000156374.16	ENST00000490296.1	1868	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	56.3371683989343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAGAAGTTTACAGAA	20	True	NA	NA	False	AATAAA	-13	NA	103351081	103303126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347320_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_13288.nnic	chr10	-	1944	8	NIC	ENSG00000156374.16	novel	2236	10	NA	NA	115	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	60.4270516526214	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	11	True	NA	0	True	AATAAA	-17	NA	103350964	103302795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103348715_103348813_103348899_103349000_103350706
transcript_13289.known	chr10	-	1950	7	FSM	ENSG00000156374.16	ENST00000337211.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	66.9271992541149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	22	True	NA	0	True	AATAAA	-17	NA	103351079	103302795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103348715_103348813_103348899_103349000_103350706
transcript_13292.known	chr10	-	882	6	FSM	ENSG00000173915.16	ENST00000369825.6	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	2943.7000118898	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTACAAGATATCAA	NA	False	NA	7	True	AATAAA	-26	NA	103396492	103389040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103395745_103396033_103396408
transcript_13295.known	chr10	-	560	5	FSM	ENSG00000173915.16	ENST00000337003.4	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	3000.45832957233	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	0	True	NA	-2	True	AATAAA	-17	NA	103396466	103389049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103396408
transcript_13298.known	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	2912.36899919979	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-9	True	NA	-2	True	AATAAA	-17	NA	103396475	103389049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
transcript_133.known	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9244.75309212609	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
transcript_13303.known	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5119	junction_3	515.528423615571	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	0	True	NA	-2	True	AATAAA	-17	NA	103396466	103389049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
transcript_13306.known	chr10	-	635	4	FSM	ENSG00000173915.16	ENST00000369811.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_3	2681.47732913532	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	392	False	NA	-2	True	AATAAA	-17	NA	103396074	103389049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745
transcript_13307.known	chr10	+	6477	36	FSM	ENSG00000148843.15	ENST00000369797.8	6477	36	0	0	0	0	multi-exon	TRUE	canonical	3	257	junction_15	39.954218698865	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTGTCCTGAGAGC	-24	True	NA	17	True	ATTAAA	-17	NA	103396625	103446294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825_103441976_103442212_103442461_103443164_103443334_103443914_103444069_103444516_103444683_103445377
transcript_1331.nnic	chr1	-	1521	8	NIC	ENSG00000117305.15	novel	1570	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	86.8773472741183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	-13	True	NA	-10	True	ATTAAA	-21	NA	23825444	23801884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_23802565_23804399_23804526_23808134_23808324_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_13310.nic	chr10	+	1646	11	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	26914	5850	815	-5293	internal_fragment	FALSE	canonical	3	266	junction_1	30.4309053430883	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGGAAAAGAAAAATCAGAA	NA	False	NA	7	True	AAAACA	-25	NA	103423539	103440431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289
transcript_13311.nnic	chr10	+	350	4	NNC	ENSG00000148843.15	novel	732	6	NA	NA	0	-4644	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	161.969132861789	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGAAGGGGCCAGCAA	-24	True	NA	NA	False	AAGAAA	-4	NA	103396625	103400431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_103396731_103398415_103398529_103399733_103399831_103400396
transcript_13312.nic	chr10	+	253	3	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	0	45850	0	-4644	5prime_fragment	FALSE	canonical	3	275	junction_2	41	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGAAGGGGCCAGCAA	-24	True	NA	NA	False	AAGAAA	-4	NA	103396625	103400431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_103396731_103398415_103398529_103400396
transcript_13314.known	chr10	-	1843	4	FSM	ENSG00000138172.11	ENST00000369788.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	3	True	NA	NA	False	GATAAA	-20	NA	103452402	103446785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103447569_103449386_103450100_103451082_103451183_103452155
transcript_13317.known	chr10	-	1414	11	FSM	ENSG00000107960.11	ENST00000466828.5	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	49.8438561911094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	52	True	NA	-54	True	AATAAA	-13	NA	103918130	103882554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898292_103898378_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_13318.known	chr10	-	6369	10	FSM	ENSG00000107960.11	ENST00000224950.8	6369	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	10.6504506367305	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGCAAAAGGTTCTGTG	-2	True	NA	-7	True	AATAAA	-20	NA	103918184	103877568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_13322.known	chr10	-	1311	9	FSM	ENSG00000107960.11	ENST00000369764.1	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	10.7935165724615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	5	True	NA	-54	True	AATAAA	-13	NA	103917669	103882554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461
transcript_13323.known	chr10	+	1503	4	FSM	ENSG00000156384.15	ENST00000369729.7	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	50.7630661888039	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTGTCTCTTCAAA	19	False	NA	12	True	ATTAAA	-21	NA	104122057	104126385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104122155_104122964_104123087_104123713_104124125_104125512
transcript_13324.known	chr10	+	1430	4	FSM	ENSG00000156384.15	ENST00000369727.4	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	32.5610537640019	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCCTGTCTCTTCA	8	True	NA	10	True	ATTAAA	-19	NA	104122170	104126383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104122197_104122964_104123087_104123713_104124125_104125512
transcript_13334.known	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	346.124486276253	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	17	False	NA	24	True	AATAAA	-32	NA	104254193	104267459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_13336.known	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	54.2387315485899	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	-5	True	NA	20	True	AATAAA	-28	NA	104254891	104267455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_13338.known	chr10	+	900	5	FSM	ENSG00000148834.13	ENST00000369710.8	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	353.458979232386	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	533	False	NA	24	True	AATAAA	-32	NA	104254709	104267459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104266083_104266191_104267251
transcript_13341.known	chr10	+	6715	7	FSM	ENSG00000065621.15	ENST00000338595.7	6715	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.6161810688017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAATCTCGCTACTCTG	2	True	NA	14	True	AATAAA	-28	NA	104269183	104304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_13343.nic	chr10	+	791	5	NIC	ENSG00000065621.15	novel	6715	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	35.7657308047802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGATAATCATTTGT	-17	True	NA	18	True	AATAAA	-19	NA	104274881	104299418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_104274950_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_13344.known	chr10	+	6423	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	24.8231242997331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCAGAATCTCGCTA	9	True	NA	9	True	AATAAA	-23	NA	104275161	104304945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_13345.known	chr10	+	669	4	FSM	ENSG00000065621.15	ENST00000473401.5	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	49.6655480858378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCTTCTGATAATCAT	-1	True	NA	14	True	AATAAA	-15	NA	104274897	104299414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_104274950_104277893_104278117_104297577_104297685_104299127
transcript_13346.nic	chr10	+	791	4	ISM	ENSG00000065621.15	ENST00000450629.6	1391	6	6292	-1	3	0	3prime_fragment	FALSE	canonical	3	27	junction_2	47.5254317883243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGATAATCATTTGT	12	True	NA	18	True	AATAAA	-19	NA	104275164	104299418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_104275335_104277893_104278117_104297577_104297685_104299127
transcript_13347.nic	chr10	+	1102	3	ISM	ENSG00000065621.15	ENST00000477078.2	763	7	-38	11464	-16	-11464	5prime_fragment	FALSE	canonical	3	37	junction_1	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCCAGAGGT	-17	True	NA	NA	False	NA	NA	NA	104274881	104280180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_104274950_104277893_104278117_104279369
transcript_13349.known	chr10	-	795	2	FSM	ENSG00000231233.2	ENST00000435434.2	1134	2	49	290	49	-290	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAACAATCCATTCTTT	-4	True	NA	NA	False	NA	NA	NA	104353575	104351590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_104351928_104353117
transcript_1335.known	chr1	-	1354	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	77.8897012162427	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	3	True	NA	-12	True	ATTAAA	-19	NA	23825428	23801886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_13361.nnic	chr10	+	673	3	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_2	42.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTCATGCTATCTT	NA	False	NA	9	True	AGTAAA	-43	NA	107367783	107543533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr10_+_107367934_107379595_107379720_107543134
transcript_13364.nnic	chr10	+	669	3	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTCATGCTATCTT	NA	False	NA	9	True	AGTAAA	-43	NA	107367792	107543533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr10_+_107367934_107477756_107477886_107543134
transcript_13369.known	chr10	-	2497	21	FSM	ENSG00000108039.18	ENST00000502935.6	2497	21	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	24.6777227474498	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-39	True	NA	-5	True	AATAAA	-16	NA	109923511	109864765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_13373.nic	chr10	-	2448	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_19	57.4143707820539	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	1	True	NA	-5	True	AATAAA	-16	NA	109923551	109864765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109923401
transcript_13374.nic	chr10	-	2415	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_18	61.4510592828196	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-2	True	NA	-5	True	AATAAA	-16	NA	109923554	109864765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109915010_109915100_109923401
transcript_13378.known	chr10	-	2467	20	FSM	ENSG00000108039.18	ENST00000322238.12	2467	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	61.5820062218235	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-1	True	NA	-5	True	AATAAA	-16	NA	109923553	109864765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_13380.nnic	chr10	-	2366	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	61.7596090295204	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-2	True	NA	-5	True	AATAAA	-16	NA	109923554	109864765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_13386.nic	chr10	-	2279	18	NIC	ENSG00000108039.18	novel	2344	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_16	80.316674271847	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	1	True	NA	-5	True	AATAAA	-16	NA	109923551	109864765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109907690_109907816_109923401
transcript_13395.known	chr10	+	4413	15	FSM	ENSG00000148700.15	ENST00000356080.9	4413	15	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_5	54.9313579081443	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTGTATCATGAGGTT	2	True	NA	NA	False	AATAAA	-17	NA	110007983	110135565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304_110132401_110133325
transcript_134.known	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2297	junction_3	8536.74432874588	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_13406.nic	chr10	+	1391	2	ISM	ENSG00000148700.15	ENST00000487085.5	708	5	-272	11248	-28	947	5prime_fragment	FALSE	canonical	3	528	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCAACTCAAGTGGAAA	1836	False	NA	NA	False	NA	NA	NA	110007935	110101651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110008300_110100624
transcript_13407.known	chr10	+	3470	6	FSM	ENSG00000119950.21	ENST00000332674.9	3470	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	23.38888624967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTCTTTTTGTACCAT	-21	True	NA	14	True	AATAAA	-17	NA	110207604	110287365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110208083_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_13409.known	chr10	+	2424	6	FSM	ENSG00000119950.21	ENST00000239007.11	2424	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	26.5781865446083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATGATTTTCATAACT	7	True	NA	33	True	TTTAAA	-39	NA	110225992	110286506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110226284_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_1341.known	chr1	-	2043	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	7.92824967172092	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	31	True	NA	3	True	AATAAA	-36	NA	23868290	23845076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
transcript_13410.known	chr10	+	2255	6	FSM	ENSG00000119950.21	ENST00000650843.1	2255	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.1492585937167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAGAAAATAAAGAC	1004	False	NA	-13	True	NA	NA	NA	110227086	110286596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110227119_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_13418.known	chr10	-	1110	6	FSM	ENSG00000119953.14	ENST00000369592.1	1110	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	74.5036911837259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAGCAAGATACCATT	246	False	NA	NA	False	NA	NA	NA	110304697	110294061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304392
transcript_13419.known	chr10	-	4310	6	FSM	ENSG00000119953.14	ENST00000369603.10	4310	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	15.7098695093244	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGATTCAATAAATATCA	23	True	NA	NA	False	ATTAAA	-28	NA	110304920	110290729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304747
transcript_1342.known	chr1	+	380	3	FSM	ENSG00000189266.13	ENST00000471915.5	380	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	505.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGAGGTATAACATTC	NA	False	NA	NA	False	NA	NA	NA	23959108	23961465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23959257_23960928_23961135_23961439
transcript_13420.nic	chr10	-	2058	6	NIC	ENSG00000119953.14	novel	4310	6	NA	NA	-25	1020	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	71.8737782504858	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTGTGTTAACAAAAGG	-20	True	NA	NA	False	AATAAA	-17	NA	110304963	110293041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_110294288_110295227_110295382_110297566_110297746_110298647_110298791_110303467_110303588_110304747
transcript_13422.known	chr10	-	803	5	FSM	ENSG00000119953.14	ENST00000674928.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	82.5242388635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	5	True	NA	0	True	NA	NA	NA	110304938	110297569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110297729_110298647_110298791_110300546_110300737_110303467_110303588_110304747
transcript_13423.nic	chr10	-	658	4	ISM	ENSG00000119953.14	ENST00000369603.10	4310	6	-63	6840	-45	0	5prime_fragment	FALSE	canonical	3	169	junction_2	2.16024689946929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	NA	False	NA	0	True	NA	NA	NA	110304983	110297569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_110297729_110298647_110298791_110303467_110303588_110304747
transcript_13424.known	chr10	+	5522	29	FSM	ENSG00000108055.11	ENST00000361804.5	5522	29	0	0	0	0	multi-exon	FALSE	non_canonical	3	962	junction_19	108.884762853361	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAGCCTATATT	-18	True	NA	NA	False	AATAAA	-23	NA	110567694	110606048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604_110589709_110589891_110589992_110590411_110590573_110590990_110591133_110593072_110593224_110596397_110596551_110598138_110598291_110599653_110599813_110600438_110600547_110601021_110601131_110601636_110601885_110601965_110602179_110602473_110602666_110602824_110603003_110603183_110603291_110604230
transcript_13431.nic	chr10	+	1506	14	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	6	2521	-5	-1408	5prime_fragment	FALSE	canonical	3	1051	junction_6	89.2456884079465	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAGATGAACTACAAA	-23	True	NA	NA	False	AGTAAA	-4	NA	110567689	110589678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604
transcript_13434.nic	chr10	+	1292	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	5	7944	5	2249	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.3054953502802	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGGGATAAGTGGAT	-24	True	NA	NA	False	NA	NA	NA	110567688	110584255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_13435.nic	chr10	+	1407	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	3	7831	3	2362	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.3054953502802	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGAAAAATCTGGAGC	-26	True	NA	NA	False	NA	NA	NA	110567686	110584368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_13437.nic	chr10	+	1491	12	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-293	8263	-293	1930	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.7575209402092	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACGAGGAAT	NA	False	NA	19	True	NA	NA	NA	110567390	110583936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840
transcript_13439.nic	chr10	+	1003	11	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-15	8765	-15	1428	5prime_fragment	FALSE	canonical	3	1051	junction_6	83.9128118942513	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGAACAGCTTAG	-44	True	NA	22	True	AAAACA	-19	NA	110567668	110583434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383
transcript_13443.nic	chr10	+	757	9	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	7	10193	-4	0	5prime_fragment	FALSE	canonical	3	1051	junction_6	92.262448347093	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTATCAGAAGTGGGAT	-22	True	NA	NA	False	AAGAAA	-13	NA	110567690	110582006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922
transcript_13447.known	chr10	+	3697	13	FSM	ENSG00000150593.18	ENST00000393104.6	3697	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	63.1550121174524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAGTTGTATTTAAT	0	True	NA	NA	False	AATAAA	-19	NA	110871794	110900005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110872019_110875965_110876071_110876669_110876754_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_13449.known	chr10	+	3481	12	FSM	ENSG00000150593.18	ENST00000280154.12	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	21.5966021202525	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGTTGTATTTAATC	7	True	NA	NA	False	AATAAA	-20	NA	110871927	110900006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110872019_110875965_110876071_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_1345.known	chr1	+	814	3	FSM	ENSG00000189266.13	ENST00000374468.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	492	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGTTTAAATTTA	11	True	NA	NA	False	TATAAA	-3	NA	23959827	23961880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_23959999_23960932_23961135_23961439
transcript_13452.nic	chr10	+	1608	12	NIC	ENSG00000150593.18	novel	3481	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	47.0173170137722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATATCTGAATTGTAA	80	False	NA	-10	True	TATAAA	-1	NA	110871874	110898122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_110872019_110875965_110876071_110881274_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_13453.nic	chr10	+	2204	12	NIC	ENSG00000150593.18	novel	3481	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	47.0173170137722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACATGTGAAGCAGT	80	False	NA	-13	True	AATGAA	-27	NA	110871874	110898718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_110872019_110875965_110876071_110881274_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_13457.known	chr10	-	812	5	FSM	ENSG00000214413.9	ENST00000454061.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	52.7938206611342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTGCAAATTAAATTAT	164	False	110919224	-35	True	NA	NA	NA	110919201	110900120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110918120_110918214_110919120
transcript_13460.known	chr10	-	569	4	FSM	ENSG00000214413.9	ENST00000605742.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	54.0144013718152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAATTTGTATTGTGAA	-1	True	NA	-1	True	AATAAA	-40	NA	110918936	110900217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110918844
transcript_13461.known	chr10	-	2025	4	FSM	ENSG00000214413.9	ENST00000448814.7	2025	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	4.49691252107735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTATTTTGGTGTAC	-4	True	NA	-8	True	AATAAA	-18	NA	110919180	110898729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110919120
transcript_13468.known	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	54.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	164	False	110919224	1	True	ATTAAA	-24	NA	110919201	110899955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901613_110919120
transcript_13472.known	chr10	-	296	2	FSM	ENSG00000214413.9	ENST00000431847.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCTGTATCTGATTCT	15	True	NA	NA	False	NA	NA	NA	110919161	110917958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110918214_110919120
transcript_13473.known	chr10	-	616	5	FSM	ENSG00000214413.9	ENST00000398289.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.8925085963467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAAAATATCCAAGATT	-6	True	NA	-21	True	AATAAA	-20	NA	110919182	110900237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901025_110901123_110901537_110901613_110918120_110918214_110919120
transcript_13474.known	chr10	-	383	3	FSM	ENSG00000214413.9	ENST00000436562.1	383	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAAGATTGATGAAATT	19	True	NA	-12	True	AATAAA	-29	NA	110919157	110900228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_110900527_110901537_110901586_110919120
transcript_13476.known	chr10	+	3884	9	FSM	ENSG00000108061.13	ENST00000369452.9	3884	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	15.483862567202	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	-6	True	NA	14	True	TATAAA	-29	NA	110919603	111013665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_110964124_110965062_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_13477.nnic	chr10	+	2950	8	FSM	ENSG00000108061.13	ENST00000689997.1	3581	8	26	605	1	0	multi-exon	TRUE	canonical	3	18	junction_1	66.2364348838496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	-9	True	NA	14	True	TATAAA	-29	NA	110919600	111013665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_13478.known	chr10	+	815	7	FSM	ENSG00000108061.13	ENST00000489390.1	815	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.992036614267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCTGGCACTCTGCA	-7	True	NA	NA	False	NA	NA	NA	110919602	111011670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_13479.nic	chr10	+	387	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-53	5794	-28	-329	multi-exon	FALSE	canonical	3	218	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCCAAAGTACCATCAGC	781	False	NA	NA	False	AAAAAG	-15	NA	110919546	110964400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_110964124
transcript_13480.nic	chr10	+	468	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-53	5713	-28	-248	multi-exon	FALSE	canonical	3	218	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCTAAGACCAAAGGGAA	781	False	NA	NA	False	AAGAAA	-3	NA	110919546	110964481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_110919658_110964124
transcript_13481.known	chr10	-	6372	22	FSM	ENSG00000119927.14	ENST00000348367.9	6372	22	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	8.26872916996123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATGTGTTTGATTTG	-32	True	NA	-1	True	AATAAA	-17	NA	112183765	112149864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112153667_112154628_112154688_112155863_112156054_112157248_112157390_112158315_112158394_112159910_112160054_112160603_112160869_112161666_112161738_112163700_112163817_112164524_112164611_112166401_112166516_112168311_112168525_112168852_112168953_112172181_112172319_112172969_112173067_112173698_112173846_112175599_112175714_112177983_112178058_112180472_112180596_112181682_112181814_112182793_112182892_112183692
transcript_13483.known	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	10.259888211986	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	-26	True	NA	13	True	ATTAAA	-18	NA	112447214	112818744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
transcript_13490.nnic	chr10	-	2279	12	NNC	ENSG00000023041.12	novel	2170	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	63.6568798097067	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-1	True	NA	-13	True	AATAAA	-23	NA	112446947	112430299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112433540_112433617_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13494.known	chr10	-	2313	12	FSM	ENSG00000023041.12	ENST00000682731.1	2313	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	70.2443197903569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	5	True	NA	-18	True	AATAAA	-18	NA	112446941	112430304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112439505_112439627_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13501.known	chr10	-	2121	11	FSM	ENSG00000023041.12	ENST00000684173.1	2121	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	56.815578849467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	614	False	NA	-18	True	AATAAA	-18	NA	112446962	112430304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446704
transcript_13502.known	chr10	-	1721	11	FSM	ENSG00000023041.12	ENST00000369404.3	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	56.0378443553997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTCTGGTTAAGATGT	9	True	NA	-5	True	ACTAAA	-15	NA	112446901	112430723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443595_112445169_112445651_112446704
transcript_13504.known	chr10	-	2170	11	FSM	ENSG00000023041.12	ENST00000369405.7	2170	11	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	33.8763929602902	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-4	True	NA	-13	True	AATAAA	-23	NA	112446914	112430299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13505.known	chr10	-	2145	11	FSM	ENSG00000023041.12	ENST00000683895.1	2145	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	55.6691117227498	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-10	True	NA	-18	True	AATAAA	-18	NA	112446956	112430304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
transcript_13513.known	chr10	-	2008	10	FSM	ENSG00000023041.12	ENST00000684741.1	2008	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	64.5332721150613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	5	True	NA	-18	True	AATAAA	-18	NA	112446941	112430304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112445169_112445651_112446704
transcript_13514.known	chr10	-	2038	10	FSM	ENSG00000023041.12	ENST00000682195.1	2038	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	58.4446556819165	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-3	True	NA	-18	True	AATAAA	-18	NA	112446949	112430304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13516.known	chr10	-	3216	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	31.9652589192983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-4	True	NA	-18	True	AATAAA	-18	NA	112446950	112430304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_13524.nic	chr10	-	870	2	ISM	ENSG00000023041.12	ENST00000684617.1	3472	9	-15	13661	0	-13561	5prime_fragment	FALSE	canonical	3	202	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGGCTCGGAGACTT	-10	True	NA	94	True	NA	NA	NA	112446956	112445032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_112445651_112446704
transcript_13526.nic	chr10	-	736	2	ISM	ENSG00000023041.12	ENST00000684617.1	3472	9	26	13754	-1	-13654	5prime_fragment	FALSE	canonical	3	202	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTTTGCCTTATC	-5	True	NA	1	True	AAGAAA	-37	NA	112446915	112445125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_112445651_112446704
transcript_13532.known	chr10	+	4073	15	FSM	ENSG00000148737.17	ENST00000355995.8	4073	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	85.9903886418448	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
transcript_13535.known	chr10	+	4037	14	FSM	ENSG00000148737.17	ENST00000543371.5	4037	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	98.6033233953876	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113160618_113160692_113165554
transcript_13536.known	chr10	+	4000	14	FSM	ENSG00000148737.17	ENST00000538897.5	4000	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	83.7005793423709	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113165554
transcript_13537.known	chr10	+	3802	14	FSM	ENSG00000148737.17	ENST00000369397.8	3802	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	77.6142791718183	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	96	False	NA	19	True	AATAAA	-25	NA	112950451	113167678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
transcript_13540.known	chr10	+	1979	13	FSM	ENSG00000148737.17	ENST00000355717.9	1979	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	87.195302816914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	94	False	NA	NA	False	NA	NA	NA	112950585	113165972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113089399_113089541_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_13545.nic	chr10	+	2604	13	NIC	ENSG00000148737.17	novel	4000	14	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	72.0016878660185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTTTGAAGCAGCCCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	112950222	113166324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113165554
transcript_13547.known	chr10	+	3953	13	FSM	ENSG00000148737.17	ENST00000536810.5	3953	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	68.2511701161396	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
transcript_13551.nic	chr10	+	2538	12	NIC	ENSG00000148737.17	novel	3953	13	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_11	46.4284751611026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGCAAT	NA	False	NA	NA	False	ATTAAA	-5	NA	112950222	113166309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_13560.nnic	chr10	+	1463	9	ISM	ENSG00000148737.17	ENST00000352065.10	1553	15	-413	13867	0	-13	5prime_fragment	FALSE	canonical	3	145	junction_3	33.0186973546807	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAAAAGAAGAAGC	-10	True	NA	NA	False	NA	NA	NA	112950246	113151745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724
transcript_13562.known	chr10	+	2985	13	FSM	ENSG00000148702.15	ENST00000351270.4	2985	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGAGTTTGTCTTTCCCC	3	True	NA	NA	False	AATAAA	-14	NA	113553052	113589602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_113553191_113567488_113567526_113574288_113574406_113575896_113576005_113577149_113577267_113578025_113578146_113578626_113578799_113580594_113580693_113581875_113582132_113583215_113583359_113584147_113584283_113585792_113585939_113588204
transcript_13564.known	chr10	+	2421	8	FSM	ENSG00000165806.21	ENST00000369315.5	2421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.9473029261397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTCCAGTTTGCTTTC	27	False	NA	13	True	ATTAAA	-21	NA	113679939	113730903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_113679979_113691963_113692071_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_13566.known	chr10	+	2344	7	FSM	ENSG00000165806.21	ENST00000369318.8	2344	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.3879226322456	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCAGTTTGCTTTCCT	-1	True	NA	15	True	ATTAAA	-23	NA	113679911	113730905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_113679979_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_13567.known	chr10	-	4241	10	FSM	ENSG00000198924.8	ENST00000369305.1	4241	10	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_9	13.4412301024373	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGGTGTCTTTTGT	9	True	NA	NA	False	AATAAA	-13	NA	113854383	113834728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722_113853848_113854353
transcript_13569.known	chr10	-	7343	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	14.2647949512077	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTACTTATTAAATA	-22	True	NA	-44	True	TATAAA	-29	NA	114174232	114120900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
transcript_13570.nic	chr10	-	2668	14	ISM	ENSG00000165813.20	ENST00000369287.8	7228	16	-29	6603	0	-2536	5prime_fragment	FALSE	canonical	3	36	junction_4	11.0843991864893	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTATGTATTATTACGG	-22	True	NA	NA	False	AAGAAA	-13	NA	114174232	114127464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_13578.nic	chr10	-	1259	5	ISM	ENSG00000165813.20	ENST00000369287.8	7228	16	-29	24808	0	-14644	5prime_fragment	FALSE	canonical	3	39	junction_4	7.66077672302228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGAGACACTTGAGA	-22	True	NA	NA	False	AATGAA	-40	NA	114174232	114145669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_13582.known	chr10	-	1928	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-10	True	NA	-5	True	AATAAA	-22	NA	114174220	114161607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114163330_114174014
transcript_13583.known	chr10	-	7228	16	FSM	ENSG00000165813.20	ENST00000369287.8	7228	16	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_6	10.715720538847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAGTTTGATGGCATCT	7	True	NA	-5	True	ATTAAA	-22	NA	114174203	114120861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_13584.known	chr10	-	2035	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	8	True	NA	-5	True	AATAAA	-22	NA	114174202	114161607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114163330_114173140_114173266_114174014
transcript_13590.nic	chr10	-	2538	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-12	76	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	72.2302903479558	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAGCAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	114526943	114435364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526638
transcript_13591.nic	chr10	-	2537	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-32	76	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	64.2299336368955	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAGCAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	114526963	114435364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_13592.nic	chr10	-	2442	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-12	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	72.2302903479558	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGGAAAAACACAAA	NA	False	NA	NA	False	NA	NA	NA	114526943	114435460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526638
transcript_13593.nic	chr10	-	2441	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-32	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	64.2299336368955	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGGAAAAACACAAA	NA	False	NA	NA	False	NA	NA	NA	114526963	114435460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_13595.known	chr10	-	2255	16	FSM	ENSG00000099204.21	ENST00000369253.6	2255	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.4593550573436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	-14	True	NA	NA	False	AAGAAA	-14	NA	114526835	114435440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114487957_114488017_114491790_114491879_114526659
transcript_13600.known	chr10	+	3406	8	FSM	ENSG00000165832.6	ENST00000298746.5	3406	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	27.2801041352971	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCATGAGTTATTT	-26	True	NA	8	True	AATAAA	-20	NA	114938194	114977676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725_114959808_114970367_114970441_114972134_114972275_114974328_114974386_114975122
transcript_13604.known	chr10	+	584	4	FSM	ENSG00000165832.6	ENST00000485065.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	11.6714276000077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGCCTCTTTTTCTATA	165	False	NA	-6	True	AATAAA	-10	NA	114938385	114960000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725
transcript_13606.known	chr10	-	1755	10	FSM	ENSG00000151892.16	ENST00000684105.1	1755	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	3.94405318873308	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTATCTGTTTCCTGT	2	True	NA	NA	False	ATTAAA	-34	NA	116272643	116064354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116272560
transcript_13609.nnic	chr10	+	1425	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	12.3209397188508	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	-4	True	NA	8	True	ATTAAA	-21	NA	116325460	116380029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_116325603_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_13611.nnic	chr10	+	1305	6	NNC	ENSG00000182645.6	novel	1679	9	NA	NA	456	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11.8894911581615	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	-1	True	NA	8	True	ATTAAA	-21	NA	116325463	116380029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_116325603_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_13618.nic	chr10	-	2643	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-48	1485	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	2926	False	NA	-31	True	AATAAA	-20	NA	116670312	116662210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_13619.nic	chr10	-	1158	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	2926	False	NA	-16	True	AATAAA	-18	NA	116670312	116663695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_13620.nic	chr10	-	1068	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	2926	False	NA	-1	True	AATAAA	-31	NA	116670312	116663785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_13623.known	chr10	-	1791	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTTTTAGAATATA	5	True	NA	-1	True	AATAAA	-23	NA	116670264	116664285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116665827_116668257_116668324_116670080
transcript_13624.nic	chr10	+	660	2	ISM	ENSG00000232767.2	ENST00000433600.2	827	3	307	0	307	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTGTAGAATATGG	308	False	NA	18	True	CATAAA	-29	NA	116670371	116672750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_116670486_116672204
transcript_13626.known	chr10	-	6871	17	FSM	ENSG00000187164.20	ENST00000355371.9	6871	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	10.7993055332276	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCAGTTTTTATATAC	-1	True	NA	NA	False	AATAAA	-19	NA	117005187	116881476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_116886567_116901764_116901958_116906626_116906748_116911789_116911844_116915374_116915485_116921433_116921517_116927791_116927892_116929848_116930003_116940465_116940613_116944923_116945019_116948915_116948998_116951908_116952007_116954041_116954211_116960135_116960231_116968651_116968713_116979255_116979309_117005021
transcript_13629.known	chr10	-	1553	1	FSM	ENSG00000277879.1	ENST00000614747.1	1553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGGTGATTCTTGC	NA	False	NA	NA	False	AATAAA	-42	NA	117268668	117267115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_117267100_117268700
transcript_13630.known	chr10	+	3931	4	FSM	ENSG00000177640.16	ENST00000454857.6	3931	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	6.23609564462324	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGACTGTTAGTTCATT	-6	True	NA	12	True	AATAAA	-30	NA	118046981	118210158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118206521
transcript_13635.known	chr10	-	13898	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	63.7058670767458	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAATTATTACTTTATTG	-13	True	NA	NA	False	AATAAA	-21	NA	118342324	118297924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
transcript_13639.known	chr10	-	872	8	FSM	ENSG00000165669.14	ENST00000369172.8	872	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	82.0592120710057	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATTTGGGATTTTGA	-9	True	NA	-27	True	ACTAAA	-12	NA	118342320	118310745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_13647.known	chr10	-	622	1	FSM	ENSG00000213574.2	ENST00000394996.2	622	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTCTTCTGATGTCA	NA	False	NA	NA	False	NA	NA	NA	118933295	118932673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_118932700_118933300
transcript_13648.known	chr10	-	4495	23	FSM	ENSG00000107581.13	ENST00000541549.2	4495	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	209.513431787018	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAGAAAAACTAAAA	-12	True	NA	NA	False	NA	NA	NA	119080823	119035792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119035984_119036030_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13649.known	chr10	-	6659	22	FSM	ENSG00000107581.13	ENST00000369144.8	6659	22	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_17	138.080229069422	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTCATCAAAGCTAA	-6	True	NA	-3	True	AATAAA	-18	NA	119080817	119033669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13652.nic	chr10	-	2707	17	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-4	14110	-4	6973	5prime_fragment	FALSE	canonical	3	608	junction_12	57.5290347889655	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTGGAAAGGAAAAAACG	444	False	NA	-40	True	AAGAAA	-7	NA	119080827	119049902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13653.nic	chr10	-	2640	16	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-63	14771	-63	6312	5prime_fragment	FALSE	canonical	3	608	junction_11	39.5386730514147	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGCAGAGAAG	385	False	NA	12	True	NA	NA	NA	119080886	119050563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13654.nic	chr10	-	2394	14	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-63	20959	-63	124	5prime_fragment	FALSE	canonical	3	608	junction_9	36.3539470684494	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAGAAAGAGTAAGTTT	385	False	NA	NA	False	ATTAAA	-25	NA	119080886	119056751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13656.nic	chr10	-	2192	13	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-12	21192	-12	-109	5prime_fragment	FALSE	canonical	3	608	junction_8	37.4465359620293	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAAAGAACTTC	436	False	NA	NA	False	NA	NA	NA	119080835	119056984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13659.nic	chr10	-	2101	12	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-63	22249	-63	-1166	5prime_fragment	FALSE	canonical	3	608	junction_7	36.9645798743778	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGAAAACTGTCCGA	385	False	NA	85	True	NA	NA	NA	119080886	119058041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_13684.nic	chr10	+	1709	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-16	9	intron_retention	TRUE	canonical	3	200	junction_1	88.9550448260243	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGGTTTTTCCCGGCC	NA	False	NA	NA	False	NA	NA	NA	119104069	119137189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13685.nic	chr10	+	2125	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-16	-221	intron_retention	FALSE	canonical	3	200	junction_1	88.9550448260243	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTACTTGTTAGTGTAT	NA	False	NA	5	True	NA	NA	NA	119104069	119137605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13686.nic	chr10	+	2231	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-16	-115	intron_retention	FALSE	canonical	3	200	junction_1	88.9550448260243	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGGTCTTTCATCTTT	NA	False	NA	3	True	AAAACA	-1	NA	119104069	119137711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13687.nic	chr10	+	2292	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-16	-54	intron_retention	FALSE	canonical	3	200	junction_1	88.9550448260243	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTTTTTGAGTGAGG	NA	False	NA	11	True	AATAAA	-13	NA	119104069	119137772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13688.nic	chr10	+	2504	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-16	0	intron_retention	FALSE	canonical	3	200	junction_1	88.9550448260243	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	NA	False	NA	10	True	AATAAA	-23	NA	119104069	119137984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_13698.known	chr10	+	2441	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	79.3579706141733	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	15	True	NA	10	True	AATAAA	-23	NA	119104112	119137984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_137.known	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	FALSE	canonical	3	9392	junction_3	6562.61896762914	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
transcript_1373.known	chr1	-	1808	6	FSM	ENSG00000188529.15	ENST00000453840.7	1808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	602.195449999417	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTT	65	False	NA	-2	True	AATAAA	-23	NA	23980296	23966444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_13735.known	chr10	+	992	2	FSM	ENSG00000119979.18	ENST00000472379.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTTGAACTCAGCAG	-12	True	NA	NA	False	AATAAA	-15	NA	119104085	119105643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119104198_119104763
transcript_13737.nnic	chr10	-	1340	15	NNC	ENSG00000183605.17	novel	1029	15	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.5801897597785	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTCCACCGTGCCCA	NA	False	NA	-16	True	AATAAA	-32	NA	119165720	119140912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_119141073_119141148_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_13738.nnic	chr10	-	1561	15	NNC	ENSG00000183605.17	novel	1029	15	NA	NA	117	-16	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	70.9450779239311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATTTGAAGAAAGAACACA	-22	True	NA	-32	True	AATAAA	-16	NA	119165425	119140928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_119141320_119142252_119142374_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165201
transcript_13740.nic	chr10	-	1456	14	NIC	ENSG00000183605.17	novel	1556	14	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	51.141525410392	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTCCACCGTGCCCA	-22	True	NA	-16	True	AATAAA	-32	NA	119165425	119140912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165201
transcript_13741.known	chr10	-	1556	14	FSM	ENSG00000183605.17	ENST00000355697.7	1556	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_11	26.8638909887093	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACCTTTGCCGCCCTC	-32	True	NA	NA	False	NA	NA	NA	119165714	119140766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_13742.nic	chr10	-	1541	13	NIC	ENSG00000183605.17	novel	1556	14	NA	NA	117	0	intron_retention	FALSE	canonical	3	16	junction_12	52.6568424381443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTCCACCGTGCCCA	-22	True	NA	-16	True	AATAAA	-32	NA	119165425	119140912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119161082_119162339_119162415_119164130_119164197_119165201
transcript_13747.nic	chr10	-	1298	13	NIC	ENSG00000183605.17	novel	1556	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	55.4909276869251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTCCACCGTGCCCA	NA	False	NA	-16	True	AATAAA	-32	NA	119165720	119140912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_119141320_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_13756.known	chr10	-	1553	7	FSM	ENSG00000165672.7	ENST00000298510.4	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	4416	junction_4	207.105783491325	4205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTACCACCAGTA	-1	True	NA	-18	True	AATAAA	-15	NA	119178812	119167719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119168534_119169176_119169343_119172381_119172486_119173736_119173873_119174450_119174593_119177020_119177154_119178754
transcript_1376.known	chr1	-	866	6	FSM	ENSG00000188529.15	ENST00000374453.7	866	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	676.783392231222	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAAGGTGCTGCAGT	67	False	NA	-82	True	AAAAAG	-34	NA	23980294	23967617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23967957_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_13771.known	chr10	-	923	5	FSM	ENSG00000148908.15	ENST00000369103.3	923	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	4.32290411644765	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCACACTACCTTTTAC	-11	True	NA	-25	True	ATTAAA	-26	NA	119542719	119499816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305_119527425_119542589
transcript_1378.known	chr1	-	2917	6	FSM	ENSG00000188529.15	ENST00000343255.9	2917	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	601.265864655561	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGATTAACTGGAAT	1	True	NA	NA	False	AATAAA	-14	NA	23980327	23969082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_13783.known	chr10	-	2321	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	69.6696071947206	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-4	True	NA	-28	True	AATAAA	-15	NA	119597029	119575411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_13785.nic	chr10	-	2017	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	74.7789334564815	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-14	True	NA	-28	True	AATAAA	-15	NA	119597039	119575411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
transcript_13786.nic	chr10	-	2068	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	78.9603891552945	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-14	True	NA	-28	True	AATAAA	-15	NA	119597039	119575411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119593451_119593514_119596433
transcript_13793.known	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	41.8872946673028	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-2	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_13794.known	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	52.134917155174	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	864	False	NA	-4	True	AATAAA	-19	NA	119596495	119571801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
transcript_13802.known	chr10	-	2222	11	FSM	ENSG00000151923.18	ENST00000489822.5	2222	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	43.8703772493467	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-2	True	NA	-15	True	AATAAA	-28	NA	119596964	119575398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_13811.known	chr10	+	3693	6	FSM	ENSG00000198825.15	ENST00000650409.1	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	30.2086080447279	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	9	True	NA	17	True	AATAAA	-23	NA	119818726	119829147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_13814.known	chr10	+	7148	19	FSM	ENSG00000107651.14	ENST00000369075.8	7148	19	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_8	33.9081912242273	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTAGTGGTGCTTTT	-4	True	NA	NA	False	ATTAAA	-16	NA	119892729	119944657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
transcript_13823.nic	chr10	+	2823	16	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-40	12367	-40	-1480	5prime_fragment	FALSE	canonical	3	270	junction_8	34.9013848817875	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAAGCAAGT	4	True	NA	NA	False	NA	NA	NA	119892689	119932290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132
transcript_13825.nic	chr10	+	1652	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-113	39995	-113	0	5prime_fragment	FALSE	canonical	3	358	junction_1	6.64997911442	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	-2	True	NA	12	True	AATAAA	-19	NA	119892616	119904662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
transcript_13826.nic	chr10	+	2178	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-40	39396	-40	599	5prime_fragment	FALSE	canonical	3	358	junction_1	6.64997911442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTAATTTTTGGTACCT	4	True	NA	5	True	AATAAA	-13	NA	119892689	119905261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
transcript_13827.nic	chr10	+	1726	4	NIC	ENSG00000107651.14	novel	7148	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	152.59168464311	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	-8	True	NA	12	True	AATAAA	-19	NA	119892725	119904662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_119892946_119898243_119898960_119902798_119903010_119904083
transcript_13829.known	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	42	False	NA	NA	False	NA	NA	NA	120355183	120354700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_120354700_120355200
transcript_13830.nnic	chr10	+	1036	5	NIC	ENSG00000203805.11	novel	3458	7	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	9.57535900110278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGGCCACCCAGCG	9	True	NA	18	True	AATAAA	-19	NA	120457245	120589851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_120457362_120503817_120503927_120513910_120514002_120575130_120575302_120589302
transcript_13832.known	chr10	+	4545	29	FSM	ENSG00000120008.16	ENST00000263461.11	4545	29	0	0	0	0	multi-exon	FALSE	canonical	1	77	junction_28	33.6030815824492	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	-15	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
transcript_13833.nic	chr10	+	4566	29	NIC	ENSG00000120008.16	novel	4545	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	14	junction_1	47.632883406662	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	-15	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_120851528_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
transcript_13835.nic	chr10	+	2763	20	ISM	ENSG00000120008.16	ENST00000263461.11	4545	29	-80	9387	-23	-3038	5prime_fragment	FALSE	canonical	3	150	junction_4	23.7934323674142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTTCACTTTTCTT	103	False	NA	NA	False	NA	NA	NA	120851281	120900137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028
transcript_13837.nic	chr10	+	2857	12	ISM	ENSG00000120008.16	ENST00000263461.11	4545	29	-80	30010	-23	-1361	5prime_fragment	TRUE	canonical	3	150	junction_4	16.2338285713089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTTTTATTTGTTTT	103	False	NA	NA	False	GATAAA	-43	NA	120851281	120879514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352
transcript_13840.known	chr10	+	2229	1	FSM	ENSG00000120008.16	ENST00000604714.1	2229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTTGTGTTCTCTGCA	NA	False	NA	14	True	AATAAA	-16	NA	120907294	120909523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_120907300_120909500
transcript_13841.known	chr10	-	4895	12	FSM	ENSG00000107669.19	ENST00000369043.8	4895	12	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	47.0654546859306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGGTGGTCATTA	-17	True	NA	-5	True	AATAAA	-17	NA	121928031	121740423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_13842.known	chr10	-	4835	12	FSM	ENSG00000107669.19	ENST00000540606.7	5138	12	293	10	-5	-9	multi-exon	FALSE	canonical	3	21	junction_11	66.1119761346592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	NA	False	NA	-23	True	GATAAA	-19	NA	121928492	121740441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121928346
transcript_13844.known	chr10	-	4550	11	FSM	ENSG00000107669.19	ENST00000369040.9	4801	11	96	155	-15	-41	multi-exon	FALSE	canonical	1	6	junction_5	71.5766023222673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGAAGTTATTCAAGT	476	False	NA	NA	False	AATGAA	-24	NA	121927979	121740587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_13848.nnic	chr10	-	1159	8	NNC	ENSG00000107669.19	novel	2161	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	78.8423899243268	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGAAGCCCCTGCTT	9	True	NA	-8	True	AATAAA	-27	NA	121928005	121888995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_121889157_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_13850.nic	chr10	-	1548	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	214.101284442667	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-23	True	NA	36	True	ATTAAA	-26	NA	121974806	121957090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974305
transcript_13851.nic	chr10	-	1464	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_10	210.257580124951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-23	True	NA	36	True	ATTAAA	-26	NA	121974806	121957090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974389
transcript_13852.known	chr10	-	1391	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_10	46.5232200089375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-22	True	NA	36	True	ATTAAA	-26	NA	121975217	121957090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
transcript_13858.nnic	chr10	+	3781	13	NIC	ENSG00000107679.15	novel	3741	12	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	124	junction_12	57.9215825251885	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCATTTTGTTTGGTT	21	True	NA	23	True	AATAAA	-24	NA	122374746	122432354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_13859.known	chr10	+	14010	12	FSM	ENSG00000107679.15	ENST00000368990.8	3741	12	-12	-10257	0	10248	multi-exon	FALSE	canonical	3	124	junction_11	57.0347146717326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCATGACTCGACTTTG	-30	True	NA	NA	False	AATAAA	-17	NA	122374695	122442602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122374807_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_13867.nic	chr10	-	1809	9	ISM	ENSG00000286088.1	ENST00000650744.1	2404	11	33726	-27	9916	9	3prime_fragment	FALSE	canonical	3	22	junction_5	39.0862427843864	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-1	True	NA	-11	True	AATAAA	-36	NA	122845857	122832157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122841177_122841329_122845761
transcript_1387.known	chr1	-	1089	5	FSM	ENSG00000188529.15	ENST00000484146.6	1089	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	747.745737199484	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATGCAGTTTACATC	5	True	NA	NA	False	NA	NA	NA	23980356	23967172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23967724_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_13870.known	chr10	-	1958	9	FSM	ENSG00000138161.14	ENST00000392790.6	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	24.0022785376722	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-1	True	NA	-11	True	AATAAA	-36	NA	122845857	122832157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122841177_122841329_122845761
transcript_13871.known	chr10	-	1976	8	FSM	ENSG00000138161.14	ENST00000368900.5	1976	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	43.8648201749374	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	9716	False	NA	-11	True	AATAAA	-36	NA	122846175	122832157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122845761
transcript_13873.known	chr10	-	2125	8	FSM	ENSG00000138161.14	ENST00000368901.5	2125	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	28.7686053374373	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	9716	False	NA	-11	True	AATAAA	-36	NA	122846175	122832157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122845761
transcript_13879.known	chr10	-	2991	6	FSM	ENSG00000119965.13	ENST00000368891.9	2991	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	47.7912125813941	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTCACGTATTG	20	False	NA	-4	True	AATAAA	-21	NA	122954311	122930902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122932662_122937704_122938160_122948648_122948856_122951953_122952027_122952828_122953029_122954014
transcript_13881.nnic	chr10	-	1972	5	NIC	ENSG00000119965.13	novel	2913	6	NA	NA	-32	-600	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	53.9884246852971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAGTTAGTAGAACT	NA	False	NA	-7	True	AATAAA	-23	NA	122954343	122931502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_122932662_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_13883.nic	chr10	-	2077	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	1	5878	1	-4176	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGGGAATTACACAG	-19	True	NA	NA	False	AATAAA	-18	NA	122954226	122936778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_13884.nic	chr10	-	1591	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	6	6359	6	-4657	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGTAGTTTACAAGCT	-14	True	NA	-23	True	ATTAAA	-21	NA	122954221	122937259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_13885.nic	chr10	-	1172	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	-116	6900	-32	-5198	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATGTAGTCAAGTTA	NA	False	NA	NA	False	AATATA	-30	NA	122954343	122937800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_13886.known	chr10	+	1705	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	33.1934565171444	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122980039	122990390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_13887.nic	chr10	+	935	6	NIC	ENSG00000179988.15	novel	818	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	41.3424721079908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122954390	122990390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_13888.known	chr10	+	1173	6	FSM	ENSG00000179988.15	ENST00000406217.8	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	22.1846793981793	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	-18	True	NA	13	True	ATTAAA	-17	NA	122980400	122990390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_13892.nic	chr10	+	764	5	NIC	ENSG00000179988.15	novel	818	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	37.4265948223987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122954390	122990390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_13893.known	chr10	+	818	5	FSM	ENSG00000179988.15	ENST00000465232.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.6831198370289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122954380	122990390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_122954569_122983271_122983515_122986299_122986376_122986868_122986963_122990173
transcript_13896.known	chr10	-	4532	5	FSM	ENSG00000095574.12	ENST00000368886.10	4532	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	16.2230545829076	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTTTCTTTTTTGG	6	True	NA	-1	True	AATAAA	-21	NA	123008795	122990806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008693
transcript_13899.nic	chr10	-	2745	4	NIC	ENSG00000095574.12	novel	4532	5	NA	NA	-3	-1638	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	39.4658783705058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTCTTTTCTGTGTA	3	True	NA	-5	True	AATAAA	-16	NA	123008798	122992445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_122994724_122995993_122996177_122998492_122998672_123008693
transcript_13902.known	chr10	+	5848	11	FSM	ENSG00000196177.13	ENST00000358776.7	5848	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	14.208800090085	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGGTACTCTTATAA	9	True	NA	10	True	AATAAA	-18	NA	123009005	123058290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_123009072_123034355_123034516_123037746_123037848_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_13907.nic	chr10	+	2594	10	NIC	ENSG00000196177.13	novel	5848	11	NA	NA	0	1018	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	47.6165237426393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTGTTTTCACGCTGC	9	True	NA	14	True	AATAAA	-18	NA	123009005	123055137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_123009072_123034355_123034516_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_13911.known	chr10	+	7703	8	FSM	ENSG00000154473.18	ENST00000368865.9	7703	8	0	0	0	0	multi-exon	TRUE	canonical	3	1279	junction_7	403.138908556141	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGCCTCATTTGTACC	14	True	NA	6	True	AATAAA	-13	NA	123154401	123170467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123163819
transcript_13915.known	chr10	+	1361	8	FSM	ENSG00000154473.18	ENST00000368858.9	1361	8	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_7	515.023835390565	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATGTTTTTGAATGT	-8	True	NA	30	True	AATAAA	-21	NA	123154414	123165365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123165046
transcript_13930.known	chr10	-	1864	9	FSM	ENSG00000065154.12	ENST00000539214.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	241.381829266414	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	1398	False	NA	-1	True	AATAAA	-19	NA	124418976	124397302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124418872
transcript_13931.known	chr10	-	2039	10	FSM	ENSG00000065154.12	ENST00000368845.6	2039	10	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_4	37.9320379912923	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-1	True	NA	-1	True	AATAAA	-19	NA	124418923	124397302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124411972_124412201_124418872
transcript_13933.known	chr10	+	1634	7	FSM	ENSG00000107902.14	ENST00000368842.10	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	63.0740305778324	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	-12	True	NA	9	True	AGTAAA	-18	NA	124461822	124614141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179_124517272_124613263
transcript_1394.known	chr1	-	1390	5	FSM	ENSG00000188529.15	ENST00000495785.1	1390	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	699.780144045257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCATCTCACACCAAA	90	False	NA	-78	True	AAGAAA	-26	NA	23980271	23971338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23972013_23974973_23975081_23977910_23978274_23978652_23978818_23980190
transcript_13940.known	chr10	-	3599	7	FSM	ENSG00000203791.15	ENST00000368836.7	3599	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	129.218161778186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATTGTCCTTGAATG	-31	True	NA	NA	False	ACTAAA	-16	NA	124791887	124757833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791723
transcript_13952.known	chr10	-	1013	6	FSM	ENSG00000203791.15	ENST00000464099.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	138.330618447255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	-12	True	NA	-21	True	ATTAAA	-15	NA	124791868	124760145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124760504_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
transcript_13957.nnic	chr10	-	1230	6	NNC	ENSG00000203791.15	novel	4920	6	NA	NA	364	192	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	157.128482459419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGGATGGCGGTT	720	False	NA	-46	True	AATATA	-14	NA	124791504	124759953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_124760504_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791330
transcript_13962.nnic	chr10	-	1038	6	NNC	ENSG00000203791.15	novel	4920	6	NA	NA	364	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	157.128482459419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	720	False	NA	-21	True	ATTAAA	-15	NA	124791504	124760145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_124760504_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791330
transcript_13966.known	chr10	+	2955	9	FSM	ENSG00000165660.8	ENST00000298492.6	2955	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	12.854352375752	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTGTTTTAATGTCT	5	True	NA	15	True	AATAAA	-18	NA	124801818	124836667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348_124831464_124834501
transcript_13973.nic	chr10	+	2028	3	ISM	ENSG00000165660.8	ENST00000298492.6	2955	9	-16	18254	-16	-18254	5prime_fragment	FALSE	canonical	3	111	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTAGACTCAGTTATT	-11	True	NA	NA	False	NA	NA	NA	124801802	124818413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr10_+_124801902_124806830_124806922_124816575
transcript_13983.known	chr10	-	6939	11	FSM	ENSG00000175029.17	ENST00000337195.9	6939	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_10	197.400709218584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTTTCTGAAAGAGC	547	False	NA	-1	True	AATAAA	-22	NA	125160513	124984316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318
transcript_13984.known	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	225.446246364849	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	6	True	NA	-40	True	AATAAA	-18	NA	125161026	124989224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
transcript_13987.nnic	chr10	-	2408	11	NNC	ENSG00000175029.17	novel	6939	11	NA	NA	6870	253	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	238.312735706676	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTTTCACAAGCTGT	9214	False	NA	22	True	AGTAAA	-33	NA	125151846	124988881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125151617
transcript_13989.known	chr10	-	1918	11	FSM	ENSG00000175029.17	ENST00000531469.5	1918	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	240.460412542273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	0	True	NA	-40	True	AATAAA	-18	NA	125158716	124989224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125158634
transcript_1399.known	chr1	-	790	3	FSM	ENSG00000188529.15	ENST00000485292.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	718.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGTGATTGTGGTCT	-3	True	NA	NA	False	NA	NA	NA	23980331	23977789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_23978274_23978652_23978818_23980190
transcript_14.known	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00042_+_0_1000
transcript_14007.nic	chr10	-	2158	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	98	253	combination_of_known_junctions	FALSE	canonical	3	172	junction_9	189.323943429128	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTTTCACAAGCTGT	659	False	NA	22	True	AGTAAA	-33	NA	125160401	124988881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318
transcript_14008.nnic	chr10	-	2335	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	-25	253	combination_of_known_splicesites	FALSE	canonical	3	69	junction_9	217.90200538457	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTTTCACAAGCTGT	NA	False	NA	22	True	AGTAAA	-33	NA	125161086	124988881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
transcript_14021.known	chr10	+	5695	9	FSM	ENSG00000019995.6	ENST00000359653.4	5695	9	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_3	14.5639752471638	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGTCAGCGGTCTTGA	144	False	NA	10	True	ATTAAA	-21	NA	124942122	124988189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_124943308_124966593_124966782_124971964_124972119_124973644_124973717_124974199_124974399_124981708_124981830_124983174_124983305_124983458_124983689_124984773
transcript_14022.known	chr10	+	4483	25	FSM	ENSG00000107938.18	ENST00000356792.9	4483	25	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	20.3463073362766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	-8	True	NA	15	True	AATAAA	-19	NA	125719708	125764139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729002_125729105_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_14024.known	chr10	+	4387	24	FSM	ENSG00000107938.18	ENST00000337623.7	4387	24	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	27.4027581297776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	-14	True	NA	15	True	AATAAA	-19	NA	125719702	125764139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_14025.known	chr10	+	4243	26	FSM	ENSG00000107938.18	ENST00000419769.6	4243	26	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_17	42.299049634714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTATATCAGTGGAAACA	105	False	NA	NA	False	ATTAAA	-25	NA	125719514	125763579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729002_125729105_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125742219_125742346_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_14027.known	chr10	-	718	3	FSM	ENSG00000224023.10	ENST00000528844.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	NA	False	NA	-10	True	NA	NA	NA	125719546	125707236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_125707760_125709497_125709568_125719421
transcript_14029.known	chr10	+	1380	4	FSM	ENSG00000107938.18	ENST00000368812.1	1380	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	26.3354429534716	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTTCCAATTTCC	8814	False	NA	19	True	AATAAA	-23	NA	125749296	125764143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125749566_125752798_125752915_125753693_125753846_125763300
transcript_14030.known	chr10	-	764	5	FSM	ENSG00000224023.10	ENST00000527483.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.24264068711928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGTGTTCTAATAGTT	29	True	NA	NA	False	AATAAA	-16	NA	125719460	125700435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_125700583_125707051_125707201_125707400_125707760_125709497_125709568_125719421
transcript_14031.nnic	chr10	-	1185	10	NNC	ENSG00000188690.15	novel	1336	10	NA	NA	-24	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	151.247977233694	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGTATGGTTGCTGT	1	True	NA	-10	True	AATAAA	-22	NA	125823282	125788582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_125789006_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823206
transcript_14033.known	chr10	+	1433	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_7	457.269446758446	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	-4	True	NA	7	True	ATTAAA	-18	NA	125823545	125853695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
transcript_14037.known	chr10	+	1234	7	FSM	ENSG00000107949.17	ENST00000278100.11	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_6	309.363324695521	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGTTATTTTCT	-4	True	NA	NA	False	AATAAA	-27	NA	125823545	125836551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125836103
transcript_14038.known	chr10	+	2337	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_6	358.570619109945	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	-4	True	NA	15	True	AATAAA	-20	NA	125823545	125842805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
transcript_1404.known	chr1	-	674	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	4.32049379893857	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	22	True	NA	-11	True	AATAAA	-15	NA	24187248	24161377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
transcript_14057.known	chr10	-	3050	11	FSM	ENSG00000089876.12	ENST00000284690.4	3050	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	17.8706463229509	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTGAGTTTTCTGGT	-2	True	NA	NA	False	AATAAA	-20	NA	125881292	125836336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960_125854204_125859602_125859976_125866989_125867184_125880542
transcript_14061.known	chr10	+	1271	11	FSM	ENSG00000203780.12	ENST00000368693.6	1271	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	6.87386354243376	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	-14	True	NA	14	True	AATACA	-14	NA	125896563	126009592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_14068.nnic	chr10	+	1121	10	NIC	ENSG00000203780.12	novel	1271	11	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.37027731190089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	1	True	NA	14	True	AATACA	-14	NA	125896535	126009592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_125896656_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_14070.nnic	chr10	+	1016	9	NIC	ENSG00000203780.12	novel	1271	11	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.56534037568701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	1	True	NA	14	True	AATACA	-14	NA	125896535	126009592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_+_125896656_125988550_125988676_125989429_125989448_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009372
transcript_14079.known	chr10	-	2435	1	FSM	ENSG00000279725.1	ENST00000623953.1	2435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTGCCATGGATAT	NA	False	NA	NA	False	AATGAA	-43	NA	127736996	127734561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_127734600_127737000
transcript_14084.known	chr10	+	959	2	FSM	ENSG00000170430.10	ENST00000482547.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCACTCCTATGCTTGGT	16	False	NA	NA	False	AAGAAA	-8	NA	129467261	129537164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_129467297_129536240
transcript_14090.known	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.85861230093008	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-8	True	NA	-8	True	ATTAAA	-23	NA	130110830	130063895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
transcript_14091.known	chr10	+	1318	11	FSM	ENSG00000108010.12	ENST00000331244.10	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	1623	junction_4	143.855517794765	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAATCTCTTTTTCTTA	-11	True	NA	12	True	ATTAAA	-25	NA	130136390	130179672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341
transcript_14092.known	chr10	-	2861	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	-90	-1229	-46	1229	multi-exon	FALSE	canonical	3	799	junction_1	100.547302300957	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCGTATCTGAATG	-2	True	NA	-11	True	ATTAAA	-17	NA	131982013	131966454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_14095.known	chr10	+	2664	14	FSM	ENSG00000151640.13	ENST00000338492.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	5.38351637136083	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	-6	True	NA	23	True	ATTAAA	-17	NA	132186947	132205759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_14098.nic	chr10	-	1796	12	NIC	ENSG00000165752.17	novel	1866	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	11.9475437497794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	NA	False	NA	-9	True	NA	NA	NA	132249108	132207491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_132208152_132209033_132209102_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_1410.known	chr1	+	2834	16	FSM	ENSG00000158055.17	ENST00000361548.9	2834	16	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_7	1.99332218503014	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGCTGCTCTCGTT	4	True	NA	NA	False	AATAAA	-28	NA	24319356	24355318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24319569_24331425_24331613_24334644_24334707_24336481_24336828_24337077_24337152_24337635_24337790_24337991_24338104_24339667_24339763_24342114_24342274_24342693_24342773_24342891_24343026_24344896_24344932_24346552_24346642_24347467_24347554_24350057_24350123_24354373
transcript_14103.known	chr10	-	733	2	FSM	ENSG00000165752.17	ENST00000368619.3	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGAGATTAATGCTGC	10	True	NA	NA	False	NA	NA	NA	132331831	132324036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132324374_132331435
transcript_14105.known	chr10	-	607	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTTGCTTGTTATTG	4	True	NA	1	True	AATAAA	-25	NA	132331837	132330280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132330486_132331435
transcript_14106.nnic	chr10	-	613	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	-52	-10	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCGTATTCCCTCTTG	651	False	NA	-9	True	AATAAA	-15	NA	132331899	132330290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_132330486_132331481
transcript_14109.known	chr10	+	7971	11	FSM	ENSG00000148814.18	ENST00000368614.8	7971	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	7.863841300535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATCCTATTCTGTCCT	14	True	NA	NA	False	AATAAA	-17	NA	132332192	132381508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
transcript_1411.known	chr1	+	1676	12	FSM	ENSG00000001461.17	ENST00000339255.2	1676	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.1830466456585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	15	True	NA	-18	True	ATTAAA	-1	NA	24415813	24466310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
transcript_14111.nnic	chr10	+	1704	9	NNC	ENSG00000148814.18	novel	1809	9	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	8.47699091659299	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTGTGTGTGCTGT	2055	False	NA	5	True	AATAAA	-15	NA	132332127	132353396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132348962_132349058_132351606_132351754_132353037
transcript_14114.known	chr10	+	1738	8	FSM	ENSG00000148814.18	ENST00000625755.2	1738	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.1398385850373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTGTGTGTGCTGT	-24	True	NA	5	True	AATAAA	-15	NA	132332154	132353396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132352881
transcript_14115.known	chr10	-	1578	2	FSM	ENSG00000226900.2	ENST00000654872.1	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTGTGTTTTAGT	NA	False	NA	NA	False	AAGAAA	-25	NA	132518291	132510758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132512162_132518116
transcript_14116.known	chr10	-	1825	9	FSM	ENSG00000171811.14	ENST00000368585.3	1825	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	8.44744783943648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAAATTGAAGTTTATC	4448	False	NA	NA	False	TATAAA	-18	NA	132942823	132929184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132929805_132934751_132934863_132936960_132937056_132937551_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_14117.known	chr10	-	1156	6	FSM	ENSG00000171811.14	ENST00000475340.1	1156	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.88767014308903	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTCTACCGAATTG	19	True	NA	-11	True	AATAAA	-15	NA	132942543	132937114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_14119.known	chr10	-	408	1	FSM	ENSG00000273980.1	ENST00000611956.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTCTGTTTTTTGTTTT	7056	False	NA	NA	False	AGTAAA	-22	NA	133257551	133257143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133257100_133257600
transcript_14123.known	chr10	-	3896	18	FSM	ENSG00000130640.15	ENST00000682905.1	3896	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_16	55.7970246382144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	19	True	NA	-43	True	NA	NA	NA	133308846	133278674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302758_133302981_133308822
transcript_14124.known	chr10	-	3929	18	FSM	ENSG00000130640.15	ENST00000252936.8	3929	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	24.6387041855824	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTGTCAGTCTCAGT	-7	True	NA	-3	True	AGTAAA	-16	NA	133308872	133278634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_14127.known	chr10	-	4281	17	FSM	ENSG00000130640.15	ENST00000683673.1	4281	17	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	25.3561352289737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCACAAACCGCTTC	188	False	NA	-79	True	GGGGCT	-45	NA	133308977	133278710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_1413.known	chr1	+	5372	12	FSM	ENSG00000001461.17	ENST00000374399.9	5372	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.4284682257282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	3	True	NA	13	True	ATTAAA	-15	NA	24415801	24472976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
transcript_14130.known	chr10	+	1084	6	FSM	ENSG00000198546.15	ENST00000361518.10	1084	6	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_5	34.8137903710584	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	-2	True	NA	30	True	TTTAAA	-27	NA	133308913	133313161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_14131.known	chr10	+	744	5	FSM	ENSG00000165828.15	ENST00000433452.6	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGCCGGGTGCCTGTA	-12	True	NA	NA	False	AATACA	-14	NA	133347372	133352683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352141_133352246
transcript_14132.known	chr10	-	1306	2	FSM	ENSG00000130640.15	ENST00000480198.1	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGACTGGTATTAACC	17	True	NA	NA	False	NA	NA	NA	133308848	133301700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133302981_133308822
transcript_14133.nic	chr10	-	771	6	NIC	ENSG00000148803.12	novel	762	6	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	111.462280615462	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCTCTGTTCTCAC	255	False	NA	NA	False	NA	NA	NA	133357768	133355159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_14134.known	chr10	-	762	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	87.3576556461997	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCTCTGTTCTCAC	-2	True	NA	NA	False	NA	NA	NA	133358025	133355159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_14137.known	chr10	-	628	6	FSM	ENSG00000148803.12	ENST00000368551.1	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	89.318755029389	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGTGAAAATGATGGA	-31	True	NA	NA	False	NA	NA	NA	133357737	133355202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_14138.known	chr10	-	689	6	FSM	ENSG00000148803.12	ENST00000278025.9	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_5	32.8426551910773	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTCTGTTCTCACGC	4	True	NA	NA	False	NA	NA	NA	133358019	133355157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_14142.nnic	chr10	-	757	6	NNC	ENSG00000148803.12	novel	689	6	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	95.8694946268103	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATTCCAGCTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	133358060	133355163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr10_-_133355437_133355737_133355845_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_14143.known	chr10	-	590	5	FSM	ENSG00000148803.12	ENST00000447176.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	115.006521554214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATTCCAGCTCTGTTC	28	False	NA	NA	False	NA	NA	NA	133357995	133355163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357922
transcript_14153.known	chr10	-	1277	8	FSM	ENSG00000127884.5	ENST00000368547.4	1277	8	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_2	135.237055663342	1433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCTTGTAGTCATG	-5	True	NA	-31	True	ATTAAA	-20	NA	133373354	133362484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_-_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
transcript_14156.known	chr10	+	1283	11	FSM	ENSG00000148824.19	ENST00000477902.6	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	155.57008067106	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTGTAACCTTTAA	4779	False	NA	NA	False	NA	NA	NA	133394093	133420464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394185_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14160.known	chr10	+	3424	11	FSM	ENSG00000148824.19	ENST00000317502.11	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_7	73.9257059486076	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGGAGCAAAGTGGGT	9	True	NA	18	True	NA	NA	NA	133394156	133422520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14163.known	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	53.7031162164546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	-11	True	NA	NA	False	NA	NA	NA	133394195	133421307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14168.known	chr10	+	953	9	FSM	ENSG00000148824.19	ENST00000432508.3	953	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	179.288829476351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTTGAGGCTCAAGAC	26	True	NA	NA	False	NA	NA	NA	133394173	133420219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_14175.known	chr10	+	693	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_5	28.045677028733	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCGTTCTGTGAATTTC	17	True	NA	-68	True	NA	NA	NA	133394223	133399804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
transcript_14180.known	chr11	-	2819	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	2	-29	-2	multi-exon	FALSE	canonical	3	253	junction_1	24.5809320861155	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATATGGTCTCTGTCGT	1261	False	NA	-6	True	AATAAA	-33	NA	207428	202925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_205470_205610_205668_205951_206044_207302
transcript_14182.known	chr11	-	2916	3	FSM	ENSG00000177951.18	ENST00000325147.13	2916	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	-4	True	NA	-4	True	AATAAA	-35	NA	207382	202923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_205668_205951_206044_207302
transcript_14183.known	chr11	+	2702	10	FSM	ENSG00000177963.15	ENST00000325207.9	2702	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	124.152037418086	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	790	False	NA	13	True	AATAAA	-20	NA	208529	215113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212596_212760_212836_212982_213298_213419_214229
transcript_14184.known	chr11	+	3506	10	FSM	ENSG00000177963.15	ENST00000526104.6	3506	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_7	38.3679392909249	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	3	True	NA	13	True	AATAAA	-20	NA	207707	215113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
transcript_14186.nic	chr11	+	2368	10	NIC	ENSG00000177963.15	novel	3506	10	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	125.153239404073	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	-20	True	NA	13	True	AATAAA	-20	NA	208773	215113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_208939_209270_209319_209478_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
transcript_14188.nic	chr11	+	2513	10	NIC	ENSG00000177963.15	novel	3506	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	127.375598957872	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	3	True	NA	13	True	AATAAA	-20	NA	208796	215113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_208939_209174_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
transcript_14196.known	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	27.1825107171668	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	2	True	NA	NA	False	TATAAA	-17	NA	236342	215029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_14197.known	chr11	-	1588	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	61.0584874435069	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	1	True	NA	-53	True	GGGGCT	-22	NA	236343	216178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
transcript_14198.known	chr11	-	1225	7	FSM	ENSG00000142082.15	ENST00000529382.5	1225	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.2810956630511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGGTGAAACCAGAATA	46	True	NA	NA	False	NA	NA	NA	236834	216610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236615
transcript_1420.known	chr1	-	2726	9	FSM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	16.814707104199	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-27	True	NA	-1	True	ATTAAA	-22	NA	24413782	24356998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_14203.known	chr11	+	1589	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	871	junction_3	93.0164262673833	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	-12	True	NA	25	True	AATAAA	-19	NA	236975	252984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_14205.known	chr11	+	1427	12	FSM	ENSG00000185627.19	ENST00000352303.9	1427	12	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_10	295.807481507318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATAATAAACCCCTCT	1	True	NA	-6	True	NA	NA	NA	237025	252953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251819_251937_252504
transcript_14209.known	chr11	+	1632	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_9	85.8082621385591	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	12	True	NA	7	True	AATAAA	-1	NA	236999	252966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_14210.known	chr11	+	1489	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	294.458601111591	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	13	False	NA	22	True	AATAAA	-16	NA	237037	252981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_1422.known	chr1	-	2544	8	FSM	ENSG00000001460.18	ENST00000003583.12	2544	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	31.4448010043645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTTGGGTACCC	30	True	NA	-7	True	ATTAAA	-16	NA	24413725	24357004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24401318_24401457_24413673
transcript_14221.known	chr11	+	1591	11	FSM	ENSG00000185627.19	ENST00000431206.6	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	317.910506274958	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	-11	True	NA	22	True	AATAAA	-16	NA	236976	252981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_237145_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_14225.known	chr11	+	3699	14	FSM	ENSG00000142102.16	ENST00000409548.7	3699	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	84.5989494528195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTGAGACCTGTGGAC	1	True	NA	NA	False	NA	NA	NA	289125	296107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_289240_289803_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_14230.known	chr11	+	4418	11	FSM	ENSG00000142102.16	ENST00000474221.5	4418	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	89.6069193756821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGAGGAGCCGCTG	10	True	NA	20	True	ATTAAA	-24	NA	289134	295678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_289240_289803_290076_290389_290601_290677_292096_292545_292678_292885_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_14233.known	chr11	-	736	2	FSM	ENSG00000206013.2	ENST00000382614.2	736	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGGCCTCTTTCC	0	True	NA	NA	False	ATTAAA	-19	NA	299526	298199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_298714_299304
transcript_14235.known	chr11	+	588	3	FSM	ENSG00000185201.18	ENST00000533141.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	901.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTCGCCCTGCCCCCAG	NA	False	NA	NA	False	NA	NA	NA	307630	309230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_307793_308230_308439_309012
transcript_14236.known	chr11	+	844	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5933	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	13	False	NA	-6	True	NA	NA	NA	313526	315240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_313692_313996_314357_314921
transcript_14237.known	chr11	+	804	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	381.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_314357_314673_314810_314921
transcript_14238.known	chr11	+	907	2	FSM	ENSG00000185201.18	ENST00000616316.3	1006	2	99	0	99	0	multi-exon	FALSE	canonical	3	1807	junction_1	0	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	NA	False	NA	32	True	AATAAA	-18	NA	307914	309395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_308439_309012
transcript_14239.known	chr11	+	556	2	FSM	ENSG00000185201.18	ENST00000602569.2	556	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTGACTTCACCT	30	False	NA	30	True	AATAAA	-16	NA	308252	309393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_308439_309023
transcript_14241.known	chr11	+	662	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	11	True	NA	25	True	AATAAA	-16	NA	314039	315271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_314357_314926
transcript_14242.known	chr11	-	725	3	FSM	ENSG00000142089.17	ENST00000531688.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	128.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGCGACTTCACC	15	True	NA	-21	True	AATAAA	-15	NA	320841	319678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_319991_320112_320249_320564
transcript_14243.known	chr11	-	587	2	FSM	ENSG00000142089.17	ENST00000679382.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	15	True	NA	-18	True	AATAAA	-18	NA	320841	319675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_319986_320564
transcript_14244.known	chr11	-	611	2	FSM	ENSG00000142089.17	ENST00000399808.5	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	5145	junction_1	0	2734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-4	True	NA	-18	True	AATAAA	-18	NA	320860	319675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_319991_320564
transcript_14245.known	chr11	+	3750	20	FSM	ENSG00000182272.12	ENST00000329962.11	3750	20	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	45.9545722935318	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	-6	True	NA	28	True	AATGAA	-25	NA	369498	382117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_369955_372108_372213_372661_372755_372851_372948_373025_373117_373190_373292_373448_373517_373749_373829_375460_375528_375638_375774_375846_375957_376073_376175_376250_376352_376420_377328_379417_379702_379865_380020_380129_380203_380291_380446_380824_380952_381668
transcript_14248.nic	chr11	-	1846	10	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_9	64.9204641593594	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
transcript_14251.known	chr11	-	1598	10	FSM	ENSG00000185187.13	ENST00000397632.7	1598	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	62.4792311171293	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	18	True	NA	-6	True	AATAAA	-17	NA	417325	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
transcript_14252.known	chr11	-	1639	10	FSM	ENSG00000185187.13	ENST00000332725.7	1639	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	67.107063895624	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
transcript_14256.nnic	chr11	-	1448	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	73.9584976523996	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-23	True	NA	-6	True	AATAAA	-17	NA	417366	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417324
transcript_14258.nic	chr11	-	1440	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	81.8164867248649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_409867_410028_417324
transcript_14265.nnic	chr11	-	1273	8	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	70.1258344197146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-16	True	NA	-6	True	AATAAA	-17	NA	417359	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
transcript_14266.nnic	chr11	-	1280	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	74.2999986266377	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417324
transcript_1427.nic	chr1	-	710	5	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	22583	0	-309	5prime_fragment	FALSE	canonical	3	86	junction_1	10.2316909648406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGACATCGTATTTT	-27	True	NA	NA	False	AATAAA	-13	NA	24413782	24379581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_14270.nnic	chr11	-	1129	7	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	85.1027157159055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_406060_406348_406539_407061_407165_407424_407569_407816_407958_408072_408207_417324
transcript_14271.known	chr11	-	608	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	107	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	14	True	NA	-6	True	AATAAA	-17	NA	407135	405715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_406060_406348_406539_407061
transcript_14272.known	chr11	-	2867	23	FSM	ENSG00000185101.13	ENST00000332826.7	2867	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	8.81958751682538	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTTCCTGGCCTC	-15	True	NA	-18	True	AGTAAA	-13	NA	442011	417937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431768_431847_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
transcript_14274.known	chr11	-	5487	16	FSM	ENSG00000185101.13	ENST00000532094.5	5487	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	7.10555338371959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTTCCTGGCCTC	0	True	NA	-18	True	AGTAAA	-13	NA	441996	417937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_418590_418719_418814_418887_418990_419581_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_430180_430268_430404_431693_433460_433814_433938_434023_434099_441920
transcript_14279.nic	chr11	-	2017	11	NIC	ENSG00000023191.17	novel	2014	11	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_10	115.901682472689	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	355	False	NA	-4	True	ATTAAA	-15	NA	506871	494514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_506608
transcript_14280.known	chr11	-	1829	11	FSM	ENSG00000023191.17	ENST00000533410.5	1829	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	129.326911352587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATAATCATTAAAGCA	8	True	NA	-35	True	NA	NA	NA	507218	494545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_507112
transcript_14281.known	chr11	-	2014	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	127.653006231737	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-24	True	NA	-4	True	ATTAAA	-15	NA	506800	494514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
transcript_14282.known	chr11	-	1952	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	139.68120847129	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-16	True	NA	-4	True	ATTAAA	-15	NA	507242	494514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
transcript_14286.known	chr11	-	1725	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	112.079116676845	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTTATAATCATTAAAG	-9	True	NA	-37	True	NA	NA	NA	506785	494547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
transcript_14287.known	chr11	-	1722	10	FSM	ENSG00000023191.17	ENST00000397604.7	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	93.4409432558512	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-27	True	NA	-4	True	ATTAAA	-15	NA	507253	494514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_507112
transcript_14288.known	chr11	-	1864	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	120.382723012898	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTCTTGTCCTTCCTG	405	False	NA	-2	True	ATTAAA	-17	NA	506821	494512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
transcript_14289.known	chr11	-	1791	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_9	99.4932840961987	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATATTTTGGACACTTT	NA	False	NA	-50	True	NA	NA	NA	507300	494560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
transcript_14296.known	chr11	-	1114	7	FSM	ENSG00000174775.18	ENST00000493230.5	1114	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	115.313220789677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	15	True	NA	-5	True	AGTAAA	-18	NA	535538	532241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_532523_532630_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
transcript_14298.known	chr11	-	1070	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_5	9.09065454189081	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-23	True	NA	-5	True	AGTAAA	-18	NA	535576	532241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
transcript_14299.nic	chr11	+	1578	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	184.67116721351	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	-38	True	NA	27	True	AATAAA	-19	NA	560964	564025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_14300.nic	chr11	+	1491	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_4	159.164223366936	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	-38	True	NA	23	True	AATAAA	-15	NA	560964	564021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
transcript_14303.known	chr11	+	1731	4	FSM	ENSG00000099849.15	ENST00000397582.7	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	65.6370491584	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCTTGAGTGTGTG	1468	False	NA	14	True	AATAAA	-6	NA	560955	564012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_561034_561761_561893_562078_562777_563188
transcript_14304.known	chr11	+	2210	2	FSM	ENSG00000254815.6	ENST00000527620.5	2210	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	1924	False	NA	20	True	ATTAAA	-14	NA	557594	560106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_559477_559778
transcript_14305.known	chr11	+	2765	14	FSM	ENSG00000161328.11	ENST00000270115.8	2765	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.69230769230769	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGCCCAGCCCCGG	11	True	NA	4	True	AATAAA	-13	NA	537526	554912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_537606_538597_538861_539579_539727_540673_540862_541536_541625_544719_544781_549901_549999_550071_550273_551130_551303_551650_551828_551902_551968_552089_552233_552568_552703_553962
transcript_14306.known	chr11	-	1965	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	27	0	7	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTTTTGTTGTTA	-6	True	NA	-3	True	TATAAA	-16	NA	568420	565659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_567556_568351
transcript_14307.known	chr11	-	816	2	FSM	ENSG00000247095.4	ENST00000533920.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCCGCCCTGCTGTGG	7390	False	NA	-100	True	NA	NA	NA	568457	567143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_567854_568351
transcript_14308.known	chr11	-	1776	9	FSM	ENSG00000185507.21	ENST00000533182.5	1776	9	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	16.7551298114936	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACGTACTGGCATCTT	-1	True	NA	-11	True	AATAAA	-10	NA	615950	612560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_612801_612998_613118_613205_613596_613784_614038_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_14309.known	chr11	-	526	4	FSM	ENSG00000070031.4	ENST00000176195.4	526	4	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_3	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGAGTTGTCTGTGTC	-1	True	NA	-7	True	AATAAA	-19	NA	627181	626308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_626531_626696_626790_626887_626990_627072
transcript_14312.known	chr11	-	1764	11	FSM	ENSG00000177030.19	ENST00000682936.1	1764	11	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_7	31.5754651588856	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAAGGTCTCCCTGCCC	6404	False	NA	-26	True	AATAAA	-4	NA	691647	644243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500
transcript_14313.nic	chr11	+	802	6	NIC	ENSG00000177042.16	novel	1423	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	23.7436307248913	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	136	False	NA	22	True	AATAAA	-23	NA	695783	704129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944_703147_703799
transcript_14314.known	chr11	+	1423	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	20.2051973511767	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	8	True	NA	22	True	AATAAA	-23	NA	695815	704129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
transcript_14316.nnic	chr11	+	1244	5	NNC	ENSG00000177106.17	novel	750	3	NA	NA	-161	0	intron_retention	FALSE	canonical	0	0	junction_1	108.162782416134	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	135	False	NA	17	True	ATTAAA	-17	NA	725919	727724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_725953_726097_726171_726303_726485_726618_726752_726900
transcript_1432.known	chr1	+	931	2	FSM	ENSG00000001461.17	ENST00000488155.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAGGCAGAGAAACACC	13	True	NA	NA	False	ATTAAA	-12	NA	24415811	24420128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24415905_24419290
transcript_14330.known	chr11	+	1199	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	102.156742312977	2623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	17	True	NA	21	True	ATTAAA	-15	NA	747463	765012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
transcript_1434.nic	chr1	-	487	2	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	44080	0	0	5prime_fragment	FALSE	canonical	3	114	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGTTAGTTCCAT	-27	True	NA	NA	False	AATAAA	-17	NA	24413782	24401078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_24401457_24413673
transcript_14346.known	chr11	+	1191	4	FSM	ENSG00000177156.11	ENST00000530119.5	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	43.1817862838798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCAGTTAGCTGAGATC	17	True	NA	NA	False	NA	NA	NA	747463	760965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_747579_755878_756003_758949_759058_760121
transcript_1435.known	chr1	+	2421	5	FSM	ENSG00000117602.13	ENST00000538532.6	2421	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34.1540627158761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCCCTAATTTTTTT	-9	True	NA	NA	False	NA	NA	NA	24502350	24536800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24502464_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_14352.known	chr11	-	790	8	FSM	ENSG00000177225.17	ENST00000397472.6	790	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	23.8079047068534	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	16	True	NA	-30	True	AATAAA	-21	NA	777471	767221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_767374_770313_770399_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_14354.known	chr11	-	4363	8	FSM	ENSG00000177225.17	ENST00000319863.13	4363	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	12.8364913509916	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	0	True	NA	-30	True	AATAAA	-21	NA	777487	767221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_14358.nic	chr11	-	730	7	NIC	ENSG00000177225.17	novel	756	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	17.2916164657906	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	-15	True	NA	-36	True	AATAAA	-15	NA	777502	767227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_14360.known	chr11	-	1605	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTCTTGCATCCTCAT	3	True	NA	-5	True	AATAAA	-15	NA	790090	787114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_788659_790029
transcript_14362.known	chr11	-	2984	16	FSM	ENSG00000177595.19	ENST00000347755.10	2984	16	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_15	29.8281000996637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	10	True	NA	-12	True	NA	NA	NA	805231	799183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
transcript_14363.nic	chr11	-	3068	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	32.4075437034171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	-17	True	NA	-12	True	NA	NA	NA	809548	799183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_809411
transcript_1437.known	chr1	+	6863	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.75640815054393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	-1	True	NA	21	True	AATAAA	-23	NA	24502835	24541040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_14371.known	chr11	-	2640	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_9	51.9358578761662	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-10	True	NA	-6	True	AATAAA	-18	NA	798281	790474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
transcript_14379.known	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	5928	junction_1	1236.54283690457	9984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	-3	True	NA	30	True	AATAAA	-18	NA	809966	812876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
transcript_14380.known	chr11	+	353	4	FSM	ENSG00000177600.9	ENST00000532004.5	353	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3756.21816311152	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCATGAGCACTTTGT	-5	True	NA	34	True	AATAAA	-22	NA	809964	812880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_810049_811596_811646_812534_812634_812759
transcript_14381.known	chr11	+	637	4	FSM	ENSG00000177600.9	ENST00000530797.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	6779	junction_3	930.305087353367	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	14	False	NA	28	True	AATAAA	-16	NA	809983	812874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_810358_811596_811646_812534_812634_812759
transcript_14382.known	chr11	+	714	4	FSM	ENSG00000177685.17	ENST00000526531.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	65.2703778311588	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACTCAGGATGCAGGCT	25	False	NA	NA	False	NA	NA	NA	830484	831780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_830714_830865_831033_831223_831296_831534
transcript_14383.nic	chr11	+	816	3	ISM	ENSG00000177685.17	ENST00000450448.5	1663	8	2162	5	-63	0	3prime_fragment	FALSE	canonical	3	84	junction_1	106.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	2	True	NA	14	True	AATAAA	-15	NA	830421	831986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_830714_831223_831296_831534
transcript_14384.nnic	chr11	+	893	3	NNC	ENSG00000177685.17	novel	1792	9	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	145.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	-19	True	NA	14	True	AATAAA	-15	NA	830440	831986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_830714_831127_831296_831534
transcript_14386.known	chr11	+	1545	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_1	121.901343306791	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	-18	True	NA	24	True	AATAAA	-16	NA	832951	838831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_14387.known	chr11	+	1835	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	127.322826079287	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	22	True	NA	28	True	AATAAA	-20	NA	832991	838835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
transcript_14388.known	chr11	+	1486	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	124.479979539372	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	-18	True	NA	27	True	AATAAA	-19	NA	832951	838834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_14391.known	chr11	-	876	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	3328	junction_1	0	1897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTTTGCACCAC	-6	True	NA	-2	True	GGGGCT	-42	NA	842529	839720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_840481_842413
transcript_14393.known	chr11	+	1379	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	157.932689380635	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-2	True	NA	14	True	AATAAA	-14	NA	842851	867111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14394.nnic	chr11	+	1452	9	NNC	ENSG00000214063.12	novel	1379	9	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	198.996859271698	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-5	True	NA	14	True	AATAAA	-14	NA	842908	867111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_843046_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14396.known	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	194.614201691449	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	-14	True	NA	19	True	AATAAA	-19	NA	842940	867116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14398.known	chr11	+	1462	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.579259983575	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	18	True	NA	19	True	AATAAA	-19	NA	844445	867116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14402.nic	chr11	+	1476	8	NIC	ENSG00000214063.12	novel	1379	9	NA	NA	10	0	intron_retention	FALSE	canonical	3	192	junction_1	168.500469326543	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-20	True	NA	14	True	AATAAA	-14	NA	842833	867111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865826_865917_866002_866561
transcript_14404.known	chr11	+	1332	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	251.445453978652	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	12	False	NA	19	True	AATAAA	-19	NA	842823	867116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14418.known	chr11	+	1426	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	211.261353245216	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	-32	True	NA	19	True	AATAAA	-19	NA	844080	867116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_14425.known	chr11	-	1477	14	FSM	ENSG00000177830.18	ENST00000436108.6	1477	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	207.24998483237	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGGGTCTGCTGCAGT	-10	True	NA	-11	True	AATACA	-19	NA	910831	869766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_14429.known	chr11	-	3260	13	FSM	ENSG00000177830.18	ENST00000323578.13	3260	13	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_12	91.9188576348123	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTTTGTGCTGCCAG	11	True	NA	NA	False	NA	NA	NA	910810	867858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_14435.known	chr11	-	1289	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	160.612361225755	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-14	True	NA	-6	True	AATACA	-24	NA	910835	869761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_1444.nic	chr1	+	3785	18	NIC	ENSG00000133226.18	novel	3110	18	NA	NA	0	-19	combination_of_known_junctions	FALSE	canonical	1	465	junction_6	417.954981764791	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGCCACTCTTAC	-16	True	NA	20	True	AATAAA	-12	NA	24643274	24673262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_14452.nic	chr11	-	1209	5	ISM	ENSG00000078902.16	ENST00000527886.5	3666	6	6995	2251	-3625	194	3prime_fragment	FALSE	canonical	3	340	junction_2	13.0958008537088	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCACACTGTGGGTTTT	9892	False	NA	-8	True	AATAGA	-25	NA	1295795	1276622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644
transcript_14453.known	chr11	+	939	1	FSM	ENSG00000255153.1	ENST00000530897.1	939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGACTGGCCTGGAA	NA	False	NA	4	True	AATAAA	-16	NA	1309768	1310707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_1309800_1310700
transcript_14454.known	chr11	-	795	5	FSM	ENSG00000182208.15	ENST00000526462.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.5567159000768	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGGGCAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	1501247	1470244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1501076
transcript_14455.known	chr11	-	1982	9	FSM	ENSG00000117984.15	ENST00000637915.1	1982	9	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	393.16295524248	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATACAGTTGTTGGCCT	92	False	NA	-38	True	NA	NA	NA	1763896	1752787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_1753662_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
transcript_14460.known	chr11	+	1482	8	FSM	ENSG00000110651.12	ENST00000263645.10	1482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_1	137.734142018423	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGTGCAGTCCCTC	-3	True	NA	30	True	AATAAA	-22	NA	2377309	2397397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2377616_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627_2396715_2396803
transcript_14464.known	chr11	+	1544	4	FSM	ENSG00000184281.15	ENST00000380996.9	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	130.742325034992	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTATCTGGGCCC	96	False	NA	21	True	AATAAA	-21	NA	2400487	2403878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2400799_2402293_2402451_2402610_2402653_2402844
transcript_14465.known	chr11	+	863	4	FSM	ENSG00000184281.15	ENST00000435795.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	158.800363839494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCATGAGTGACAACG	11	True	NA	NA	False	NA	NA	NA	2400762	2402971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2400799_2401838_2402148_2402293_2402451_2402610
transcript_14467.known	chr11	+	1472	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	67.5	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	-2	True	NA	19	True	AATAAA	-19	NA	2400749	2403876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2400799_2402293_2402451_2402610
transcript_14468.nic	chr11	+	2823	3	ISM	ENSG00000184281.15	ENST00000440813.1	851	4	-1352	-428	-2	0	intron_retention	FALSE	canonical	3	40	junction_1	159	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	-4	True	NA	19	True	AATAAA	-19	NA	2400747	2403876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_2402148_2402293_2402451_2402610
transcript_14469.known	chr11	+	1423	2	FSM	ENSG00000184281.15	ENST00000451491.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	18	False	NA	18	True	AATAAA	-18	NA	2402292	2403875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2402451_2402610
transcript_14470.known	chr11	+	1225	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	37.7491721763537	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	-22	True	NA	-6	True	AATAAA	-2	NA	2902282	2925227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_14483.known	chr11	-	1941	16	FSM	ENSG00000205531.13	ENST00000526115.5	1941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	530.763081693602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGTGTAGAGTAGGG	5	True	NA	NA	False	NA	NA	NA	2992377	2945111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2989128_2989272_2992253
transcript_14485.known	chr11	-	2463	16	FSM	ENSG00000205531.13	ENST00000380542.9	2463	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	479.423987718596	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCACTGTGCCATGTGG	-25	True	NA	-8	True	ATTAAA	-16	NA	2992329	2944436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_1449.known	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	1	465	junction_6	317.272697917344	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	11	True	NA	39	True	AATAAA	-31	NA	24643301	24673281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_14490.known	chr11	-	2479	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	379.518444874554	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	5	True	NA	-2	True	ATTAAA	-22	NA	2992377	2944430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_14491.nic	chr11	-	2552	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	472.661337318717	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	NA	False	NA	-2	True	ATTAAA	-22	NA	2992414	2944430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972280_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_14502.known	chr11	-	2737	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_21	157.761248633015	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-14	True	NA	-9	True	AATAAA	-17	NA	3057423	3000928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
transcript_14506.known	chr11	-	2491	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	99.63709660768	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-9	True	NA	-9	True	AATAAA	-17	NA	3057418	3000928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_14507.nic	chr11	-	2574	22	NIC	ENSG00000110619.18	novel	2805	23	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_20	130.322850457907	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	165	False	NA	-9	True	AATAAA	-17	NA	3057462	3000928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
transcript_14522.known	chr11	-	2685	22	FSM	ENSG00000110619.18	ENST00000397111.9	2685	22	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	60.589881885081	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTCTGCATGTT	14	True	NA	-2	True	AATAAA	-24	NA	3057613	3000921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_14532.known	chr11	+	293	2	FSM	ENSG00000234791.1	ENST00000455154.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGGCTGTGAGCTC	78	False	NA	NA	False	AATACA	-14	NA	3189545	3189929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3189619_3189709
transcript_14536.known	chr11	-	1001	6	FSM	ENSG00000005801.18	ENST00000528410.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	162.822602853535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAACATTACAGATGTGA	12	True	NA	NA	False	ATTAAA	-40	NA	3379139	3360038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3360719_3360789_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14538.known	chr11	-	2389	6	FSM	ENSG00000005801.18	ENST00000429541.6	2389	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	176.777374117843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATTATACTAGATGGAA	-1	True	NA	59	True	AATATA	-43	NA	3379218	3358944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3377616_3377901_3379037
transcript_14539.known	chr11	-	3187	6	FSM	ENSG00000005801.18	ENST00000399602.9	3187	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	187.67056242256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	5	True	NA	-2	True	AATAAA	-15	NA	3379146	3357926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_14541.known	chr11	-	1018	6	FSM	ENSG00000005801.18	ENST00000438262.6	1018	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	162.974353810653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTCCCACCTTACTGA	25	True	NA	NA	False	NA	NA	NA	3379126	3359996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3362545_3362603_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14549.known	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	149.541164901174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	5	True	NA	-34	True	NA	NA	NA	3379146	3359116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14557.known	chr11	-	2021	5	FSM	ENSG00000005801.18	ENST00000005082.13	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	172.672196661767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	35	True	NA	10	True	AATAAA	-40	NA	3379116	3358993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_14558.nic	chr11	-	2663	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	-1	-285	combination_of_known_junctions	FALSE	canonical	3	120	junction_4	150.647767988776	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGTGGTTGTTTTAT	-2	True	NA	-18	True	AGTAAA	-15	NA	3379219	3358387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14559.known	chr11	-	579	5	FSM	ENSG00000005801.18	ENST00000529678.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	183.572192883345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATAATGGACTTAACCA	12	True	NA	-95	True	NA	NA	NA	3379139	3360410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373676_3379037
transcript_14560.nic	chr11	-	2870	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	0	-285	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	192.442199114435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGTGGTTGTTTTAT	-5	True	NA	-18	True	AGTAAA	-15	NA	3379222	3358387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3377616_3377901_3379037
transcript_14565.nic	chr11	-	2488	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	-1	382	combination_of_known_junctions	FALSE	canonical	3	120	junction_4	150.647767988776	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGATGCTGTGTCTTC	-2	True	NA	-6	True	NA	NA	NA	3379219	3358562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_14576.known	chr11	-	2970	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	52.1621403787161	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	6	True	NA	-2	True	AATAAA	-15	NA	3379145	3357926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
transcript_146.known	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	10867.1241200237	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
transcript_1460.nic	chr1	+	910	7	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-90	19086	-54	0	5prime_fragment	FALSE	canonical	1	465	junction_6	442.043644149911	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAGAAGGAGAAGAC	98	False	NA	NA	False	NA	NA	NA	24643217	24652509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433
transcript_14600.nnic	chr11	+	1696	13	NIC	ENSG00000223756.8	novel	1329	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_11	32.8771915196877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	NA	False	NA	24	True	AATGAA	-18	NA	3380917	3408978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406698_3407621_3407698_3408685
transcript_14602.nnic	chr11	+	1714	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	27.8388218141501	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	NA	False	NA	24	True	AATGAA	-18	NA	3380917	3408978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
transcript_14604.nnic	chr11	+	1587	12	NIC	ENSG00000223756.8	novel	1329	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	40.6547650018466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	NA	False	NA	24	True	AATGAA	-18	NA	3380917	3408978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406698_3407621_3407698_3408685
transcript_14608.nnic	chr11	+	1144	7	NNC	ENSG00000223756.8	novel	2337	9	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	36.0111865335698	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGACAGCGGTGTGC	0	True	NA	NA	False	AATAAA	-13	NA	3380960	3398085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_3381045_3381704_3381933_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3397816
transcript_1461.known	chr1	+	768	7	FSM	ENSG00000133226.18	ENST00000468822.5	768	7	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_5	659.536642904193	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	-16	True	NA	NA	False	AAAAAG	-5	NA	24643274	24652514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433
transcript_14613.nnic	chr11	+	1009	5	NNC	ENSG00000223756.8	novel	674	6	NA	NA	0	-5944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.3757239301301	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAACAAATCTAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	3380917	3391295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3390686
transcript_14616.nic	chr11	+	2880	4	NIC	ENSG00000223756.8	novel	1187	9	NA	NA	0	3037	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	15.1730755689881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGGGGGGCAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	3380917	3387448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898
transcript_14617.known	chr11	+	382	3	FSM	ENSG00000223756.8	ENST00000530366.5	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACACTGGTGACATGTTA	32	False	NA	NA	False	NA	NA	NA	3380992	3384411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3381045_3383461_3383547_3384166
transcript_14622.nic	chr11	-	592	2	ISM	ENSG00000255367.3	ENST00000527970.1	983	5	-36	26606	-36	-146	5prime_fragment	FALSE	canonical	2	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCATTATTGCTCATGA	NA	False	NA	-19	True	TTTAAA	-7	NA	3581247	3508125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_3508397_3580926
transcript_14625.nnic	chr11	-	606	4	NNC	ENSG00000167311.14	novel	1232	4	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.2999761564017	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	369	False	NA	-13	True	ATTAAA	-18	NA	3642010	3638511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_3638794_3639002_3639036_3639641_3639728_3641805
transcript_14627.nnic	chr11	-	678	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	20.0720922897661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	365	False	NA	-13	True	ATTAAA	-18	NA	3642014	3638511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3638794_3639002_3639036_3639641_3639796_3641805
transcript_14628.known	chr11	-	1232	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	5.18544972870135	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
transcript_14629.nic	chr11	-	1050	4	NIC	ENSG00000167311.14	novel	1154	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	20.9920619917784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	365	False	NA	-13	True	ATTAAA	-18	NA	3642014	3638511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3638794_3639002_3639036_3639845_3640372_3641805
transcript_14631.nnic	chr11	-	804	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	21.9241115365405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	365	False	NA	-13	True	ATTAAA	-18	NA	3642014	3638511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3638920_3639002_3639036_3639641_3639796_3641805
transcript_14632.nic	chr11	-	1372	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-14	0	intron_retention	FALSE	canonical	2	8	junction_1	21.6846079563875	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	373	False	NA	-13	True	ATTAAA	-18	NA	3642006	3638511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3638920_3639002_3639036_3639641_3640372_3641805
transcript_14633.known	chr11	-	1154	4	FSM	ENSG00000167311.14	ENST00000397067.7	1154	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	22.4251842554055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3638920_3639002_3639036_3639845_3640372_3641805
transcript_14634.nnic	chr11	-	1139	3	NIC	ENSG00000167311.14	novel	1154	4	NA	NA	-9	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	378	False	NA	-4	True	ATTAAA	-27	NA	3642001	3638502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3638920_3639845_3640372_3641805
transcript_14636.nic	chr11	-	2076	2	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-20	9	intron_retention	FALSE	canonical	3	54	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	367	False	NA	-4	True	ATTAAA	-27	NA	3642012	3638502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_3640372_3641805
transcript_14637.known	chr11	-	3923	20	FSM	ENSG00000110713.17	ENST00000397004.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	38.2375574968394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGATGGCCTTATTTT	3	True	NA	NA	False	TATAAA	-22	NA	3797541	3711552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_14638.known	chr11	+	1259	8	FSM	ENSG00000148985.20	ENST00000464906.6	1259	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	106.898960495891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAGAAGCTGAGCTGGC	8	True	NA	NA	False	NA	NA	NA	3797925	3825680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_1464.known	chr1	+	673	6	FSM	ENSG00000133226.18	ENST00000490543.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	756.441246892315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	14	True	NA	107	True	AAAAAG	-44	NA	24643304	24650086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24647078_24647209_24648858_24649030_24649970
transcript_14643.known	chr11	+	1843	7	FSM	ENSG00000148985.20	ENST00000300730.10	1843	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	100.625405451219	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	NA	False	NA	18	True	AATAAA	-18	NA	3797818	3826352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14644.known	chr11	+	1837	7	FSM	ENSG00000148985.20	ENST00000396986.6	1837	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	98.3796501089303	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	NA	False	NA	0	True	NA	NA	NA	3797818	3826334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14645.known	chr11	+	830	7	FSM	ENSG00000148985.20	ENST00000464261.5	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	107.179625966049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTTGTCTTAACCAAC	7	True	NA	NA	False	NA	NA	NA	3797924	3825354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_14654.nic	chr11	+	1861	7	NIC	ENSG00000148985.20	novel	1963	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	97.2585329018602	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-23	True	NA	18	True	AATAAA	-18	NA	3808544	3826352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3808652_3811249_3811425_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_1466.nic	chr1	+	1639	6	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-90	19178	-54	-92	5prime_fragment	FALSE	canonical	3	1419	junction_5	127.609404042179	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTTTCCACAGTGAC	98	False	NA	NA	False	NA	NA	NA	24643217	24652417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408
transcript_14661.known	chr11	+	1474	6	FSM	ENSG00000148985.20	ENST00000477358.6	1474	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	110.588607008136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	-6	True	NA	-17	True	NA	NA	NA	3797911	3826317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3824269_3824377_3825019_3825129_3825327
transcript_14663.known	chr11	+	863	6	FSM	ENSG00000148985.20	ENST00000464229.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	112.15988587726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAAACATCACCTTTAC	6	True	NA	NA	False	NA	NA	NA	3797923	3825652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14664.known	chr11	+	1566	6	FSM	ENSG00000148985.20	ENST00000396993.8	1566	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	109.779779558897	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAATAAATTTTTT	-16	True	NA	-13	True	NA	NA	NA	3797901	3826321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14668.known	chr11	+	798	6	FSM	ENSG00000148985.20	ENST00000469307.4	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	80.616127418774	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAAGCGATTCTGAAC	31	True	NA	NA	False	NA	NA	NA	3808598	3825440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14670.known	chr11	+	931	6	FSM	ENSG00000148985.20	ENST00000463452.6	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	67.0086561572458	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCTTGGCCTTACTGA	11	True	NA	NA	False	AAGAAA	-33	NA	3808578	3825541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14671.nic	chr11	+	1855	6	NIC	ENSG00000148985.20	novel	931	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	94.527456328836	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-23	True	NA	18	True	AATAAA	-18	NA	3808544	3826352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_14674.nnic	chr11	+	1674	6	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	108.370475684109	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-11	True	NA	18	True	AATAAA	-18	NA	3808556	3826352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3808652_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14676.known	chr11	+	894	6	FSM	ENSG00000148985.20	ENST00000479072.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	110.293426821366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGGGTGTAGGCCAA	26	True	NA	NA	False	NA	NA	NA	3808593	3825578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14677.nic	chr11	+	1715	6	NIC	ENSG00000148985.20	novel	894	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	107.526740860123	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-9	True	NA	18	True	AATAAA	-18	NA	3808558	3826352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_14681.known	chr11	+	699	5	FSM	ENSG00000148985.20	ENST00000464441.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	115.914569834857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACCTTTCACTGAGGT	54	False	NA	NA	False	NA	NA	NA	3797971	3825777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3797983_3808293_3808316_3824269_3824377_3825019_3825129_3825327
transcript_14687.nic	chr11	+	1583	5	NIC	ENSG00000148985.20	novel	894	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	91.4248325128354	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-17	True	NA	18	True	AATAAA	-18	NA	3808550	3826352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_3808652_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_14688.known	chr11	+	1530	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	74.2710407897991	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	26	True	NA	-4	True	NA	NA	NA	3808593	3826330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_147.known	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	16794	junction_3	6208.15930852294	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
transcript_1470.nic	chr1	+	576	5	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-57	2482	-54	0	5prime_fragment	FALSE	canonical	3	1533	junction_1	95.132473425219	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAGAAAGCAGCA	98	False	NA	53	True	GATAAA	-9	NA	24643217	24650032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970
transcript_14702.known	chr11	-	1295	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCTCCTCCCTGTGT	-3	True	NA	-8	True	AATAAA	-18	NA	3840959	3826977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_3828207_3840893
transcript_14704.known	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_15	82.4090407661684	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	2	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_14709.known	chr11	+	2863	18	FSM	ENSG00000167325.15	ENST00000533349.5	2863	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	218.235309973045	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATGAGATTAATTTTG	-7	True	NA	19	True	AATAAA	-19	NA	4094842	4138875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_4095032_4101992_4102082_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_14711.nic	chr11	+	1804	13	ISM	ENSG00000167325.15	ENST00000300738.10	3142	19	-4	11983	-4	0	5prime_fragment	FALSE	canonical	3	782	junction_6	59.5335456323202	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGTCTGTCTCATTTGGT	-2	True	NA	NA	False	AATAAA	-18	NA	4094794	4126949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683
transcript_14715.known	chr11	-	1935	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	6.94422221866655	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTCTATCCCATTCAG	-16	True	NA	-18	True	AATAAA	-23	NA	4393702	4384896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
transcript_14716.known	chr11	-	3324	7	FSM	ENSG00000167333.13	ENST00000300747.10	3324	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.32165848854662	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGACTGCTTCTTGAG	-33	True	NA	-2	True	AATAAA	-19	NA	4608231	4598671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602413_4603244_4603341_4605078_4605562_4608026
transcript_14719.nnic	chr11	-	2260	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11122	-4108	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTCAGAGTCATACA	NA	False	NA	NA	False	AATAAA	-16	NA	5165879	5150931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_1472.nic	chr1	+	493	4	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-57	3506	-54	121	5prime_fragment	FALSE	canonical	3	1533	junction_1	109.770467592862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAATAAAACAAAGACA	98	False	NA	NA	False	AAGAAA	-42	NA	24643217	24649008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858
transcript_14721.nnic	chr11	-	1724	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11069	-4591	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTACATGCTTTTTTCTT	NA	False	NA	-6	True	CATAAA	-16	NA	5165826	5151414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_14723.nnic	chr11	-	1240	4	NNC	ENSG00000213931.7	novel	918	4	NA	NA	80816	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.18993502999218	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATTTTATCTTCTCCA	NA	False	NA	-4	True	AATAAA	-26	NA	5424788	5268344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_5268598_5269453_5269677_5269798_5270157_5424382
transcript_14725.known	chr11	+	2590	9	FSM	ENSG00000121236.21	ENST00000380107.5	2590	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.8795801798766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTCTTTCAAATTAATTG	16	False	NA	NA	False	AATAAA	-7	NA	5596128	5612423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5596182_5603245_5603562_5603639_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_1473.known	chr1	+	2624	4	FSM	ENSG00000133226.18	ENST00000462710.5	2624	4	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	108.603253481038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	2	True	NA	107	True	AAAAAG	-44	NA	24643292	24650086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24643348_24645983_24646074_24646666_24649030_24649970
transcript_14731.known	chr11	+	3217	8	FSM	ENSG00000121236.21	ENST00000278302.9	3217	8	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_3	35.6891340006211	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-4	True	NA	7	True	AATAAA	-18	NA	5596108	5612952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14733.nic	chr11	+	2853	8	NIC	ENSG00000121236.21	novel	3217	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	54.5407542810972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-2	True	NA	7	True	AATAAA	-18	NA	5596110	5612952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_5596182_5603607_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14735.known	chr11	+	2951	8	FSM	ENSG00000121236.21	ENST00000445329.5	2951	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	54.5407542810972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	17	False	NA	7	True	AATAAA	-18	NA	5596745	5612952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5596915_5603607_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14736.known	chr11	+	3422	8	FSM	ENSG00000121236.21	ENST00000380097.8	3422	8	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	49.9052162829187	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-30	True	NA	7	True	AATAAA	-18	NA	5596636	5612952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5596915_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14738.known	chr11	+	2293	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.01695886884898	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	-8	True	NA	15	True	AATAAA	-26	NA	5625000	5644398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
transcript_1474.known	chr1	+	4253	6	FSM	ENSG00000169504.15	ENST00000374379.9	4253	6	0	0	0	0	multi-exon	FALSE	canonical	3	2705	junction_2	131.424503042621	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAGACTACTATTTT	0	True	NA	16	True	AATAAA	-19	NA	24745446	24844321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772
transcript_14743.nic	chr11	+	2725	7	NIC	ENSG00000121236.21	novel	3217	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	55.6758974382592	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-2	True	NA	7	True	AATAAA	-18	NA	5596110	5612952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_5596182_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_14747.known	chr11	-	3364	8	FSM	ENSG00000132256.20	ENST00000380034.8	3364	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	11.7351730159502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGGGGTAATCCATTA	-13	True	NA	33	True	TTTAAA	-41	NA	5685074	5663194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_14748.known	chr11	-	2862	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	18.3213937621502	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAAGCATCTATCTAA	-36	True	NA	-18	True	AATAAA	-8	NA	5685097	5663571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_14749.known	chr11	-	3170	7	FSM	ENSG00000132256.20	ENST00000396847.7	3170	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	12.5521135891752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTAATACTTTGGA	19	True	NA	-19	True	AATAAA	-9	NA	5685042	5663616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_14750.nic	chr11	-	1286	7	ISM	ENSG00000132256.20	ENST00000684655.1	2862	8	-12	1848	-10	0	5prime_fragment	FALSE	canonical	3	43	junction_6	19.5056971734471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACCTGTTAATTTTTCT	-48	True	NA	1	True	AATAAA	-19	NA	5685109	5665419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_14753.known	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_3	25.9968600929781	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	-38	True	NA	13	True	AATAAA	-17	NA	5689789	5710863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_14760.known	chr11	+	1002	7	FSM	ENSG00000132274.16	ENST00000454828.5	1002	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	56.9151415120206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTGCTTTTGGTGTC	52	False	NA	NA	False	NA	NA	NA	5689879	5709163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5689900_5696166_5696656_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_14762.known	chr11	+	1333	2	FSM	ENSG00000180988.3	ENST00000317037.3	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAATATGTCAATTTTC	NA	False	NA	NA	False	AATAAA	-44	NA	5808923	5821483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_5809055_5820281
transcript_14763.known	chr11	+	1916	6	FSM	ENSG00000132259.13	ENST00000379936.3	1916	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.56124969497314	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCATCCTGTCTGCGA	3	True	NA	NA	False	AGTAAA	-16	NA	6239088	6244479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6239269_6239383_6239486_6239683_6239791_6240065_6240712_6241430_6241781_6243948
transcript_14770.known	chr11	+	2019	5	FSM	ENSG00000110148.10	ENST00000334619.7	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	1855	junction_4	114.326287440816	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	-14	True	NA	19	True	AATAAA	-21	NA	6259837	6272127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645_6270804_6271010
transcript_14774.known	chr11	+	2138	4	FSM	ENSG00000110148.10	ENST00000525462.1	2138	4	0	0	0	0	multi-exon	FALSE	canonical	3	1869	junction_2	104.499867091888	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	74	False	NA	19	True	AATAAA	-21	NA	6259925	6272127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645
transcript_14776.known	chr11	+	1734	4	FSM	ENSG00000110148.10	ENST00000532715.5	1734	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	933.80333404131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCTCTCCTTCCTTA	90	False	NA	-46	True	NA	NA	NA	6259805	6272062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6260080_6270087_6270338_6270645_6270804_6271010
transcript_14777.known	chr11	+	2410	6	FSM	ENSG00000166311.10	ENST00000342245.9	2410	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_5	1.95959179422654	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGTGTGACTGTCCC	7	True	NA	8	True	AATAAA	-21	NA	6390473	6394996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6390917_6391383_6392157_6393215_6393388_6393616_6393694_6393895_6394042_6394197
transcript_14778.known	chr11	-	2666	15	FSM	ENSG00000166313.20	ENST00000609360.6	2666	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	131.893587286672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-10	True	NA	-37	True	AATAAA	-16	NA	6419094	6395124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_14779.known	chr11	-	1920	14	FSM	ENSG00000166313.20	ENST00000608655.5	1920	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	156.112082327156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	8970	False	NA	-37	True	AATAAA	-16	NA	6404843	6395124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6404744
transcript_1478.known	chr1	+	2723	7	FSM	ENSG00000169504.15	ENST00000488683.1	2723	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	1093.70188148122	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGATTCTTTTTTCCC	23	True	NA	13	True	AATAAA	-17	NA	24745381	24844267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772_24842588_24844128
transcript_14780.known	chr11	-	2636	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_4	19.9362890554329	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	14	True	NA	-37	True	AATAAA	-16	NA	6419070	6395124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_14781.nnic	chr11	-	2683	14	NNC	ENSG00000166313.20	novel	2666	15	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_12	95.329264337103	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-18	True	NA	-37	True	AATAAA	-16	NA	6419102	6395124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403838_6410626_6411362_6418984
transcript_14782.nic	chr11	-	1910	13	NIC	ENSG00000166313.20	novel	2666	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	98.9877587830379	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	5	True	NA	-37	True	AATAAA	-16	NA	6419079	6395124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6418984
transcript_14786.known	chr11	-	1575	10	FSM	ENSG00000110169.12	ENST00000265983.8	1575	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	3.62092683040007	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGGACCTTGGTCGTGA	2	True	NA	-7	True	AATAAA	-24	NA	6440987	6431048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6431471_6431640_6431804_6431886_6432018_6437045_6437178_6437439_6437653_6438355_6438510_6440164_6440287_6440466_6440539_6440671_6440731_6440880
transcript_14787.known	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_6	9.92534113742268	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-20	True	NA	-3	True	AATAAA	-15	NA	6473941	6448612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
transcript_1479.known	chr1	-	1757	7	FSM	ENSG00000117614.10	ENST00000236273.9	1757	7	0	0	0	0	multi-exon	TRUE	canonical	3	504	junction_6	73.432508695627	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGATATTTTAAATTCAA	-1	True	NA	NA	False	ATTAAA	-15	NA	25232502	25222275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25228997_25229124_25232103_25232212_25232443
transcript_14794.known	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	48.7258050896304	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	14	True	NA	NA	False	NA	NA	NA	6481312	6475679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_14796.known	chr11	-	1763	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_7	38.9887477226391	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-5	True	NA	NA	False	AATAAA	-16	NA	6481331	6476518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
transcript_14797.known	chr11	-	1560	8	FSM	ENSG00000132254.13	ENST00000531037.5	1560	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	100.838929962185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAGCACTAGGAATAAA	2	True	NA	NA	False	NA	NA	NA	6481324	6476553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478858_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_148.known	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11891.1818588398	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
transcript_14803.known	chr11	-	1430	7	FSM	ENSG00000132254.13	ENST00000423813.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	95.4474841062991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGGTGTGCTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	6481434	6476813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6481230
transcript_14813.known	chr11	+	608	4	FSM	ENSG00000132286.12	ENST00000533379.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	291.326086866399	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGTGGTTGTCTT	24	True	NA	NA	False	AGTAAA	-12	NA	6481507	6483058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6481556_6481756_6481853_6482044_6482290_6482839
transcript_14814.known	chr11	+	2788	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	68.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	17	True	NA	12	True	AATAAA	-17	NA	6481500	6484681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6481556_6481756_6481853_6482044
transcript_14816.known	chr11	-	6559	7	FSM	ENSG00000132275.11	ENST00000254605.11	6559	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	6.03922364399781	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATGTATAATATATAATA	-7	True	NA	NA	False	AATAAA	-18	NA	6603616	6595071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602216_6603403
transcript_14819.known	chr11	-	726	4	FSM	ENSG00000132275.11	ENST00000534343.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	39.8357739838062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	30	True	NA	-5	True	AATAAA	-19	NA	6603579	6599919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6603403
transcript_14824.known	chr11	+	1759	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	219.683800545744	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	1	True	NA	16	True	AATAAA	-15	NA	6603773	6610870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14827.known	chr11	+	1692	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	155.99330024787	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	-15	True	NA	-21	True	NA	NA	NA	6603757	6610833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_1483.known	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	258.087272061216	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-6	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
transcript_14830.nnic	chr11	+	1829	13	NNC	ENSG00000166333.14	novel	1759	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	313.971867104894	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	-14	True	NA	16	True	AATAAA	-15	NA	6603758	6610870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_6603878_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14831.known	chr11	-	3492	13	FSM	ENSG00000166340.18	ENST00000299427.12	3492	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	64.1133436449335	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGCCTCTCATTCGTT	-2	True	NA	-13	True	ATTAAA	-19	NA	6619422	6612767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_14835.known	chr11	+	1801	12	FSM	ENSG00000166333.14	ENST00000537806.5	1801	12	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	162.835565794464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGCCTGTCACAATAA	-29	True	NA	-19	True	NA	NA	NA	6603743	6610835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14836.known	chr11	+	1594	12	FSM	ENSG00000166333.14	ENST00000526711.5	1594	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	317.081004849492	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGGGACATGGGGA	-1	True	NA	20	True	AATAAA	-19	NA	6603730	6610874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6603823_6604225_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14846.known	chr11	-	3640	12	FSM	ENSG00000166340.18	ENST00000643479.1	3640	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.8785750569859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-9	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_14847.known	chr11	-	3787	11	FSM	ENSG00000166340.18	ENST00000646777.1	3787	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.8673027960862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-9	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_14848.known	chr11	-	5312	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_4	79.1596488117526	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-16	True	NA	-15	True	AATAAA	-17	NA	6612216	6606293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
transcript_14850.known	chr11	-	2107	5	FSM	ENSG00000166340.18	ENST00000524788.2	2107	5	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_4	18.9274932307477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGGGAATGCTATAAGC	7	True	NA	NA	False	NA	NA	NA	6619413	6616598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6616860_6616974_6617429_6617625_6618916_6619195_6619268_6619383
transcript_14853.known	chr11	+	2074	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_5	61.2535713244542	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	43	False	NA	16	True	AATAAA	-15	NA	6603815	6610870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_14854.known	chr11	-	2310	4	FSM	ENSG00000166340.18	ENST00000524903.2	2310	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	10.8012344973464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGGCCGGCATGAGG	7	True	NA	NA	False	NA	NA	NA	6619413	6616511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6616860_6616974_6617429_6617625_6618916_6619195
transcript_14855.known	chr11	-	2305	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	15.5	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGTACATGAATCC	-26	True	NA	NA	False	NA	NA	NA	6683340	6680384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6682403_6682746_6682816_6683122
transcript_14856.known	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	18	True	NA	-67	True	AATAGA	-4	NA	6683296	6681950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_6682403_6682746
transcript_14861.known	chr11	+	3655	7	FSM	ENSG00000149054.16	ENST00000278319.10	3655	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	5.03322295684717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCATCCTTTATAT	-16	True	NA	9	True	ATTAAA	-16	NA	6926425	6958047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
transcript_14865.known	chr11	+	1602	6	FSM	ENSG00000149054.16	ENST00000527171.5	1602	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	22.9834723225191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCTATGAATGTTATCA	NA	False	NA	NA	False	AAAAAG	-14	NA	6926403	6956105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943545_6943642_6955689
transcript_14870.known	chr11	-	556	4	FSM	ENSG00000149050.10	ENST00000531083.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.48528137423857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCAGAACTATGGGGAA	33	False	NA	NA	False	NA	NA	NA	7020314	7001447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7001556_7002708_7002852_7019682_7019746_7020072
transcript_14871.known	chr11	-	4892	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTAGAGGAGTCTT	1	True	NA	NA	False	AATAAA	-22	NA	7020346	6997084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7001556_7002708_7002856_7020072
transcript_14875.known	chr11	+	3328	24	FSM	ENSG00000166387.14	ENST00000299492.9	3328	24	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_5	84.2673977818379	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	5	True	NA	29	True	AATAAA	-20	NA	7513998	7653756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_14878.known	chr11	+	2965	20	FSM	ENSG00000166387.14	ENST00000530181.5	2965	20	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	20.5478968870781	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTCACCATATCTTTAA	8	True	NA	33	True	AATAAA	-24	NA	7605737	7653760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7606016_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_14885.known	chr11	-	1249	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	103.418748300296	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-17	True	NA	-7	True	AATAAA	-16	NA	7673500	7665103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_14887.nic	chr11	-	1305	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_8	89.3220997290144	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-5	True	NA	-7	True	AATAAA	-16	NA	7674249	7665103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
transcript_14888.nic	chr11	-	1509	9	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	-324	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_8	74.4579369510061	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	2678	False	NA	-7	True	AATAAA	-16	NA	7674567	7665103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
transcript_14896.known	chr11	-	2503	8	FSM	ENSG00000254951.7	ENST00000527847.5	2503	8	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_2	5.99319341811515	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAAACAAACAAAAA	305	False	NA	NA	False	NA	NA	NA	7905955	7850750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_7852325_7854882_7854964_7879006_7879084_7879594_7879760_7881088_7881150_7881955_7882074_7882859_7882934_7905602
transcript_14901.nnic	chr11	+	1833	3	Antisense	novelGene_ENSG00000279000.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	2.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTT	194	False	NA	12	True	AATAAA	-18	NA	7906398	7935974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_+_7906667_7907161_7907336_7934583
transcript_14903.known	chr11	+	6920	8	FSM	ENSG00000175390.15	ENST00000651655.1	6920	8	0	0	0	0	multi-exon	FALSE	canonical	3	2169	junction_2	108.21784529742	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAACAATACCTTATAT	0	True	NA	NA	False	TATAAA	-20	NA	7987336	8001852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_14905.known	chr11	-	2929	6	FSM	ENSG00000166405.15	ENST00000343202.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	13.1969693490589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	NA	False	NA	NA	False	GATAAA	-1	NA	8169055	8108941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
transcript_14906.nic	chr11	-	781	3	ISM	ENSG00000166405.15	ENST00000528463.5	1211	7	-40	28980	-5	-591	5prime_fragment	FALSE	canonical	3	47	junction_1	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAACATCTTTA	-31	False	NA	NA	False	NA	NA	NA	8169048	8139644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_8140194_8153374_8153424_8168865
transcript_14907.known	chr11	-	1300	2	FSM	ENSG00000166405.15	ENST00000419822.2	1300	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTACTTTCTGCAGAA	-8	True	NA	NA	False	CATAAA	-42	NA	8169025	8139053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8140194_8168865
transcript_14909.nnic	chr11	-	2651	15	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_13	31.369831471186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	NA	False	NA	-7	True	AATAAA	-19	NA	8594289	8391870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8476686_8476752_8477249_8477284_8594082
transcript_1491.known	chr1	-	438	2	FSM	ENSG00000117614.10	ENST00000474160.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAAAAGAAAAAGGTT	3826	False	NA	NA	False	AAAAAG	-25	NA	25232432	25229014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25229124_25232103
transcript_14918.known	chr11	-	2558	13	FSM	ENSG00000130413.16	ENST00000396672.5	2558	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	26.371807337045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-7	True	NA	-7	True	AATAAA	-19	NA	8593956	8391870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8593743
transcript_14919.nnic	chr11	-	2541	13	NIC	ENSG00000130413.16	novel	2558	13	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_12	15.7524248574272	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	NA	False	NA	-7	True	AATAAA	-19	NA	8594278	8391870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
transcript_14921.nnic	chr11	-	2369	13	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	11	144	combination_of_known_splicesites	FALSE	canonical	3	44	junction_12	15.7524248574272	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCTTCAGTCATTCAC	NA	False	NA	NA	False	AATAAA	-22	NA	8594278	8392042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
transcript_14926.nnic	chr11	-	343	2	NNC	ENSG00000130413.16	novel	2796	16	NA	NA	11	-97754	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATTTTTCTCATCATG	NA	False	NA	NA	False	AATAAA	-19	NA	8594278	8572572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_8572720_8594082
transcript_14929.known	chr11	-	2679	19	FSM	ENSG00000166444.19	ENST00000530438.5	2679	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_17	35.2480189444197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTTCTCAGTAGCAGA	192	False	NA	NA	False	AATGAA	-23	NA	8811016	8694095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8750620_8750726_8810516
transcript_14933.known	chr11	-	769	5	FSM	ENSG00000166444.19	ENST00000532162.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	13.7908484148003	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAATATGGCAAATAT	3	True	NA	NA	False	NA	NA	NA	8699020	8693888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932
transcript_14941.known	chr11	+	651	5	FSM	ENSG00000166441.13	ENST00000534599.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2811.25207870088	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	17	True	NA	26	True	ATTAAA	-14	NA	8682791	8685845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8683862_8684082_8684717_8684893_8685677
transcript_14944.known	chr11	+	4535	5	FSM	ENSG00000166441.13	ENST00000314138.11	4535	5	0	0	0	0	multi-exon	FALSE	canonical	3	3888	junction_1	1363.25738123804	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGACTAATCCCACTTA	17	True	NA	NA	False	NA	NA	NA	8682791	8689872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677
transcript_14946.known	chr11	+	406	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	2784.95550907012	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	17	True	NA	29	True	ATTAAA	-17	NA	8682791	8685848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
transcript_14947.known	chr11	+	867	4	FSM	ENSG00000166441.13	ENST00000531978.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	3888	junction_1	1565.53526522614	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGAGGAGGCTTATGC	13	True	NA	NA	False	NA	NA	NA	8682787	8685415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717
transcript_14952.known	chr11	+	577	3	FSM	ENSG00000166441.13	ENST00000530585.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	3888	junction_1	1659.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGTGGTTTATCCT	13	True	NA	NA	False	NA	NA	NA	8682787	8684489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8684005
transcript_14954.known	chr11	+	607	2	FSM	ENSG00000166441.13	ENST00000529227.5	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	3888	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTCCTGCCTCAGCCT	13	True	NA	NA	False	NA	NA	NA	8682787	8683779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201
transcript_14955.known	chr11	+	878	4	FSM	ENSG00000166441.13	ENST00000530022.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	6431	junction_3	366.756352667847	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	35	False	NA	29	True	ATTAAA	-17	NA	8682809	8685848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8683266_8684005_8684082_8684717_8684893_8685677
transcript_14956.known	chr11	+	558	5	FSM	ENSG00000166441.13	ENST00000524496.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2812.81002735698	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	14	True	NA	28	True	ATTAAA	-16	NA	8682788	8685847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8682817_8683201_8683266_8683960_8684082_8684717_8684893_8685677
transcript_14957.known	chr11	+	297	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3596.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	200	False	NA	28	True	ATTAAA	-16	NA	8683214	8685847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8683266_8684005_8684082_8685677
transcript_14958.known	chr11	+	1273	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	80.8099003835545	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	-3	True	NA	14	True	AATAAA	-17	NA	8911188	8920079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_14960.known	chr11	+	1247	5	FSM	ENSG00000166452.12	ENST00000299576.9	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	84.8807987709824	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	17	False	NA	19	True	AATAAA	-22	NA	8911138	8920084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286_8917368_8919336
transcript_14962.known	chr11	+	1022	5	FSM	ENSG00000166452.12	ENST00000534147.5	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	70.8007768318964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCTCGTGATCCACC	155	False	NA	NA	False	NA	NA	NA	8911442	8919862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_14965.known	chr11	+	1128	4	FSM	ENSG00000166452.12	ENST00000525005.5	1128	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	69.5317673201729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAACATACACATTTGGTG	0	True	NA	NA	False	NA	NA	NA	8911191	8917748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286
transcript_14966.known	chr11	+	1084	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	61.478090044792	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGATTACAGGCGTGA	50	False	NA	NA	False	NA	NA	NA	8911337	8919900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
transcript_14968.known	chr11	+	513	3	FSM	ENSG00000166452.12	ENST00000529942.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	58	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTCTCTTAATAGCT	177	False	NA	2	True	AATAAA	-7	NA	8911464	8919537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_8911672_8914825_8914931_8919336
transcript_14969.nnic	chr11	+	1241	3	NIC	ENSG00000166452.12	novel	1273	6	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_1	126.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	7	True	NA	14	True	AATAAA	-17	NA	8911254	8920079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_8911672_8917286_8917368_8919336
transcript_14970.known	chr11	-	1844	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	22.4833271559171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-22	True	NA	79	True	TATAAA	-17	NA	8964442	8947201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
transcript_14971.known	chr11	-	1433	5	FSM	ENSG00000175348.11	ENST00000525069.5	1433	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	60.3676237730126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCTGGATTGATAATAT	NA	False	NA	3	True	AATAAA	-23	NA	8965011	8947500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964889
transcript_14976.known	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	63.1682057859982	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-21	True	NA	-13	True	AATAAA	-19	NA	8964441	8947293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
transcript_1498.nic	chr1	-	1792	6	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_2	45.017329996347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-19	True	AATAAA	-20	NA	25247499	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25243634_25244176_25244499_25245149_25245302_25246443_25247030_25247308
transcript_14980.known	chr11	-	3761	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	6.49786289653931	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	0	True	NA	-4	True	AATAAA	-19	NA	9004001	8980575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
transcript_14986.known	chr11	-	1440	8	FSM	ENSG00000166471.11	ENST00000611268.4	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	98.0112446693371	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTTGGGATTT	940	False	NA	-8	True	AATAAA	-18	NA	9314567	9280656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_14988.nnic	chr11	-	1383	7	NIC	ENSG00000166471.11	novel	1443	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	151.647343091353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-16	True	NA	-5	True	AATAAA	-21	NA	9314625	9280653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9314320
transcript_1499.nic	chr1	-	1515	6	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_2	45.017329996347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-19	True	AATAAA	-20	NA	25247499	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25243634_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_14990.nic	chr11	-	2158	7	NIC	ENSG00000166471.11	novel	1443	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	101	junction_1	104.478732551441	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-38	True	NA	-5	True	AATAAA	-21	NA	9314647	9280653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9288536_9295258_9295388_9299583_9299702_9314320
transcript_14991.known	chr11	-	3798	7	FSM	ENSG00000166471.11	ENST00000528080.6	3798	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	18.7409237291608	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	16	True	NA	-5	True	AATAAA	-21	NA	9314593	9280653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_14992.nnic	chr11	-	1296	7	NIC	ENSG00000166471.11	novel	1443	8	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	138.934037106343	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTCACATTTGGGATT	-38	True	NA	-9	True	AATAAA	-17	NA	9314647	9280657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_9281042_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_14997.known	chr11	-	723	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTGCTGAACTAATT	-24	True	NA	NA	False	ATTAAA	-40	NA	9314633	9295095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9295388_9299583_9299702_9314320
transcript_15.known	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00043_+_0_1000
transcript_150.known	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_1	13939	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_1382_1468_1535_1640
transcript_1500.nic	chr1	-	2106	6	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	-42	0	intron_retention	FALSE	canonical	3	6	junction_2	43.116586135732	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-19	True	AATAAA	-20	NA	25247499	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_15000.known	chr11	+	6162	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.3988506365573	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	9	True	NA	13	True	AATAAA	-22	NA	9384651	9448127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
transcript_15005.nic	chr11	+	1445	12	ISM	ENSG00000205339.10	ENST00000379719.8	6162	25	-46	22913	-46	-110	5prime_fragment	TRUE	canonical	0	0	junction_2	52.3263756319589	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGCCCTGCATATGAT	0	True	NA	-32	True	NA	NA	NA	9384605	9425214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145
transcript_1501.nic	chr1	-	2217	6	NIC	ENSG00000117616.18	novel	2013	5	NA	NA	-42	0	intron_retention	FALSE	canonical	3	6	junction_1	43.116586135732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	NA	False	NA	-25	True	AATAAA	-14	NA	25247499	25242254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242427_25242538_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_15010.known	chr11	+	2900	16	FSM	ENSG00000166478.10	ENST00000396602.7	2900	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	20.1732496142788	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	-7	True	NA	20	True	AATACA	-19	NA	9461011	9528524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_15014.known	chr11	+	2022	16	FSM	ENSG00000166478.10	ENST00000530463.5	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	32.3820251923124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCAGAACAATGGAGCAA	-5	True	NA	NA	False	NA	NA	NA	9460975	9527613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_15020.nnic	chr11	+	2289	15	NIC	ENSG00000166478.10	novel	2900	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_10	46.5935530269314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCCCCAGTTAGTAGA	NA	False	NA	4	True	AATAAA	-18	NA	9460972	9528054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_15024.known	chr11	+	1954	15	FSM	ENSG00000166478.10	ENST00000396597.7	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	48.5495749156447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTCATCTTCTGGCAGC	6	False	NA	NA	False	AATAAA	-10	NA	9460986	9527646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9461077_9471301_9471421_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_15030.known	chr11	-	1147	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGGATTACTGTTTTTTG	NA	False	NA	-6	True	AATAAA	-14	NA	9460702	9459555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_9459600_9460700
transcript_15031.known	chr11	+	4884	12	FSM	ENSG00000133789.15	ENST00000318950.11	4884	12	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	54.2234434371501	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGTATCTATGTGTA	-32	True	NA	53	True	AATAAA	-16	NA	9664076	9752993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_15039.known	chr11	+	3538	11	FSM	ENSG00000133789.15	ENST00000447399.6	3538	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	129.60339501726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGTTGCCTTTATAA	-32	True	NA	-13	True	AATAAA	-19	NA	9664076	9751821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9664279_9694145_9694287_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_15041.known	chr11	+	3006	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_6	46.0487174088486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTACTTGGGAGGC	26	True	NA	NA	False	TTTAAA	-13	NA	9664134	9741953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
transcript_15047.nnic	chr11	-	1280	6	FSM	ENSG00000133812.18	ENST00000533661.2	894	6	-346	-40	-346	0	multi-exon	FALSE	canonical	3	13	junction_1	61.8921642859579	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCTTGGGTAAATTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	10044961	10016420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10016780_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
transcript_15048.known	chr11	+	1492	4	FSM	ENSG00000148926.10	ENST00000278175.10	1492	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	20.9814733091416	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	-2	True	NA	34	True	AATAAA	-16	NA	10305072	10307397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331
transcript_15049.known	chr11	+	1839	2	FSM	ENSG00000148926.10	ENST00000530439.1	1839	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAACAGCAAACCAATAAA	-1	True	NA	-1	True	CATAAA	-12	NA	10305073	10307362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10305230_10305679
transcript_1505.known	chr1	-	1425	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	40.7208484685671	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	0	True	NA	-19	True	AATAAA	-20	NA	25247454	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
transcript_15050.nic	chr11	-	3978	7	NIC	ENSG00000110315.7	novel	4049	6	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	166.676749694998	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGCTAATTGAAGAGAT	12	True	NA	-33	True	AATAAA	-18	NA	10541187	10511932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10531826_10532016_10534015_10534206_10541121
transcript_15051.known	chr11	-	4049	6	FSM	ENSG00000110315.7	ENST00000265981.7	4049	6	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	21.1319663069957	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTAACTGCTAT	12	True	NA	-17	True	ATTAAA	-16	NA	10541187	10511672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_15055.known	chr11	+	4330	25	FSM	ENSG00000198730.9	ENST00000361367.7	4330	25	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_11	21.0474002089464	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	14	True	NA	10	True	AATAAA	-18	NA	10751245	10779746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
transcript_15060.nic	chr11	+	3195	22	ISM	ENSG00000198730.9	ENST00000361367.7	4330	25	-227	5661	-227	-224	5prime_fragment	FALSE	canonical	3	202	junction_11	22.2937510946113	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAGAAGAAAGGGTA	1	True	NA	NA	False	NA	NA	NA	10751018	10774085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011
transcript_15065.known	chr11	-	4001	22	FSM	ENSG00000110321.19	ENST00000526148.6	4001	22	0	0	0	0	multi-exon	TRUE	canonical	1	41	junction_21	1463.11589508452	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGTGGCTGTAAATG	1014	False	NA	-4	True	AATAAA	-20	NA	10807973	10797049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10807548
transcript_15066.known	chr11	-	3794	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	0	0	0	multi-exon	FALSE	canonical	3	5830	junction_4	473.615404120694	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	5	True	NA	-8	True	AATAAA	-16	NA	10808926	10797053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_1507.known	chr1	-	2013	5	FSM	ENSG00000117616.18	ENST00000568254.5	2013	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	46.1546314035764	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-3	True	NA	-25	True	AATAAA	-14	NA	25247457	25242254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25244225_25245149_25245302_25246443_25247030_25247308
transcript_15070.nic	chr11	+	3144	21	ISM	ENSG00000198730.9	ENST00000361367.7	4330	25	-280	6503	-280	-1066	5prime_fragment	TRUE	canonical	3	202	junction_11	21.8230955641036	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAAAAGAGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	10750965	10773243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126
transcript_15076.known	chr11	-	3346	21	FSM	ENSG00000110321.19	ENST00000396525.7	3346	21	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_8	1296.88493707036	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	279	False	NA	-74	True	NA	NA	NA	10808708	10797169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_1508.nic	chr1	-	2335	5	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-42	0	intron_retention	FALSE	canonical	3	42	junction_2	30.0697106736995	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-19	True	AATAAA	-20	NA	25247499	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_15087.known	chr11	-	523	2	FSM	ENSG00000110321.19	ENST00000534246.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	6053	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTCCGAGTTCAGTC	12	True	NA	NA	False	AATAAA	-23	NA	10808919	10807073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10807382_10808704
transcript_15088.known	chr11	+	1153	3	FSM	ENSG00000247271.8	ENST00000664276.1	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGCTTTTTTTTTGTTT	NA	False	NA	19	True	AATAAA	-26	NA	10858178	10879278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10858367_10865260_10865328_10878380
transcript_15089.known	chr11	-	2741	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	52.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATTATTGGTATTT	-14	False	NA	1	True	TTTAAA	-5	NA	10858073	10852703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10855119_10856143_10856258_10857861
transcript_1509.nic	chr1	-	2320	5	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_4	47.3042017161267	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-19	True	AATAAA	-20	NA	25267915	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25267739
transcript_15090.known	chr11	-	1512	3	FSM	ENSG00000236287.8	ENST00000526020.5	1512	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	57	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAAGTTATTTGTC	NA	False	NA	NA	False	AGTAAA	-19	NA	10858796	10854618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_10855082_10856143_10856258_10857861
transcript_15094.known	chr11	+	1040	2	FSM	ENSG00000247271.8	ENST00000664153.2	1042	2	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	-3	True	NA	13	True	AATAAA	-20	NA	10858218	10879272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10858367_10878380
transcript_15095.known	chr11	+	1094	3	FSM	ENSG00000247271.8	ENST00000501079.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	-5	True	NA	13	True	AATAAA	-20	NA	10858216	10879272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_10858352_10865260_10865328_10878380
transcript_15097.known	chr11	+	9994	28	FSM	ENSG00000170242.19	ENST00000527733.7	9994	28	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_11	25.5726727430054	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTCACTCAGGACTGA	-20	True	NA	NA	False	NA	NA	NA	11841971	11961887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
transcript_1510.nic	chr1	-	2868	5	NIC	ENSG00000117616.18	novel	2013	5	NA	NA	-42	0	intron_retention	FALSE	canonical	3	6	junction_1	44.8964085423322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	NA	False	NA	-25	True	AATAAA	-14	NA	25247499	25242254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_25242427_25242538_25242706_25243549_25245302_25246443_25247030_25247308
transcript_15102.known	chr11	-	2525	7	FSM	ENSG00000050165.19	ENST00000683431.1	2525	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	14.3265487818944	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAATAGAAACAACCTGT	-16	True	NA	63	True	AATAAA	-26	NA	12008626	11963035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369
transcript_15104.known	chr11	+	8627	13	FSM	ENSG00000197702.14	ENST00000334956.15	8627	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	8.21034239372648	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTTTCTCTCCCAT	-11	True	NA	38	True	ATTAAA	-45	NA	12377570	12535356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846_12477950_12496457_12496599_12504313_12504430_12508583_12508643_12511513_12511534_12513298_12513361_12513996_12514066_12517609_12517712_12518444_12518518_12527848
transcript_1511.known	chr1	-	2941	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	13.0724477007517	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	0	True	NA	-19	True	AATAAA	-20	NA	25247454	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
transcript_15111.known	chr11	-	2439	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	54.4149278691059	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAACCACATTGACCAG	12	True	NA	-18	True	AATAAA	-30	NA	13463222	13388007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
transcript_15113.known	chr11	-	1662	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_7	22.0611395342811	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTTTTAAAGACCAAAG	-63	True	NA	NA	False	NA	NA	NA	13463297	13388701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
transcript_15114.known	chr11	+	5266	12	FSM	ENSG00000197601.13	ENST00000354817.8	5266	12	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_6	32.450852858433	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	-8	True	NA	21	True	ATTAAA	-22	NA	13668667	13732346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965_13713034_13714508_13714681_13721729_13721860_13727555_13727684_13728611
transcript_15129.nnic	chr11	-	1984	6	NNC	ENSG00000133818.14	novel	2343	6	NA	NA	1273	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_5	436.583371190429	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	NA	False	NA	-16	True	ATTAAA	-19	NA	14340821	14277921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14340759
transcript_1513.known	chr1	-	970	2	FSM	ENSG00000117616.18	ENST00000450820.2	970	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGGTGAAACCCCTTC	NA	False	NA	NA	False	NA	NA	NA	25267885	25253113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25253938_25267739
transcript_15131.known	chr11	-	732	6	FSM	ENSG00000133818.14	ENST00000531807.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_5	366.437661819852	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAGAACCAACACGGAA	NA	False	NA	NA	False	NA	NA	NA	14342094	14279396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14341809
transcript_15132.known	chr11	-	2343	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_5	142.34240408255	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-28	True	NA	-16	True	ATTAAA	-19	NA	14359183	14277921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
transcript_1514.known	chr1	-	901	3	FSM	ENSG00000117616.18	ENST00000569495.5	901	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	58	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	3383	False	NA	-19	True	AATAAA	-20	NA	25244105	25242248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242427_25242538_25242706_25243549
transcript_15147.nic	chr11	-	1625	10	NIC	ENSG00000129084.18	novel	1195	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	49	junction_9	472.152700764812	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-24	True	NA	-2	True	AATAAA	-20	NA	14520392	14504875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519872
transcript_15148.known	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	455.314055228794	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	5	True	NA	-39	True	NA	NA	NA	14520363	14504912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
transcript_15149.nic	chr11	-	1269	10	NIC	ENSG00000129084.18	novel	1195	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	58	junction_9	469.395066436644	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	12	True	NA	-2	True	AATAAA	-20	NA	14520356	14504875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520192
transcript_1515.known	chr1	-	3034	6	FSM	ENSG00000117616.18	ENST00000473314.6	3034	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.5711380136931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAGTCTTTATTGTAT	192	False	NA	-26	True	AATAAA	-13	NA	25338165	25242255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25337039
transcript_15150.known	chr11	-	1195	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	0	0	0	multi-exon	FALSE	canonical	3	1328	junction_9	119.88420338903	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-18	True	NA	-2	True	AATAAA	-20	NA	14520386	14504875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
transcript_1516.known	chr1	-	824	5	FSM	ENSG00000117616.18	ENST00000566395.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.3374857486678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	953	False	NA	-25	True	AATAAA	-14	NA	25246535	25242254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25242706_25243549_25243634_25244453_25244499_25245149_25245302_25246443
transcript_15165.nic	chr11	-	1726	9	NIC	ENSG00000129084.18	novel	1195	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1328	junction_8	120.742429886929	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	30	False	14520419	-2	True	AATAAA	-20	NA	14520402	14504875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
transcript_15174.known	chr11	-	479	2	FSM	ENSG00000129084.18	ENST00000528018.1	479	2	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGCTAGAAAACAAAAAGAG	14	True	NA	NA	False	AAAACA	-36	NA	14643635	14610853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14611152_14643454
transcript_15178.nic	chr11	-	3491	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_21	108.068971006164	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-10	True	NA	-15	True	AATAAA	-17	NA	14499862	14457511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499602
transcript_15179.known	chr11	-	3481	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_21	110.629860283716	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAATGGATTTCTTTTAG	0	True	NA	-9	True	AATAAA	-23	NA	14499852	14457505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
transcript_15180.known	chr11	-	3336	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_21	68.5896139906932	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	0	True	NA	-15	True	AATAAA	-17	NA	14499811	14457511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_15181.nic	chr11	-	3366	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_21	96.8432588260296	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	8684	False	NA	-15	True	AATAAA	-17	NA	14499876	14457511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_15188.nic	chr11	-	2194	15	ISM	ENSG00000129083.13	ENST00000439561.7	3336	22	-68	11825	-17	4673	5prime_fragment	FALSE	canonical	3	306	junction_14	52.5635184266403	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGGTATATATGATGAG	8681	False	NA	-1	True	NA	NA	NA	14499879	14469336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_15189.nic	chr11	-	2156	15	NIC	ENSG00000129083.13	novel	3481	22	NA	NA	-14	4673	combination_of_known_junctions	FALSE	canonical	3	121	junction_14	94.00412496377	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGGTATATATGATGAG	8684	False	NA	-1	True	NA	NA	NA	14499876	14469336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_1519.known	chr1	+	965	5	FSM	ENSG00000183726.11	ENST00000491936.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	462.020291762169	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCATGGTCCAGCCAC	-2	True	NA	NA	False	NA	NA	NA	25338319	25361265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25338457_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_15195.nnic	chr11	-	1963	6	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	22.6415547169359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-18	True	NA	NA	False	AATAAA	-24	NA	14891683	14878008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431_14890470_14891152
transcript_15198.known	chr11	-	1668	5	FSM	ENSG00000186104.11	ENST00000534686.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	19.8667435680838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	3	True	NA	NA	False	AATAAA	-24	NA	14891662	14878008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14891152
transcript_15200.nic	chr11	-	3174	5	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	20	0	intron_retention	FALSE	canonical	3	17	junction_4	17.6847391838274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	17	False	NA	NA	False	AATAAA	-24	NA	14892211	14878008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431
transcript_15201.known	chr11	-	1882	5	FSM	ENSG00000186104.11	ENST00000530609.5	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	14.9059551857638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	588	False	NA	NA	False	AATAAA	-24	NA	14891640	14878008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891152
transcript_15206.known	chr11	+	1044	5	FSM	ENSG00000175868.14	ENST00000324229.11	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1.92028643696715	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	-1	True	NA	10	True	AATAAA	-20	NA	15073592	15078637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15078082
transcript_15207.nic	chr11	-	1034	5	NIC	ENSG00000110680.13	novel	851	4	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1.58113883008419	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCTCTGCTGCTATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	14972427	14966667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_14967102_14967673_14967855_14969934_14970076_14971106_14971202_14972244
transcript_15209.nnic	chr11	+	915	4	NIC	ENSG00000254946.2	novel	743	3	NA	NA	-172	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	12.3558353285671	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGGAAGGAATGGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	15552682	15604169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_15552914_15561877_15562229_15585707_15585803_15603931
transcript_15222.known	chr11	+	3920	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	0	0	0	0	multi-exon	FALSE	canonical	3	2521	junction_3	127.779839959205	3085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTGCCCATTACC	-3	True	NA	20	True	AGTAAA	-17	NA	16738646	16758340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
transcript_15226.known	chr11	+	575	4	FSM	ENSG00000110696.10	ENST00000525684.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1290.31710142206	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAATGATGTTTGTTA	8	True	NA	-65	True	AAAAAG	-14	NA	16738657	16755067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_16738842_16744600_16744685_16752784_16752895_16754870
transcript_15227.known	chr11	+	762	3	FSM	ENSG00000110696.10	ENST00000525256.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2526	junction_2	150	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTAGCCTGGTGTGGTG	9	True	NA	NA	False	ACTAAA	-16	NA	16738658	16748591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_16738842_16744600_16744685_16748096
transcript_15229.known	chr11	-	321	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5553	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	27	False	NA	-67	True	NA	NA	NA	16975013	16974692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_16974700_16975000
transcript_1523.known	chr1	+	2266	7	FSM	ENSG00000183726.11	ENST00000374358.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_5	90.4537942205239	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTCTTTAATTTTT	12	True	NA	29	True	ATTAAA	-17	NA	25338333	25362361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_15230.known	chr11	+	1290	2	FSM	ENSG00000184669.10	ENST00000530490.3	1332	2	0	42	0	-25	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTGCGGCGCCTGCA	15	False	NA	NA	False	ATTAAA	-1	NA	17013997	17052951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_17014368_17052031
transcript_15236.known	chr11	-	491	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	5976.52081398534	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	3	True	NA	-15	True	AATAAA	-19	NA	17077666	17074388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
transcript_15239.known	chr11	-	561	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	6260.93088925281	18641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17077706	17074388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
transcript_1524.known	chr1	+	776	6	FSM	ENSG00000183726.11	ENST00000498135.5	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	414.450769090854	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGAAATTACA	-5	True	NA	-22	True	NA	NA	NA	25338316	25360967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25338457_25340473_25340580_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_1525.known	chr1	+	3940	11	FSM	ENSG00000204178.11	ENST00000374343.5	3940	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	11.1193524991341	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTTCTGCCTTTTTAA	-5	True	NA	NA	False	AATAAA	-20	NA	25430896	25500209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25431179_25446761_25446904_25448807_25448935_25454258_25454383_25456652_25456832_25458390_25458893_25484115_25484275_25485612_25485796_25489172_25489294_25491409_25491585_25498263
transcript_15250.known	chr11	-	664	5	FSM	ENSG00000110700.7	ENST00000525828.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	11387	junction_1	2145.8143413399	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTTTCATATTTA	1	True	NA	-19	True	AATAAA	-15	NA	17077668	17074392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
transcript_15251.nic	chr11	-	1802	5	ISM	ENSG00000011405.14	ENST00000533645.1	2101	6	-39	7195	0	-7195	5prime_fragment	FALSE	canonical	3	295	junction_2	17.7112252540585	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTAAGATGTCATGT	-19	True	NA	NA	False	AATAAA	-17	NA	17207986	17148516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
transcript_15255.nic	chr11	+	1743	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-39	1	combination_of_known_junctions	TRUE	canonical	3	46	junction_3	124.534807854459	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	274	False	NA	NA	False	AATAAA	-14	NA	17276691	17331523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17276829_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15266.known	chr11	+	2300	14	FSM	ENSG00000070081.18	ENST00000529010.6	2300	14	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	38.5838056595199	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGGGGAAGGCAAGAAA	10	True	NA	NA	False	NA	NA	NA	17276738	17332211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15269.nic	chr11	+	1635	14	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	108.257199768769	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	7	True	NA	NA	False	AATAAA	-14	NA	17276735	17331523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17276849_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15271.nic	chr11	+	1651	14	NIC	ENSG00000070081.18	novel	937	8	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	110.257149669554	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	166	False	NA	NA	False	AATAAA	-14	NA	17276966	17331523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17277096_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_15273.known	chr11	+	1905	13	FSM	ENSG00000070081.18	ENST00000323688.10	1905	13	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	37.4265948223987	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTTTTTTCCAACA	12	True	NA	NA	False	AATAAA	-24	NA	17276740	17331390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901
transcript_15275.nic	chr11	+	1569	13	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-39	1	combination_of_known_junctions	FALSE	canonical	3	58	junction_10	101.632781238251	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	274	False	NA	NA	False	AATAAA	-14	NA	17276691	17331523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17330126_17330298_17330901_17330984_17331411
transcript_1528.known	chr1	+	1953	7	FSM	ENSG00000117640.18	ENST00000374303.7	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	25.0826411864638	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	-17	True	NA	13	True	ATTAAA	-21	NA	25819953	25832938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_15284.nic	chr11	+	888	7	ISM	ENSG00000070081.18	ENST00000323688.10	1905	13	-49	20453	-39	0	5prime_fragment	FALSE	canonical	3	349	junction_2	31.8154399973067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAGAAGAAGAGTCTA	274	False	NA	76	True	AAGAAA	-2	NA	17276691	17310937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824
transcript_15287.known	chr11	+	472	2	FSM	ENSG00000287898.1	ENST00000666786.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTCATGGAGTTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	17476930	17492367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_17477055_17492019
transcript_15288.known	chr11	-	2149	20	FSM	ENSG00000006611.17	ENST00000526313.5	2149	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.01886955783158	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTGAGTGTGGATTTG	17	False	NA	1	True	AATAAA	-22	NA	17544402	17493894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_15299.nic	chr11	-	1525	12	NIC	ENSG00000129158.11	novel	1525	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_10	48.0624593627917	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-31	True	NA	-8	True	AATAAA	-20	NA	18012952	17788047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
transcript_153.known	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_-_1500_1800
transcript_1530.known	chr1	+	1868	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	83.9880943943843	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	32	True	NA	13	True	ATTAAA	-21	NA	25820002	25832938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
transcript_15304.nic	chr11	-	1460	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_10	35.4639253326532	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-35	True	NA	-8	True	AATAAA	-20	NA	18012956	17788047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_15305.known	chr11	-	1451	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	35.4639253326532	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-19	True	NA	-8	True	AATAAA	-20	NA	18013047	17788047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_1531.known	chr1	+	1873	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	82.8869712319132	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCCATCTCTTG	3486	False	NA	17	True	ATTAAA	-25	NA	25819928	25832942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
transcript_15311.known	chr11	-	1314	11	FSM	ENSG00000129158.11	ENST00000527494.5	1314	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	63.8357266740185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	23	True	NA	-8	True	AATAAA	-20	NA	18012898	17788047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_17999493_17999573_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_15314.nic	chr11	-	1358	11	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	52.8673812477978	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-31	True	NA	-8	True	AATAAA	-20	NA	18012952	17788047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
transcript_15320.nic	chr11	-	1293	10	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	41.5222683078863	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-35	True	NA	-8	True	AATAAA	-20	NA	18012956	17788047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_15321.known	chr11	-	1264	10	FSM	ENSG00000129158.11	ENST00000528200.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	41.5222683078863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCCCAGAGAATTGTT	0	True	NA	-9	True	AATAAA	-19	NA	18013028	17788048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_15332.known	chr11	-	1526	12	FSM	ENSG00000166788.10	ENST00000531581.5	1526	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	161.166768512393	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAAATTGACTTATTG	-19	True	NA	-9	True	AATAAA	-19	NA	18106087	18080344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086861_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_15338.nic	chr11	-	1353	11	NIC	ENSG00000166788.10	novel	1518	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	167.926888853453	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAATTGACTTATTGG	NA	False	NA	-8	True	AATAAA	-20	NA	18106111	18080343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_15342.known	chr11	+	518	4	FSM	ENSG00000173432.13	ENST00000356524.9	518	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGAAACTGGGTGTTA	1	True	NA	NA	False	AATAAA	-17	NA	18266263	18269967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18266297_18266883_18266979_18269194_18269334_18269716
transcript_15343.known	chr11	-	4840	23	FSM	ENSG00000110756.18	ENST00000349215.8	4840	23	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_22	18.9808515950346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAACTCTTTTTTGCA	8	True	NA	-6	True	AGTAAA	-18	NA	18322140	18278675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18321945
transcript_15346.known	chr11	-	4147	22	FSM	ENSG00000110756.18	ENST00000438420.6	4147	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	19.5792476560135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAATATTTTTCCCT	278	False	NA	-22	True	AATAAA	-25	NA	18322174	18279058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18322132
transcript_15347.nic	chr11	-	2389	16	ISM	ENSG00000110756.18	ENST00000349215.8	4840	23	-68	13129	-10	-3914	5prime_fragment	FALSE	canonical	3	25	junction_15	21.8493834136242	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTCTTTAGGCAATGAA	-8	True	NA	21	True	AAAAAG	-35	NA	18322208	18291804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18321945
transcript_15348.nic	chr11	-	2088	15	NIC	ENSG00000110756.18	novel	4725	22	NA	NA	3	-3914	combination_of_known_junctions	FALSE	canonical	3	16	junction_14	22.161743098025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTCTTTAGGCAATGAA	5	True	NA	21	True	AAAAAG	-35	NA	18322195	18291804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18322076
transcript_15354.known	chr11	+	3012	15	FSM	ENSG00000110768.12	ENST00000265963.9	3012	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_14	22.1899269296421	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGGTTTCTCATT	-4	True	NA	34	True	AGTAAA	-30	NA	18322566	18367045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_15359.nic	chr11	+	1890	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-299	12512	-37	-573	5prime_fragment	FALSE	canonical	3	112	junction_5	17.6984286025624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTTTCATGTATATGA	-30	True	NA	NA	False	AATAAA	-35	NA	18322257	18348258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
transcript_15361.nic	chr11	+	2463	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-299	11939	-37	0	5prime_fragment	FALSE	canonical	3	112	junction_5	17.6984286025624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAATTTCTTTCATTTA	-30	True	NA	3	True	AATAAA	-15	NA	18322257	18348831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
transcript_15362.nic	chr11	+	1519	7	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-299	18979	-37	-167	5prime_fragment	FALSE	canonical	3	112	junction_5	19.8578280114753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCCTGTGTGAGTTG	-30	True	NA	NA	False	ATTAAA	-16	NA	18322257	18341791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527
transcript_15363.nic	chr11	+	751	4	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	10	22447	0	2419	5prime_fragment	FALSE	canonical	3	147	junction_1	6.18241233033047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTCTTAAGACCATTA	-4	True	NA	NA	False	AATAAA	-15	NA	18322566	18338323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108
transcript_15365.known	chr11	+	2241	8	FSM	ENSG00000134333.14	ENST00000422447.8	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	3357	junction_1	385.985724595919	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGCCTGAAAACCATAC	-1	True	NA	NA	False	AATACA	-14	NA	18394562	18408425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15366.known	chr11	+	1922	8	FSM	ENSG00000134333.14	ENST00000379412.9	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1449.11992996735	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGGTTAATTCATTA	1683	False	NA	29	True	AATAAA	-14	NA	18396277	18407847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15367.known	chr11	+	1310	7	FSM	ENSG00000134333.14	ENST00000430553.6	1310	7	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_3	1575.41970598314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCAGTGTATAAATCCA	-2	True	NA	-10	True	NA	NA	NA	18394561	18407667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15369.known	chr11	+	1340	7	FSM	ENSG00000134333.14	ENST00000545215.5	1340	7	0	0	0	0	multi-exon	FALSE	canonical	2	143	junction_2	1508.50537692851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCCCAGTGAGTCACA	-1	True	NA	-35	True	NA	NA	NA	18394562	18407642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18394637_18396818_18396969_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_15370.known	chr11	+	2035	8	FSM	ENSG00000166796.12	ENST00000541669.6	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	5.34522483824849	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATTTGGTGTCTCAA	-14	True	NA	NA	False	TATAAA	-7	NA	18412317	18452063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_15372.nic	chr11	+	1110	7	NIC	ENSG00000166796.12	novel	2035	8	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	6.58280588604383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	-33	True	NA	NA	False	AATAAA	-18	NA	18412298	18451243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18450962
transcript_15373.known	chr11	+	1092	7	FSM	ENSG00000166796.12	ENST00000396215.7	1092	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.06320670013903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	-9	True	NA	NA	False	AATAAA	-18	NA	18412322	18451243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_15378.nic	chr11	-	1571	11	NIC	ENSG00000074319.13	novel	1534	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	275.091257585551	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-21	True	NA	-15	True	AATAAA	-14	NA	18526937	18480310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18525660_18525703_18526774
transcript_15380.known	chr11	-	1534	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	32.6330136556052	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-26	True	NA	-15	True	AATAAA	-14	NA	18526942	18480310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
transcript_15382.nic	chr11	-	1444	9	NIC	ENSG00000074319.13	novel	1534	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	230.591494856163	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-21	True	NA	-15	True	AATAAA	-14	NA	18526937	18480310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18526774
transcript_15387.known	chr11	-	4207	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	8.86258735051196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGATGCTTCATTTAT	0	True	NA	-2	True	AATAAA	-16	NA	18588734	18529608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_1539.known	chr1	-	1392	4	FSM	ENSG00000127423.11	ENST00000538789.5	1392	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	92.5718939827611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAATAGCTTGAGTACT	-50	True	NA	NA	False	AATAAA	-18	NA	25859458	25831912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25832159_25835021_25835847_25837412_25837555_25859279
transcript_15394.known	chr11	-	1848	11	FSM	ENSG00000151116.17	ENST00000379387.8	1848	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	16.4404987758888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTAATGTTTCTTGTG	6	True	NA	NA	False	NA	NA	NA	18588706	18531873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_15395.known	chr11	-	1354	11	FSM	ENSG00000151116.17	ENST00000396196.6	1354	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	16.4258941917936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAGTCATTTAATTTT	-5	True	NA	NA	False	NA	NA	NA	18588717	18532280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18575346_18575413_18578723_18578809_18588612
transcript_15397.nnic	chr11	-	2089	11	NIC	ENSG00000151116.17	novel	4207	12	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.7316101919707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCATAACCTCTTCCTG	NA	False	NA	20	True	ATTAAA	-39	NA	18588748	18531676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_18532488_18534329_18534454_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_15399.known	chr11	-	2503	11	FSM	ENSG00000151116.17	ENST00000543987.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	16.7275222313408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTATTAAGGGGCACTT	NA	False	NA	NA	False	TATAAA	-31	NA	18588746	18531200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_154.known	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_-_2400_2500
transcript_1540.known	chr1	-	2161	3	FSM	ENSG00000127423.11	ENST00000374298.4	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGTGATAATTGGTAA	-49	True	NA	-12	True	AATAAA	-14	NA	25859457	25834005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25835847_25837412_25837555_25859279
transcript_15401.known	chr11	-	995	7	FSM	ENSG00000151116.17	ENST00000300038.7	995	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	19.6079632349263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTTTTCTCATCTG	-2	True	NA	-3	True	AATAAA	-21	NA	18588681	18563645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18564002_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_15404.known	chr11	-	5601	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	8.11418511004032	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTGGTTTGCATT	1	True	NA	-7	True	ATTAAA	-14	NA	18634342	18606402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
transcript_15406.nnic	chr11	+	387	3	NIC	ENSG00000247595.5	novel	493	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	-30	True	NA	26	True	CATAAA	-15	NA	18588758	18603883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_18588996_18603157_18603196_18603771
transcript_15407.known	chr11	-	2167	4	FSM	ENSG00000179119.15	ENST00000536336.5	2167	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	6.68331255192114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCACTAAATATTTTAT	-12	True	NA	NA	False	AATAAA	-9	NA	18634389	18612164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_18612489_18614562_18616099_18616874_18616990_18634197
transcript_15408.known	chr11	+	3607	3	FSM	ENSG00000151117.9	ENST00000280734.3	3607	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGGTAGCTTACTA	0	True	NA	NA	False	TATAAA	-18	NA	18698778	18704785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_18698908_18700932_18701198_18701572
transcript_15417.known	chr11	+	2406	17	FSM	ENSG00000177054.14	ENST00000446113.7	2406	17	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	61.416832739486	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	13	True	NA	13	True	AATAAA	-16	NA	19117167	19176415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_1542.known	chr1	-	2685	3	FSM	ENSG00000182749.6	ENST00000675840.1	2685	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTTGTCTCC	-3	True	NA	-2	True	AATAAA	-19	NA	25875708	25861483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25863862_25870608_25870695_25875487
transcript_15422.known	chr11	+	2283	16	FSM	ENSG00000177054.14	ENST00000399351.7	2283	16	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	75.8335604392204	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	-10	True	NA	13	True	AATAAA	-16	NA	19117144	19176415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_15425.nnic	chr11	+	2332	16	NIC	ENSG00000177054.14	novel	2406	17	NA	NA	17	0	combination_of_known_splicesites	TRUE	canonical	2	7	junction_7	95.3924292360539	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	NA	False	NA	13	True	AATAAA	-16	NA	19117115	19176415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_15432.known	chr11	-	3519	13	FSM	ENSG00000129173.13	ENST00000620009.4	3519	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	13.6798716693136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAGCATTTTCATTTC	1	True	NA	NA	False	ATTAAA	-14	NA	19241620	19224065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241406
transcript_15433.known	chr11	-	3432	13	FSM	ENSG00000129173.13	ENST00000527884.5	3432	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	9.90335240657874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	1	True	NA	NA	False	ATTAAA	-17	NA	19241620	19224062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
transcript_15436.known	chr11	+	886	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	120.980990242269	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGATGGTGCTCTGCA	-18	True	NA	-90	True	NA	NA	NA	20363722	20383334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_15438.known	chr11	+	967	6	FSM	ENSG00000109854.14	ENST00000443524.6	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	132.495131986047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTATACATATAGATC	-16	True	NA	-56	True	AAGAAA	-30	NA	20363724	20383368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20363799_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_1544.known	chr1	-	867	5	FSM	ENSG00000117632.23	ENST00000374291.5	867	5	0	0	0	0	multi-exon	FALSE	canonical	2	102	junction_4	1640.37227101046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTAGTACTGTATTG	-7	True	NA	38	True	NA	NA	NA	25905128	25900740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905048
transcript_15444.known	chr11	+	713	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	160	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	NA	False	NA	-1	True	AGTAAA	-36	NA	20363684	20367625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20363750_20364236_20364433_20367173
transcript_15446.known	chr11	+	774	2	FSM	ENSG00000109854.14	ENST00000532081.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTCTCACTTGAGTG	-25	True	NA	29	True	AATAAA	-17	NA	20364140	20367655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20364433_20367173
transcript_15448.known	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	32.2981939639562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	-1	True	NA	80	True	AATAAA	-19	NA	20387715	20509338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_1545.known	chr1	-	1712	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	1576.91904912713	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTGAAATGACTAA	852	False	NA	-45	True	AATAAA	-21	NA	25906153	25900117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
transcript_15453.known	chr11	+	2530	15	FSM	ENSG00000185238.13	ENST00000330796.9	2530	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	86.3912847550762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAAAAGTTTTC	-14	True	NA	36	True	AATAAA	-43	NA	20387557	20509294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_20387775_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_15454.known	chr11	+	895	1	FSM	ENSG00000148935.12	ENST00000648096.1	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGAACAAAATTTTAC	303	False	NA	NA	False	AATAAA	-23	NA	22625508	22626403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_22625500_22626400
transcript_15456.nnic	chr11	+	1556	2	NNC	ENSG00000246225.7	novel	2800	4	NA	NA	91711	159428	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTTGTATGATAGCGT	NA	False	NA	NA	False	ATTAAA	-6	NA	22921164	23104821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_22921254_23103354
transcript_15459.known	chr11	-	4479	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	11.8415464455544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTATGTTTTTGG	0	True	NA	NA	False	AATAAA	-17	NA	22829801	22818926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
transcript_15465.nic	chr11	-	295	3	ISM	ENSG00000198168.9	ENST00000354193.5	4479	4	-61	8318	-61	0	5prime_fragment	FALSE	canonical	3	257	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTACATCCGGGCCCCCA	NA	False	NA	NA	False	AATAGA	-9	NA	22829862	22827244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_22827321_22827823_22827875_22829694
transcript_15467.known	chr11	-	6285	15	FSM	ENSG00000148942.15	ENST00000396005.8	6285	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	3.51744921492718	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAATGGGTAGATTTTA	-2	True	NA	NA	False	AATAAA	-25	NA	26722060	26667019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_26671252_26673401_26673530_26678711_26678816_26681054_26681222_26683756_26683844_26686476_26686545_26692488_26692602_26697163_26697253_26698405_26698536_26703530_26703672_26703792_26703948_26709311_26709380_26711306_26711359_26712640_26712707_26721375
transcript_15469.known	chr11	+	2976	1	FSM	ENSG00000176971.4	ENST00000318627.4	2976	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTAGTTTGAAGTCAC	-6	True	NA	NA	False	AATAAA	-20	NA	26994111	26997087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_26994100_26997100
transcript_15471.known	chr11	-	879	5	FSM	ENSG00000254560.6	ENST00000530430.1	879	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.69740215917033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTATGCTGGTCCATC	NA	False	NA	NA	False	NA	NA	NA	27220086	27063019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27063061_27066491_27066663_27151049_27151153_27217316_27217481_27219686
transcript_15477.nnic	chr11	-	969	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-44	80	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	-21	True	ATTAAA	-15	NA	27220157	27217040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27217481_27218658_27218717_27219686
transcript_15478.nnic	chr11	-	1102	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-40	80	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	-21	True	ATTAAA	-15	NA	27220153	27217040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27217481_27218658_27218854_27219686
transcript_15479.nnic	chr11	-	663	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-31	76	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGTTTAGAAGAGTGT	NA	False	NA	-25	True	ATTAAA	-11	NA	27220144	27217044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27217481_27219686_27219816_27220046
transcript_1548.known	chr1	-	1137	5	FSM	ENSG00000117632.23	ENST00000357865.6	1137	5	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_4	1660.96212705167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAATAAAACTGCACAG	9712	False	NA	-42	True	NA	NA	NA	25906991	25900594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906787
transcript_15480.known	chr11	-	745	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTCAGCAATTAAACT	NA	False	NA	NA	False	NA	NA	NA	27220102	27217151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27217481_27219686
transcript_15483.known	chr11	-	1452	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	46.2445672484888	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATATTGTTACTAG	7	True	NA	-15	True	AATAAA	-20	NA	27363215	27338511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
transcript_15485.nic	chr11	-	834	4	ISM	ENSG00000109881.17	ENST00000328697.11	1452	6	-49	2881	-30	-2881	5prime_fragment	FALSE	canonical	3	234	junction_1	57.1722543430523	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTTTATTAAAGTGAC	3633	False	NA	31	True	AAGAAA	-39	NA	27363264	27341392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_27341551_27350331_27350440_27357402_27357542_27362835
transcript_15487.known	chr11	-	2109	3	FSM	ENSG00000109881.17	ENST00000317945.6	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	33.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGCAGAACTCTTG	-12	True	NA	NA	False	AATAAA	-19	NA	27363234	27348868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27350440_27357402_27357542_27362835
transcript_15490.known	chr11	-	4842	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	66.5187943366384	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTATTTCAAG	2	True	NA	-17	True	CATAAA	-15	NA	27506769	27494417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
transcript_155.known	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_9000_11000
transcript_15509.nnic	chr11	-	1183	5	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_2	594.806060829915	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	953	False	NA	-32	True	AATAAA	-16	NA	27634772	27617625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27618024_27618111_27618183_27621289_27621366_27623949_27624146_27634330
transcript_15525.nnic	chr11	-	1960	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-49	949	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_2	602.741145840309	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTTCAGATATCTCTT	1049	False	NA	NA	False	ATTAAA	-21	NA	27634676	27616676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27618024_27618111_27618183_27623949_27624146_27634330
transcript_15528.nnic	chr11	-	1107	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_2	602.741145840309	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	953	False	NA	-32	True	AATAAA	-16	NA	27634772	27617625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27618024_27618111_27618183_27623949_27624146_27634330
transcript_15529.nnic	chr11	-	918	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	692.431946114562	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1147	False	NA	-32	True	AATAAA	-16	NA	27634578	27617625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27618024_27621289_27621366_27623949_27624146_27634330
transcript_15531.nnic	chr11	-	1121	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	669.568185889649	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	953	False	NA	-32	True	AATAAA	-16	NA	27634772	27617625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27618038_27618111_27618183_27623949_27624146_27634330
transcript_15535.known	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	541	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1203	False	NA	-32	True	AATAAA	-16	NA	27634522	27617625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27618024_27623949_27624146_27634330
transcript_15536.nnic	chr11	-	2001	3	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-2	949	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_1	657	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTTCAGATATCTCTT	1096	False	NA	NA	False	ATTAAA	-21	NA	27634629	27616676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27618183_27623949_27624146_27634330
transcript_15539.nnic	chr11	-	1195	3	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_1	657	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	953	False	NA	-32	True	AATAAA	-16	NA	27634772	27617625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_27618183_27623949_27624146_27634330
transcript_15540.nic	chr11	-	597	2	ISM	ENSG00000254934.5	ENST00000534757.1	798	4	-1	5854	-1	-5854	5prime_fragment	FALSE	canonical	3	1607	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGACTGACAACCTG	1097	False	NA	-20	True	GATAAA	-18	NA	27634628	27623846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_27624146_27634330
transcript_15543.known	chr11	-	3918	2	FSM	ENSG00000176697.20	ENST00000530861.5	3918	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	726	False	NA	-90	True	CATAAA	-2	NA	27700900	27654892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27658586_27700675
transcript_15544.known	chr11	-	3985	2	FSM	ENSG00000176697.20	ENST00000356660.9	3985	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-1	True	NA	-90	True	CATAAA	-2	NA	27700455	27654892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_27658586_27700163
transcript_15545.known	chr11	-	3417	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	29.6750631844315	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTCTTGTCTCATT	-8	True	NA	-4	True	ATTAAA	-19	NA	28108156	28020618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
transcript_15549.known	chr11	-	744	2	FSM	ENSG00000121621.7	ENST00000526288.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTTTCTCATAACCT	3	True	NA	NA	False	ATTAAA	-22	NA	28108145	28097331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_28097994_28108063
transcript_15552.known	chr11	+	4208	7	FSM	ENSG00000169519.21	ENST00000407364.8	4208	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	41.4785754603774	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	2	True	NA	15	True	AATAAA	-16	NA	28108387	28333507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
transcript_15554.known	chr11	+	4304	7	FSM	ENSG00000169519.21	ENST00000406787.7	4304	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	48.824231233636	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	NA	False	NA	15	True	AATAAA	-16	NA	28108247	28333507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296796_28296932_28330395
transcript_15558.known	chr11	+	2373	4	FSM	ENSG00000152219.5	ENST00000282032.4	2373	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	41.6439938313104	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCATTGTTAGCG	-4	True	NA	NA	False	AATAAA	-16	NA	30323103	30338223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_30323203_30330885_30331375_30332865_30332994_30336566
transcript_15563.nic	chr11	+	665	3	ISM	ENSG00000152219.5	ENST00000282032.4	2373	4	1	5280	1	0	5prime_fragment	FALSE	canonical	3	253	junction_2	51	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAAAAAGAAGGCT	-3	True	NA	NA	False	NA	NA	NA	30323104	30332943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_30323203_30330885_30331375_30332865
transcript_15564.known	chr11	-	2562	7	FSM	ENSG00000066382.17	ENST00000358117.10	2562	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTGTTTAGAGGGTT	13	True	NA	-1	True	AATAAA	-18	NA	30586353	30410223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_30411587_30414227_30414342_30417517_30417634_30495295_30495522_30535993_30536176_30580245_30580495_30586041
transcript_15567.nic	chr11	-	862	8	NIC	ENSG00000148950.11	novel	1905	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	114.195142682361	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-19	True	NA	-39	True	AATAAA	-15	NA	31509630	31432400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31469739_31469798_31473723_31473787_31509518
transcript_1557.known	chr1	-	1443	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_4	446.224719171854	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTGTGAAATGACTAAAG	0	True	NA	-43	True	AATAAA	-23	NA	25906419	25900115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_15572.known	chr11	-	795	7	FSM	ENSG00000148950.11	ENST00000278200.5	795	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	120.013425174945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGTTGTTTTTAATT	-11	True	NA	-40	True	AATAAA	-14	NA	31509622	31432401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31473723_31473787_31509518
transcript_1558.known	chr1	-	2947	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_3	513.595387656687	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTTG	2	True	NA	-15	True	AATAAA	-17	NA	25906417	25900567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
transcript_15580.nnic	chr11	+	2546	6	NNC	ENSG00000170946.15	novel	2970	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.3546212320846	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	-17	True	NA	NA	False	AATAAA	-15	NA	31369839	31432835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270_31431183_31431626
transcript_15581.known	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	108.333928203495	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-11	True	NA	-39	True	AATAAA	-15	NA	31509622	31432400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_1559.known	chr1	-	1783	2	FSM	ENSG00000117632.23	ENST00000513116.1	1783	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCAGTTGCCATGTC	9061	False	NA	NA	False	AATAAA	-22	NA	25892607	25884180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25885870_25892513
transcript_15594.known	chr11	+	2970	5	FSM	ENSG00000170946.15	ENST00000465995.6	2970	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	26.1055549644132	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	3	True	NA	NA	False	AATAAA	-15	NA	31369859	31432835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270
transcript_156.known	SIRV6	+	545	4	FSM	SIRV6A	SIRV606	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	14247	junction_1	3623.37635669029	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
transcript_15604.known	chr11	-	985	5	FSM	ENSG00000148950.11	ENST00000532624.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	31.5158690186388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGCTTTATCAGAAA	6	True	NA	NA	False	NA	NA	NA	31509605	31452544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31453093_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_15610.nic	chr11	-	513	4	NIC	ENSG00000148950.11	novel	733	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	147.060833973186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-14	True	NA	-39	True	AATAAA	-15	NA	31509625	31432400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31509518
transcript_15611.known	chr11	-	469	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	141.563491841019	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-1	True	NA	-39	True	AATAAA	-15	NA	31509574	31432400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
transcript_15615.nnic	chr11	-	481	4	NNC	ENSG00000148950.11	novel	733	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	164.993602569581	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	5	True	NA	-39	True	AATAAA	-15	NA	31509606	31432400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_31432569_31433459_31433571_31488127_31488242_31509518
transcript_15617.known	chr11	+	2745	3	FSM	ENSG00000170946.15	ENST00000529086.5	2745	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	6.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTGAATACCGTTA	-17	True	NA	NA	False	AATAAA	-18	NA	31369839	31417338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31369913_31370715_31370860_31414810
transcript_15619.known	chr11	-	314	3	FSM	ENSG00000148950.11	ENST00000533642.1	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	63	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTTGACTTGATTA	NA	False	NA	-131	True	NA	NA	NA	31509645	31432492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_31432569_31433459_31433571_31509518
transcript_1562.known	chr1	-	3487	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.74854825112421	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTTGGCTTGCTCTT	7	True	NA	-6	True	AAAAAG	-16	NA	25998063	25959766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
transcript_15620.known	chr11	+	2192	5	FSM	ENSG00000170946.15	ENST00000526042.5	2192	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	42.7492689995981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAACAAGCAT	0	True	NA	NA	False	NA	NA	NA	31369856	31427978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31421971_31422133_31426286
transcript_15623.known	chr11	+	8093	10	FSM	ENSG00000109911.19	ENST00000640961.2	8093	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.7861879449752	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGTGTCACTTTTTATT	-5	True	NA	NA	False	AATAAA	-16	NA	31509766	31790324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
transcript_15628.known	chr11	+	1392	10	FSM	ENSG00000109911.19	ENST00000640342.1	1392	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.8949851442289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAACCATAAACAAA	-2	True	NA	NA	False	ATTAAA	-10	NA	31509769	31719703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603764_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31719472
transcript_15629.known	chr11	+	2369	6	FSM	ENSG00000049449.10	ENST00000054950.4	2369	6	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_5	93.4742745358315	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTCTAGGTCATTT	-17	True	NA	8	True	AATAAA	-18	NA	32091073	32105722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_32091451_32097143_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
transcript_15633.known	chr11	+	5047	11	FSM	ENSG00000149100.13	ENST00000531120.6	5047	11	0	0	0	0	multi-exon	FALSE	canonical	3	2394	junction_7	205.125839425461	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCATAAAATTCATTTA	-4	True	NA	9	True	AATAAA	-20	NA	32583830	32606264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_15652.known	chr11	+	1207	8	FSM	ENSG00000149100.13	ENST00000524896.5	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	884.465732887974	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTCCAACGTCTC	-1	True	NA	NA	False	NA	NA	NA	32583833	32602823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_32583930_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_15662.known	chr11	+	1741	9	FSM	ENSG00000121690.11	ENST00000241051.8	1741	9	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_5	4.29934588047996	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTGTGTCAGAAGCTAT	-20	True	NA	14	True	AATAAA	-16	NA	33015877	33033582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_33016029_33025658_33026050_33027685_33027814_33028602_33028793_33031377_33031590_33032335_33032479_33032667_33032794_33032888_33032968_33033261
transcript_15664.known	chr11	-	2911	22	FSM	ENSG00000176102.13	ENST00000524827.6	2911	22	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_21	115.856193603846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAAACATCATGCTTC	-14	True	NA	-37	True	AATAAA	-4	NA	33161494	33084594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33156707_33156804_33161298
transcript_15665.known	chr11	-	2812	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_10	119.590081110433	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	0	True	NA	-26	True	AATAAA	-15	NA	33161480	33084583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
transcript_15669.known	chr11	+	2649	10	FSM	ENSG00000176148.16	ENST00000334274.9	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	9.32274531706801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAATTAGATTTAACT	-24	True	NA	10	True	ATTAAA	-1	NA	33039571	33073550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_33039793_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_15671.known	chr11	+	2633	10	FSM	ENSG00000176148.16	ENST00000432887.5	2633	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.127372185934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGTTTTCAGATAAA	-4	True	NA	23	True	ATTAAA	-14	NA	33040014	33073563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_33040207_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_15677.nnic	chr11	-	973	4	NNC	ENSG00000176102.13	novel	2812	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	243.33242008961	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	0	True	NA	-26	True	AATAAA	-15	NA	33161480	33084583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_33085290_33085712_33085774_33141962_33141987_33161298
transcript_15680.nic	chr11	-	721	4	ISM	ENSG00000176102.13	ENST00000524827.6	2911	22	5	56836	2	34	5prime_fragment	FALSE	canonical	3	26	junction_3	299.108675902255	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	-9	True	NA	-22	True	ATTAAA	-16	NA	33161489	33141430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_33141763_33141884_33141987_33156707_33156804_33161298
transcript_15681.known	chr11	-	1132	3	FSM	ENSG00000176102.13	ENST00000438862.6	1132	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	23	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAGACTGGAATTA	NA	False	NA	NA	False	TTTAAA	-45	NA	33161531	33140965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33141763_33141884_33141987_33161298
transcript_15682.known	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-11	True	NA	16	True	NA	NA	NA	33161491	33141464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33141987_33161298
transcript_15683.known	chr11	-	678	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	210.182063935056	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAAGATAGAGGGGC	NA	False	NA	-26	True	AATAAA	-15	NA	33736479	33709995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
transcript_15687.known	chr11	-	7563	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	82.2692057954993	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-3	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
transcript_1569.known	chr1	+	638	3	FSM	ENSG00000142684.9	ENST00000374266.7	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_2	10	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	-21	True	NA	35	True	AATAAA	-19	NA	26169907	26170873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26170184_26170417_26170481_26170574
transcript_15691.known	chr11	-	2403	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_1	41.4077287471796	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTGTATAATTG	-8	True	NA	-3	True	TTTAAA	-19	NA	33774520	33740943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_15693.nnic	chr11	-	1628	11	NNC	ENSG00000110429.14	novel	1672	10	NA	NA	-6	-1034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.5208668607088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTACTGATGGTTGAAT	-19	False	NA	1	True	AATAAA	-20	NA	33774531	33742772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_33743128_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_15694.nnic	chr11	-	1656	11	NNC	ENSG00000110429.14	novel	1672	10	NA	NA	-6	-1037	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	76.0763432349374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGCTACTGATGGTTG	-19	False	NA	-2	True	AATAAA	-17	NA	33774531	33742775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_33743159_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_15695.nic	chr11	-	3314	11	NIC	ENSG00000110429.14	novel	3217	11	NA	NA	-6	666	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	75.2478571123457	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTCTCCTACATTAAT	-19	False	NA	0	True	AATAAA	-16	NA	33774531	33744018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_33746060_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_15698.known	chr11	-	1672	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	31.1555238547945	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	NA	False	NA	NA	False	AATAAA	-33	NA	33774543	33746742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_157.known	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	7976.38286164572	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
transcript_1570.known	chr1	+	698	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	13	True	NA	35	True	AATAAA	-19	NA	26169941	26170873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26170184_26170417
transcript_15701.known	chr11	+	3973	29	FSM	ENSG00000135372.10	ENST00000257829.8	3973	29	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_13	23.8779849079713	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	10	True	NA	21	True	AATAAA	-17	NA	34105628	34146908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34105793_34108210_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_15704.known	chr11	+	3436	27	FSM	ENSG00000135372.10	ENST00000531159.6	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	57.4444934043744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCCAGGAGGCTGCT	-2	True	NA	NA	False	NA	NA	NA	34105616	34146574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34105793_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_15706.known	chr11	-	4905	17	FSM	ENSG00000166016.6	ENST00000435224.3	4905	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	3.65504787930336	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCACTGCTCCTG	-3	True	NA	0	True	AATAAA	-17	NA	34358010	34150986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_34152585_34154264_34154379_34154700_34154770_34159295_34159387_34159905_34160009_34160247_34160354_34160902_34161082_34162575_34162806_34164685_34164822_34165259_34165357_34167258_34167361_34167902_34167993_34170905_34171072_34173154_34173308_34197324_34197539_34204543_34204691_34356700
transcript_15708.known	chr11	+	2291	13	FSM	ENSG00000121691.7	ENST00000241052.5	2291	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	21.2581683647068	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTATTTTCTTTCTT	-24	True	NA	10	True	AATAAA	-20	NA	34438933	34472060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
transcript_1571.known	chr1	+	2535	21	FSM	ENSG00000142675.18	ENST00000361530.11	2535	21	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_8	16.3113457446037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	-18	True	NA	26	True	AATAAA	-18	NA	26177490	26189884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_15710.known	chr11	+	348	2	FSM	ENSG00000121691.7	ENST00000525707.2	348	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAAACTA	NA	False	NA	NA	False	AAAAAG	-39	NA	34464110	34468510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34464236_34468287
transcript_15713.nnic	chr11	+	2000	2	Genic_Genomic	ENSG00000271369.1	novel	562	1	NA	NA	-17259	560	multi-exon	FALSE	canonical	3	27	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCCTTACATGTTT	NA	False	NA	15	True	AATAAA	-18	NA	34692340	34710721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr11_+_34692890_34709270
transcript_15714.known	chr11	+	2500	11	FSM	ENSG00000110435.13	ENST00000227868.9	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_10	42.4758755059857	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	-17	True	NA	10	True	AATAAA	-19	NA	34916617	34996128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_15719.known	chr11	+	952	6	FSM	ENSG00000110435.13	ENST00000430469.6	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	183.822305501808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTATTTATTTAA	-3	True	NA	NA	False	AAGAAA	-45	NA	34916631	34995275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34984569_34984729_34992314_34992380_34994913
transcript_1572.known	chr1	+	624	3	FSM	ENSG00000142675.18	ENST00000465415.1	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCCAACATGGTGAA	-6	True	NA	NA	False	NA	NA	NA	26177502	26181083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26177600_26180452_26180611_26180714
transcript_15722.nnic	chr11	-	1290	8	NNC	ENSG00000149089.13	novel	1246	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	131.031075921488	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	94	False	NA	-12	True	AATAAA	-15	NA	34916403	34882369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34896760_34896856_34916227
transcript_15724.known	chr11	-	1246	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	68.5599899520283	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCCTCAATGTTAATG	-25	True	NA	-10	True	AATAAA	-21	NA	34916379	34882294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_15727.known	chr11	-	1042	6	FSM	ENSG00000149089.13	ENST00000527830.1	1042	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	104.396168512068	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	3	True	NA	-12	True	AATAAA	-15	NA	34916351	34882369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34916227
transcript_1573.known	chr1	+	1078	4	FSM	ENSG00000236155.7	ENST00000451482.2	1083	4	5	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	14.8996644257513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	1	True	NA	NA	False	AATAAA	-44	NA	26225319	26229840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26225704_26227403_26227556_26227793_26227997_26229501
transcript_15732.known	chr11	+	2292	12	FSM	ENSG00000026508.21	ENST00000433892.6	2292	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	5.46514122370514	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	17	False	NA	13	True	AATAAA	-24	NA	35139187	35230027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_15735.known	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	7.806247497998	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	0	True	NA	NA	False	ATTAAA	-32	NA	35139170	35232402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_15737.known	chr11	-	2785	12	FSM	ENSG00000149090.13	ENST00000622144.4	2785	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	38.8244619148187	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATGCTCTTATTTCT	1	True	NA	NA	False	AATAAA	-32	NA	35525623	35431822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35451887_35451939_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_15739.known	chr11	-	2723	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	15.2921548514263	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTGCTATGCTCTTAT	8	True	NA	NA	False	AATAAA	-28	NA	35525616	35431826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_1574.nnic	chr1	+	739	3	FSM	ENSG00000236155.7	ENST00000692018.1	935	3	192	4	187	0	multi-exon	FALSE	canonical	3	35	junction_1	2.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	158	False	NA	NA	False	AATAAA	-44	NA	26225506	26229840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26225704_26227793_26227997_26229501
transcript_15743.known	chr11	+	12994	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	23.7315717979235	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCAGGTGTTTCTT	2	True	NA	NA	False	ATTAAA	-16	NA	35662774	35818007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
transcript_15749.known	chr11	+	3814	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	15.8619040471187	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	-7	True	NA	22	True	AATAAA	-18	NA	35944061	36232136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_15752.nnic	chr11	-	1396	6	NNC	ENSG00000110442.12	novel	2949	6	NA	NA	49	0	intron_retention	FALSE	canonical	2	2	junction_5	145.224515836686	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTTTGTAGCTTCTT	46	False	NA	-4	True	ACTAAA	-19	NA	36289375	36273959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289197
transcript_15753.known	chr11	-	2949	6	FSM	ENSG00000110442.12	ENST00000263401.10	2949	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	26.55861442169	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTGATCATTTAAGGCA	-3	True	NA	NA	False	AATAAA	-17	NA	36289424	36272291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_15755.known	chr11	-	881	5	FSM	ENSG00000110442.12	ENST00000532705.1	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	167.249813153857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAGCTGTTTGAGAAAT	-3	True	NA	NA	False	NA	NA	NA	36289424	36274324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_36274773_36276136_36276241_36278476_36278617_36280711_36280838_36289361
transcript_15758.known	chr11	-	7885	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_3	15.2032525759749	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATAGTCCAAGTGGTTT	-6	True	NA	-11	True	ATTAAA	-21	NA	36510272	36483768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
transcript_1576.known	chr1	+	3935	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	51.6422605713874	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	-8	True	NA	17	True	AATAAA	-15	NA	26234201	26278808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
transcript_15761.known	chr11	+	930	6	FSM	ENSG00000166352.18	ENST00000531554.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	61.3070958372683	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	-18	True	NA	32	True	AATAAA	-33	NA	36594501	36659287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15762.known	chr11	+	866	6	FSM	ENSG00000166352.18	ENST00000334307.10	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	64.2507587503836	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-18	True	NA	17	True	AATAAA	-18	NA	36594501	36659272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15763.known	chr11	+	1062	6	FSM	ENSG00000166352.18	ENST00000446510.6	1062	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	103.52854678783	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTGCACTCATTTAT	51	False	NA	35	True	AATAAA	-36	NA	36594492	36659290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594762_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15764.known	chr11	+	1207	6	FSM	ENSG00000166352.18	ENST00000617650.5	1207	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.767527576724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGCACTCATTTA	-19	True	NA	34	True	AATAAA	-35	NA	36594500	36659289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15766.known	chr11	+	3485	5	FSM	ENSG00000166352.18	ENST00000677116.1	3485	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	122.217787167008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATCCACCAATTTCT	-18	True	NA	NA	False	ATTAAA	-16	NA	36594501	36661909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_15768.known	chr11	+	3438	5	FSM	ENSG00000166352.18	ENST00000679072.1	3438	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	122.921468832747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAATATATTATTAAAA	45	False	NA	NA	False	ATTAAA	-3	NA	36594486	36661896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_1577.known	chr1	+	3934	14	FSM	ENSG00000130695.16	ENST00000451429.8	3934	14	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_13	27.4042712517636	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	-10	True	NA	17	True	AATAAA	-15	NA	26234199	26278808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277135
transcript_15771.known	chr11	+	646	4	FSM	ENSG00000166352.18	ENST00000527108.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	108.70142593361	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCCTTTGTGGAAATT	26	False	NA	14	True	AATAAA	-15	NA	36594545	36659269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594642_36610080_36610240_36648015_36648156_36659018
transcript_15773.known	chr11	+	633	4	FSM	ENSG00000166352.18	ENST00000347206.8	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	110.236110236165	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-7	True	NA	17	True	AATAAA	-18	NA	36594512	36659272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594593_36610080_36610240_36648015_36648156_36659018
transcript_15775.known	chr11	+	801	4	FSM	ENSG00000166352.18	ENST00000534635.5	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	139.490342158716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGTGGAAATTTACAT	-4	True	NA	19	True	AATAAA	-20	NA	36594515	36659274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594762_36610080_36610240_36648015_36648156_36659018
transcript_15777.known	chr11	+	488	3	FSM	ENSG00000166352.18	ENST00000677808.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-21	True	NA	17	True	AATAAA	-18	NA	36594498	36659272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594593_36648015_36648156_36659018
transcript_15778.known	chr11	+	1005	7	FSM	ENSG00000166352.18	ENST00000676979.1	1005	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	124.813193747029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-21	True	NA	17	True	AATAAA	-18	NA	36594498	36659272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_36594642_36597643_36597731_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_15781.nic	chr11	+	4648	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	404	junction_19	125.998835697883	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	-18	True	NA	17	True	AATAAA	-18	NA	43358930	43494931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_15782.known	chr11	+	3648	20	FSM	ENSG00000052841.15	ENST00000299240.10	3648	20	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_19	163.072235578655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCTCCTTCCTGCC	-17	True	NA	NA	False	TATAAA	-16	NA	43358931	43446719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930
transcript_15786.nic	chr11	+	1420	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-1	45097	-1	0	5prime_fragment	FALSE	canonical	3	720	junction_9	57.4716247753706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	-18	True	NA	16	True	TATAAA	-32	NA	43358930	43401622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_15787.nic	chr11	+	1825	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-1	44692	-1	405	5prime_fragment	FALSE	canonical	3	720	junction_9	57.4716247753706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAGCGAGAGAGAGATT	-18	True	NA	NA	False	AATAAA	-41	NA	43358930	43402027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_15789.nnic	chr11	+	1114	7	NNC	ENSG00000052841.15	novel	3648	20	NA	NA	-3	-1085	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	378.744600254871	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGATCTCAAAAAGTTC	-20	True	NA	NA	False	AAGAAA	-30	NA	43358928	43396973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_43359114_43373509_43373670_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708
transcript_15790.nic	chr11	+	952	6	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-1	49746	-1	-1085	5prime_fragment	FALSE	canonical	3	784	junction_2	41.4632367284562	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGATCTCAAAAAGTTC	-18	True	NA	NA	False	AAGAAA	-30	NA	43358930	43396973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708
transcript_15791.nic	chr11	+	1297	3	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-1	56044	-1	-1113	5prime_fragment	FALSE	canonical	3	784	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAAAAATAAAATTGAA	-18	True	NA	NA	False	AATAAA	-42	NA	43358930	43390675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43359114_43379232_43379323_43389651
transcript_15792.known	chr11	+	4488	24	FSM	ENSG00000052841.15	ENST00000039989.9	4488	24	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	182.241587513064	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	-29	True	NA	17	True	AATAAA	-18	NA	43358919	43494931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_15796.known	chr11	+	2257	15	FSM	ENSG00000166181.13	ENST00000455725.6	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	526.886929743654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCATTCCTACCTAG	-33	True	NA	NA	False	AATAAA	-14	NA	43311977	43342980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318420_43318483_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_158.known	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14247	junction_1	3254.29027400753	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
transcript_15805.known	chr11	+	3726	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_13	292.10679331064	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-15	True	NA	18	True	AATAAA	-18	NA	43311995	43344529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_15806.known	chr11	+	3714	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_13	266.767212307154	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-8	True	NA	18	True	AATAAA	-18	NA	43312002	43344529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
transcript_15807.known	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_9	160.173408633685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	85	False	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
transcript_15817.nic	chr11	+	2407	6	ISM	ENSG00000166181.13	ENST00000534600.5	1760	13	-141	11110	-8	6136	5prime_fragment	FALSE	canonical	3	1543	junction_5	170.769318087296	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACGCATGGATTACAAAAC	NA	False	NA	NA	False	AAAAAG	-39	NA	43311954	43325120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429
transcript_15821.known	chr11	+	2396	11	FSM	ENSG00000149084.13	ENST00000278353.10	2396	11	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_3	53.0241454433732	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	20	True	NA	24	True	AATAAA	-43	NA	43680737	43856615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_15825.known	chr11	+	866	10	FSM	ENSG00000149084.13	ENST00000637401.1	866	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	304.640447854739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATAACTGCATTGTAAC	2	True	NA	NA	False	AAGAAA	-18	NA	43680794	43855250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_15832.known	chr11	+	1544	10	FSM	ENSG00000166199.13	ENST00000302708.9	1544	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	13.3813948598441	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	-14	True	NA	22	True	ATTAAA	-24	NA	43880830	43920274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_15833.nic	chr11	+	1811	10	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	16.559656464499	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	-14	True	NA	22	True	ATTAAA	-24	NA	43880830	43920274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43881447_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_15834.nnic	chr11	+	1334	9	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	20.9489707384396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	-14	True	NA	22	True	ATTAAA	-24	NA	43880830	43920274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43919037_43919137_43919917
transcript_15835.nic	chr11	+	1455	9	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	18.6342259028917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	-14	True	NA	22	True	ATTAAA	-24	NA	43880830	43920274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43901515_43901726_43919037_43919137_43919917
transcript_15842.known	chr11	+	2383	15	FSM	ENSG00000110455.14	ENST00000263776.9	2383	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4.59202947441298	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAGGAGAATGGAATGA	4	True	NA	NA	False	AATAAA	-21	NA	44066269	44084237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_44066702_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
transcript_15844.nic	chr11	+	2844	15	NIC	ENSG00000110455.14	novel	2383	15	NA	NA	7	126	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	4.99591670001306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTCTCCATTGTGAGT	100	False	NA	12	True	ATTAAA	-17	NA	44066185	44084019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_44067297_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
transcript_15850.nnic	chr11	+	1501	6	NNC	ENSG00000151348.16	novel	3631	4	NA	NA	-5524	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	97.6553121954971	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	NA	False	NA	42	True	ATTAAA	-20	NA	44199458	44244931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_44199654_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_15851.nnic	chr11	+	1995	6	NNC	ENSG00000151348.16	novel	3631	4	NA	NA	-5524	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	97.6553121954971	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACATGTGTGAATTATA	NA	False	NA	16	True	ATTAAA	-19	NA	44199458	44245425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_44199654_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_15852.known	chr11	+	2212	10	FSM	ENSG00000085117.12	ENST00000227155.9	2212	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.09901951359278	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	-12	True	NA	7	True	ATTAAA	-15	NA	44565662	44620358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_15856.known	chr11	-	3567	7	FSM	ENSG00000175274.19	ENST00000616990.4	3567	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	119.728396334741	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-2	True	AAGAAA	-30	NA	44951306	44932347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
transcript_15859.known	chr11	+	3429	2	FSM	ENSG00000181830.9	ENST00000314134.4	3429	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	-1	True	NA	13	True	AATAAA	-13	NA	45805148	45813016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_45806337_45810775
transcript_1586.known	chr1	-	2043	16	NIC	ENSG00000158062.21	novel	1944	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	60.7425898544195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	26318363	26282283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591_26306705_26318046
transcript_15864.known	chr11	-	1479	11	FSM	ENSG00000121680.16	ENST00000241041.7	1479	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.7530694253176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGACATCGGGCACT	8	True	NA	NA	False	AGTAAA	-17	NA	45917829	45909668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_45910178_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_15866.known	chr11	-	1668	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	26.0124969966361	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCGGGCACTGGCCAG	2	True	NA	NA	False	AGTAAA	-23	NA	45917877	45909662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_15868.known	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	66.3633181810554	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	8	True	NA	-36	True	NA	NA	NA	45918812	45910204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
transcript_15886.known	chr11	-	3675	18	FSM	ENSG00000135365.17	ENST00000323180.10	3675	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	28.6915345049569	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCCGTGTAGTTAT	266	False	NA	-6	True	ATTAAA	-17	NA	46121178	45932565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45946075_45946099_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
transcript_15887.known	chr11	-	2730	18	FSM	ENSG00000135365.17	ENST00000418153.6	2730	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	24.5655679361924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAATTGAGATTTCA	-26	True	NA	NA	False	TATAAA	-6	NA	46121010	45933480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969902_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
transcript_15888.known	chr11	+	941	3	FSM	ENSG00000255314.4	ENST00000533793.1	941	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTTCTGAGTCTGT	25	False	NA	NA	False	AGTAAA	-15	NA	46171946	46177105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46172025_46174584_46174691_46176348
transcript_15889.known	chr11	+	2673	12	FSM	ENSG00000157613.11	ENST00000621158.5	2673	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15.7122892367042	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	-4	True	NA	NA	False	AAGAAA	-26	NA	46277661	46321409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46278214_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_15890.nnic	chr11	+	2211	12	NNC	ENSG00000157613.11	novel	1817	4	NA	NA	-407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8492005658121	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	NA	False	NA	NA	False	AAGAAA	-26	NA	46294718	46321409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_46294809_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_15891.known	chr11	+	1166	5	FSM	ENSG00000110492.17	ENST00000405308.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4477.66883405863	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTCTTCTTTTTT	5	False	NA	-12	True	AATAAA	-17	NA	46380755	46383799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15893.known	chr11	+	985	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4569.42345241716	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	-9	True	NA	14	True	AATAAA	-43	NA	46381067	46383825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15894.known	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	7276	junction_1	1423.58884074722	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	0	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15898.known	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	4453.43206836031	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	1	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_159.known	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3414	junction_3	8043.65104834241	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
transcript_15900.known	chr11	+	603	4	FSM	ENSG00000110492.17	ENST00000490240.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4818.47391700826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTAAACCTTAAGT	-16	True	NA	74	True	GGGGCT	-33	NA	46381060	46382821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586
transcript_15902.known	chr11	+	686	4	FSM	ENSG00000110492.17	ENST00000395569.8	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	4463.83843295829	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	0	True	NA	14	True	AATAAA	-43	NA	46381668	46383825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381759_46382056_46382134_46382586_46382749_46383468
transcript_15903.known	chr11	+	498	4	FSM	ENSG00000110492.17	ENST00000533283.5	498	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4994.28900512041	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACCCACCAGTGCCTT	24	False	NA	NA	False	NA	NA	NA	46381692	46383570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46381759_46382293_46382462_46382586_46382749_46383468
transcript_15905.known	chr11	+	1026	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	10420	junction_2	161.831874349757	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	18	False	NA	17	True	AATAAA	-1	NA	46381752	46383783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
transcript_15906.known	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	NA	False	NA	-60	True	NA	NA	NA	46429150	46428652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46428700_46429200
transcript_15908.known	chr11	+	4246	19	FSM	ENSG00000175224.17	ENST00000683050.1	4246	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	174.21482587758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	-3	True	NA	18	True	AATAAA	-18	NA	46617552	46674518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46663996_46664096_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15912.nic	chr11	+	2934	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-233	0	combination_of_known_junctions	TRUE	canonical	3	84	junction_2	126.012247441232	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	0	True	NA	18	True	AATAAA	-20	NA	46617293	46673041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15914.nic	chr11	+	2610	18	NIC	ENSG00000175224.17	novel	4246	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	137.47037428562	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-3	True	NA	18	True	AATAAA	-20	NA	46617552	46673041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46617891_46618324_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15920.known	chr11	+	4014	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	72.7375418886286	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	21	True	NA	20	True	AATAAA	-20	NA	46617576	46674520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15922.nic	chr11	+	2629	17	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	136.237370400893	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-13	True	NA	18	True	AATAAA	-20	NA	46617542	46673041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15923.known	chr11	+	4348	17	FSM	ENSG00000175224.17	ENST00000359513.8	4348	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	163.417972064733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCGTTATCAGCTCTT	40	False	NA	NA	False	AGTAAA	-17	NA	46617595	46674818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15924.known	chr11	+	2566	17	FSM	ENSG00000175224.17	ENST00000529655.5	2566	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	147.606688110668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-15	True	NA	18	True	AATAAA	-20	NA	46617540	46673041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46618324_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15927.nic	chr11	+	2762	16	NIC	ENSG00000175224.17	novel	2566	17	NA	NA	-233	0	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	95.0444574338182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	0	True	NA	18	True	AATAAA	-20	NA	46617293	46673041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15930.known	chr11	+	2030	15	FSM	ENSG00000175224.17	ENST00000530500.5	2030	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	121.566224498318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTCCTGCCTGGGCCT	7	True	NA	NA	False	NA	NA	NA	46617562	46672660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46617891_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_15932.known	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	46617227	46602860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46603910_46615567_46616382_46617123
transcript_15933.nic	chr11	-	1767	3	NIC	ENSG00000180423.4	novel	1967	3	NA	NA	-17	-461	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	25.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGCTCCCTACTATCCA	NA	False	NA	-23	True	ATTAAA	-13	NA	46617926	46603321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_46603910_46615567_46616382_46617561
transcript_15934.known	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	TRUE	canonical	3	412	junction_2	53.7656308021728	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-19	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
transcript_15935.known	chr11	-	901	4	FSM	ENSG00000175220.12	ENST00000529960.5	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	41.4273125150814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTCCAGACATGTCCTGA	-3	True	NA	NA	False	NA	NA	NA	46700603	46687690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46688261_46695659_46695756_46695974_46696157_46700550
transcript_15936.known	chr11	+	2229	5	FSM	ENSG00000175213.3	ENST00000311764.3	2229	5	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_1	11.0113577727726	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTGTCTGCATCTT	3	True	NA	17	True	CATAAA	-17	NA	46701030	46705912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46701100_46701398_46701677_46702703_46702766_46702983_46703244_46704352
transcript_15937.known	chr11	-	7172	44	FSM	ENSG00000175216.15	ENST00000529230.6	7172	44	0	0	0	0	multi-exon	TRUE	canonical	3	810	junction_28	90.5203454297571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAAGTGAGCTGAGTA	-12	True	NA	NA	False	NA	NA	NA	46846280	46743047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46754887_46755068_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_15939.known	chr11	-	6532	43	FSM	ENSG00000175216.15	ENST00000312055.9	6532	43	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	173.722385201739	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAAGATGCTCCATAT	NA	False	NA	-7	True	AATAAA	-21	NA	46846308	46743535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_15940.nic	chr11	-	943	7	NIC	ENSG00000175216.15	novel	7172	44	NA	NA	0	6804	combination_of_known_junctions	FALSE	canonical	3	84	junction_6	342.33240019347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAATAGTTAAACTTCT	-12	True	NA	-1	True	NA	NA	NA	46846280	46809398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821249_46846219
transcript_15941.nnic	chr11	-	1041	7	NNC	ENSG00000175216.15	novel	6532	43	NA	NA	54	6804	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	362.484788952891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAATAGTTAAACTTCT	-2	True	NA	-1	True	NA	NA	NA	46846226	46809398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846087
transcript_15943.known	chr11	+	1540	3	FSM	ENSG00000247675.8	ENST00000502049.3	1540	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCATTTGATTGGGG	0	True	NA	NA	False	AATAAA	-44	NA	46846415	46874421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46846500_46846609_46846718_46873073
transcript_15944.nic	chr11	+	218	2	FSM	ENSG00000247675.8	ENST00000685514.1	392	2	2	172	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGGAGTTGTTTCCTT	-4	True	NA	NA	False	AGTAAA	-18	NA	46846411	46846739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46846500_46846609
transcript_15947.known	chr11	+	1651	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	103.313842247784	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	25	True	NA	24	True	AATAAA	-21	NA	46936777	47162247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
transcript_15948.known	chr11	+	1650	9	FSM	ENSG00000149179.14	ENST00000278460.12	1650	9	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	44.5617549026068	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	8	True	NA	24	True	AATAAA	-21	NA	46936760	47162247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_15949.nnic	chr11	+	1161	9	NNC	ENSG00000149179.14	novel	1650	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	110.382007138845	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	-37	True	NA	24	True	AATAAA	-21	NA	46936715	47162247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161997
transcript_1595.known	chr1	-	1555	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	46.1838364101785	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	4	True	NA	NA	False	AATAAA	-15	NA	26306632	26282283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_15950.known	chr11	+	1166	9	FSM	ENSG00000149179.14	ENST00000378618.6	1166	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	111.99211746815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTCCCTCTGGGGGAG	1	True	NA	NA	False	AATACA	-18	NA	46936753	47164385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47164092
transcript_15952.nic	chr11	+	1240	8	NIC	ENSG00000149179.14	novel	1916	8	NA	NA	-14	214	combination_of_known_junctions	FALSE	canonical	3	12	junction_7	117.618893387213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGTGGCTCCACCTGT	-37	True	NA	3	True	AATAAA	-17	NA	46936715	47160025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47159632
transcript_15953.known	chr11	+	1916	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_7	27.0788719507008	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	15	True	NA	24	True	AATAAA	-21	NA	46936767	47162247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
transcript_15954.known	chr11	+	1069	8	FSM	ENSG00000149179.14	ENST00000527784.5	1069	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.670744472008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAATGGCCTGCTCTCC	27	True	NA	NA	False	GGGGCT	-31	NA	46936779	47161816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_15956.known	chr11	+	1527	8	FSM	ENSG00000149179.14	ENST00000525895.5	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	104.729388893277	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	26	True	NA	22	True	AATAAA	-19	NA	46936778	47162245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_15961.known	chr11	+	719	4	FSM	ENSG00000149179.14	ENST00000532840.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	14.7196014438797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGAAAAGAGGGGCTG	7	True	NA	NA	False	NA	NA	NA	46936759	47138037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644
transcript_15963.known	chr11	+	825	3	FSM	ENSG00000149179.14	ENST00000522712.6	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAATATGAAGAAAGAAA	-8	True	NA	NA	False	ATTAAA	-28	NA	46936744	47053002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207_46987311_47052387
transcript_15965.known	chr11	+	770	2	FSM	ENSG00000149179.14	ENST00000531648.5	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAATCCCATCAAAAAAT	-5	True	NA	NA	False	AATATA	-34	NA	46936747	46987873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_46936852_46987207
transcript_15966.nnic	chr11	-	2691	16	NNC	ENSG00000149182.15	novel	1000	10	NA	NA	-40	10852	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	121.867614875961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTAGTTTCTGTGGCTG	9502	False	NA	-6	True	AATAAA	-29	NA	47176922	47153446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_47154524_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_15967.known	chr11	-	2773	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_6	49.6429921204057	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-5	True	NA	-6	True	AATAAA	-39	NA	47176879	47164300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_15968.nic	chr11	-	2858	16	NIC	ENSG00000149182.15	novel	2773	16	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	116.81476314614	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	9502	False	NA	-6	True	AATAAA	-39	NA	47176922	47164300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173883_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_15973.nic	chr11	-	2461	12	NIC	ENSG00000149182.15	novel	2773	16	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	135.293192489069	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	9502	False	NA	-6	True	AATAAA	-39	NA	47176922	47164300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47175850_47175924_47176515_47176635_47176781
transcript_15975.known	chr11	-	1558	10	FSM	ENSG00000149182.15	ENST00000533243.5	1558	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	151.122058426988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATTCCCTCTCACA	9860	False	NA	NA	False	NA	NA	NA	47177125	47165280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47176515_47176635_47176781
transcript_15977.nic	chr11	-	1173	5	ISM	ENSG00000149182.15	ENST00000533939.5	577	6	-75	535	-40	16	5prime_fragment	FALSE	canonical	3	395	junction_2	65.5605636034346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9502	False	NA	NA	False	NA	NA	NA	47176922	47174390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_15978.known	chr11	-	451	4	FSM	ENSG00000149182.15	ENST00000530794.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	75.5263015261718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGTTAGGAGTATTCAG	-6	True	NA	NA	False	GGGGCT	-7	NA	47176880	47175153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47175314_47175850_47175924_47176515_47176635_47176781
transcript_15979.known	chr11	-	1723	3	FSM	ENSG00000149182.15	ENST00000526185.5	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	34	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	47176868	47174406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47175924_47176515_47176635_47176781
transcript_1598.known	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_11	55.8762368646444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-4	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_15980.known	chr11	-	519	2	FSM	ENSG00000149182.15	ENST00000528072.1	519	2	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCTCTAGTGAGACTG	-5	True	NA	NA	False	NA	NA	NA	47176879	47176213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47176635_47176781
transcript_15983.known	chr11	-	1873	11	FSM	ENSG00000165912.16	ENST00000298838.11	1873	11	0	0	0	0	multi-exon	FALSE	canonical	2	315	junction_3	69.1450648998177	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-10	True	NA	-5	True	ATTAAA	-38	NA	47186434	47177521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_15987.known	chr11	+	1815	10	FSM	ENSG00000134574.12	ENST00000256996.9	1815	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	56.8671833592088	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	-4	True	NA	14	True	AATAAA	-15	NA	47214973	47239217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15990.known	chr11	+	1591	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	86.42039328191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	14	True	NA	-14	True	NA	NA	NA	47214991	47239189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15991.known	chr11	+	1092	9	FSM	ENSG00000134574.12	ENST00000378603.7	1092	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	91.1454023799336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	56	False	NA	NA	False	NA	NA	NA	47215136	47238849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15994.known	chr11	+	960	8	FSM	ENSG00000134574.12	ENST00000616278.4	960	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	113.385382205817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	56	False	NA	NA	False	NA	NA	NA	47215136	47238849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_15995.known	chr11	+	717	6	FSM	ENSG00000134574.12	ENST00000378600.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	111.030446274884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	56	False	NA	NA	False	NA	NA	NA	47215136	47238849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47237836_47238002_47238137_47238184_47238799
transcript_15996.known	chr11	+	556	4	FSM	ENSG00000134574.12	ENST00000622878.4	556	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	84.8384084925899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACACTCTGGATTCT	11	True	NA	NA	False	GGGGCT	-12	NA	47214464	47216873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47214675_47215070_47215264_47216335_47216473_47216857
transcript_15997.known	chr11	+	897	3	FSM	ENSG00000134574.12	ENST00000615695.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGAGTGTTTGTTGA	-23	True	NA	NA	False	AATAAA	-10	NA	47215057	47217411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47215264_47216335_47216473_47216857
transcript_15998.known	chr11	+	2181	5	FSM	ENSG00000134574.12	ENST00000617022.4	2181	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	123.621145035952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTGCGTGGATCTTCC	31	True	NA	13	True	AATAAA	-14	NA	47215111	47239216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47216473_47216857_47217050_47237836_47238002_47238137_47238184_47238799
transcript_16.known	ERCC-00044	+	1149	1	FSM	ERCC-00044A	DQ459424	1149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	0	1149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00044_+_0_1100
transcript_160.known	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	20083	junction_1	2545.79880500317	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
transcript_16000.nic	chr11	+	1693	11	NIC	ENSG00000025434.19	novel	1852	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	38.1403985296431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	1	True	NA	26	True	ATTAAA	-16	NA	47257706	47268845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47257736_47257995_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16002.nnic	chr11	-	2104	11	NNC	ENSG00000134575.13	novel	2111	11	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_1	36.6012294875459	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTTTCCTGTGCTTTT	NA	False	NA	0	True	AATGAA	-27	NA	47248858	47239301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_47240199_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_16004.known	chr11	-	2200	11	FSM	ENSG00000134575.13	ENST00000256997.9	2200	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	15.9314155052211	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTGTTTCCTGTGCT	NA	False	NA	-3	True	AATGAA	-24	NA	47248906	47239304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_16005.nnic	chr11	-	2016	11	NNC	ENSG00000134575.13	novel	2200	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.8732965708248	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTGTTTCCTGTGCT	2	True	NA	-3	True	AATGAA	-24	NA	47248805	47239304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_47240167_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_16008.nic	chr11	+	1635	10	NIC	ENSG00000025434.19	novel	2731	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.0928158782976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	-5	True	NA	26	True	ATTAAA	-16	NA	47248894	47268845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16010.nic	chr11	+	1513	10	NIC	ENSG00000025434.19	novel	1852	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	41.7266235287629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	1	True	NA	26	True	ATTAAA	-16	NA	47257706	47268845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47257736_47257995_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16013.known	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	34.8800413410107	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	13	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16015.known	chr11	-	1457	10	FSM	ENSG00000134575.13	ENST00000672075.1	1457	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	41.2187779333763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGCCTCCTCCACGCT	-7	True	NA	NA	False	NA	NA	NA	47248814	47239884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245423_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_16018.known	chr11	+	1501	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	31.3876966341909	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	16	False	NA	-7	True	NA	NA	NA	47248915	47268812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16022.known	chr11	+	1480	9	FSM	ENSG00000025434.19	ENST00000405853.7	1480	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	39.0920388314552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	15	True	NA	24	True	ATTAAA	-14	NA	47257997	47268843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16025.known	chr11	+	1704	8	FSM	ENSG00000025434.19	ENST00000481020.5	1704	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	29.2372421156752	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAAAGGGTTGCGAG	24	False	NA	12	True	ATTAAA	-2	NA	47248923	47268831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16027.known	chr11	+	1352	8	FSM	ENSG00000025434.19	ENST00000405576.5	1352	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	36.2997723049023	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	16	False	NA	24	True	ATTAAA	-14	NA	47248915	47268843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16031.nic	chr11	+	1853	7	NIC	ENSG00000025434.19	novel	1704	8	NA	NA	-30	0	intron_retention	TRUE	canonical	3	32	junction_1	30.2489669245083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	-14	True	NA	26	True	ATTAAA	-16	NA	47248885	47268845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16037.nnic	chr11	+	908	6	NIC	ENSG00000025434.19	novel	1352	8	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	44.4567205268225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	-14	True	NA	26	True	ATTAAA	-16	NA	47248885	47268845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47259790_47259980_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_1604.nic	chr1	-	1516	13	NIC	ENSG00000158062.21	novel	1660	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	50.5409624847894	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-1	True	NA	NA	False	AATAAA	-17	NA	26306697	26282281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
transcript_16044.nic	chr11	+	1388	5	NIC	ENSG00000025434.19	novel	1704	8	NA	NA	-21	0	intron_retention	FALSE	canonical	3	10	junction_1	45.4230117891802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	-5	True	NA	26	True	ATTAAA	-16	NA	47248894	47268845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47249000_47261240_47262019_47267912_47268027_47268260_47268356_47268549
transcript_16046.known	chr11	+	549	4	FSM	ENSG00000025434.19	ENST00000532630.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.1333722286915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTGGCATTAAAAGAGAG	-8	True	NA	-3	True	NA	NA	NA	47248926	47268816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47249000_47267912_47268027_47268260_47268356_47268549
transcript_16048.nic	chr11	+	2291	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	147	junction_1	30.1887069065795	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	-2	True	NA	26	True	AATAAA	-14	NA	47408607	47416496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_1605.known	chr1	-	2542	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	47.9049985793642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	0	True	NA	NA	False	AATAAA	-17	NA	26306636	26282281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_16051.known	chr11	+	2330	10	FSM	ENSG00000165915.14	ENST00000362021.9	2330	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	66.2225950772501	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	-20	True	NA	26	True	AATAAA	-14	NA	47408589	47416496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415038_47415160_47415287
transcript_16056.nic	chr11	-	1443	12	NIC	ENSG00000165916.9	novel	1540	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_11	635.208744241081	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	-5	True	NA	-9	True	AATAAA	-16	NA	47426254	47418774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426116
transcript_16058.known	chr11	-	1540	12	FSM	ENSG00000165916.9	ENST00000298852.8	1540	12	0	0	0	0	multi-exon	FALSE	canonical	3	2014	junction_11	141.657893100547	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	9	True	NA	-9	True	AATAAA	-16	NA	47426439	47418774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
transcript_16075.known	chr11	-	1622	8	FSM	ENSG00000165917.10	ENST00000298854.7	1622	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.494871659305394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGGATTCCGACTTTC	-1	True	NA	NA	False	AATAAA	-15	NA	47449136	47437763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47438048_47438731_47438932_47441158_47441213_47441610_47441734_47441822_47441922_47442655_47442815_47447811_47448151_47448772
transcript_1608.known	chr1	-	1312	12	FSM	ENSG00000158062.21	ENST00000374223.5	1312	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	62.526291990511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	16	True	NA	NA	False	AATAAA	-17	NA	26306620	26282281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
transcript_16081.known	chr11	+	894	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_2	40.1746188532013	677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	5	True	NA	28	True	AATAAA	-17	NA	47579073	47584562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
transcript_16088.known	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_2	39.668067202166	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	-4	True	NA	20	True	AATAAA	-21	NA	47565598	47573461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
transcript_16091.known	chr11	-	2460	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	64.0433880705538	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	7	True	NA	-2	True	AATAAA	-14	NA	47578969	47572197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
transcript_16093.known	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	29.0325487838889	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	6	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
transcript_16098.known	chr11	+	928	3	FSM	ENSG00000110536.14	ENST00000326656.12	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	250.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTCCCCTGAGGGAA	-4	True	NA	NA	False	NA	NA	NA	47565598	47572119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47565797_47565905_47565987_47571470
transcript_161.known	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	21087	junction_2	2414	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6_+_10819_11031_11109_11205
transcript_16103.known	chr11	-	2522	13	FSM	ENSG00000109919.10	ENST00000302503.8	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_10	99.6617891783116	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTTTATCCTGTGGC	-13	True	NA	-10	True	AGTAAA	-18	NA	47642559	47617316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_16104.nic	chr11	-	1101	13	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_12	332.436836105748	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCCTTTTTTGTT	-1	True	NA	-18	True	NA	NA	NA	47642547	47618703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642400
transcript_16112.nnic	chr11	-	1114	12	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	78	junction_2	346.135763743287	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCCTTTTTTGTT	71	False	NA	-18	True	NA	NA	NA	47642606	47618703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47618920_47622700_47622777_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_16133.known	chr11	-	5376	36	FSM	ENSG00000030066.13	ENST00000378460.6	5376	36	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_30	82.9448304474678	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGAGGTGTGTGTTTC	87	False	NA	-3	True	NA	NA	NA	47848467	47778086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_16136.known	chr11	-	4138	28	FSM	ENSG00000030066.13	ENST00000528071.5	4138	28	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_22	72.6994489425003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTTGTTTTATCA	4	True	NA	3	True	AATAAA	-22	NA	47848334	47792011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_16137.nic	chr11	-	1559	9	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-20	29364	-20	0	5prime_fragment	FALSE	canonical	3	634	junction_3	87.9797561942519	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	NA	NA	NA	47848354	47821375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_16138.nic	chr11	-	1839	8	NIC	ENSG00000030066.13	novel	4138	28	NA	NA	-19	16	intron_retention	FALSE	canonical	3	634	junction_2	93.6615705394607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAAGGGAGCTT	-15	True	NA	NA	False	NA	NA	NA	47848353	47821359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_16142.nic	chr11	-	1021	4	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-20	47492	-20	-3	5prime_fragment	FALSE	canonical	3	725	junction_1	83.1745153277132	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCACTGTGTCTTGCCT	-16	True	NA	-5	True	ATTAAA	-37	NA	47848354	47839503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_47840066_47840377_47840589_47847847_47847960_47848218
transcript_16143.known	chr11	-	1537	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	82.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-1	True	NA	-2	True	ATTAAA	-40	NA	47848555	47839500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_47840589_47847847_47847960_47848218
transcript_16144.known	chr11	+	3158	9	FSM	ENSG00000149177.14	ENST00000440289.6	3158	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	11.2354072022335	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGATTCCTTGAAAC	28	False	NA	NA	False	AATAAA	-26	NA	47980579	48132720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48131510
transcript_16145.known	chr11	-	1726	2	FSM	ENSG00000134817.12	ENST00000257254.3	1726	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTCATGAAAGTGT	-11	True	NA	10	True	AATAAA	-28	NA	57237235	57233576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57233859_57235791
transcript_16146.known	chr11	-	5820	12	FSM	ENSG00000149115.14	ENST00000358252.8	5820	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_11	96.0424320825466	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	-19	True	NA	-22	True	AATAAA	-17	NA	57324952	57299641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57312533_57313890_57317817_57317888_57320078_57320713_57321791_57321951_57324839
transcript_16147.known	chr11	-	2831	17	FSM	ENSG00000149136.9	ENST00000278412.7	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_16	89.0587718517946	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-17	True	NA	-25	True	AATAAA	-19	NA	57335892	57325987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_16148.nic	chr11	-	3163	16	ISM	ENSG00000149136.9	ENST00000278412.7	2831	17	157	0	116	0	intron_retention	FALSE	canonical	3	810	junction_10	81.7189220573927	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	140	False	NA	-25	True	AATAAA	-19	NA	57335735	57325987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067
transcript_16155.nic	chr11	-	2625	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	34.8504836841291	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5737	False	NA	-1	True	AATAAA	-20	NA	57427163	57406953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426317_57426587_57426653_57427061
transcript_16156.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	20.4765705338663	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-11	True	NA	-1	True	AATAAA	-20	NA	57427121	57406953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
transcript_16157.nic	chr11	-	2698	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	34.6222215470364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5737	False	NA	-1	True	AATAAA	-20	NA	57427163	57406953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426390_57426587_57426653_57427061
transcript_16160.known	chr11	-	1879	14	FSM	ENSG00000134802.18	ENST00000533524.5	1879	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	51.1007821939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGAGGATGGTTTTGTTC	-11	True	NA	NA	False	AAGAAA	-43	NA	57427121	57407769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425710_57425988_57426390_57426587_57426653_57427061
transcript_16163.nic	chr11	-	2554	13	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	45.7701837687181	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-11	True	NA	-1	True	AATAAA	-20	NA	57427121	57406953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57427061
transcript_16168.known	chr11	-	1796	1	FSM	ENSG00000134802.18	ENST00000625097.1	1796	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	9034	False	NA	-1	True	AATAAA	-20	NA	57408749	57406953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57407000_57408700
transcript_16171.nnic	chr11	-	2312	15	NNC	ENSG00000149150.9	novel	2514	15	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	34.1835531523926	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	1091	False	NA	-5	True	AATAAA	-16	NA	57514638	57484533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514581
transcript_16172.known	chr11	-	2358	15	FSM	ENSG00000149150.9	ENST00000528450.5	2358	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	32.8202432554504	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	0	True	NA	-7	True	AATAAA	-14	NA	57514885	57484535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514780
transcript_16179.nic	chr11	-	2774	14	ISM	ENSG00000149150.9	ENST00000528450.5	2358	15	242	-2	-28	0	3prime_fragment	FALSE	canonical	3	91	junction_10	16.362028490727	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	1086	False	NA	-5	True	AATAAA	-16	NA	57514643	57484533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957
transcript_16197.known	chr11	-	668	3	FSM	ENSG00000134809.9	ENST00000257245.9	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	116	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGCAAAGCAGTGTGC	-12	True	NA	-8	True	TATAAA	-19	NA	57530754	57528463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57528919_57530118_57530235_57530657
transcript_16198.known	chr11	-	530	3	FSM	ENSG00000134809.9	ENST00000525158.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	693	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAAGACTGCCAGGCC	8	True	NA	-18	True	AATAAA	-22	NA	57530734	57528640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57528919_57530118_57530294_57530657
transcript_162.known	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6001_+_0_6000
transcript_16208.known	chr11	-	1219	4	FSM	ENSG00000156587.16	ENST00000287156.9	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	70.4130669691358	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAGTGCAGCTGAGTC	-23	True	NA	-11	True	ATTAAA	-13	NA	57567672	57551661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567584
transcript_16210.known	chr11	-	1573	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	237.885593417415	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCTGAGTCTTTGAT	17	True	NA	-5	True	ATTAAA	-19	NA	57568284	57551655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
transcript_16211.known	chr11	+	1830	8	FSM	ENSG00000149131.17	ENST00000278407.9	1830	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	162.065116668629	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	-3	True	NA	17	True	AATAAA	-17	NA	57597684	57614848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_16212.known	chr11	+	2084	8	FSM	ENSG00000149131.17	ENST00000676670.1	2084	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	218.601305147625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGTGTTGTAGAATAAA	23	False	NA	NA	False	NA	NA	NA	57598183	57619159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327_57614597_57618680
transcript_16214.known	chr11	+	1751	7	FSM	ENSG00000149131.17	ENST00000378324.6	1751	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	230.582595469245	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCTGCTTTGCCTTT	2	True	NA	16	True	AATAAA	-16	NA	57597689	57614847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57597723_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_16215.nic	chr11	+	1870	7	ISM	ENSG00000149131.17	ENST00000278407.9	1830	8	486	0	-13	0	3prime_fragment	FALSE	canonical	3	480	junction_2	77.9650919037203	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	10	False	NA	17	True	AATAAA	-17	NA	57598170	57614848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_16216.known	chr11	+	1004	6	FSM	ENSG00000149131.17	ENST00000531133.5	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	239.458221825854	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCAGGATCAGGTTAG	41	True	NA	NA	False	NA	NA	NA	57598270	57614581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57598322_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_16218.nnic	chr11	+	1219	5	NIC	ENSG00000149131.17	novel	1830	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	254.733684462813	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	-42	True	NA	17	True	AATAAA	-17	NA	57598187	57614848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_57598322_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_16220.nnic	chr11	+	886	3	NIC	ENSG00000149131.17	novel	1748	7	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	335.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	16	False	NA	17	True	AATAAA	-17	NA	57598176	57614848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_57598322_57611716_57611937_57614327
transcript_16221.known	chr11	+	841	3	FSM	ENSG00000149131.17	ENST00000528996.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTTTTTTAT	-1	True	NA	26	True	AATAAA	-26	NA	57598228	57614857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57598329_57611725_57611937_57614327
transcript_16223.known	chr11	+	1634	3	FSM	ENSG00000172409.7	ENST00000302731.4	1634	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	108	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	4	True	NA	32	True	AATAAA	-18	NA	57657762	57661864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57657861_57659454_57659891_57660764
transcript_16224.known	chr11	+	1828	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	26	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGTATAATTTATTT	3	True	NA	33	True	AATAAA	-19	NA	57657761	57661865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57657861_57659454_57660083_57660764
transcript_16227.known	chr11	+	4443	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	39.3101673387223	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	51	True	NA	12	True	AATAAA	-18	NA	57668113	57701182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_16232.known	chr11	-	1203	5	FSM	ENSG00000156603.20	ENST00000431606.5	1099	5	-108	4	-102	0	multi-exon	FALSE	canonical	3	401	junction_2	54.901616551792	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTGTGACTGCC	NA	False	NA	-5	True	TTTAAA	-25	NA	57712323	57703713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_57704107_57704301_57704397_57704718_57704816_57704972_57705230_57711962
transcript_16235.known	chr11	+	1697	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	265.028223371915	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCGCGTTTGTGTGT	16	True	NA	21	True	AATAAA	-18	NA	57712613	57740969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16237.known	chr11	+	1645	8	FSM	ENSG00000213593.10	ENST00000278422.9	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	104.653168677712	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	-5	True	NA	25	True	AATAAA	-22	NA	57712592	57740973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57737912_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16242.known	chr11	+	1521	7	FSM	ENSG00000213593.10	ENST00000378312.8	1521	7	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	235.643091701553	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	5	True	NA	25	True	AATAAA	-22	NA	57712602	57740973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16244.known	chr11	+	829	6	FSM	ENSG00000213593.10	ENST00000528110.5	829	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	326.361394775791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	16	True	NA	NA	False	NA	NA	NA	57712613	57740369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_16246.known	chr11	+	663	4	FSM	ENSG00000213593.10	ENST00000530114.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	393.643945152921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	9	True	NA	NA	False	NA	NA	NA	57712606	57740369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57712808_57737607_57737669_57739130_57739261_57740098
transcript_16249.known	chr11	+	5800	17	FSM	ENSG00000198561.16	ENST00000426142.6	5800	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	230.520064202663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57762120_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_1625.known	chr1	+	751	3	FSM	ENSG00000142669.15	ENST00000270792.10	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	30	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGGTTGGTTGTGG	3	True	NA	36	True	ATTAAA	-22	NA	26280085	26281522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26280204_26280764_26280933_26281057
transcript_16250.known	chr11	+	5727	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	199.86236475072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_16251.known	chr11	+	1291	5	NNC	ENSG00000211450.11	novel	1192	4	NA	NA	-241	-103	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1208.069405084	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCAAAGTGCTGGGGT	NA	False	NA	NA	False	NA	NA	NA	57741249	57743411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_57741718_57741808_57741816_57741818_57741955_57742116_57742248_57742862
transcript_16255.known	chr11	+	469	4	FSM	ENSG00000211450.11	ENST00000528798.1	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	1296.14436781642	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAGTAATAGAGTAAAAC	110	False	NA	-6	True	AATAAA	-16	NA	57741681	57743038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808_57741955_57742116_57742228_57742862
transcript_16256.known	chr11	+	1192	4	FSM	ENSG00000211450.11	ENST00000534355.6	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	2587	junction_3	164.991582276861	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTATCTTTTTCAAC	16	True	NA	5	True	AGTAAA	-20	NA	57741490	57743550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808_57741955_57742116_57742248_57742862
transcript_16257.known	chr11	+	833	3	FSM	ENSG00000211450.11	ENST00000388857.8	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	2737	junction_2	125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGACCTTGTCTTTGTCC	0	True	NA	8	True	ATTAAA	-15	NA	57741571	57742657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808_57741955_57742116
transcript_1626.known	chr1	+	768	2	FSM	ENSG00000142669.15	ENST00000319041.6	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGGCCCCGCAGTCC	-1	True	NA	-36	True	NA	NA	NA	26280121	26281450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26280204_26280764
transcript_16261.known	chr11	+	1454	2	FSM	ENSG00000211450.11	ENST00000533321.1	1454	2	0	0	0	0	multi-exon	FALSE	canonical	3	2987	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTAAGGGATGGAC	-11	True	NA	13	True	AATAAA	-35	NA	57741512	57743057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57741718_57741808
transcript_16263.known	chr11	+	4966	14	FSM	ENSG00000198561.16	ENST00000526772.5	4966	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	266.521133857898	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_57762047_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_16264.nic	chr11	-	1966	9	NIC	ENSG00000110031.13	novel	1879	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	3.73329613076702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTCATATTTGTTTG	1414	False	NA	0	True	AATAAA	-21	NA	58578220	58526870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58564154_58564202_58570555_58570714_58577985
transcript_16265.known	chr11	-	1751	8	FSM	ENSG00000110031.13	ENST00000528489.1	1751	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	4.20883424647321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGCTCACTGTCTTA	1414	False	NA	NA	False	NA	NA	NA	58578220	58527038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58570555_58570714_58577985
transcript_16266.known	chr11	-	1879	9	FSM	ENSG00000110031.13	ENST00000528954.5	1879	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.9823830805185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTCATATTTGTTTG	-32	True	NA	0	True	AATAAA	-21	NA	58578166	58526870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58564154_58564202_58570555_58570714_58578018
transcript_16267.known	chr11	+	5776	11	FSM	ENSG00000186660.15	ENST00000316059.7	5776	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.94203556244326	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTTCAGCTTATTGG	-12	True	NA	NA	False	TATAAA	-17	NA	58579062	58621550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_58579623_58584855_58584885_58609829_58610040_58610297_58610335_58610949_58611055_58611603_58611739_58612277_58612329_58612761_58612841_58614228_58614344_58616715_58616816_58617195
transcript_1627.known	chr1	+	467	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTCCTGCTTGTGGTT	0	True	NA	19	True	AATAAA	-19	NA	26317957	26320523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26318072_26320170
transcript_16274.nic	chr11	+	1663	7	NIC	ENSG00000166840.14	novel	1627	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	5.31507290636732	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATCTGTATGGATACTT	NA	False	NA	NA	False	AATAAA	-18	NA	58927620	58956406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_1628.nic	chr1	-	1368	11	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	44.1666163521726	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	NA	False	NA	-8	True	NA	NA	NA	26337196	26321864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337_26336371_26336605_26336733_26336840_26336981_26337146
transcript_16282.known	chr11	+	3506	4	FSM	ENSG00000189057.11	ENST00000343597.4	3506	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	16.0485374896143	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGAGTATTGGAGGC	0	True	NA	15	True	AATAAA	-25	NA	59107236	59127412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_59107297_59108667_59108713_59109539_59109707_59124178
transcript_16288.known	chr11	+	2364	3	FSM	ENSG00000189057.11	ENST00000529618.5	2364	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	44.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTATCAACAGGGTAAAC	-1	True	NA	NA	False	ATTAAA	-19	NA	59107235	59126436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_59107297_59108667_59108713_59124178
transcript_16290.known	chr11	+	3676	5	FSM	ENSG00000166801.17	ENST00000674617.1	3676	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.4684369298311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTGAGAAACCGTA	46	True	NA	6	True	ATTAAA	-3	NA	59142915	59155024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_59142947_59143082_59143305_59145826_59145857_59148835_59148954_59151749
transcript_16293.nnic	chr11	-	1080	5	NNC	ENSG00000245571.7	novel	2063	4	NA	NA	9	773	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	9.82344135219425	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTTGGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	59143006	59133247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_59133650_59134577_59134684_59136056_59136282_59139956_59140168_59142870
transcript_16294.known	chr11	+	3592	4	FSM	ENSG00000166801.17	ENST00000361723.7	3592	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	37.1872140511882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	-46	True	NA	18	True	ATTAAA	-15	NA	59144778	59155036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_59144897_59145826_59145857_59148796_59148954_59151749
transcript_16296.known	chr11	-	2063	4	FSM	ENSG00000245571.7	ENST00000658798.1	2063	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	10.8730042868667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAAATATGTAACTCCC	NA	False	NA	NA	False	NA	NA	NA	59142758	59134105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142614
transcript_16297.known	chr11	-	880	4	FSM	ENSG00000245571.7	ENST00000531708.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.17726659862414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACCGGCAAGGAATGGA	NA	False	NA	NA	False	NA	NA	NA	59143015	59135289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142870
transcript_16299.nic	chr11	-	2717	3	NIC	ENSG00000245571.7	novel	2659	3	NA	NA	-100	0	intron_retention	FALSE	canonical	3	18	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTGATTTTGCCAATAA	NA	False	NA	-60	True	ATTAAA	-22	NA	59143115	59134020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_59136282_59139956_59140168_59142870
transcript_163.known	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV6003_+_0_6000
transcript_16300.nic	chr11	-	1854	3	NIC	ENSG00000245571.7	novel	880	4	NA	NA	-100	406	intron_retention	FALSE	canonical	3	18	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAGTTATAACC	NA	False	NA	NA	False	AGTAAA	-15	NA	59143115	59134883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_59136282_59139956_59140168_59142870
transcript_16301.nic	chr11	-	1714	3	NIC	ENSG00000245571.7	novel	880	4	NA	NA	-100	266	intron_retention	FALSE	canonical	3	18	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTCCGTCTTTTTGGA	NA	False	NA	NA	False	TATAAA	-22	NA	59143115	59135023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_59136282_59139956_59140168_59142870
transcript_16302.nic	chr11	-	1065	3	ISM	ENSG00000245571.7	ENST00000531708.1	880	4	-100	383	-100	-383	5prime_fragment	FALSE	canonical	3	18	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATATATATATGTTTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	59143115	59135672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_59136282_59139956_59140168_59142870
transcript_16303.known	chr11	-	4129	19	FSM	ENSG00000166889.14	ENST00000300146.10	4129	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_18	11.2717553706511	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-19	True	NA	-2	True	AATAAA	-22	NA	59669037	59636715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_16307.known	chr11	+	6154	11	FSM	ENSG00000166900.17	ENST00000337979.9	6154	11	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_6	63.0318173623449	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTACTGTTGTTTTTT	-1	True	NA	7	True	AATAAA	-16	NA	59755375	59805878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_1631.nic	chr1	-	1191	9	ISM	ENSG00000176092.17	ENST00000308182.10	5239	20	17385	0	-362	0	3prime_fragment	TRUE	canonical	3	25	junction_8	37.9685313779714	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	NA	False	NA	-8	True	NA	NA	NA	26336745	26321864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337_26336371_26336605
transcript_16315.known	chr11	-	574	4	FSM	ENSG00000166902.5	ENST00000534340.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	476.816526559221	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCGGGACTCTAGAG	5629	False	NA	-27	True	NA	NA	NA	59810300	59806534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810239
transcript_16317.known	chr11	-	1083	4	FSM	ENSG00000166902.5	ENST00000300151.5	1083	4	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_3	17.7200451466693	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCTCATTGGTCAT	-13	True	NA	-5	True	AATAAA	-21	NA	59810778	59806139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810603
transcript_16318.known	chr11	+	1488	5	FSM	ENSG00000110104.13	ENST00000535217.1	1488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210.325194639159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGGAGAGAAAACATAATA	36	False	NA	-12	True	AATACA	-43	NA	60842144	60851046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_60842405_60842700_60842883_60847923_60848054_60849939_60850015_60850205
transcript_1632.nic	chr1	-	1159	8	ISM	ENSG00000176092.17	ENST00000308182.10	5239	20	17652	0	-95	0	3prime_fragment	FALSE	canonical	3	35	junction_7	33.9987994986138	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	NA	False	NA	-8	True	NA	NA	NA	26336478	26321864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337
transcript_16320.known	chr11	+	1851	4	FSM	ENSG00000110104.13	ENST00000227520.10	1851	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	42.2084772949174	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTCCAATGGGGGAA	4	True	NA	23	True	AATAAA	-14	NA	60842112	60851081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_60842883_60847923_60848054_60849939_60850015_60850205
transcript_16321.known	chr11	-	2337	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	13.5882302011704	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATGTCCCTGCGGTT	1	True	NA	43	True	AATAAA	-20	NA	60906585	60890546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
transcript_16322.known	chr11	+	2129	4	FSM	ENSG00000110108.10	ENST00000227525.8	2129	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_2	7.78888096369861	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGCTTCCATGTC	-29	True	NA	45	True	AATAAA	-16	NA	60914157	60923443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_60914269_60919685_60919931_60920885_60920989_60921773
transcript_16326.known	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	71.894019222742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	6474	False	NA	NA	False	NA	NA	NA	61161136	61132443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
transcript_16327.known	chr11	-	2673	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	16.9466073300823	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	17	True	NA	-5	True	AATAAA	-16	NA	61161426	61130256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
transcript_16331.known	chr11	+	1384	9	FSM	ENSG00000229183.10	ENST00000378149.9	1384	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	4.18330013267038	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61222346	61231694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61222457_61222942_61223106_61225338_61225457_61226325_61226445_61227119_61227320_61228670_61228788_61229918_61230064_61230165_61230265_61231381
transcript_16332.known	chr11	+	1382	9	FSM	ENSG00000256713.8	ENST00000312403.10	1382	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.66634112596269	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61241174	61251444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61241283_61241768_61241932_61244164_61244283_61245151_61245271_61245945_61246146_61248418_61248536_61249668_61249814_61249915_61250015_61251131
transcript_16333.known	chr11	-	4245	27	FSM	ENSG00000167986.15	ENST00000301764.12	4245	27	0	0	0	0	multi-exon	TRUE	canonical	2	1425	junction_2	182.168723404931	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	9	True	NA	NA	False	AATAAA	-19	NA	61333105	61299450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_16335.nic	chr11	+	2446	19	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	47.9305052480498	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	-24	True	NA	NA	False	AAAAAG	-4	NA	61333209	61346890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61333330_61333548_61333651_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_16338.nic	chr11	+	2423	18	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-5	28	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	42.6985085191249	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACACTGCCTCCTCTG	-19	True	NA	NA	False	AATAAA	-20	NA	61333214	61346918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346294
transcript_16339.known	chr11	+	4678	18	FSM	ENSG00000149476.16	ENST00000394900.8	4678	18	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	19.433321364058	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGCCAGGCAAGCAG	-6	True	NA	NA	False	NA	NA	NA	61333227	61349242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_16342.nnic	chr11	+	2222	17	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	42.9042811820685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	-19	True	NA	NA	False	AAAAAG	-4	NA	61333214	61346890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_16347.nic	chr11	-	1976	12	ISM	ENSG00000167986.15	ENST00000680096.1	2873	13	82	951	-8	401	3prime_fragment	FALSE	canonical	3	1647	junction_8	151.711121750549	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATGCTACCATCCAAT	-15	True	NA	NA	False	TATAAA	-37	NA	61333129	61315879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_1635.nnic	chr1	-	1068	7	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-117	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_6	23.8146780135464	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	NA	False	NA	-8	True	NA	NA	NA	26336500	26321864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336337
transcript_16353.known	chr11	-	3205	8	FSM	ENSG00000162144.10	ENST00000426130.6	3205	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	63.5783302834594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	-6	True	NA	50	True	AATATA	-17	NA	61362283	61348753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361732
transcript_16355.known	chr11	-	1803	7	FSM	ENSG00000162144.10	ENST00000447532.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9885237068895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAGTTTCATTAAATAT	364	False	NA	-34	True	NA	NA	NA	61361913	61348837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_16356.known	chr11	-	2584	7	FSM	ENSG00000162144.10	ENST00000294072.9	2584	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	35.9664195234017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-5	True	NA	-1	True	ATTAAA	-17	NA	61361882	61348804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_16361.nic	chr11	+	1064	6	FSM	ENSG00000149483.13	ENST00000688279.1	1073	6	9	0	3	0	multi-exon	FALSE	canonical	3	18	junction_2	65.3250334864055	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	-9	True	NA	14	True	AATAAA	-21	NA	61362369	61369211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364316_61364432_61364519_61366044_61366217_61367922_61367999_61368596
transcript_16366.nic	chr11	+	978	5	NIC	ENSG00000149483.13	novel	1073	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	73.2700484509189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	-9	True	NA	14	True	AATAAA	-21	NA	61362369	61369211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61362421_61364251_61364316_61366044_61366217_61367922_61367999_61368596
transcript_16367.known	chr11	+	1475	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	25.8396497654283	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCTTATGTCC	-5	True	NA	NA	False	AATAAA	-33	NA	61362373	61369509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
transcript_16368.nnic	chr11	+	939	5	FSM	ENSG00000149483.13	ENST00000451389.7	1233	5	208	86	0	-86	multi-exon	FALSE	canonical	3	13	junction_4	74.8698871376203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCTTATGGAAGTTAT	-18	True	NA	4	True	AATAAA	-15	NA	61362360	61373406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61373042
transcript_16369.nnic	chr11	+	1542	5	FSM	ENSG00000149483.13	ENST00000543594.6	1506	5	-36	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	72.8607404573958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	-18	True	NA	14	True	AATAAA	-21	NA	61362360	61369211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364871_61366044_61366217_61367922_61367999_61368596
transcript_16370.known	chr11	+	1134	4	FSM	ENSG00000149483.13	ENST00000692785.1	1932	4	234	564	1	-168	multi-exon	FALSE	canonical	3	173	junction_1	8.83176086632785	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCCCACAGCAGCAGT	8	True	NA	NA	False	NA	NA	NA	61362386	61368583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922
transcript_16372.known	chr11	+	611	2	ISM	ENSG00000149483.13	ENST00000534963.5	740	4	17	1755	0	-1755	intron_retention	FALSE	canonical	3	173	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTGCTTAAGCCCAGG	-18	True	NA	NA	False	NA	NA	NA	61362360	61364802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_61362421_61364251
transcript_16374.known	chr11	+	1053	5	FSM	ENSG00000187049.11	ENST00000515837.7	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	168.941372967074	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTTGCAGCCTTTCCT	-12	True	NA	18	True	AATAAA	-17	NA	61392586	61398846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398269
transcript_16375.nic	chr11	+	1150	5	NIC	ENSG00000187049.11	novel	1090	5	NA	NA	-11	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	160.760691712869	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	176	False	NA	35	True	AATAAA	-34	NA	61392575	61398863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_61392680_61393230_61393333_61393883_61393977_61397727_61397976_61398260
transcript_16376.known	chr11	+	908	5	FSM	ENSG00000187049.11	ENST00000398979.7	908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.760691712869	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATAGGGAGGGGCAAGGT	-7	True	NA	NA	False	NA	NA	NA	61392392	61398493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61392680_61393230_61393333_61393883_61393977_61397773_61397976_61398269
transcript_16393.known	chr11	-	3487	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	68.9112866814919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-12	True	NA	-19	True	AATAAA	-18	NA	61429975	61402728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_16394.known	chr11	-	3650	10	FSM	ENSG00000149532.16	ENST00000394888.8	3650	10	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_5	87.7217824209649	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	-6	True	AATAAA	-23	NA	61430031	61402648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_164.known	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1781.10201841444	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
transcript_1640.known	chr1	+	3458	5	FSM	ENSG00000131914.11	ENST00000254231.4	3458	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1155.30104301866	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	0	True	NA	28	True	AATAAA	-20	NA	26410816	26429719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428588_26429095
transcript_16408.known	chr11	+	555	5	FSM	ENSG00000167985.7	ENST00000359614.9	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	253.0824964315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACAAAGAGCAGAG	0	True	NA	NA	False	AATGAA	-31	NA	61430124	61446005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438244_61438343_61445940
transcript_16409.known	chr11	+	559	5	FSM	ENSG00000167985.7	ENST00000537782.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	253.0824964315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGTTGAGCTGTGCT	0	True	NA	NA	False	AAAACA	-45	NA	61430124	61446059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438294_61438343_61445940
transcript_1641.known	chr1	+	3975	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	111.804392678563	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	0	True	NA	37	True	AATAAA	-29	NA	26410816	26429728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
transcript_16414.known	chr11	+	1077	5	FSM	ENSG00000167985.7	ENST00000542794.5	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	231.050183942796	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTGCCACGAGAGGG	-10	True	NA	104	True	NA	NA	NA	61430041	61446342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003_61438114_61445940
transcript_16417.known	chr11	+	1186	4	FSM	ENSG00000167985.7	ENST00000301761.7	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	47.6188571424762	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATTTCCCAGCCCTC	-1	True	NA	20	True	ATTAAA	-20	NA	61430123	61446733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940
transcript_1642.known	chr1	+	3338	9	FSM	ENSG00000117682.17	ENST00000434391.6	3338	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	68.9814286601836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	4207	False	NA	9	True	AATAGA	-15	NA	26432281	26471294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442707_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_16420.known	chr11	+	835	2	FSM	ENSG00000167985.7	ENST00000542074.1	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAATTATTAAAGCA	-20	True	NA	-16	True	TTTAAA	-19	NA	61430104	61446697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61430183_61445940
transcript_16423.known	chr11	-	1692	4	FSM	ENSG00000134825.16	ENST00000543510.1	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3974.26507531756	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTCTGGGGCCCATT	9424	False	NA	-9	True	AATAAA	-15	NA	61792802	61789130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61791462
transcript_16426.known	chr11	-	578	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	5669	junction_3	1366.53194457925	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTCTGGGCCTACCCTT	1	True	NA	NA	False	NA	NA	NA	61792599	61788948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
transcript_16427.known	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	2766.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-16	True	NA	-8	True	AATAAA	-16	NA	61792616	61789129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61790374_61790603_61792555
transcript_16428.known	chr11	-	517	4	FSM	ENSG00000134825.16	ENST00000541893.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3267.30840635258	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	9646	False	NA	-8	True	AATAAA	-16	NA	61792580	61789129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789784_61789991_61790422_61790603_61792555
transcript_16429.known	chr11	-	468	4	FSM	ENSG00000134825.16	ENST00000257262.12	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	3593.99446608119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-1	True	NA	-8	True	AATAAA	-16	NA	61792601	61789129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789715_61789922_61790492_61790603_61792555
transcript_1643.known	chr1	+	3245	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	59.4637494613315	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	27	True	NA	9	True	AATAGA	-15	NA	26432354	26471294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
transcript_16430.known	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3252.30342304582	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	6	True	NA	-8	True	AATAAA	-16	NA	61792594	61789129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
transcript_16432.known	chr11	+	2964	12	FSM	ENSG00000134824.14	ENST00000257261.10	2964	12	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	722.075337751145	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	-11	True	NA	20	True	AATAAA	-20	NA	61816255	61867354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61816427_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_16433.known	chr11	+	1689	12	FSM	ENSG00000134824.14	ENST00000522056.5	1689	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	780.532198180635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGGCCACCGGGGGTG	27	False	NA	NA	False	NA	NA	NA	61816403	61865957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61816697_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_16434.known	chr11	+	3091	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	0	0	0	0	multi-exon	FALSE	canonical	3	2541	junction_10	125.104386166179	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	1	True	NA	20	True	AATAAA	-20	NA	61828299	61867354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_16436.known	chr11	-	4364	12	FSM	ENSG00000149485.19	ENST00000350997.12	4364	12	0	0	0	0	multi-exon	TRUE	canonical	3	947	junction_4	63.1223395642629	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATTTGTAACCCATG	-7	True	NA	-17	True	AATAAA	-18	NA	61817003	61799626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
transcript_16438.known	chr11	+	1703	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	2609	junction_7	114.114951790825	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACCCTGT	173	False	NA	45	True	AATAAA	-8	NA	61828279	61864221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
transcript_16445.known	chr11	+	2016	2	FSM	ENSG00000168496.4	ENST00000305885.3	2016	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCATGTTCTTTG	-1	True	NA	25	True	AATAAA	-14	NA	61792910	61797238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61793029_61795340
transcript_16446.known	chr11	+	776	2	FSM	ENSG00000168496.4	ENST00000535723.1	776	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAAGGCTGGCAAAGT	39	False	NA	NA	False	NA	NA	NA	61792950	61795856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61793211_61795340
transcript_16447.known	chr11	+	360	3	FSM	ENSG00000134824.14	ENST00000522639.1	360	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATTTCTGAGAAAATAAT	26	False	NA	9	True	ATTAAA	-22	NA	61816402	61826512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_61816427_61826031_61826138_61826282
transcript_16448.known	chr11	-	1790	12	FSM	ENSG00000221968.9	ENST00000278829.7	1790	12	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_4	50.6217540536781	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	9	True	NA	-11	True	ATTAAA	-16	NA	61891545	61873525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_16449.known	chr11	-	5314	8	FSM	ENSG00000221968.9	ENST00000533676.5	5314	8	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_7	19.3812448790377	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTGGAGTGGTGAATT	9072	False	NA	-9	True	ATTAAA	-18	NA	61882526	61873523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040
transcript_16450.known	chr11	-	2125	9	FSM	ENSG00000167994.13	ENST00000301773.9	2125	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	21.7082933460924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	14	False	NA	-5	True	AATAAA	-18	NA	61920269	61897300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61907392_61907471_61907564_61907661_61908053_61908307_61920040
transcript_16452.nic	chr11	-	1377	4	ISM	ENSG00000167994.13	ENST00000394836.7	2325	10	12871	0	7	0	3prime_fragment	FALSE	canonical	3	49	junction_2	3.29983164553722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-4	True	NA	-5	True	AATAAA	-18	NA	61904695	61897300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545
transcript_16454.nnic	chr11	-	882	5	NNC	ENSG00000167996.16	novel	825	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	8394.46107189139	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967443_61967479
transcript_16456.known	chr11	-	1203	4	FSM	ENSG00000167996.16	ENST00000273550.12	1203	4	0	0	0	0	multi-exon	FALSE	canonical	3	18478	junction_2	703.855572306327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGGGATTTTTATCT	1	True	NA	-19	True	AATAAA	-18	NA	61967634	61964284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311
transcript_16457.known	chr11	-	825	5	FSM	ENSG00000167996.16	ENST00000620041.4	825	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	8394.46107189139	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967454_61967547
transcript_16458.known	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	216	junction_2	9221.732821017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
transcript_1646.nic	chr1	+	1300	9	NIC	ENSG00000117682.17	novel	3288	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	60.3032700191291	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGTGTTCCCTTTGCT	-13	True	NA	15	True	NA	NA	NA	26432370	26469226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_16460.known	chr11	+	2182	7	FSM	ENSG00000162174.12	ENST00000301776.9	2182	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	77.2299956119526	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	-12	True	NA	NA	False	AATAAA	-11	NA	62337452	62393406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_16464.known	chr11	+	2270	7	FSM	ENSG00000162174.12	ENST00000415229.6	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	103.884016522701	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTGTGGTTGGGAGTC	-17	True	NA	NA	False	AATAAA	-17	NA	62337447	62393412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_16466.known	chr11	+	1161	6	FSM	ENSG00000162174.12	ENST00000628829.2	1161	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	72.5109646881077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	28	True	NA	NA	False	NA	NA	NA	62337492	62392568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_16467.known	chr11	+	639	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	62.0017920887955	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	30	True	NA	15	True	ATTAAA	-16	NA	62337494	62357201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
transcript_16468.nic	chr11	+	771	4	ISM	ENSG00000162174.12	ENST00000415229.6	2270	7	-8	36211	-8	0	5prime_fragment	FALSE	canonical	3	75	junction_1	136.948489910948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	-25	True	NA	15	True	ATTAAA	-16	NA	62337439	62357201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986
transcript_1647.nic	chr1	+	3368	9	NIC	ENSG00000117682.17	novel	3338	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	60.3032700191291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	-13	True	NA	9	True	AATAGA	-15	NA	26432370	26471294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_16470.nnic	chr11	-	586	3	NNC	ENSG00000124942.14	novel	1024	6	NA	NA	12056	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTGTGTCAACCTT	NA	False	NA	-5	True	AATAAA	-14	NA	62505301	62433545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_62433892_62491731_62491832_62505161
transcript_1648.known	chr1	+	1235	8	FSM	ENSG00000117682.17	ENST00000525682.6	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	69.9994169071924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	11	True	NA	2	True	ACTAAA	-18	NA	26432338	26469373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26457790_26457906_26460036_26460145_26468894
transcript_16480.known	chr11	-	2705	9	FSM	ENSG00000149016.16	ENST00000476907.6	2705	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	46.3087464740733	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCTCCCGTTTCCTTT	-7	True	NA	NA	False	AATAAA	-17	NA	62591523	62575051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_16484.known	chr11	-	1446	10	FSM	ENSG00000254772.10	ENST00000329251.5	1446	10	0	0	0	0	multi-exon	FALSE	canonical	3	6330	junction_9	1461.30642547544	22011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	-3	True	NA	-4	True	ATTAAA	-23	NA	62573891	62559595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830
transcript_16485.known	chr11	-	2496	9	FSM	ENSG00000254772.10	ENST00000525340.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	9830	junction_8	610.951703799081	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTTTCCTGTCCTGCCT	28	True	NA	-11	True	ATTAAA	-16	NA	62573860	62559602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583
transcript_16486.nic	chr11	+	1064	3	NIC	ENSG00000149489.9	novel	862	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	NA	False	NA	9	True	AATAAA	-15	NA	62611770	62615116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_62612092_62614257_62614505_62614620
transcript_16488.known	chr11	+	862	3	FSM	ENSG00000149489.9	ENST00000534093.5	862	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGGATGGAAGCAA	NA	False	NA	-7	True	NA	NA	NA	62611785	62615100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62611921_62614257_62614505_62614620
transcript_16489.known	chr11	+	1358	3	FSM	ENSG00000149489.9	ENST00000278833.4	1358	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	0	True	NA	9	True	AATAAA	-15	NA	62613256	62615116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62613872_62614257_62614505_62614620
transcript_16494.known	chr11	-	1452	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	46.1112784468182	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	-1	True	NA	-27	True	AATAAA	-16	NA	62621986	62615295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_16495.nnic	chr11	-	1449	5	NNC	ENSG00000149541.10	novel	1452	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	94.0648047890389	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	8823	False	NA	-27	True	AATAAA	-16	NA	62621993	62615295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621875
transcript_16497.known	chr11	-	1120	5	FSM	ENSG00000149541.10	ENST00000534026.5	1120	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	74.2849244463505	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGGTGTTAGCCAGGA	1	True	NA	NA	False	NA	NA	NA	62621984	62616066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62616241_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_16501.known	chr11	-	3906	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	354.82160766206	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTAGTCTGGATTCT	-6	True	NA	80	True	AATAAA	-19	NA	62646615	62624825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_16503.known	chr11	-	3835	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	265.873457968587	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	-4	True	NA	77	True	AATAAA	-16	NA	62646613	62624828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_16504.known	chr11	-	3836	23	FSM	ENSG00000089597.18	ENST00000540933.5	3836	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	343.89670573426	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTGGTGGTAGTCTG	6574	False	NA	74	True	AATAAA	-13	NA	62646726	62624831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639626_62639732_62646561
transcript_1651.known	chr1	+	1148	6	FSM	ENSG00000117682.17	ENST00000374185.7	1148	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	47.6713750588338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTTTTTCTTTTCTTT	14	True	NA	NA	False	GGGGCT	-43	NA	26432341	26448176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558
transcript_16510.known	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	1	1	junction_6	1179.99681025934	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-2	True	NA	-1	True	AATAAA	-16	NA	62671769	62662816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
transcript_16514.known	chr11	-	646	4	FSM	ENSG00000278615.5	ENST00000524958.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2187	junction_3	157.319914682012	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-7	True	NA	-1	True	AATAAA	-16	NA	62665210	62662816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62665130
transcript_16515.known	chr11	+	1368	3	FSM	ENSG00000214756.8	ENST00000398922.6	1368	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGGCCTAACCT	-5	True	NA	NA	False	NA	NA	NA	62665308	62667397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665333_62665646_62665947_62666353
transcript_16516.known	chr11	+	2034	3	FSM	ENSG00000214756.8	ENST00000532971.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	116.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCAGCCTCAATTTTCT	-2	True	NA	19	True	TATAAA	-33	NA	62665311	62668108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665333_62665646_62665947_62666395
transcript_16517.known	chr11	-	405	3	FSM	ENSG00000278615.5	ENST00000525675.1	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	2187	junction_2	158	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGCAAAAGAAGACAAAA	12	True	NA	NA	False	NA	NA	NA	62665191	62663114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663334_62664848_62664974_62665130
transcript_16518.known	chr11	+	2870	2	FSM	ENSG00000214756.8	ENST00000529868.1	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTAGCTTCTGTAAC	-1	True	NA	NA	False	NA	NA	NA	62665312	62668496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665333_62665646
transcript_16520.known	chr11	+	1927	2	FSM	ENSG00000204922.5	ENST00000377953.4	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	0	576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAATTTCTGTGTTGTT	-5	True	NA	NA	False	AATAAA	-20	NA	62671672	62673686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62671866_62671952
transcript_16521.known	chr11	+	376	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	22	False	NA	12	True	AATAAA	-17	NA	62665335	62665711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62665300_62665700
transcript_16522.known	chr11	-	3285	2	FSM	ENSG00000185085.2	ENST00000330574.2	3285	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTGCTTCTGTCATGC	-2	True	NA	-1	True	AATAAA	-23	NA	62653302	62646847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62650000_62653169
transcript_16523.known	chr11	-	774	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_2	16.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	22	True	NA	-1	True	AATAAA	-16	NA	62665181	62662816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62663160_62663235_62663334_62664848
transcript_16527.known	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_9	299.570227138236	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-4	True	NA	-116	True	NA	NA	NA	62679081	62676612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
transcript_16534.known	chr11	-	1134	9	FSM	ENSG00000162191.14	ENST00000301935.10	1134	9	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_5	75.7392731678883	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGACTCCTTCCTGA	4	True	NA	-3	True	AATAAA	-19	NA	62679073	62676499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_16535.known	chr11	-	1110	9	FSM	ENSG00000162191.14	ENST00000529640.5	1110	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	339.226486841756	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATGCCTGACTCCTTC	12	True	NA	-7	True	AATAAA	-15	NA	62679065	62676503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677938_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_16538.known	chr11	-	1291	8	FSM	ENSG00000162191.14	ENST00000294119.6	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	80.8520947439817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	22	True	NA	-1	True	AATAAA	-21	NA	62679055	62676497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_1654.known	chr1	+	297	2	FSM	ENSG00000117682.17	ENST00000527611.1	297	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGAGTCTTAGAATGGT	-5	True	NA	NA	False	NA	NA	NA	26432322	26433133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26432377_26432890
transcript_16543.known	chr11	-	1257	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	79.6697264092356	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGAGTTCTGTACAT	10	True	NA	-20	True	AATAAA	-2	NA	62679067	62676516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_16551.known	chr11	-	2073	5	FSM	ENSG00000162191.14	ENST00000532904.5	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_2	104.755369790765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	19	True	NA	-1	True	AATAAA	-21	NA	62679058	62676497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_16552.known	chr11	-	1912	6	FSM	ENSG00000162191.14	ENST00000533476.5	1912	6	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_3	93.9957445845289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGACTCCTTCCTG	4	True	NA	-4	True	AATAAA	-18	NA	62679073	62676500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62676640_62676812_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_16553.known	chr11	-	5214	14	FSM	ENSG00000214753.4	ENST00000301785.7	5214	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.6231855394659	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTCCTGTGGCTGCA	-6	True	NA	-5	True	AATAAA	-22	NA	62727457	62712629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62715380_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
transcript_16556.known	chr11	-	2001	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	134.087056955454	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-13	True	NA	-37	True	AATAAA	-19	NA	62709537	62690274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
transcript_16560.known	chr11	-	1693	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	120.164262574195	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	34	True	NA	-57	True	NA	NA	NA	62706234	62690294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
transcript_16562.known	chr11	-	1516	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_10	67.7389105315401	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	8787	False	NA	-57	True	NA	NA	NA	62706344	62690294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_16563.known	chr11	-	1440	11	FSM	ENSG00000168000.16	ENST00000421906.5	1440	11	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_10	123.091226332343	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTTTTTCCTTCAATA	8787	False	NA	-77	True	NA	NA	NA	62706344	62690314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706258
transcript_16564.known	chr11	-	1710	11	FSM	ENSG00000168000.16	ENST00000360796.10	1710	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_10	80.6074438249967	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-2	True	NA	-37	True	AATAAA	-19	NA	62707424	62690274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_16572.known	chr11	-	1882	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	140.411680425811	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-1	True	NA	-37	True	AATAAA	-19	NA	62707587	62690274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_16575.known	chr11	-	1793	11	FSM	ENSG00000168000.16	ENST00000682223.1	1793	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	140.848890659458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGCACTTTCCCACCT	-1	True	NA	-107	True	AAGAAA	-18	NA	62707587	62690344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690621_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_16579.known	chr11	-	2381	10	FSM	ENSG00000168000.16	ENST00000449636.6	2381	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	134.767655569333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGCTTACAATATTTC	-4	True	NA	NA	False	NA	NA	NA	62707426	62689288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62707108
transcript_1658.known	chr1	+	1148	7	FSM	ENSG00000198830.11	ENST00000619352.4	1148	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4362.60108447039	4180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTT	9	False	NA	NA	False	AATAAA	-22	NA	26472514	26475970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26472563_26472607_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_16584.known	chr11	-	1364	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	133.383416519705	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-3	True	NA	-38	True	AATAAA	-18	NA	62706315	62690275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_166.known	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_2	1801.78014405199	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
transcript_16608.known	chr11	+	864	3	FSM	ENSG00000162188.6	ENST00000294117.6	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCTCCTGTGTTAGAA	-20	True	NA	4	True	AATAAA	-17	NA	62707675	62709201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62707916_62708294_62708395_62708677
transcript_16615.nnic	chr11	+	1955	5	NNC	ENSG00000162222.14	novel	858	4	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.0440004504251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATTTAAGTATTTA	-11	True	NA	NA	False	ATTAAA	-20	NA	62728479	62740285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287_62739146_62739892
transcript_16617.nic	chr11	+	924	4	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	62.579726926715	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	3709	False	NA	14	True	AATATA	-14	NA	62728099	62738636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287
transcript_1662.known	chr1	+	1940	6	FSM	ENSG00000198830.11	ENST00000361427.6	1940	6	0	0	0	0	multi-exon	FALSE	canonical	3	10833	junction_2	616.10667907433	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGTCCATTCCCTTA	8	True	NA	10	True	AATAAA	-17	NA	26472439	26476642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_16620.known	chr11	+	858	4	FSM	ENSG00000162222.14	ENST00000532583.1	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	55.5837706129726	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGCTTGAGAAATATA	111	False	NA	9	True	AATACA	-16	NA	62728641	62738603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287
transcript_16623.nnic	chr11	+	2050	4	NNC	ENSG00000162222.14	novel	858	4	NA	NA	-15	1	intron_retention	FALSE	non_canonical	0	0	junction_3	75.6762108518185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATTTAAGTATTTA	-20	True	NA	NA	False	ATTAAA	-20	NA	62728470	62740285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62729087_62735381_62735565_62738287_62739146_62739892
transcript_16625.known	chr11	+	1133	3	FSM	ENSG00000162222.14	ENST00000316461.9	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	-5	True	NA	14	True	AATATA	-14	NA	62728485	62738636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62729087_62735381_62735565_62738287
transcript_16629.known	chr11	+	346	1	FSM	ENSG00000162222.14	ENST00000601045.1	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGTATTTATTTAATAA	NA	False	NA	NA	False	ATTAAA	-28	NA	62739947	62740293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62739900_62740300
transcript_16630.known	chr11	-	2972	2	FSM	ENSG00000185670.9	ENST00000673933.1	2972	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTTGGCTGGTTTC	3916	False	NA	-7	True	CATAAA	-25	NA	62754184	62750964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62753716_62753963
transcript_16635.known	chr11	+	919	8	FSM	ENSG00000168002.12	ENST00000525455.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	543.038992097967	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTGTTCTAAGTATAA	-5	True	NA	-17	True	NA	NA	NA	62761579	62766673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62761905_62762541_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16636.nic	chr11	+	1202	8	NIC	ENSG00000168002.12	novel	791	8	NA	NA	-71	0	intron_retention	FALSE	canonical	3	74	junction_2	429.358230148111	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	7554	False	NA	20	True	TATAAA	-17	NA	62761493	62766710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_62761661_62761794_62761905_62762541_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16642.known	chr11	+	791	8	FSM	ENSG00000168002.12	ENST00000301788.12	791	8	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_3	45.0641266441954	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	-5	True	NA	20	True	TATAAA	-17	NA	62761579	62766710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16644.known	chr11	+	1053	8	FSM	ENSG00000168002.12	ENST00000524819.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	454.091512848254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGGTTCTCATGGAA	-2	True	NA	5	True	TATAAA	-2	NA	62761582	62766695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62762185_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_1665.known	chr1	+	4377	4	FSM	ENSG00000060642.12	ENST00000674222.1	4377	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	23.4568161143456	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	-11	True	NA	NA	False	AATAAA	-16	NA	26787966	26800659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26787990_26790758_26790894_26794112_26795235_26797562
transcript_16655.known	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	433.803623006232	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	9	False	NA	20	True	TATAAA	-17	NA	62761616	62766710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16658.known	chr11	+	868	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_2	43.2335389355173	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	29	False	NA	20	True	TATAAA	-17	NA	62761636	62766710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_16661.known	chr11	+	1043	5	FSM	ENSG00000185475.11	ENST00000333449.9	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	12.2754836971909	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTGTTACTCCATTC	-8	True	NA	9	True	AATGAA	-20	NA	62787401	62790400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789600_62789680_62789885
transcript_16663.nnic	chr11	+	819	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	167.8635979002	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	-17	True	NA	25	True	NA	NA	NA	62787392	62790246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62787528_62789101_62789211_62789291_62789427_62789600_62789680_62789885
transcript_16664.nnic	chr11	+	792	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	162.244414387676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	-14	True	NA	25	True	NA	NA	NA	62787395	62790246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62787528_62789125_62789211_62789291_62789427_62789600_62789680_62789885
transcript_16668.known	chr11	+	797	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	183.637928786209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	5	True	NA	25	True	NA	NA	NA	62787414	62790246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
transcript_1667.known	chr1	+	4673	4	FSM	ENSG00000060642.12	ENST00000674202.1	4673	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	25.31578339473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	-28	True	NA	NA	False	AATAAA	-16	NA	26787949	26800659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26788269_26790758_26790894_26794112_26795235_26797562
transcript_16670.known	chr11	-	563	4	FSM	ENSG00000168569.8	ENST00000527073.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTCAGGGGTCACTGA	7557	False	NA	NA	False	NA	NA	NA	62791743	62771628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62772000_62772076_62772133_62774594_62774666_62791678
transcript_16671.known	chr11	-	857	3	FSM	ENSG00000168569.8	ENST00000528367.1	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCAGATCGGGGAGGGG	10	True	NA	NA	False	NA	NA	NA	62791992	62771660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62772133_62774594_62774666_62791678
transcript_16672.known	chr11	-	1273	2	FSM	ENSG00000168569.8	ENST00000307366.8	1273	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGGGTGGCTTCAGAC	-4	True	NA	NA	False	NA	NA	NA	62792006	62789970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62790916_62791678
transcript_16674.nic	chr11	-	2244	21	NIC	ENSG00000162231.14	novel	2795	22	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	34.7456472093988	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTTCTGCACTTTTT	407	False	NA	-10	True	TATAAA	-14	NA	62805477	62792170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_16675.known	chr11	-	2290	21	FSM	ENSG00000162231.14	ENST00000294172.7	2290	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_16	19.1140655016142	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-2	True	NA	-10	True	TATAAA	-14	NA	62805440	62792129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_16676.known	chr11	-	4128	20	FSM	ENSG00000162231.14	ENST00000531709.6	4128	20	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_15	19.0966342700281	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTGGATTGGTT	414	False	NA	-3	True	TATAAA	-21	NA	62805470	62792122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_16677.known	chr11	-	1785	11	FSM	ENSG00000162236.13	ENST00000377897.8	1785	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.2796917140732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCATGTCATCATTTCT	17	True	NA	-2	True	NA	NA	NA	62832041	62806896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62807667_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_16679.known	chr11	-	1568	11	FSM	ENSG00000162236.13	ENST00000394690.5	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	60.1552159002027	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTACAGCAAGACTGT	16	True	NA	-30	True	NA	NA	NA	62832042	62806924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831111_62831953
transcript_16682.known	chr11	-	1794	11	FSM	ENSG00000162236.13	ENST00000294179.8	1794	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	15.5692003648229	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGCAGCGAGTGGAG	7	True	NA	35	True	NA	NA	NA	62832051	62806859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_1669.known	chr1	+	4972	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	33.2498955721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCCTCCTGTCCTCA	1	True	NA	NA	False	AATAAA	-9	NA	26788194	26800652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
transcript_16694.known	chr11	-	1366	12	FSM	ENSG00000133316.16	ENST00000529106.5	1366	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	157.371172552069	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCCTGAGCCTTTT	1653	False	NA	-7	True	AATAAA	-14	NA	62840156	62832911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839660_62840077
transcript_167.known	SIRV7	-	2462	5	FSM	SIRV7A	SIRV705	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	2070	junction_2	1376.48435788424	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
transcript_16701.known	chr11	-	191	1	FSM	ENSG00000222328.1	ENST00000410396.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGGGGAGAGAACAACCG	0	True	NA	-6	True	NA	NA	NA	62841809	62841618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62841600_62841800
transcript_16702.known	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_6	26.1543495426669	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-4	True	NA	-6	True	AATAAA	-15	NA	62839590	62832910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_16703.known	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	162.955420700885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	5	True	NA	-6	True	AATAAA	-15	NA	62839581	62832910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_16704.nic	chr11	-	897	12	FSM	ENSG00000255717.8	ENST00000539303.6	897	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	59.480811545815	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-6	True	NA	-23	True	AATAAA	-16	NA	62855886	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16712.known	chr11	-	1117	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	9	0	0	multi-exon	FALSE	canonical	3	84	junction_10	39.8096721915667	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	-6	True	NA	-22	True	AATAAA	-17	NA	62855886	62851986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16714.known	chr11	-	1394	11	FSM	ENSG00000255717.8	ENST00000540725.6	1394	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	60.9925405275104	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-5	True	NA	-23	True	AATAAA	-16	NA	62855885	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855746_62855864
transcript_16726.nic	chr11	-	1065	10	FSM	ENSG00000255717.8	ENST00000686500.1	1073	10	0	8	0	0	multi-exon	TRUE	canonical	3	37	junction_7	60.8734773683382	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-6	True	NA	-23	True	AATAAA	-16	NA	62855886	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62855132_62855217_62855423_62855467_62855864
transcript_16728.known	chr11	-	1438	10	FSM	ENSG00000255717.8	ENST00000653690.1	1438	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	41.9588275560286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	-5	True	NA	-36	True	AATAAA	-3	NA	62855885	62852000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854939_62855132_62855217_62855423_62855467_62855864
transcript_1673.known	chr1	+	5045	8	FSM	ENSG00000204160.12	ENST00000374142.9	5045	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	10.8081601825016	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTCTGGTGGCGCCT	-23	True	NA	NA	False	AATAAA	-25	NA	26826687	26857604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26827140_26832446_26832608_26848607_26848758_26850300_26850439_26850557_26850607_26851128_26851232_26852752_26852866_26853725
transcript_16730.nic	chr11	-	1069	10	FSM	ENSG00000255717.8	ENST00000537869.6	1069	10	-1	1	0	0	multi-exon	FALSE	canonical	3	36	junction_5	60.8527873510742	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-6	True	NA	-23	True	AATAAA	-16	NA	62855886	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16736.known	chr11	-	1320	10	FSM	ENSG00000255717.8	ENST00000663092.1	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	40.4578732284934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGGACTGGCTGTCAA	NA	False	NA	-96	True	AAAAAG	-5	NA	62855953	62852060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16739.nic	chr11	-	1351	10	NIC	ENSG00000255717.8	novel	897	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_9	37.9941515967334	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-6	True	NA	-23	True	AATAAA	-16	NA	62855886	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_1674.known	chr1	+	1308	1	FSM	ENSG00000175793.12	ENST00000339276.6	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTCTCTTCCAGTT	0	True	NA	11	True	AATAAA	-18	NA	26863148	26864456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26863100_26864500
transcript_16745.known	chr11	-	780	9	FSM	ENSG00000255717.8	ENST00000542112.5	780	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_8	80.7402277368599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGTAAACTACTGACCT	NA	False	NA	NA	False	NA	NA	NA	62855914	62852257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62855132_62855217_62855864
transcript_16748.nic	chr11	-	1018	9	FSM	ENSG00000255717.8	ENST00000686081.1	1018	9	-1	1	0	0	multi-exon	FALSE	canonical	3	36	junction_5	75.8580088059263	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-6	True	NA	-23	True	AATAAA	-16	NA	62855886	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62855132_62855217_62855423_62855467_62855864
transcript_16752.known	chr11	-	1782	9	FSM	ENSG00000255717.8	ENST00000667655.1	1782	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_8	44.4576694733316	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	NA	False	NA	-36	True	AATAAA	-3	NA	62855927	62852000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_16757.known	chr11	-	1785	9	FSM	ENSG00000255717.8	ENST00000660547.1	1785	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_8	39.496835316263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	-6	True	NA	-25	True	AATAAA	-14	NA	62855886	62851989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_1677.nnic	chr1	+	1531	10	NNC	ENSG00000090273.14	novel	1792	9	NA	NA	-44	211	at_least_one_novel_splicesite	TRUE	canonical	3	118	junction_2	1232.93480047496	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTGTGTCCTCTCTTG	NA	False	NA	14	True	ATTAAA	-15	NA	26921698	26946395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_26921930_26924088_26924167_26934248_26934420_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_16784.known	chr11	-	1158	1	FSM	ENSG00000255717.8	ENST00000668048.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	2735	False	NA	-23	True	AATAAA	-16	NA	62853145	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852000_62853100
transcript_16785.known	chr11	-	2345	7	FSM	ENSG00000255717.8	ENST00000661936.1	2345	7	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	25.9599049818497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	-5	True	NA	-36	True	AATAAA	-3	NA	62855885	62852000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132
transcript_16786.known	chr11	-	1513	10	FSM	ENSG00000255717.8	ENST00000658540.1	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	26.1958436058513	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-5	True	NA	-23	True	AATAAA	-16	NA	62855885	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_16787.known	chr11	-	897	11	FSM	ENSG00000255717.8	ENST00000541578.6	897	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	56.6428283192144	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	392	False	NA	-23	True	AATAAA	-16	NA	62855488	62851987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_16788.known	chr11	-	1038	9	ISM	ENSG00000255717.8	ENST00000537869.6	1069	10	425	4	0	0	3prime_fragment	FALSE	canonical	3	36	junction_5	57.7666372138798	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCCTGTTTACTTTTTT	420	False	NA	-26	True	AATAAA	-13	NA	62855460	62851990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_16789.known	chr11	-	3771	2	FSM	ENSG00000255717.8	ENST00000656268.1	3771	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTACATAGTCCTGTTT	NA	False	NA	-34	True	AATAAA	-5	NA	62855898	62851998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_62852682_62852810
transcript_16792.known	chr11	+	2222	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	999.829712773858	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	3	True	NA	31	True	AATAAA	-21	NA	62856110	62888860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16793.nic	chr11	+	2331	12	NIC	ENSG00000168003.18	novel	2222	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	124	junction_2	1014.87149371747	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	NA	False	NA	31	True	AATAAA	-21	NA	62855998	62888860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_62856382_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16795.known	chr11	+	2197	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1089.74353643718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	3	True	NA	51	True	AATAAA	-41	NA	62856110	62888880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16796.known	chr11	+	2084	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	712.865548332924	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	9	True	NA	46	True	AATAAA	-36	NA	62856167	62888875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16799.known	chr11	+	1993	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	815.77693029406	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	36	False	NA	24	True	AATAAA	-14	NA	62856143	62888853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_168.known	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3450	junction_1	1852.2667700685	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
transcript_16807.known	chr11	+	1905	9	FSM	ENSG00000168003.18	ENST00000681657.1	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_2	263.230768528301	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-2	True	NA	51	True	AATAAA	-41	NA	62880895	62888880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16811.known	chr11	+	1413	9	FSM	ENSG00000168003.18	ENST00000536981.6	1413	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	934.087121204441	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-24	True	NA	51	True	AATAAA	-41	NA	62881698	62888880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62881759_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16816.known	chr11	+	1975	8	FSM	ENSG00000168003.18	ENST00000680297.1	1975	8	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_2	270.120305774736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAAATAGGGTGTTTT	6855	False	NA	-24	True	TTTAAA	-35	NA	62880862	62888805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134
transcript_16820.known	chr11	+	2265	11	FSM	ENSG00000168003.18	ENST00000680729.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	999.37618542769	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	NA	False	NA	51	True	AATAAA	-41	NA	62856003	62888880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881880_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16821.known	chr11	+	2227	11	FSM	ENSG00000168003.18	ENST00000681467.1	2227	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	947.131801810075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-6	True	NA	51	True	AATAAA	-41	NA	62856101	62888880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62856454_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16822.known	chr11	+	1512	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_1	265.368438521361	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	-24	True	NA	16	True	AATAAA	-6	NA	62881698	62888845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_16823.known	chr11	+	749	3	FSM	ENSG00000257002.1	ENST00000543624.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	NA	False	NA	16	True	AATAAA	-16	NA	62909545	62918361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_62909616_62910602_62910846_62917925
transcript_16824.nnic	chr11	+	1129	3	NNC	ENSG00000257002.1	novel	749	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	NA	False	NA	16	True	AATAAA	-16	NA	62909520	62918361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_62909971_62910602_62910846_62917925
transcript_16828.known	chr11	-	3042	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	15.6792856980157	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-3	True	NA	-2	True	ATTAAA	-16	NA	63491167	63461403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
transcript_16829.known	chr11	-	1166	6	FSM	ENSG00000168004.10	ENST00000301790.4	1166	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	23.0182536261985	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGACCCACAGACTCTC	585	False	63491216	NA	False	AATATA	-6	NA	63491194	63463336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490364_63490886
transcript_1683.known	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	FALSE	canonical	3	3016	junction_8	98.7142340293435	3982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	-12	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_16830.nnic	chr11	-	2785	5	NIC	ENSG00000168004.10	novel	3042	6	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	25.4202183310844	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	763	False	NA	-2	True	ATTAAA	-16	NA	63491016	63461403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_63463596_63466109_63466373_63468356_63468466_63490242_63490334_63490886
transcript_16832.nnic	chr11	-	2782	5	NIC	ENSG00000168004.10	novel	3042	6	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	28.2001773044071	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	763	False	NA	-2	True	ATTAAA	-16	NA	63491016	63461403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_63463596_63466109_63466373_63488870_63488977_63490242_63490334_63490886
transcript_16834.known	chr11	-	571	4	FSM	ENSG00000168004.10	ENST00000394615.2	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.5058680596133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTACTGACACAAGCAAA	-11	True	NA	NA	False	NA	NA	NA	63490965	63463475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63490886
transcript_16836.known	chr11	-	2599	4	FSM	ENSG00000168004.10	ENST00000536887.5	2599	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	32.7448045073142	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	15	True	NA	-2	True	ATTAAA	-16	NA	63490939	63461403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63463596_63466109_63466373_63490242_63490334_63490886
transcript_16838.known	chr11	+	1425	9	FSM	ENSG00000133317.16	ENST00000340246.10	1425	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.06088896120033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTCTCATCTAGCAA	18	False	NA	10	True	AATAAA	-20	NA	63506362	63516774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63506528_63508552_63508642_63508774_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
transcript_16840.known	chr11	+	1667	8	FSM	ENSG00000133317.16	ENST00000255684.10	1667	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	8.7458444942937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTCGTTCTCAT	-30	True	NA	3	True	AATAAA	-13	NA	63506083	63516767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63506528_63508552_63508642_63508777_63508992_63509777_63509898_63510462_63510502_63511751_63511841_63515562_63515714_63516246
transcript_16841.nnic	chr11	+	876	5	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7331	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	17.4928556845359	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	8541	False	NA	5	True	AATAAA	-19	NA	63529476	63546458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_63529602_63536814_63536878_63539515_63539625_63544620_63544890_63546148
transcript_16842.nnic	chr11	+	852	5	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7325	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	19.4615004560286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	8547	False	NA	5	True	AATAAA	-19	NA	63529482	63546458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_63529584_63536814_63536878_63539515_63539625_63544620_63544890_63546148
transcript_16843.nnic	chr11	+	813	4	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7331	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	8.83176086632785	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	8541	False	NA	5	True	AATAAA	-19	NA	63529476	63546458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_63529602_63539515_63539625_63544620_63544890_63546148
transcript_16844.known	chr11	+	758	4	FSM	ENSG00000133321.11	ENST00000255688.8	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	13.8884444373331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	-3	True	NA	5	True	AATAAA	-19	NA	63536807	63546458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63536878_63539515_63539625_63544620_63544890_63546148
transcript_16849.known	chr11	-	1075	5	FSM	ENSG00000176485.13	ENST00000415826.3	1075	5	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	335.109310524193	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCGGCTATAAGGAAATT	2	True	NA	NA	False	AAAAAG	-1	NA	63614433	63574461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
transcript_16851.known	chr11	-	678	4	FSM	ENSG00000176485.13	ENST00000394613.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	554.885173306654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATAAGGCTTATTTT	385	False	NA	1	True	NA	NA	NA	63614158	63574849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63575047_63590099_63590369_63598060_63598114_63613999
transcript_16854.known	chr11	-	2594	4	FSM	ENSG00000176485.13	ENST00000323646.9	2594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_3	71.2569684701472	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGATACATTCAAAATATAA	1	True	NA	NA	False	ATTAAA	-29	NA	63614369	63573194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999
transcript_16858.known	chr11	-	6899	13	FSM	ENSG00000184743.13	ENST00000398868.8	6899	13	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_7	10.8384603252594	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCTGTGTTTTCTTTC	35	True	NA	-11	True	AATAAA	-14	NA	63671376	63624086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
transcript_16860.known	chr11	+	2645	8	FSM	ENSG00000133318.14	ENST00000356000.7	2645	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1057.73213305927	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	-1	True	NA	44	True	AATAAA	-21	NA	63681449	63759891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63704850_63704908_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_16862.known	chr11	+	2532	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	0	0	0	0	multi-exon	FALSE	canonical	3	2108	junction_6	115.511062481286	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	-1	True	NA	38	True	AATAAA	-15	NA	63681499	63759885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_16865.known	chr11	+	2524	6	FSM	ENSG00000133318.14	ENST00000341307.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	927.957197288754	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	-5	True	NA	35	True	AATAAA	-12	NA	63681445	63759882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63758155
transcript_16871.known	chr11	+	1407	4	FSM	ENSG00000133318.14	ENST00000354497.4	1407	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1048.44784748164	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAAAAATAACCTGCA	72	False	NA	-24	True	AATAAA	-36	NA	63681572	63759089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63681779_63749990_63750199_63756111_63756171_63758155
transcript_16875.known	chr11	+	3649	8	FSM	ENSG00000110583.13	ENST00000377793.9	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	27.3167362917434	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	8	True	NA	14	True	AATAAA	-15	NA	63939001	63957319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_16879.known	chr11	+	958	7	FSM	ENSG00000110583.13	ENST00000534965.5	958	7	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_2	59.6703909452214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGAAAGGGAGAGGG	2	True	NA	NA	False	NA	NA	NA	63938995	63954675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63939103_63945839_63945936_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_16881.known	chr11	+	577	5	FSM	ENSG00000110583.13	ENST00000539656.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	64.9629702215039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGCCAGGCTGCGCCCT	8	True	NA	NA	False	NA	NA	NA	63939001	63954586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63953971_63954050_63954337
transcript_16882.nnic	chr11	+	878	3	NNC	ENSG00000110583.13	novel	4707	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	NA	False	NA	14	True	AATAAA	-15	NA	63938969	63957319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_63939103_63945839_63946222_63956956
transcript_16883.known	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	23.4486673395313	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	12	True	NA	-8	True	AATAAA	-16	NA	64166113	63998557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_16887.known	chr11	-	431	3	FSM	ENSG00000133315.12	ENST00000542105.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTACTGTCTGAGCT	NA	False	NA	-10	True	AATAAA	-14	NA	63999222	63998559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_63998688_63998837_63998873_63998954
transcript_16891.known	chr11	+	1259	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	713.030153640083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTCGTTGGGTTC	5	True	NA	NA	False	NA	NA	NA	63986841	63997850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_16901.known	chr11	+	494	2	FSM	ENSG00000176340.4	ENST00000314133.4	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	3016	junction_1	0	1231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	14	True	NA	48	True	AATAAA	-17	NA	63974619	63976543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63974795_63976224
transcript_16902.known	chr11	+	1701	7	FSM	ENSG00000167770.13	ENST00000538426.6	1701	7	0	0	0	0	multi-exon	FALSE	canonical	3	1737	junction_4	226.761744765048	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	3	True	NA	26	True	AATAAA	-18	NA	63986437	63998412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_16903.known	chr11	+	553	4	FSM	ENSG00000167770.13	ENST00000536443.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	1088.23741282253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGTGGAAACAGTAT	34	False	NA	NA	False	AATAAA	-37	NA	63986468	63990632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63990286
transcript_16907.known	chr11	+	2140	14	FSM	ENSG00000168439.17	ENST00000305218.9	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	2474	junction_8	241.276143691814	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGGCCTTGAGTG	-18	True	NA	37	True	AATAAA	-25	NA	64186170	64204543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_16910.known	chr11	+	1900	14	FSM	ENSG00000168439.17	ENST00000538945.5	1900	14	0	0	0	0	multi-exon	FALSE	canonical	1	94	junction_2	782.061439194234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTATTTGGGGCA	15	True	NA	-98	True	NA	NA	NA	64186203	64204408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64186271_64193077_64193288_64194260_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_16929.known	chr11	-	968	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	96.3497031968571	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATCATCCTGTAGCT	-13	True	NA	-16	True	TATAAA	-45	NA	64226186	64223815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_16930.nnic	chr11	-	892	8	NNC	ENSG00000149743.14	novel	968	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	91.2856025038439	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAAGAACTCGTTTG	25	True	NA	-42	True	AATAAA	-34	NA	64226148	64223841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226061
transcript_16931.nic	chr11	-	881	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_7	91.6225620551566	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAAGAACTCGTTTG	8113	False	NA	-42	True	AATAAA	-34	NA	64226266	64223841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226190
transcript_16936.known	chr11	-	865	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	104.007611900925	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	23	True	NA	1	True	AAAAAG	-45	NA	64226150	64223798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
transcript_16942.nic	chr11	+	1006	6	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	52	junction_1	113.92032303325	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-4	True	NA	44	True	AATAAA	-17	NA	64226247	64230016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64226298_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_16944.known	chr11	+	1110	6	FSM	ENSG00000149761.9	ENST00000279206.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_3	46.8299049753467	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-13	True	NA	44	True	AATAAA	-17	NA	64226273	64230016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64226428_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_16948.known	chr11	-	1726	6	FSM	ENSG00000149743.14	ENST00000539436.5	1726	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	104.878977874501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	8150	False	NA	-30	True	TATAAA	-31	NA	64226229	64223829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785_64225870_64226049
transcript_16950.nic	chr11	+	907	5	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	153.569202641676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-4	True	NA	44	True	AATAAA	-17	NA	64226247	64230016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64226298_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_16953.known	chr11	+	986	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	125.835954718832	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	3	True	NA	35	True	AATAAA	-8	NA	64226289	64230007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_16961.known	chr11	+	1805	7	FSM	ENSG00000173511.10	ENST00000309422.7	1805	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_5	12.9196233175223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTCAGCATCTGCTGC	-25	True	NA	NA	False	AATAGA	-29	NA	64234583	64239264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237419_64237656_64238355
transcript_16962.known	chr11	+	1704	7	FSM	ENSG00000173511.10	ENST00000426086.3	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	48.6095555306659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTCAGCATCTGCTGC	-25	True	NA	NA	False	AATAGA	-29	NA	64234583	64239264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237520_64237656_64238355
transcript_16963.known	chr11	+	574	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	159.457831416334	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	11	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16964.nnic	chr11	+	671	6	NNC	ENSG00000173486.14	novel	574	6	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	357.319688794222	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	8	False	NA	18	True	AAAACA	-39	NA	64240962	64244132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_64241133_64242418_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16966.known	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	380.521747078928	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	72	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16967.known	chr11	+	1655	6	FSM	ENSG00000286264.2	ENST00000652762.2	1655	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	356.141320264863	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	11	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64242214_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16972.known	chr11	+	611	6	FSM	ENSG00000173486.14	ENST00000652094.1	611	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	399.432397283946	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAAGGAGTAAGCCTG	32	True	NA	10	True	AAAACA	-31	NA	64241664	64244124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241748_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_16976.known	chr11	+	705	5	FSM	ENSG00000173486.14	ENST00000541388.1	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	175.095688125093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAAAAACACTTA	-10	True	NA	-11	True	AAAACA	-10	NA	64241073	64244103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64241133_64242383_64242559_64243198_64243498_64243840_64243877_64243967
transcript_16986.known	chr11	-	600	4	FSM	ENSG00000173457.11	ENST00000392210.6	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2115.5019892845	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	2	True	NA	-22	True	AATAAA	-27	NA	64246193	64244479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246053
transcript_16987.known	chr11	-	989	4	FSM	ENSG00000173457.11	ENST00000309318.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	4372	junction_1	91.0396738912339	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-12	True	NA	-21	True	AATAAA	-28	NA	64246943	64244478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415
transcript_16990.nic	chr11	-	643	3	ISM	ENSG00000257086.1	ENST00000545800.1	853	4	-36	936	-36	-936	5prime_fragment	FALSE	canonical	3	42	junction_2	31	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCGCCGTCGGCTTATT	3042	False	NA	NA	False	AATAAA	-17	NA	64249530	64247874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_64248173_64248400_64248599_64249383
transcript_16992.known	chr11	+	391	2	FSM	ENSG00000256940.3	ENST00000544553.2	413	2	22	0	8	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCACAGAGGTTAATTA	6	True	NA	25	True	ATTAAA	-29	NA	64245963	64248217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64246090_64247952
transcript_16994.known	chr11	+	431	2	FSM	ENSG00000256940.3	ENST00000538355.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGATTAAATAGGAAAA	995	False	NA	-15	True	AATGAA	-39	NA	64247053	64248177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64247260_64247952
transcript_16995.nic	chr11	+	1003	6	ISM	ENSG00000149782.13	ENST00000325234.5	3946	29	14345	0	2540	0	3prime_fragment	FALSE	canonical	3	513	junction_1	20.8269056751117	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGCAGTGTGATTT	2707	False	NA	27	True	AATAAA	-16	NA	64265919	64267923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352
transcript_16998.nic	chr11	+	2081	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	50.7229368878677	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	-2	True	NA	15	True	AATAAA	-19	NA	64284803	64289494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_16999.nic	chr11	+	1972	8	NIC	ENSG00000173264.15	novel	1485	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	60.9027327559516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	-2	True	NA	12	True	AATAAA	-16	NA	64284803	64289491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_17.known	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	854	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00046_+_0_500
transcript_170.known	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_3	1474.61759110625	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
transcript_17000.nic	chr11	+	1932	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	24	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	66.1133843622964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	-14	True	NA	15	True	AATAAA	-19	NA	64284834	64289494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64285263_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_17009.known	chr11	+	1478	7	FSM	ENSG00000173264.15	ENST00000377702.8	1478	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	80.3839743564184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	9	True	NA	15	True	AATAAA	-19	NA	64285256	64289494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288339_64288469_64288602_64288722_64289036
transcript_17012.known	chr11	+	2166	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	13.2245562832516	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	-30	True	NA	15	True	AATAAA	-19	NA	64285847	64289494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_17013.known	chr11	+	1485	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	47.1616605117146	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	210	False	NA	12	True	AATAAA	-16	NA	64286419	64289491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_17018.known	chr11	-	631	5	FSM	ENSG00000002330.14	ENST00000394531.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	171.689217774443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGATCGGAACTTGGGC	37	True	NA	NA	False	NA	NA	NA	64284653	64270255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64270338_64271612_64271804_64276903_64277044_64284181_64284377_64284630
transcript_17019.known	chr11	-	929	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	62.9655990733565	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	25	True	NA	-3	True	AATAAA	-19	NA	64284665	64269829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
transcript_1702.known	chr1	-	2125	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	15.7735714267745	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTTACTTTTCTAATT	-11	True	NA	-16	True	AATAAA	-17	NA	26900467	26890487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
transcript_17020.known	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	2.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	477	False	NA	-3	True	AATAAA	-19	NA	64284639	64269829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64270338_64271612_64271804_64284181
transcript_17021.known	chr11	+	2283	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	87.6863095864394	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGGTGTCATTG	17	False	NA	20	True	AATATA	-19	NA	64306226	64316743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
transcript_17027.known	chr11	-	561	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_2	1975.4257487663	3033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-9	True	NA	-88	True	ATTAAA	-12	NA	64317558	64316694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
transcript_17028.known	chr11	-	659	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	4253	junction_2	79	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGCGGTTTCTCTTTGC	-4	True	NA	-89	True	ATTAAA	-11	NA	64317553	64316695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64317148_64317263_64317366_64317448
transcript_17029.known	chr11	-	704	2	FSM	ENSG00000173113.7	ENST00000535126.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	4411	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	563	False	NA	-84	True	ATTAAA	-16	NA	64317510	64316690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64317148_64317263
transcript_17034.known	chr11	+	860	6	FSM	ENSG00000126432.14	ENST00000265462.9	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	2847	junction_3	304.306030173574	3494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	-57	True	NA	26	True	AATAAA	-20	NA	64318120	64321811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64318387_64319733_64319869_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_17043.known	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	1429.73467818333	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	4	True	NA	-45	True	NA	NA	NA	64318181	64321740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
transcript_17045.nnic	chr11	+	749	5	NIC	ENSG00000126432.14	novel	860	6	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	288	junction_1	1371.03254884777	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	-81	True	NA	26	True	AATAAA	-20	NA	64318096	64321811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_64318387_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_17050.known	chr11	+	463	4	FSM	ENSG00000126432.14	ENST00000347941.4	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	1533.21803914367	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGGGGCCCTGCAA	4	True	NA	-43	True	NA	NA	NA	64318181	64321742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64318387_64320864_64320904_64321006_64321069_64321585
transcript_17052.nnic	chr11	-	761	4	NNC	ENSG00000236935.2	novel	563	3	NA	NA	-660	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTAGGCTTCTTCCT	3	True	NA	2	True	AATAAA	-18	NA	64340787	64325049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_64325332_64327483_64327537_64339899_64340079_64340540
transcript_17054.known	chr11	+	779	2	FSM	ENSG00000168071.22	ENST00000472524.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGCTCTGTCTGTT	29	False	NA	18	True	AATAAA	-18	NA	64355342	64357531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_64355629_64357038
transcript_17055.known	chr11	-	2983	16	FSM	ENSG00000068831.19	ENST00000377494.5	2983	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	66.8966034680054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	9866	False	NA	-2	True	AATAAA	-24	NA	64743789	64726910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64727132_64727295_64727364_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793
transcript_17057.nic	chr11	-	677	4	ISM	ENSG00000068831.19	ENST00000421556.5	2168	17	14150	0	5294	0	3prime_fragment	FALSE	canonical	3	46	junction_1	4.78423336480244	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	NA	False	NA	-2	True	AATAAA	-24	NA	64729972	64726910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761
transcript_17058.known	chr11	-	2174	4	FSM	ENSG00000068831.19	ENST00000394430.5	2174	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	21.013223349966	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGAGGGTCATGTTG	9066	False	NA	-4	True	AATAAA	-15	NA	64744589	64740867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793
transcript_17059.known	chr11	-	2866	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	5.6037185912447	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTACTCCTCTTTGT	-3	True	NA	-9	True	AATAAA	-17	NA	64759974	64746397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
transcript_17062.known	chr11	-	2854	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	274.999128786499	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	363	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_17063.known	chr11	-	3282	13	FSM	ENSG00000168066.21	ENST00000377390.8	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	144.805113284488	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-10	True	NA	-22	True	AATAAA	-22	NA	64778542	64764605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_17065.known	chr11	-	2778	12	FSM	ENSG00000168066.21	ENST00000448404.5	2778	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	343.462606383098	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	363	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64776497_64776627_64778361
transcript_17066.known	chr11	-	983	2	FSM	ENSG00000168066.21	ENST00000463343.1	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATGACAAAA	8	True	NA	NA	False	NA	NA	NA	64778763	64776045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64776627_64778361
transcript_17067.known	chr11	-	4453	5	FSM	ENSG00000110047.18	ENST00000320631.8	4453	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	11.3468057179102	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGGTCCTGAAAGCTT	0	True	NA	NA	False	ATTAAA	-21	NA	64878621	64851641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64854858_64855321_64855487_64859923_64860337_64874420_64874519_64878060
transcript_17070.known	chr11	-	2031	3	FSM	ENSG00000110046.13	ENST00000461701.5	2031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAGAAAAAAAGAAA	1	True	NA	NA	False	NA	NA	NA	64917206	64912610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64913137_64913265_64914501_64916936
transcript_17071.known	chr11	-	752	4	FSM	ENSG00000149735.7	ENST00000279168.7	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.78423336480244	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTTTATTAAGTCT	-1	True	NA	-4	True	AATAAA	-17	NA	64935893	64934470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64934875_64934990_64935176_64935357_64935461_64935833
transcript_17072.known	chr11	-	2066	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTGCCTAGTTACTT	-1	True	NA	-1	True	AATAAA	-17	NA	64996971	64987944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_64989813_64994447_64994550_64996875
transcript_17074.known	chr11	+	1908	8	FSM	ENSG00000110025.13	ENST00000377244.8	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	38.186438451794	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTAATTCATTTAGTA	-19	True	NA	16	True	AATAAA	-17	NA	65027438	65040572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65038571_65038830_65039685
transcript_17077.known	chr11	+	830	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	1271.76548152558	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	36	True	NA	18	True	AATAAA	-17	NA	65014179	65022184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
transcript_17079.known	chr11	+	932	5	FSM	ENSG00000213465.8	ENST00000246747.9	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	3062	junction_4	164.746775385742	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	16	True	NA	18	True	AATAAA	-17	NA	65014159	65022184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720
transcript_17081.known	chr11	+	795	4	FSM	ENSG00000213465.8	ENST00000533729.1	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	1552.79754708147	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAACCGCTCCTTGCC	-18	True	NA	-6	True	NA	NA	NA	65014191	65022160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65021720
transcript_17082.known	chr11	+	1228	3	FSM	ENSG00000213465.8	ENST00000524585.1	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	3424	junction_1	32.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCCCCCATATACCCTT	27	True	NA	-80	True	AAAAAG	-32	NA	65014170	65019585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65014273_65018363_65018475_65018570
transcript_17085.known	chr11	-	495	6	FSM	ENSG00000168060.16	ENST00000533842.5	495	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.30479294709987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTAGTCACATTCCCGGG	26	False	NA	NA	False	NA	NA	NA	65047861	65045429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646_65047739_65047841
transcript_17087.known	chr11	-	800	5	FSM	ENSG00000168060.16	ENST00000526516.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	6.51920240520265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCACCCTGAGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	65047937	65045303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646
transcript_17089.known	chr11	-	566	4	FSM	ENSG00000168060.16	ENST00000532802.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.78888096369861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGCGGCAGCCACCCT	1	True	NA	NA	False	NA	NA	NA	65047886	65045312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65047646
transcript_17091.known	chr11	-	2475	6	FSM	ENSG00000146670.10	ENST00000275517.8	2475	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	40.8900966005217	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTGTTTCTTTTATT	24	True	NA	-5	True	ATTAAA	-18	NA	65084040	65077452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65079188_65079352_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_17094.known	chr11	-	1012	5	FSM	ENSG00000146670.10	ENST00000404147.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	35.2845575287547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGACTCTCCCTCCT	17	True	NA	NA	False	NA	NA	NA	65084047	65079087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_17097.known	chr11	+	1382	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	19.7411824801425	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	-4	True	NA	12	True	AATAAA	-18	NA	65084221	65088398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_171.known	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	5737	junction_1	1441.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV7_-_56098_78841_78964_114680
transcript_1710.nnic	chr1	-	1892	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	62	-3	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_4	130.110529935129	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	38	False	NA	-18	True	NA	NA	NA	26960406	26949564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
transcript_17100.nic	chr11	+	1366	8	NIC	ENSG00000162300.13	novel	1382	8	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_1	78.0601547212279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	-6	True	NA	12	True	AATAAA	-18	NA	65084219	65088398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65084361_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_17104.known	chr11	+	2094	8	FSM	ENSG00000149809.17	ENST00000530650.5	2094	8	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	24.0874257992143	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	29	False	NA	20	True	AATGAA	-15	NA	65111901	65116230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_17110.known	chr11	+	478	2	FSM	ENSG00000162300.13	ENST00000525509.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGAGTCTCCTCTGTGGC	-3	True	NA	NA	False	AATAAA	-25	NA	65084222	65085012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65084379_65084690
transcript_17111.known	chr11	+	426	2	FSM	ENSG00000149823.9	ENST00000528050.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGCCCCCATTCTCCC	-10	True	NA	NA	False	NA	NA	NA	65096213	65097158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65096479_65096997
transcript_17112.known	chr11	-	3038	16	FSM	ENSG00000162298.19	ENST00000377190.8	3038	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	31.2761179745114	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	3	True	NA	-29	True	AATAAA	-16	NA	65134519	65127278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130176_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_17117.known	chr11	-	506	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	5849	junction_4	460.759427467306	6450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-3	True	NA	-4	True	AATAAA	-21	NA	65122134	65120629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
transcript_17119.known	chr11	+	2065	4	FSM	ENSG00000149792.9	ENST00000524482.5	2065	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	334.799774326222	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	1425	False	NA	19	True	ATTAAA	-29	NA	65122182	65127356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122341_65124501_65124653_65125487_65125613_65125725
transcript_17120.known	chr11	+	2026	4	FSM	ENSG00000149792.9	ENST00000279242.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_2	23.2713462342761	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAACTCTTGTAACAC	-4	True	NA	34	True	ATTAAA	-44	NA	65122320	65127371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122425_65124501_65124653_65125487_65125613_65125725
transcript_17122.known	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_1	3024.34018515701	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	8148	False	NA	-12	True	AATAAA	-13	NA	65122153	65120637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
transcript_17123.known	chr11	+	688	3	FSM	ENSG00000149792.9	ENST00000533943.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	375.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGAGTGCAGTGGCAT	30	False	NA	NA	False	NA	NA	NA	65122354	65126178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122465_65125487_65125613_65125725
transcript_17124.known	chr11	+	518	3	FSM	ENSG00000149792.9	ENST00000534078.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	364.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTGCTTGCATAAAGGA	-14	True	NA	NA	False	NA	NA	NA	65122310	65126004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65122425_65125487_65125613_65125725
transcript_17126.known	chr11	-	533	3	FSM	ENSG00000149806.11	ENST00000434372.2	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	5849	junction_2	572.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTGGTTATCAGCTT	8124	False	NA	NA	False	NA	NA	NA	65122177	65121282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65121645_65121738_65121822_65122089
transcript_17127.known	chr11	-	1484	1	FSM	ENSG00000149806.11	ENST00000531357.1	1484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCGCATTGTTTCATCT	8184	False	NA	-8	True	AATAAA	-17	NA	65122117	65120633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120600_65122100
transcript_17128.known	chr11	-	697	4	FSM	ENSG00000149806.11	ENST00000531743.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	6623	junction_2	167.453476125958	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	8244	False	NA	-4	True	AATAAA	-21	NA	65122057	65120629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738
transcript_17129.known	chr11	-	538	5	FSM	ENSG00000149806.11	ENST00000527548.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2973.57246212363	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	8188	False	NA	-5	True	AATAAA	-20	NA	65122113	65120630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122035
transcript_1713.known	chr1	-	1855	4	FSM	ENSG00000175707.10	ENST00000320567.6	1855	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	58.6363558061227	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-24	True	NA	-15	True	NA	NA	NA	26960468	26949561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_26950152_26950681_26950757_26951341_26952413_26960349
transcript_17130.known	chr11	+	991	7	FSM	ENSG00000204710.2	ENST00000377185.2	991	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGCCCACTGACTGAC	NA	False	NA	NA	False	NA	NA	NA	65170153	65173244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65170262_65171326_65171500_65171942_65172002_65172245_65172332_65172433_65172606_65172683_65173015_65173182
transcript_17134.known	chr11	+	3083	22	FSM	ENSG00000014216.16	ENST00000533820.5	3083	22	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	175.287286056523	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	NA	False	NA	26	True	AATAAA	-22	NA	65181193	65212006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65181411_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_17136.known	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	187.010470561873	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	28	False	NA	21	True	AATAAA	-17	NA	65181744	65212001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_17137.known	chr11	+	2952	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	103.806356439229	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	-24	True	NA	26	True	AATAAA	-22	NA	65181927	65212006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_17138.nic	chr11	+	3150	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	186.807660551746	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	-10	True	NA	26	True	AATAAA	-22	NA	65182024	65212006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65182309_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_17139.nic	chr11	+	2973	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_1	182.756309003891	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	-15	True	NA	26	True	AATAAA	-22	NA	65182434	65212006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65182542_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_1714.nnic	chr1	-	1796	4	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	135.775140909111	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	-27	True	NA	-18	True	NA	NA	NA	26960471	26949564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26960408
transcript_17140.nic	chr11	+	2977	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	188.227801388157	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	2	True	NA	26	True	AATAAA	-22	NA	65182451	65212006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_65182563_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_17144.nic	chr11	+	1531	10	ISM	ENSG00000014216.16	ENST00000279247.11	2952	22	-119	23100	9	217	5prime_fragment	FALSE	canonical	3	462	junction_1	132.471380556959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATGCTTGACTCACCG	11	False	NA	NA	False	ATTAAA	-20	NA	65181808	65188906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585
transcript_17147.nic	chr11	+	1535	7	ISM	ENSG00000014216.16	ENST00000279247.11	2952	22	3	24100	0	-94	5prime_fragment	FALSE	canonical	3	462	junction_1	160.894029997663	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGCCTGCTGGAAGC	-21	True	NA	NA	False	AAAAAG	-9	NA	65181930	65187906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214
transcript_1715.nnic	chr1	-	1902	4	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.79393923934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATTGGTATCTGCCTGC	3	True	NA	-20	True	NA	NA	NA	26960441	26949566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_26950231_26950681_26950757_26951341_26952413_26960349
transcript_17151.known	chr11	+	3086	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	58.4202661753608	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	12	True	NA	7	True	AATAAA	-3	NA	65182461	65211987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_17158.known	chr11	+	3544	18	FSM	ENSG00000014138.9	ENST00000265465.8	3544	18	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	13.6878194532249	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCTGTTTTATTTCA	-8	True	NA	20	True	AGTAAA	-21	NA	65261961	65298685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297119
transcript_17159.known	chr11	+	1963	2	FSM	ENSG00000149798.5	ENST00000279249.3	1963	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCAAGGGACCAACAGC	2	True	NA	4	True	AATAAA	-15	NA	65314865	65322417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65314955_65320543
transcript_17161.known	chr11	+	3714	11	FSM	ENSG00000133884.10	ENST00000528416.6	3714	11	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_4	94.8791336385404	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCCCAAGCATGCAG	-10	True	NA	3	True	AATAAA	-18	NA	65333851	65354262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_17162.known	chr11	+	940	4	FSM	ENSG00000133884.10	ENST00000444314.6	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_1	52.7825728815866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACTAGGGAAGCTGAG	-10	True	NA	NA	False	ATTAAA	-39	NA	65333851	65342002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398
transcript_17163.nic	chr11	+	2252	3	ISM	ENSG00000133884.10	ENST00000444314.6	940	4	20	-1007	-1	1007	intron_retention	FALSE	canonical	3	796	junction_1	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCATGGCCGGCCACGG	10	True	NA	NA	False	NA	NA	NA	65333871	65343009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_65333919_65340384_65340546_65340965
transcript_17164.known	chr11	+	366	2	FSM	ENSG00000126391.14	ENST00000531296.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGAAGTCAGAGGCTC	-19	True	NA	NA	False	AAGAAA	-28	NA	65386620	65387261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65386762_65387036
transcript_17165.known	chr11	+	1519	2	FSM	ENSG00000251562.9	ENST00000508832.2	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTTTATTAGAGAATGT	3	False	NA	7	True	AATAAA	-1	NA	65501847	65503609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65502394_65502636
transcript_17167.known	chr11	+	2636	18	FSM	ENSG00000142186.18	ENST00000270176.10	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_13	41.6216273299314	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-19	True	NA	28	True	AATAAA	-13	NA	65525082	65538704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_17168.known	chr11	+	2583	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_13	63.8618751709189	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-17	True	NA	28	True	AATAAA	-13	NA	65525084	65538704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_17169.known	chr11	+	2586	17	FSM	ENSG00000142186.18	ENST00000527009.5	2586	17	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_12	42.7832016538033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGCCACAATAAATTC	311	False	NA	-1	True	NA	NA	NA	65525412	65538675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_17170.known	chr11	-	1942	1	FSM	ENSG00000260233.3	ENST00000623234.1	1942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCCATTT	-4	True	NA	NA	False	NA	NA	NA	65570423	65568481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65568500_65570400
transcript_17172.known	chr11	+	713	4	FSM	ENSG00000173465.8	ENST00000526877.1	713	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	394.719591046043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTCCACTCTGCTCT	16	True	NA	111	True	NA	NA	NA	65570486	65571858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65570511_65570603_65570740_65570885_65570971_65571390
transcript_17173.known	chr11	+	769	4	FSM	ENSG00000173465.8	ENST00000309328.8	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	119.558446887797	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGAGTTGAGCTTGT	6	True	NA	NA	False	NA	NA	NA	65570476	65571888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65570511_65570603_65570756_65570885_65570971_65571390
transcript_17176.known	chr11	-	2517	11	FSM	ENSG00000173039.20	ENST00000406246.8	2517	11	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_2	11.0833208019979	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	-2	True	NA	-12	True	AATAAA	-17	NA	65662916	65653600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_17177.known	chr11	+	824	5	FSM	ENSG00000285533.3	ENST00000648185.2	909	5	83	2	8	-2	multi-exon	FALSE	canonical	2	3	junction_2	13.865424623862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	0	True	NA	12	True	AATAAA	-17	NA	65663085	65671716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130_65666218_65671422
transcript_17179.known	chr11	+	1697	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	10.9645894689324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGTTTCCATATT	-4	True	NA	NA	False	NA	NA	NA	65663005	65667304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
transcript_1718.known	chr1	+	994	8	FSM	ENSG00000186501.15	ENST00000486082.5	994	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	114.741235048295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCTCAGAAGCACCCT	-17	True	NA	NA	False	NA	NA	NA	27322253	27335648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_17183.known	chr11	+	2237	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_5	92.7274430695943	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	-23	True	NA	25	True	AATAAA	-17	NA	65711995	65719604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17185.known	chr11	+	2059	13	FSM	ENSG00000172977.13	ENST00000352980.8	2059	13	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	53.1467439161506	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	-1	True	NA	25	True	AATAAA	-17	NA	65712017	65719604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_1719.known	chr1	+	1665	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	101.020487471052	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	-24	True	NA	27	True	AATAAA	-15	NA	27322246	27336400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_17190.known	chr11	+	2080	13	FSM	ENSG00000172977.13	ENST00000341318.9	2080	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	93.8516855942869	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	6	True	NA	25	True	AATAAA	-17	NA	65712251	65719604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17193.known	chr11	+	1697	12	FSM	ENSG00000172977.13	ENST00000530446.5	1697	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	45.3648205347355	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTCCAAGGTCAGCTG	-7	True	NA	NA	False	NA	NA	NA	65712238	65719364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17195.known	chr11	+	745	7	FSM	ENSG00000172977.13	ENST00000527544.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	56.1053077306912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTGAATCAAATGACAGC	178	False	NA	NA	False	NA	NA	NA	65712423	65714938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820
transcript_17198.known	chr11	-	1750	5	FSM	ENSG00000172922.11	ENST00000644142.1	1750	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	155.316410916554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCATCATTTAACCAATA	6	True	NA	-47	True	NA	NA	NA	65720803	65717714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65718823_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_17199.known	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	39.9694327649962	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	11	True	NA	-5	True	AATAAA	-21	NA	65720798	65717672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
transcript_172.known	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV8001_+_0_8000
transcript_17200.known	chr11	+	1875	11	FSM	ENSG00000172977.13	ENST00000534650.5	1875	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	38.9979486640003	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGCAAAGTTCTTG	374	False	NA	24	True	AATAAA	-16	NA	65712619	65719603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_17201.known	chr11	+	2988	4	FSM	ENSG00000172818.10	ENST00000335987.8	2988	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	-4	True	NA	24	True	ATTAAA	-14	NA	65787062	65797214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045
transcript_17202.known	chr11	+	1681	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	2.38484800354236	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	3	True	NA	8	True	AATAAA	-20	NA	65833962	65853701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
transcript_17205.known	chr11	-	1813	12	FSM	ENSG00000172638.13	ENST00000531972.5	1813	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.5485422121517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	781	False	NA	-33	True	TATAAA	-21	NA	65872811	65866440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65866713_65866844_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_17206.known	chr11	-	1934	11	FSM	ENSG00000172638.13	ENST00000307998.11	1934	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	23.4190093727297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-32	True	NA	-33	True	TATAAA	-21	NA	65872800	65866440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_1721.known	chr1	+	986	7	FSM	ENSG00000186501.15	ENST00000478104.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	110.46216043917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTCAAGGTGGCCC	14	True	NA	NA	False	NA	NA	NA	27322284	27335824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_17213.known	chr11	-	860	4	FSM	ENSG00000172757.13	ENST00000524553.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5114.12481923023	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTTTTAACAACAT	5	True	NA	-166	True	NA	NA	NA	65856964	65855053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856884
transcript_17214.known	chr11	-	962	4	FSM	ENSG00000172757.13	ENST00000527344.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	5109.4110771747	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	5018	False	NA	-87	True	NA	NA	NA	65857033	65854974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856930
transcript_17215.known	chr11	-	1062	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	5050.01797576559	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCATGCTGCCAACTTC	9	True	NA	-121	True	NA	NA	NA	65857868	65855008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
transcript_17219.known	chr11	-	758	4	FSM	ENSG00000172757.13	ENST00000534769.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	1	43	junction_3	5093.85573237231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATCCCAGCAGGGGGAG	9872	False	NA	NA	False	GGGGCT	-3	NA	65861421	65855240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65861256
transcript_1722.known	chr1	+	1511	6	FSM	ENSG00000186501.15	ENST00000608611.5	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	17.0364315512375	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	-23	True	NA	27	True	AATAAA	-15	NA	27322247	27336400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_17226.known	chr11	-	761	2	FSM	ENSG00000172757.13	ENST00000525710.1	761	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCAGATATTTTCAGTT	3471	False	NA	NA	False	AAGAAA	-42	NA	65831770	65826321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65826610_65831297
transcript_17227.known	chr11	-	1245	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	0	0	0	multi-exon	FALSE	canonical	3	10777	junction_2	68.3975308196299	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTGAGACGCCTTT	0	True	NA	-35	True	NA	NA	NA	65858180	65854672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
transcript_17228.known	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10925	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	9495	False	NA	-55	True	ATTAAA	-3	NA	65858194	65854831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65856243_65858096
transcript_17230.known	chr11	-	1261	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_5	220.660120748831	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCCTCGCTCCGGGG	4618	False	NA	-23	True	AATAAA	-18	NA	65888531	65883920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_17233.known	chr11	-	1361	10	FSM	ENSG00000172500.13	ENST00000357519.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_5	50.2725902787327	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTGTCTTGGTTTAT	1	True	NA	-1	True	NA	NA	NA	65888471	65883739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_17245.known	chr11	-	1010	9	FSM	ENSG00000172500.13	ENST00000533037.5	1010	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	250.498877242993	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCGGCTGCCTCCTGCGC	-18	True	NA	-111	True	NA	NA	NA	65888490	65884008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65887599_65887727_65887933_65888133_65888333
transcript_17261.known	chr11	+	822	7	FSM	ENSG00000175550.8	ENST00000312515.7	822	7	0	0	0	0	multi-exon	TRUE	canonical	3	1525	junction_6	202.406356948919	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGCAGGACGTCAT	-4	True	NA	30	True	AATAAA	-24	NA	65919425	65921563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_17262.known	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_5	216.785608378416	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	7	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_17263.nic	chr11	-	2811	6	NIC	ENSG00000175376.9	novel	2887	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	32.3827114368146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-3	True	NA	-23	True	AATAAA	-19	NA	66002151	65996544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_17264.known	chr11	-	808	6	FSM	ENSG00000175376.9	ENST00000529964.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.1283361405006	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-18	True	NA	-9	True	ATTAAA	-16	NA	66002166	65998432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66002039
transcript_17265.known	chr11	-	889	6	FSM	ENSG00000175376.9	ENST00000527249.5	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	27.7012635090893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCCCTGGCTCTTCT	300	False	NA	NA	False	NA	NA	NA	66002176	65998566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66001909
transcript_17266.known	chr11	-	2761	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.1283361405006	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-8	True	NA	-23	True	AATAAA	-19	NA	66002156	65996544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
transcript_17267.known	chr11	-	2916	6	FSM	ENSG00000175376.9	ENST00000533544.6	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	31.6	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-9	True	NA	-23	True	AATAAA	-19	NA	66002157	65996544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66001909
transcript_17268.nic	chr11	-	1119	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	32.3827114368146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	129	False	NA	-9	True	ATTAAA	-16	NA	66002347	65998432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_17277.known	chr11	+	731	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	697.5	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	4	True	NA	30	True	AATAAA	-18	NA	66002502	66004149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002571_66003234_66003374_66003625
transcript_17278.known	chr11	+	946	3	FSM	ENSG00000175334.8	ENST00000445560.6	946	3	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	1676	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	-21	True	NA	27	True	AATAAA	-15	NA	66002227	66004146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002514_66003234_66003374_66003625
transcript_1728.nic	chr1	+	643	3	ISM	ENSG00000142765.18	ENST00000615284.1	793	4	264	5	-133	0	3prime_fragment	FALSE	canonical	3	88	junction_1	10.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	6525	False	NA	NA	False	AATAAA	-18	NA	27351338	27353932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_27351556_27353282_27353489_27353712
transcript_17280.known	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	2044.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	82	False	NA	12	True	NA	NA	NA	66002580	66004131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66003071_66003234_66003374_66003625
transcript_17283.known	chr11	+	670	3	FSM	ENSG00000175334.8	ENST00000527348.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_1	1855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGGAGTTTTCTCCC	-10	True	NA	NA	False	NA	NA	NA	66002781	66003898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66003040_66003234_66003374_66003625
transcript_17285.known	chr11	+	251	2	FSM	ENSG00000175334.8	ENST00000524663.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGGAATGGCTGAAAGACA	16	False	NA	NA	False	AAGAAA	-15	NA	66002315	66003678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002514_66003625
transcript_17286.known	chr11	+	612	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	-19	True	NA	27	True	AATAAA	-15	NA	66002479	66004146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66002571_66003625
transcript_17287.known	chr11	+	3272	22	FSM	ENSG00000087365.16	ENST00000322535.11	3272	22	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_4	195.848893577794	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCCTTGGGTTCAA	0	True	NA	NA	False	NA	NA	NA	66052363	66069308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
transcript_17290.nic	chr11	+	2676	21	ISM	ENSG00000087365.16	ENST00000322535.11	3272	22	-39	975	-6	-341	5prime_fragment	FALSE	canonical	3	1662	junction_4	190.922569383507	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGCTTCCAGGGGCGC	NA	False	NA	10	True	NA	NA	NA	66052324	66068333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147
transcript_17291.known	chr11	+	3254	21	FSM	ENSG00000087365.16	ENST00000528302.5	3254	21	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	476.389924326701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCCTTGGGTTCAA	NA	False	NA	NA	False	NA	NA	NA	66052330	66069308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
transcript_17299.known	chr11	+	1163	10	FSM	ENSG00000087365.16	ENST00000530322.5	1163	10	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	572.972905657226	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAAGGAGAGCACACTA	36	False	NA	NA	False	NA	NA	NA	66052399	66059044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057268_66057376_66058053_66058151_66058313_66058406_66058829
transcript_173.known	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV8002_+_0_8000
transcript_17300.nic	chr11	+	1014	9	ISM	ENSG00000087365.16	ENST00000322535.11	3272	22	-31	10907	2	-202	5prime_fragment	FALSE	canonical	3	1662	junction_4	149.357582666566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTAGGGATTGGAGCTG	NA	False	NA	18	True	NA	NA	NA	66052332	66058401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313
transcript_17304.known	chr11	+	1080	9	FSM	ENSG00000087365.16	ENST00000530981.1	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	705.067804806743	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAGGAAAGAGATG	1158	False	NA	24	True	AATAAA	-4	NA	66060690	66068878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067948_66068046_66068147_66068334_66068673
transcript_17305.known	chr11	-	1097	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_3	97.9339635902162	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-5	True	NA	-7	True	NA	NA	NA	66289143	66284579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_17306.known	chr11	-	943	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	460.819921444375	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-7	True	NA	-7	True	NA	NA	NA	66289145	66284579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_17308.known	chr11	+	1901	6	FSM	ENSG00000174903.16	ENST00000311481.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	77.0750283814414	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTGGCCAAGTGTGG	6	True	NA	31	True	AATAAA	-43	NA	66268638	66277492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66272364_66272461_66275803_66275936_66276043
transcript_17311.known	chr11	+	991	5	FSM	ENSG00000174903.16	ENST00000527397.1	991	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	448.347730561893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTACTGCCCTGGCTG	-3	True	NA	NA	False	NA	NA	NA	66268589	66276629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66275803_66275936_66276043
transcript_17312.known	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	117.86055791108	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-12	True	NA	-6	True	ATTAAA	-20	NA	66345119	66337332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_17314.known	chr11	-	1424	10	FSM	ENSG00000174744.14	ENST00000359957.8	1424	10	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	25.7499850173755	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	3	True	NA	-12	True	ATTAAA	-14	NA	66345104	66337338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337890_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_17320.known	chr11	-	1817	9	FSM	ENSG00000174744.14	ENST00000530238.5	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	27.1773688020014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGACTGGAATTAAAACC	18	True	NA	-42	True	NA	NA	NA	66345089	66337368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337890_66338242_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_17322.known	chr11	-	913	9	FSM	ENSG00000174744.14	ENST00000527375.5	913	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	166.043480751278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCAGGCTCCTGTGG	-5	True	NA	NA	False	NA	NA	NA	66345079	66337777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66337890_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341212_66341334_66341532_66341624_66342095_66342242_66344971
transcript_17326.known	chr11	-	2007	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCCGTTACTCTC	-12	True	NA	-3	True	AATAAA	-17	NA	66347629	66345373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66346241_66346489
transcript_17327.known	chr11	-	2474	12	FSM	ENSG00000174669.12	ENST00000540386.5	2474	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	48.5669002681136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	640	False	NA	-35	True	NA	NA	NA	66371820	66362521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366192_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_17328.known	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_9	33.3664848920228	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	5	True	NA	-34	True	NA	NA	NA	66371760	66362520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_17333.known	chr11	+	286	2	FSM	ENSG00000255468.7	ENST00000581155.5	286	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTGTGCTGACT	110	False	NA	NA	False	NA	NA	NA	66347949	66353619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66348071_66353454
transcript_17336.known	chr11	+	2974	18	FSM	ENSG00000254986.8	ENST00000531863.6	2660	18	-421	107	0	-107	multi-exon	FALSE	canonical	3	158	junction_1	80.1608245059089	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGGTGGCACGTGACAG	-7	True	NA	-88	True	NA	NA	NA	66480012	66509550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66480466_66482192_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_17341.known	chr11	+	3078	18	FSM	ENSG00000254986.8	ENST00000532677.5	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	76.5536652801162	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	-7	True	NA	19	True	AATAAA	-19	NA	66480012	66509657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66480466_66482195_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_17347.known	chr11	+	3368	17	FSM	ENSG00000174483.20	ENST00000318312.12	3368	17	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	13.0202666543355	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTTAATGGAGTTA	-11	True	NA	6	True	ATTAAA	-15	NA	66510634	66533598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
transcript_1735.known	chr1	+	2137	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	-4	True	NA	NA	False	AATAAA	-19	NA	27392621	27395814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27392738_27393793
transcript_17354.nic	chr11	+	1403	9	ISM	ENSG00000174483.20	ENST00000529766.5	1590	14	-22	5781	-3	308	5prime_fragment	FALSE	canonical	3	105	junction_1	11.399013115178	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCAGGGGGGTGCC	-15	True	NA	NA	False	NA	NA	NA	66510630	66521920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269
transcript_17355.nic	chr11	+	891	8	ISM	ENSG00000174483.20	ENST00000529766.5	1590	14	-22	7814	-3	0	5prime_fragment	FALSE	canonical	3	105	junction_1	12.1822889173302	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAATCCTACCGCCTAT	-15	True	NA	-1	True	ATTAAA	-13	NA	66510630	66519887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616
transcript_1736.known	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	42.537483470464	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-14	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_17362.known	chr11	-	922	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	677.61995248074	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-13	True	NA	-10	True	AATAAA	-13	NA	66438834	66435837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
transcript_17369.known	chr11	-	812	5	FSM	ENSG00000174547.13	ENST00000534488.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	637.909280383974	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-5	True	NA	-10	True	AATAAA	-13	NA	66438826	66435837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66437103_66437264_66437349_66437436_66438163_66438260_66438631
transcript_17370.known	chr11	-	1527	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_4	471.301654993912	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGACTTCTGCCAATAT	-27	True	NA	-18	True	AATAAA	-25	NA	66438848	66435074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
transcript_17371.nnic	chr11	-	870	5	NNC	ENSG00000174547.13	novel	922	6	NA	NA	-178	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_4	636.352496655745	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	NA	False	NA	-10	True	AATAAA	-13	NA	66439026	66435837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438781
transcript_17372.known	chr11	-	2209	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	650.941817676511	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGAGACTTCTGCC	1052	False	NA	-23	True	AATAAA	-20	NA	66466738	66435079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
transcript_17373.known	chr11	-	828	4	FSM	ENSG00000255517.7	ENST00000527092.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.7540843131393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCCTTGCCTCACAG	13	True	NA	NA	False	NA	NA	NA	66480231	66473489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66473868_66474143_66474226_66474929_66475105_66480038
transcript_17381.known	chr11	+	3585	15	FSM	ENSG00000174483.20	ENST00000526760.5	3585	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	32.1244391676607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGAGTTGCCCTGAG	1520	False	NA	21	True	ATTAAA	-30	NA	66510605	66533613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66510707_66511012_66511090_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655
transcript_17382.known	chr11	-	944	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTCTGGAGAGTGC	13	True	NA	NA	False	ATTAAA	-24	NA	66480231	66477345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66478097_66480038
transcript_17383.known	chr11	+	2882	21	FSM	ENSG00000248746.6	ENST00000513398.2	2882	21	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_11	34.7273307353157	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	-2	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_17388.nnic	chr11	-	1901	14	NNC	ENSG00000174080.12	novel	2044	13	NA	NA	-7722	0	intron_retention	FALSE	canonical	2	7	junction_12	5.71927086013573	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGAGTGTGGTATAAATG	NA	False	NA	-5	True	AATAAA	-13	NA	66576601	66563469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66576003_66576120_66576521
transcript_17393.known	chr11	+	1214	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	79.8925298543651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	-2	True	NA	21	True	NA	NA	NA	66593200	66605998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_17394.known	chr11	+	1066	8	FSM	ENSG00000173992.9	ENST00000533244.6	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	29.4465964215956	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	2	True	NA	42	True	AATGAA	-21	NA	66593184	66606019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_17396.known	chr11	+	942	8	FSM	ENSG00000173992.9	ENST00000310190.8	942	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.1486954446953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGGACTTTGCCTGCC	38	False	NA	-58	True	NA	NA	NA	66593240	66605919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593609_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_17401.nic	chr11	+	1719	7	NIC	ENSG00000173992.9	novel	1214	8	NA	NA	-231	0	intron_retention	FALSE	canonical	3	9	junction_4	86.0860357755865	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	NA	False	NA	42	True	AATGAA	-21	NA	66592921	66606019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_17403.known	chr11	+	1196	7	FSM	ENSG00000173992.9	ENST00000530384.5	1196	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	26.0362994469047	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCAGAGGGACTTT	NA	False	NA	-65	True	NA	NA	NA	66593152	66605912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_17407.nic	chr11	+	2155	6	NIC	ENSG00000173992.9	novel	1196	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	204	junction_3	20.0858158908221	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	NA	False	NA	42	True	AATGAA	-21	NA	66593152	66606019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_66593301_66593641_66593715_66599115_66600550_66605338_66605417_66605488_66605593_66605701
transcript_1741.known	chr1	-	812	5	FSM	ENSG00000126709.16	ENST00000361157.11	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.26917420765551	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCTGCTGTCAATCA	-2	True	NA	-15	True	AATAAA	-17	NA	27672192	27666063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669244_27669347_27672122
transcript_17410.known	chr11	+	872	3	FSM	ENSG00000173992.9	ENST00000526066.5	872	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGGGTTTGAGTCAA	7	True	NA	NA	False	NA	NA	NA	66593189	66599803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66593301_66593641_66593715_66599115
transcript_1742.known	chr1	+	3579	9	FSM	ENSG00000009780.16	ENST00000373954.11	3579	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_6	7.27044530960793	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAATTGTTGGATTTTGT	-14	True	NA	10	True	AATAAA	-18	NA	27725960	27763116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27749067_27749155_27755194_27755331_27759525_27759628_27760494
transcript_17425.known	chr11	+	1607	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	75.2964511484808	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	7	True	NA	16	True	AATAAA	-16	NA	66638702	66646468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
transcript_17428.known	chr11	+	1763	4	FSM	ENSG00000173933.21	ENST00000408993.6	1763	4	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	179.611308725877	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTCAACTTAGGGT	5	True	NA	0	True	NA	NA	NA	66638671	66646452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638894_66639699_66640124_66643449_66644141_66646026
transcript_1743.known	chr1	+	2273	8	FSM	ENSG00000009780.16	ENST00000373949.5	2273	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	8.99886614172778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	7	True	NA	NA	False	NA	NA	NA	27726027	27761964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27755194_27755331_27759525_27759628_27760494
transcript_17431.known	chr11	-	1806	4	FSM	ENSG00000173914.12	ENST00000310046.9	1806	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	52.4933858267454	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTATGTTTGTCTT	-44	True	NA	-4	True	AATAAA	-18	NA	66677887	66664997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66665579_66668614_66669292_66676667_66677092_66677763
transcript_17433.known	chr11	+	5367	3	FSM	ENSG00000239306.5	ENST00000310137.5	5367	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_2	4.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTGGTGGCATGCA	6	True	NA	NA	False	AAGAAA	-13	NA	66616629	66629934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66617058_66624213_66625679_66626460
transcript_17438.known	chr11	+	921	3	FSM	ENSG00000173933.21	ENST00000398692.8	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	200.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	2	True	NA	16	True	AATAAA	-16	NA	66638697	66646468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66646026
transcript_17439.known	chr11	+	654	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	286.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	22	False	NA	3	True	AATAAA	-18	NA	66638717	66649930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66649735
transcript_17440.known	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	257.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	0	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699_66640124_66665855
transcript_17442.known	chr11	+	1011	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	58.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	24	False	NA	-13	True	NA	NA	NA	66638719	66646439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638894_66639699_66640124_66646026
transcript_17448.known	chr11	+	1548	2	FSM	ENSG00000173933.21	ENST00000483858.5	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATTTCCGTGACTCC	2	True	NA	17	True	AATAAA	-27	NA	66638697	66641192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638753_66639699
transcript_17449.known	chr11	+	757	2	FSM	ENSG00000173933.21	ENST00000532968.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTTTACCTTAGGCAAA	31	False	NA	NA	False	NA	NA	NA	66638726	66640289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66638894_66639699
transcript_17451.known	chr11	-	1646	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAATAATGGGAGAA	-34	True	NA	34	True	ATTAAA	-15	NA	66677877	66675559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66677092_66677763
transcript_17455.known	chr11	+	1428	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_2	108.365029376809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	13	True	NA	33	True	ATTAAA	-25	NA	66843450	66846532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_17456.known	chr11	+	1379	7	FSM	ENSG00000173653.8	ENST00000524506.5	1379	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	136.024099172005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	-1	True	NA	29	True	ATTAAA	-21	NA	66843436	66846528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
transcript_17457.known	chr11	+	1270	7	FSM	ENSG00000173653.8	ENST00000525356.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	108.627293480455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	285	False	NA	29	True	ATTAAA	-21	NA	66843722	66846528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_1746.known	chr1	+	3034	9	FSM	ENSG00000117758.14	ENST00000373943.9	3034	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	7.59831395771457	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTATCTGTGCCTTG	-10	True	NA	14	True	AATAAA	-14	NA	27773218	27824443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850_27817924_27819649_27819733_27822230
transcript_17462.known	chr11	-	1702	12	FSM	ENSG00000173599.15	ENST00000524491.6	1702	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.2691095338704	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGCTGCAGCCCCTG	6	True	NA	-12	True	AATAAA	-14	NA	66958376	66860429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_66860670_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_17463.known	chr11	+	1187	2	FSM	ENSG00000173237.5	ENST00000308963.4	1187	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACGATTTGCCTGGTGA	0	True	NA	NA	False	AATAAA	-15	NA	66975276	66977004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66975639_66976179
transcript_17464.known	chr11	+	1168	2	FSM	ENSG00000173237.5	ENST00000683896.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTGCCTGGTGACTAAC	-2	True	NA	NA	False	AATAAA	-20	NA	66975303	66977009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_66975639_66976176
transcript_17465.known	chr11	+	4534	11	FSM	ENSG00000173227.14	ENST00000393946.6	4534	11	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	5.07937003968012	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGACTCAGGCCTCCTA	NA	False	NA	29	True	NA	NA	NA	67006777	67050863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67007456_67009878_67010123_67010822_67010995_67021868_67021914_67030121_67030179_67034644_67034839_67039810_67040204_67043637_67043854_67044592_67044714_67045743_67045878_67048583
transcript_17468.known	chr11	+	1104	5	FSM	ENSG00000173156.7	ENST00000308831.7	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	6.59545297913646	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTCGTGCCTCTTT	-6	True	NA	13	True	AAGAAA	-15	NA	67056846	67072017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67057035_67065895_67065984_67066737_67066848_67070424_67070560_67071434
transcript_17469.known	chr11	+	463	3	FSM	ENSG00000173120.15	ENST00000517637.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAGAAGAAG	5	True	NA	NA	False	NA	NA	NA	67240300	67243816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67240370_67243008_67243093_67243506
transcript_17470.nic	chr11	+	1208	2	ISM	ENSG00000173120.15	ENST00000517637.2	463	3	-321	-10	-67	10	intron_retention	FALSE	canonical	3	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAGGAATTA	-2	True	NA	NA	False	AAGAAA	-7	NA	67239979	67243826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_67240370_67243008
transcript_17471.known	chr11	+	2128	15	FSM	ENSG00000172932.16	ENST00000511455.7	2128	15	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_7	29.3858913808123	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	-17	True	NA	6	True	AATAAA	-16	NA	67289302	67302484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_17475.known	chr11	+	2781	14	FSM	ENSG00000172830.13	ENST00000308127.9	2781	14	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_6	10.7604359692589	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	-7	True	NA	11	True	AATAAA	-14	NA	67303529	67312592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_17476.known	chr11	+	2086	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.3838604643302	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	2	True	NA	NA	False	ATTAAA	-18	NA	67391985	67398410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
transcript_17480.known	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	284.595277933809	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-19	True	NA	-8	True	AATAAA	-19	NA	67401858	67398182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_17481.known	chr11	-	1389	7	FSM	ENSG00000172531.16	ENST00000312989.11	1389	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	1071.50574219439	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	5558	False	NA	-8	True	AATAAA	-19	NA	67401793	67398182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401233_67401727
transcript_17482.known	chr11	-	1054	6	FSM	ENSG00000172531.16	ENST00000358239.8	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	1115.11889949009	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACATGGAGCCTTGGTG	-32	True	NA	-32	True	NA	NA	NA	67401871	67398430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401727
transcript_17484.known	chr11	-	1483	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	2805	junction_1	129.544741305852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGTCAAAGCTGG	-24	True	NA	-34	True	NA	NA	NA	67401863	67398208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_17485.known	chr11	-	899	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	97.8241051865825	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	18	True	NA	-11	True	AATAAA	-18	NA	67353518	67351547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
transcript_17486.known	chr11	-	584	4	FSM	ENSG00000175482.9	ENST00000531239.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	91.2249965744039	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCGCAGCTGAAGC	2	True	NA	NA	False	NA	NA	NA	67353534	67351808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353363
transcript_17487.known	chr11	-	1486	4	FSM	ENSG00000175482.9	ENST00000529704.5	1486	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	82.7405583737504	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGCTGGGCGCAGTGG	3396	False	NA	NA	False	AATAAA	-11	NA	67353579	67350776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353538
transcript_17490.known	chr11	-	1705	3	FSM	ENSG00000175505.11	ENST00000312438.8	1705	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTCTCTTTGCCCAGCC	-2	True	NA	-3	True	AATAAA	-16	NA	67373598	67364167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67365631_67367459_67367627_67373523
transcript_17492.known	chr11	+	517	1	FSM	ENSG00000275484.1	ENST00000616071.1	517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGTTGTTTATTTA	1667	False	NA	NA	False	ATTAAA	-19	NA	67374415	67374932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67374400_67374900
transcript_17493.known	chr11	-	1677	6	FSM	ENSG00000172531.16	ENST00000679175.1	1677	6	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	288.100954528096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAAGCTGGATTCTCGC	-14	True	NA	-26	True	AATAAA	-1	NA	67401604	67398200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067
transcript_17495.known	chr11	+	1806	16	FSM	ENSG00000175634.15	ENST00000528964.5	1806	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	159.902831605809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCACGCCCCGCGCT	18	True	NA	-30	True	NA	NA	NA	67428503	67435344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432352_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_1750.nic	chr1	+	1245	7	ISM	ENSG00000117758.14	ENST00000373943.9	3034	9	-30	6043	-30	326	5prime_fragment	FALSE	canonical	3	89	junction_3	7.24952105697718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTAGTCATATCAGCT	11	False	NA	NA	False	ATTAAA	-14	NA	27773188	27818400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850
transcript_17503.nic	chr11	+	1742	15	NIC	ENSG00000175634.15	novel	1733	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	106.49930535368	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	-23	True	NA	27	True	ATTAAA	-14	NA	67428462	67435401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433195_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_17505.known	chr11	+	1733	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.230671867716	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	8	True	NA	27	True	ATTAAA	-14	NA	67428493	67435401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_1751.known	chr1	+	703	4	FSM	ENSG00000117758.14	ENST00000468761.1	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCATTTTGATATAT	26	True	NA	NA	False	AATGAA	-38	NA	27773254	27802039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677
transcript_17520.known	chr11	-	1931	12	FSM	ENSG00000172725.14	ENST00000393893.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	155.638540766421	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCTGCTGCTGCAA	-7	True	NA	-2	True	AATAAA	-19	NA	67443821	67438047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
transcript_17524.known	chr11	-	4411	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_6	48.3455271974564	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	5	True	NA	-2	True	AATAAA	-17	NA	67443476	67435509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_17527.nnic	chr11	-	1639	10	NIC	ENSG00000172725.14	novel	4411	11	NA	NA	-12	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	171.267244783708	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTGACCTGCTGCTG	9150	False	NA	-5	True	AATAAA	-16	NA	67443524	67438050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_67438502_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_17529.nic	chr11	-	881	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_5	236.772042268508	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-3	True	NA	-9	True	AATAAA	-22	NA	67469251	67464352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467564_67468027_67468093_67469018
transcript_17531.known	chr11	-	3551	7	FSM	ENSG00000172663.9	ENST00000308022.7	3551	7	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_5	94.9789450352024	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTGACTTGACTT	-3	True	NA	NA	False	AATAAA	-44	NA	67469251	67461709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_17533.known	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	275.169442747959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	9	True	NA	-9	True	AATAAA	-22	NA	67469239	67464352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_17536.known	chr11	+	1186	6	FSM	ENSG00000110711.11	ENST00000683237.1	1186	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	89.0190990742998	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTCTGCTGAGCTGCT	30	False	NA	26	True	TATAAA	-19	NA	67483067	67491103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490450_67490787
transcript_17537.known	chr11	+	1225	6	FSM	ENSG00000110711.11	ENST00000683856.1	1225	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	87.6607095567906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	354	False	NA	24	True	TATAAA	-17	NA	67483487	67491101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67483711_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490458_67490787
transcript_17538.known	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	289.697083174822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-2	True	NA	-48	True	NA	NA	NA	67469250	67464391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_17540.known	chr11	+	1030	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	95.2716510825754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	3	True	NA	24	True	TATAAA	-17	NA	67483040	67491101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
transcript_17543.known	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	304.933872612845	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	3	True	NA	-57	True	NA	NA	NA	67508158	67506619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
transcript_17544.known	chr11	-	909	4	FSM	ENSG00000167797.8	ENST00000301488.8	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	49.3851079667635	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGCCTTTCTGGGTC	-1	True	NA	-12	True	AATAAA	-25	NA	67508162	67506496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67508000
transcript_17545.known	chr11	-	1692	3	FSM	ENSG00000167797.8	ENST00000525402.5	1692	3	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	12.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGTGCTCTCAGCTCT	15	True	NA	-27	True	AATAAA	-10	NA	67508649	67506511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507013_67507364_67507498_67507591
transcript_17546.known	chr11	-	634	3	FSM	ENSG00000167797.8	ENST00000531506.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	45	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTGGAGGGTTGCTG	573	False	NA	NA	False	NA	NA	NA	67508091	67507052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507498_67507591_67507690_67508000
transcript_17547.known	chr11	-	772	2	FSM	ENSG00000167797.8	ENST00000526447.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGGGAAGAGCATGGG	2	True	NA	NA	False	NA	NA	NA	67508076	67507210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67507498_67507591
transcript_17549.known	chr11	+	741	7	FSM	ENSG00000084207.18	ENST00000398606.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	7876	junction_1	2457.73450333613	6044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCACTGTGTTTCCT	-1	True	NA	47	True	AATAAA	-17	NA	67583811	67586653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_17555.known	chr11	+	706	6	FSM	ENSG00000084207.18	ENST00000398603.6	706	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	5822.21223934683	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	65	False	NA	50	True	AATAAA	-20	NA	67583741	67586656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586388
transcript_17558.known	chr11	+	471	6	FSM	ENSG00000084207.18	ENST00000646888.1	471	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5597.50376507243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTCAAGGCCTTCCT	14	False	NA	NA	False	NA	NA	NA	67583826	67586505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67583845_67584133_67584170_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_1756.known	chr1	+	2340	7	FSM	ENSG00000117751.18	ENST00000311772.10	2340	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	3.24893144826965	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGAGAGAATGTAGT	-18	True	NA	17	True	AATAAA	-24	NA	27830781	27851676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27830892_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_17572.known	chr11	+	723	5	FSM	ENSG00000084207.18	ENST00000498765.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6140.44519456855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGCCTTCCTTTCTC	333	False	NA	-2	True	NA	NA	NA	67584463	67586604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67584571_67584684_67584773_67585037_67585242_67586103_67586212_67586388
transcript_17577.known	chr11	+	1560	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	0	0	0	0	multi-exon	TRUE	canonical	3	688	junction_1	43.305119019965	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTACCCTTTACCCA	5	True	NA	36	True	AATAAA	-41	NA	67606935	67612554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_17582.known	chr11	+	1503	10	FSM	ENSG00000167792.13	ENST00000529927.5	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	244.484693656063	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	9	True	NA	10	True	AATAAA	-15	NA	67606939	67612528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67607050_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_17583.known	chr11	+	1512	10	FSM	ENSG00000167792.13	ENST00000415352.6	1512	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	247.291301210376	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCTGCTGTGACTGT	13	True	NA	17	True	AATAAA	-22	NA	67606943	67612535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67607056_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_17588.known	chr11	-	287	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGAATGTCAACAAT	23	False	NA	NA	False	NA	NA	NA	67683058	67682771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67682800_67683100
transcript_1759.known	chr1	+	2337	7	FSM	ENSG00000130775.16	ENST00000328928.11	2337	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.8507929270724	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTATCATTTATTAAATTC	-6	True	NA	29	True	AATAAA	-32	NA	27872542	27886685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27882126_27882512_27883044_27885294_27885452_27885866
transcript_17597.known	chr11	-	1857	4	FSM	ENSG00000160172.10	ENST00000529253.5	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	32.4995726467629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGATGATCTGTGGCTA	NA	False	NA	NA	False	AATAAA	-31	NA	67805334	67791766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67793294_67796683_67796834_67803001_67803065_67805217
transcript_1760.known	chr1	+	2713	6	FSM	ENSG00000130775.16	ENST00000373921.8	2713	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	20.0159936051149	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	-5	True	NA	19	True	AATAAA	-22	NA	27872543	27886675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27883044_27885294_27885452_27885866
transcript_17602.known	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	22.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	NA	False	NA	NA	False	NA	NA	NA	67805322	67791647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67793294_67803001_67803065_67805217
transcript_17606.known	chr11	+	600	3	FSM	ENSG00000251637.6	ENST00000529069.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTGTGTTGCCTGAT	NA	False	NA	7	True	GATAAA	-14	NA	67886476	67894093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_67886690_67888152_67888325_67893878
transcript_17607.known	chr11	-	776	4	FSM	ENSG00000254610.3	ENST00000527543.2	776	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	67955802	67934562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_67934709_67936774_67936992_67939682_67939775_67955481
transcript_1761.known	chr1	+	1650	5	FSM	ENSG00000130775.16	ENST00000373925.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	32.9431328200583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTATCATTTATTAAATTC	-5	True	NA	29	True	AATAAA	-32	NA	27872543	27886685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27885294_27885452_27885866
transcript_17618.known	chr11	+	689	7	FSM	ENSG00000110717.13	ENST00000526339.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	862.505780979016	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGTTGCTCAACAACG	60	False	NA	NA	False	NA	NA	NA	68030742	68036514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68030878_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_17626.known	chr11	+	353	3	FSM	ENSG00000110717.13	ENST00000528492.1	353	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACGGCCTCTTGTCTTG	5	True	NA	20	True	AATAAA	-11	NA	68030687	68036639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68030734_68036252_68036382_68036461
transcript_17627.known	chr11	+	737	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	376.226623489383	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	-2	True	NA	25	True	AATAAA	-16	NA	68030680	68036644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_17629.known	chr11	+	664	2	FSM	ENSG00000255031.5	ENST00000534517.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTCCCGATCTCGT	9049	False	NA	22	True	ATTAAA	-33	NA	68052822	68053762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68053086_68053361
transcript_17630.known	chr11	-	1599	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	108.976190060031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	40	True	NA	-4	True	AATAAA	-15	NA	68213595	68165718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_17631.known	chr11	-	2869	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_9	55.8412653293265	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	27	False	NA	0	True	AATAAA	-19	NA	68213828	68165714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_17632.known	chr11	-	980	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	110.209743217195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-5	True	NA	NA	False	NA	NA	NA	68271947	68261608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
transcript_17635.nic	chr11	-	945	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	91.9575309585898	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTGTAAATGATTC	22	False	68271999	-5	True	ACTAAA	-21	NA	68271977	68261462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_17636.known	chr11	-	2071	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	14.6590889515307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	26	False	68271999	-24	True	ATTAAA	-18	NA	68271973	68261337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
transcript_17637.nic	chr11	-	2133	4	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	43	junction_3	109.307923876644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTGTAAATGATTC	-7	True	NA	-5	True	ACTAAA	-21	NA	68271949	68261462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_68262919_68263691_68263867_68268053_68268252_68271645
transcript_17640.known	chr11	+	5072	24	FSM	ENSG00000110075.15	ENST00000393800.7	5072	24	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_15	105.915452960384	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTACCTTGCTTGGA	6	True	NA	18	True	AATAAA	-24	NA	68460751	68615334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_17641.known	chr11	+	4292	24	FSM	ENSG00000110075.15	ENST00000524904.5	4292	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	150.083870692243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAATCAAACGTCTAA	9	True	NA	-4	True	NA	NA	NA	68460754	68614575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_17643.known	chr11	+	2771	23	FSM	ENSG00000110075.15	ENST00000524845.5	2771	23	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	112.209082070809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGACGTCTGCTGCTGC	3	True	NA	NA	False	NA	NA	NA	68460748	68613117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_17646.nic	chr11	+	3292	7	ISM	ENSG00000110075.15	ENST00000524845.5	2771	23	-33	56568	-15	2329	5prime_fragment	FALSE	canonical	3	613	junction_1	38.6152675620523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGAAAAAAAAAAACAATGAG	NA	False	NA	NA	False	ATTAAA	-12	NA	68460715	68556549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144
transcript_1765.known	chr1	+	1082	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	34.2960963117119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAGACCCTTATGGAG	0	True	NA	NA	False	NA	NA	NA	27872548	27886533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
transcript_17655.nnic	chr11	-	1668	6	NNC	ENSG00000260808.1	novel	503	3	NA	NA	-19945	0	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_5	12.416118556135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68636656	68612898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_68613222_68615881_68616020_68616188_68616287_68616474_68616905_68617558_68617678_68636096
transcript_17658.nnic	chr11	-	1515	5	NNC	ENSG00000260808.1	novel	503	3	NA	NA	-19911	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	12.3970762682174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68636622	68612898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_68613222_68615881_68616020_68616188_68616287_68616474_68616905_68636096
transcript_17661.nnic	chr11	-	3414	3	NNC	ENSG00000260808.1	novel	563	3	NA	NA	-19965	-1003	intron_retention	FALSE	canonical	3	19	junction_2	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCCCAAAACACAAGCCA	NA	False	NA	NA	False	AATGAA	-43	NA	68636676	68613901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_68616020_68616188_68616905_68636096
transcript_17662.known	chr11	-	503	3	FSM	ENSG00000260808.1	ENST00000565199.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68616230	68612898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68613222_68615881_68616020_68616188
transcript_17663.nic	chr11	+	650	5	ISM	ENSG00000069482.7	ENST00000265643.4	749	6	290	0	290	0	3prime_fragment	FALSE	canonical	3	4321	junction_2	237.037444299419	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	291	False	NA	17	True	AATAAA	-13	NA	68684833	68691175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_17665.known	chr11	-	398	2	FSM	ENSG00000132749.11	ENST00000538944.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTAGTCCATATTAGTA	4197	False	NA	-1	True	ATTAAA	-17	NA	68747366	68744872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68745112_68747207
transcript_17666.nic	chr11	-	1368	8	ISM	ENSG00000110090.13	ENST00000539743.5	2382	18	34485	-94	-7131	94	3prime_fragment	FALSE	canonical	2	3	junction_2	2.1946130708196	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGTGGGTGTTTTTTT	NA	False	NA	-1	True	NA	NA	NA	68781018	68757518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_68757731_68759568_68759662_68760224_68760339_68761534_68761688_68762626_68762762_68773264_68773430_68775315_68775433_68780639
transcript_17670.known	chr11	-	764	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	513.307061016005	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACCAGGTTTCTGTG	-8	True	NA	-14	True	AATAAA	-13	NA	68903827	68891282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_17672.known	chr11	-	662	7	FSM	ENSG00000197345.13	ENST00000450904.6	662	7	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_5	442.369252497905	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTCTGTGTTCTGGT	33	False	NA	-7	True	AATAAA	-20	NA	68903786	68891275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_17673.known	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_2	67.6816485877491	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-13	True	NA	-9	True	AATAAA	-18	NA	68903832	68891277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_17680.known	chr11	-	932	6	FSM	ENSG00000197345.13	ENST00000567045.5	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	476.470187944639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCGCGTGACCCCACCT	2	True	NA	NA	False	NA	NA	NA	68903778	68892491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_17685.known	chr11	-	2132	3	FSM	ENSG00000172935.9	ENST00000309099.7	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGGCTTCATGCCC	4	True	NA	-22	True	AATAAA	-17	NA	69013246	69004397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69006262_69009853_69009958_69013082
transcript_17686.known	chr11	+	4969	25	FSM	ENSG00000162341.18	ENST00000294309.8	4969	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	13.2074789418723	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAGAAGAAACGTAATG	-11	True	NA	NA	False	AATAAA	-21	NA	69048931	69090597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_69049107_69054032_69054098_69054720_69054798_69055174_69055353_69057577_69057695_69062883_69062991_69063894_69063968_69067502_69067606_69070429_69070496_69071355_69071421_69071922_69072024_69072626_69072709_69072914_69073002_69078481_69078602_69078733_69078794_69078891_69079021_69079833_69079884_69081399_69081500_69083944_69084017_69085209_69085287_69085670_69085753_69085847_69085931_69086522_69086605_69087111_69087207_69087874
transcript_17687.nnic	chr11	-	961	6	NIC	ENSG00000149716.13	novel	1000	7	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	29.4482597108895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGATGTGCAAATTGT	-8	True	NA	-13	True	AATAAA	-18	NA	69675384	69653075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_69653320_69654157_69654385_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_17688.nic	chr11	-	1446	6	NIC	ENSG00000149716.13	novel	2484	5	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	21.811923344813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-8	True	NA	2	True	AGTAAA	-21	NA	69675384	69665562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_69666410_69667478_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_17689.known	chr11	+	4238	5	FSM	ENSG00000110092.4	ENST00000227507.3	4238	5	0	0	0	0	multi-exon	TRUE	canonical	3	441	junction_1	8.24621125123532	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTGCCTGCCTCTTTG	0	True	NA	27	True	AATAAA	-16	NA	69641155	69654474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_69641512_69643030_69643247_69643831_69643992_69647993_69648143_69651117
transcript_17691.known	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.7169905660283	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-19	True	NA	2	True	AGTAAA	-21	NA	69675353	69665562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_17692.known	chr11	-	817	4	FSM	ENSG00000149716.13	ENST00000539414.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCGAACGTCGAGG	12	True	NA	84	True	NA	NA	NA	69675322	69667505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69668013_69671748_69671820_69673215_69673322_69675189
transcript_17695.known	chr11	-	775	3	FSM	ENSG00000149716.13	ENST00000542341.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATCACTTGGGCTCAG	NA	False	NA	56	True	AATAAA	-15	NA	69675416	69671377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_69671820_69673215_69673322_69675189
transcript_17697.nic	chr11	-	1654	2	ISM	ENSG00000162344.4	ENST00000294312.4	1821	3	447	0	447	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	811	False	NA	-6	True	ATTAAA	-17	NA	69703575	69698237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_69699577_69703260
transcript_17699.known	chr11	+	1708	2	FSM	ENSG00000168040.5	ENST00000301838.5	1708	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTATTCCTGTTGGTGG	-18	True	NA	26	True	ATTAAA	-33	NA	70203295	70207390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70203746_70206132
transcript_1770.known	chr1	-	1584	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_4	53.4297143451095	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	-8	True	NA	0	True	AATAAA	-29	NA	27914575	27891523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_17702.known	chr11	+	3249	18	FSM	ENSG00000085733.16	ENST00000301843.13	3249	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	204.508153321785	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGATTTGCTTTGGT	-26	True	NA	24	True	AATAAA	-15	NA	70398528	70436575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70421469_70421581_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_17704.known	chr11	+	3272	17	FSM	ENSG00000085733.16	ENST00000346329.7	3272	17	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_10	137.640936293495	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGGTCTGTGGTCA	614	False	NA	33	True	AATAAA	-24	NA	70398403	70436584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_17707.nnic	chr11	+	564	5	NNC	ENSG00000085733.16	novel	597	6	NA	NA	-20	1006	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	365.477769501785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTTCCTCTCATCTTTGA	719	False	NA	30	True	ATTAAA	-36	NA	70398508	70409348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409148
transcript_17709.known	chr11	+	1087	4	FSM	ENSG00000085733.16	ENST00000482755.6	1087	4	0	0	0	0	multi-exon	FALSE	canonical	3	802	junction_2	41.2148840428633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCACAGCCTGCACAA	-18	True	NA	NA	False	NA	NA	NA	70398536	70408342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517
transcript_1771.known	chr1	-	1162	9	FSM	ENSG00000117748.10	ENST00000373909.7	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	264.802491255275	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAATAAGCTTGTTAC	-13	True	NA	NA	False	NA	NA	NA	27914746	27891923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914626
transcript_17710.nic	chr11	+	1378	2	ISM	ENSG00000085733.16	ENST00000482755.6	1087	4	-28	1806	-20	-1806	5prime_fragment	FALSE	canonical	3	830	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAATTTTATATTTTA	719	False	NA	NA	False	NA	NA	NA	70398508	70406536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_70398615_70405264
transcript_17711.known	chr11	-	392	2	FSM	ENSG00000246889.3	ENST00000524619.2	513	2	121	0	60	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGCTCGCGTCTGTAAT	9225	False	NA	NA	False	ATTAAA	-32	NA	70398302	70381090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_70381278_70398097
transcript_17712.known	chr11	-	2710	10	FSM	ENSG00000172893.18	ENST00000682708.1	2710	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	418.47946392672	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71440785_71440837_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_17713.known	chr11	-	2695	9	FSM	ENSG00000172893.18	ENST00000683287.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	330.690470833376	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443956_71444216_71444854_71444959_71447609_71447735_71448289
transcript_17717.known	chr11	-	2627	9	FSM	ENSG00000172893.18	ENST00000355527.8	2627	9	0	0	0	0	multi-exon	TRUE	canonical	3	859	junction_3	56.6700979353309	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGGTTTCTGAC	24	False	71448417	NA	False	ATTAAA	-19	NA	71448393	71434410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_17718.known	chr11	-	2601	9	FSM	ENSG00000172893.18	ENST00000407721.6	2601	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	309.120526655866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	24	False	71448417	NA	False	ATTAAA	-16	NA	71448393	71434413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448312
transcript_17719.nic	chr11	-	2792	9	NIC	ENSG00000172893.18	novel	2627	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	15	junction_1	322.984810014341	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGGTTTCTGAC	NA	False	NA	NA	False	ATTAAA	-19	NA	71448424	71434410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_71435974_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_17725.known	chr11	+	680	2	FSM	ENSG00000254682.2	ENST00000529369.2	792	2	112	0	112	0	multi-exon	FALSE	canonical	3	285	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAATTGTGTGTTTTT	6	True	NA	19	True	AATAAA	-19	NA	71448673	71452157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71448886_71451689
transcript_17728.known	chr11	+	2679	21	FSM	ENSG00000172890.13	ENST00000319023.7	2679	21	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	21.5752172642595	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTCTGGGGACCAGTC	-24	True	NA	NA	False	NA	NA	NA	71453202	71501816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_17733.known	chr11	+	839	5	FSM	ENSG00000172890.13	ENST00000524949.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	27.2614654778499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAATAAAAAGGGTGT	4	True	NA	NA	False	AATGAA	-45	NA	71453230	71464508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052
transcript_17738.known	chr11	+	963	3	FSM	ENSG00000172890.13	ENST00000534634.5	963	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGAGGCCTCTGCACGC	0	True	NA	NA	False	NA	NA	NA	71453108	71459056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71453382_71455109_71455171_71458427
transcript_17739.known	chr11	+	524	2	FSM	ENSG00000172890.13	ENST00000533612.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTGCGTCCCCACA	-18	True	NA	NA	False	NA	NA	NA	71453208	71455460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71453382_71455109
transcript_17742.nnic	chr11	+	2330	4	Fusion	ENSG00000255319.5_ENSG00000284625.1	novel	317	3	NA	NA	-104	4156	multi-exon	FALSE	canonical	1	1	junction_2	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACAAAATTAAGGCTGG	NA	False	NA	NA	False	AAAAAG	-8	NA	71639446	71735675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_+_71639770_71714374_71714559_71731421_71731596_71734026
transcript_17743.nnic	chr11	+	1084	3	Fusion	ENSG00000255319.5_ENSG00000284625.1	novel	317	3	NA	NA	-104	479	multi-exon	FALSE	canonical	1	1	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGTACTTATATTC	NA	False	NA	NA	False	AAAAAG	-9	NA	71639446	71731998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_+_71639770_71714374_71714559_71731421
transcript_17748.known	chr11	+	1580	5	FSM	ENSG00000158483.18	ENST00000691262.1	2322	5	33	709	0	-509	multi-exon	FALSE	canonical	3	41	junction_3	22.5554871372799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGGTTCTTCCAGAACT	-10	True	NA	NA	False	NA	NA	NA	71787513	71800724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71787633_71789782_71789846_71791735_71791820_71796016_71796167_71799560
transcript_17751.known	chr11	+	2010	4	FSM	ENSG00000158483.18	ENST00000346333.11	2044	4	29	5	-1	1	multi-exon	FALSE	canonical	3	48	junction_2	18.8738502225228	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	-14	True	NA	NA	False	AATAAA	-18	NA	71787509	71801234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799560
transcript_17753.nic	chr11	+	1528	3	ISM	ENSG00000158483.18	ENST00000346333.11	2044	4	14	3896	3	403	5prime_fragment	FALSE	canonical	3	48	junction_2	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGAAGTCTT	NA	False	NA	NA	False	AAAAAG	-26	NA	71787494	71797343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_71787633_71789782_71789846_71796016
transcript_17758.nnic	chr11	-	1991	6	NNC	ENSG00000254469.9	novel	4792	6	NA	NA	-1	126	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.0079968025574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAAAAATGAAATCCAA	-2	True	NA	NA	False	TATAAA	-34	NA	71928655	71880577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_71881634_71916073_71916253_71917620_71917777_71918884_71919027_71923308_71923476_71928364
transcript_17766.known	chr11	+	2282	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_6	18.9930085821073	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	1	True	NA	30	True	AATAAA	-29	NA	71929045	71997597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17769.known	chr11	+	2375	9	FSM	ENSG00000137522.18	ENST00000526549.5	2375	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	99.183857053454	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	6	True	NA	28	True	AATAAA	-27	NA	71929050	71997595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71962151_71962290_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17773.known	chr11	+	2202	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	56.4920077424719	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	12	False	NA	24	True	AATAAA	-23	NA	71929081	71997591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17777.known	chr11	+	812	7	FSM	ENSG00000137522.18	ENST00000525243.5	812	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	83.2674739752697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCCACTCAGGACCCC	6	False	NA	NA	False	NA	NA	NA	71929075	71996420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17780.known	chr11	+	2132	7	FSM	ENSG00000137522.18	ENST00000393713.7	2132	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	92.9134902297113	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	-11	True	NA	30	True	AATAAA	-29	NA	71929033	71997597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71995439_71995552_71996194
transcript_17783.known	chr11	+	786	7	FSM	ENSG00000137522.18	ENST00000530655.5	786	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	93.2880842694643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTCCAAGGCATCAACT	-18	True	NA	NA	False	NA	NA	NA	71929026	71996275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_17786.known	chr11	+	721	6	FSM	ENSG00000137522.18	ENST00000528683.5	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_5	11.2605506082074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGCACTAGGGTGAGA	2	True	NA	NA	False	NA	NA	NA	71929046	71990796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596
transcript_17788.known	chr11	+	571	6	FSM	ENSG00000137522.18	ENST00000530058.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	87.9577171145318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACGGGACTTTGCAGA	317	False	NA	NA	False	NA	NA	NA	71929017	71990663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982806_71982916_71987003_71987112_71990596
transcript_1780.nic	chr1	+	1956	9	NIC	ENSG00000130768.15	novel	1866	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	143.763694999816	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	6	True	NA	21	True	AAAACA	-20	NA	27934999	27959152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_27935245_27942274_27942365_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_17801.known	chr11	+	870	5	FSM	ENSG00000137522.18	ENST00000533380.5	870	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	109.736901268443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCCCTGCCTAAGCAG	-13	True	NA	71	True	NA	NA	NA	71929031	71996593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_71929125_71960749_71960892_71994718_71994853_71995449_71995552_71996194
transcript_17808.known	chr11	-	2276	7	FSM	ENSG00000137497.19	ENST00000540626.5	2276	7	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_6	38.8873015549064	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	8240	False	NA	-6	True	AATAAA	-20	NA	72007916	72002863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188
transcript_17809.known	chr11	+	2642	6	FSM	ENSG00000184154.16	ENST00000289488.8	2129	6	-513	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	5.97996655509042	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTTGCTGACTCCAT	9	True	NA	12	True	GATAAA	-21	NA	72080336	72096895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_1781.known	chr1	+	1913	8	FSM	ENSG00000130768.15	ENST00000548116.5	1913	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	119.061123043621	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTCCTTTTCTTTT	-9	True	NA	26	True	AAAACA	-25	NA	27935028	27959157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27935245_27945231_27945446_27948993_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_17815.known	chr11	-	849	6	FSM	ENSG00000110200.9	ENST00000538919.5	849	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	350.673637446558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCAGCTGATGGCCCC	3	True	NA	NA	False	NA	NA	NA	72112232	72109801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72111923
transcript_17818.known	chr11	-	867	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	258.699516814392	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-4	True	NA	-8	True	AATAAA	-18	NA	72112769	72109589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
transcript_17819.known	chr11	-	734	6	FSM	ENSG00000110200.9	ENST00000535503.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	380.1965807316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCTTGATTGCCAGGT	-15	False	NA	-68	True	NA	NA	NA	72112780	72109649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112733
transcript_1782.known	chr1	+	1866	8	FSM	ENSG00000130768.15	ENST00000373894.8	1866	8	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	17.835987468587	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	6	True	NA	21	True	AAAACA	-20	NA	27934999	27959152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_17822.known	chr11	-	848	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	310.824709442477	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-9	True	NA	-7	True	AATAAA	-19	NA	72112774	72109588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
transcript_17825.known	chr11	-	872	6	FSM	ENSG00000110200.9	ENST00000545680.5	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	323.88183030235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	11	True	NA	-5	True	AATAAA	-21	NA	72112754	72109586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
transcript_17831.known	chr11	-	1089	5	FSM	ENSG00000149357.10	ENST00000278671.10	1089	5	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	112.732814654829	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTTCTGGCCCCTC	-31	True	NA	-16	True	GATAAA	-18	NA	72103297	72097291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099257_72103182
transcript_17832.known	chr11	-	704	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	347.917734529299	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	21	True	NA	-8	True	AATAAA	-18	NA	72112686	72109589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
transcript_17839.known	chr11	+	2049	4	FSM	ENSG00000184154.16	ENST00000642510.1	2049	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	16.9705627484771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGATTTCATTTGAT	338	False	NA	-31	True	NA	NA	NA	72080665	72096852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72080886_72093495_72093702_72094947_72095097_72095378
transcript_1784.known	chr1	+	1548	7	FSM	ENSG00000130768.15	ENST00000373888.8	1548	7	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	19.2649653228053	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGCTTCCCACAGTCT	1	True	NA	26	True	GATAAA	-23	NA	27935038	27956480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948
transcript_17842.known	chr11	-	1346	4	FSM	ENSG00000149357.10	ENST00000538404.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_3	44.9468822302751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTTTTTTTGTTTTG	30	True	NA	-15	True	AATGAA	-38	NA	72103236	72097347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72098416_72098780_72098859_72099110_72099257_72103182
transcript_17845.known	chr11	-	812	6	FSM	ENSG00000110200.9	ENST00000542531.5	812	6	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	385.235512381712	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	486	False	NA	-7	True	AATAAA	-19	NA	72112279	72109588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112215
transcript_17846.known	chr11	+	814	6	FSM	ENSG00000184154.16	ENST00000538478.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	13.1909059582729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTAGAGATGTTCTCTA	14	True	NA	26	True	AATAAA	-38	NA	72080844	72095618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72080886_72088339_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_17847.known	chr11	-	500	2	FSM	ENSG00000110200.9	ENST00000543015.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	2520	False	NA	-5	True	AATAAA	-21	NA	72110245	72109586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72109929_72110087
transcript_17848.known	chr11	+	1061	6	FSM	ENSG00000110195.14	ENST00000393681.6	1061	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	10.6131993291373	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTGAGAATTAT	-3	True	NA	12	True	AATAAA	-12	NA	72189667	72196298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72189760_72190575_72190642_72192165_72192342_72195270_72195460_72195611_72195748_72195896
transcript_17849.known	chr11	+	1130	5	FSM	ENSG00000110195.14	ENST00000312293.9	1130	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	12.0830459735946	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGGGAACGTGACTG	15	False	NA	37	True	AATAAA	-37	NA	72189557	72196323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72189760_72192165_72192342_72195270_72195460_72195611_72195748_72195896
transcript_17851.known	chr11	+	930	4	FSM	ENSG00000110195.14	ENST00000393676.5	930	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4.10960933531265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCTTGAGAATTATT	2	True	NA	13	True	AATAAA	-13	NA	72192139	72196299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72192342_72195270_72195460_72195611_72195748_72195896
transcript_17852.known	chr11	-	9963	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	11.9825799485012	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-8	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_17853.known	chr11	-	2071	15	FSM	ENSG00000162129.14	ENST00000340729.9	2071	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.5720802811202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTTACCTTCCCCTC	-11	True	NA	-18	True	AATAAA	-23	NA	72434534	72293302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72430311_72430364_72434071
transcript_17855.known	chr11	-	612	3	FSM	ENSG00000162129.14	ENST00000542555.2	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	41.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTATGTGTGATTCAGA	298	False	NA	2	True	ATTAAA	-38	NA	72434330	72428805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_72429107_72430311_72430364_72434071
transcript_17857.nic	chr11	-	2556	13	ISM	ENSG00000186642.16	ENST00000376450.7	3355	21	58094	-1	136	0	3prime_fragment	FALSE	canonical	3	11	junction_5	3.02305952453618	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCCCCATGGGGCTGT	6097	False	NA	-9	True	AATAAA	-18	NA	72584337	72576140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_72577595_72578232_72578340_72578475_72578515_72578896_72579010_72579283_72579384_72579533_72579609_72580576_72580625_72580885_72580974_72581356_72581480_72581876_72581948_72582443_72582567_72583437_72583516_72584200
transcript_17858.known	chr11	+	664	2	FSM	ENSG00000256633.1	ENST00000545254.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGACTCCAGAGACCAGC	NA	False	NA	NA	False	NA	NA	NA	72584571	72587979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72585057_72587800
transcript_17860.known	chr11	+	1575	13	FSM	ENSG00000168010.11	ENST00000541367.5	1575	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	27.1245839701839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGAAAAAAATGATATCT	7344	False	NA	-10	True	NA	NA	NA	72822340	72829612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_17861.known	chr11	+	1400	12	FSM	ENSG00000168010.11	ENST00000540222.5	1400	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	23.46757918336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCCCAAAGTAGA	7442	False	NA	-24	True	NA	NA	NA	72822438	72829598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_17866.known	chr11	+	2061	8	FSM	ENSG00000021300.14	ENST00000398494.8	2061	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	70.968230891846	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	1008	False	NA	33	True	AATAAA	-24	NA	73647608	73662819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73655802_73655908_73660752_73660853_73661465
transcript_17867.known	chr11	+	2275	7	FSM	ENSG00000021300.14	ENST00000398492.8	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	42.6826142071401	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	NA	False	NA	33	True	AATAAA	-24	NA	73646177	73662819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73646627_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_17868.known	chr11	+	2016	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	15.9478316185409	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	948	False	NA	33	True	AATAAA	-24	NA	73647548	73662819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_17875.known	chr11	-	3326	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	141.451369013942	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	31	True	NA	NA	False	AATAAA	-17	NA	73761074	73675637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
transcript_17876.known	chr11	-	3389	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	91.794357569693	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-32	True	NA	NA	False	AATAAA	-17	NA	73761137	73675637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
transcript_17883.nic	chr11	-	3040	7	NIC	ENSG00000175582.20	novel	3389	8	NA	NA	6	-258	intron_retention	FALSE	canonical	3	7	junction_1	190.26012894631	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGGGTCATATTCTTT	-8	True	NA	-26	True	AATAAA	-16	NA	73761113	73675895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_73677963_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
transcript_17884.known	chr11	-	699	4	FSM	ENSG00000175582.20	ENST00000540771.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	240.146251734692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTCAGGAGCAACCAG	-14	True	NA	NA	False	CATAAA	-7	NA	73761119	73677943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73677963_73679653_73679721_73730764_73730824_73760565
transcript_17885.nic	chr11	-	1889	3	ISM	ENSG00000175582.20	ENST00000400470.3	522	7	-503	15454	6	9846	5prime_fragment	FALSE	canonical	3	486	junction_2	37	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAAGCTTGGAAACGA	-8	True	NA	NA	False	NA	NA	NA	73761113	73719617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_73720900_73730764_73730824_73760565
transcript_17886.nic	chr11	-	1324	3	ISM	ENSG00000175582.20	ENST00000400470.3	522	7	-503	16019	6	9281	5prime_fragment	FALSE	canonical	3	486	junction_2	37	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATGTGTATTTATTTG	-8	True	NA	NA	False	NA	NA	NA	73761113	73720182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_73720900_73730764_73730824_73760565
transcript_17887.known	chr11	-	1812	2	FSM	ENSG00000175582.20	ENST00000541795.1	1812	2	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAAGTTCTGAAATCAG	3011	False	NA	NA	False	GATAAA	-44	NA	73761017	73729463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73730824_73760565
transcript_17891.known	chr11	+	1004	9	FSM	ENSG00000175581.14	ENST00000540162.5	1004	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	228.705289346355	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTGTACTTGCCA	-10	True	NA	-66	True	NA	NA	NA	73787876	73864515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73817822_73817948_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17892.known	chr11	+	1560	9	FSM	ENSG00000175581.14	ENST00000508278.6	1560	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	234.29278558035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	-15	True	NA	NA	False	NA	NA	NA	73787871	73865133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73823012_73823071_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17899.known	chr11	+	1500	8	FSM	ENSG00000175581.14	ENST00000310614.12	1500	8	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_3	41.5790371044185	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	-13	True	NA	NA	False	NA	NA	NA	73787873	73865133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17906.known	chr11	+	742	7	FSM	ENSG00000175581.14	ENST00000544819.5	742	7	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	164.274922005764	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGGGTAGTTAGAGT	-2	True	NA	NA	False	NA	NA	NA	73787884	73864424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_17908.known	chr11	+	531	6	FSM	ENSG00000175581.14	ENST00000497094.6	531	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	246.950683335762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACCTCTGCAACTCTC	4	True	NA	NA	False	NA	NA	NA	73787890	73844934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73843246_73843368_73844806
transcript_17910.known	chr11	+	661	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	198.615205862995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	22	True	NA	21	True	AATAAA	-17	NA	73787908	73864602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
transcript_17913.nic	chr11	+	882	6	NIC	ENSG00000175581.14	novel	1058	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	203.753380340057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTGTGTGTGAGAG	-14	True	NA	24	True	AATAAA	-20	NA	73787872	73864605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_73787993_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_1792.nic	chr1	-	1775	16	ISM	ENSG00000158161.16	ENST00000373871.8	5999	18	-24	18135	3	0	5prime_fragment	FALSE	canonical	3	20	junction_9	20.2532850559003	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTATTATTTTCTA	-24	True	NA	-19	True	AATAAA	-14	NA	28088634	27988478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_17922.known	chr11	+	1612	13	FSM	ENSG00000175575.13	ENST00000544552.5	1612	13	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	331.347207958996	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAAATACTCTTACT	22	False	NA	34	True	AATAAA	-35	NA	73877027	73927745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73877069_73878782_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_1793.nic	chr1	-	1637	15	ISM	ENSG00000158161.16	ENST00000373863.3	1729	17	-70	11206	3	0	5prime_fragment	FALSE	canonical	3	52	junction_6	11.7388679355449	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTATTATTTTCTA	-24	True	NA	-19	True	AATAAA	-14	NA	28088634	27988478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_17935.known	chr11	+	4954	12	FSM	ENSG00000175575.13	ENST00000310571.8	4954	12	0	0	0	0	multi-exon	FALSE	canonical	2	465	junction_8	118.750589385227	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATAAGGAGGGATATGG	-7	True	NA	NA	False	ATTAAA	-18	NA	73876998	73931114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_1794.known	chr1	-	681	1	FSM	ENSG00000228589.3	ENST00000436160.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTCTAAAAGTAGCCCT	15	False	NA	NA	False	AATAAA	-5	NA	28096422	28095741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28095700_28096400
transcript_17944.nnic	chr11	+	1401	11	NIC	ENSG00000175575.13	novel	4954	12	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	44	junction_6	257.732807380046	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGCCTGAATATGAAGAA	262	False	NA	14	True	AATAAA	-15	NA	73876967	73927725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_1795.known	chr1	-	1539	2	FSM	ENSG00000169403.12	ENST00000305392.3	1539	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTTCTCCCCGATGGGG	4	True	NA	NA	False	TTTAAA	-4	NA	28193873	28149672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28151060_28193721
transcript_17951.known	chr11	-	582	3	FSM	ENSG00000181924.7	ENST00000537289.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGAGTTGAGAGCCAT	2	True	NA	NA	False	AAAACA	-16	NA	73876843	73872996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73873395_73876478_73876576_73876756
transcript_17954.known	chr11	+	2020	2	FSM	ENSG00000175575.13	ENST00000381783.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	268	False	NA	NA	False	NA	NA	NA	73876973	73880703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_73877069_73878778
transcript_17955.known	chr11	-	818	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTCTTTTGTTTTT	-1	True	NA	-4	True	AATAAA	-22	NA	73876846	73872666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73873395_73876756
transcript_17956.known	chr11	-	922	2	FSM	ENSG00000181924.7	ENST00000545127.1	922	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTCTTTTGTTT	171	False	NA	-6	True	AATAAA	-20	NA	73876674	73872668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73873395_73876478
transcript_17961.known	chr11	-	1644	8	FSM	ENSG00000175567.11	ENST00000663595.2	1644	8	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_6	24.7204781672266	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTCCTCCCTCTCTTGT	-1	True	NA	-32	True	CATAAA	-16	NA	73982843	73974671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73975122_73975490_73975672_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_17965.known	chr11	-	1413	7	FSM	ENSG00000175567.11	ENST00000536983.5	1413	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.682843357725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCACTTGTCATCCATA	9333	False	NA	-69	True	NA	NA	NA	73982830	73974708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_73975122_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_17966.nnic	chr11	-	2010	8	NNC	ENSG00000168014.18	novel	2401	7	NA	NA	20	-1055	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	23.6202956659509	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGACCCTTATCTCAC	232	False	NA	NA	False	NA	NA	NA	74170978	74130228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_74130836_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_17967.nnic	chr11	-	1833	8	NNC	ENSG00000168014.18	novel	2401	7	NA	NA	-11	-1222	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	23.6202956659509	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTAGCTAGGTATGGTGG	-6	True	NA	NA	False	AATAAA	-9	NA	74170968	74130395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_74130836_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_17968.nnic	chr11	-	1842	7	NNC	ENSG00000168014.18	novel	2401	7	NA	NA	-11	-1055	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	30.0744446702216	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGACCCTTATCTCAC	-6	True	NA	NA	False	NA	NA	NA	74170968	74130228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_74130836_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74168343_74168614_74170737
transcript_1797.known	chr1	-	1600	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_8	1079.58967971318	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	0	True	NA	-25	True	AATAAA	-12	NA	28233025	28200558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
transcript_17972.known	chr11	+	2487	14	FSM	ENSG00000214517.10	ENST00000328257.13	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_9	37.8450593963077	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	-29	True	NA	21	True	AATAAA	-17	NA	74171288	74254703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246075_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_17977.known	chr11	-	8477	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_6	15.2358188987265	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTCTGTGTAATTT	-11	True	NA	-6	True	AATAAA	-17	NA	74398433	74330315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
transcript_17981.known	chr11	-	663	1	FSM	ENSG00000165434.8	ENST00000622957.1	663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATCATTGTAAGTTAT	14	True	NA	NA	False	NA	NA	NA	74398408	74397745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_74397700_74398400
transcript_17983.known	chr11	+	3788	12	FSM	ENSG00000077514.9	ENST00000263681.7	3788	12	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_8	45.8531612508256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGTATGTAGCATGA	-29	True	NA	NA	False	AATAAA	-35	NA	74592581	74643076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_17985.nic	chr11	+	1849	12	NIC	ENSG00000077514.9	novel	3788	12	NA	NA	-9	224	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	106.809477401633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGGGTTACTTTCTGT	-38	True	NA	7	True	AATAAA	-20	NA	74592572	74669341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74668776
transcript_17992.known	chr11	-	399	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	8747	False	NA	NA	False	AAGAAA	-4	NA	74746114	74745715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_74745700_74746100
transcript_17996.nic	chr11	-	212	2	ISM	ENSG00000166435.16	ENST00000524430.1	561	5	24	13289	-3	-11793	5prime_fragment	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAAGGGGCCATTCC	-23	True	NA	NA	False	AAGAAA	-24	NA	74949107	74945053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_74945086_74948927
transcript_17997.known	chr11	+	839	6	FSM	ENSG00000118363.13	ENST00000532972.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1175.00546381708	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGGGGGGTGGGGG	3	True	NA	NA	False	NA	NA	NA	74949264	74977087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74963594_74963688_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_18.known	ERCC-00053	+	1007	1	FSM	ERCC-00053A	DQ516785	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00053_+_0_1000
transcript_18000.known	chr11	+	2691	5	FSM	ENSG00000118363.13	ENST00000263672.11	2691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1183.12686872541	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTTTAAT	4	True	NA	NA	False	ATTAAA	-21	NA	74949265	74979033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_18009.known	chr11	+	612	4	FSM	ENSG00000118363.13	ENST00000530257.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	1221.17648192225	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCCTGAAATTTTA	-1	True	NA	NA	False	GATAAA	-43	NA	74949260	74977156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033_74965118_74969610_74969700_74976856
transcript_18012.known	chr11	+	772	4	FSM	ENSG00000118363.13	ENST00000526361.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	1213.77903901639	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATAGCTTTGGGCCAT	2	True	NA	NA	False	NA	NA	NA	74949263	74977348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033_74965118_74969639_74969700_74976856
transcript_18018.known	chr11	+	265	2	FSM	ENSG00000118363.13	ENST00000527290.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	3067	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGAAATCTTTTCCTT	9	True	NA	NA	False	NA	NA	NA	74949270	74965169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74949400_74965033
transcript_18019.known	chr11	+	746	2	FSM	ENSG00000162139.10	ENST00000534628.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCCAGAGACCTCCACA	18	True	NA	NA	False	AATAAA	-31	NA	74988943	74995043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74989155_74994508
transcript_18021.known	chr11	+	431	2	FSM	ENSG00000162139.10	ENST00000526068.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGAGTGGTTCTTCA	-1	True	NA	NA	False	ATTAAA	-37	NA	74988924	74990163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_74989155_74989962
transcript_18022.known	chr11	-	7352	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.2282530689682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	-1	True	NA	0	True	AATAAA	-35	NA	75351661	75260121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_18024.known	chr11	-	1895	15	FSM	ENSG00000137486.17	ENST00000360025.7	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	7.75024686901083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTGTGTCTGATAGT	3	True	NA	-86	True	NA	NA	NA	75351705	75265598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_18031.known	chr11	+	903	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	7519.55862002551	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	-1	True	NA	NA	False	NA	NA	NA	75399519	75405884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_18035.known	chr11	+	2059	7	FSM	ENSG00000149273.15	ENST00000531188.6	2059	7	0	0	0	0	multi-exon	FALSE	canonical	3	9957	junction_6	3438.83307080889	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGGATGTGCCTAGGT	-3	True	NA	11	True	ATTAAA	-23	NA	75399517	75406907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_18036.known	chr11	+	1306	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	7053.32894021602	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	10	False	NA	NA	False	NA	NA	NA	75399530	75422280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
transcript_18037.known	chr11	+	771	7	FSM	ENSG00000149273.15	ENST00000526248.5	771	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7257.07685450707	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	36	False	NA	68	True	AATAAA	-20	NA	75399556	75405692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404053_75404208_75404671_75404869_75405613
transcript_18038.known	chr11	+	796	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_2	7013.14441285473	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	-2	True	NA	68	True	AATAAA	-20	NA	75399518	75405692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_18039.known	chr11	+	737	6	FSM	ENSG00000149273.15	ENST00000532872.5	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	7187.88793457438	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	9	True	NA	68	True	AATAAA	-20	NA	75399529	75405692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404019_75404208_75404671_75404869_75405613
transcript_18040.known	chr11	+	564	6	FSM	ENSG00000149273.15	ENST00000534440.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7672.74486999275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGACACAAGGTCTGAC	10	False	NA	56	True	AATAAA	-8	NA	75399530	75405680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402380_75404671_75404869_75405613
transcript_18041.known	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	17519	junction_1	1189.08882763232	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	22	False	NA	NA	False	AATAAA	-24	NA	75399542	75404994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
transcript_18042.known	chr11	+	1307	3	FSM	ENSG00000149273.15	ENST00000525933.1	1307	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACCTTTAATAAAATTT	1171	False	NA	33	True	NA	NA	NA	75400691	75405657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75400825_75404019_75404208_75404671
transcript_18044.known	chr11	-	3222	18	FSM	ENSG00000158555.15	ENST00000529721.5	3222	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	6.56086752639938	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	7	True	NA	-4	True	ATTAAA	-14	NA	75490751	75434639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75490603
transcript_18049.known	chr11	+	2058	5	FSM	ENSG00000149257.16	ENST00000358171.8	2058	5	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_4	80.6392429279938	822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	4	True	NA	26	True	AATAAA	-16	NA	75562252	75572783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75562320_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_18050.known	chr11	+	3152	9	FSM	ENSG00000198382.9	ENST00000531818.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	24.6294412238686	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACCTGATTTTTTTTTA	NA	False	NA	4	True	AATAAA	-17	NA	75979525	76142651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_75980039_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_18051.known	chr11	-	683	2	FSM	ENSG00000255507.7	ENST00000531263.2	713	2	30	0	-13	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTGGCATATAGTAGTT	-12	True	NA	NA	False	ATTAAA	-31	NA	75814797	75813513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_75813862_75814462
transcript_18054.nic	chr11	+	536	2	ISM	ENSG00000179240.13	ENST00000531207.5	4228	4	-20	10506	-10	13	5prime_fragment	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTATTTATTTACTT	NA	False	NA	19	True	TATAAA	-20	NA	76381292	76404113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_76381375_76403659
transcript_18055.known	chr11	+	5444	2	FSM	ENSG00000179240.13	ENST00000529331.2	5444	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTTACTGGGAG	-10	True	NA	NA	False	ATTAAA	-21	NA	76381322	76408132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76382294_76403659
transcript_18056.known	chr11	+	5363	2	FSM	ENSG00000179240.13	ENST00000321844.6	5363	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTACTGGGAGAAAA	-8	True	NA	NA	False	ATTAAA	-25	NA	76381324	76408136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76382211_76403659
transcript_18057.known	chr11	+	608	2	FSM	ENSG00000179240.13	ENST00000531785.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGGATTTTATGGTA	410	False	NA	NA	False	AATAAA	-42	NA	76381811	76395099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76382294_76394973
transcript_18058.known	chr11	+	2041	2	FSM	ENSG00000179240.13	ENST00000530460.2	2041	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACATCTCCATTTTGTT	NA	False	NA	6	True	TATAAA	-7	NA	76381304	76404100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76382905_76403659
transcript_1806.known	chr1	-	1763	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	0	0	0	0	multi-exon	FALSE	canonical	3	2334	junction_2	229.588218338834	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCCAGCTCACAGTCTAT	-4	True	NA	-13	True	ATTAAA	-18	NA	28233029	28200277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_18061.known	chr11	-	664	2	FSM	ENSG00000255135.5	ENST00000658868.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCCGTCTCAAAA	1	True	NA	NA	False	NA	NA	NA	76444673	76435558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76435827_76444277
transcript_18063.known	chr11	-	599	2	FSM	ENSG00000255135.5	ENST00000530759.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGTTCCCCTTTGCTG	100	False	NA	NA	False	AATAAA	-21	NA	76444574	76441337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76441640_76444277
transcript_18064.known	chr11	-	738	2	FSM	ENSG00000255135.5	ENST00000572035.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTTTTAAAAAAGAAAT	18	True	NA	NA	False	AATAAA	-5	NA	76444656	76441353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76441640_76444204
transcript_18067.known	chr11	+	934	4	FSM	ENSG00000158636.16	ENST00000533988.5	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTCTGATCATTATAA	-7	True	NA	NA	False	AATAAA	-23	NA	76445021	76453931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313
transcript_18070.known	chr11	+	2585	2	FSM	ENSG00000182704.8	ENST00000333090.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTACTCAGCCAGT	-1	True	NA	29	True	AATAAA	-15	NA	76783355	76798144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76783405_76795608
transcript_18071.known	chr11	-	336	2	FSM	ENSG00000255100.1	ENST00000528075.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGGG	-7	True	NA	NA	False	NA	NA	NA	76783062	76782580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76782857_76783002
transcript_18072.known	chr11	-	296	2	FSM	ENSG00000255100.1	ENST00000526585.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTATTCCCCCTGCTG	-4	True	NA	NA	False	NA	NA	NA	76783059	76782629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_76782857_76782990
transcript_18073.known	chr11	+	7333	11	FSM	ENSG00000078124.13	ENST00000532485.6	7333	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	13.0479883506999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTAGTGTTTCATCC	-2	True	NA	NA	False	ATTAAA	-26	NA	76860917	77026797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_18076.nic	chr11	+	1089	2	ISM	ENSG00000078124.13	ENST00000525194.5	846	11	-7	147644	-1	-111618	5prime_fragment	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGGTTCTGTAAGCTG	-3	True	NA	7	True	AATAAA	-15	NA	76860916	76869045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_76861080_76868119
transcript_18077.known	chr11	+	1695	6	FSM	ENSG00000078124.13	ENST00000530182.6	1695	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	9.56242647030554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTGACAGAATGAAACTC	15	True	NA	NA	False	NA	NA	NA	76860934	76991789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538
transcript_18083.nic	chr11	-	3219	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	218.695485905758	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-1	True	NA	-6	True	AATAAA	-18	NA	77412027	77322016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_18084.known	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	225.910503420172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-2	True	NA	6	True	NA	NA	NA	77474060	77322947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_1809.known	chr1	+	503	3	FSM	ENSG00000130770.18	ENST00000335514.10	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	3693	junction_2	175	2792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGATGCCTTCTTC	-15	True	NA	15	True	AATAAA	-15	NA	28236123	28238100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28236271_28236360_28236453_28237836
transcript_18090.nic	chr11	-	2288	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	218.695485905758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-1	True	NA	6	True	NA	NA	NA	77412027	77322947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_18091.known	chr11	-	3459	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_14	124.555044794153	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-1	True	NA	-6	True	AATAAA	-18	NA	77474094	77322016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_18092.nic	chr11	-	3170	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	322	junction_14	106.156507486035	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-1	True	NA	-6	True	AATAAA	-18	NA	77412027	77322016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_18094.nic	chr11	-	2286	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	37	47	combination_of_known_junctions	FALSE	canonical	3	322	junction_14	106.156507486035	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTGTAATCAATTGAG	-1	True	NA	-20	True	TATAAA	-21	NA	77412027	77322900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_18096.nic	chr11	-	2203	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	37	-36	combination_of_known_junctions	FALSE	canonical	3	322	junction_14	106.156507486035	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTCAAAATCCTCACC	-1	True	NA	-30	True	AATAAA	-15	NA	77412027	77322983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_1810.known	chr1	+	539	3	FSM	ENSG00000130770.18	ENST00000468425.2	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_2	1975.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGATTGATTGATTGA	3	True	NA	NA	False	AATAAA	-34	NA	28236141	28246906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28236271_28236360_28236453_28246588
transcript_18108.nic	chr11	-	1619	6	ISM	ENSG00000149269.10	ENST00000530617.5	3001	15	37	36134	37	690	5prime_fragment	FALSE	canonical	3	322	junction_5	141.716054136432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTACCTCTGGAATACAG	-1	True	NA	NA	False	AAGAAA	-8	NA	77412027	77358150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_18110.nic	chr11	-	2130	2	ISM	ENSG00000149269.10	ENST00000530617.5	3001	15	37	68649	37	1665	5prime_fragment	FALSE	canonical	3	322	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTCGGGCATGGTGGC	-1	True	NA	NA	False	ACTAAA	-14	NA	77412027	77390665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_77392542_77411773
transcript_18111.nic	chr11	-	1941	2	ISM	ENSG00000149269.10	ENST00000278568.8	2543	16	444	67718	119	1665	5prime_fragment	FALSE	canonical	3	240	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTCGGGCATGGTGGC	8	True	NA	NA	False	ACTAAA	-14	NA	77473616	77390665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_77392542_77473551
transcript_18112.known	chr11	-	3001	15	FSM	ENSG00000149269.10	ENST00000530617.5	3001	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	195.950222750367	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	NA	False	NA	-6	True	AATAAA	-18	NA	77412064	77322016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77323155_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_18115.known	chr11	-	953	7	FSM	ENSG00000074201.9	ENST00000528364.1	953	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	360.468984642076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATGATTTATATTTTC	19	True	NA	NA	False	NA	NA	NA	77637776	77618532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77618688_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_1812.known	chr1	+	1855	2	FSM	ENSG00000130770.18	ENST00000465645.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4043	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTTGATGCCTTCT	15	True	NA	13	True	AATAAA	-13	NA	28236153	28238098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28236271_28236360
transcript_18120.known	chr11	-	2982	7	FSM	ENSG00000074201.9	ENST00000525428.6	2982	7	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_4	69.1795168785932	2837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGAAAATACAAAAATTAG	1	True	NA	NA	False	NA	NA	NA	77637794	77614529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_18124.known	chr11	-	1172	6	FSM	ENSG00000074201.9	ENST00000263309.7	1172	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	404.055639732946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	44	False	NA	-1	True	NA	NA	NA	77637751	77616194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77629762_77629900_77637589
transcript_18125.known	chr11	-	1121	6	FSM	ENSG00000074201.9	ENST00000525064.5	1121	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	379.680075853343	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	0	True	NA	-1	True	NA	NA	NA	77637772	77616194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_18126.known	chr11	-	898	5	FSM	ENSG00000074201.9	ENST00000532069.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	437.471356205181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTAGCAGATCTATGT	1	True	NA	NA	False	NA	NA	NA	77637794	77616403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77629762_77629900_77637589
transcript_18129.known	chr11	+	1835	3	FSM	ENSG00000178301.4	ENST00000313578.4	1835	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGAAGGCTTCTTTTA	-3	True	NA	NA	False	TTTAAA	-19	NA	77589952	77610356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77590612_77603555_77603673_77609297
transcript_1813.known	chr1	+	3462	10	FSM	ENSG00000130766.5	ENST00000253063.4	3462	10	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_4	22.7254140654124	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTTTATGGGCTGTT	3	True	NA	25	True	AATAAA	-25	NA	28259517	28282491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28259938_28269182_28269249_28271673_28271872_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_18133.nic	chr11	-	3307	11	ISM	ENSG00000048649.14	ENST00000308488.11	11242	16	-293	23760	-146	0	5prime_fragment	FALSE	canonical	3	94	junction_5	20.794229968912	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGCAAACTTGCTTGA	-3	True	NA	31	True	AAAAAG	-12	NA	77821015	77683768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_18136.known	chr11	-	2107	6	FSM	ENSG00000048649.14	ENST00000528095.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.3775932065525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTCAAATATAAGTTG	17	True	NA	NA	False	NA	NA	NA	77820711	77701118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_18146.nic	chr11	-	1006	5	ISM	ENSG00000048649.14	ENST00000528095.5	2107	6	-304	24454	-146	0	5prime_fragment	FALSE	canonical	3	151	junction_4	5.61248608016091	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	-3	True	NA	-38	True	NA	NA	NA	77821015	77725572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_18147.known	chr11	-	520	2	FSM	ENSG00000048649.14	ENST00000530604.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGAGGTGAAAGTCACC	313	False	NA	NA	False	NA	NA	NA	77820699	77813353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77813702_77820527
transcript_18148.known	chr11	-	11242	16	FSM	ENSG00000048649.14	ENST00000308488.11	11242	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	18.0830184304379	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAGCATGATGTGTTT	6	True	NA	-12	True	AATAAA	-15	NA	77820722	77660008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_1815.nnic	chr1	+	1304	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	-40	True	NA	11	True	AATAAA	-14	NA	28329016	28335965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_28329181_28330596_28330736_28334416_28335161_28335708
transcript_18150.nic	chr11	-	3247	24	NIC	ENSG00000149262.17	novel	3146	23	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_21	41.1777464814796	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	-4	True	NA	-1	True	AATAAA	-17	NA	77994674	77878719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77987603_77987699_77991107_77991300_77994589
transcript_18151.known	chr11	-	3146	23	FSM	ENSG00000149262.17	ENST00000534064.6	3146	23	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_14	17.6581402575518	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	2	True	NA	-1	True	AATAAA	-17	NA	77994668	77878719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_18156.known	chr11	-	1845	12	FSM	ENSG00000149262.17	ENST00000529807.5	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	14.8251517350394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTATATAGTGTTTT	4	True	NA	NA	False	AATAAA	-17	NA	77994666	77924441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_18158.known	chr11	+	579	5	FSM	ENSG00000087884.15	ENST00000526415.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	119.981248534927	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	-16	True	NA	27	True	AATAAA	-15	NA	77821128	77872352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821242_77841018_77841061_77842478_77842629_77869721_77869818_77872174
transcript_1816.nnic	chr1	+	1480	4	NNC	ENSG00000130772.14	novel	1106	4	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCTGTGTAATTCTG	-40	True	NA	9	True	AATAAA	-12	NA	28329016	28335963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_28329181_28330596_28330736_28334416_28335205_28335574
transcript_18163.known	chr11	+	726	5	FSM	ENSG00000087884.15	ENST00000526164.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	138.087834366392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTTATCTGAAAGTC	3	True	NA	NA	False	AATAAA	-34	NA	77821113	77900785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77884779_77884917_77900570
transcript_18164.known	chr11	+	421	4	FSM	ENSG00000087884.15	ENST00000525409.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	51.1881062574327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	42	False	NA	27	True	AATAAA	-15	NA	77821186	77872352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821238_77841018_77841061_77842478_77842629_77872174
transcript_18166.known	chr11	+	531	4	FSM	ENSG00000087884.15	ENST00000393427.7	522	4	0	-9	0	7	multi-exon	FALSE	canonical	3	215	junction_1	70.7876323158847	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACTCACCATTCTCCA	-1	True	NA	36	True	AATAAA	-24	NA	77821143	77872361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77872174
transcript_1817.nnic	chr1	+	1563	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	-40	True	NA	11	True	AATAAA	-14	NA	28329016	28335965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_28329181_28330596_28330736_28334416_28335286_28335574
transcript_18171.nic	chr11	+	459	3	NIC	ENSG00000087884.15	novel	522	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	100	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	0	True	NA	27	True	AATAAA	-15	NA	77821110	77872352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_77821242_77842478_77842629_77872174
transcript_18173.known	chr11	+	606	5	FSM	ENSG00000087884.15	ENST00000533193.5	606	5	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	151.972653790082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACTGTCACTCACCA	NA	False	NA	29	True	AATAAA	-17	NA	77841018	77872354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_77841061_77842478_77842629_77855344_77855483_77869721_77869818_77872174
transcript_18174.known	chr11	-	1673	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCAGTTTTGGTTCTGCT	-27	True	NA	-5	True	AATAAA	-15	NA	78023276	78015714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78017271_78023159
transcript_18175.known	chr11	-	422	2	FSM	ENSG00000151366.13	ENST00000534029.5	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCTGACTCTTTATTG	4816	False	NA	-16	True	ATTAAA	-13	NA	78079819	78069855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78070037_78079578
transcript_18176.known	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3673	junction_1	265	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-6	True	NA	1	True	AATAAA	-19	NA	78079862	78068296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78070037_78072997_78073142_78079578
transcript_18180.known	chr11	-	1667	14	FSM	ENSG00000159063.14	ENST00000532440.6	1667	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	253.697532250163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-15	True	NA	-34	True	AAGAAA	-7	NA	78139626	78100963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78107716_78107765_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18184.known	chr11	-	1727	14	FSM	ENSG00000159063.14	ENST00000679986.1	1727	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	289.077148237518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	9	True	NA	-16	True	AATAAA	-14	NA	78139602	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124024_78124215_78127357_78127437_78135229_78135348_78139493
transcript_18186.known	chr11	-	2026	14	FSM	ENSG00000159063.14	ENST00000679444.1	2026	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	251.260396764489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	0	True	NA	-16	True	AATAAA	-14	NA	78139611	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78137241_78137646_78139493
transcript_18189.known	chr11	-	1677	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	233.976127847195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCCAAGCAATTATT	19	True	NA	-17	True	AATAAA	-13	NA	78139592	78100946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18193.known	chr11	-	1637	13	FSM	ENSG00000159063.14	ENST00000680866.1	1637	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	191.189460280169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139660	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18196.known	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	196.481692672767	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139644	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
transcript_18198.nnic	chr11	-	1692	13	NNC	ENSG00000159063.14	novel	2443	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	196.481692672767	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139660	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139472
transcript_18199.known	chr11	-	1636	13	FSM	ENSG00000159063.14	ENST00000680256.1	1636	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	196.481692672767	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-11	True	NA	-16	True	AATAAA	-14	NA	78139622	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127440_78139493
transcript_1820.nic	chr1	+	3469	15	NIC	ENSG00000204138.13	novel	3078	17	NA	NA	-25	157	combination_of_known_junctions	TRUE	canonical	3	15	junction_3	24.6328136883321	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTAGCCAGATTCAG	-11	True	NA	NA	False	AATAAA	-37	NA	28369684	28497702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28369826_28407409_28407464_28457831_28457860_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_18200.known	chr11	-	1605	13	FSM	ENSG00000159063.14	ENST00000680761.1	1605	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	193.792343043326	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-8	True	NA	-6	True	AATAAA	-24	NA	78139619	78100935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139528
transcript_18204.known	chr11	-	1471	12	FSM	ENSG00000159063.14	ENST00000529139.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	201.55589016326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-13	True	NA	-6	True	AATAAA	-24	NA	78139624	78100935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18205.known	chr11	-	1566	12	FSM	ENSG00000159063.14	ENST00000525783.6	1566	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	200.611091212214	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-13	True	NA	-6	True	AATAAA	-24	NA	78139624	78100935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78139493
transcript_18206.known	chr11	-	1426	12	FSM	ENSG00000159063.14	ENST00000680459.1	1426	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	203.076258932818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	2	True	NA	-16	True	AATAAA	-14	NA	78139609	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78127357_78127437_78139493
transcript_18213.known	chr11	-	1320	11	FSM	ENSG00000159063.14	ENST00000532306.6	1320	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	216.101457653575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	23	True	NA	-34	True	AAGAAA	-7	NA	78139588	78100963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18215.known	chr11	-	1355	11	FSM	ENSG00000159063.14	ENST00000679697.1	1355	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	208.699688547923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-13	True	NA	-16	True	AATAAA	-14	NA	78139624	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_1823.known	chr1	+	6048	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	15.7254551866839	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	44	True	NA	18	True	ATTAAA	-25	NA	28369739	28500364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_18235.known	chr11	-	1398	12	FSM	ENSG00000159063.14	ENST00000530608.6	1398	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	202.852509217579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	23	True	NA	-16	True	AATAAA	-14	NA	78139588	78100945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124093_78139493
transcript_18236.known	chr11	-	1202	8	FSM	ENSG00000159063.14	ENST00000530454.6	1202	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_4	47.1467530857705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTAATTTTTGCCTTA	-15	True	NA	NA	False	AATAAA	-17	NA	78139626	78112383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_18237.known	chr11	-	3389	2	FSM	ENSG00000188997.8	ENST00000340067.4	3389	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTCTTTTGTGTCTG	-5	True	NA	NA	False	TATAAA	-11	NA	78188626	78171248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78174584_78188572
transcript_18238.known	chr11	-	568	2	FSM	ENSG00000033327.13	ENST00000534823.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAATATTAGAGGGACAC	46	True	NA	NA	False	GATAAA	-24	NA	78417771	78280459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78280902_78417645
transcript_18248.known	chr11	-	2512	14	FSM	ENSG00000137513.10	ENST00000281038.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_13	60.159256101406	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-45	True	NA	NA	False	AATAAA	-21	NA	78574864	78435967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
transcript_18249.nic	chr11	-	2050	14	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_13	153.732457988069	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	NA	False	NA	NA	False	AATAAA	-21	NA	78574883	78435967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_18254.nic	chr11	-	1795	14	NIC	ENSG00000137513.10	novel	2137	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_13	153.732457988069	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	NA	False	NA	27	True	GATAAA	-15	NA	78574883	78436222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_18267.nic	chr11	-	1662	13	NIC	ENSG00000137513.10	novel	2137	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_7	216.62658283066	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	NA	False	NA	27	True	GATAAA	-15	NA	78574883	78436222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_18278.known	chr11	-	2120	10	FSM	ENSG00000137509.12	ENST00000393399.6	2120	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	151.996913548911	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGTGTGTTGCTTCTG	-2	True	NA	-9	True	AATAAA	-18	NA	82900430	82824367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82884822_82884886_82900234
transcript_18280.known	chr11	-	3489	9	FSM	ENSG00000137509.12	ENST00000313010.8	3489	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	19.4899814007094	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAGACTTGAGTGCT	-2	True	NA	-7	True	AATAAA	-30	NA	82900430	82822935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_18281.known	chr11	-	3273	9	FSM	ENSG00000137509.12	ENST00000531801.6	3273	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	123.066039182221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	32	False	NA	-115	True	AATATA	-37	NA	82901658	82823043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901570
transcript_18282.known	chr11	-	3333	9	FSM	ENSG00000137509.12	ENST00000680566.1	3333	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	121.433559508894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	NA	False	NA	-115	True	AATATA	-37	NA	82901740	82823043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901592
transcript_18285.known	chr11	-	1420	8	FSM	ENSG00000137509.12	ENST00000531283.2	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	17.2626765016321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTTTTCCTATGCCT	-2	True	NA	NA	False	AATATA	-27	NA	82900430	82838268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_18288.known	chr11	-	814	2	FSM	ENSG00000137509.12	ENST00000680341.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTCAAGAAATATGGGAC	-3	True	NA	NA	False	AGTAAA	-15	NA	82900431	82879220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82879838_82900234
transcript_18291.known	chr11	+	3524	6	FSM	ENSG00000165490.13	ENST00000533655.6	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	14.4692777981487	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTTTTTAATTGTT	-8	True	NA	19	True	AATAAA	-18	NA	82901735	82934659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82930156_82930275_82931731
transcript_18293.known	chr11	+	961	5	FSM	ENSG00000165490.13	ENST00000525388.5	961	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	81.2723046307904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCATGGAGCCTTGTTT	-2	True	NA	NA	False	NA	NA	NA	82901741	82932216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_82901823_82913282_82913387_82914722_82914852_82928776_82928939_82931731
transcript_18294.known	chr11	-	9859	5	FSM	ENSG00000137502.10	ENST00000527633.6	9859	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	4.15331193145904	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAATCATATGCCAT	22	False	83071919	NA	False	AATAAA	-19	NA	83071897	82973132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_82982416_82987586_82987771_82994038_82994123_82997223_82997325_83071690
transcript_183.nnic	chr1	-	2013	10	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4465	345	intron_retention	TRUE	canonical	3	14	junction_4	98.465009138736	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCGGGGTCAGTGACTG	-4	True	NA	NA	False	AATAAA	-27	NA	199876	184871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_188267_188438_188585_188790_188890_195262_195417_199836
transcript_18300.nic	chr11	+	474	3	FSM	ENSG00000246067.9	ENST00000689041.1	463	3	-18	7	-1	0	multi-exon	FALSE	canonical	3	21	junction_2	74.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTTCTGTGTCAT	NA	False	NA	1	True	NA	NA	NA	83072050	83073600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072147_83072622_83072703_83073302
transcript_18301.known	chr11	+	2467	3	FSM	ENSG00000246067.9	ENST00000656330.1	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCCGGGCAATAACAGCA	NA	False	NA	NA	False	NA	NA	NA	83072051	83075492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072147_83072622_83072805_83073302
transcript_18304.known	chr11	+	563	3	FSM	ENSG00000246067.9	ENST00000501011.8	572	3	6	3	0	0	multi-exon	FALSE	canonical	3	38	junction_1	55	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGTGTCATGTTT	18	True	NA	5	True	NA	NA	NA	83072102	83073604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072182_83072622_83072805_83073302
transcript_18307.known	chr11	+	825	2	FSM	ENSG00000246067.9	ENST00000533708.1	825	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTTCCCTTTTGCAT	33	False	NA	18	True	NA	NA	NA	83072117	83073383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072182_83072622
transcript_18310.known	chr11	+	1487	1	FSM	ENSG00000246067.9	ENST00000663168.1	1487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTTCAAAAAATGATC	18	True	NA	-10	True	NA	NA	NA	83072102	83073589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83072100_83073600
transcript_18321.known	chr11	-	1986	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	291.294953612314	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGTTGTGTGGGTTTT	1	True	NA	-27	True	TATAAA	-16	NA	83285998	83261461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
transcript_18322.known	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_8	227.739674573843	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-1	True	NA	-21	True	TATAAA	-22	NA	83286351	83261455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
transcript_18323.known	chr11	-	4014	9	FSM	ENSG00000137500.10	ENST00000529689.6	3990	9	-40	16	-17	-16	multi-exon	FALSE	canonical	3	629	junction_8	147.343932263938	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGTTGACCTTAATCCA	NA	False	NA	NA	False	AATAAA	-14	NA	83286407	83259096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285872
transcript_18324.known	chr11	-	1550	9	FSM	ENSG00000137500.10	ENST00000455220.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	322.40151112394	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGTGGATCACTTGAGG	-5	True	NA	42	True	NA	NA	NA	83286390	83261316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83286099
transcript_18326.known	chr11	-	773	9	FSM	ENSG00000137500.10	ENST00000529312.5	773	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	431.642339645916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGGCTTCTTAGAA	4	True	NA	-154	True	NA	NA	NA	83285979	83261890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285126_83285212_83285872
transcript_18334.nic	chr11	-	1842	8	NIC	ENSG00000137500.10	novel	1919	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_6	329.132626329092	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	7	True	NA	-21	True	TATAAA	-22	NA	83286378	83261455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
transcript_18335.known	chr11	-	1053	8	FSM	ENSG00000137500.10	ENST00000529745.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_6	281.720443282459	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	175	False	NA	-20	True	ACTAAA	-27	NA	83286210	83261756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285872
transcript_18343.nic	chr11	-	1541	8	NIC	ENSG00000137500.10	novel	1053	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_6	329.132626329092	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	7	True	NA	-20	True	ACTAAA	-27	NA	83286378	83261756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
transcript_18346.known	chr11	-	719	8	FSM	ENSG00000137500.10	ENST00000529073.5	719	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	329.065963240298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATTCTGGAAGTAGTA	5	True	NA	NA	False	NA	NA	NA	83285978	83261928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273739_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285872
transcript_18348.known	chr11	-	1039	7	FSM	ENSG00000137500.10	ENST00000529856.5	1039	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	372.831396210137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACGGACTAAAAGAGGAA	-5	True	NA	-59	True	NA	NA	NA	83286355	83261795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83285872
transcript_1835.known	chr1	+	2686	14	FSM	ENSG00000180198.17	ENST00000649185.1	2686	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	240.374215159633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAGTTTTATAAAAT	NA	False	NA	83	True	NA	NA	NA	28505979	28538968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_18356.known	chr11	+	4066	6	FSM	ENSG00000137494.14	ENST00000393389.7	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	15.8113883008419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGATACATTGTTTT	-9	True	NA	6	True	AATAAA	-17	NA	83193738	83215200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83212652
transcript_18357.known	chr11	+	3230	6	FSM	ENSG00000137494.14	ENST00000526731.5	3230	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	18.8827964030755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGATACATTGTTTT	427	False	NA	6	True	AATAAA	-17	NA	83194248	83215200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83212978
transcript_18359.nic	chr11	+	1601	5	ISM	ENSG00000165494.12	ENST00000530304.5	2649	8	-18	2504	-2	2398	5prime_fragment	FALSE	canonical	3	53	junction_1	18.1848150939183	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAAGATGAGCACATGA	-2	True	NA	68	True	NA	NA	NA	83157124	83166183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599
transcript_18362.known	chr11	-	435	4	FSM	ENSG00000247137.9	ENST00000529031.5	435	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGGTAAAGGTTTTA	1004	False	NA	-33	True	AATATA	-20	NA	83193600	83191062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83191169_83192427_83192542_83192735_83192817_83193466
transcript_18364.known	chr11	-	549	3	FSM	ENSG00000247137.9	ENST00000528524.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTAGTAGATAAATT	810	False	NA	1	True	NA	NA	NA	83193794	83191028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_83191169_83192735_83192817_83193466
transcript_18366.known	chr11	+	1720	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	1	True	NA	14	True	AATAAA	-15	NA	83157159	83158879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_83157200_83158900
transcript_18369.nic	chr11	-	1945	5	NIC	ENSG00000150672.18	novel	566	5	NA	NA	48	1294	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	6.32455532033676	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATATTCATGTGTCAGT	74	False	NA	NA	False	AATAAA	-19	NA	83725355	83484860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_83486252_83532707_83532784_83541681_83541859_83633210_83633326_83725169
transcript_18371.nnic	chr11	+	2358	3	Antisense	novelGene_ENSG00000150672.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAAATTCTCTGACTT	NA	False	NA	4	True	AATAAA	-14	NA	83434411	83617070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_+_83434933_83565647_83565787_83615372
transcript_1838.known	chr1	+	2844	13	FSM	ENSG00000180198.17	ENST00000373833.10	2844	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	215.266824094089	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTGAGACAGA	10	False	NA	NA	False	AATAGA	-37	NA	28506056	28539300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829_28508902_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_18383.known	chr11	+	675	6	FSM	ENSG00000171204.13	ENST00000530783.5	675	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	320.573610891477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCCTCTAGTCTTTCAG	1	True	NA	NA	False	AATGAA	-9	NA	85628596	85636128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85629131_85629204_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_18385.known	chr11	+	820	6	FSM	ENSG00000171204.13	ENST00000531477.5	820	6	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	314.298329616942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATACATGAAGAGTAAC	-3	True	NA	NA	False	ATTAAA	-43	NA	85628592	85636210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85629131_85629263_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_1839.known	chr1	+	2715	12	FSM	ENSG00000180198.17	ENST00000398958.6	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	175.685152267551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTGGGTATTTCT	NA	False	NA	26	True	NA	NA	NA	28505942	28539196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_18390.known	chr11	+	1149	6	FSM	ENSG00000171204.13	ENST00000529197.1	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	184.574537788938	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	9	True	NA	20	True	AATAAA	-34	NA	85628604	85636510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_18395.known	chr11	+	1015	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	135.511069658534	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	-3	True	NA	46	True	AATAAA	-43	NA	85628592	85636536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_184.nnic	chr1	-	1567	10	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4464	293	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	98.9264597791938	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCAACAGTGTGCTTTT	-3	True	NA	NA	False	AATAAA	-11	NA	199875	184923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188890_199836
transcript_18402.known	chr11	+	1273	4	FSM	ENSG00000171204.13	ENST00000534341.1	1273	4	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	143.810832538984	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	6	True	NA	46	True	AATAAA	-43	NA	85628601	85636536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666
transcript_18404.known	chr11	+	1388	4	FSM	ENSG00000171204.13	ENST00000528361.5	1388	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	156.768052300914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCCAGGTCTGGTTTG	1	True	NA	0	True	AATAAA	-13	NA	85628596	85635087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085
transcript_18406.known	chr11	+	853	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	303.611959945952	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	8	True	NA	17	True	AATAAA	-31	NA	85628603	85636507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
transcript_18410.known	chr11	+	722	5	FSM	ENSG00000171202.7	ENST00000531366.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	111.600571235097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATGTTATGTCTAAT	10	True	NA	22	True	AATAAA	-18	NA	85647986	85656547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85648090_85650248_85650342_85654062_85654235_85655593_85655709_85656308
transcript_18411.known	chr11	+	759	5	FSM	ENSG00000171202.7	ENST00000304511.7	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	19.0180834996589	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	-10	True	NA	17	True	AATAAA	-13	NA	85647966	85656542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85648090_85650248_85650342_85654062_85654257_85655593_85655709_85656308
transcript_18414.known	chr11	+	656	4	FSM	ENSG00000171202.7	ENST00000528105.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	119.978701813651	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	0	True	NA	17	True	AATAAA	-13	NA	85647976	85656542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85648090_85654062_85654257_85655593_85655709_85656308
transcript_18415.known	chr11	+	643	5	FSM	ENSG00000171202.7	ENST00000532180.1	643	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.449356266718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTAATGTTATGTC	-3	True	NA	18	True	AATAAA	-14	NA	85648020	85656543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_85648090_85650311_85650342_85654062_85654257_85655593_85655709_85656308
transcript_18416.known	chr11	-	1431	4	FSM	ENSG00000137504.15	ENST00000260058.9	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	96.2219656142331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTATTTATTTCCTGG	454	False	NA	NA	False	NA	NA	NA	85664653	85660152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85660598_85662388_85662458_85663523_85663602_85663814
transcript_18420.nic	chr11	-	2215	4	ISM	ENSG00000137504.15	ENST00000682836.1	4368	5	-65	4009	0	202	5prime_fragment	FALSE	canonical	3	40	junction_2	130.830679378602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	-22	True	NA	0	True	AATAAA	-22	NA	85665129	85661750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_85662458_85663178_85663294_85663523_85663602_85663814
transcript_18422.nic	chr11	-	2785	3	ISM	ENSG00000137504.15	ENST00000260058.9	1431	4	-476	913	0	-731	5prime_fragment	FALSE	canonical	3	320	junction_2	4	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	-22	True	NA	0	True	ATTAAA	-22	NA	85665129	85661065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_18424.known	chr11	-	745	3	FSM	ENSG00000137504.15	ENST00000528889.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGGAAAGATTATTTG	1248	False	NA	NA	False	TATAAA	-7	NA	85663859	85661952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85662458_85663523_85663602_85663697
transcript_18425.nic	chr11	-	2100	3	ISM	ENSG00000137504.15	ENST00000525639.1	2850	4	-27	1416	0	202	5prime_fragment	FALSE	canonical	3	320	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	-22	True	NA	0	True	AATAAA	-22	NA	85665129	85661750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_18429.nic	chr11	-	3372	21	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	39.238851920004	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	1063	False	86068831	-21	True	AATAAA	-18	NA	86068807	85957683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18430.nic	chr11	-	3230	20	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	27.1939784763826	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	1	True	NA	-21	True	AATAAA	-18	NA	86068830	85957683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18431.known	chr11	-	3474	20	FSM	ENSG00000073921.18	ENST00000532317.5	3474	20	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	25.0165596125376	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	22	True	NA	-21	True	AATAAA	-18	NA	86069059	85957683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18432.nic	chr11	-	3626	20	NIC	ENSG00000073921.18	novel	4134	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	45.7895341802383	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-19	True	NA	-21	True	AATAAA	-18	NA	86069100	85957683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18433.known	chr11	-	4134	20	FSM	ENSG00000073921.18	ENST00000393346.8	4134	20	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_3	44.7789894340732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAGTTGTACTTTTAT	-3	True	NA	27	True	ATTAAA	-16	NA	86069084	85957174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18437.known	chr11	-	3613	20	FSM	ENSG00000073921.18	ENST00000526033.5	3613	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	49.5850929256285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGTTATGGTATT	-16	True	NA	-25	True	AATAAA	-14	NA	86069097	85957687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990379_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_18439.known	chr11	+	1696	13	FSM	ENSG00000074266.22	ENST00000351625.10	1696	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	132.10756875449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTTTTTGTAGTTCT	7	True	NA	89	True	AATAAA	-23	NA	86245222	86278813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86270082_86270158_86276979_86277139_86277917_86277992_86278398
transcript_18443.known	chr11	+	1791	12	FSM	ENSG00000074266.22	ENST00000673233.2	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_2	48.8764676598984	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTGTTTTTTGTAGT	181	False	NA	86	True	AATAAA	-20	NA	86245049	86278810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979_86277139_86277917_86277992_86278398
transcript_18444.known	chr11	+	2033	11	FSM	ENSG00000074266.22	ENST00000327320.8	2033	11	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_2	51.0804267797363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGTGTTTAGTTA	271	False	NA	11	True	AATAAA	-13	NA	86245139	86278735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979_86277139_86277917
transcript_1845.nic	chr1	+	2412	11	NIC	ENSG00000180198.17	novel	1577	11	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_2	151.511187705727	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACTTGTTTTCTACACA	6207	False	NA	-91	True	AATAAA	-20	NA	28518204	28538989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28518309_28529857_28529940_28530522_28530574_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_18450.known	chr11	+	1745	10	FSM	ENSG00000074266.22	ENST00000528180.5	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	117.429674252557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCTTTTAATAAAAATT	-26	True	NA	-17	True	NA	NA	NA	86244752	86278707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86276979_86277139_86277917_86277992_86278398
transcript_1846.known	chr1	+	1577	11	FSM	ENSG00000180198.17	ENST00000373831.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	163.99649386496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTCCTCTTTGGAAT	15	True	NA	22	True	NA	NA	NA	28518256	28538164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28518309_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_18471.known	chr11	+	1108	5	FSM	ENSG00000149196.17	ENST00000278483.8	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_4	153.389007102856	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCATGTGTAATCATT	4	True	NA	29	True	AATAAA	-30	NA	86302239	86345943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602_86344722_86345583
transcript_18477.known	chr11	+	499	5	NNC	ENSG00000149196.17	novel	1108	5	NA	NA	2977	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	412.172521524664	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAATTTGTCATGTT	2979	False	NA	11	True	AATAAA	-15	NA	86306332	86345662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_86306415_86306415_86306483_86337378_86337531_86344602_86344722_86345583
transcript_18479.known	chr11	+	1694	4	FSM	ENSG00000149196.17	ENST00000533986.5	1694	4	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_2	60.4041941148681	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAAATAATTTTTA	NA	False	NA	-13	True	AAAACA	-4	NA	86302210	86345638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602
transcript_18481.known	chr11	+	715	4	FSM	ENSG00000149196.17	ENST00000531485.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	398.420213677302	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATTGAAAAATGAAAA	7	True	NA	NA	False	ATTAAA	-19	NA	86302242	86345791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86302479_86337378_86337531_86344602_86344722_86345583
transcript_18490.nnic	chr11	+	691	3	NNC	ENSG00000149201.10	novel	2510	14	NA	NA	3150	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.5	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGCATGACAATTCA	84	False	NA	16	True	AATAAA	-16	NA	86422225	86423106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_86422301_86422388_86422472_86422573
transcript_18491.known	chr11	+	1226	3	FSM	ENSG00000246523.9	ENST00000499504.8	1226	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	NA	False	NA	NA	False	AATATA	-43	NA	86955615	87000959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86955713_86957981_86958027_86999875
transcript_18492.known	chr11	+	1299	3	FSM	ENSG00000246523.9	ENST00000531827.3	1313	3	14	0	10	0	multi-exon	FALSE	canonical	2	5	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	-1	True	NA	NA	False	AATATA	-43	NA	86956090	87000959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_86956261_86957981_86958027_86999875
transcript_18495.known	chr11	+	8980	15	FSM	ENSG00000166575.17	ENST00000305494.6	8980	15	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	21.2396433345664	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTAGATCTCCTTT	-1	True	NA	11	True	AATAAA	-19	NA	87037933	87328824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_18500.known	chr11	+	3938	14	FSM	ENSG00000166575.17	ENST00000340353.11	3938	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	58.4516185915868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTCTCAAATCTATT	-20	True	NA	46	True	AGTAAA	-20	NA	87037843	87323758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_18509.nnic	chr11	-	1476	3	NNC	ENSG00000285835.1	novel	837	4	NA	NA	-486	-106597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAACACAGATTCCAT	NA	False	NA	NA	False	AGTAAA	-17	NA	88046094	87953855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_87954907_88045576_88045692_88045784
transcript_18510.nic	chr11	-	1598	2	ISM	ENSG00000285835.1	ENST00000649399.1	837	4	-515	106597	-515	-106597	5prime_fragment	FALSE	canonical	1	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAACACAGATTCCAT	NA	False	NA	NA	False	AGTAAA	-17	NA	88046123	87953855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_87954907_88045576
transcript_18511.nnic	chr11	-	2142	8	Fusion	ENSG00000123892.12_ENSG00000109861.17	novel	1524	6	NA	NA	-5	0	multi-exon	FALSE	canonical	0	0	junction_2	696.581331231614	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	14	True	NA	-13	True	AATAAA	-25	NA	88337754	88113250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_-_88114141_88149674_88149956_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18512.nnic	chr11	-	2010	7	Fusion	ENSG00000123892.12_ENSG00000109861.17	novel	1432	3	NA	NA	-5	0	multi-exon	FALSE	canonical	3	20	junction_2	737.312386682575	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	14	True	NA	-13	True	AATAAA	-25	NA	88337754	88113250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_-_88114141_88149674_88149956_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18513.known	chr11	-	1432	3	FSM	ENSG00000123892.12	ENST00000243662.11	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	17	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	29	True	NA	-13	True	AATAAA	-25	NA	88175443	88113250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88114141_88149674_88149956_88175182
transcript_18514.known	chr11	-	1007	3	FSM	ENSG00000123892.12	ENST00000526372.1	1007	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	48.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTTTTCCAGATTT	38	True	NA	NA	False	NA	NA	NA	88175434	88113611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88114141_88149674_88149956_88175237
transcript_18515.known	chr11	-	1957	8	FSM	ENSG00000109861.17	ENST00000677802.1	1957	8	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_5	710.138905641792	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	0	True	NA	-6	True	AATAAA	-19	NA	88337738	88293591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88328111_88328197_88334936_88335083_88337500
transcript_18517.known	chr11	-	1667	7	FSM	ENSG00000109861.17	ENST00000678464.1	1667	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	603.530906876819	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGCTTAATCATTTGT	2	True	NA	39	True	NA	NA	NA	88337736	88293761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294476_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_1852.known	chr1	+	2424	10	FSM	ENSG00000180198.17	ENST00000373832.5	2424	10	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	57.2572708197692	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	6138	False	NA	-97	True	AATAAA	-14	NA	28518135	28538983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28518309_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_18520.known	chr11	-	1870	7	FSM	ENSG00000109861.17	ENST00000227266.10	1870	7	0	0	0	0	multi-exon	FALSE	canonical	3	1401	junction_2	190.859168556877	2648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	2	True	NA	-6	True	AATAAA	-19	NA	88337736	88293591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18521.known	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	565.648718041703	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-2	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
transcript_18522.known	chr11	-	2774	7	FSM	ENSG00000109861.17	ENST00000679224.1	2774	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	564.918504447028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTTTTTTTTCACTA	392	False	NA	NA	False	TATAAA	-18	NA	88337749	88292493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337707
transcript_18524.known	chr11	-	1867	7	FSM	ENSG00000109861.17	ENST00000678506.1	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	625.0039999872	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-4	True	NA	-6	True	AATAAA	-19	NA	88337772	88293591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312426_88312555_88334936_88335083_88337500
transcript_18525.known	chr11	-	1802	7	FSM	ENSG00000109861.17	ENST00000678395.1	1802	7	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_4	614.672654526149	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	8	True	NA	-6	True	AATAAA	-19	NA	88337730	88293591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312449_88312555_88334936_88335083_88337500
transcript_18528.known	chr11	-	1431	6	FSM	ENSG00000109861.17	ENST00000678915.1	1431	6	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_1	641.204366797357	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTAGACTTTCAGCAG	-12	True	NA	-142	True	NA	NA	NA	88337780	88293942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18530.known	chr11	-	1662	6	FSM	ENSG00000109861.17	ENST00000677208.1	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	675.283229467458	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	1	True	NA	-6	True	AATAAA	-19	NA	88337695	88293591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88334936_88335083_88337500
transcript_18532.known	chr11	-	6119	6	FSM	ENSG00000109861.17	ENST00000533897.2	6119	6	0	0	0	0	multi-exon	FALSE	canonical	3	1412	junction_2	190.097238275573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	421	False	NA	-6	True	AATAAA	-19	NA	88337720	88293591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88294509_88296132_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_18534.known	chr11	-	900	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	807.838280536395	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	416	False	NA	-23	True	AATAAA	-16	NA	88337725	88326087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
transcript_18536.known	chr11	-	6144	4	FSM	ENSG00000109861.17	ENST00000524463.6	6144	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	873.209533210036	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTATTGTTTTATT	-12	True	NA	NA	False	AATAAA	-33	NA	88337780	88320810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337500
transcript_18539.known	chr11	-	724	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	903.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	419	False	NA	-23	True	AATAAA	-16	NA	88337722	88326087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326444_88334936_88335083_88337500
transcript_1854.nnic	chr1	+	2303	10	NNC	ENSG00000180198.17	novel	2424	10	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	150.094126845724	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACTTGTTTTCTACACA	25	False	NA	-91	True	AATAAA	-20	NA	28518305	28538989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_28518352_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_18543.known	chr11	-	1604	3	FSM	ENSG00000109861.17	ENST00000679199.1	1604	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCAGACTGCTTCCTC	2	True	NA	NA	False	TATAAA	-24	NA	88337736	88315252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88316475_88334936_88335083_88337500
transcript_18544.known	chr11	-	778	4	FSM	ENSG00000109861.17	ENST00000529974.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	880.852238838425	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	5	True	NA	-21	True	AATAAA	-18	NA	88337733	88326085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_88326400_88328111_88328197_88334936_88335083_88337500
transcript_18545.known	chr11	+	3466	19	FSM	ENSG00000077616.11	ENST00000534061.6	3466	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.51539822656808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACGAGTTAAGAATTA	-10	True	NA	NA	False	AATAAA	-22	NA	90134662	90192894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
transcript_18554.known	chr11	+	2922	10	FSM	ENSG00000077616.11	ENST00000524501.1	2922	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGGGGTTTTTTTTCTT	22	True	NA	NA	False	AATAAA	-22	NA	90134694	90164201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_90134837_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90159338_90162948_90163035_90163309_90163430_90163534
transcript_18555.known	chr11	+	1504	7	FSM	ENSG00000077616.11	ENST00000529090.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.8151743807532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATAACTGATATTTCTT	-9	True	NA	NA	False	AGTAAA	-16	NA	90134663	90158757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144
transcript_18557.known	chr11	-	1136	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	182.457467023762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGGAGATGGAAGGAAG	269	False	NA	37	True	AAAAAG	-32	NA	90223030	90202406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_18560.known	chr11	-	3070	11	FSM	ENSG00000110172.12	ENST00000320585.11	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_10	65.7096644337802	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTCTTTTTTAGC	-3	True	NA	0	True	AATAAA	-30	NA	90223049	90200428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_18568.known	chr11	-	5361	9	FSM	ENSG00000110172.12	ENST00000533724.5	5361	9	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_8	64.1789490409433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTTTTTTTTAAAGT	5	True	NA	-21	True	AATAAA	-16	NA	90223041	90201448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90214176_90215173_90215231_90218134_90218185_90222890
transcript_18569.known	chr11	-	6037	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	29.6359578890239	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTTTAGATAACATT	-22	True	NA	-5	True	AATAAA	-15	NA	93197991	93144173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
transcript_18575.known	chr11	-	374	3	FSM	ENSG00000166002.7	ENST00000526869.1	374	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	6	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACGTGGCCACGCG	7	True	NA	NA	False	NA	NA	NA	93543355	93479048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93479270_93499275_93499349_93543275
transcript_18581.nic	chr11	-	1654	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	117.151194474764	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACTTCATGCTTGAAA	NA	False	NA	-10	True	AATAAA	-16	NA	93741526	93730199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18584.nic	chr11	-	1676	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	128.910821888622	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACTTCATGCTTGAAA	NA	False	NA	-10	True	AATAAA	-16	NA	93741526	93730199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18589.nic	chr11	-	1671	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-129	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	117.151194474764	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGAAAGTCAGCATGT	NA	False	NA	-36	True	ATTAAA	-15	NA	93741624	93730280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_1859.nnic	chr1	+	1052	4	NNC	ENSG00000242125.3	novel	2201	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	396.081641415841	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTGGTTCATTTTTG	NA	False	NA	13	True	AATAAA	-10	NA	28505977	28509633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_28506085_28506219_28506328_28508127_28508161_28508829
transcript_18593.nic	chr11	-	1565	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	128.910821888622	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGAAAGTCAGCATGT	-6	True	NA	-36	True	ATTAAA	-15	NA	93741496	93730280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18598.nic	chr11	+	1811	13	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-57	34760	-57	-22	5prime_fragment	TRUE	canonical	2	13	junction_3	5.55465270441516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93661624	93695598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807_93668933_93669676_93669771_93675570_93675667_93679411_93679553_93683558_93683743_93683963_93684129_93687643_93687866_93691682_93691776_93691926_93692031_93695496
transcript_18599.known	chr11	+	3622	13	FSM	ENSG00000042429.12	ENST00000638487.1	3622	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	59.7401781792529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCCTTTGTATTTC	NA	False	NA	-18	True	TTTAAA	-44	NA	93784241	93813268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794249_93794440_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_18621.known	chr11	+	5087	12	FSM	ENSG00000042429.12	ENST00000251871.9	5087	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	18.4610378190223	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAGTAAGTTCACTTT	-4	True	NA	NA	False	AATAAA	-17	NA	93784281	93814963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_18622.known	chr11	+	2835	12	FSM	ENSG00000042429.12	ENST00000640583.1	2835	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	62.0223899854249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGTATGTGGTTTAA	NA	False	NA	-11	True	TTTAAA	-26	NA	93784226	93812380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93794036_93794249_93794440_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_18635.known	chr11	+	2317	11	FSM	ENSG00000042429.12	ENST00000639724.1	2317	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	47.1772190787037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAGTATGTGGTTT	21	False	NA	-13	True	TTTAAA	-24	NA	93784306	93812378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93811852
transcript_18636.known	chr11	+	3235	11	FSM	ENSG00000042429.12	ENST00000639189.1	3235	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	44.5089878563869	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGGAGCTTGTGGG	7	True	NA	-6	True	AATAAA	-35	NA	93784292	93813307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_18637.known	chr11	+	2627	11	FSM	ENSG00000042429.12	ENST00000640804.1	2627	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_5	19.3517441074442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGATGTTGACATCAA	NA	False	NA	-29	True	TTTAAA	-45	NA	93784226	93812362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_18652.known	chr11	+	1862	10	FSM	ENSG00000182919.15	ENST00000528099.5	1862	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.0570059359336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAAAATCAGTGT	-1	True	NA	NA	False	ATTAAA	-16	NA	93741658	93762303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93741962_93742095_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_18655.known	chr11	+	4163	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	26.6549127741961	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	12	True	NA	NA	False	NA	NA	NA	93741671	93764749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_18664.known	chr11	+	4094	8	FSM	ENSG00000182919.15	ENST00000528288.5	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	69.0356311432505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	NA	False	NA	NA	False	NA	NA	NA	93741590	93764749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93759741_93759859_93761514
transcript_18667.known	chr11	+	2417	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	67.1629149371671	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	NA	False	NA	29	True	AATAAA	-34	NA	93741593	93763102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
transcript_18673.known	chr11	+	2442	8	FSM	ENSG00000182919.15	ENST00000540113.5	2442	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	67.1234014365196	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	NA	False	NA	29	True	AATAAA	-34	NA	93741593	93763102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93741729_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_18679.known	chr11	-	1632	6	FSM	ENSG00000166012.17	ENST00000448108.7	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	26.081411004775	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTAGCTGGGATTACA	-5	True	NA	NA	False	NA	NA	NA	93741495	93735566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_18685.nic	chr11	+	521	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-57	61515	-57	-26777	5prime_fragment	FALSE	canonical	2	13	junction_3	6.64997911442	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAAGAAAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	93661624	93668843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_18686.nic	chr11	+	577	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-57	61459	-57	-26721	5prime_fragment	FALSE	canonical	2	13	junction_3	6.64997911442	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAGAAATATTACTGA	NA	False	NA	NA	False	CATAAA	-24	NA	93661624	93668899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_18689.nic	chr11	-	530	3	ISM	ENSG00000166012.17	ENST00000448108.7	1632	6	-42	2714	-42	-172	5prime_fragment	FALSE	canonical	3	194	junction_2	29	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGTACCAGCCAACAG	NA	False	NA	NA	False	TATAAA	-12	NA	93741537	93738280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_93738500_93739236_93739332_93741321
transcript_1869.known	chr1	+	2201	3	FSM	ENSG00000242125.3	ENST00000413987.1	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	97	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	NA	False	NA	24	True	AGTAAA	-17	NA	28505979	28510892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127_28508161_28508829
transcript_18691.known	chr11	+	2278	2	FSM	ENSG00000042429.12	ENST00000530819.1	2278	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	-4	True	NA	NA	False	NA	NA	NA	93784281	93789796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93784764_93788000
transcript_18692.known	chr11	-	538	2	FSM	ENSG00000166012.17	ENST00000529508.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCTGTGTTTGTTTTAC	-4	True	NA	NA	False	NA	NA	NA	93741494	93738966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93739332_93741321
transcript_18693.known	chr11	+	8014	30	FSM	ENSG00000166004.15	ENST00000325212.11	8014	30	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	11.9887977835514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGATTTCTTC	-8	True	NA	8	True	AATAAA	-16	NA	93661681	93730358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807_93668933_93669676_93669771_93675570_93675667_93679411_93679553_93683558_93683743_93683963_93684129_93687643_93687866_93691682_93691776_93691926_93692031_93695496_93695635_93696319_93696418_93696681_93700187_93702459_93702638_93702775_93702920_93706744_93706898_93721311_93721413_93721953_93722051_93723040_93723290_93724253_93724376_93725650_93725832_93726975_93727638_93728680_93728822_93729433_93729531_93729613_93729782_93729869_93729970_93730048_93730149_93730230
transcript_18694.known	chr11	-	1710	7	FSM	ENSG00000166012.17	ENST00000525928.5	1710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	149.639566960079	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTAGAAAGTCAGCAT	6829	False	NA	-38	True	ATTAAA	-13	NA	93734661	93730282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349
transcript_18695.known	chr11	-	3056	4	FSM	ENSG00000214376.6	ENST00000409977.2	3056	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGTCCTTTGTGTGTG	-18	True	NA	NA	False	AATAAA	-14	NA	93850618	93818231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_93820613_93820742_93820884_93820996_93821324_93850411
transcript_18698.known	chr11	+	2852	5	FSM	ENSG00000110218.9	ENST00000227638.8	2852	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	21.901769334919	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTAAGCTTATTTCAT	-41	True	NA	11	True	AATAAA	-23	NA	94128840	94181968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94129494_94153490_94153631_94178368_94178593_94179601_94180258_94180789
transcript_18700.known	chr11	+	570	2	FSM	ENSG00000250519.7	ENST00000515097.2	570	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATATCGCTAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	94238149	94279206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94238278_94278764
transcript_18704.known	chr11	-	2684	20	FSM	ENSG00000020922.13	ENST00000407439.7	2684	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	76.0500636973149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	-15	True	NA	13	True	AATAAA	-31	NA	94493843	94419865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492641_94492907_94493790
transcript_18705.nic	chr11	-	2786	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	0	134	combination_of_known_junctions	FALSE	canonical	3	156	junction_9	34.6251793799168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTATGTCTAAATTCAC	-16	True	NA	-18	True	AGTAAA	-12	NA	94493844	94419731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_18706.nic	chr11	-	2716	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_9	34.6251793799168	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	NA	False	NA	13	True	AATAAA	-31	NA	94493908	94419865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_18707.known	chr11	-	6841	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	60.7981082953999	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-16	True	NA	-17	True	AATAAA	-35	NA	94493844	94415569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_18708.known	chr11	-	2588	19	FSM	ENSG00000020922.13	ENST00000323977.7	2588	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	61.6524758446713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCATAATGAAAAACTATG	0	True	NA	3	True	AATAAA	-21	NA	94493874	94419875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_1871.known	chr1	+	185	2	FSM	ENSG00000242125.3	ENST00000447507.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTTAATCATTCTCAG	-4	True	NA	NA	False	NA	NA	NA	28506042	28508270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28506085_28508127
transcript_18711.nic	chr11	-	1544	11	ISM	ENSG00000020922.13	ENST00000323977.7	2588	19	-34	44248	-23	11092	5prime_fragment	FALSE	canonical	3	184	junction_7	27.8596482389854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAACAGGTAAGCTAG	NA	False	NA	NA	False	NA	NA	NA	94493908	94464123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_18716.known	chr11	+	587	4	FSM	ENSG00000168876.9	ENST00000544514.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	50.3388517946129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGTGACTGTGGATGG	14	True	NA	NA	False	NA	NA	NA	94494003	94498214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94494036_94496603_94496952_94497901_94497965_94498070
transcript_18718.known	chr11	+	1908	3	FSM	ENSG00000168876.9	ENST00000544612.6	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	-6	True	NA	2	True	AATAAA	-20	NA	94493983	94499578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94494036_94496603_94496952_94498070
transcript_18719.known	chr11	+	760	3	FSM	ENSG00000168876.9	ENST00000534911.1	760	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	46	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAATACCAGAGTGGCT	-6	True	NA	NA	False	NA	NA	NA	94493983	94498263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94494036_94496603_94497119_94498070
transcript_18720.nic	chr11	+	2894	3	NIC	ENSG00000168876.9	novel	587	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	51	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	20	True	NA	1	True	AATAAA	-19	NA	94494009	94499577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_94494036_94496603_94497965_94498070
transcript_18721.nic	chr11	+	1998	3	NIC	ENSG00000168876.9	novel	1908	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	49	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	39	False	NA	2	True	AATAAA	-20	NA	94494028	94499578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_94494171_94496603_94496952_94498070
transcript_18724.known	chr11	+	3002	2	FSM	ENSG00000168876.9	ENST00000544253.1	3002	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	18	True	NA	1	True	AATAAA	-19	NA	94494007	94499577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94494036_94496603
transcript_18726.known	chr11	+	8980	13	FSM	ENSG00000166025.18	ENST00000433060.3	8980	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	27.259427523132	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTAATGTTTTGCTT	-16	True	NA	98	True	AATAAA	-18	NA	94768355	94876748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94768561_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
transcript_18731.known	chr11	-	1522	7	FSM	ENSG00000150316.12	ENST00000279839.8	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	36.2832223241297	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTATCTTGGAGGAT	5	True	NA	NA	False	AATAAA	-17	NA	94973556	94962619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_18739.known	chr11	-	1113	6	FSM	ENSG00000150316.12	ENST00000621358.4	1113	6	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	36.9616016968962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAGACTGTAAAACGT	NA	False	NA	-53	True	ATTAAA	-21	NA	94973586	94963367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971488_94972054_94972194_94973497
transcript_1874.known	chr1	+	204	1	FSM	ENSG00000200087.1	ENST00000363217.1	204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTATACTAGATTTTAAG	-2	True	NA	9	True	NA	NA	NA	28508558	28508762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28508600_28508800
transcript_18745.known	chr11	+	2951	3	FSM	ENSG00000186280.7	ENST00000335080.6	2951	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTCAAATATTGTGT	17	True	NA	NA	False	ATTAAA	-25	NA	94973708	94999519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_94974069_94975653_94975749_94997023
transcript_18747.known	chr11	+	560	2	FSM	ENSG00000263465.5	ENST00000638426.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAGAATAAAATTAGA	202	False	NA	-21	True	NA	NA	NA	95068057	95069088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95068184_95068654
transcript_18752.known	chr11	+	2211	5	FSM	ENSG00000245552.8	ENST00000543150.3	2215	5	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	2.9474565306379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTCTGGCAGAATCT	NA	False	NA	NA	False	AATAAA	-12	NA	95230395	95234387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95230496_95231124_95232177_95232589_95232675_95232879_95232920_95233453
transcript_18753.known	chr11	+	1858	3	FSM	ENSG00000245552.8	ENST00000668554.2	1946	3	0	88	0	-88	multi-exon	FALSE	canonical	2	3	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAATCCTTATGCTATT	450	False	NA	NA	False	CATAAA	-28	NA	95231253	95234303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95232177_95232589_95232675_95233453
transcript_18754.known	chr11	-	2329	18	FSM	ENSG00000087053.20	ENST00000481642.6	2329	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_14	201.459226815761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGTAAGATCAGGGGC	348	False	NA	NA	False	NA	NA	NA	95924123	95835289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866402_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_18756.known	chr11	-	4629	17	FSM	ENSG00000087053.20	ENST00000675196.1	4629	17	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_16	190.945836561052	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	555	False	NA	-6	True	AATAAA	-16	NA	95923916	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_18757.known	chr11	-	3420	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	167.802897769973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	-1	True	NA	-1	True	ATTAAA	-28	NA	95924096	95834087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_18762.known	chr11	-	3350	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_15	95.6050672762113	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-5	True	NA	-2	True	ATTAAA	-27	NA	95924100	95834088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
transcript_18765.known	chr11	-	4632	16	FSM	ENSG00000087053.20	ENST00000676177.1	4632	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	177.88830453093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95923874
transcript_18766.known	chr11	-	4506	16	FSM	ENSG00000087053.20	ENST00000676440.1	4506	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_15	196.483711510366	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	607	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923691
transcript_18767.known	chr11	-	4504	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	139.641668407233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	607	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
transcript_18771.known	chr11	-	4582	16	FSM	ENSG00000087053.20	ENST00000675320.1	4582	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	171.287464677237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923874
transcript_18773.known	chr11	-	4495	15	FSM	ENSG00000087053.20	ENST00000346299.10	4495	15	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_14	89.5462769426273	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-12	True	NA	-4	True	AATAAA	-18	NA	95924107	95832879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
transcript_18774.known	chr11	-	4387	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_14	139.758702405107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	653	False	NA	-6	True	AATAAA	-16	NA	95923818	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
transcript_18778.known	chr11	-	4403	14	FSM	ENSG00000087053.20	ENST00000676272.1	4403	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	150.602105173999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95923874
transcript_18779.known	chr11	-	5412	14	FSM	ENSG00000087053.20	ENST00000675495.1	5412	14	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_13	92.7569197086997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	340	False	NA	-6	True	AATAAA	-16	NA	95924131	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
transcript_18788.known	chr11	-	4601	16	FSM	ENSG00000087053.20	ENST00000393223.8	4601	16	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_15	148.49128668788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914334_95923874
transcript_18789.known	chr11	-	4504	15	FSM	ENSG00000087053.20	ENST00000675981.1	4504	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	146.762615492238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	607	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923620
transcript_1879.known	chr1	+	1132	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	88.7703376106353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	4	True	NA	19	True	NA	NA	NA	28553098	28577744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_18801.known	chr11	+	3141	11	FSM	ENSG00000166037.11	ENST00000325542.10	3141	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	40.9336047765158	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGGCTCTGAGTCCT	-4	True	NA	27	True	ATTAAA	-21	NA	95790497	95832693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_18807.known	chr11	-	3823	11	FSM	ENSG00000077458.13	ENST00000398187.6	3823	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	65.3730831458942	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTAGTTTTCAATGG	1327	False	NA	-8	True	AATAAA	-16	NA	95789615	95768952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_18811.known	chr11	+	3098	10	FSM	ENSG00000166037.11	ENST00000325486.9	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	136.944433175569	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	-41	True	NA	25	True	ATTAAA	-19	NA	95790460	95832691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95827785_95828028_95829186_95829332_95831025
transcript_1882.known	chr1	+	1799	9	FSM	ENSG00000180098.9	ENST00000373830.4	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	12.2346843032422	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTCTTCTT	-10	True	NA	14	True	AATATA	-7	NA	28553084	28578545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_18820.known	chr11	-	2546	10	FSM	ENSG00000077458.13	ENST00000536839.1	2546	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	52.8459209213416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTCTCTTAATAATTT	1381	False	NA	NA	False	TTTAAA	-29	NA	95789561	95770114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_95771651_95775921_95776024_95778821_95778955_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_18831.nic	chr11	+	1034	8	NIC	ENSG00000166037.11	novel	2084	7	NA	NA	17	-1275	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	199.057678032457	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAATTAAAAAAAAGAAG	-24	True	NA	59	True	AATAGA	-44	NA	95790477	95821940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_95790744_95795515_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_18835.known	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	42.5143766533419	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	77	False	NA	11	True	AGTAAA	-18	NA	95790658	95823215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_18840.known	chr11	+	870	6	FSM	ENSG00000166037.11	ENST00000541365.5	870	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	190.864978453356	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTTAAAATGTGAGAA	20	True	NA	NA	False	NA	NA	NA	95790521	95818903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799236_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826
transcript_18842.nic	chr11	+	2474	2	ISM	ENSG00000166037.11	ENST00000538658.5	2084	7	-155	21750	6	-11514	5prime_fragment	FALSE	canonical	3	463	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGACTGAAGCCCACAG	2	True	NA	NA	False	AAAAAG	-17	NA	95790503	95801465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_95790744_95799231
transcript_18843.known	chr11	+	1936	11	FSM	ENSG00000166037.11	ENST00000540830.5	1936	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.168162132968	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTGTGGGTGTGATTT	31	True	NA	9	True	NA	NA	NA	95790532	95831543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_95790744_95799231_95799389_95812951_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_18849.known	chr11	-	2880	11	FSM	ENSG00000149231.16	ENST00000645500.1	2880	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	63.8063476466096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-4	True	NA	NA	False	AATAAA	-16	NA	96389948	96352778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96388694_96388830_96389843
transcript_18852.known	chr11	-	2611	10	FSM	ENSG00000149231.16	ENST00000646050.1	2611	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	51.3977469842962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAATAAAGTAAAATGG	23	False	96389944	NA	False	NA	NA	NA	96389921	96352804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359098_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18853.known	chr11	-	3156	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	44.3014365901448	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	12	True	NA	NA	False	AATAAA	-16	NA	96389880	96352778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
transcript_18854.known	chr11	-	2715	10	FSM	ENSG00000149231.16	ENST00000646818.2	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	30.8760964717584	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAACCCTGTGTGTTC	-20	True	NA	NA	False	AATAAA	-22	NA	96389912	96352772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18855.known	chr11	-	2563	10	FSM	ENSG00000149231.16	ENST00000647080.1	2563	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	56.0233637329161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGCAGAGTGAACAAATG	23	False	96389944	NA	False	AATAAA	-8	NA	96389921	96352786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96365126_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18864.known	chr11	-	2594	8	FSM	ENSG00000149231.16	ENST00000679960.1	2594	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	57.1885531574711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	23	False	96389944	NA	False	AATAAA	-16	NA	96389921	96352778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96389843
transcript_18868.known	chr11	-	5328	7	FSM	ENSG00000149231.16	ENST00000679696.1	5328	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	61.8376009308971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAGAGCCAAATCATGA	-25	True	NA	NA	False	NA	NA	NA	96389917	96349240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96389843
transcript_18873.known	chr11	-	3972	5	FSM	ENSG00000149231.16	ENST00000530106.2	3972	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	38.8908729652601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGTGCAGGTTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	96389956	96380538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_18877.known	chr11	-	2742	10	FSM	ENSG00000149231.16	ENST00000681164.1	2742	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	52.0234989638764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-13	True	NA	NA	False	AATAAA	-16	NA	96389905	96352778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387654_96389843
transcript_18878.known	chr11	+	3140	2	FSM	ENSG00000183340.7	ENST00000332349.5	3140	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAAAGGTTTAA	-14	True	NA	5	True	AATAAA	-20	NA	96390012	96393561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_96390074_96390482
transcript_18879.nic	chr11	+	3103	17	ISM	ENSG00000165895.19	ENST00000524892.7	7689	23	248550	3960	22703	1112	3prime_fragment	FALSE	canonical	3	146	junction_11	15.0784407350362	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTAGTTTACAGTCT	NA	False	NA	22	True	AATAAA	-23	NA	100936202	100989981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_100936333_100941783_100941885_100943758_100943869_100948456_100948536_100949916_100949957_100959882_100959946_100960914_100960990_100961683_100961769_100962408_100962468_100965670_100965777_100973174_100973335_100974458_100974604_100976056_100976438_100976814_100976972_100978986_100979050_100987512_100987593_100988712
transcript_18880.known	chr11	-	1865	2	FSM	ENSG00000248027.1	ENST00000501397.1	1865	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGTCTTATTT	NA	False	NA	0	True	TATAAA	-21	NA	100687955	100684161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_100685704_100687632
transcript_18881.known	chr11	+	2193	7	FSM	ENSG00000137691.13	ENST00000434758.7	2193	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	11.6285090283416	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAAATGTCTGTTTGC	-8	True	NA	NA	False	CATAAA	-14	NA	102047436	102084554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214_102081282_102083070
transcript_18883.known	chr11	+	845	6	FSM	ENSG00000137691.13	ENST00000526781.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	10.5185550338438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGGAGAACAATT	10	True	NA	NA	False	ATTAAA	-16	NA	102047454	102081435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214
transcript_18885.nnic	chr11	+	669	5	NNC	ENSG00000137691.13	novel	845	6	NA	NA	-38	-8725	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	15.2151240547029	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCCAGGAGTAAAAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	102047398	102067386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102067224
transcript_1889.known	chr1	+	1610	8	FSM	ENSG00000180098.9	ENST00000491577.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	12.2641005893341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTACAACACTGCTGC	11	True	NA	39	True	NA	NA	NA	28553105	28577764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28553138_28553639_28553738_28560632_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_18890.known	chr11	+	2617	10	FSM	ENSG00000110330.10	ENST00000532672.5	2617	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.088756048876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	-8	True	NA	23	True	AATAAA	-14	NA	102347246	102378669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102347377_102348597_102348765_102349877_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18891.nic	chr11	+	2531	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.088756048876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	-44	True	NA	24	True	AATAAA	-15	NA	102347210	102378670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_102347377_102348597_102348765_102350000_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18892.nnic	chr11	+	2186	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	104.088756048876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	-44	True	NA	24	True	AATAAA	-15	NA	102347210	102378670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_102347377_102348597_102348765_102350345_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18893.nnic	chr11	+	2181	10	NNC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.088756048876	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	-44	True	NA	24	True	AATAAA	-15	NA	102347210	102378670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_102347377_102348597_102348765_102350350_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18896.known	chr11	+	3764	9	FSM	ENSG00000110330.10	ENST00000227758.7	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	36.8162667852133	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	-41	True	NA	24	True	AATAAA	-15	NA	102347213	102378670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_102347377_102348597_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_18897.nnic	chr11	+	1214	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	11956	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	143.597431112894	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	NA	False	NA	24	True	AATAAA	-15	NA	102374697	102378670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_102374934_102377495_102377751_102377856_102377899_102377989
transcript_18898.nic	chr11	+	248	2	ISM	ENSG00000110330.10	ENST00000534646.5	562	3	-6	1556	0	-334	5prime_fragment	FALSE	canonical	3	389	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGGATATAGTTTGAAT	-44	True	NA	10	True	AATAAA	-28	NA	102347210	102348679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_102347377_102348597
transcript_18899.known	chr11	-	3304	5	FSM	ENSG00000152558.15	ENST00000398136.7	3304	5	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_4	27.4499544626216	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTGTGTGATTTTG	36	True	NA	-12	True	AATAAA	-19	NA	102452765	102396331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_102398892_102401538_102401693_102401915_102402207_102448811_102448869_102452523
transcript_18901.known	chr11	-	1759	10	FSM	ENSG00000166670.10	ENST00000279441.9	1759	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.955813918560292	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTAGAACAATTCATGT	-5	True	NA	NA	False	AATAAA	-27	NA	102780628	102770501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_102770894_102772011_102772116_102772846_102773007_102775187_102775322_102776279_102776425_102776611_102776777_102778623_102778750_102779212_102779362_102779503_102779746_102780486
transcript_18903.known	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	339.465486208143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-6	True	NA	-30	True	NA	NA	NA	103092177	103062170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
transcript_18904.known	chr11	-	12675	8	FSM	ENSG00000137692.12	ENST00000260247.10	12675	8	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_5	52.9358487381911	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGTAATCTTTTGTGT	11	True	NA	NA	False	AATAAA	-42	NA	103092160	103050685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091786
transcript_18906.known	chr11	-	727	7	FSM	ENSG00000137692.12	ENST00000529294.5	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	471.691989897362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGCAAACCTTTCA	344	False	NA	NA	False	AAAAAG	-31	NA	103091861	103062345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091683
transcript_1891.known	chr1	-	524	6	FSM	ENSG00000197989.15	ENST00000475441.6	524	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	27.0333127825651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	246	False	NA	NA	False	AATAAA	-27	NA	28581623	28578538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581093_28581230_28581589
transcript_18910.nic	chr11	+	1926	10	ISM	ENSG00000187240.17	ENST00000648198.1	4528	25	13	34317	-3	-34317	5prime_fragment	FALSE	canonical	1	1	junction_8	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTGTTTACAAAAATGAG	-11	True	NA	NA	False	AGTAAA	-12	NA	103109422	103121785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_103109770_103113536_103113708_103114102_103114239_103115176_103115296_103116569_103116715_103117630_103117864_103120446_103120582_103120688_103120803_103120924_103121037_103121371
transcript_18912.known	chr11	+	2994	11	FSM	ENSG00000152578.13	ENST00000393125.6	2994	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	18.088670487352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	10	False	NA	NA	False	AATAAA	-18	NA	105610028	105913110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_18914.known	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	17.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	28	False	NA	NA	False	AATAAA	-35	NA	105610120	105614436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_105610429_105610907_105611086_105612275
transcript_18916.known	chr11	+	367	3	FSM	ENSG00000152578.13	ENST00000527177.5	367	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAACATAAGCTAT	-5	True	NA	NA	False	NA	NA	NA	105609993	105612434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_105610024_105610907_105611086_105612275
transcript_18919.known	chr11	-	4103	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	40.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-6	True	NA	2	True	AATAAA	-43	NA	106022240	106007898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106010111_106010455_106011068_106020961
transcript_1892.known	chr1	-	1871	6	FSM	ENSG00000197989.15	ENST00000648127.1	1871	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	19.2561678430575	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	28582986	28578537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581110_28581230_28581589
transcript_18920.nic	chr11	-	3221	3	NIC	ENSG00000170903.12	novel	4103	3	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	38.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	2	True	NA	2	True	AATAAA	-43	NA	106022232	106007898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_106010111_106010455_106011068_106021835
transcript_18921.known	chr11	-	948	3	FSM	ENSG00000170903.12	ENST00000530788.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	29.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGATGAGCCTCATTTG	NA	False	NA	NA	False	NA	NA	NA	106022403	106009983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106010111_106010455_106011068_106022194
transcript_18927.known	chr11	+	2767	6	FSM	ENSG00000149313.11	ENST00000278618.9	2767	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_3	15.6665248220529	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGAGCCTGACACTG	-3	True	NA	21	True	AATAAA	-23	NA	106077661	106098695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_106077894_106079466_106079693_106090556_106090679_106091315_106091478_106094582_106094655_106096742
transcript_18930.known	chr11	+	1252	5	FSM	ENSG00000149313.11	ENST00000525660.1	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	222.081066279861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAACATGGAAACG	-7	True	NA	NA	False	AATGAA	-22	NA	106077657	106097298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_106077894_106079466_106079693_106091315_106091478_106094582_106094655_106096742
transcript_18933.known	chr11	-	3840	4	FSM	ENSG00000182359.15	ENST00000531837.2	3840	4	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_3	30.6195289897731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	-13	True	NA	NA	False	AATAAA	-19	NA	106077347	106051097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106054456_106058864_106059110_106076506_106076708_106077311
transcript_18935.known	chr11	-	3751	3	FSM	ENSG00000182359.15	ENST00000526793.5	3751	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	36.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	106077459	106051097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_106054456_106058864_106059110_106077311
transcript_18936.known	chr11	-	3278	18	FSM	ENSG00000152404.16	ENST00000282251.10	3244	18	-19	-15	-19	15	multi-exon	FALSE	canonical	3	91	junction_8	13.6247281805209	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATTTCTGGATT	NA	False	NA	3	True	ATTAAA	-36	NA	107457844	107326344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
transcript_18938.nnic	chr11	-	3182	17	NIC	ENSG00000152404.16	novel	3244	18	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_8	28.4076766693442	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATGATTCAAATTTGT	NA	False	NA	-12	True	ATTAAA	-21	NA	107457853	107326359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
transcript_1894.known	chr1	-	682	6	FSM	ENSG00000197989.15	ENST00000483436.5	682	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	33.807691432572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATATTTGTGTTTG	51	False	NA	NA	False	AATAAA	-20	NA	28581818	28578545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581093_28581230_28581589
transcript_18943.nnic	chr11	-	1496	7	NNC	ENSG00000152404.16	novel	2955	16	NA	NA	-19506	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	42.7200187265877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATGATTCAAATTTGT	NA	False	NA	-12	True	ATTAAA	-21	NA	107373236	107326359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107373103
transcript_18946.known	chr11	-	4067	12	FSM	ENSG00000137760.15	ENST00000428149.7	4067	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	5.38286230657726	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTCTGCTCATT	-4	True	NA	-1	True	AATAAA	-19	NA	107565735	107502726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565600
transcript_18947.known	chr11	-	2114	12	FSM	ENSG00000137760.15	ENST00000417449.6	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	9.21281895284235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTACCTGAACACATCA	-11	True	NA	NA	False	NA	NA	NA	107565742	107504657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565629
transcript_1895.known	chr1	-	550	6	FSM	ENSG00000197989.15	ENST00000531126.7	728	6	178	0	-72	0	multi-exon	FALSE	canonical	1	3	junction_2	29.8891284583542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	174	False	NA	NA	False	AATAAA	-28	NA	28581695	28578537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581110_28581230_28581589
transcript_18952.known	chr11	-	2769	8	FSM	ENSG00000110660.15	ENST00000525815.6	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	11.780301787479	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGGTTTCTTTG	8	True	NA	NA	False	ATTAAA	-25	NA	107858787	107790990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_18954.known	chr11	+	1885	2	FSM	ENSG00000179331.3	ENST00000320578.3	1885	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGTCAAAATTATTAAT	16	True	NA	NA	False	AGTAAA	-17	NA	107928447	107963482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_107928796_107961945
transcript_18955.known	chr11	+	6171	19	FSM	ENSG00000166266.14	ENST00000393094.7	6171	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	12.8582010146573	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTACCTATCCAGAAAA	-31	True	NA	13	True	AATAAA	-15	NA	108008897	108107761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189
transcript_18958.known	chr11	+	1498	13	FSM	ENSG00000075239.14	ENST00000673531.1	1498	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	131.529754766322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAGATAAGCTGTTTC	1	True	NA	8	True	NA	NA	NA	108121566	108147470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108127885_108127980_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_18960.known	chr11	+	1174	8	FSM	ENSG00000075239.14	ENST00000672367.1	1174	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	124.343828777716	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	1	True	NA	40	True	AATAAA	-37	NA	108121566	108147603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_18962.known	chr11	-	605	1	FSM	ENSG00000288012.1	ENST00000660738.1	605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGATGACTCTTAATATT	NA	False	NA	2	True	AGTAAA	-19	NA	108009282	108008677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_108008700_108009300
transcript_18963.known	chr11	+	1537	12	FSM	ENSG00000075239.14	ENST00000265838.9	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_7	17.9618512178883	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	1	True	NA	40	True	AATAAA	-37	NA	108121566	108147603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_18964.known	chr11	-	6113	18	FSM	ENSG00000149308.17	ENST00000278612.9	6113	18	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_11	13.9104899304017	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGATTCATAGTTAACT	-13	True	NA	-6	True	AATAAA	-15	NA	108222638	108157214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_108159020_108160879_108162015_108162119_108162181_108169743_108169853_108169927_108170044_108172198_108173852_108176245_108176375_108176993_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_18969.nic	chr11	+	1319	9	ISM	ENSG00000149311.20	ENST00000527805.6	9287	61	-14	116750	10	152	5prime_fragment	FALSE	canonical	3	17	junction_5	26.2380925373778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAATAGAACTAGGC	-13	True	NA	NA	False	NA	NA	NA	108223053	108249023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177_108229324_108235669_108235835_108243952_108244119_108244787_108245027_108246963_108247128_108248932
transcript_18973.known	chr11	+	442	4	FSM	ENSG00000149311.20	ENST00000683914.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	8.73053390247253	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGTGAGTTTTTTTT	31	False	NA	7	True	AATAAA	-16	NA	108223148	108229366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177
transcript_18974.known	chr11	+	560	4	FSM	ENSG00000149311.20	ENST00000526567.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.8094638358646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCGCGTGAGTTTTTT	10	False	NA	5	True	AATAAA	-14	NA	108223528	108229364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108223687_108227594_108227697_108227775_108227889_108229177
transcript_18977.known	chr11	+	3217	18	FSM	ENSG00000178105.12	ENST00000322536.8	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_10	18.9887965512211	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATGTTTGCATTGTG	-11	True	NA	-79	True	AATAAA	-21	NA	108665068	108940927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872_108918019_108940245
transcript_18979.nic	chr11	+	2354	15	ISM	ENSG00000178105.12	ENST00000526794.1	6707	17	-75	80767	-11	0	5prime_fragment	FALSE	canonical	3	186	junction_10	20.0917538166426	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTTTCCATCTTGAAT	-33	True	NA	36	True	AATATA	-27	NA	108665046	108841476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314
transcript_1898.known	chr1	-	1104	5	FSM	ENSG00000197989.15	ENST00000470977.6	1104	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	30.1413337462031	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-9	True	NA	NA	False	AATAAA	-28	NA	28581878	28578537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581093_28581230_28581589
transcript_18982.nic	chr11	+	2135	14	ISM	ENSG00000178105.12	ENST00000526794.1	6707	17	-75	83735	-11	-2968	5prime_fragment	FALSE	canonical	3	186	junction_10	20.585799666979	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATGAAGAGAAATTTTAA	-33	True	NA	NA	False	AAGAAA	-31	NA	108665046	108838508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445
transcript_18989.known	chr11	+	3144	4	FSM	ENSG00000137714.3	ENST00000260270.3	3144	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	31.6333157709821	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTGTATAAAGGTGAT	14	True	NA	NA	False	ATTAAA	-20	NA	110429947	110464884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_110430306_110435833_110435959_110456917_110457048_110462353
transcript_1899.known	chr1	-	1082	5	FSM	ENSG00000197989.15	ENST00000461832.2	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	20.7906228862918	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-4	True	NA	NA	False	AATAAA	-28	NA	28581873	28578537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581110_28581230_28581589
transcript_18992.known	chr11	-	5442	2	FSM	ENSG00000196167.10	ENST00000355430.4	5442	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACTAAATTAACTT	-4	True	NA	NA	False	AATAAA	-19	NA	111299814	111293445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111298667_111299593
transcript_18995.known	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	228.494259592373	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-5	True	NA	-5	True	AATAAA	-23	NA	111766382	111726907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_18996.nnic	chr11	-	1972	15	NIC	ENSG00000137713.16	novel	2082	16	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	180.347849831307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGCCGAACGAAATTT	282	False	NA	-10	True	AATAAA	-18	NA	111766399	111726912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_111727058_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_18998.known	chr11	-	5553	15	FSM	ENSG00000137713.16	ENST00000527614.6	5553	15	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_9	65.7296953982206	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCAGGTCTTTCCTGTG	-12	True	NA	NA	False	NA	NA	NA	111766389	111737876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_19.known	ERCC-00054	+	256	1	FSM	ERCC-00054A	DQ516731	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00054_+_0_300
transcript_19010.known	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	176.604127220966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	9	True	NA	33	True	NA	NA	NA	111766368	111741320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_19021.known	chr11	-	2294	15	FSM	ENSG00000137713.16	ENST00000534521.5	2294	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	240.579201180851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGGAAGCTCAGGGT	9	True	NA	30	True	NA	NA	NA	111766368	111741054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111761118_111761292_111764804_111764906_111765293_111765385_111766247
transcript_19022.known	chr11	-	2345	15	FSM	ENSG00000086848.15	ENST00000398006.6	2345	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	23.1257652934592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	2	True	NA	-12	True	AATAAA	-17	NA	111871301	111786283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_19023.known	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_5	13.5217134525872	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	15	True	NA	16	True	AATAAA	-45	NA	111871533	111786255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_19024.known	chr11	-	1930	15	FSM	ENSG00000086848.15	ENST00000531154.5	1930	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	26.4505699950157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	8563	False	NA	-12	True	AATAAA	-17	NA	111870865	111786283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_19025.known	chr11	-	6158	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_5	19.2937813815747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCTTAATGTGA	-1	True	NA	-19	True	AATAAA	-15	NA	111871581	111782194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_19026.known	chr11	+	509	5	FSM	ENSG00000137720.8	ENST00000530799.5	509	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.0133914338849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGAACTGGATCCTCC	42	False	NA	NA	False	NA	NA	NA	111879560	111883805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879606_111881484_111881616_111882367_111882599_111883135_111883203_111883770
transcript_19027.known	chr11	-	2774	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	4.30116263352131	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGTCTGTTTGACTC	4	True	NA	NA	False	AATAAA	-20	NA	111879165	111874055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
transcript_1903.known	chr1	-	1644	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	23.8932812499432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	12	False	NA	NA	False	AATAAA	-28	NA	28581857	28578537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
transcript_19030.known	chr11	+	534	4	FSM	ENSG00000137720.8	ENST00000528125.5	534	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	58.8179866669674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGATCTTAATATTG	-13	True	NA	NA	False	NA	NA	NA	111878934	111883900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879041_111882367_111882599_111883135_111883203_111883770
transcript_19031.known	chr11	+	2568	4	FSM	ENSG00000137720.8	ENST00000260276.8	2568	4	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_3	6.54896090146283	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCTGGGCTACTA	22	True	NA	NA	False	AATAAA	-14	NA	111879540	111885975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879606_111882367_111882599_111883135_111883203_111883770
transcript_19032.known	chr11	+	599	3	FSM	ENSG00000137720.8	ENST00000530214.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	54	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTATCCCTTTTTTT	23	True	NA	11	True	AATAAA	-22	NA	111879541	111884074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111879606_111882367_111882599_111883770
transcript_19033.known	chr11	+	1104	4	FSM	ENSG00000149300.10	ENST00000278601.6	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	1.88561808316413	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCGCGTTTTCTGGG	-12	True	NA	15	True	AATAAA	-15	NA	111918912	111926871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111919005_111924325_111924364_111925652_111925715_111925959
transcript_19034.known	chr11	-	1107	4	FSM	ENSG00000109846.9	ENST00000527899.6	1107	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGTCTTGTGTTTG	NA	False	NA	-2	True	AATAAA	-16	NA	111913347	111908625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913104
transcript_19035.known	chr11	-	774	3	FSM	ENSG00000109846.9	ENST00000650687.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTATGATTGCATTAT	-2	True	NA	60	True	AATAAA	-18	NA	111911770	111908563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111908968_111910326_111910450_111911523
transcript_19036.known	chr11	+	843	2	FSM	ENSG00000170276.6	ENST00000304298.4	843	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTACTGCTCCCTA	-5	True	NA	10	True	AATAAA	-16	NA	111912733	111914093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111912924_111913440
transcript_19037.known	chr11	-	941	4	FSM	ENSG00000109846.9	ENST00000616970.5	941	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGTGTTTGAA	84	False	NA	0	True	AATAAA	-18	NA	111913213	111908623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913138
transcript_19039.nic	chr11	+	1193	7	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-157	40205	-157	6453	5prime_fragment	FALSE	canonical	3	29	junction_5	6.8414585839246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGGAGGAAGCAAAGAA	9	True	NA	NA	False	NA	NA	NA	111937185	111982448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338
transcript_19040.known	chr11	+	1945	6	FSM	ENSG00000150764.14	ENST00000529225.5	1945	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	20.0459472213213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	2910	False	NA	NA	False	ATTAAA	-15	NA	111927143	111975995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_111927388_111929817_111929911_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_19044.nic	chr11	+	1982	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-157	46658	-157	0	5prime_fragment	FALSE	canonical	3	38	junction_2	4.43705983732471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	9	True	NA	NA	False	ATTAAA	-15	NA	111937185	111975995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_19047.known	chr11	+	3878	14	FSM	ENSG00000150768.17	ENST00000280346.11	3878	14	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_10	39.7495115522072	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTCTGTTGGTAATT	-17	True	NA	25	True	ATTAAA	-29	NA	112025407	112064404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_1905.known	chr1	-	1903	3	FSM	ENSG00000197989.15	ENST00000474814.1	1903	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	-2	True	NA	NA	False	AATAAA	-27	NA	28581871	28578538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28578681_28579532_28579982_28580559
transcript_19052.known	chr11	+	3871	14	FSM	ENSG00000150768.17	ENST00000681638.1	3871	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	170.982887825051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTGGTTTAATTTTT	6	True	NA	10	True	ATTAAA	-14	NA	112025430	112064389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028977_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_19053.known	chr11	+	3723	13	FSM	ENSG00000150768.17	ENST00000681339.1	3723	13	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_9	168.31815113053	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	1	True	NA	-4	True	AAAAAG	-44	NA	112025425	112064375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_19057.known	chr11	+	3552	12	FSM	ENSG00000150768.17	ENST00000680331.1	3552	12	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	184.402362796572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTGGTTTAATTTTT	15	True	NA	10	True	ATTAAA	-14	NA	112025439	112064389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112025752_112026197_112026300_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_19059.known	chr11	+	943	7	FSM	ENSG00000150776.18	ENST00000524989.1	943	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	36.4584999996191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTGAGAGCTCAGAGGA	-3	True	NA	NA	False	NA	NA	NA	112074315	112082945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112074886_112074917_112075566_112075651_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_19064.known	chr11	+	3686	6	FSM	ENSG00000150776.18	ENST00000393047.8	3686	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5.74108003776293	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	-20	True	NA	9	True	AATAAA	-19	NA	112074298	112085150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_1907.known	chr1	-	1359	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	194.431067476368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACAGGGTACCTTTG	5265	False	NA	-8	True	AATAAA	-13	NA	28643005	28603100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
transcript_19070.known	chr11	+	3739	6	FSM	ENSG00000150776.18	ENST00000532163.5	3739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.2117990804612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	NA	False	NA	9	True	AATAAA	-19	NA	112074286	112085150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074917_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_19073.known	chr11	+	2322	6	FSM	ENSG00000150776.18	ENST00000420986.6	2322	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	37.7655928061509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGGTCTTGGTTCTG	NA	False	NA	9	True	AGTAAA	-16	NA	112074085	112084134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_19078.known	chr11	+	809	6	FSM	ENSG00000150776.18	ENST00000525785.5	809	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.3555886046519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACACTAAGAAAACCAA	12	True	NA	NA	False	NA	NA	NA	112074330	112082822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_19079.known	chr11	-	1103	6	FSM	ENSG00000150773.12	ENST00000532211.5	1103	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	3.54400902933387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	264	False	NA	NA	False	ATTAAA	-21	NA	112073980	112067797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073929
transcript_19080.known	chr11	-	1090	6	FSM	ENSG00000150773.12	ENST00000280350.10	1090	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.87054001888146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	4	True	NA	NA	False	ATTAAA	-21	NA	112074017	112067797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073979
transcript_19082.known	chr11	+	517	5	FSM	ENSG00000150776.18	ENST00000531378.1	517	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34.0468427317424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAGAAAAAAAGGTCA	466	False	NA	NA	False	AAGAAA	-11	NA	112074784	112082568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074917_112075566_112075644_112080408_112080559_112081981_112082036_112082464
transcript_19083.known	chr11	+	355	5	FSM	ENSG00000150776.18	ENST00000526879.5	355	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	34.9669486801465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAATAAAAAGTTCTAT	-3	True	NA	-23	True	AATGAA	-41	NA	112074315	112080512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112074886_112074917_112075566_112075644_112078214_112078316_112080408
transcript_19084.known	chr11	+	3693	6	FSM	ENSG00000150776.18	ENST00000280352.13	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	31.0251510874645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	NA	False	NA	9	True	AATAAA	-19	NA	112074288	112085150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_19087.known	chr11	+	2246	4	FSM	ENSG00000150776.18	ENST00000530104.2	2246	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	35.9103822808329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAAAGCTTCTATTTT	-9	True	NA	NA	False	ATTAAA	-18	NA	112074309	112082427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408
transcript_19089.known	chr11	-	1155	3	FSM	ENSG00000150779.12	ENST00000509359.6	1155	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	68.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGATGTGTATTCCTTG	-1	False	NA	NA	False	AAGAAA	-31	NA	112086798	112084799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112085463_112085977_112086311_112086639
transcript_1909.known	chr1	-	1335	6	FSM	ENSG00000120656.14	ENST00000373824.9	1335	6	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_2	35.5718990215591	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTTATATGCCTAAAAA	-12	True	NA	NA	False	NA	NA	NA	28643067	28602849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642991
transcript_19090.known	chr11	-	741	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	75	False	NA	-32	True	AGTAAA	-13	NA	112086722	112085148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112085463_112085966_112086311_112086639
transcript_19093.known	chr11	-	805	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	2090	junction_1	0	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	-1	False	NA	NA	False	AAGAAA	-14	NA	112086798	112084816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112085463_112086639
transcript_19095.known	chr11	+	861	5	FSM	ENSG00000204370.13	ENST00000526592.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	886.034988022482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAGACTCACAGTATAA	0	True	NA	NA	False	NA	NA	NA	112086898	112095212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112093079_112093210_112094804
transcript_19096.known	chr11	+	1339	4	FSM	ENSG00000204370.13	ENST00000375549.8	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	838.192234646816	1969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGCTATCAGTAGTT	1	True	NA	27	True	AATAAA	-35	NA	112086872	112095794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112094804
transcript_19097.known	chr11	+	905	3	FSM	ENSG00000204370.13	ENST00000528048.5	905	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	947.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCTAAATCCTAGGA	1	True	NA	NA	False	TTTAAA	-28	NA	112086872	112095505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112086960_112087856_112087974_112094804
transcript_19099.known	chr11	-	1115	6	FSM	ENSG00000150782.12	ENST00000280357.12	1115	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.748331477354788	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAACTGTCTGAATT	-4	True	NA	NA	False	AATAAA	-29	NA	112164094	112143259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_112143818_112148602_112148737_112150071_112150207_112153591_112153604_112154974_112155062_112163905
transcript_19100.known	chr11	+	872	6	FSM	ENSG00000150787.8	ENST00000280362.8	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	30.2191991952136	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGGAGACAATATATATA	35	True	NA	7	True	AATAAA	-18	NA	112226427	112233973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112226527_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
transcript_19104.known	chr11	+	846	5	FSM	ENSG00000150787.8	ENST00000528679.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	190.793573004963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGCTTATGTGACTT	-26	True	NA	-57	True	AATATA	-6	NA	112226366	112233909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112226527_112228593_112228674_112230625_112230683_112233162_112233234_112233431
transcript_19107.known	chr11	+	3011	2	FSM	ENSG00000250303.5	ENST00000666993.1	3011	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAGGTAATAAAATC	-24	True	NA	NA	False	AAAAAG	-27	NA	112290263	112294084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_112290510_112291319
transcript_19109.known	chr11	-	949	4	FSM	ENSG00000255129.7	ENST00000526487.6	949	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGGTCTGAAAACC	NA	False	NA	NA	False	NA	NA	NA	113314482	113278249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113278744_113279489_113279650_113280490_113280633_113314329
transcript_19112.nic	chr11	+	2359	23	NIC	ENSG00000149292.17	novel	2256	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	8.99644098592455	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	-4	True	NA	18	True	AATAAA	-18	NA	113314582	113366387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_113314619_113315950_113316054_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_19113.known	chr11	+	2256	22	FSM	ENSG00000149292.17	ENST00000529221.6	2256	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.9354043622411	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	-4	True	NA	18	True	AATAAA	-18	NA	113314582	113366387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_19117.nic	chr11	+	945	11	NIC	ENSG00000149292.17	novel	2256	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	12.1741529479467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATTGAGATCCTGACTG	-4	True	NA	NA	False	NA	NA	NA	113314582	113339439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_113314619_113315950_113316054_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285
transcript_1912.known	chr1	+	1950	2	FSM	ENSG00000188060.8	ENST00000373826.3	1950	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATCTCAGAATCTGCC	NA	False	NA	4	True	AATAAA	-15	NA	28592199	28595443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28592400_28593693
transcript_19121.known	chr11	-	2873	16	FSM	ENSG00000086827.9	ENST00000200135.8	2873	16	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_9	28.9367125522809	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	21	True	NA	-5	True	AATAAA	-16	NA	113773692	113733186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_19123.known	chr11	-	4669	25	FSM	ENSG00000048028.11	ENST00000003302.8	4669	25	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	118.559342560312	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	-4	True	NA	-11	True	AATAAA	-15	NA	113875570	113797873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113806488_113806585_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_19126.known	chr11	-	3431	22	FSM	ENSG00000048028.11	ENST00000545540.5	3431	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_21	89.406686302287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAGATTAGAAATATAAA	-4	True	NA	NA	False	AATACA	-26	NA	113875570	113798804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
transcript_19127.known	chr11	-	1900	15	FSM	ENSG00000048028.11	ENST00000537706.5	1900	15	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_14	37.3849937154206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGTTCTGTTTCTT	-10	True	NA	NA	False	AATAAA	-14	NA	113875528	113813754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_19131.known	chr11	+	2205	9	FSM	ENSG00000166736.12	ENST00000504030.7	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	6.68837611083587	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	0	True	NA	5	True	AATAAA	-19	NA	113975107	113990313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113986729_113986824_113987047_113989464
transcript_19132.known	chr11	+	1385	8	FSM	ENSG00000166736.12	ENST00000510849.5	1385	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	10.8684152009201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGACCCAGGGAATG	178	False	NA	NA	False	NA	NA	NA	113975285	113989832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986517_113986729_113986824_113987047_113989464
transcript_19133.known	chr11	+	8494	7	FSM	ENSG00000109906.15	ENST00000335953.9	8494	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.37436854187255	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGGTACGATTCCCT	-16	True	NA	NA	False	AATAAA	-15	NA	114059710	114256765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114059883_114063210_114064569_114156336_114156435_114186951_114187039_114242166_114242338_114247197_114247366_114250325
transcript_19136.known	chr11	+	1080	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	0	0	0	0	multi-exon	TRUE	canonical	3	662	junction_4	79.7718970286877	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	-12	True	NA	32	True	AATAAA	-39	NA	114439466	114450279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_19137.known	chr11	+	791	7	FSM	ENSG00000076043.11	ENST00000539754.5	791	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	289.953300837681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGATGGCTTGGCAGAG	-8	True	NA	NA	False	NA	NA	NA	114439470	114450039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444585_114444653_114445978_114446088_114447825_114447880_114449845
transcript_1914.known	chr1	+	1912	10	FSM	ENSG00000162419.13	ENST00000294409.2	1912	10	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	12.4731811064211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	1	True	NA	-75	True	NA	NA	NA	28668779	28714873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_19144.known	chr11	+	664	6	FSM	ENSG00000076043.11	ENST00000539119.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	317.153338308144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGTTAACTTGCATCTC	49	False	NA	NA	False	NA	NA	NA	114439581	114450062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_19145.known	chr11	+	1908	5	FSM	ENSG00000076053.12	ENST00000542140.5	1908	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	261.32678297488	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGTGTGTTATTTT	3	True	NA	6	True	TATAAA	-2	NA	114400665	114408909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114400768_114401697_114401861_114402831_114402916_114405705_114405800_114407444
transcript_19146.known	chr11	+	4243	5	FSM	ENSG00000076053.12	ENST00000540163.5	4243	5	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_3	144.987930532165	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGTACAAAATTCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	114400029	114410607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405708_114405800_114407444
transcript_19148.known	chr11	+	449	5	FSM	ENSG00000076043.11	ENST00000538198.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	340.78915769138	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATGAAAAGAAGAGGAAAA	13	True	NA	NA	False	AAGAAA	-6	NA	114439545	114449917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114445978_114446088_114447825_114447880_114449845
transcript_19149.known	chr11	+	539	4	FSM	ENSG00000076043.11	ENST00000543131.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	392.65789463886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTTCGGTTAACTTG	32	True	NA	NA	False	NA	NA	NA	114439510	114450056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114445978_114446088_114447825_114447880_114449845
transcript_19150.known	chr11	+	452	3	FSM	ENSG00000076043.11	ENST00000544196.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTTTTTTTCTGTT	-13	True	NA	4	True	AATAAA	-16	NA	114439465	114441902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114441744
transcript_19152.known	chr11	+	848	3	FSM	ENSG00000076043.11	ENST00000544010.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGCAAAGATGGCAG	24	False	NA	NA	False	AAGAAA	-4	NA	114439434	114444378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114443855
transcript_19153.known	chr11	+	710	3	FSM	ENSG00000076043.11	ENST00000539275.5	710	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	341.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	5	True	NA	32	True	AATAAA	-39	NA	114439483	114450279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655_114440740_114449845
transcript_19154.known	chr11	+	552	2	FSM	ENSG00000076043.11	ENST00000543243.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTATATGTCTTTGT	16	True	NA	NA	False	NA	NA	NA	114439494	114441026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_114439676_114440655
transcript_19155.known	chr11	-	1980	1	FSM	ENSG00000180425.11	ENST00000623205.2	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTCCTAAGGAACT	41	False	114400529	NA	False	AATAAA	-19	NA	114400511	114398531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_114398500_114400500
transcript_19158.nnic	chr11	-	2368	11	NNC	ENSG00000137656.12	novel	2192	10	NA	NA	-60	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	51.3759671441813	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	116773047	116748172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_116748576_116756227_116756344_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_19160.known	chr11	-	2192	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	18.0315224667563	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	0	True	NA	-10	True	AATAAA	-22	NA	116772987	116748172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_19161.known	chr11	-	1793	10	FSM	ENSG00000137656.12	ENST00000375445.7	1793	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	43.4914494221509	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTAACTGGGTATTCT	0	True	NA	-7	True	AATAAA	-25	NA	116772987	116748169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762954_116763267_116765361_116765447_116770128_116770223_116772821
transcript_19166.nic	chr11	-	2601	4	ISM	ENSG00000137656.12	ENST00000260210.5	2192	10	-60	12898	-60	-12898	5prime_fragment	FALSE	canonical	3	107	junction_3	16.2138486760204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATGTAAGGAATT	NA	False	NA	NA	False	NA	NA	NA	116773047	116761070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_116763267_116765361_116765447_116770128_116770223_116772821
transcript_19167.nic	chr11	-	1480	13	ISM	ENSG00000109917.11	ENST00000227322.8	6539	14	474	4761	-213	-840	3prime_fragment	TRUE	canonical	3	537	junction_3	38.7359293450179	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTTGGTTTTGAGT	4870	False	NA	-10	True	AATAAA	-13	NA	116787549	116778559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_116779060_116779771_116779838_116782157_116782245_116782918_116783030_116783529_116783620_116784377_116784449_116784854_116784922_116785098_116785147_116785513_116785637_116785795_116785883_116786510_116786582_116786968_116787060_116787481
transcript_19168.known	chr11	-	1471	3	FSM	ENSG00000110244.7	ENST00000357780.5	1471	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGCCGGATGAATCCT	-1	True	NA	NA	False	AATAAA	-23	NA	116823304	116820699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_116821882_116822658_116822786_116823142
transcript_19169.known	chr11	-	899	4	FSM	ENSG00000118137.10	ENST00000236850.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	96.2439031258027	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	0	True	NA	-1	True	AATAAA	-18	NA	116837622	116835750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837604
transcript_1917.known	chr1	+	6358	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.7284080571728	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	5	True	NA	18	True	AATAAA	-22	NA	28668783	28719353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_19170.known	chr11	-	940	4	FSM	ENSG00000118137.10	ENST00000375320.5	940	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	224.287018497876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	71	False	NA	-1	True	AATAAA	-18	NA	116837586	116835750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837527
transcript_19171.known	chr11	+	4175	6	FSM	ENSG00000168092.14	ENST00000527958.6	4175	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	15.2262930485394	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGTGTCTTTCTGTC	-3	True	NA	28	True	TATAAA	-19	NA	117144286	117171045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117167420
transcript_19175.known	chr11	+	4396	26	FSM	ENSG00000149577.16	ENST00000324225.9	4396	26	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_10	7.44515950131359	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGGGCCCTTGTTTG	3	True	NA	25	True	AATAAA	-13	NA	117178742	117197442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117179447_117181415_117181538_117181806_117181972_117182059_117182106_117182518_117182621_117182722_117182807_117183778_117183879_117184073_117184140_117186129_117186224_117186583_117186637_117187377_117187450_117187627_117187700_117188707_117188827_117189168_117189243_117189334_117189402_117189951_117190026_117190165_117190290_117190622_117190741_117191877_117192015_117192253_117192363_117192573_117192651_117192819_117192867_117193152_117193259_117193852_117193964_117195801_117195916_117196003
transcript_19177.known	chr11	-	4197	17	FSM	ENSG00000160613.15	ENST00000320934.8	4197	17	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_16	21.6440486912685	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTAGCCTGTCATGCCG	5	True	NA	NA	False	NA	NA	NA	117232073	117204336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117206357_117206680_117206799_117207066_117207161_117207969_117208065_117208896_117209054_117218465_117218569_117219056_117219165_117219590_117219759_117223207_117223309_117224077_117224217_117224700_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376_117229857_117230348_117230469_117232026
transcript_19180.known	chr11	+	1048	6	FSM	ENSG00000149591.17	ENST00000525531.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	614.659450427633	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTTACCCGAAAGCATC	9	False	NA	NA	False	NA	NA	NA	117199381	117204541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117199433_117199632_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_19185.known	chr11	+	3786	5	FSM	ENSG00000149591.17	ENST00000392951.9	3786	5	0	0	0	0	multi-exon	FALSE	canonical	3	1162	junction_1	53.8348168010257	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	-3	True	NA	NA	False	ATTAAA	-18	NA	117199369	117207464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117199433_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_19187.known	chr11	+	1477	5	FSM	ENSG00000149591.17	ENST00000278968.10	1477	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	537.758019466005	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTCAGGCCTGGCTG	21	False	NA	8	True	NA	NA	NA	117199393	117204782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_19197.known	chr11	+	3477	15	FSM	ENSG00000167257.11	ENST00000300650.9	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	12.0384163986695	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAACTTTTTAAAAAAA	10	True	NA	NA	False	ATTAAA	-15	NA	117232670	117286454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_192.known	chr1	+	681	1	FSM	ENSG00000248527.1	ENST00000514057.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	149	False	NA	46	True	NA	NA	NA	633695	634376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_633700_634400
transcript_19200.known	chr11	+	1706	15	FSM	ENSG00000167257.11	ENST00000531287.5	1706	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	28.0378752579362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAAGAAGAAGAGAAAC	5	False	NA	NA	False	NA	NA	NA	117232735	117285164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117232776_117234266_117234380_117238600_117238647_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_19201.known	chr11	+	2695	15	FSM	ENSG00000167257.11	ENST00000531452.5	2695	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	21.2954196474074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTAGTTTGACTTCTT	5	False	NA	24	True	GATAAA	-31	NA	117232735	117285688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117232776_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_19206.nnic	chr11	+	1319	8	NIC	ENSG00000110274.16	novel	5629	33	NA	NA	-2	8715	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	11.6057691494799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAATGAGAAGAGTGA	-13	True	NA	NA	False	NA	NA	NA	117327847	117371253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789_117351989_117361834_117361994_117362403_117362539_117371079
transcript_19210.nic	chr11	+	1093	6	ISM	ENSG00000167257.11	ENST00000300650.9	3477	15	-8	39442	-8	172	5prime_fragment	FALSE	canonical	3	46	junction_1	15.7149610244506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTAGTTTCTTTCC	2	True	NA	33	True	AATAAA	-44	NA	117232662	117247012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808
transcript_19213.known	chr11	+	585	5	FSM	ENSG00000110274.16	ENST00000527609.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	11.6270159542335	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGAGACCCCCCCAAA	224	False	NA	NA	False	AAAAAG	-17	NA	117328084	117351959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789
transcript_19214.known	chr11	+	5629	33	FSM	ENSG00000110274.16	ENST00000278935.8	5629	33	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.3278779286222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGGGTTGCCCTTGCT	-7	True	NA	30	True	AATAAA	-31	NA	117327853	117413266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117327905_117335604_117335681_117338565_117338669_117344165_117344278_117351789_117351989_117361834_117361994_117362403_117362539_117363428_117363507_117371079_117371467_117373750_117373832_117375707_117375792_117380613_117380706_117381700_117381869_117382795_117382943_117387202_117387413_117390776_117390909_117390998_117391216_117392225_117392304_117392495_117392628_117393003_117393127_117394349_117394494_117394919_117395004_117395122_117395192_117395546_117395723_117396053_117396181_117396549_117396612_117397090_117397314_117407924_117408033_117408889_117409029_117409617_117409966_117410827_117410895_117411794_117411918_117412071
transcript_19217.known	chr11	+	492	4	FSM	ENSG00000110274.16	ENST00000533570.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.7194104181711	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAGACCCCCCCAAAA	242	False	NA	NA	False	AAAAAG	-18	NA	117328102	117351960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_117328209_117338565_117338669_117344165_117344278_117351789
transcript_19222.known	chr11	-	579	9	FSM	ENSG00000137726.17	ENST00000530956.6	579	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	191.328537795594	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACAGCCCTTTCCCCA	-1	True	NA	NA	False	AAGAAA	-12	NA	117876689	117838207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117844109_117844207_117876591
transcript_19226.known	chr11	-	1678	8	FSM	ENSG00000137726.17	ENST00000526014.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_7	44.0903525011251	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCGGAGGTGCTTTCC	-18	True	NA	-9	True	AATAAA	-18	NA	117876658	117836980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_19228.known	chr11	-	669	7	FSM	ENSG00000137726.17	ENST00000584394.5	669	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	163.285707342138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGCCACATGGCCATCT	-24	True	NA	NA	False	NA	NA	NA	117876664	117837945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117838278_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_19229.known	chr11	-	656	7	FSM	ENSG00000137726.17	ENST00000540359.6	656	7	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_6	41.3870618537834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCATGCCAACACCAGGAA	3	True	NA	NA	False	GGGGCT	-45	NA	117876729	117839576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_19230.known	chr11	-	991	6	FSM	ENSG00000137731.14	ENST00000534383.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.49857113690718	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACCTGCCTGCCTGTCT	-2	True	NA	-10	True	AATAAA	-25	NA	117824744	117820146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117824161
transcript_19233.known	chr11	-	2592	9	FSM	ENSG00000137747.16	ENST00000526090.1	2592	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31695671910659	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCAGAGCAGTTAGATC	NA	False	NA	NA	False	NA	NA	NA	117929459	117907453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_117908785_117909805_117909969_117910706_117910751_117911767_117911861_117913776_117913907_117914391_117914515_117917169_117917275_117918408_117918839_117929286
transcript_19234.known	chr11	-	3983	6	FSM	ENSG00000160588.10	ENST00000278949.9	3983	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.28952211790544	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGTGTGTGCATATC	-37	True	NA	-5	True	AATAAA	-22	NA	118252365	118226689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118237049_118237261_118240210_118240378_118252221
transcript_19235.known	chr11	-	2622	6	FSM	ENSG00000149573.9	ENST00000278937.7	2622	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.78273291792038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTATATACATATCTA	12	True	NA	2	True	AATAAA	-33	NA	118264297	118253415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118255234_118257237_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_19239.known	chr11	-	1370	5	FSM	ENSG00000149573.9	ENST00000438295.2	1370	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.96865172858795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTATCTGCTTATTCT	NA	False	NA	-4	True	AATAAA	-37	NA	118264536	118256910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_19240.known	chr11	-	1531	4	FSM	ENSG00000149573.9	ENST00000529376.5	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.31245915016974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATGCTGCTATAAACAT	26	True	NA	NA	False	NA	NA	NA	118264283	118259236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118260202_118262437_118262649_118262930_118263098_118264095
transcript_19242.known	chr11	-	1819	13	FSM	ENSG00000118096.10	ENST00000264020.6	1819	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	24.2498568151557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-6	True	NA	NA	False	AGTAAA	-17	NA	118566035	118544542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118557737_118557891_118559784_118559865_118564964_118565062_118565789
transcript_19244.known	chr11	-	1562	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_9	9.78022967838606	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-11	True	NA	NA	False	AGTAAA	-17	NA	118565931	118544542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
transcript_19248.known	chr11	+	3994	10	FSM	ENSG00000095139.15	ENST00000264028.5	3994	10	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_3	89.8356524128614	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTGTGAGAGTATTCA	1	True	NA	23	True	ATTAAA	-30	NA	118572408	118603033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118572551_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_1925.known	chr1	+	2744	5	FSM	ENSG00000198492.16	ENST00000373812.8	2744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	95.4761095772131	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	-11	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_19250.known	chr11	+	1456	9	FSM	ENSG00000149582.16	ENST00000354284.8	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.7182815193799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	2	True	NA	NA	False	NA	NA	NA	118531198	118546484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
transcript_19256.known	chr11	+	2395	8	FSM	ENSG00000149582.16	ENST00000359862.8	2395	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.1573309531525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTCTGCTTCATTTC	83	False	NA	18	True	AATAAA	-18	NA	118531087	118535832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_19257.known	chr11	+	2228	8	FSM	ENSG00000149582.16	ENST00000442938.6	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	24.0586019238569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGATAAGTGTTATCA	83	False	NA	NA	False	AATAAA	-13	NA	118531087	118547280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118546118
transcript_19261.known	chr11	+	908	7	FSM	ENSG00000118058.24	ENST00000533790.3	1672	7	252	512	-188	-356	multi-exon	FALSE	canonical	1	1	junction_2	7.4535599249993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAAGACCAGTGAAAAGA	257	False	NA	NA	False	AAAAAG	-12	NA	118436743	118481736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118436945_118468774_118468845_118474178_118474316_118476804_118476983_118477966_118478202_118480173_118480239_118481714
transcript_19263.known	chr11	+	575	5	FSM	ENSG00000167283.9	ENST00000529770.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	3093.62756323382	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	-2	True	NA	88	True	AATAAA	-17	NA	118401618	118409199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401718_118403923_118403986_118405656_118405710_118406936_118407098_118408999
transcript_19266.known	chr11	+	900	4	FSM	ENSG00000167283.9	ENST00000529790.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	3357.44466323224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTAGAGTACTTGT	4	True	NA	NA	False	NA	NA	NA	118401609	118409577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401718_118405656_118405710_118406936_118407098_118408999
transcript_19268.known	chr11	+	1121	3	FSM	ENSG00000167283.9	ENST00000300688.8	1121	3	0	0	0	0	multi-exon	FALSE	canonical	3	6643	junction_1	273.5	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTCTGGAGCGATT	0	True	NA	10	True	AATAAA	-17	NA	118401605	118409847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401718_118406936_118407098_118408999
transcript_19270.known	chr11	+	457	3	FSM	ENSG00000167283.9	ENST00000529460.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3590.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	12	False	NA	88	True	AATAAA	-17	NA	118401632	118409199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118401729_118406936_118407098_118408999
transcript_19274.known	chr11	+	6088	20	FSM	ENSG00000110344.10	ENST00000252108.8	6088	20	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_11	27.3358105311718	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTATCACTTTATTC	-10	True	NA	15	True	AATAAA	-19	NA	118359599	118399211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118359675_118365039_118365202_118368630_118368805_118369422_118369536_118371513_118371667_118372506_118372667_118373085_118373289_118373493_118373686_118374895_118375230_118376573_118376695_118379445_118379751_118381390_118381524_118382588_118382777_118384634_118384736_118384831_118384946_118386437_118386613_118389724_118389906_118390656_118390805_118392737_118392896_118396313
transcript_19275.nic	chr11	+	3006	13	NIC	ENSG00000019144.20	novel	3128	15	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	3	53	junction_1	44.8431680662977	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	1933	False	NA	40	True	AATAAA	-15	NA	118634940	118658025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_118635164_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_19278.nic	chr11	+	546	2	ISM	ENSG00000019144.20	ENST00000527500.5	483	4	-83	3522	-37	-3522	5prime_fragment	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGATGTGATTGTAAT	1933	False	NA	NA	False	ATTAAA	-16	NA	118634940	118635715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_118635164_118635392
transcript_1928.nnic	chr1	+	529	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	0	19	combination_of_known_splicesites	FALSE	canonical	3	73	junction_3	514.0972670614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAACAAAAAATC	-11	True	NA	NA	False	AAAAAG	-7	NA	28736939	28769144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_19281.nnic	chr11	-	2562	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_13	94.2790770993131	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCCAAGTAAAAATTTCT	-11	True	NA	-26	True	AATACA	-16	NA	118790989	118751364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_19282.known	chr11	-	6128	14	FSM	ENSG00000110367.14	ENST00000534980.7	6128	14	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	37.0002398840776	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-16	True	NA	-4	True	AATAAA	-20	NA	118791164	118747762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_19286.known	chr11	-	6152	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	105.445911427074	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTATGTC	-7	True	NA	-7	True	AATAAA	-17	NA	118790948	118747765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_19287.nnic	chr11	-	2017	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	-41	-545	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_13	94.2790770993131	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCACTGTGTGCTG	-11	True	NA	-4	True	AATATA	-15	NA	118790989	118751909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_1929.nnic	chr1	+	1173	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	73	junction_3	514.0972670614	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	113	False	NA	22	True	AATAAA	-23	NA	28736926	28769775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_19293.nnic	chr11	-	1945	13	NNC	ENSG00000110367.14	novel	1936	13	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_12	96.5480234563781	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-11	True	NA	NA	False	AATAAA	-13	NA	118790989	118754588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_19294.nic	chr11	-	1968	13	ISM	ENSG00000110367.14	ENST00000534980.7	6128	14	-59	6826	-59	0	5prime_fragment	FALSE	canonical	3	333	junction_3	29.7324878429864	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	1613	False	NA	NA	False	AATAAA	-13	NA	118791223	118754588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_193.known	chr1	-	6432	16	FSM	ENSG00000228327.4	ENST00000506640.2	6432	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	36.6232470191028	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGGAGTGAGTTTCT	13	True	NA	NA	False	NA	NA	NA	778626	725884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_729805_733306_733365_735422_735614_743179_743351_744194_744392_744727_744826_746694_746819_756076_756142_758966_759124_764722_765248_766328_766388_768547_768614_769496_769713_772975_773108_774170_774281_778283
transcript_1930.nic	chr1	+	1921	4	NIC	ENSG00000198492.16	novel	358	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	550.75120416472	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAAGA	643	False	NA	NA	False	NA	NA	NA	28737737	28769125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737798_28738258_28738339_28742402_28743987_28768928
transcript_19302.nnic	chr11	+	989	2	Antisense	novelGene_ENSG00000110367.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATTGTGCAAGTCAAG	NA	False	NA	5	True	AATAAA	-14	NA	118719837	118754936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_+_118720348_118754457
transcript_19303.nnic	chr11	-	1371	2	NNC	ENSG00000287238.1	novel	1286	2	NA	NA	8225	4030	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-4	True	ATTAAA	-17	NA	118721187	118717073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_118717450_118720192
transcript_19304.known	chr11	-	1286	2	FSM	ENSG00000287238.1	ENST00000664961.1	1286	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	118729412	118721103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118722076_118729098
transcript_19305.known	chr11	-	738	2	FSM	ENSG00000110367.14	ENST00000533239.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTTGTATAAATGGTT	-1	True	NA	NA	False	NA	NA	NA	118791149	118785832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_118786519_118791097
transcript_19307.nnic	chr11	+	851	3	NIC	ENSG00000110375.3	novel	958	6	NA	NA	-189	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTTCCCTTTAGTGG	511	False	NA	9	True	AATAAA	-21	NA	118924974	118958559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_118925292_118957597_118957669_118958096
transcript_19308.known	chr11	+	934	5	FSM	ENSG00000110375.3	ENST00000264031.3	934	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.62916512459885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTTCCCTTTAGTGG	1	True	NA	9	True	AATAAA	-21	NA	118956297	118958559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118956427_118956882_118957015_118957207_118957347_118957597_118957669_118958096
transcript_1931.nic	chr1	+	2571	4	NIC	ENSG00000198492.16	novel	358	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	550.75120416472	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	643	False	NA	22	True	AATAAA	-23	NA	28737737	28769775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737798_28738258_28738339_28742402_28743987_28768928
transcript_19310.known	chr11	+	1254	11	FSM	ENSG00000186166.9	ENST00000334418.6	1254	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	68.1073417481552	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTATCTACCTCCTAC	-20	True	NA	6	True	ATTAAA	-18	NA	118998137	119015793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011284_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
transcript_19315.known	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_3	7512.68984369114	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-23	True	NA	-10	True	AATAAA	-17	NA	119018678	119015711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
transcript_19318.known	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	7693.60458432847	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	8776	False	NA	-10	True	AATAAA	-17	NA	119018330	119015711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
transcript_19319.known	chr11	-	483	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	8537	junction_1	4545.01470707191	3756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATGAGTATGTCT	-2	True	NA	-15	True	AATAAA	-12	NA	119018343	119015716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
transcript_19328.known	chr11	-	2032	11	FSM	ENSG00000137700.18	ENST00000538950.5	2032	11	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	125.517488821279	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-26	True	NA	-2	True	ATTAAA	-22	NA	119030906	119024350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119028734_119028835_119029391_119029565_119030848
transcript_1933.nic	chr1	+	2584	4	NIC	ENSG00000198492.16	novel	657	3	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	566.25808799718	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	662	False	NA	22	True	AATAAA	-23	NA	28737756	28769775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_28737830_28738258_28738339_28742402_28743987_28768928
transcript_19331.known	chr11	-	2102	10	FSM	ENSG00000137700.18	ENST00000330775.9	2102	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	100.873346820483	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-26	True	NA	-2	True	ATTAAA	-22	NA	119030906	119024350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030848
transcript_19335.known	chr11	-	1912	9	FSM	ENSG00000137700.18	ENST00000638360.1	1912	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	102.30950285775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGTTGGATATAGGTGG	-10	True	NA	-75	True	NA	NA	NA	119030890	119024423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027771_119028193_119028427_119029221_119029565_119030848
transcript_19337.known	chr11	-	2040	9	FSM	ENSG00000137700.18	ENST00000527992.5	2040	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	70.7149869193228	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAGAAGATTAAAACTA	0	True	NA	-39	True	AAGAAA	-10	NA	119030880	119024387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030848
transcript_19349.known	chr11	+	583	5	FSM	ENSG00000196655.12	ENST00000528230.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	447.146718091501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGAGAGTTCCTGCA	-6	True	NA	NA	False	NA	NA	NA	119018765	119023421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019189_119020149_119020254_119021759_119021887_119023320
transcript_19351.known	chr11	+	1425	5	FSM	ENSG00000196655.12	ENST00000533632.6	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_2	100.131163980052	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCCACAACCCAATAGCT	-6	True	NA	NA	False	AGTAAA	-39	NA	119018765	119024134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021759_119021887_119023320
transcript_19352.known	chr11	+	849	5	FSM	ENSG00000196655.12	ENST00000359005.8	849	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	450.206896881867	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCTTAATCGATGGT	-6	True	NA	33	True	AATAAA	-25	NA	119018765	119023672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021873_119021887_119023320
transcript_19354.known	chr11	+	768	5	FSM	ENSG00000196655.12	ENST00000525079.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	450.563189242086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGCTGAACCTGTTATG	18	True	NA	NA	False	NA	NA	NA	119018789	119023394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019425_119020149_119020254_119021759_119021887_119023320
transcript_19355.known	chr11	+	817	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	502.260888383716	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	23	True	NA	20	True	AATAAA	-12	NA	119018794	119023659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
transcript_19358.known	chr11	+	654	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	524.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	-6	True	NA	3	True	CATAAA	-7	NA	119018765	119023642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119018971_119021759_119021887_119023320
transcript_19359.known	chr11	-	4598	26	FSM	ENSG00000149428.20	ENST00000617285.5	4598	26	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_25	157.510055552019	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-7	True	NA	-6	True	AATAAA	-16	NA	119057205	119044187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_19361.known	chr11	-	4367	26	FSM	ENSG00000149428.20	ENST00000652093.1	4367	26	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	282.027051184811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTCTGTATGTTTGAA	-4	True	NA	67	True	NA	NA	NA	119057227	119044310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
transcript_19363.known	chr11	-	325	1	FSM	ENSG00000272186.1	ENST00000607709.1	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGATTGTGAACCATAGT	NA	False	NA	NA	False	AATAAA	-25	NA	119067698	119067373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119067400_119067700
transcript_19364.known	chr11	+	3181	16	FSM	ENSG00000160695.16	ENST00000621676.5	3181	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.2556547240586	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGGATTTTTTTCTGG	16	True	NA	18	True	AATAAA	-20	NA	119067817	119081972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119068011_119069195_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
transcript_19365.nnic	chr11	+	1452	15	NNC	ENSG00000256269.11	novel	1505	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	201.402391915756	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTGCGCGTGTGGA	NA	False	NA	15	True	AATAAA	-15	NA	119084859	119093547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109_119093274_119093345
transcript_19369.known	chr11	+	1505	14	FSM	ENSG00000256269.11	ENST00000652429.1	1505	14	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_9	53.3932602178064	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCGCGTGTGGAGT	-16	True	NA	17	True	AATAAA	-17	NA	119084880	119093549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19372.known	chr11	+	1448	14	FSM	ENSG00000256269.11	ENST00000442944.7	1448	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	207.652873749273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	-14	True	NA	-20	True	GGGGCT	-39	NA	119084882	119093512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19376.known	chr11	+	1559	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	204.764780625515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCCTACTAATAAACCA	-12	True	NA	-16	True	GGGGCT	-43	NA	119084884	119093516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19379.known	chr11	+	1351	13	FSM	ENSG00000256269.11	ENST00000544387.5	1351	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	212.214252322715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGCGCGTGTGGAG	17	True	NA	16	True	AATAAA	-16	NA	119084913	119093548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_19382.known	chr11	+	1283	13	FSM	ENSG00000256269.11	ENST00000640813.1	1283	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	291.079742796827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAGTCCAAGCAACAG	1	True	NA	-49	True	GGGGCT	-10	NA	119084897	119093483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091860_119091875_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19385.nic	chr11	+	1468	13	NIC	ENSG00000256269.11	novel	1505	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	206.678275883611	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTGCGCGTGTGGA	NA	False	NA	15	True	AATAAA	-15	NA	119084861	119093547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_1939.nic	chr1	+	702	3	ISM	ENSG00000159023.22	ENST00000482464.6	2154	14	-41	72296	-13	-61074	5prime_fragment	FALSE	canonical	3	43	junction_1	147	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGAATTAAAAGCTTC	-36	True	NA	75	True	AGTAAA	-26	NA	28887077	28993440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_28887211_28987447_28987906_28993329
transcript_19393.known	chr11	+	1347	12	FSM	ENSG00000256269.11	ENST00000543090.5	1347	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	293.550001372484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTGAAGGTGTTGTG	33	False	NA	1	True	AATAAA	-1	NA	119084929	119093533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19395.nic	chr11	+	990	9	ISM	ENSG00000256269.11	ENST00000652429.1	1505	14	-21	1819	-6	89	5prime_fragment	FALSE	canonical	3	680	junction_1	53.6130522820703	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTGGTGTCAGATGAT	NA	False	NA	7	True	NA	NA	NA	119084859	119091730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412
transcript_19396.known	chr11	+	1936	14	FSM	ENSG00000256269.11	ENST00000650101.1	1936	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.846652519448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	19	False	NA	-20	True	GGGGCT	-39	NA	119085221	119093512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119085894_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_19397.known	chr11	-	1614	1	FSM	ENSG00000188486.4	ENST00000530167.2	1592	1	-2	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAGAGTTGTAGAATT	-3	True	NA	-3	True	ATTAAA	-40	NA	119095467	119093853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119093900_119095500
transcript_1940.known	chr1	-	2300	6	FSM	ENSG00000116350.18	ENST00000373795.7	2300	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	44.2791147156309	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGGTGTTTGAATTGA	-30	True	NA	-14	True	AATAAA	-22	NA	29181900	29147742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_19403.known	chr11	-	1760	9	FSM	ENSG00000172269.20	ENST00000682811.1	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	138.533163899479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_19404.known	chr11	-	1719	9	FSM	ENSG00000172269.20	ENST00000639704.1	1719	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	145.02020333388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAAGTGTTCTGAT	0	True	NA	-95	True	NA	NA	NA	119101837	119096594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100751_119101017_119101139_119101494
transcript_19407.known	chr11	-	1813	9	FSM	ENSG00000172269.20	ENST00000640747.1	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	140.324400942958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAAATTAAGTGTTCTG	-19	True	NA	-97	True	NA	NA	NA	119101856	119096596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100828_119101017_119101139_119101494
transcript_19410.nnic	chr11	-	1732	9	NNC	ENSG00000172269.20	novel	1913	9	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_8	139.434348350756	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	648	False	NA	-10	True	AATAAA	-18	NA	119101501	119096509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101323
transcript_19412.known	chr11	-	1913	9	FSM	ENSG00000172269.20	ENST00000354202.9	1913	9	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_8	48.2310519789896	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-16	True	NA	-10	True	AATAAA	-18	NA	119101853	119096509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_1942.known	chr1	-	1264	5	FSM	ENSG00000116350.18	ENST00000466448.4	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	235.644329445883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGTGTCAAAGGAGCG	-12	True	NA	NA	False	NA	NA	NA	29181882	29148670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29149227_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_19420.known	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000392834.7	1817	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	151.455523207984	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-1	True	NA	-10	True	AATAAA	-18	NA	119101878	119096509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
transcript_19421.known	chr11	-	1791	8	FSM	ENSG00000172269.20	ENST00000682791.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	154.53604031132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100878_119101494
transcript_19424.known	chr11	-	1689	8	FSM	ENSG00000172269.20	ENST00000682946.1	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	143.590119607791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_19438.nnic	chr11	+	2114	11	NNC	ENSG00000172273.13	novel	3185	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.7695978397314	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	-23	True	NA	28	True	AATAAA	-19	NA	119121568	119135054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_119121640_119126934_119126994_119130724_119130955_119131534_119131647_119131829_119131983_119132242_119132298_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_19442.nnic	chr11	+	2300	11	NNC	ENSG00000172273.13	novel	3185	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	54.706855146316	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	-15	True	NA	28	True	AATAAA	-19	NA	119121576	119135054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_119121640_119123567_119123685_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_19446.known	chr11	+	3185	10	FSM	ENSG00000172273.13	ENST00000350777.7	3185	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	16.5864737394996	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGTCTATTTGTGG	-12	True	NA	NA	False	AATAAA	-28	NA	119121579	119136059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_19453.known	chr11	+	3716	10	FSM	ENSG00000160703.16	ENST00000409991.5	3716	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	25.4252717673665	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	8	True	NA	12	True	ATTAAA	-18	NA	119168727	119184012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_19456.known	chr11	-	3327	16	FSM	ENSG00000076706.17	ENST00000264036.6	3327	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	5.39382362831168	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACATTGCTTTTTATTC	-2	True	NA	-4	True	AATAAA	-19	NA	119317130	119308528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119309916_119310348_119310467_119310755_119310904_119311089_119311186_119311279_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
transcript_19459.known	chr11	+	2783	1	FSM	ENSG00000173456.5	ENST00000311413.5	2783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTCTGTGTGCATC	2	True	NA	17	True	AATAAA	-17	NA	119334526	119337309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119334500_119337300
transcript_19463.known	chr11	+	1012	4	FSM	ENSG00000245248.8	ENST00000656292.1	1012	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.20144916122817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTGGATCAGGGATT	3	True	NA	NA	False	AATAAA	-13	NA	119381806	119413108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119381909_119394980_119395155_119410677_119410776_119412470
transcript_19464.known	chr11	+	555	3	FSM	ENSG00000245248.8	ENST00000656105.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATGTCTCATACTTC	6	True	NA	4	True	TTTAAA	-7	NA	119381809	119409765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119381909_119394980_119395155_119409483
transcript_19465.known	chr11	-	897	4	FSM	ENSG00000154096.14	ENST00000528295.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	516.431559410882	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTGGGATGGTGGGGTA	2	True	NA	70	True	NA	NA	NA	119423172	119419072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119419521_119420050_119420379_119420868_119420930_119423112
transcript_19466.known	chr11	-	602	4	FSM	ENSG00000154096.14	ENST00000532974.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	519.259943466554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCCTGCTCTCCCT	1	True	NA	NA	False	NA	NA	NA	119423199	119419464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119419521_119420050_119420449_119420868_119420930_119423112
transcript_19467.known	chr11	-	578	4	FSM	ENSG00000154096.14	ENST00000580275.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	525.388110511331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCAGTGCAGAGATCC	2	True	NA	NA	False	NA	NA	NA	119423198	119419374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119419521_119420050_119420336_119420868_119420930_119423112
transcript_19470.known	chr11	-	581	4	FSM	ENSG00000154096.14	ENST00000524970.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	527.764046605004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAAGTGGGGACCCCA	2	True	NA	NA	False	NA	NA	NA	119423172	119419307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_119419432_119420050_119420387_119420868_119420930_119423112
transcript_19481.known	chr11	+	523	4	FSM	ENSG00000254854.1	ENST00000533253.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTAGTGGGAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	119729582	119739623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_119729807_119733656_119733751_119736806_119736919_119739530
transcript_19482.nic	chr11	+	609	4	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-35	-184	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	19.2006944318862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	NA	False	NA	18	True	AATAAA	-13	NA	120325260	120330634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_120325369_120327440_120327641_120329976_120330050_120330406
transcript_19483.known	chr11	+	3930	4	FSM	ENSG00000181264.9	ENST00000529187.1	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	24.2624538467705	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	8	True	NA	NA	False	AGTAAA	-16	NA	120325306	120333682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120327121_120327641_120329976_120330050_120330406
transcript_19485.known	chr11	+	3980	3	FSM	ENSG00000181264.9	ENST00000375095.3	3980	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTCTTTATATTTAT	0	True	NA	NA	False	AGTAAA	-20	NA	120325298	120333686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120327440_120327641_120329976
transcript_19486.known	chr11	+	1434	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	27.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGATGTTCAGGCAGTT	-3	True	NA	NA	False	NA	NA	NA	120325295	120330818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120327121_120327641_120329976
transcript_19488.nnic	chr11	+	923	3	NNC	ENSG00000181264.9	novel	1434	3	NA	NA	-3	-184	intron_retention	FALSE	canonical	0	0	junction_1	34.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	-6	True	NA	18	True	AATAAA	-13	NA	120325292	120330634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_120325369_120327451_120327641_120329976
transcript_19490.known	chr11	+	3776	2	FSM	ENSG00000181264.9	ENST00000531346.1	3776	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	-3	True	NA	NA	False	AGTAAA	-13	NA	120325295	120333679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_120325369_120329976
transcript_19492.nnic	chr11	-	881	3	Antisense	novelGene_ENSG00000109927.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGTACTTTCTTCA	NA	False	NA	-10	True	AATAAA	-18	NA	121198641	121187473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr11_-_121187985_121193670_121193929_121198529
transcript_19494.known	chr11	+	2258	5	FSM	ENSG00000109929.10	ENST00000392789.2	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	272.607203683248	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATCAGTTGAGTATTAT	79	False	NA	NA	False	AATAAA	-18	NA	121292851	121308633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_121293079_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_19496.known	chr11	+	6854	5	FSM	ENSG00000109929.10	ENST00000264027.9	6854	5	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	87.3194565947361	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	-2	True	NA	14	True	AATAAA	-25	NA	121292770	121313410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_19497.known	chr11	+	6865	14	FSM	ENSG00000154127.10	ENST00000284273.6	6865	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	6.23314294765628	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGCAATGTCATTTTA	-1	True	NA	NA	False	AATAAA	-19	NA	122655721	122814473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_122656211_122776218_122776273_122777023_122777211_122779496_122779696_122783052_122783223_122789099_122789309_122794701_122794835_122796155_122796277_122796910_122797034_122798941_122799035_122801187_122801333_122806409_122806517_122808066_122808177_122809748
transcript_19519.known	chr11	-	2264	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_5	2043.38068146271	13853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-1	True	NA	NA	False	AATAAA	-26	NA	123062136	123057488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_1952.nic	chr1	-	1463	11	NIC	ENSG00000116353.16	novel	2515	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	88.5013559218162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	5505	False	NA	-2	True	AATAAA	-24	NA	29230958	29193816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29220837_29220922_29230730
transcript_19524.known	chr11	-	2004	8	FSM	ENSG00000109971.14	ENST00000453788.6	2004	8	0	0	0	0	multi-exon	FALSE	canonical	2	383	junction_1	2472.30562472378	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	655	False	NA	NA	False	AATAAA	-26	NA	123062335	123057488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123057829_123058766_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_19548.known	chr11	-	1884	6	FSM	ENSG00000109971.14	ENST00000534319.5	1884	6	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_5	2411.23594863713	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACAATTGCTTTGAGT	2604	False	NA	NA	False	AATAAA	-17	NA	123060386	123057497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115
transcript_19549.known	chr11	-	2186	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_5	2153.0990100176	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	1658	False	NA	NA	False	AATAAA	-18	NA	123061332	123057496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
transcript_19551.nic	chr11	-	3629	9	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	37.5699347883384	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-31	True	NA	-3	True	AGTAAA	-14	NA	123741680	123724779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740233_123740416_123740537_123741548
transcript_19556.known	chr11	-	3384	7	FSM	ENSG00000166261.11	ENST00000529691.1	3384	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	26.0154868406408	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-22	True	NA	-3	True	AGTAAA	-14	NA	123741671	123724779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123741548
transcript_19565.known	chr11	+	4300	19	FSM	ENSG00000110002.16	ENST00000456829.7	4300	19	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	67.0373030483775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGGCCCTACCTATG	-3	True	NA	NA	False	AGTAAA	-45	NA	124115449	124147721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_19567.known	chr11	+	3419	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_12	61.0468082930481	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	266	False	NA	17	True	ATTAAA	-27	NA	124115403	124146909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_19572.known	chr11	+	1978	11	FSM	ENSG00000110002.16	ENST00000449321.5	1978	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	68.6393473162442	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	266	False	NA	18	True	AATAAA	-20	NA	124115403	124124841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_19574.known	chr11	+	1863	10	FSM	ENSG00000110002.16	ENST00000361352.9	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	41.3951151170709	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	266	False	NA	18	True	AATAAA	-20	NA	124115403	124124841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_19578.known	chr11	+	5144	9	FSM	ENSG00000154144.13	ENST00000441174.8	5144	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	63.3541632412583	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATCATCTGCATTT	-13	True	NA	3	True	AATAAA	-23	NA	124622863	124635926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626472_124626610_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_1958.known	chr1	-	2515	10	FSM	ENSG00000116353.16	ENST00000263702.11	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_9	24.3447461820136	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTCTCCCTTATCA	-20	True	NA	NA	False	NA	NA	NA	29230934	29192656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29230730
transcript_19582.known	chr11	+	1634	8	FSM	ENSG00000154144.13	ENST00000473629.6	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	69.2611149261714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	2950	False	NA	32	True	AATAAA	-11	NA	124622835	124632434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626812_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_19583.known	chr11	+	4468	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	49.4912896892174	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	-2	True	NA	14	True	AATAAA	-22	NA	124622874	124635398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_19584.known	chr11	+	2142	7	FSM	ENSG00000154144.13	ENST00000529543.5	2142	7	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	79.1306935813573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAAGGACCCAGAAGTA	82	False	NA	NA	False	NA	NA	NA	124622993	124633424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124623234_124624930_124625002_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_19585.known	chr11	+	3604	5	FSM	ENSG00000064199.7	ENST00000227135.7	3604	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	13.2759180473518	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCACTTCCACTGACATC	-5	True	NA	NA	False	NA	NA	NA	124673903	124697518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124673953_124675237_124675419_124681388_124681460_124691695_124691783_124694302
transcript_1959.known	chr1	-	2416	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	67.4190873071813	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTAATGCTGTAAAGA	-10	True	NA	-4	True	ATTAAA	-22	NA	29230924	29192872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
transcript_19590.nic	chr11	+	237	2	ISM	ENSG00000154144.13	ENST00000452080.5	730	5	158	1945	63	-1945	5prime_fragment	FALSE	canonical	3	176	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAGAAGGTGAGCTGG	145	False	NA	NA	False	NA	NA	NA	124623056	124624990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_+_124623234_124624930
transcript_19591.known	chr11	-	1163	7	FSM	ENSG00000019102.12	ENST00000326621.10	1163	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCTCCTTCTTCTTTC	1	True	NA	-1	True	ATTAAA	-15	NA	124752255	124747473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_124747668_124748389_124748535_124748643_124748764_124749707_124749867_124750713_124750922_124751422_124751581_124752076
transcript_19592.known	chr11	-	1191	6	FSM	ENSG00000019102.12	ENST00000403470.1	1191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.62480768092719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTTCATATATTTTAA	0	True	NA	NA	False	AATAAA	-21	NA	124752193	124748105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_124748535_124748643_124748764_124749707_124749867_124750713_124750922_124751422_124751581_124752076
transcript_19594.known	chr11	-	2528	4	FSM	ENSG00000120458.13	ENST00000674284.1	2528	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	49.6051072639367	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	NA	False	NA	NA	False	ATTAAA	-14	NA	124800706	124766497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_124768029_124772993_124773055_124774718_124774819_124799870
transcript_19599.known	chr11	+	1645	11	FSM	ENSG00000154134.15	ENST00000525482.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.0838239667918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	-15	True	NA	13	True	AATAAA	-15	NA	124876841	124881465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124876933_124877160_124877185_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_19600.nic	chr11	+	1682	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	30.7312544488506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	11	True	NA	14	True	AATAAA	-16	NA	124876824	124881466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_124876933_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_19605.nnic	chr11	+	951	6	NIC	ENSG00000154134.15	novel	2272	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	38.2862899743498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	12	True	NA	14	True	AATAAA	-16	NA	124876825	124881466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_124876933_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_19606.known	chr11	-	2052	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAGCCTAGTTATAA	24	False	NA	-26	True	AATAAA	-4	NA	124953966	124949204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_124950560_124951338_124951551_124953481
transcript_19610.known	chr11	+	3924	16	FSM	ENSG00000149548.15	ENST00000529051.5	3924	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.00476028616731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTATTTCCTTGCAG	-14	True	NA	NA	False	AATAAA	-20	NA	124954120	125041487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_124954371_124954723_124954910_124959114_124959265_124959814_124960004_124975095_124975210_124977477_124977601_124986741_124986889_124987126_124988135_124991460_124991584_124992579_124992688_124993168_124993244_125003866_125003960_125005108_125005213_125038430_125038605_125038887_125039070_125040589
transcript_19613.known	chr11	-	848	7	FSM	ENSG00000150433.10	ENST00000529583.5	848	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	46.6538672923621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCATCACTAAGACAAAT	7	True	NA	NA	False	NA	NA	NA	125111604	125097485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125110490_125110550_125110643_125110747_125111538
transcript_19623.known	chr11	-	734	5	FSM	ENSG00000150433.10	ENST00000529609.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	51.1395150544078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGCCAAATTGTCCC	-10	True	NA	NA	False	NA	NA	NA	125111621	125097441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101257_125102131_125102352_125102733_125102810_125111538
transcript_19625.known	chr11	-	1828	5	FSM	ENSG00000150433.10	ENST00000531909.5	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	42.6321474945844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTACAACGGTCTC	20	True	NA	NA	False	NA	NA	NA	125111708	125096544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111538
transcript_19629.known	chr11	-	3805	5	FSM	ENSG00000150433.10	ENST00000682305.1	3805	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	31.5792653492763	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGTATGAATAACAAAC	-15	True	NA	NA	False	ATTAAA	-16	NA	125111626	125094388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111538
transcript_19631.nic	chr11	-	1313	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	41.811332195949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111826	125097034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111584
transcript_19632.nic	chr11	-	1248	5	NIC	ENSG00000150433.10	novel	706	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	42.722944655068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111763	125097034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111586
transcript_19633.known	chr11	-	1034	5	FSM	ENSG00000150433.10	ENST00000279968.8	1034	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	46.6442654567526	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	149	False	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102131_125102352_125102636_125102810_125111538
transcript_19634.nic	chr11	-	1155	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	44.073801742078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	23	True	NA	-21	True	AATAAA	-17	NA	125111588	125097034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102352_125102733_125102810_125111538
transcript_19637.known	chr11	-	773	5	FSM	ENSG00000150433.10	ENST00000531851.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	51.744564931981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTGGTTCTTTTTGAT	22	True	NA	NA	False	AAAAAG	-7	NA	125111589	125097256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125110490_125110550_125111538
transcript_19643.nic	chr11	-	1680	4	NIC	ENSG00000150433.10	novel	1828	5	NA	NA	-23	0	intron_retention	FALSE	canonical	3	72	junction_3	27.7408643620842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-3	True	NA	-21	True	AATAAA	-17	NA	125111731	125097034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102131_125102810_125111538
transcript_19644.nnic	chr11	-	1259	4	NIC	ENSG00000150433.10	novel	1828	5	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	49.8620318701737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111815	125097034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125097741_125101200_125101304_125102636_125102810_125111538
transcript_19645.known	chr11	-	857	4	FSM	ENSG00000150433.10	ENST00000531262.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	45.5850852801659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGATGTTGGTCATTG	-6	True	NA	-128	True	NA	NA	NA	125111617	125097141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125111538
transcript_19651.known	chr11	+	3642	13	FSM	ENSG00000165495.16	ENST00000298282.14	3642	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	2.05986784905138	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGCACAATTCTCTT	-1	True	NA	30	True	AGTAAA	-19	NA	125164750	125433389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125164777_125235044_125235116_125331818_125331926_125351283_125351393_125367845_125367986_125385550_125385723_125397873_125398063_125410195_125410326_125410778_125410877_125411745_125411866_125429011_125429089_125429962_125430142_125431165
transcript_19655.nic	chr11	-	1729	10	NIC	ENSG00000149557.14	novel	4583	10	NA	NA	115	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	118.775231237643	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGTGCTTTGG	5	True	NA	-8	True	AATAAA	-16	NA	125495550	125445752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125495387
transcript_19656.nic	chr11	-	1760	10	NIC	ENSG00000149557.14	novel	4583	10	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_9	119.379672360245	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGTGCTTTGG	304	False	NA	-8	True	AATAAA	-16	NA	125496029	125445752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125495835
transcript_19657.known	chr11	-	4583	10	FSM	ENSG00000149557.14	ENST00000278919.8	4583	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_6	98.1817412810939	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTTACT	-13	True	NA	NA	False	AATACA	-27	NA	125496265	125442880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
transcript_19661.known	chr11	-	1053	2	FSM	ENSG00000149557.14	ENST00000366139.3	1053	2	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTGATGTGGCCTTTG	-25	True	NA	NA	False	AGTAAA	-8	NA	125496277	125488926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125489823_125496120
transcript_19662.known	chr11	-	569	2	FSM	ENSG00000149557.14	ENST00000527534.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCGAGAACCTAGCTCC	211	False	NA	NA	False	AATGAA	-43	NA	125496122	125489540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125489823_125495835
transcript_19669.known	chr11	+	1747	11	FSM	ENSG00000149547.15	ENST00000618552.4	1747	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	393.109259621292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTCTTGCTCCACTGC	10	True	NA	NA	False	NA	NA	NA	125569457	125584209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125575250_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19671.known	chr11	+	2191	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_9	82.8483554453557	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	29	True	NA	22	True	ATTAAA	-22	NA	125569476	125584684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19673.known	chr11	+	1544	11	FSM	ENSG00000149547.15	ENST00000534546.5	1544	11	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	393.109259621292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTATTTTGTGAATT	10	True	NA	NA	False	NA	NA	NA	125569457	125584060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125575304_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_19677.known	chr11	+	1625	10	FSM	ENSG00000149547.15	ENST00000527235.6	1625	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	412.438817011418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	41	True	NA	NA	False	NA	NA	NA	125569488	125584242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125582345_125582421_125583520
transcript_19684.known	chr11	+	4173	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	383.137361339665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	6	True	NA	-20	True	AATGAA	-11	NA	125592857	125622721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_19687.known	chr11	+	2402	19	FSM	ENSG00000134910.14	ENST00000529196.5	2402	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	391.758287156195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	-16	True	NA	23	True	NA	NA	NA	125592835	125620888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125593637_125593726_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_19693.known	chr11	+	4501	18	FSM	ENSG00000134910.14	ENST00000392708.9	4501	18	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_9	114.597505362438	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTGGGACCCAAAAAAGC	0	True	NA	NA	False	NA	NA	NA	125592851	125623091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_197.nnic	chr1	+	1382	7	NNC	ENSG00000228794.11	novel	5333	7	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	34.7918413169269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCACCTACTGTGAAGA	750	False	NA	NA	False	AATAAA	-17	NA	827585	854096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853479_853527
transcript_19702.known	chr11	+	2160	17	FSM	ENSG00000134910.14	ENST00000531491.5	2160	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	306.023072812737	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	15	True	NA	23	True	NA	NA	NA	125592866	125620888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125592919_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_19708.nic	chr11	+	2206	15	NIC	ENSG00000149554.14	novel	1845	14	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_13	100.266507114687	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	4762	False	NA	20	True	AATAAA	-16	NA	125625742	125676255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125656205_125656336_125675927
transcript_19715.known	chr11	+	1845	14	FSM	ENSG00000149554.14	ENST00000428830.6	1845	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	98.6919179799248	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	-4	True	NA	20	True	AATAAA	-16	NA	125625973	125676255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
transcript_1972.known	chr1	-	571	4	FSM	ENSG00000116353.16	ENST00000483435.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	16.1314048434171	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	NA	False	NA	-2	True	AATAAA	-24	NA	29200589	29193816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515
transcript_19725.known	chr11	+	4128	13	FSM	ENSG00000149554.14	ENST00000438015.7	4128	13	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	56.0674197333492	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	4182	False	NA	23	True	AATAAA	-25	NA	125625162	125657147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_1973.known	chr1	-	2177	8	FSM	ENSG00000162511.8	ENST00000294507.4	2177	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.35526185435788	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGATGTGTTTCT	6	True	NA	-8	True	AATAAA	-16	NA	30757774	30732468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30733918_30735172_30735266_30737603_30737700_30738939_30739063_30739808_30739938_30741639_30741717_30742455_30742550_30757658
transcript_19733.known	chr11	+	3390	13	FSM	ENSG00000149554.14	ENST00000532449.6	3390	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.76102178907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAATTTGTATAGAAT	224	False	NA	NA	False	NA	NA	NA	125626228	125656845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626643_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_19739.known	chr11	+	3513	13	FSM	ENSG00000149554.14	ENST00000534070.5	3513	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.5623732115341	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	-46	True	NA	23	True	AATAAA	-25	NA	125626340	125657147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626576_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_19743.known	chr11	+	1653	12	FSM	ENSG00000149554.14	ENST00000544373.5	1653	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	104.094442179023	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAGATGAACCAATAAAG	-1	True	NA	-29	True	AAAAAG	-24	NA	125625976	125655710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626013_125626748_125626834_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_1975.known	chr1	-	3936	22	FSM	ENSG00000134644.16	ENST00000440538.6	3936	22	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_10	125.154181556182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	15	True	NA	5	True	AAAAAG	-5	NA	31065684	30932843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_19752.known	chr11	+	668	7	FSM	ENSG00000149554.14	ENST00000527013.6	668	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	130.070173368071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACCAACCCAGTGACA	13	False	NA	NA	False	TTTAAA	-34	NA	125626001	125635435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125626030_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428
transcript_19754.known	chr11	-	1829	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	22.4845626053867	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	2	True	NA	-4	True	ATTAAA	-18	NA	125903206	125893484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
transcript_19755.nnic	chr11	-	1405	4	NNC	ENSG00000110060.9	novel	1829	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	29.8477618740315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	NA	False	NA	-4	True	ATTAAA	-18	NA	125903228	125893484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_125894287_125895669_125895790_125895906_125896331_125903169
transcript_19758.nnic	chr11	-	1174	4	NNC	ENSG00000110060.9	novel	1829	4	NA	NA	-7	-230	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	29.8477618740315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTGCAAGTACTAGGA	NA	False	NA	NA	False	NA	NA	NA	125903228	125893715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_125894287_125895669_125895790_125895906_125896331_125903169
transcript_19759.known	chr11	+	1451	3	FSM	ENSG00000198331.11	ENST00000425380.7	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	6.5	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	-26	True	NA	14	True	ATTAAA	-17	NA	125887667	125900646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125887766_125891422_125891473_125899343
transcript_1976.known	chr1	-	5360	22	FSM	ENSG00000134644.16	ENST00000257075.9	5360	22	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	98.3179856580416	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	1	True	NA	-2	True	AATACA	-16	NA	31065698	30931505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_19760.known	chr11	-	1419	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	46	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTGTTGTGTTTTT	-13	True	NA	-5	True	ATTAAA	-17	NA	125903221	125893485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125894287_125895223_125895790_125903169
transcript_19764.known	chr11	-	605	3	FSM	ENSG00000110060.9	ENST00000534158.5	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATCCGTATATTGGC	-13	True	NA	NA	False	NA	NA	NA	125903221	125895660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_125895790_125895906_125896331_125903169
transcript_19767.known	chr11	+	1646	12	FSM	ENSG00000109832.14	ENST00000525943.1	1646	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	34.2877950962436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAAGATTATTTCTT	48	False	NA	-2	True	AATAAA	-2	NA	125903375	125923083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125903431_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_19768.known	chr11	+	7424	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	12.4322959854998	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGTCTATCTCAGTCT	14	True	NA	NA	False	AATAAA	-33	NA	125904507	125928843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_19771.known	chr11	-	1791	7	FSM	ENSG00000165526.9	ENST00000526942.5	1791	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.0323396106332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTTAGCTCCAGCT	26	False	NA	NA	False	NA	NA	NA	126211629	126202781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209490_126209723_126210889_126211056_126211449
transcript_19773.known	chr11	-	2468	7	FSM	ENSG00000165526.9	ENST00000298317.9	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	5.98377435700541	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGATGACTATATTTGT	5	True	NA	-26	True	AATAAA	-19	NA	126211650	126202095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211449
transcript_19778.nic	chr11	-	1993	7	NIC	ENSG00000165526.9	novel	2468	7	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	75.7847829932456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTGGAAGCGTATCT	279	False	NA	-10	True	ATTAAA	-13	NA	126211376	126202413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211332
transcript_1978.known	chr1	-	5385	22	FSM	ENSG00000134644.16	ENST00000426105.7	5385	22	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_5	96.1134769609067	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-18	True	NA	-2	True	AATACA	-16	NA	31065717	30931505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_19783.known	chr11	-	1030	3	FSM	ENSG00000165526.9	ENST00000532800.1	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGAGTGAG	25	False	NA	NA	False	NA	NA	NA	126211630	126209039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126209723_126210889_126211056_126211449
transcript_19784.known	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	1	101	junction_10	71.2001097000684	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	23	False	126268918	-28	True	AATAAA	-14	NA	126268895	126262937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
transcript_1979.known	chr1	-	5375	22	FSM	ENSG00000134644.16	ENST00000373747.7	5375	22	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_14	111.115086096698	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-5	True	NA	-2	True	AATACA	-16	NA	31065704	30931505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_19792.known	chr11	+	1951	11	FSM	ENSG00000110074.12	ENST00000263578.10	1951	11	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_6	35.2335067797686	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	3	True	NA	17	True	AATACA	-17	NA	126269153	126278126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_19795.known	chr11	+	1825	11	FSM	ENSG00000110074.12	ENST00000687699.1	1827	11	2	0	2	0	multi-exon	FALSE	canonical	2	11	junction_1	96.0606058694197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAATCCATCTGGAGGCC	58	False	NA	NA	False	NA	NA	NA	126269208	126277931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269416_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_198.nnic	chr1	+	1673	7	NNC	ENSG00000228794.11	novel	1823	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.7918413169269	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGGTACAATAGCTATT	750	False	NA	12	True	AATAAA	-14	NA	827585	854387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853479_853527
transcript_19801.known	chr11	+	1760	10	FSM	ENSG00000110074.12	ENST00000527004.5	1760	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	132.917778353647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTCGTCTGTTTA	39	True	NA	-40	True	NA	NA	NA	126269189	126278069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273338_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_19804.known	chr11	+	1427	10	FSM	ENSG00000110074.12	ENST00000525770.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	99.7441170640599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGCACAGGCAGTGAG	20	True	NA	NA	False	NA	NA	NA	126269170	126277840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126269292_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_19808.known	chr11	+	2016	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_7	65.9506207324844	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTTCTCTGGGCAG	-5	True	NA	-15	True	TATAAA	-1	NA	126211781	126262968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19812.nic	chr11	+	1986	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	-305	-53	combination_of_known_junctions	TRUE	canonical	3	160	junction_7	112.9491035821	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTAGATCTTTTACAG	NA	False	NA	23	True	TTTAAA	-19	NA	126211418	126262578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_19813.nic	chr11	+	1720	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_7	112.9491035821	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	NA	False	NA	-1	True	NA	NA	NA	126211737	126262631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_19814.nic	chr11	+	1981	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_7	112.9491035821	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAAGGCAATTTA	14	False	NA	5	True	TATAAA	-9	NA	126211766	126262921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_19831.nic	chr11	+	1572	8	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	1	-53	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	133.550265703172	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTAGATCTTTTACAG	14	False	NA	23	True	TTTAAA	-19	NA	126211766	126262578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19832.nic	chr11	+	1694	8	NIC	ENSG00000197798.9	novel	1616	8	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	133.550265703172	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	NA	False	NA	-1	True	NA	NA	NA	126211697	126262631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19833.nic	chr11	+	1910	8	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	133.550265703172	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAAGGCAATTTA	-15	True	NA	5	True	TATAAA	-9	NA	126211771	126262921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19835.known	chr11	+	1616	8	FSM	ENSG00000197798.9	ENST00000360194.8	1616	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	161.12791217425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	-14	True	NA	-1	True	NA	NA	NA	126211772	126262631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_19843.known	chr11	+	1862	8	FSM	ENSG00000197798.9	ENST00000627851.2	1862	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	167.672908013288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGCCTTCACCTTAT	NA	False	NA	1	True	TATAAA	-17	NA	126211723	126262984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_19846.known	chr11	+	5427	6	FSM	ENSG00000110063.10	ENST00000263579.5	5427	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	13.3356664625357	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTTGGTTTTTTTGC	-2	True	NA	14	True	AATAAA	-24	NA	126304059	126350005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126304282_126306569_126306745_126331404_126331551_126338285_126338400_126343306_126343418_126345346
transcript_19849.known	chr11	+	2189	5	FSM	ENSG00000150455.14	ENST00000392679.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.87228132326901	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAATCAG	11	True	NA	NA	False	NA	NA	NA	126283092	126294933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_126283154_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_19855.known	chr11	-	1572	2	FSM	ENSG00000280832.2	ENST00000629441.2	1579	2	0	7	0	-7	multi-exon	FALSE	canonical	3	55	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACACAGGTGATCCTTT	1119	False	NA	NA	False	AATAAA	-15	NA	126355579	126340888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126342323_126355441
transcript_19858.known	chr11	-	416	2	FSM	ENSG00000255062.2	ENST00000524964.2	423	2	5	2	3	-2	multi-exon	FALSE	canonical	3	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTTTGAAGTGAATCG	-7	True	NA	-1	True	AATAAA	-38	NA	126304318	126294297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_126294603_126304207
transcript_19859.known	chr11	-	5139	10	FSM	ENSG00000134954.14	ENST00000392668.8	5139	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	11.0732688918231	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTTTGGCTTGAT	0	True	NA	-7	True	ATTAAA	-22	NA	128587558	128458764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
transcript_19865.known	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	41.3306450738701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	62	False	NA	-3	True	AATAAA	-15	NA	128587542	128536411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
transcript_19867.nnic	chr11	-	793	2	NNC	ENSG00000134954.14	novel	5139	10	NA	NA	-16	-10876	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGCAAAATTCTTGAC	30	False	NA	NA	False	ATTAAA	-19	NA	128587574	128582683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_-_128583390_128587487
transcript_19872.nic	chr11	-	1146	10	ISM	ENSG00000170322.15	ENST00000682444.1	5173	27	-17	18952	-5	2156	5prime_fragment	FALSE	canonical	3	80	junction_4	30.6086407553307	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-31	True	NA	NA	False	AAAAAG	-13	NA	129895595	129882587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_19873.nic	chr11	-	1182	10	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-5	2156	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	37.3154719177507	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-31	True	NA	NA	False	AAAAAG	-13	NA	129895595	129882587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_19875.nic	chr11	-	1045	9	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	4	2156	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	44.3952418621636	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-10	True	NA	NA	False	AAAAAG	-13	NA	129895574	129882587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_19877.nic	chr11	-	1969	4	ISM	ENSG00000170325.16	ENST00000531431.1	528	5	-248	6211	-198	-6211	5prime_fragment	FALSE	canonical	3	27	junction_1	2.94392028877595	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATTAAATTAAAAT	487	False	NA	NA	False	NA	NA	NA	130003033	129954266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_129955572_129957745_129957911_129960895_129961083_130002721
transcript_19882.known	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_6	457.491546977161	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	-2	True	NA	21	True	AATAAA	-28	NA	130069893	130143806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_19883.known	chr11	+	3305	19	FSM	ENSG00000149418.11	ENST00000278742.6	3305	19	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	21.6278855207523	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTTTCTTTTCCTACT	-3	True	NA	27	True	AGTAAA	-19	NA	130159781	130210362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_130160061_130188113_130188274_130188529_130188658_130188868_130188940_130189738_130189897_130190112_130190149_130190453_130190695_130194148_130194289_130194639_130194738_130196338_130196449_130196569_130196701_130197840_130197946_130198307_130198419_130198507_130198622_130198946_130199070_130199950_130200138_130208409_130208685_130209441_130209579_130209661
transcript_19886.known	chr11	+	330	3	FSM	ENSG00000175773.14	ENST00000602310.2	348	3	11	7	11	-7	multi-exon	FALSE	canonical	2	2	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGAATCTGTCATTTTTA	4	True	NA	NA	False	AATATA	-18	NA	130315038	130315683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_130315116_130315327_130315448_130315550
transcript_19887.known	chr11	-	3628	9	FSM	ENSG00000134917.10	ENST00000257359.7	3628	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	13.4623317073975	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGGTCTGGTCTGATT	0	True	NA	-3	True	ACTAAA	-18	NA	130428609	130404922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_130406129_130408463_130408640_130408767_130408941_130411416_130411601_130414530_130414833_130416162_130416331_130416939_130417076_130419052_130419293_130427566
transcript_19889.known	chr11	-	1506	11	FSM	ENSG00000120451.11	ENST00000528555.5	1506	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	31.8654985838916	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTAGAGTTACTCGGC	20	True	NA	NA	False	NA	NA	NA	130916451	130878392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130907952_130908084_130910017_130910138_130910269_130910371_130911632_130911772_130916279
transcript_19890.nnic	chr11	+	731	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	0	-353	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTGTTATT	NA	False	NA	13	True	NA	NA	NA	131253359	131300770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_131253592_131291592_131291679_131300357
transcript_19891.nnic	chr11	+	1065	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	0	-19	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATGGATGCACACTAT	NA	False	NA	8	True	AGTAAA	-21	NA	131253359	131301104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_131253592_131291592_131291679_131300357
transcript_19894.nnic	chr11	+	426	3	Fusion	ENSG00000182667.15_ENSG00000231698.3	novel	755	2	NA	NA	-43	19863	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAGAAGAAGAAAA	-4	True	NA	NA	False	AAGAAA	-30	NA	131253402	131370780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr11_+_131253592_131350308_131350453_131370687
transcript_19897.known	chr11	+	584	2	FSM	ENSG00000231698.3	ENST00000416553.2	998	2	62	352	-24	-352	multi-exon	FALSE	canonical	3	175	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	15	False	NA	14	True	NA	NA	NA	131253421	131300771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_131253592_131300357
transcript_19901.known	chr11	+	2550	6	FSM	ENSG00000182667.15	ENST00000539799.5	2550	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	10.0915806492343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	NA	False	NA	8	True	ATTAAA	-22	NA	132146274	132336821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132335045
transcript_19903.known	chr11	+	2583	7	FSM	ENSG00000182667.15	ENST00000427481.6	2583	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	5.20949986936259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	NA	False	NA	8	True	ATTAAA	-22	NA	132146274	132336821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132330152_132330186_132335045
transcript_19909.known	chr11	-	7369	35	FSM	ENSG00000151503.14	ENST00000534548.7	7369	35	0	0	0	0	multi-exon	TRUE	canonical	1	80	junction_2	35.8806171229134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGGGTAAAATACTCT	-6	True	NA	NA	False	AGTAAA	-15	NA	134223967	134150112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134153053_134153139_134153201_134153288_134153364_134157017_134157096_134157927_134158068_134158328_134158496_134159891_134160075_134161780_134161892_134167995_134168196_134168468_134168603_134168916_134169055_134176306_134176387_134177218_134177458_134178633_134178742_134178821_134178937_134181076_134181185_134184636_134184753_134184902_134185001_134185334_134185527_134192688_134192910_134194015_134194151_134194664_134194739_134202815_134202906_134203141_134203199_134203653_134203907_134204045_134204172_134204898_134204972_134206598_134206733_134208863_134208952_134209144_134209207_134209312_134209478_134210269_134210455_134216935_134217099_134220571_134220727_134223862
transcript_19910.known	chr11	-	5539	35	FSM	ENSG00000151503.14	ENST00000534532.7	5561	35	22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.7155316077882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATAGGATTTTTCTGTT	7	True	NA	NA	False	AATAAA	-29	NA	134224532	134152433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134153053_134153139_134153201_134153288_134153364_134157017_134157096_134157927_134158068_134158328_134158496_134159891_134160075_134161780_134161892_134167995_134168196_134168468_134168529_134168916_134169055_134176306_134176387_134177218_134177458_134178633_134178742_134178821_134178937_134181076_134181185_134184636_134184753_134184902_134185001_134185334_134185527_134192688_134192910_134194015_134194151_134194664_134194739_134202815_134202906_134203141_134203199_134203653_134203907_134204045_134204172_134204898_134204972_134206598_134206733_134208863_134208952_134209144_134209207_134209312_134209478_134210269_134210455_134216935_134217099_134220571_134220727_134223862
transcript_19914.known	chr11	+	3765	9	FSM	ENSG00000166086.13	ENST00000299106.9	3765	9	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_8	17.6560011044404	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAACGCACATCATCA	2	True	NA	NA	False	NA	NA	NA	134069071	134152001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134069160_134139850_134139917_134140656_134140771_134144240_134144394_134144791_134144995_134145945_134146046_134148546_134148677_134148763_134148819_134149145
transcript_19917.nic	chr11	-	2291	8	ISM	ENSG00000151503.14	ENST00000687155.1	4954	31	2	48174	-2	228	5prime_fragment	FALSE	canonical	3	169	junction_6	20.3319392853225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCTTATTGGGTTAAA	-23	True	NA	NA	False	AAAAAG	-1	NA	134223984	134205381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_134206733_134208863_134208952_134209144_134209207_134209312_134209478_134210269_134210455_134216935_134217099_134220571_134220727_134223862
transcript_19918.known	chr11	+	3661	6	FSM	ENSG00000151502.11	ENST00000281187.10	3661	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	4.96386945839634	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTTCTGTGGTCTCTTC	2	True	NA	28	True	ATTAAA	-42	NA	134224670	134247788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134225346_134234896_134235054_134239990_134240156_134243118_134243295_134244937_134245081_134245443
transcript_19923.nic	chr11	-	644	2	ISM	ENSG00000151503.14	ENST00000687155.1	4954	31	19	62980	0	1238	5prime_fragment	FALSE	canonical	3	201	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAATATAAAGGCAAAA	-6	True	NA	NA	False	NA	NA	NA	134223967	134220187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_134220727_134223862
transcript_19924.known	chr11	-	1060	2	FSM	ENSG00000151503.14	ENST00000526422.2	1060	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCATTCTCTCCAGTTT	7	True	NA	NA	False	AATAAA	-30	NA	134224532	134223092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134223483_134223862
transcript_19929.known	chr11	-	893	8	FSM	ENSG00000151500.15	ENST00000392595.6	893	8	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_1	313.602504154933	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	1478	False	NA	-18	True	AATAAA	-18	NA	134253248	134248278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_19930.known	chr11	-	943	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_7	523.318804772551	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-29	True	NA	-18	True	AATAAA	-18	NA	134253370	134248278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_19935.known	chr11	-	1304	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_1	297.467458537718	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTTCTTCTAAAACCA	-11	True	NA	-21	True	AATAAA	-15	NA	134253352	134248281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_19937.known	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	539.303563249246	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-9	True	NA	21	True	AATAAA	-9	NA	134253350	134248287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_19938.nic	chr11	-	812	7	NIC	ENSG00000151500.15	novel	835	7	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	361	junction_6	686.118490738541	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-58	True	NA	21	True	AATAAA	-9	NA	134253399	134248287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_19940.nic	chr11	-	1186	6	ISM	ENSG00000151500.15	ENST00000352327.5	835	7	-41	0	-21	0	intron_retention	FALSE	canonical	3	417	junction_1	573.561644463784	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-50	True	NA	21	True	AATAAA	-9	NA	134253391	134248287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_19945.nic	chr11	+	1613	11	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	142	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	119.906797138444	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATCTTCTTGGTAG	NA	False	NA	8	True	AATAAA	-15	NA	134253513	134263100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134262769
transcript_19946.nic	chr11	+	2458	11	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	-116	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	119.906797138444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATAATTGATACCCTCC	NA	False	NA	4	True	ATTAAA	-20	NA	134253513	134263945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134262769
transcript_19947.known	chr11	+	2176	11	FSM	ENSG00000151498.12	ENST00000281182.9	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_10	38.4088531461172	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	6	True	NA	39	True	AATAAA	-28	NA	134253567	134265855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_19952.nic	chr11	+	2060	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	123.226079490774	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	NA	False	NA	39	True	AATAAA	-28	NA	134253513	134265855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_19956.known	chr11	+	1797	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	142.810420931144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	-1	True	NA	34	True	AATAAA	-23	NA	134253560	134265850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_19957.nic	chr11	+	928	7	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	24	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	151.416001649613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGGGTATTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	134253513	134260164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134260028
transcript_19958.nnic	chr11	+	3051	20	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	20.2595348777459	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	-19	True	NA	20	True	AGTAAA	-20	NA	134331977	134376324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375745_134375954
transcript_19959.known	chr11	+	3251	19	FSM	ENSG00000149328.15	ENST00000535456.7	3251	19	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_10	17.1276975887408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	-9	True	NA	20	True	AGTAAA	-20	NA	134331987	134376324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971
transcript_19960.known	chr11	+	864	3	FSM	ENSG00000255545.8	ENST00000657630.1	864	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGAGTGAAACGCGCA	3173	False	NA	NA	False	ATTAAA	-16	NA	134412283	134439007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr11_+_134412339_134436482_134436785_134438500
transcript_19964.nnic	chr12	-	1564	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	602	0	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_9	76.8362054576864	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	-3	True	NA	NA	False	AATAAA	-12	NA	31413	14521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_31374
transcript_19966.nnic	chr12	-	1573	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	602	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	94.643189577134	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	-3	True	NA	NA	False	AATAAA	-12	NA	31413	14521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17869_18036_18184_18372_18472_31374
transcript_19969.nnic	chr12	-	1974	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	598	0	intron_retention	FALSE	canonical	3	133	junction_1	58.8066511733343	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	-7	True	NA	NA	False	AATAAA	-12	NA	31417	14521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17860_18036_18184_18372_18485_26800_26955_31374
transcript_19970.nnic	chr12	-	1970	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	598	0	intron_retention	TRUE	non_canonical	0	0	junction_6	90.5003921961354	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	-7	True	NA	NA	False	AATAAA	-12	NA	31417	14521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17869_18036_18184_18372_18472_26800_26955_31374
transcript_19998.nic	chr12	-	3769	22	ISM	ENSG00000073614.13	ENST00000399788.7	10701	28	-250	29834	-250	0	5prime_fragment	FALSE	canonical	3	40	junction_14	10.7728557851996	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAGAAAAGG	-15	True	NA	NA	False	AGTAAA	-10	NA	389570	309890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
transcript_2.known	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00003_+_0_1000
transcript_20.known	ERCC-00058	+	1120	1	FSM	ERCC-00058A	DQ459418	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00058_+_0_1100
transcript_200.nnic	chr1	+	1229	6	NNC	ENSG00000228794.11	novel	3094	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.0199944475287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCACCTACTGTGAAGA	750	False	NA	NA	False	AATAAA	-17	NA	827585	854096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390_853479_853527
transcript_20002.known	chr12	+	2300	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	32.9882133833013	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-6	True	NA	15	True	AATAAA	-16	NA	401643	442642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_20004.known	chr12	+	2253	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	26.9084766514658	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-13	True	NA	15	True	AATAAA	-16	NA	401636	442642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_20006.nnic	chr12	+	2323	12	NIC	ENSG00000120647.10	novel	2300	13	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	46.7640463717358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	3663	False	NA	15	True	AATAAA	-16	NA	401566	442642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_401685_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_20008.known	chr12	+	1652	11	FSM	ENSG00000120647.10	ENST00000540180.5	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.2748311720313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTGACTAGAGT	-1	True	NA	NA	False	NA	NA	NA	389347	442004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_389487_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_20010.nnic	chr12	+	2192	11	NIC	ENSG00000120647.10	novel	2300	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	45.9914122418523	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-6	True	NA	15	True	AATAAA	-16	NA	401643	442642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_401685_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_20020.known	chr12	-	670	4	FSM	ENSG00000171840.13	ENST00000542920.1	670	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTCCCTACCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	643665	564580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_564682_565216_565402_565949_566179_643510
transcript_20025.known	chr12	-	3023	12	FSM	ENSG00000002016.18	ENST00000358495.8	3023	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	2.56808125305919	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTAATAATTTTTTTA	-2	True	NA	NA	False	AGTAAA	-38	NA	949694	911735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_913453_913893_914122_914430_914533_916343_916484_916638_916821_925449_925526_927144_927264_929818_929887_930050_930145_931219_931322_932974_933077_949601
transcript_20026.nic	chr12	-	2243	2	ISM	ENSG00000250132.6	ENST00000539259.1	501	3	69	10891	1	1982	5prime_fragment	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATAGGGCCGGGTGCAG	3	True	NA	NA	False	AAAAAG	-7	NA	991121	987869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_990042_991050
transcript_20027.nnic	chr12	+	1617	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-35	-2411	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	14.2427926635594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGAGTGCATCAATTGG	-14	True	NA	9	True	AATAAA	-13	NA	1691034	1786263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_20028.nnic	chr12	+	4028	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	14.2427926635594	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	-14	True	NA	NA	False	AATAAA	-16	NA	1691034	1788674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_20029.known	chr12	+	3971	8	FSM	ENSG00000006831.10	ENST00000357103.5	3971	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	19.0316599810067	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	21	True	NA	NA	False	AATAAA	-16	NA	1691069	1788674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_1691192_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_2003.known	chr1	-	4631	18	FSM	ENSG00000134644.16	ENST00000424085.6	4631	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	151.799061318906	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	4	True	NA	-2	True	AATACA	-16	NA	31065695	30931505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_31028795_31028865_31059203_31059578_31065615
transcript_20032.known	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	27.0774352552083	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-3	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_20033.known	chr12	-	2231	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTTGTATTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	2004535	1991455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_1993392_1997934_1997976_2004281
transcript_20036.nnic	chr12	-	699	3	NNC	ENSG00000256271.1	novel	609	2	NA	NA	-2318	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	2674538	2668499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_2669017_2672128_2672247_2674474
transcript_20037.nnic	chr12	-	991	3	Fusion	ENSG00000256271.1_ENSG00000246627.6	novel	609	2	NA	NA	-5	0	intron_retention	FALSE	canonical	2	8	junction_2	4	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	-6	True	NA	NA	False	ATTAAA	-20	NA	2691162	2668499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_2669017_2672128_2672247_2690806
transcript_20044.known	chr12	+	2320	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_11	14.9743582486422	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	-5	True	NA	18	True	AATAAA	-24	NA	2812667	2825076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_20061.known	chr12	+	3080	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	23.8067217398784	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	4	True	NA	12	True	AATAAA	-19	NA	2890890	2941138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
transcript_20064.known	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1212	junction_3	53.5864364633394	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	-30	True	NA	16	True	ATTAAA	-29	NA	2794969	2805423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
transcript_20069.known	chr12	+	1419	9	FSM	ENSG00000111203.13	ENST00000537851.5	1419	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	37.6264534602984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACAGAGACTTGTT	12	True	NA	NA	False	NA	NA	NA	2812684	2824502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2812857_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_20071.known	chr12	-	3370	8	FSM	ENSG00000111206.13	ENST00000361953.7	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	68.6062411631086	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCTCTGTGGTTTAT	26	True	NA	-8	True	AATAAA	-15	NA	2877040	2857682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_20073.known	chr12	+	587	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAATTGCTGCCCTCCT	88	False	NA	NA	False	AATAAA	-4	NA	2812760	2818458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
transcript_20076.known	chr12	+	1459	3	FSM	ENSG00000111203.13	ENST00000543029.1	1459	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAGAAAAGAA	8	True	NA	NA	False	NA	NA	NA	2812680	2818660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2812857_2817222_2817951_2818105
transcript_20077.known	chr12	+	1655	3	FSM	ENSG00000171792.11	ENST00000461997.5	1655	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	162.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGACATAGATGAGTTCT	-26	True	NA	-17	True	NA	NA	NA	2877198	2889271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2877283_2885282_2885493_2887910
transcript_20081.known	chr12	+	1926	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	19	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGGACCTACTGTGT	-2	True	NA	9	True	ATTAAA	-20	NA	2877222	2889524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2877283_2885282_2885535_2887910
transcript_20085.known	chr12	+	580	3	FSM	ENSG00000171792.11	ENST00000538700.2	580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	201.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGGGATCCCCTTAAT	-2	True	NA	NA	False	NA	NA	NA	2877222	2888057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2877283_2885161_2885535_2887910
transcript_20087.known	chr12	+	1605	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	-17	True	NA	-5	True	NA	NA	NA	2877207	2889440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2877283_2887910
transcript_2009.known	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_2	130.173768004707	699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-12	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
transcript_20091.known	chr12	-	442	2	FSM	ENSG00000258325.2	ENST00000547794.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTTGCAAGGATTCAG	101	False	NA	-14	True	ATTAAA	-18	NA	2812816	2805130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_2805318_2812561
transcript_20092.known	chr12	+	583	3	FSM	ENSG00000171792.11	ENST00000538636.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	199.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCCCAAAGCTGTGGGA	-26	True	NA	NA	False	NA	NA	NA	2877198	2888137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2877283_2885262_2885535_2887910
transcript_20093.known	chr12	+	1710	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	28.2999803690548	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGCTGTGTGAGC	-8	True	NA	23	True	AATAAA	-28	NA	2959396	3040676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_20094.nnic	chr12	+	1662	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	71.1938338865879	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	-2	True	NA	12	True	AATAAA	-17	NA	2959340	3040665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_20095.known	chr12	+	1637	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	75.1634032630418	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	15	False	NA	12	True	AATAAA	-17	NA	2959329	3040665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_20099.known	chr12	+	1396	11	FSM	ENSG00000197905.10	ENST00000397122.6	1396	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	82.4706614499969	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTGGTCTGGCTGTG	4	True	NA	18	True	AATAAA	-23	NA	2959916	3040671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_201.nnic	chr1	+	1520	6	NNC	ENSG00000228794.11	novel	1823	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.0199944475287	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGGTACAATAGCTATT	750	False	NA	12	True	AATAAA	-14	NA	827585	854387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390_853479_853527
transcript_20101.known	chr12	+	4322	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.67890834580027	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	-6	True	NA	21	True	AATAAA	-23	NA	3077378	3286559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_20102.known	chr12	+	4284	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	12.6700675706524	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTCTCTCAGTGGTGTG	NA	False	NA	26	True	AATAAA	-28	NA	3077354	3286564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_20104.known	chr12	-	255	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	31	False	NA	NA	False	NA	NA	NA	3211917	3211662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3211700_3211900
transcript_20107.known	chr12	+	2399	10	FSM	ENSG00000111218.12	ENST00000382622.4	2399	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.89215404065849	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGGATGGCTGGTTCC	-13	True	NA	NA	False	AATAAA	-17	NA	3491202	3593973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_3491701_3540605_3540792_3549935_3550092_3553650_3553715_3568705_3568849_3569476_3569565_3576870_3576987_3583057_3583209_3592230_3592353_3593098
transcript_20109.nic	chr12	-	1484	9	NIC	ENSG00000111224.14	novel	1197	9	NA	NA	18	156	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	25.611276813154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTTTTGTTGTTTTG	7918	False	NA	NA	False	TATAAA	-19	NA	3873418	3811966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3863835_3863958_3873211
transcript_20112.known	chr12	-	4449	8	FSM	ENSG00000111224.14	ENST00000228820.9	4449	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	26.2344220054337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-4	True	NA	-20	True	ATTAAA	-18	NA	3873399	3808860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
transcript_20113.known	chr12	-	4406	8	FSM	ENSG00000111224.14	ENST00000427057.6	4406	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	21.2526108840245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	5	True	NA	-20	True	ATTAAA	-18	NA	3873355	3808860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3863835_3863958_3873211
transcript_20115.known	chr12	-	4299	7	FSM	ENSG00000111224.14	ENST00000458162.6	4299	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8074060223274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-10	True	NA	-20	True	ATTAAA	-18	NA	3873370	3808860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3873211
transcript_20116.nic	chr12	+	682	2	ISM	ENSG00000256969.2	ENST00000669712.1	903	4	5993	0	-2082	0	3prime_fragment	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	7005	False	NA	19	True	AATAAA	-19	NA	4018894	4026658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_4019140_4026221
transcript_20117.known	chr12	+	542	2	FSM	ENSG00000256969.2	ENST00000543206.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	2041	False	NA	19	True	AATAAA	-19	NA	4020976	4026658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4021082_4026221
transcript_20118.known	chr12	+	6493	5	FSM	ENSG00000118971.9	ENST00000261254.8	6493	5	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_3	26.3106442338457	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGGCCGTTTTTGACT	1	True	NA	21	True	AATAAA	-17	NA	4273761	4305353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_20120.nnic	chr12	+	969	5	NNC	ENSG00000118971.9	novel	572	2	NA	NA	-357	2245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	366.831279336973	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGCATAAGGGAATCCC	376	False	NA	26	True	AATAAA	-23	NA	4275191	4300213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_4275282_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_20121.nic	chr12	+	1017	4	ISM	ENSG00000118971.9	ENST00000675880.1	6532	6	35	19874	35	0	5prime_fragment	FALSE	canonical	2	5	junction_3	399.754369026225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATCTGTGTTTCTCC	-3	True	NA	NA	False	NA	NA	NA	4273796	4285476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_4274236_4276004_4276221_4278759_4278920_4285274
transcript_20123.known	chr12	+	1062	4	FSM	ENSG00000118971.9	ENST00000536537.2	1062	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	402.111372079373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGCTTCATTAGTCTTG	1	True	NA	NA	False	ACTAAA	-18	NA	4273761	4297968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4297756
transcript_20124.known	chr12	+	8209	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	9.86711710683521	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	-22	True	NA	NA	False	ATTAAA	-19	NA	4321212	4360028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
transcript_20127.known	chr12	-	2168	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	13.5964666485614	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-31	True	NA	NA	False	ATTAAA	-14	NA	4538508	4489414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
transcript_20138.known	chr12	+	2235	11	FSM	ENSG00000111247.15	ENST00000442992.6	2235	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	181.299310533714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGATTAAAGTGAGC	14	True	NA	2	True	NA	NA	NA	4538889	4560018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4545218_4545313_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_20140.known	chr12	+	2163	10	FSM	ENSG00000111247.15	ENST00000228843.13	2163	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	157.558768185394	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	14	True	NA	31	True	ATTAAA	-16	NA	4538889	4560047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_20145.known	chr12	+	2112	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_7	58.3501017565522	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	14	True	NA	31	True	ATTAAA	-16	NA	4538889	4560047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_20152.known	chr12	+	787	8	FSM	ENSG00000111247.15	ENST00000544927.5	787	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	141.902380932406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGCCACTAGCACC	54	False	NA	NA	False	NA	NA	NA	4538929	4558970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553090_4558856
transcript_20154.nic	chr12	+	2018	8	NIC	ENSG00000111247.15	novel	2112	9	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	143.231936924354	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	-42	True	NA	31	True	ATTAAA	-16	NA	4538833	4560047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4558856
transcript_20156.nic	chr12	+	2029	8	NIC	ENSG00000111247.15	novel	2112	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	143.609589811107	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	-13	True	NA	31	True	ATTAAA	-16	NA	4538862	4560047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4538957_4541883_4541934_4543762_4543905_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_20158.nic	chr12	+	789	7	ISM	ENSG00000111247.15	ENST00000544927.5	787	8	-96	5861	-35	70	5prime_fragment	FALSE	canonical	3	345	junction_3	48.1386885294285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAAGAAATCTAAAT	-42	True	NA	NA	False	ATTAAA	-36	NA	4538833	4553109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982
transcript_20167.nnic	chr12	+	1966	15	NIC	ENSG00000255639.3	novel	3317	15	NA	NA	-14	76928	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	408.969043536829	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGTGCATTATGCCAT	NA	False	NA	6	True	AATAAA	-18	NA	4649086	4851112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4850737
transcript_20168.nic	chr12	+	1830	9	ISM	ENSG00000139180.11	ENST00000266544.10	8356	11	-27	11123	-8	887	5prime_fragment	FALSE	canonical	3	796	junction_5	40.6471093683179	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAAACCTAC	NA	False	NA	NA	False	NA	NA	NA	4649086	4683194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204
transcript_20169.nic	chr12	+	995	5	ISM	ENSG00000010219.14	ENST00000010132.6	1840	12	14516	0	-61	0	3prime_fragment	FALSE	canonical	3	17	junction_2	13.1624465810882	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATGACTCCTCTTATG	NA	False	NA	40	True	CATAAA	-35	NA	4604835	4613888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_4605087_4607326_4607388_4610154_4610285_4612542_4612719_4613511
transcript_20170.known	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	14.8996644257513	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	-32	True	NA	25	True	CATAAA	-20	NA	4604896	4613873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
transcript_20175.known	chr12	+	1341	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTCAGAGTTGTGTA	-3	True	NA	NA	False	AGTAAA	-14	NA	5432107	5495299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_5432343_5494193
transcript_20176.known	chr12	-	3683	25	FSM	ENSG00000047617.17	ENST00000682330.1	3683	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	5.12195031213697	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATCTGTTGTCTTTGG	-1	True	NA	NA	False	AATAAA	-25	NA	5945259	5562654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_5563569_5565557_5565664_5575833_5576016_5577954_5578008_5578365_5578519_5599483_5599630_5612655_5612757_5612900_5612959_5615185_5615298_5635151_5635348_5647726_5647802_5732519_5732631_5739316_5739400_5744156_5744318_5750835_5750971_5799506_5799572_5806051_5806094_5807312_5807369_5827768_5827821_5830434_5830490_5832451_5832604_5854042_5854142_5921039_5921367_5922619_5922805_5945195
transcript_20177.known	chr12	-	8830	52	FSM	ENSG00000110799.14	ENST00000261405.10	8830	52	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_43	102.706780761069	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGGTGCACTGTGTC	-1	True	NA	-4	True	AATAAA	-24	NA	6124670	5948876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_5949204_5949785_5949884_5951843_5951884_5952390_5952520_5953495_5953595_5967485_5967603_5968126_5968168_5969210_5969392_5971598_5971710_5976110_5976261_5981785_5981992_5983149_5983255_5985044_5985120_5985562_5985666_5991818_5992019_5993861_5994204_5994414_5994608_5996001_5996223_6011616_6011795_6012086_6012131_6013480_6013646_6016088_6016233_6016515_6016657_6016753_6016871_6018364_6019744_6021899_6022036_6022739_6022899_6023630_6023788_6025579_6025694_6025905_6026047_6029341_6029489_6031443_6031579_6034687_6034827_6036387_6036492_6044290_6044452_6046722_6046818_6052542_6052784_6056856_6057073_6057848_6058045_6062953_6063055_6064245_6064385_6065136_6065274_6071296_6071344_6072330_6072443_6073618_6073742_6075334_6075552_6095459_6095585_6110373_6110583_6110865_6110969_6121173_6121339_6123141_6123197_6124420
transcript_20178.nic	chr12	-	1381	6	ISM	ENSG00000110799.14	ENST00000261405.10	8830	52	99	146010	94	396	5prime_fragment	FALSE	canonical	3	70	junction_1	11.160645142643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGCTGGGCATG	-5	True	NA	NA	False	NA	NA	NA	6124571	6094886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_6095585_6110373_6110583_6110865_6110969_6121173_6121339_6123141_6123197_6124420
transcript_20180.known	chr12	+	1432	9	FSM	ENSG00000010278.15	ENST00000538834.6	1432	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	472.620024438237	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGACTGGTTTTTGTTT	38	False	NA	13	True	AATAAA	-15	NA	6199874	6238259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200073_6200383_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20181.known	chr12	+	1182	9	FSM	ENSG00000010278.15	ENST00000382519.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	602.513433460201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATATTGTACATAAAAGA	4	True	NA	103	True	AATGAA	-28	NA	6200384	6238139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6232936_6233006_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20182.known	chr12	+	1272	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	498.691839737135	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	4	True	NA	1	True	AATAAA	-3	NA	6199840	6238247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20183.known	chr12	+	1225	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	109.438082391602	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTTGTTTTGTTTAA	19	True	NA	20	True	AATAAA	-22	NA	6200399	6238266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20186.known	chr12	+	1195	8	FSM	ENSG00000010278.15	ENST00000382515.7	1195	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	506.286681714651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATTTGATACATAATAAA	416	False	NA	-21	True	NA	NA	NA	6200796	6238225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_20187.known	chr12	+	2963	16	FSM	ENSG00000008323.16	ENST00000396988.7	2963	16	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_1	27.200163398202	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGTGTGGTGGTGTGC	207	False	NA	12	True	AATATA	-39	NA	6310932	6328505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6311095_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
transcript_20188.known	chr12	-	1339	6	FSM	ENSG00000067182.8	ENST00000366159.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	55.0795787928702	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGGCTTGGGGGTTA	4087	False	NA	NA	False	NA	NA	NA	6341848	6331239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6331994_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_20191.known	chr12	+	1781	7	FSM	ENSG00000139192.12	ENST00000266556.8	1781	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.74535599249993	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTTGTTATTACT	-44	True	NA	27	True	AATACA	-37	NA	6452041	6462316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6452313_6453066_6453298_6453446_6453717_6457405_6457745_6458644_6458948_6460854_6460939_6462033
transcript_20193.nnic	chr12	-	1141	6	Fusion	ENSG00000139190.17_ENSG00000215039.8	novel	3139	4	NA	NA	-2	0	multi-exon	FALSE	canonical	1	2	junction_2	16.1418710191849	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-4	True	NA	NA	False	ATTAAA	-28	NA	6470679	6447615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_6448151_6448639_6448758_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20194.known	chr12	-	1068	5	FSM	ENSG00000139190.17	ENST00000400911.7	1068	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	17.606816861659	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	285	False	NA	NA	False	ATTAAA	-1	NA	6470653	6462236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6462843_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20195.known	chr12	-	747	5	FSM	ENSG00000139190.17	ENST00000535180.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17.606816861659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTCCCAGCCCTATC	0	True	NA	NA	False	NA	NA	NA	6470645	6462676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6462970_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20196.known	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	8.05536398239638	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-2	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
transcript_20200.known	chr12	-	700	3	FSM	ENSG00000215039.8	ENST00000504270.2	700	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	13	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	42	True	NA	NA	False	ATTAAA	-28	NA	6451515	6447615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6448151_6448639_6448758_6451468
transcript_20201.known	chr12	+	4825	32	FSM	ENSG00000010292.13	ENST00000315579.10	4825	32	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_6	68.1889094158698	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTTTCCTAAGCTTG	-11	True	NA	31	True	AATAAA	-19	NA	6494101	6531955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920_6531077_6531326
transcript_20203.known	chr12	-	898	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	2135	junction_2	129.5	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTACTACTCTCATAA	-5	True	NA	-6	True	AATATA	-20	NA	6493262	6491885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493057
transcript_20204.known	chr12	-	343	3	FSM	ENSG00000111639.8	ENST00000540949.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1181.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCGATAGAAGAGAAAGC	527	False	NA	-102	True	AATAAA	-42	NA	6493295	6492280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493250
transcript_20205.known	chr12	-	814	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1095.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCACATACTTTTGTT	-18	True	NA	-28	True	AATAAA	-21	NA	6493840	6492146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493458
transcript_20207.known	chr12	-	472	3	FSM	ENSG00000111639.8	ENST00000543959.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1155.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGATAGCCACATACTT	104	False	NA	27	True	AATAAA	-16	NA	6493718	6492151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493673
transcript_20208.known	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1197	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-19	True	NA	16	True	NA	NA	NA	6493841	6492102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6492468_6492861_6492973_6493716
transcript_20211.known	chr12	+	1348	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	8060.79010938134	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	15	False	NA	19	True	AATAAA	-7	NA	6534533	6538359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20214.known	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_1	8372.99439281078	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	11	True	NA	-25	True	NA	NA	NA	6535301	6538315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20219.known	chr12	+	1285	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	0	0	0	0	multi-exon	FALSE	canonical	3	20749	junction_1	1451.7009635252	43887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	-2	True	NA	31	True	AATAAA	-19	NA	6534516	6538371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20220.known	chr12	+	1266	9	FSM	ENSG00000111640.15	ENST00000396856.5	1266	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8119.71931088138	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCAATAAAGTACCCT	13	False	NA	0	True	NA	NA	NA	6534531	6538340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536818_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20221.known	chr12	+	1256	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	3	23617	junction_4	739.137086509033	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATCAATAAAGTACCC	200	False	NA	-1	True	NA	NA	NA	6534753	6538339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_20222.known	chr12	-	1776	5	FSM	ENSG00000010295.20	ENST00000396830.2	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	12.5797456254091	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTATAGGAGGCTGTGTT	2	True	NA	-79	True	NA	NA	NA	6549113	6539606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667
transcript_20224.known	chr12	-	2701	16	FSM	ENSG00000111641.12	ENST00000399466.6	2701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	119.507991364595	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	6	True	NA	-4	True	AATACA	-17	NA	6568286	6556870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_20225.known	chr12	-	3038	16	FSM	ENSG00000111641.12	ENST00000541778.5	3038	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	104.945615545492	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	8725	False	NA	-4	True	AATACA	-17	NA	6568691	6556870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20226.nic	chr12	-	2757	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	2	0	combination_of_known_junctions	FALSE	non_canonical	3	103	junction_15	74.9603154268236	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	9086	False	NA	-4	True	AATACA	-17	NA	6568330	6556870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_20227.known	chr12	-	2650	16	FSM	ENSG00000111641.12	ENST00000322166.10	2650	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	98.0475168250352	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	1	True	NA	-4	True	AATACA	-17	NA	6568291	6556870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20237.nic	chr12	-	1273	8	ISM	ENSG00000111642.16	ENST00000644801.1	5326	34	-72	21670	-1	0	5prime_fragment	FALSE	canonical	3	161	junction_5	53.0590737397709	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTCTCTTCTGTAT	6127	False	NA	NA	False	AAAAAG	-10	NA	6607453	6600534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
transcript_20238.known	chr12	-	1267	8	FSM	ENSG00000111642.16	ENST00000545942.6	1267	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	108.753981864705	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTCTCTTCTGTAT	6871	False	NA	NA	False	AAAAAG	-10	NA	6606709	6600534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6606582
transcript_20239.nic	chr12	-	1294	8	ISM	ENSG00000111642.16	ENST00000645005.1	6175	40	-56	30113	-1	0	5prime_fragment	FALSE	canonical	3	87	junction_5	72.8083870477145	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTCTCTTCTGTAT	6127	False	NA	NA	False	AAAAAG	-10	NA	6607453	6600534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6607299
transcript_20241.known	chr12	-	1002	6	FSM	ENSG00000111641.12	ENST00000542015.1	1002	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	141.064524243341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCCTGAAACCTAAGGA	11	True	NA	NA	False	NA	NA	NA	6568281	6557220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560744_6567815_6567923_6568206
transcript_20243.nic	chr12	-	1971	5	ISM	ENSG00000111641.12	ENST00000620535.4	2791	17	-5	7869	-5	-831	5prime_fragment	FALSE	canonical	3	264	junction_1	57.447258420224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACAAAATGGGCCAGGCAC	9079	False	NA	NA	False	AGTAAA	-14	NA	6568337	6564738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_20244.known	chr12	-	668	4	FSM	ENSG00000111641.12	ENST00000540228.1	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	141.916250733389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCCCAGCACCTGGCAGT	-5	True	NA	NA	False	NA	NA	NA	6568297	6566261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568138
transcript_20245.known	chr12	-	630	4	FSM	ENSG00000111641.12	ENST00000545915.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	24.8596057893121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCAGCACCTGGCAGTGA	-33	True	NA	NA	False	NA	NA	NA	6568325	6566259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568206
transcript_2025.known	chr1	+	1705	9	FSM	ENSG00000121766.16	ENST00000546109.5	1705	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	250.72145899384	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_20251.known	chr12	-	508	2	FSM	ENSG00000111641.12	ENST00000546053.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCAAGAGGAAGTAGTG	1	True	NA	NA	False	NA	NA	NA	6568291	6567499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6567923_6568206
transcript_20252.known	chr12	-	1150	9	FSM	ENSG00000111653.20	ENST00000488381.5	1150	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	65.4932009830028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGCACAGTGCTGTCA	12	False	6663141	NA	False	NA	NA	NA	6663129	6651095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6653229_6653397_6655637_6655914_6656726_6656799_6663064
transcript_20253.nic	chr12	-	1289	8	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	53.8209427411953	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	NA	False	NA	-12	True	AATAAA	-15	NA	6663148	6650590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6651235_6651323_6651386_6652270_6652310_6652661_6652768_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20254.nic	chr12	-	1292	8	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	53.9629502529282	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	NA	False	NA	-12	True	AATAAA	-15	NA	6663148	6650590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6651235_6651323_6651386_6652270_6652310_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20256.known	chr12	-	1348	8	FSM	ENSG00000111653.20	ENST00000446105.6	1348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.2445398539391	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTGGGTAGGTAAATAA	-1	True	NA	-47	True	NA	NA	NA	6663142	6650625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20259.known	chr12	-	741	8	FSM	ENSG00000111653.20	ENST00000412586.6	741	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.2445398539391	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	40	False	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20261.nic	chr12	-	1122	7	NIC	ENSG00000111653.20	novel	776	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	64.7096077358945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	NA	False	NA	-12	True	AATAAA	-15	NA	6663148	6650590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6651235_6651323_6651386_6652270_6652310_6652661_6652768_6652935_6653051_6656726_6656799_6663064
transcript_20265.known	chr12	-	776	7	FSM	ENSG00000111653.20	ENST00000469749.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	53.2760108616752	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGCAGCCACTAACGGTA	2	True	NA	NA	False	NA	NA	NA	6663114	6651011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6656726_6656799_6663064
transcript_20267.known	chr12	-	678	7	FSM	ENSG00000111653.20	ENST00000444704.5	678	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	59.0197706987526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	40	False	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6663064
transcript_20268.known	chr12	-	1280	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	53.4334996878259	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	-1	True	NA	40	True	AGTAAA	-15	NA	6663142	6650538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
transcript_20271.nic	chr12	-	1250	7	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	61.8288408071472	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	NA	False	NA	-12	True	AATAAA	-15	NA	6663148	6650590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6651235_6651323_6651386_6652661_6652768_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20272.known	chr12	-	602	7	FSM	ENSG00000111653.20	ENST00000423703.6	602	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	61.9542842209748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	40	False	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6651235_6651323_6651386_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_20276.known	chr12	-	401	2	FSM	ENSG00000111653.20	ENST00000493267.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGAGGCCTAGGCGGGC	12	True	NA	NA	False	NA	NA	NA	6663104	6656437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6656799_6663064
transcript_20278.known	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	87.1417810238005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-26	True	NA	61	True	NA	NA	NA	6689510	6666647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_20290.known	chr12	-	3266	10	FSM	ENSG00000126746.18	ENST00000319770.7	3266	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	73.8102338248833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-26	True	NA	-2	True	AATAAA	-15	NA	6689510	6666476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_20291.nic	chr12	-	2773	10	NIC	ENSG00000126746.18	novel	3008	11	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_9	66.0807586719967	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-7	True	NA	-29	True	TATAAA	-18	NA	6689548	6666737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_20296.nic	chr12	-	2725	9	NIC	ENSG00000126746.18	novel	2514	9	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	92.4471977671579	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-7	True	NA	-29	True	TATAAA	-18	NA	6689548	6666737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_20299.known	chr12	-	2432	6	FSM	ENSG00000139200.14	ENST00000540656.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	36.9724221548981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	415	False	NA	-7	True	AATAAA	-14	NA	6700430	6693791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
transcript_20300.known	chr12	-	2323	6	FSM	ENSG00000139200.14	ENST00000320591.9	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	25.9121593079388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	11	True	NA	-7	True	AATAAA	-14	NA	6700800	6693791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_20301.known	chr12	-	2711	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	10.0591997693654	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	-4	True	NA	-6	True	AATAAA	-15	NA	6700815	6693790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_20304.known	chr12	+	1831	8	FSM	ENSG00000111652.10	ENST00000543155.6	1831	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	58.7426070033585	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	13	True	NA	31	True	AATAAA	-24	NA	6724045	6731865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20305.known	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	120.55754828703	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	38	False	NA	11	True	ATTAAA	-18	NA	6724070	6731807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20306.known	chr12	+	1832	8	FSM	ENSG00000111652.10	ENST00000539735.5	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	124.354168340565	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGCAGAAATAAATCTATG	2	True	NA	-6	True	ATTAAA	-39	NA	6724078	6731828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724251_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20309.known	chr12	+	1707	8	FSM	ENSG00000111652.10	ENST00000534877.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	136.107850393633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGAGAAATCTATCTAC	9	True	NA	8	True	AATAAA	-1	NA	6724297	6731842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724331_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20312.nic	chr12	+	2016	7	ISM	ENSG00000111652.10	ENST00000543155.6	1831	8	-14	8	-7	-8	intron_retention	FALSE	canonical	3	263	junction_1	62.8421744443084	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACAAACTACCCTGAACT	-1	True	NA	23	True	AATAAA	-16	NA	6724031	6731857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668
transcript_20313.known	chr12	+	898	7	FSM	ENSG00000111652.10	ENST00000538375.5	898	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	141.209950074349	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCAGAGAGCCTTCT	9	True	NA	NA	False	NA	NA	NA	6724134	6731097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724180_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20315.known	chr12	+	1768	7	FSM	ENSG00000111652.10	ENST00000626119.2	1768	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	171.535629599865	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTATCTTCTGTGTT	-19	True	NA	39	True	AATAAA	-32	NA	6724013	6731873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724153_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20324.known	chr12	+	1728	7	FSM	ENSG00000111652.10	ENST00000543939.5	1728	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	185.419119833959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGACGCAGAAATAAATC	-7	True	NA	-10	True	ATTAAA	-35	NA	6724118	6731824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724267_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_20325.known	chr12	+	2034	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	21.7842960766593	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	-2	True	NA	41	True	AATAAA	-34	NA	6724286	6731875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_2033.known	chr1	+	1568	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	57.2224445761041	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	14	True	NA	32	True	ACTAAA	-23	NA	31297031	31364936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_20333.known	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2988	junction_5	292.728970209646	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-1	True	NA	-19	True	AATAAA	-18	NA	6753141	6747995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
transcript_20346.known	chr12	+	820	5	FSM	ENSG00000159335.18	ENST00000540667.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	849.853038766115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCCCCACAGCTGCCC	15	False	NA	-27	True	NA	NA	NA	6765515	6770875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6765639_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_20347.known	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_2	184.005944197463	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	1	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_20348.known	chr12	-	570	2	FSM	ENSG00000089693.11	ENST00000536249.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAGTTGGGGAAAGGGT	504	False	NA	NA	False	NA	NA	NA	6752967	6751821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6752363_6752938
transcript_20349.nnic	chr12	+	1685	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4481	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	1	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	59	False	NA	5	True	AATAAA	-17	NA	6818534	6820799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_6818651_6818846_6818915_6819298
transcript_20350.known	chr12	+	3049	10	FSM	ENSG00000010610.10	ENST00000011653.9	3049	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.44029735234809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	-13	True	NA	5	True	AATAAA	-17	NA	6789527	6820799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6789663_6800071_6800188_6800306_6800472_6814141_6814301_6814758_6814993_6816055_6816404_6817129_6817331_6818420_6818543_6818846_6818915_6819298
transcript_20351.nnic	chr12	+	2146	15	NNC	ENSG00000110811.20	novel	2129	14	NA	NA	-821	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.0664199575618	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGCCAGTCAAGTGT	2996	False	NA	19	True	AATAAA	-19	NA	6827585	6839847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_6827633_6829858_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_20352.known	chr12	+	2129	14	FSM	ENSG00000110811.20	ENST00000612048.4	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	17.1457379940598	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGGGCCAGTCAAGTG	1194	False	NA	18	True	AATAAA	-18	NA	6829827	6839846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_20353.known	chr12	+	1610	5	FSM	ENSG00000250510.8	ENST00000428545.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.0623058987491	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	48	False	NA	11	True	ATTAAA	-23	NA	6821703	6827421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6821901_6823467_6823764_6825483_6825674_6826195_6826354_6826652
transcript_20356.nic	chr12	+	2480	5	NIC	ENSG00000250510.8	novel	2495	5	NA	NA	-36	0	intron_retention	FALSE	canonical	1	2	junction_2	15.0748134316813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	129	False	NA	11	True	ATTAAA	-23	NA	6821784	6827421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_6821901_6823467_6824715_6825483_6825674_6826195_6826354_6826652
transcript_20357.known	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.06828373317832	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	-10	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
transcript_20359.nic	chr12	-	1160	6	NIC	ENSG00000111665.12	novel	1144	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	115.820550853465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	591	False	NA	-14	True	ATTAAA	-34	NA	6851318	6848827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_6849199_6849322_6849414_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_20360.known	chr12	-	1047	6	FSM	ENSG00000111665.12	ENST00000229265.10	1047	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	116.083762861134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	19	True	NA	-2	True	AAAAAG	-16	NA	6851252	6848815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849322_6849430_6849564_6849784_6850466_6850597_6850832_6851010_6851221
transcript_20361.known	chr12	-	1144	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	15.8189759466282	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	-15	True	NA	-14	True	ATTAAA	-34	NA	6851286	6848827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_20366.known	chr12	-	985	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	122.289615258206	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAAGGTATATGT	22	True	NA	-29	True	ATTAAA	-19	NA	6851249	6848842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_20368.nic	chr12	-	1422	4	ISM	ENSG00000111665.12	ENST00000422785.7	2760	5	-49	4048	-26	2	5prime_fragment	FALSE	canonical	3	301	junction_3	15.6914697279198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAGGTATATGTAA	591	False	NA	-27	True	ATTAAA	-21	NA	6851318	6848840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_6849859_6850466_6850597_6850832_6851010_6851221
transcript_20371.known	chr12	-	1327	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	16.2230545829076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	13	True	NA	-15	True	ATTAAA	-33	NA	6851258	6848828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
transcript_20372.known	chr12	+	3083	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_1	55.5018404526265	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	0	True	NA	4	True	AATAAA	-4	NA	6852147	6866620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_20373.known	chr12	+	3162	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	170.796066696198	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	2	True	NA	16	True	AATAAA	-16	NA	6852149	6866632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_2038.known	chr1	+	1730	8	FSM	ENSG00000121766.16	ENST00000373714.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	209.442408430049	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	-10	True	NA	32	True	ACTAAA	-23	NA	31297007	31364936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297214_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_20380.known	chr12	+	2294	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_1	51.9702712222006	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTAAGGAGTCT	-7	True	NA	26	True	ATTAAA	-16	NA	6914579	6923697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
transcript_20389.known	chr12	+	1615	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	3.60272006083385	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	4498	False	NA	5	True	AATAAA	-15	NA	6904732	6914229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_20393.known	chr12	+	1587	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	3990.89998204248	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAACATCTCTTACTAT	-11	True	NA	17	True	TATAAA	-45	NA	6868113	6870939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_20395.known	chr12	+	791	7	FSM	ENSG00000111669.15	ENST00000488464.6	791	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4057.87951261356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCATCTTCCCTAC	-25	True	NA	NA	False	NA	NA	NA	6868099	6870383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6868256_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_20398.known	chr12	+	1412	7	FSM	ENSG00000010626.15	ENST00000451681.5	1412	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.8151743807532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTCGGATTTCCAATAA	4556	False	NA	-30	True	NA	NA	NA	6904790	6914194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_20405.known	chr12	+	969	5	FSM	ENSG00000010626.15	ENST00000428946.5	969	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	5.02493781056044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	-8	True	NA	5	True	AATAAA	-15	NA	6904833	6914229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6913890
transcript_20406.known	chr12	+	845	4	FSM	ENSG00000240370.6	ENST00000421824.1	845	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCACTACCCGCCGGCT	-1	True	NA	NA	False	NA	NA	NA	6873655	6884741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6873782_6882195_6882328_6883703_6883920_6884370
transcript_2041.known	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	236.603512700514	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
transcript_20414.known	chr12	+	1438	3	FSM	ENSG00000240370.6	ENST00000412023.5	1438	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTAGGCTCGAGCCGCTG	713	False	NA	NA	False	NA	NA	NA	6873388	6884616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6873782_6882195_6882328_6883703
transcript_20415.known	chr12	+	587	3	FSM	ENSG00000240370.6	ENST00000451612.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAAATGCCCATCGGC	3	True	NA	NA	False	NA	NA	NA	6873478	6884438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6873782_6883703_6883920_6884370
transcript_20417.known	chr12	-	1203	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	42	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-7	True	NA	-4	True	AGTAAA	-27	NA	6873303	6870934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6871320_6872237_6872998_6873245
transcript_20421.known	chr12	+	1105	1	FSM	ENSG00000248593.3	ENST00000602547.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGTCTTGTCATCT	NA	False	NA	20	True	AATAAA	-31	NA	6884681	6885786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6884700_6885800
transcript_20422.known	chr12	+	461	1	FSM	ENSG00000275703.1	ENST00000610699.1	461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCAGAAGTTTCCCTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	6899751	6900212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6899800_6900200
transcript_20423.known	chr12	-	1205	3	FSM	ENSG00000111671.10	ENST00000523102.5	1205	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	11	True	NA	-4	True	AGTAAA	-27	NA	6873285	6870934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6871320_6872237_6872987_6873214
transcript_20424.known	chr12	+	474	2	FSM	ENSG00000010626.15	ENST00000472633.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	7381	False	NA	4	True	AATAAA	-14	NA	6913101	6914228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6913238_6913890
transcript_20425.nic	chr12	+	2019	5	ISM	ENSG00000111676.15	ENST00000396684.3	4702	10	9687	0	-52	0	3prime_fragment	FALSE	canonical	3	97	junction_1	16.3477827242718	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	815	False	NA	37	True	AAAACA	-21	NA	6937645	6942321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_20427.known	chr12	+	662	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	544.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	17	False	NA	23	True	AATAAA	-16	NA	6943833	6946002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6944174_6944475_6944566_6945770
transcript_20428.known	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_2	126	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	0	True	NA	23	True	AATAAA	-16	NA	6944021	6946002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6944174_6944475_6944653_6945770
transcript_20429.known	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	497	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	9	False	NA	17	True	AATAAA	-10	NA	6944121	6945996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6944174_6944379_6944653_6945770
transcript_20431.known	chr12	-	1097	1	FSM	ENSG00000272173.1	ENST00000607421.1	1097	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCGCAGTTTCCTAAAG	9043	False	NA	-3	True	AGTAAA	-18	NA	6944604	6943507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6943500_6944600
transcript_20433.known	chr12	+	2159	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	36.2580872204932	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	5	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_20435.nnic	chr12	+	1844	14	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	0	0	intron_retention	TRUE	canonical	3	9	junction_1	43.8219906428876	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	2	True	NA	10	True	AATAAA	-18	NA	6946573	6961316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_6946740_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_20436.known	chr12	+	350	2	FSM	ENSG00000257084.1	ENST00000537269.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACCTGTCTTTTGTCTA	28	False	NA	28	True	AATAAA	-42	NA	6963245	6964447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6963349_6964200
transcript_2044.known	chr1	+	1534	7	FSM	ENSG00000121766.16	ENST00000616393.4	1534	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	236.031600991619	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_20440.known	chr12	-	1379	10	FSM	ENSG00000215021.10	ENST00000535923.6	1379	10	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	527.980662758508	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	0	True	NA	4	True	NA	NA	NA	6970664	6965326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20442.known	chr12	-	1354	9	FSM	ENSG00000215021.10	ENST00000440277.6	1354	9	0	0	0	0	multi-exon	FALSE	canonical	1	85	junction_4	645.079052810584	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	8783	False	NA	4	True	NA	NA	NA	6970753	6965326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20443.known	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	552.997513556797	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8820	False	NA	-21	True	AATAAA	-21	NA	6970716	6965351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20446.known	chr12	-	1735	9	FSM	ENSG00000215021.10	ENST00000677354.1	1735	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	554.93489201437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	4	True	NA	-21	True	AATAAA	-21	NA	6970618	6965351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20451.known	chr12	-	1391	8	FSM	ENSG00000215021.10	ENST00000676496.1	1391	8	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_3	644.923630979605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8812	False	NA	-21	True	AATAAA	-21	NA	6970724	6965351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6966423_6966501_6967170_6967336_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_20457.known	chr12	-	858	4	FSM	ENSG00000215021.10	ENST00000546111.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	698.399280895646	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8785	False	NA	-21	True	AATAAA	-21	NA	6970751	6965351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6966423_6966501_6970195_6970281_6970416
transcript_20458.known	chr12	-	874	4	FSM	ENSG00000215021.10	ENST00000537646.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	566.241605284843	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	3089	False	NA	4	True	NA	NA	NA	6967575	6965326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170
transcript_20459.known	chr12	-	2235	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_8	44.4762733250987	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	22	True	NA	-8	True	GATAAA	-27	NA	7018476	6976184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_20461.known	chr12	+	2682	12	FSM	ENSG00000182326.16	ENST00000360817.10	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.85923019793528	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	3	True	NA	7	True	AATAAA	-18	NA	7060717	7071032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7060878_7061838_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_20462.known	chr12	+	2972	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	5.31487853899762	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	NA	False	NA	7	True	AATAAA	-18	NA	7060514	7071032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_20474.known	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	50.8385680364819	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	-3	True	NA	14	True	AATAAA	-16	NA	6970912	6979936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
transcript_20477.known	chr12	+	616	5	FSM	ENSG00000126749.16	ENST00000539196.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	235.086154420034	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGTTTTGGGGTTCC	121	False	NA	NA	False	NA	NA	NA	6971060	6975977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975695
transcript_20479.known	chr12	+	1223	4	FSM	ENSG00000126749.16	ENST00000611981.1	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_3	61.8079462708657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGATTTGATATTCAACAG	-3	True	NA	NA	False	NA	NA	NA	6970912	6975573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_6971092_6974338_6974441_6974551_6975149_6975228
transcript_20480.known	chr12	-	2488	11	FSM	ENSG00000159403.18	ENST00000647956.2	2488	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	7.33757453113766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTGCAAAATGAGTCAAAA	4	True	NA	-12	True	AATAAA	-19	NA	7092445	7080218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7091451_7091681_7092386
transcript_20482.known	chr12	-	1881	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	7.35014907046277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGCTGGACACCCA	8432	False	NA	NA	False	AAAACA	-1	NA	7090792	7080740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
transcript_20485.known	chr12	-	3335	6	FSM	ENSG00000139178.12	ENST00000266542.9	3335	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.62138772902208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTGTATGTCTAGA	13	True	NA	-5	True	AATATA	-13	NA	7109214	7094553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7097164_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
transcript_20492.known	chr12	-	957	4	FSM	ENSG00000139194.8	ENST00000266560.8	957	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1.69967317119759	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-1	True	NA	-15	True	TTTAAA	-16	NA	7128889	7123685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7124175_7124628_7124731_7128239_7128419_7128702
transcript_20493.known	chr12	-	354	2	FSM	ENSG00000139178.12	ENST00000539927.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTAGGGGCAGTCG	99	False	NA	NA	False	NA	NA	NA	7109128	7108144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7108480_7109109
transcript_20495.nnic	chr12	+	3573	19	NNC	ENSG00000139182.15	novel	4013	18	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_18	29.3356480568195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	-7	True	NA	NA	False	AATAAA	-22	NA	7130391	7158945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940_7158090_7158508
transcript_20496.known	chr12	+	4013	18	FSM	ENSG00000139182.15	ENST00000266546.11	4013	18	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_6	11.122159059523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	-28	True	NA	NA	False	AATAAA	-22	NA	7130370	7158945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940
transcript_20498.known	chr12	-	735	3	FSM	ENSG00000256967.1	ENST00000538062.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTCAGGCTGTCTGTT	3566	False	NA	NA	False	AATAAA	-23	NA	7131198	7129507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7130018_7130322_7130374_7131024
transcript_205.known	chr1	+	5441	3	FSM	ENSG00000228794.11	ENST00000669922.1	5441	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGCCACTATATATT	767	False	NA	NA	False	NA	NA	NA	827602	846365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_827776_829002_829105_841199
transcript_20500.known	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	22.4881203206394	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	-13	True	NA	24	True	AATAAA	-25	NA	7189685	7211459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20502.known	chr12	+	2253	16	FSM	ENSG00000139197.11	ENST00000434354.6	2253	16	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_2	28.3365488371467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAATTCAAGGGCTGT	-12	True	NA	NA	False	NA	NA	NA	7189686	7210431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20504.known	chr12	+	3252	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	19.2072477816823	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	-17	True	NA	48	True	AATAAA	-21	NA	7189583	7211483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20506.nic	chr12	+	3453	15	NIC	ENSG00000139197.11	novel	2477	16	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	20.6991323884035	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	90	False	NA	24	True	AATAAA	-25	NA	7189824	7211459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20508.known	chr12	+	3170	15	FSM	ENSG00000139197.11	ENST00000266564.7	3170	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	27.2415498974696	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGCTGGTCATGAA	422	False	NA	45	True	AATAAA	-18	NA	7190360	7211480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203455_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_20511.nnic	chr12	+	2293	14	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	-63	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	15.2156101717745	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACATTGAATCTGTATT	NA	False	NA	-61	True	AATAAA	-22	NA	7299577	7328656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025_7318183_7320724_7320805_7322417_7322542_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
transcript_20512.nnic	chr12	+	2385	14	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4518	5	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	15.2156101717745	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTCAAGACAATTTC	NA	False	NA	7	True	AATAAA	-15	NA	7299553	7328724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025_7318183_7320724_7320805_7322417_7322542_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
transcript_20516.nnic	chr12	+	2157	12	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	21.4279496171096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTCAAGACAATTTC	NA	False	NA	7	True	AATAAA	-15	NA	7299577	7328724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025_7318183_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
transcript_20518.nnic	chr12	+	1603	6	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4574	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_3	14.9184449591772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATAATAGCTGAT	NA	False	NA	-24	True	NA	NA	NA	7299497	7318517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025
transcript_20521.nnic	chr12	+	1002	5	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4469	-5258	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	33.2819395468473	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTTCAAATTGAAAT	NA	False	NA	NA	False	GATAAA	-15	NA	7299602	7313259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7313119
transcript_20527.nnic	chr12	+	2879	2	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4574	-11654	intron_retention	FALSE	canonical	3	101	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGTTAAGGCAATCAT	NA	False	NA	NA	False	ATTAAA	-35	NA	7299497	7306863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7299796_7304282
transcript_20528.known	chr12	+	710	3	FSM	ENSG00000215009.6	ENST00000533292.1	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATAATAGCTGAT	NA	False	NA	-24	True	NA	NA	NA	7310672	7318517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7310747_7317136_7317281_7318025
transcript_20529.known	chr12	-	1236	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTGTTTATAATTT	0	True	NA	15	True	AATAAA	-42	NA	7695775	7689783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7690705_7695460
transcript_20530.known	chr12	+	1100	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	-1	True	NA	NA	False	AATAAA	-27	NA	7711432	7717559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
transcript_20531.known	chr12	+	836	6	FSM	ENSG00000111704.11	ENST00000541267.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	213.917367223889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAGTCCTGGAGC	NA	False	NA	NA	False	NA	NA	NA	7787793	7794808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7787844_7788418_7788579_7789619_7789766_7792949_7793213_7794456_7794544_7794678
transcript_20536.nnic	chr12	+	2208	5	NNC	ENSG00000111704.11	novel	5182	4	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	193.844493086598	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	823	False	NA	28	True	AATAAA	-19	NA	7789339	7799146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678_7795307_7798342
transcript_20540.nnic	chr12	+	1549	4	NNC	ENSG00000111704.11	novel	5182	4	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	225.802765458904	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	0	True	NA	28	True	AATAAA	-19	NA	7789429	7799146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_7789766_7792949_7793161_7796883_7797082_7798342
transcript_20541.known	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	62.8295754844449	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	-4	True	NA	28	True	AATAAA	-19	NA	7789401	7799146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
transcript_20543.known	chr12	+	870	4	FSM	ENSG00000111704.11	ENST00000526286.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	206.515536138729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGTGAAACTGATATT	185	False	NA	NA	False	NA	NA	NA	7789614	7795095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794726
transcript_20550.known	chr12	-	3827	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	215.098943641189	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	-2	True	NA	-24	True	AATAAA	-19	NA	7936187	7919229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_20555.known	chr12	-	4414	9	FSM	ENSG00000059804.16	ENST00000486749.5	4414	9	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	207.254938119698	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGGGCTTATTTACT	156	False	NA	-25	True	AATAAA	-18	NA	7936167	7919230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_2056.known	chr1	-	693	5	FSM	ENSG00000121769.8	ENST00000498148.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	166.025600435595	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTAACT	2	True	NA	-15	True	NA	NA	NA	31373073	31365720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31365940_31367392_31367495_31369069_31369137_31369384_31369558_31372941
transcript_20566.known	chr12	-	1784	5	FSM	ENSG00000059804.16	ENST00000495813.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	3428	junction_2	120.819079619073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGAGACTGTGTCT	154	False	NA	NA	False	NA	NA	NA	7936169	7929503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_20570.known	chr12	-	763	3	FSM	ENSG00000059804.16	ENST00000476634.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	3609	junction_1	73	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTATTATTTTACCCA	-2	True	NA	NA	False	TATAAA	-1	NA	7936187	7932645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_7933148_7933809_7933903_7936019
transcript_20574.known	chr12	+	2634	8	FSM	ENSG00000089818.18	ENST00000339754.11	2634	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_5	21.138995786393	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCTTTTAAGAAGTTGA	-3	True	NA	135	True	AATAAA	-30	NA	8082273	8097881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_20576.known	chr12	+	2578	7	FSM	ENSG00000089818.18	ENST00000639071.1	2578	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	17.5949803447839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAATGGTAATTAAAAA	-3	True	NA	-8	True	TATAAA	-18	NA	8082273	8097738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8093056_8095600_8095704_8096041
transcript_20577.known	chr12	+	2446	7	FSM	ENSG00000089818.18	ENST00000450991.6	2446	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	75.5792446523662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTTATCTTTTAAT	-9	True	NA	23	True	ATTAAA	-14	NA	8082267	8097769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_20578.known	chr12	+	3418	6	FSM	ENSG00000089818.18	ENST00000537796.2	3418	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	19.0094713235271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAAAGTGTCTCTTTT	3	True	NA	13	True	ATTAAA	-4	NA	8082279	8097759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8093056_8095600_8095704_8096041
transcript_20579.known	chr12	+	5166	6	FSM	ENSG00000089818.18	ENST00000640648.1	5166	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	20.6358910638722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATGGTAATTAAAAATA	NA	False	NA	-6	True	TATAAA	-20	NA	8081894	8097740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8092785_8092871_8093056_8095600_8095704_8096041
transcript_2058.known	chr1	-	1097	4	FSM	ENSG00000121769.8	ENST00000373713.7	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	3.55902608401044	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAAATGACCACTG	-1	True	NA	NA	False	NA	NA	NA	31373076	31365252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31365940_31367392_31367495_31369384_31369558_31372941
transcript_20580.known	chr12	+	1036	2	FSM	ENSG00000089818.18	ENST00000546181.2	1036	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAACACTTTTTGCCCG	NA	False	NA	NA	False	NA	NA	NA	8082227	8090815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935
transcript_20581.known	chr12	+	2517	8	FSM	ENSG00000089818.18	ENST00000638237.1	2517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.0607916890009	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTTTTATCTTTTAA	-11	True	NA	22	True	ATTAAA	-13	NA	8082265	8097768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093044_8095600_8095704_8096041
transcript_20582.nnic	chr12	-	815	5	NNC	ENSG00000164845.16	novel	829	7	NA	NA	-11	242	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	14.2653426176871	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGGCTCCAAAAATAGCA	NA	False	NA	NA	False	CATAAA	-14	NA	8242959	8232269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_8232608_8234275_8234426_8235600_8235735_8238666_8238750_8242849
transcript_20588.nic	chr12	-	912	4	NIC	ENSG00000226091.7	novel	2157	7	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	9.39266853573691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-5	True	NA	NA	False	AATAAA	-19	NA	8396719	8384116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_8384422_8390269_8390512_8390901_8390970_8396422
transcript_20589.known	chr12	-	456	2	FSM	ENSG00000226091.7	ENST00000536539.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	6294	False	NA	NA	False	AATAAA	-19	NA	8390420	8384116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8384422_8390269
transcript_20592.known	chr12	+	620	2	FSM	ENSG00000256552.2	ENST00000537764.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATTTCTTTTTCTTCT	35	False	NA	94	True	NA	NA	NA	8320380	8369555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8320427_8368981
transcript_20598.known	chr12	+	1589	9	FSM	ENSG00000166532.16	ENST00000544257.5	1589	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	320.465067324038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	36	False	NA	26	True	AATAAA	-26	NA	8681690	8783095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_20599.nic	chr12	+	1812	9	NIC	ENSG00000166532.16	novel	1519	8	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	296.76545347294	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	-32	True	NA	26	True	AATAAA	-26	NA	8697946	8783095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_206.known	chr1	-	1317	1	FSM	ENSG00000225880.5	ENST00000473798.1	1317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAAGCTCACCTTTTA	-7	True	NA	-12	True	AATAAA	-14	NA	827522	826205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_826200_827500
transcript_2060.known	chr1	+	1900	10	FSM	ENSG00000168528.12	ENST00000373709.8	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	23.5738922340315	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGCCCCTCACCCT	-7	True	NA	28	True	AATAAA	-20	NA	31413212	31434678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_31413305_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_20601.known	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	20.2227594556233	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	12	True	NA	10	True	AATATA	-21	NA	8697990	8777191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_20604.known	chr12	+	650	3	FSM	ENSG00000166532.16	ENST00000510357.2	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	493.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	2568	False	NA	26	True	AATAAA	-26	NA	8779811	8783095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8780113_8780574_8780740_8782911
transcript_20605.known	chr12	+	1893	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	1787	False	NA	26	True	AATAAA	-26	NA	8779030	8783095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8780740_8782911
transcript_20609.known	chr12	+	5390	15	FSM	ENSG00000111752.11	ENST00000544916.6	5390	15	0	0	0	0	multi-exon	FALSE	canonical	3	2180	junction_5	423.199113652094	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	20	True	NA	22	True	ATTAAA	-21	NA	8914508	8941467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_20623.known	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_2	38.903370319578	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	6	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_20624.known	chr12	+	618	6	FSM	ENSG00000111752.11	ENST00000538657.5	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	1134.51850579883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAACTCATCCTGATGC	14	False	NA	NA	False	NA	NA	NA	8913895	8922691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8913951_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632
transcript_20628.known	chr12	-	2305	5	FSM	ENSG00000003056.8	ENST00000536844.5	2305	5	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_1	317.96658629485	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGGCCTTGTCATTTGT	213	False	NA	NA	False	ATTAAA	-14	NA	8949761	8940363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8941941_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_20633.known	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	34	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-4	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_8945585_8946228_8946406_8949487
transcript_20634.nnic	chr12	+	537	2	Antisense	novelGene_ENSG00000256904.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	985	junction_1	0	268	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGCGTGA	9456	False	NA	25	True	AATAAA	-14	NA	8805134	8821087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_+_8805430_8820845
transcript_2064.known	chr1	-	1614	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	0	0	0	multi-exon	TRUE	canonical	3	241	junction_4	23.0366555732381	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGTTTTCCACCATG	2	True	NA	-20	True	AATAAA	-17	NA	31644876	31629865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
transcript_20640.known	chr12	+	592	5	FSM	ENSG00000139187.10	ENST00000539240.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.65660395791398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCGGTGCCATCAAC	-31	True	NA	NA	False	NA	NA	NA	8950043	9009448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8950237_8992205_8992311_8995118_8995289_9008974_9009076_9009425
transcript_20644.nnic	chr12	+	1330	5	NIC	ENSG00000139187.10	novel	427	4	NA	NA	-159	0	intron_retention	FALSE	canonical	1	1	junction_1	13.2382022948737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTAGCTATTTGGGAA	264	False	NA	NA	False	AATAAA	-28	NA	8949884	9010063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_8950237_8990211_8990346_8992205_8992311_9008974_9009076_9009425
transcript_20647.known	chr12	+	427	4	FSM	ENSG00000139187.10	ENST00000544226.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.07106781186548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGAAGGTCAGACTTTG	32	True	NA	NA	False	NA	NA	NA	8950106	9009516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8950237_8992205_8992311_9008974_9009076_9009425
transcript_20654.known	chr12	+	851	3	FSM	ENSG00000139187.10	ENST00000538029.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTAGCTATTTGGGAA	50	False	NA	NA	False	AATAAA	-28	NA	8950124	9010063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_8950237_9008974_9009076_9009425
transcript_2066.known	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	131.362940825113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	277	False	NA	NA	False	NA	NA	NA	31644896	31630448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
transcript_20662.nnic	chr12	+	668	5	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-117	126	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	12.871965661856	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTGATGTTAAGATG	2628	False	NA	3	True	AATAAA	-14	NA	9647929	9657213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656567_9656650_9656920
transcript_20665.known	chr12	+	587	5	FSM	ENSG00000256594.9	ENST00000574035.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.6903632845132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATCTACATGAACAGAAAA	16	True	NA	NA	False	NA	NA	NA	9648166	9656982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_9648329_9653682_9653809_9655872_9655980_9656567_9656698_9656920
transcript_20668.known	chr12	+	2612	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.9283882771841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	2745	False	NA	NA	False	GATAAA	-16	NA	9648046	9658412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
transcript_20673.known	chr12	-	2685	6	FSM	ENSG00000150048.10	ENST00000315330.8	2685	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATAATGTGAACTGCA	3	True	NA	NA	False	AATAAA	-16	NA	10098985	10069553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10071514_10073292_10073412_10075503_10075656_10081236_10081414_10089123_10089223_10098807
transcript_20676.known	chr12	+	792	6	FSM	ENSG00000139112.11	ENST00000535576.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	199.560116255729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGGAAGCCCAGCAGA	12	False	NA	NA	False	NA	NA	NA	10213439	10221852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10213715_10213835_10213975_10214073_10214188_10218062_10218142_10220439_10220559_10221786
transcript_20677.known	chr12	+	531	5	FSM	ENSG00000139112.11	ENST00000544284.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	182.636763823717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGAAGGTGAAGACATC	0	True	NA	NA	False	NA	NA	NA	10212853	10221950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10212945_10213141_10213220_10218062_10218142_10220439_10220559_10221786
transcript_2068.nnic	chr1	+	1470	3	NNC	ENSG00000235790.7	novel	829	4	NA	NA	-1517	-13915	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	4	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACTGTTATCCAGTCTAG	NA	False	NA	9	True	AATAAA	-18	NA	31642531	31645831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_31642624_31644038_31644297_31644711
transcript_20681.known	chr12	+	1883	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	12.8322510366134	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGAGTTCAGCAATGT	-31	True	NA	20	True	AATAAA	-21	NA	10212876	10223128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
transcript_20682.known	chr12	+	2294	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	186.719635341927	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	1	True	NA	15	True	AATAAA	-16	NA	10213428	10223123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
transcript_20683.known	chr12	+	379	2	FSM	ENSG00000139112.11	ENST00000629504.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATCACCTGGTACCT	-25	True	NA	NA	False	GGGGCT	-32	NA	10212882	10213877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_10213220_10213835
transcript_20684.nic	chr12	-	806	2	ISM	ENSG00000256288.1	ENST00000539009.1	649	3	1578	0	1578	0	3prime_fragment	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	NA	False	NA	-15	True	AATAAA	-20	NA	10336714	10332860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_10333064_10336111
transcript_2069.nnic	chr1	+	1424	3	NNC	ENSG00000235790.7	novel	829	4	NA	NA	-1466	-13915	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACTGTTATCCAGTCTAG	NA	False	NA	9	True	AATAAA	-18	NA	31642582	31645831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_31642629_31644038_31644297_31644711
transcript_20690.known	chr12	-	1057	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	443.520732322628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	6	True	NA	-10	True	AATAAA	-16	NA	10613594	10606012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
transcript_20691.known	chr12	-	705	6	FSM	ENSG00000111196.10	ENST00000540074.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	460.660221855545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGTATATTTAATTA	9	True	NA	4	True	ATTAAA	-25	NA	10613591	10606259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613540
transcript_20692.known	chr12	-	868	6	FSM	ENSG00000111196.10	ENST00000545236.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	449.71172988927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCAGGCTGTTTGTA	-9	True	NA	-6	True	ATTAAA	-15	NA	10613609	10606269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10612639_10612979_10613438
transcript_20701.known	chr12	-	2606	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	52.9404146187013	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTTTCCAAGTACT	-9	True	NA	NA	False	AATAAA	-18	NA	10613609	10604192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
transcript_20705.known	chr12	-	559	3	FSM	ENSG00000111196.10	ENST00000544176.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_2	64.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCCAGCCAACGTTAGG	0	True	NA	NA	False	NA	NA	NA	10613600	10609603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10609942_10610621_10610681_10613438
transcript_20706.known	chr12	-	666	5	FSM	ENSG00000111196.10	ENST00000539554.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	418.270247567288	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	9	True	NA	-10	True	AATAAA	-16	NA	10613591	10606012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613540
transcript_20707.nnic	chr12	-	1106	8	NNC	ENSG00000231887.8	novel	507	5	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	35.7308533000686	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTGGTGGTGTCTCT	-12	True	NA	-4	True	AATAAA	-16	NA	11171622	10880964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_10881057_10882216_10882489_10882551_10882699_10883060_10883097_10884153_10884276_10973654_10973722_11047019_11047189_11171421
transcript_20711.nic	chr12	-	808	3	ISM	ENSG00000231887.8	ENST00000541977.5	507	5	-78	90697	-14	0	5prime_fragment	FALSE	canonical	3	48	junction_1	30.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATTAAAAAGAAAAAAAT	-12	True	NA	NA	False	NA	NA	NA	11171622	10973283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_10973722_11047019_11047189_11171421
transcript_20718.nic	chr12	-	914	6	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	29.8020133548054	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171638	10845848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_20719.nnic	chr12	-	1621	4	NIC	ENSG00000212127.6	novel	1662	5	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	43.0529389885935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTTTGCTGTTTAT	NA	False	NA	-2	True	AATAAA	-18	NA	11171638	10937409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_10938578_10973654_10973722_11047019_11047189_11171421
transcript_2072.known	chr1	-	5176	28	FSM	ENSG00000121753.13	ENST00000398542.5	5176	28	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_11	19.6927009101292	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTGAGCTGTTTG	14	True	NA	-11	True	AATAAA	-15	NA	31764340	31727116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_31727606_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31755998_31756816_31763883
transcript_20721.known	chr12	-	994	3	FSM	ENSG00000111215.12	ENST00000539285.2	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAGTATACCAATAAAAT	498	False	NA	-33	True	NA	NA	NA	10848975	10845883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10845951_10847044_10847368_10848371
transcript_20722.known	chr12	-	1662	5	FSM	ENSG00000212127.6	ENST00000381852.4	1662	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	43.1451040096092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTGCTGTTTATTA	-1	True	NA	0	True	AATAAA	-20	NA	11171573	10937407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_10938578_10973654_10973722_11034781_11034886_11047019_11047189_11171421
transcript_20723.known	chr12	+	4823	1	FSM	ENSG00000256537.5	ENST00000622602.2	4823	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTATGGTATTTTTT	-19	True	NA	8	True	AATAAA	-20	NA	11171193	11176016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_11171200_11176000
transcript_20733.nnic	chr12	+	1719	6	NNC	ENSG00000121380.12	novel	1247	7	NA	NA	-10344	-311	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.41660919471891	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTTTCTAGTACTATT	NA	False	NA	4	True	GATAAA	-18	NA	12060590	12099373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_12060934_12079298_12079739_12087212_12087387_12090778_12090850_12094663_12094931_12098949
transcript_20735.known	chr12	+	1897	6	FSM	ENSG00000121380.12	ENST00000308721.9	1897	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.89736659610103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	-3	True	NA	NA	False	AATAAA	-25	NA	12070938	12099695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12071138_12079298_12079739_12087212_12087387_12090778_12090850_12094663_12094931_12098949
transcript_20737.known	chr12	-	2220	5	FSM	ENSG00000111261.14	ENST00000396349.3	2220	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	19.4550764583437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGTTCTCATAAGTAG	11	True	NA	-14	True	AATAAA	-14	NA	12350241	12329264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12330959_12338419_12338561_12343091_12343174_12343275_12343415_12350077
transcript_20738.known	chr12	-	5532	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	4.54606056566195	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGAGTATTCTATGATTTA	10	True	NA	NA	False	AATAAA	-25	NA	12350242	12326055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
transcript_20739.known	chr12	-	1540	2	FSM	ENSG00000205791.4	ENST00000381800.4	1543	2	0	3	0	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGTCTGTCGCATCAAC	NA	False	NA	-2	True	AATAAA	-17	NA	12357067	12355405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12356806_12356927
transcript_20740.known	chr12	+	580	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	40.9416929574514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGCCTGGGGCTGGG	-4	True	NA	NA	False	NA	NA	NA	12357078	12465783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
transcript_20742.known	chr12	+	6422	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	16.1314048434171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCCAGGACAATGCTG	-5	True	NA	NA	False	AATAAA	-27	NA	12357077	12471233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
transcript_20743.known	chr12	+	3770	4	FSM	ENSG00000111269.3	ENST00000228865.3	3770	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	3.68178700572909	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTTTGACTATTGT	-3	True	NA	17	True	ATTAAA	-18	NA	12611875	12645108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12612188_12635776_12635975_12637569_12637715_12641993
transcript_20750.known	chr12	-	553	4	FSM	ENSG00000183150.8	ENST00000540796.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	62.9444199274249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCCGGGGAAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	12696207	12662270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12662471_12684350_12684508_12695458_12695512_12696064
transcript_20751.known	chr12	+	2411	3	FSM	ENSG00000111276.12	ENST00000228872.9	2411	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	4.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGAGTCAAATTGTAA	-8	True	NA	14	True	AATAAA	-18	NA	12717367	12722369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12718315_12718824_12718955_12721035
transcript_20753.known	chr12	+	4335	2	FSM	ENSG00000111276.12	ENST00000614874.2	4335	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGGTAGAATAGGTT	-8	True	NA	NA	False	AATATA	-38	NA	12717367	12722212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12718315_12718824
transcript_20755.known	chr12	-	1751	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTGATTAATGATTCA	7	True	NA	NA	False	CATAAA	-17	NA	12684521	12660890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12662471_12684350
transcript_20756.known	chr12	+	2375	15	FSM	ENSG00000178878.13	ENST00000534843.1	2375	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	323.936761591216	584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTCTAACTCCTTAA	12	True	NA	23	True	AATAAA	-17	NA	12725928	12829975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12726097_12726296_12726374_12812260_12812441_12813206_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12823869_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_20757.known	chr12	+	1698	11	FSM	ENSG00000213782.7	ENST00000352940.8	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	216.22083618375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	5110	False	NA	27	True	AATAAA	-21	NA	12813315	12829979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_20758.known	chr12	+	2357	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_6	52.3030591839521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	1	True	NA	27	True	AATAAA	-21	NA	12813353	12829979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_20760.known	chr12	+	759	1	FSM	ENSG00000241352.3	ENST00000475592.2	759	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCGTGAGACGTTATCA	NA	False	NA	NA	False	NA	NA	NA	12850981	12851740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12851000_12851700
transcript_20761.known	chr12	+	838	4	FSM	ENSG00000247498.11	ENST00000660059.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.0489491367259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTATGACAACCTTC	6	True	NA	98	True	AATACA	-24	NA	12927726	12980562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12927804_12966758_12966858_12979523_12979623_12979999
transcript_20763.known	chr12	-	1159	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	6.84754619472471	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCATAAGTGTAATT	-14	True	NA	-8	True	AATAAA	-23	NA	13000265	12974869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
transcript_20764.known	chr12	+	740	3	FSM	ENSG00000247498.11	ENST00000543515.8	758	3	18	0	3	0	multi-exon	FALSE	canonical	3	27	junction_1	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGACAACCTTCTGTC	9	True	NA	102	True	AATACA	-28	NA	12927729	12980566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12927804_12979523_12979623_12979999
transcript_20766.known	chr12	+	674	3	FSM	ENSG00000247498.11	ENST00000542078.2	674	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGATGCAGACCACTTTA	13	True	NA	-84	True	TTTAAA	-30	NA	12927733	12984081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_12927804_12979523_12979623_12983576
transcript_20771.nnic	chr12	+	2540	2	NIC	ENSG00000255621.1	novel	2403	5	NA	NA	-21	-16178	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTTCTTTGATTTTAT	-22	True	NA	2	True	AATAAA	-20	NA	13000429	13024501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_13000482_13022013
transcript_20772.known	chr12	+	4711	13	FSM	ENSG00000084444.14	ENST00000197268.13	4711	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_10	5.87130498460285	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	-9	True	NA	14	True	AATAAA	-18	NA	13044380	13083449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624
transcript_20773.nnic	chr12	+	2112	12	NIC	ENSG00000084444.14	novel	2623	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	18.7435939469886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	-9	True	NA	14	True	AATAAA	-18	NA	13044380	13083449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13083002
transcript_20776.nnic	chr12	-	681	3	NNC	ENSG00000111305.19	novel	1422	7	NA	NA	7711	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGTCTCTTGAGCATGG	7867	False	NA	-8	True	NA	NA	NA	13087937	13084824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_13085244_13087151_13087264_13087787
transcript_20777.nic	chr12	-	1086	3	ISM	ENSG00000111305.19	ENST00000396302.7	1628	6	7345	248	7187	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGTCTCTTGAGCATGG	7343	False	NA	-8	True	NA	NA	NA	13088461	13084824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_13085244_13087151_13087264_13087906
transcript_20780.known	chr12	+	8774	15	FSM	ENSG00000171681.13	ENST00000536444.5	8774	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	74.0828273361813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGTACTCTGATTAA	50	False	NA	36	True	AATAAA	-18	NA	14365728	14502931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
transcript_20781.known	chr12	+	4887	13	FSM	ENSG00000171681.13	ENST00000543189.5	4887	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	75.9850131422126	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACTGACTCAAATGTT	14	True	NA	5	True	ATTAAA	-19	NA	14365692	14482653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
transcript_20782.known	chr12	+	3563	11	FSM	ENSG00000171681.13	ENST00000537653.5	3563	11	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_2	30.0359784258812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATAGAATCAAATCTT	-2	True	NA	NA	False	NA	NA	NA	14365676	14476432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889
transcript_20784.nic	chr12	+	1398	2	ISM	ENSG00000171681.13	ENST00000545723.1	577	4	-61	13142	-49	-356	5prime_fragment	FALSE	canonical	3	356	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGATGAAACTTCTG	0	True	NA	NA	False	NA	NA	NA	14365626	14425105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_14365828_14423908
transcript_20790.nnic	chr12	-	943	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	35	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	14710342	14705460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_14705913_14708056_14708216_14710010
transcript_20792.nnic	chr12	-	1009	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	92	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	14710279	14705460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_14705913_14708056_14708345_14710010
transcript_20794.nnic	chr12	-	2135	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	246	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGTCATCCCTACT	NA	False	NA	NA	False	NA	NA	NA	14710279	14706478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_14708345_14710010
transcript_20796.known	chr12	+	644	1	FSM	ENSG00000246705.5	ENST00000544848.3	620	1	-22	-2	-22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAGAGAGCTGTGTAG	-6	True	NA	27	True	AATAAA	-17	NA	14774382	14775026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14774400_14775000
transcript_20798.known	chr12	-	4581	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_3	103.796845443236	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAAGGGTTATTTATA	8	True	NA	-1	True	ATTAAA	-18	NA	14803478	14784581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_208.known	chr1	-	2757	19	FSM	ENSG00000188976.11	ENST00000327044.7	2757	19	0	0	0	0	multi-exon	TRUE	canonical	3	992	junction_1	193.018493644751	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	3	True	NA	-14	True	AATAAA	-29	NA	959256	944202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_944801_945056_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_20804.nic	chr12	-	1176	9	ISM	ENSG00000084463.8	ENST00000261167.7	4581	12	-52	6650	-44	-543	5prime_fragment	FALSE	canonical	3	1210	junction_1	78.6685094240383	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAGAAGAACATG	NA	False	NA	3	True	NA	NA	NA	14803530	14791231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_20806.known	chr12	+	1586	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAGTCTTTGGTTCTCA	-6	True	NA	NA	False	AAGAAA	-26	NA	14803669	14824415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14803752_14822911
transcript_20807.known	chr12	-	590	4	FSM	ENSG00000111348.9	ENST00000539131.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCCCTAGAACAAGAGG	-8	True	NA	NA	False	NA	NA	NA	14948896	14942369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_14942722_14944775_14944840_14947872_14947950_14948799
transcript_20808.known	chr12	+	727	4	FSM	ENSG00000139053.3	ENST00000266395.3	727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTGAAGTTGTATTAA	7	True	NA	NA	False	AATAAA	-19	NA	14973041	14981865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_14973087_14977971_14978147_14979178_14979220_14981399
transcript_20809.known	chr12	-	2264	5	FSM	ENSG00000134533.6	ENST00000256953.6	2264	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGTAATCTTTCTTG	28	True	NA	-1	True	AATAAA	-25	NA	15221417	15107782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_15109518_15111343_15111418_15121062_15121120_15217428_15217604_15221194
transcript_20810.known	chr12	-	1383	4	FSM	ENSG00000134533.6	ENST00000546331.5	1383	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTAAAATTTTATTT	28	True	NA	NA	False	NA	NA	NA	15221417	15108606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_15109518_15111343_15111418_15217428_15217604_15221194
transcript_20811.known	chr12	-	3873	21	FSM	ENSG00000151491.14	ENST00000644374.1	3873	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	5.62227711874824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTTTCTGTCTCATT	-3	True	NA	-19	True	AATAAA	-21	NA	15789388	15620161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
transcript_20812.known	chr12	-	3904	22	FSM	ENSG00000151491.14	ENST00000645775.1	3904	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_20	10.2002623237799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATAAACAGTATTTGCT	-3	True	NA	-48	True	NA	NA	NA	15789388	15620190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15713265_15713326_15789160
transcript_20813.known	chr12	+	1442	11	FSM	ENSG00000023734.11	ENST00000025399.10	1442	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1026.04056450025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAGCAAGCAGAGAAA	-2	True	NA	NA	False	NA	NA	NA	15882393	15903014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15882820_15883082_15883122_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_20816.known	chr12	+	1874	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	0	0	0	0	multi-exon	FALSE	canonical	3	2342	junction_5	133.778239201862	3878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	-9	True	NA	89	True	AATAAA	-18	NA	15882386	15903478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_2082.known	chr1	+	2713	9	FSM	ENSG00000121774.18	ENST00000327300.12	2713	9	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	246.658544348255	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	4	True	NA	NA	False	AATAAA	-23	NA	32013867	32043877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_20822.known	chr12	+	1698	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	834.669161629325	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	-5	True	NA	53	True	NA	NA	NA	15882390	15903442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_20827.known	chr12	+	676	2	FSM	ENSG00000023734.11	ENST00000539887.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	2797	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	NA	False	NA	89	True	AATAAA	-18	NA	15900898	15903478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15901013_15902916
transcript_20834.known	chr12	+	1644	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_4	28.8920404263873	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGAATCTCTCTAGTT	-18	True	NA	111	True	ATTAAA	-25	NA	15911331	16037381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_20837.known	chr12	+	854	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	169.353753656513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTTCCAGAAAAGTT	13	True	NA	-86	True	NA	NA	NA	15911362	16036751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
transcript_20838.nic	chr12	+	1433	8	NIC	ENSG00000023697.13	novel	1644	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	35	junction_2	166.501578101242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTTCCTATAGTTTA	-5	True	NA	10	True	ATTAAA	-12	NA	15911293	16037280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_15911415_15956935_15957034_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_2084.known	chr1	+	1778	9	FSM	ENSG00000121775.18	ENST00000336294.10	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	35.0962961008708	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	-27	True	NA	80	True	AAAAAG	-21	NA	32072938	32102863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_20856.known	chr12	+	406	4	FSM	ENSG00000008394.13	ENST00000543076.5	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	1581.02526510138	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCTTACAGGTTGCT	-6	True	NA	NA	False	AATAGA	-37	NA	16347644	16363999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347711_16354230_16354271_16357604_16357700_16363794
transcript_20859.known	chr12	+	925	4	FSM	ENSG00000008394.13	ENST00000396210.8	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	203.960780543711	4870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	-6	True	NA	27	True	AATAAA	-16	NA	16347644	16364410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347711_16354230_16354379_16357604_16357700_16363794
transcript_20863.known	chr12	+	365	4	FSM	ENSG00000008394.13	ENST00000540126.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1697.77265851468	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTATTCCATTTCTT	19	False	NA	NA	False	NA	NA	NA	16347796	16363814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347899_16354230_16354379_16357604_16357700_16363794
transcript_20865.nic	chr12	+	937	3	NIC	ENSG00000008394.13	novel	925	4	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_2	1546.5	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	420	False	NA	27	True	AATAAA	-16	NA	16347537	16364410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_16347711_16354230_16354379_16363794
transcript_20867.known	chr12	+	546	3	FSM	ENSG00000008394.13	ENST00000540056.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	97.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAAGAATTCTGTACT	0	True	NA	NA	False	AGTAAA	-43	NA	16347777	16364071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347899_16354230_16354379_16363794
transcript_20868.known	chr12	+	551	2	FSM	ENSG00000008394.13	ENST00000537878.5	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATTTTCAGCTCTA	3	True	NA	NA	False	AAAACA	-19	NA	16347653	16354724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_16347711_16354230
transcript_2087.nic	chr1	+	1756	9	NIC	ENSG00000121775.18	novel	1778	9	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	41.8880576656402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	-3	True	NA	80	True	AAAAAG	-21	NA	32072896	32102863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32073052_32074950_32075078_32075666_32075823_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_20881.known	chr12	-	587	5	FSM	ENSG00000048540.16	ENST00000536172.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.0327613011847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGATCTATCAACATCAC	2990	False	NA	NA	False	AATGAA	-23	NA	16607185	16551227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16607046
transcript_20887.known	chr12	-	2403	5	FSM	ENSG00000048540.16	ENST00000453727.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	36.4648803645371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTCATGGTTAGGAG	3735	False	NA	NA	False	AAGAAA	-37	NA	16606440	16549374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16606338
transcript_20888.known	chr12	-	3759	4	FSM	ENSG00000048540.16	ENST00000320122.10	3759	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	40.7785346584314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTTTACATTTGGA	0	True	NA	-13	True	AATAAA	-20	NA	16605379	16548423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16604864
transcript_20889.known	chr12	-	3393	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	19.4821855949366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGCACTTAATTGGC	-1	True	NA	0	True	AATAAA	-16	NA	16606162	16548371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
transcript_20897.known	chr12	+	4238	26	FSM	ENSG00000052126.15	ENST00000299275.10	4238	26	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_18	30.6594194335118	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	4	True	NA	24	True	AATAAA	-17	NA	19129793	19376400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
transcript_209.nic	chr1	-	2800	19	NIC	ENSG00000188976.11	novel	2757	19	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	821	junction_1	220.204198163634	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCTCCTGGAGATT	7694	False	NA	-15	True	AATAAA	-28	NA	959285	944203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_20908.nic	chr12	+	1057	11	ISM	ENSG00000052126.15	ENST00000429027.7	4797	32	-43	101783	-43	8800	5prime_fragment	FALSE	canonical	1	1	junction_9	138.704325815744	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAAATGAGCAAAATTG	-9	True	NA	NA	False	ATTAAA	-27	NA	19129689	19274617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19270187_19270206_19274515
transcript_2091.nic	chr1	+	1684	8	NIC	ENSG00000121775.18	novel	1778	9	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	46.8606270481621	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	-3	True	NA	80	True	AAAAAG	-21	NA	32072896	32102863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32073052_32074950_32075078_32075602_32075823_32091674_32092012_32094783_32094972_32095659_32095763_32100441_32100563_32102430
transcript_20910.nic	chr12	+	1056	10	ISM	ENSG00000052126.15	ENST00000538714.5	6487	28	-106	99034	-43	8817	5prime_fragment	FALSE	canonical	3	313	junction_5	18.972364567548	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAGAAAAAAAGGCATTA	-9	True	NA	NA	False	ATTAAA	-44	NA	19129689	19274634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515
transcript_20917.known	chr12	+	1954	4	FSM	ENSG00000052126.15	ENST00000540972.5	1954	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	167.0056552602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGGTTCATTACT	9	True	NA	NA	False	AATAAA	-27	NA	19129751	19202003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19200324
transcript_20919.nic	chr12	+	881	4	NIC	ENSG00000052126.15	novel	1954	4	NA	NA	-43	76	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	161.361567777323	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATTGTCAGTTTGCT	-9	True	NA	NA	False	ATTAAA	-18	NA	19129689	19207809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_19129889_19130050_19130131_19132392_19132451_19207265
transcript_2092.known	chr1	+	1538	7	FSM	ENSG00000121775.18	ENST00000441402.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	24.1413660664751	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	-23	True	NA	83	True	AAAAAG	-24	NA	32072942	32102866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_20920.known	chr12	+	5830	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	10.7133332910015	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGACATTTTGCATTTG	-23	True	NA	NA	False	ATTAAA	-17	NA	19439491	19522227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
transcript_20921.known	chr12	+	780	3	FSM	ENSG00000139155.9	ENST00000535609.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAAAGTAGTCCTAGTG	-10	True	NA	NA	False	NA	NA	NA	20695570	20697496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_20695613_20695735_20695808_20696830
transcript_20927.known	chr12	-	2572	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	65.255055146879	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGGATGTCCAATCT	44	True	NA	NA	False	NA	NA	NA	21501551	21469801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
transcript_20928.nic	chr12	-	3499	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	80.083289975708	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-41	True	NA	-1	True	AATAAA	-23	NA	21501636	21468909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_2093.nic	chr1	+	1517	7	NIC	ENSG00000121775.18	novel	1778	9	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	42.3188951756646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	-3	True	NA	80	True	AAAAAG	-21	NA	32072896	32102863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32073052_32074950_32075078_32075666_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_20935.nic	chr12	-	2261	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	-1	-346	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	80.083289975708	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATTATTTTTGTAGT	-41	True	NA	-10	True	ATTAAA	-18	NA	21501636	21470147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_20937.nnic	chr12	-	3619	15	NNC	ENSG00000004700.16	novel	3745	15	NA	NA	-9	0	intron_retention	FALSE	canonical	2	7	junction_9	90.2531586874455	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-49	True	NA	-1	True	AATAAA	-23	NA	21501644	21468909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477835_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
transcript_20938.known	chr12	-	3745	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_14	30.2358923082066	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-40	True	NA	-1	True	AATAAA	-23	NA	21501635	21468909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
transcript_20939.nic	chr12	-	3490	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_14	82.8257329627473	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-28	True	NA	-1	True	AATAAA	-23	NA	21501623	21468909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
transcript_20940.nic	chr12	-	3459	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	85.3073674355006	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-47	True	NA	-1	True	AATAAA	-23	NA	21501642	21468909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501462
transcript_20945.nic	chr12	-	2252	15	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	12	-346	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	82.8257329627473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATTATTTTTGTAGT	-28	True	NA	-10	True	ATTAAA	-18	NA	21501623	21470147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
transcript_20948.known	chr12	+	4075	12	FSM	ENSG00000121350.16	ENST00000240651.14	4075	12	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	6.79572057855664	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTTACTTTTTTTT	-9	True	NA	NA	False	AATAAA	-36	NA	21437654	21471250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_20952.known	chr12	+	562	6	FSM	ENSG00000111711.10	ENST00000542194.1	562	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	222.808796953801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATAAAGTCATTTGAAG	-7	True	NA	NA	False	TTTAAA	-11	NA	21501852	21515746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884_21506977_21507116_21507152_21508382_21508562_21512294_21512377_21515668
transcript_20954.known	chr12	+	1210	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	215.259842980524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAAACTTTTGTGG	22	True	NA	-6	True	NA	NA	NA	21501828	21516239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
transcript_20958.known	chr12	+	3253	5	FSM	ENSG00000111711.10	ENST00000229314.10	3253	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	60.2598539659697	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	-18	True	NA	NA	False	AATAAA	-37	NA	21501788	21518408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884_21506977_21508382_21508562_21512294_21512377_21515668
transcript_2096.nnic	chr1	+	1766	5	NNC	ENSG00000121774.18	novel	2713	9	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	968.337492819523	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	NA	False	NA	NA	False	AATAAA	-23	NA	32013737	32043877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_32013916_32037926_32038037_32038551_32038620_32039514_32039574_32042526
transcript_20961.known	chr12	+	813	3	FSM	ENSG00000111711.10	ENST00000535593.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	208.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATGGTTAAAATAAAAC	-26	True	NA	-14	True	ATTAAA	-45	NA	21501780	21516231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21512294_21512377_21515668
transcript_20963.known	chr12	+	555	2	FSM	ENSG00000111711.10	ENST00000545113.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAAACATCCAAGACTT	8	True	NA	NA	False	GATAAA	-17	NA	21501814	21507305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21501949_21506884
transcript_20965.known	chr12	+	1826	3	FSM	ENSG00000134548.11	ENST00000535139.5	1826	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGGCACCTGTCATTA	298	False	NA	NA	False	ATTAAA	-17	NA	21527434	21532523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_21527790_21529000_21529085_21531136
transcript_20977.known	chr12	-	1538	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_7	3915.96255011173	5404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	12	True	NA	-14	True	AATAAA	-19	NA	21657794	21635341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
transcript_20978.nnic	chr12	-	1342	8	NNC	ENSG00000111716.14	novel	1303	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3976.09418645885	5364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-3	True	NA	-14	True	AATAAA	-19	NA	21657843	21635341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657712
transcript_20979.known	chr12	-	1303	8	FSM	ENSG00000111716.14	ENST00000350669.5	1303	8	0	0	0	0	multi-exon	FALSE	canonical	3	9895	junction_2	1104.73640775175	17643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-2	True	NA	-14	True	AATAAA	-19	NA	21657842	21635341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
transcript_2099.known	chr1	+	7355	14	FSM	ENSG00000025800.14	ENST00000373625.8	7355	14	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_9	20.6434940393783	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGCT	2	True	NA	15	True	AATAAA	-17	NA	32108055	32176563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32108135_32154587_32154722_32156852_32156946_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_20992.known	chr12	+	1748	8	FSM	ENSG00000111726.13	ENST00000229329.7	1748	8	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_3	84.2493868444956	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGCCTTGTTGCTC	-7	True	NA	20	True	AATAAA	-21	NA	22046217	22065668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280_22061453_22062280_22062435_22065120
transcript_20994.known	chr12	-	4585	27	FSM	ENSG00000111731.13	ENST00000446597.6	4585	27	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	43.0623601757419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-31	True	NA	-35	True	AATAAA	-18	NA	22544542	22448582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_20995.known	chr12	-	3438	26	FSM	ENSG00000111731.13	ENST00000542676.5	3438	26	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	43.9087052872207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTAGACAGGCCCTG	258	False	NA	NA	False	NA	NA	NA	22544253	22449580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060
transcript_20998.known	chr12	-	4436	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_17	19.7102271817337	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-35	True	NA	-35	True	AATAAA	-18	NA	22544546	22448582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_21.known	ERCC-00059	+	509	1	FSM	ERCC-00059A	DQ668356	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00059_+_0_500
transcript_21002.known	chr12	+	7063	8	FSM	ENSG00000139163.16	ENST00000266517.9	7063	8	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_4	16.4788051875178	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTCATAAATTTTATT	12	True	NA	11	True	AATAAA	-37	NA	22625170	22690665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22625587_22643762_22644023_22659013_22659155_22661062_22661206_22671271_22671356_22673499_22673661_22684482_22684557_22684881
transcript_21004.known	chr12	+	1231	3	FSM	ENSG00000139163.16	ENST00000673496.1	1231	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTAGGGAAGGTCATTC	150	False	NA	NA	False	CATAAA	-41	NA	22625381	22657197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_22625587_22643762_22644023_22656431
transcript_2101.known	chr1	+	3941	14	FSM	ENSG00000025800.14	ENST00000471599.5	3941	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	93.6083367551158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4	True	NA	57	True	ATTAAA	-21	NA	32108057	32173173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32108135_32154587_32154722_32156852_32156928_32157345_32157446_32158266_32158362_32159399_32159532_32160618_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_21017.nic	chr12	+	2227	12	NIC	ENSG00000256995.8	novel	647	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	31.4450852825963	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAATTGACACATGA	1	True	NA	25	True	AATAAA	-35	NA	22699860	23174141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054155_23057165_23057298_23057779_23057898_23167038_23167079_23173388
transcript_21019.nic	chr12	+	2155	12	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-95	-320	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	26.5572825454403	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGGCTTTGGTGATG	3572	False	NA	6	True	AATAAA	-14	NA	22699763	23173803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23167038_23167079_23173388
transcript_2102.known	chr1	+	4865	11	FSM	ENSG00000084652.16	ENST00000373610.8	4865	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	29.5298154413467	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	-5	True	NA	14	True	AATAAA	-16	NA	32179674	32198285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_21020.nic	chr12	+	2445	12	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	26.5572825454403	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAATTGACACATGA	3620	False	NA	25	True	AATAAA	-35	NA	22699811	23174141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23167038_23167079_23173388
transcript_2103.known	chr1	+	880	6	FSM	ENSG00000160050.16	ENST00000373602.10	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	16.1319558640606	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	-36	True	NA	NA	False	ATTAAA	-16	NA	32200594	32205387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597_32204621_32205193
transcript_21039.nic	chr12	+	2067	11	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-47	-320	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	28.4255167059457	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGGCTTTGGTGATG	3620	False	NA	6	True	AATAAA	-14	NA	22699811	23173803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23173388
transcript_2105.known	chr1	+	1415	5	FSM	ENSG00000160050.16	ENST00000421922.6	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	14.8155323900291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	2	True	NA	NA	False	ATTAAA	-16	NA	32200632	32205387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597
transcript_2106.known	chr1	+	633	5	FSM	ENSG00000160050.16	ENST00000681230.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	133.54283020814	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	17	True	NA	NA	False	ATTAAA	-16	NA	32200647	32205387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204597_32204621_32205193
transcript_21068.nnic	chr12	+	3801	7	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-191	2493	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.3394490265821	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAGCACAGGAGTATT	3476	False	NA	NA	False	NA	NA	NA	22699667	23056734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_22700095_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990
transcript_21075.nic	chr12	+	1007	4	NIC	ENSG00000256995.8	novel	902	3	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGGATCGTTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	22859440	22871078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_22859546_22861068_22861225_22869320_22869414_22870425
transcript_21076.nnic	chr12	+	2653	3	Fusion	ENSG00000256923.1_ENSG00000256995.8	novel	424	2	NA	NA	-1	1954	multi-exon	FALSE	canonical	1	4	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGATCACATGAGAGGT	-2	True	NA	8	True	AATAAA	-17	NA	22699857	22745045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_+_22700095_22742543_22742633_22742718
transcript_21077.nic	chr12	+	728	2	ISM	ENSG00000256995.8	ENST00000629824.2	382	4	-93	179764	2	-23091	5prime_fragment	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAGAAGAAATCA	1	True	NA	NA	False	NA	NA	NA	22699860	22709149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_22700095_22708655
transcript_2108.known	chr1	+	2012	5	FSM	ENSG00000160051.12	ENST00000291358.11	2012	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3.93700393700591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	12	True	NA	12	True	AATAAA	-14	NA	32205670	32208682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207121_32207239
transcript_21080.nnic	chr12	+	698	3	NNC	ENSG00000256923.1	novel	424	2	NA	NA	-42723	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTTCATATCAAGCCT	-1	True	NA	22	True	NA	NA	NA	22699858	22743091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_22700095_22742543_22742633_22742718
transcript_21081.nnic	chr12	+	1460	3	Fusion	ENSG00000256923.1_ENSG00000256995.8	novel	424	2	NA	NA	-143	619	multi-exon	TRUE	canonical	1	4	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTGTTTTGGTTTTG	3524	False	NA	NA	False	NA	NA	NA	22699715	22743710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_+_22700095_22742543_22742633_22742718
transcript_21087.known	chr12	-	9314	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_7	58.9882191628125	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGACTGTTTGTATCC	-37	True	NA	-7	True	AATAAA	-16	NA	24949101	24810023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_21091.known	chr12	-	4694	11	FSM	ENSG00000060982.15	ENST00000538118.5	4694	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	207.508288991067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGAGGCAGAGGCAGG	-13	True	NA	25	True	AAGAAA	-30	NA	24902296	24814802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24901962
transcript_21094.known	chr12	-	1811	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_10	200.0416206693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATATCTGTTTTCTTC	9	True	NA	NA	False	NA	NA	NA	24903075	24817480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
transcript_21098.known	chr12	-	1360	10	FSM	ENSG00000060982.15	ENST00000539780.5	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	208.745695601367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAACTTACCTTAC	21	True	NA	5	True	AATGAA	-32	NA	24949043	24817808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24901813_24901886_24948926
transcript_2110.known	chr1	+	2089	4	FSM	ENSG00000160051.12	ENST00000617816.1	2089	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGATGATGCCACTGC	12	True	NA	NA	False	NA	NA	NA	32205670	32208548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32205724_32206153_32206762_32207001_32207121_32207239
transcript_21113.known	chr12	-	521	2	FSM	ENSG00000060982.15	ENST00000355164.3	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAATGTTCCTACTGT	3	True	NA	NA	False	NA	NA	NA	24949061	24945430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_24945817_24948926
transcript_21115.known	chr12	-	5306	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	52.6515669282501	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-15	True	NA	-4	True	AATAAA	-16	NA	25250929	25205245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_21117.known	chr12	+	1242	3	FSM	ENSG00000205707.11	ENST00000381356.9	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	1.5	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTCACTGGTATAC	-3	True	NA	138	True	AATAAA	-22	NA	25195236	25205143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_25195338_25203919_25204008_25204090
transcript_21124.known	chr12	+	4348	3	FSM	ENSG00000123096.12	ENST00000422622.3	4348	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGACGTGCTTTAAA	-6	True	NA	13	True	AATAAA	-23	NA	26195339	26234779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26195532_26224292_26224380_26230710
transcript_2113.known	chr1	+	1416	11	FSM	ENSG00000084623.12	ENST00000677378.1	1416	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	486.799640509317	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222540_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21130.known	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_15	22.916884468662	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	17	True	NA	-19	True	AATAAA	-27	NA	26937981	26905180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_21131.nnic	chr12	-	2954	17	NNC	ENSG00000064102.15	novel	2634	17	NA	NA	21	0	intron_retention	FALSE	canonical	3	17	junction_8	94.6726060893541	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	11	True	NA	-19	True	AATAAA	-27	NA	26938283	26905180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917460_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_21136.nic	chr12	-	2769	16	NIC	ENSG00000064102.15	novel	2634	17	NA	NA	17	0	intron_retention	FALSE	canonical	3	39	junction_5	92.4473664068131	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	7	True	NA	-19	True	AATAAA	-27	NA	26938287	26905180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_21139.nic	chr12	-	2186	14	ISM	ENSG00000064102.15	ENST00000261191.12	2634	17	-294	8386	29	453	5prime_fragment	FALSE	canonical	3	342	junction_12	20.499675275246	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAACGAAAGAA	19	True	NA	-69	True	NA	NA	NA	26938275	26913566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_2114.known	chr1	+	1276	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	494.944895922768	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
transcript_21142.known	chr12	+	2932	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	54.2107512911928	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	-4	True	NA	10	True	ATTAAA	-20	NA	26938469	26966648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
transcript_21145.known	chr12	+	2790	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	46.5978540278412	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	-8	True	NA	12	True	ATTAAA	-22	NA	26938499	26966650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
transcript_21148.known	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	37.7458607002145	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	-11	True	NA	NA	False	NA	NA	NA	26938496	26960846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
transcript_21149.known	chr12	+	865	4	FSM	ENSG00000111790.14	ENST00000395941.4	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	10.3708994574027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGTACGTTGAAAAAT	10	True	NA	NA	False	TATAAA	-24	NA	26938483	26957971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600
transcript_21156.known	chr12	+	2669	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	29.8923996285938	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	-7	True	NA	20	True	ATTAAA	-22	NA	27022557	27030673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
transcript_2116.known	chr1	-	1538	11	FSM	ENSG00000160055.20	ENST00000491434.5	1538	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	19.7050754883101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGTGCCAAATATAC	12	True	NA	-49	True	AATATA	-13	NA	32222333	32214476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32215050_32215135_32215217_32215672_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866_32222019_32222306
transcript_21162.known	chr12	+	1374	3	FSM	ENSG00000152944.9	ENST00000536503.5	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	260.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATGCTGAGCTACAT	-15	True	NA	NA	False	GGGGCT	-9	NA	27022549	27029485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27022622_27027346_27027448_27028284
transcript_21164.known	chr12	+	414	1	FSM	ENSG00000152944.9	ENST00000621885.1	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	6940	False	NA	20	True	ATTAAA	-22	NA	27030259	27030673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27030300_27030700
transcript_21167.known	chr12	+	4957	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	0	0	0	0	multi-exon	FALSE	canonical	1	193	junction_7	91.4886742432794	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	13	True	NA	14	True	AATAAA	-17	NA	27244285	27325959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
transcript_21172.nic	chr12	+	789	7	ISM	ENSG00000211455.8	ENST00000389032.8	4957	14	-34	11276	-3	-423	5prime_fragment	FALSE	canonical	3	478	junction_3	34.7790645839323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTGATTATTTTTT	-21	True	NA	NA	False	AATAAA	-13	NA	27244251	27314683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503
transcript_21173.known	chr12	+	581	3	FSM	ENSG00000211455.8	ENST00000539863.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTCTAGTTCAGTGC	-6	True	NA	NA	False	TTTAAA	-6	NA	27244266	27302506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27244333_27297709_27297855_27302136
transcript_21175.known	chr12	+	3208	28	FSM	ENSG00000110841.14	ENST00000542629.5	3208	28	0	0	0	0	multi-exon	TRUE	canonical	2	48	junction_11	31.0393793865524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGCACCTGGATGAACA	36	False	NA	NA	False	NA	NA	NA	27524223	27692882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883_27660946_27664361_27664438_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
transcript_2118.known	chr1	+	1256	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	534.424393248255	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	3	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21181.known	chr12	+	1191	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	52.654006917275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	1	False	NA	NA	False	AAAAAG	-17	NA	27524141	27658848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
transcript_21182.nic	chr12	+	1188	10	ISM	ENSG00000110841.14	ENST00000542629.5	3208	28	-94	31981	-12	2053	5prime_fragment	FALSE	canonical	2	95	junction_9	38.0733535023326	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAAGCTGTGGAGTCC	NA	False	NA	NA	False	NA	NA	NA	27524129	27660901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883
transcript_21185.known	chr12	+	875	6	FSM	ENSG00000110841.14	ENST00000535047.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	2	113	junction_4	43.4695295580709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTAGTAGAGTCTCA	32	True	NA	NA	False	ATTAAA	-10	NA	27524219	27647977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728
transcript_21187.known	chr12	+	2805	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	35.7988205888903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAGTTGTTTTAAAT	-30	True	NA	NA	False	GATAAA	-20	NA	27524157	27637319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
transcript_2119.known	chr1	+	1400	10	FSM	ENSG00000084623.12	ENST00000678883.1	1400	10	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	240.608231338112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGATCTCCAACCA	3	True	NA	-66	True	AAAAAG	-2	NA	32222423	32231505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926
transcript_21190.known	chr12	+	1829	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	43.54261342264	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	11	True	NA	NA	False	AATAAA	-17	NA	27710831	27756295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
transcript_21192.known	chr12	+	1715	7	FSM	ENSG00000061794.13	ENST00000538315.5	1715	7	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_5	203.100139504301	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAATAGACTTATT	14	True	NA	NA	False	AATAAA	-16	NA	27710834	27756294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27737538_27737609_27755180
transcript_2120.known	chr1	+	1343	10	FSM	ENSG00000084623.12	ENST00000677767.1	1343	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	524.249516504837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTTGTGGTGTCTGTT	3	True	NA	29	True	AATAAA	-30	NA	32222406	32231600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32230926_32231020_32231114
transcript_21201.known	chr12	+	1894	4	FSM	ENSG00000087448.11	ENST00000539176.1	1894	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	33.7671766990109	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACATGACTGAATTGAA	166	False	NA	-6	True	AATAAA	-3	NA	27780047	27798156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_27781203_27791707_27791902_27797246_27797350_27797714
transcript_21205.known	chr12	+	2738	16	FSM	ENSG00000123106.11	ENST00000545336.5	2738	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	47.4252628411858	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	-11	True	NA	16	True	AATAAA	-18	NA	28190445	28550166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28190642_28225794_28225862_28226139_28226200_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_2121.known	chr1	+	1200	10	FSM	ENSG00000084623.12	ENST00000677580.1	1200	10	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_5	520.01334265883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCACAGAAGGTTTTGAA	12	False	NA	-34	True	AAAAAG	-34	NA	32222432	32231537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21217.nnic	chr12	+	2614	14	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	42.4799291277448	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	-14	True	NA	16	True	AATAAA	-18	NA	28190442	28550166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_28190642_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_2122.known	chr1	+	1503	10	FSM	ENSG00000084623.12	ENST00000677676.1	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	248.583294533216	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21221.nic	chr12	+	1623	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-30	926	-1	0	multi-exon	FALSE	canonical	3	64	junction_1	24.6570927366189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAAGATGTGTTTGTT	0	True	NA	NA	False	GATAAA	-32	NA	28190425	28549240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_21222.nic	chr12	+	2549	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-30	0	-1	0	multi-exon	FALSE	canonical	3	64	junction_1	24.6570927366189	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	0	True	NA	16	True	AATAAA	-18	NA	28190425	28550166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_2123.known	chr1	+	1250	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	532.259288897135	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	7	False	NA	33	True	AATAAA	-34	NA	32222427	32231604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21230.nnic	chr12	+	1267	12	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	42.6401432711221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAATTTAGAAAAAG	4	True	NA	NA	False	AAAAAG	-41	NA	28190429	28452527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_28190642_28225794_28225862_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_21237.known	chr12	+	1301	11	ISM	ENSG00000123106.11	ENST00000536442.6	2519	13	-18	97530	-6	-4	5prime_fragment	FALSE	canonical	3	64	junction_1	25.8203408188196	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAATAAGTCAGGT	-19	True	NA	NA	False	AAAAAG	-33	NA	28190437	28452636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_21253.known	chr12	+	2334	12	FSM	ENSG00000123106.11	ENST00000381259.5	2334	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17.2113742902383	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTACTTTTTGT	2	True	NA	15	True	AATAAA	-17	NA	28257199	28550165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_21255.nic	chr12	+	2156	13	FSM	ENSG00000064763.12	ENST00000686419.1	2115	13	-32	-9	-2	9	multi-exon	FALSE	canonical	3	7	junction_12	43.2473505932252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTCCTTCAATCGGG	-29	True	NA	NA	False	ATTAAA	-27	NA	29149100	29341130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631_29333735_29340807
transcript_21257.known	chr12	+	3538	12	FSM	ENSG00000064763.12	ENST00000536681.8	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_6	19.7488361410393	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTCTTCTAGTGTTGT	11	True	NA	9	True	AATAAA	-18	NA	29149277	29335616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631
transcript_21262.known	chr12	+	871	2	FSM	ENSG00000064763.12	ENST00000549080.1	871	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGGAAGTGAGGAGCGC	16	False	NA	NA	False	NA	NA	NA	29149209	29172050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_29149408_29171377
transcript_21264.known	chr12	-	5033	14	FSM	ENSG00000087502.19	ENST00000360150.9	5033	14	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_4	45.7592102799402	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTCTTTTTAATA	-5	True	NA	-1	True	AATAAA	-16	NA	29381172	29337351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_29341219_29341733_29341817_29343119_29343283_29345442_29345541_29349078_29349178_29350012_29350069_29356381_29356478_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
transcript_21279.known	chr12	-	693	9	FSM	ENSG00000087502.19	ENST00000552155.5	693	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	173.933895489062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAAAATTGCTATAGA	6	True	NA	NA	False	NA	NA	NA	29381161	29349100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_29349178_29350012_29350069_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
transcript_21280.known	chr12	-	4228	20	FSM	ENSG00000133687.16	ENST00000551659.5	4228	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	16.10921864051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACACACTCTTCTTTTTT	861	False	NA	NA	False	TATAAA	-15	NA	29783897	29505598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29659879_29659984_29660803_29660886_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
transcript_21283.known	chr12	-	3254	14	FSM	ENSG00000133687.16	ENST00000319685.12	3254	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	32.3775800872717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGTCCTACTTTATTA	NA	False	NA	-2	True	ATTAAA	-14	NA	29641238	29505981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29640559
transcript_21285.known	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	25.7859444379211	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	11	True	NA	-11	True	AATAAA	-21	NA	30695869	30628987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_21291.nic	chr12	-	1685	3	ISM	ENSG00000110888.18	ENST00000548676.5	3221	16	36637	0	890	0	3prime_fragment	FALSE	canonical	3	110	junction_1	24.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	1286	False	NA	-6	True	AATAAA	-14	NA	30714487	30709552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_30710471_30711565_30711630_30713784
transcript_21292.known	chr12	-	451	1	FSM	ENSG00000110888.18	ENST00000614865.1	451	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTCTGTGTGTTTA	396	False	NA	NA	False	AATAAA	-17	NA	30715377	30714926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_30714900_30715400
transcript_21293.known	chr12	+	16489	5	FSM	ENSG00000285517.1	ENST00000648050.1	16489	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.78535710713571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGCATGCCTAATCTT	69	False	NA	NA	False	AATAAA	-25	NA	30795810	30817435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_30796217_30798144_30798316_30799912_30800022_30800533_30800602_30801700
transcript_21297.known	chr12	+	2391	4	FSM	ENSG00000285517.1	ENST00000650193.1	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATTCCCACTTTACC	29	False	NA	NA	False	TTTAAA	-27	NA	30795457	30803155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_30796217_30799912_30800022_30800533_30800602_30801700
transcript_21299.known	chr12	+	1431	6	FSM	ENSG00000285517.1	ENST00000649043.1	1431	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.00399840127872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTTGCTCTGTCA	16	False	NA	NA	False	AATATA	-27	NA	30795982	30802321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_30796217_30796982_30797211_30798144_30798316_30799912_30800022_30800533_30800602_30801700
transcript_2130.known	chr1	+	1141	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	527.063800692098	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21301.nnic	chr12	-	1709	3	FSM	ENSG00000245614.5	ENST00000685910.1	1384	3	-325	0	-271	0	multi-exon	FALSE	canonical	0	0	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTTTATAGTTTGT	NA	False	NA	0	True	AATAAA	-24	NA	31074118	31020761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31021436_31060659_31060771_31073194
transcript_21302.known	chr12	-	2031	3	FSM	ENSG00000245614.5	ENST00000500527.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTTTATAGTTTG	NA	False	NA	-1	True	AATAAA	-23	NA	31073847	31020762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31022030_31060659_31060771_31073194
transcript_21303.known	chr12	-	494	2	FSM	ENSG00000245614.5	ENST00000618041.2	810	2	305	11	279	-11	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGGCCACCTATCTTC	280	False	NA	NA	False	ATTAAA	-13	NA	31073507	31060589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31060771_31073194
transcript_21315.known	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	61.0150820427736	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	-15	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_21316.nic	chr12	-	739	7	FSM	ENSG00000177359.21	ENST00000688821.1	750	7	5	6	-1	0	multi-exon	FALSE	canonical	2	4	junction_6	8.91471941354422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	-11	True	NA	-4	True	ATTAAA	-16	NA	31119111	31111656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
transcript_21317.nnic	chr12	-	814	7	NNC	ENSG00000177359.21	novel	781	7	NA	NA	-2246	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.1612007164508	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31121362	31111656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31121138
transcript_21318.nnic	chr12	-	812	7	NIC	ENSG00000177359.21	novel	781	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	9.52919490594854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	-14	True	NA	-4	True	ATTAAA	-16	NA	31119114	31111656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31118896
transcript_21319.nnic	chr12	-	1981	6	NIC	ENSG00000177359.21	novel	749	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_5	10.1666120217111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGAGTCTATGACTTTT	-14	True	NA	-6	True	ATTAAA	-14	NA	31119114	31111658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117485_31118896
transcript_21325.nnic	chr12	-	3159	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	464	junction_5	1176.06259281648	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	14	False	NA	-34	True	AATAAA	-24	NA	31326226	31280583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
transcript_21329.known	chr12	-	1555	6	FSM	ENSG00000139146.14	ENST00000454658.6	1555	6	0	0	0	0	multi-exon	TRUE	canonical	3	136	junction_5	1168.61473548813	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCCTCATGATAATAAA	-5	True	NA	-55	True	NA	NA	NA	31324162	31282061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31323943
transcript_21332.known	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2685	junction_5	221.244118565895	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	0	True	NA	-34	True	AATAAA	-24	NA	31326150	31280583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
transcript_21335.known	chr12	-	2532	3	FSM	ENSG00000139146.14	ENST00000539409.5	2532	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1425	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	9	True	NA	-34	True	AATAAA	-24	NA	31326116	31280583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31282872_31287633_31287785_31326023
transcript_21336.known	chr12	-	868	2	FSM	ENSG00000256232.1	ENST00000541749.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATACCTTAAGCTAAT	445	False	NA	-7	True	AATAAA	-17	NA	31369301	31363480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31363796_31368748
transcript_21338.known	chr12	-	1723	4	FSM	ENSG00000170456.16	ENST00000546299.1	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	9.84321537348893	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTGTGCGTTAAATTG	3763	False	NA	-25	True	AATAAA	-21	NA	31495902	31451701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809
transcript_21339.known	chr12	-	1025	9	FSM	ENSG00000151743.11	ENST00000536761.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	54.799635035281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGCTTATCAAAACTAC	1	True	NA	NA	False	NA	NA	NA	31729021	31672277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_21345.known	chr12	-	1952	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	25.8886504519301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATCACATTTTCCCCTT	1	True	NA	-5	True	AATAAA	-25	NA	31729021	31671141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
transcript_21352.known	chr12	-	880	6	FSM	ENSG00000151743.11	ENST00000541931.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	41.0268204958659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTAGCTAAGTCTTG	-7	True	NA	-76	True	NA	NA	NA	31729110	31672169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31728970
transcript_21356.known	chr12	-	560	5	FSM	ENSG00000151743.11	ENST00000509386.2	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1.29903810567666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCCTGAGTAGTTGGG	3	True	NA	NA	False	NA	NA	NA	31729100	31709079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31709168_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_21357.known	chr12	+	2055	4	FSM	ENSG00000139160.13	ENST00000395763.7	2055	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGATGCTTGTT	7008	False	NA	NA	False	TTTAAA	-40	NA	31659186	31668967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31659363_31661840_31662268_31666086_31666218_31667646
transcript_21360.known	chr12	-	430	3	FSM	ENSG00000151743.11	ENST00000422146.6	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATCCGCCTCAGCCTC	7	True	NA	NA	False	NA	NA	NA	31729057	31708957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_31709168_31709292_31709426_31728970
transcript_21362.known	chr12	+	6234	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	55.9464029227975	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	-1	True	NA	9	True	AATAAA	-23	NA	31959414	31993107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
transcript_21363.known	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	97.8749201787669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	22	False	NA	-33	True	NA	NA	NA	31959437	31992941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
transcript_21364.nic	chr12	+	521	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	0	12049	0	-2	5prime_fragment	FALSE	canonical	3	130	junction_1	12.675435561221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCAGAGTTCTTTCAGC	-1	True	NA	3	True	AATAAA	-15	NA	31959414	31981058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_21366.nic	chr12	+	2493	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-51	10128	-6	0	5prime_fragment	FALSE	canonical	3	130	junction_1	12.675435561221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTTCCCTGTGGAAAA	127	False	NA	NA	False	NA	NA	NA	31959363	31982979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_21368.nic	chr12	+	4357	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-51	8264	-6	1864	5prime_fragment	FALSE	canonical	3	130	junction_1	12.675435561221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGTTTCACGAGGTAAC	127	False	NA	NA	False	GATAAA	-34	NA	31959363	31984843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_21369.nic	chr12	+	4638	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-51	7983	-6	2145	5prime_fragment	FALSE	canonical	3	130	junction_1	12.675435561221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATGATAAACAAGAAC	127	False	NA	NA	False	AGTAAA	-7	NA	31959363	31985124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_2137.known	chr1	+	987	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	589.200211209135	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21371.known	chr12	+	814	4	FSM	ENSG00000174718.12	ENST00000397578.7	814	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	112.775095753549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTGTTTTATAACTAA	-3	True	NA	-5	True	AATATA	-3	NA	31959448	31992969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31987238_31987323_31992377
transcript_21372.known	chr12	+	362	3	FSM	ENSG00000174718.12	ENST00000540924.5	362	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	48	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAGTTCTTTCAGCTA	-8	True	NA	5	True	AATAAA	-17	NA	31959407	31981060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31980877
transcript_21376.known	chr12	+	674	3	FSM	ENSG00000174718.12	ENST00000541981.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	61	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGGAGGACCGTTCCT	133	False	NA	NA	False	TTTAAA	-39	NA	31959369	31992834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_31959492_31960776_31960872_31992377
transcript_21377.nic	chr12	+	1536	2	ISM	ENSG00000174718.12	ENST00000540924.5	362	3	7	18825	0	-8011	5prime_fragment	FALSE	canonical	3	130	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTTGTGAAGGTGAA	-1	True	NA	NA	False	TTTAAA	-13	NA	31959414	31962235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_31959492_31960776
transcript_21379.known	chr12	+	9419	10	FSM	ENSG00000151746.15	ENST00000652176.1	9419	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	35.8911248013513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCTGCCTTTTTATCA	35	True	NA	29	True	AATAAA	-24	NA	32106846	32383633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337817_32338785_32338980_32367669_32367746_32377539
transcript_21381.known	chr12	+	766	2	FSM	ENSG00000151746.15	ENST00000547680.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	423	False	NA	15	True	AATAAA	-22	NA	32328401	32333065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32328556_32332453
transcript_21382.known	chr12	+	8465	17	FSM	ENSG00000139132.16	ENST00000534526.7	8465	17	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.3652062208139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTTTACATGTTA	12	True	NA	20	True	AATAAA	-17	NA	32399557	32646050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_21385.known	chr12	+	2931	17	FSM	ENSG00000139132.16	ENST00000583694.2	2931	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.9764611288988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGAGCATTTTTTGA	15	True	NA	NA	False	GATAAA	-17	NA	32502159	32640739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32502339_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_21388.known	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_14	66.5023691078213	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	1	True	NA	NA	False	NA	NA	NA	32679300	32745650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_2139.known	chr1	-	969	7	FSM	ENSG00000160055.20	ENST00000483001.5	969	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	20.3367483471014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCCAGGGACAAGG	10	True	NA	NA	False	GGGGCT	-30	NA	32222335	32215846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_21393.known	chr12	+	2393	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	96.6620688561731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	20	True	NA	-23	True	TATAAA	-40	NA	32679319	32743581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_21394.known	chr12	+	4439	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_14	55.4817287241685	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	NA	False	NA	NA	False	AATAAA	-26	NA	32679199	32745552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_21400.known	chr12	+	3101	18	FSM	ENSG00000087470.19	ENST00000266481.10	3101	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	91.1636423613126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCATAGCTTCATACCA	3	True	NA	NA	False	NA	NA	NA	32679302	32744350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_21409.known	chr12	-	2117	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_4	8.1967981553775	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-7	True	NA	NA	False	NA	NA	NA	32755897	32746543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
transcript_21415.known	chr12	-	4229	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_8	21.0256126875982	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAAAGTAGTGTTGC	12	True	NA	-12	True	AATAAA	-26	NA	32896777	32790754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
transcript_21419.known	chr12	-	1563	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAATTCCAGGAAGAAA	188	False	NA	NA	False	NA	NA	NA	32896601	32893308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_32894779_32896508
transcript_21421.known	chr12	+	2913	3	FSM	ENSG00000139133.7	ENST00000266483.7	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACATATTTTGTGAT	12	True	NA	9	True	AATAAA	-24	NA	34022495	34028302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_34022771_34023961_34024160_34025862
transcript_21424.known	chr12	+	10050	3	FSM	ENSG00000175548.9	ENST00000308742.9	10050	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAATGTGTTGTGTCT	-1	True	NA	NA	False	AATAAA	-17	NA	38316773	38329721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_38317065_38318260_38318459_38320160
transcript_21425.known	chr12	-	3431	20	FSM	ENSG00000139117.14	ENST00000331366.10	3431	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	3.35936282047009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTTGTCAAACATC	0	True	NA	-13	True	AATAAA	-15	NA	38905591	38652202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38685489_38685618_38693656_38693839_38702874_38702922_38723771_38723834_38724845_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_21427.nic	chr12	-	1206	12	ISM	ENSG00000139117.14	ENST00000331366.10	3431	20	-334	72680	-334	1476	5prime_fragment	FALSE	canonical	3	11	junction_4	3.62953905048675	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAAAAAGAAAAAAT	17	True	NA	NA	False	NA	NA	NA	38905925	38724882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_21428.known	chr12	+	526	2	FSM	ENSG00000257718.1	ENST00000551152.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGCTTGCAGTAATTTGT	NA	False	NA	25	True	AATAAA	-20	NA	38906450	38909592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_38906694_38909309
transcript_21429.known	chr12	-	967	3	FSM	ENSG00000258144.2	ENST00000662938.1	967	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCCTGATTTGCTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	39145471	39087346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_39087993_39092465_39092683_39145367
transcript_2143.known	chr1	-	972	5	FSM	ENSG00000160055.20	ENST00000487174.1	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	23.9217474278114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGCTACCTCATGGA	26	False	NA	NA	False	NA	NA	NA	32222319	32216729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866
transcript_21433.known	chr12	+	5507	23	FSM	ENSG00000018236.15	ENST00000347616.5	5507	23	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_17	14.6578752138611	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGAACAACTGTCCTT	2	False	NA	NA	False	AATAAA	-16	NA	40908353	41072406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_40908494_40910072_40910106_40918638_40918772_40922255_40922429_40924556_40924653_40929795_40930003_40933460_40933561_40933696_40933879_40936780_40936906_40937569_40937688_40939334_40939486_40943596_40943725_40943994_40944171_40959113_40959235_40980908_40981068_40993119_40993270_41014227_41014299_41016681_41016917_41020336_41020441_41025149_41025337_41027856_41027970_41029062_41029220_41069958
transcript_21439.known	chr12	-	4096	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATTC	-13	True	NA	NA	False	AATAAA	-18	NA	42238248	42157103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
transcript_2144.known	chr1	-	1107	5	FSM	ENSG00000160055.20	ENST00000309777.11	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	16.0390149323454	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-8	True	NA	-2	True	AATAAA	-16	NA	32222353	32216199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_21450.known	chr12	+	3377	12	FSM	ENSG00000134283.18	ENST00000432191.6	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	169.930710235059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	14	True	NA	13	True	AATAAA	-15	NA	42326177	42448618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
transcript_21458.known	chr12	+	1693	11	FSM	ENSG00000134283.18	ENST00000395580.7	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	165.454041957276	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	NA	False	NA	24	True	AATAAA	-15	NA	42326144	42441950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21462.known	chr12	+	1859	10	FSM	ENSG00000134283.18	ENST00000358314.12	1859	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	130.373821503143	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	3	True	NA	NA	False	AATAAA	-34	NA	42326166	42442181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21472.known	chr12	+	1863	10	FSM	ENSG00000134283.18	ENST00000613154.4	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	153.485994857133	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	-15	True	NA	NA	False	AATAAA	-34	NA	42326148	42442181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21475.known	chr12	+	1095	10	FSM	ENSG00000134283.18	ENST00000552761.5	1095	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	175.275515040862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAAAAATTTTTTTTC	7	True	NA	50	True	AAAACA	-1	NA	42326170	42441543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21476.known	chr12	+	1583	9	FSM	ENSG00000134283.18	ENST00000449194.6	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	63.0114076973368	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	4	True	NA	37	True	AATAAA	-28	NA	42326167	42441963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21479.nic	chr12	+	1470	9	ISM	ENSG00000134283.18	ENST00000337898.10	1465	11	15	3496	2	0	5prime_fragment	FALSE	canonical	3	122	junction_4	147.406697185033	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	-4	True	NA	24	True	AATAAA	-15	NA	42326159	42441950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_2148.known	chr1	-	1411	4	FSM	ENSG00000160055.20	ENST00000373593.5	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.34846922834953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTAGTAAGTATTCTTT	2	True	NA	1	True	AATAAA	-19	NA	32222343	32216196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32217352_32221130_32221198_32221866_32222019_32222306
transcript_21484.nic	chr12	+	1425	8	NIC	ENSG00000134283.18	novel	1693	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	93.9611296098074	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	-16	True	NA	24	True	AATAAA	-15	NA	42326147	42441950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_21492.known	chr12	+	847	4	FSM	ENSG00000134283.18	ENST00000549774.5	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	40.2326567189723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGGTTGCAGTGAGC	-6	True	NA	-61	True	NA	NA	NA	42326157	42355678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160
transcript_21498.known	chr12	-	1808	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_3	36.5155823601657	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATCTTGTGTTTCC	9	True	NA	NA	False	ATTAAA	-19	NA	42326094	42312085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_21499.known	chr12	-	1199	8	FSM	ENSG00000139168.9	ENST00000552235.2	1199	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	194.961429989815	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTTTAAATATGG	NA	False	NA	-16	True	AATAAA	-12	NA	42326147	42312780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42313232_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_21501.known	chr12	-	4277	9	FSM	ENSG00000139174.12	ENST00000455697.6	4277	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	40.3081877538547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAATAAATAACAAAACTA	NA	False	NA	NA	False	AATAAA	-3	NA	42484341	42458371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757_42483986_42484273
transcript_21504.known	chr12	-	5761	8	FSM	ENSG00000139174.12	ENST00000639589.1	5761	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	33.8990096779074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTTAGTCTATTCTC	NA	False	NA	-9	True	AATAAA	-10	NA	42484444	42456762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42484273
transcript_21507.nnic	chr12	+	2171	2	Antisense	novelGene_ENSG00000139174.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGTATAAGCGTTATCT	NA	False	NA	NA	False	NA	NA	NA	42565173	42567813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_+_42565281_42565749
transcript_2151.known	chr1	-	1169	4	FSM	ENSG00000220785.8	ENST00000403496.7	1172	4	0	3	0	0	multi-exon	FALSE	canonical	3	28	junction_2	9.89949493661167	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	1285	False	NA	-2	True	AATAAA	-18	NA	32240422	32231659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32231970_32232041_32232185_32234951_32235114_32239868
transcript_21510.known	chr12	-	13567	9	FSM	ENSG00000129317.15	ENST00000344862.10	13567	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	10.1242283656583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	-18	True	NA	39	True	AATAAA	-15	NA	43758790	43718991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758729
transcript_21511.known	chr12	-	3313	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	14.1901153976985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAAGCTATATG	-1	True	NA	19	True	AATAAA	-9	NA	43758773	43729257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
transcript_21516.known	chr12	-	1149	4	FSM	ENSG00000129317.15	ENST00000553166.1	1149	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	12.4721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAATGAATGT	5	True	NA	14	True	AAAAAG	-6	NA	43758767	43746213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43746239_43748449_43748610_43754335_43755262_43758729
transcript_21517.nic	chr12	-	1560	3	ISM	ENSG00000129317.15	ENST00000416848.6	4364	9	-1	19843	0	-2236	5prime_fragment	FALSE	canonical	2	7	junction_2	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAGATATTAAGAAAT	13	True	NA	NA	False	NA	NA	NA	43758759	43748449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_43748610_43754335_43755262_43758285
transcript_21520.known	chr12	-	4364	9	FSM	ENSG00000129317.15	ENST00000416848.6	4364	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	13.683361246419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	14	True	NA	-11	True	AATAAA	-20	NA	43758758	43728606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758285
transcript_21521.known	chr12	+	4284	12	FSM	ENSG00000198001.15	ENST00000613694.5	4284	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.65812124494566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGCTTTAATTTTT	-24	True	NA	6	True	ATTAAA	-16	NA	43758950	43789541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_43759017_43768102_43768273_43771219_43771366_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_21525.known	chr12	+	1348	11	FSM	ENSG00000198001.15	ENST00000550615.5	1348	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.21369455316239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATCTCAACCATTTTT	-25	True	NA	NA	False	NA	NA	NA	43758949	43786750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_43759017_43768102_43768273_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_21528.known	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	8.30662386291807	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	4	True	NA	-2	True	AATAAA	-17	NA	43806317	43793722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_21530.known	chr12	-	3196	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	36.7843376996243	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACATGTGAGTCTGAG	845	False	44876373	-12	True	AATAAA	-16	NA	44876355	44508281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
transcript_21531.known	chr12	-	3553	20	FSM	ENSG00000184613.11	ENST00000429094.7	3553	20	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	19.5107754871713	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTGAGTCTGAGTATC	12	True	NA	-8	True	AATAAA	-20	NA	44876315	44508277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
transcript_21533.nic	chr12	-	2079	4	FSM	ENSG00000134297.7	ENST00000691674.1	2044	4	-52	17	-31	-17	multi-exon	FALSE	canonical	0	0	junction_2	21.4165045389453	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	NA	False	NA	NA	False	AATAAA	-28	NA	45216078	45173063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45174643_45176240_45176434_45190793_45190962_45215939
transcript_21534.known	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	14	junction_2	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	2	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45174643_45176240_45176434_45215939
transcript_21535.known	chr12	-	277	3	FSM	ENSG00000134297.7	ENST00000545609.3	876	3	-17	616	0	-393	multi-exon	FALSE	canonical	0	0	junction_1	26	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGGTGATCGGACCTA	NA	False	NA	NA	False	NA	NA	NA	45216041	45176426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45176434_45190793_45190962_45215939
transcript_21538.known	chr12	+	8598	21	FSM	ENSG00000189079.17	ENST00000334344.11	8598	21	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	20.7663188841932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTGGATAAGTGAC	0	True	NA	16	True	AATAAA	-17	NA	45729705	45908037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417_45811552_45817669_45817889_45821419_45821488_45836588_45836656_45836740_45836992_45837320_45837418_45837497_45837708_45839328_45839497_45846855_45846938_45848835_45848971_45849579_45849777_45850035_45852897_45860800_45860950_45891779_45891919_45892010_45892097_45893419_45893544_45893629_45893722_45904933
transcript_21539.nic	chr12	+	2479	4	ISM	ENSG00000189079.17	ENST00000422737.6	5481	20	-219	80446	-9	-28762	5prime_fragment	FALSE	canonical	3	80	junction_3	7.58653778449403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCACCAAAATGAAATTAT	-9	True	NA	NA	False	NA	NA	NA	45729696	45813472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417
transcript_2154.known	chr1	-	721	6	FSM	ENSG00000160055.20	ENST00000344461.7	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.3597520645281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	7	True	NA	-2	True	AATAAA	-16	NA	32222338	32216199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_21540.nic	chr12	+	3130	3	ISM	ENSG00000189079.17	ENST00000427628.5	323	4	-176	21985	-9	-21985	5prime_fragment	FALSE	canonical	3	82	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTAAAAAAAAGTA	-9	True	NA	NA	False	AATATA	-26	NA	45729696	45734020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_45729929_45730043_45730138_45731216
transcript_21543.nic	chr12	-	3308	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-80	7585	-70	0	5prime_fragment	FALSE	canonical	3	228	junction_1	43.6605084716154	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGAAAAGAAAAAAATGA	1403	False	NA	15	True	AATGAA	-4	NA	45990654	45926715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_21545.nic	chr12	-	2908	5	NIC	ENSG00000139218.18	novel	1336	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	156.539132487695	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	1450	False	NA	-9	True	AATAAA	-20	NA	45990607	45960454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_45961323_45961699_45961858_45964106_45964189_45974189_45975735_45990352
transcript_21546.known	chr12	-	1336	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	149.760549619124	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-13	True	NA	-9	True	AATAAA	-20	NA	45990580	45960454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
transcript_21547.nic	chr12	-	320	2	ISM	ENSG00000139218.18	ENST00000474828.1	757	3	-78	2764	-70	-2764	5prime_fragment	FALSE	canonical	3	334	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAAGAAGAAAACTGT	1403	False	NA	NA	False	CATAAA	-45	NA	45990654	45964170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_45964189_45990352
transcript_21548.known	chr12	-	7552	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	0	0	0	multi-exon	FALSE	canonical	2	107	junction_2	69.3641676595491	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	-7	True	NA	30	True	AATAAA	-18	NA	45990574	45919130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_2155.known	chr1	+	1482	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_6	148.507222254436	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	16	False	NA	31	True	AATAAA	-32	NA	32222436	32231602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_21553.known	chr12	-	3436	18	FSM	ENSG00000111371.16	ENST00000439706.5	3436	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	249.915224380514	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	23	True	NA	6	True	NA	NA	NA	46268997	46187800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46254813_46254937_46268525
transcript_21556.nic	chr12	-	3366	17	NIC	ENSG00000111371.16	novel	3436	18	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	194.66088301197	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	2299	False	NA	6	True	NA	NA	NA	46267749	46187800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46267224
transcript_21557.nnic	chr12	-	2915	17	NNC	ENSG00000111371.16	novel	3436	18	NA	NA	278	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	193.261480900877	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	-2	True	NA	6	True	NA	NA	NA	46268528	46187800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268454
transcript_21558.known	chr12	-	8097	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_16	128.819095537114	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGTGTTTGT	1005	False	46269065	-11	True	ATTAAA	-19	NA	46269043	46183062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
transcript_2156.known	chr1	+	858	9	FSM	ENSG00000084623.12	ENST00000355082.10	858	9	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	240.306444982235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTTTGT	12	False	NA	NA	False	ATTAAA	-16	NA	32222432	32229254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134
transcript_21572.known	chr12	-	3196	16	FSM	ENSG00000111371.16	ENST00000549049.5	3196	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	200.648238356472	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	25	True	NA	6	True	NA	NA	NA	46268995	46187800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46268525
transcript_21573.known	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	TRUE	canonical	3	903	junction_13	74.507151036364	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	1	True	NA	-11	True	AATAAA	-18	NA	46372773	46358187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
transcript_21578.known	chr12	-	4384	15	FSM	ENSG00000134294.14	ENST00000549258.5	4384	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	270.201408250231	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGTACAAATTCAGA	3	True	NA	-12	True	AATAAA	-22	NA	46372771	46358480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370775_46370858_46371177_46371380_46372508
transcript_2158.known	chr1	+	2099	13	FSM	ENSG00000182866.17	ENST00000619559.4	2099	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	12.8376616077678	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	NA	False	NA	17	True	AATAAA	-21	NA	32274110	32286164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_21587.nnic	chr12	-	4006	17	NIC	ENSG00000139209.16	novel	3983	17	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	17.3056168627414	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-8	True	NA	-4	True	AATAAA	-18	NA	46832444	46764760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46803602_46803795_46832326
transcript_21589.nnic	chr12	-	3792	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	8.41321711488668	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	14	False	NA	-4	True	AATAAA	-18	NA	46832422	46764760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
transcript_21592.known	chr12	+	476	3	FSM	ENSG00000179715.13	ENST00000551777.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTGGTGGACGGAGGC	1	True	NA	NA	False	NA	NA	NA	47223544	47235238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47223673_47223923_47224040_47235006
transcript_21593.known	chr12	+	732	2	FSM	ENSG00000179715.13	ENST00000549630.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGAAGTCACCGGGG	2138	False	NA	NA	False	NA	NA	NA	47223500	47235566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47223673_47235006
transcript_21597.known	chr12	-	4339	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_11	27.4214075814864	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCGTATACAACCTATTG	-14	True	NA	NA	False	AATAAA	-21	NA	47706030	47661248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_21599.known	chr12	-	2149	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	83.6116950883999	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATTTGTAAGGATCAG	9009	False	NA	-15	True	AATAAA	-15	NA	47705986	47663292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_21608.nic	chr12	-	891	4	Fusion	ENSG00000276390.1_ENSG00000005175.10	novel	420	3	NA	NA	-27	-279	multi-exon	FALSE	canonical	2	17	junction_1	180.544238961597	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTGTCTTTTGGTG	8938	False	NA	-4	True	AATAAA	-16	NA	47706057	47699679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_2161.nic	chr1	+	2004	12	NIC	ENSG00000182866.17	novel	2099	13	NA	NA	-57	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_7	49.6093832766636	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTTGCTGTCCACTC	NA	False	NA	18	True	AATAAA	-22	NA	32274053	32286165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_21611.known	chr12	-	621	3	FSM	ENSG00000005175.10	ENST00000551293.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTTATCCAGTGTG	17	True	NA	NA	False	NA	NA	NA	47705999	47701190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_47701605_47702687_47702847_47705951
transcript_21615.known	chr12	+	848	4	FSM	ENSG00000257433.7	ENST00000667854.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTTTATCATTTTAC	0	True	NA	NA	False	ACTAAA	-2	NA	47706084	47720447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47706168_47719151_47719273_47719604_47719700_47719898
transcript_21616.known	chr12	+	776	8	FSM	ENSG00000134291.12	ENST00000550552.5	776	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	68.5103894996062	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGTAGAAGAGAGCACAG	23	True	NA	NA	False	NA	NA	NA	47963608	47968256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_21618.known	chr12	+	810	8	FSM	ENSG00000134291.12	ENST00000552561.5	810	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	66.6844534095513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCTATTGGTTCTTCC	19	True	NA	NA	False	NA	NA	NA	47963604	47968229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_21620.known	chr12	+	1414	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	83.8246469039472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	4	True	NA	-22	True	NA	NA	NA	47963634	47968849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_21622.known	chr12	+	1539	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	82.4697842007753	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	10	True	NA	7	True	AATAAA	-17	NA	47963595	47968878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_21631.known	chr12	+	321	3	FSM	ENSG00000134291.12	ENST00000549288.5	321	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	68.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGGAGGAAATTCCACA	10	True	NA	NA	False	NA	NA	NA	47963595	47968200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_47963634_47964208_47964424_47968132
transcript_21633.known	chr12	-	747	2	FSM	ENSG00000139219.19	ENST00000490609.2	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCTTCCAAGACAC	NA	False	NA	NA	False	NA	NA	NA	48004554	47999696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48000126_48004236
transcript_21634.known	chr12	+	3090	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.072150108103	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	15	True	NA	4	True	AATAAA	-15	NA	48119363	48146404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_21639.known	chr12	+	3063	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.962325388254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	-6	True	NA	9	True	AATAAA	-19	NA	48119342	48146104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_21643.known	chr12	-	4679	18	FSM	ENSG00000079387.14	ENST00000448372.5	4679	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	37.2235368483669	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGCCCAAAGGCATG	501	False	NA	NA	False	AAAAAG	-12	NA	48105808	48042973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48105456
transcript_21659.known	chr12	-	657	5	FSM	ENSG00000177981.11	ENST00000535055.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.1365674663566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTACAACAATGATACACC	0	True	NA	NA	False	NA	NA	NA	48157591	48149791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48149999_48150086_48150141_48151200_48151306_48153367_48153526_48157458
transcript_21660.known	chr12	-	2610	4	FSM	ENSG00000177981.11	ENST00000536549.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.3666251038423	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-4	True	NA	0	True	AATAAA	-16	NA	48157595	48147788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48149999_48151200_48151306_48153367_48153526_48157458
transcript_21663.known	chr12	+	2283	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGACTGGTACTAAGG	6	True	NA	15	True	AATAAA	-19	NA	48183643	48185926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48183600_48185900
transcript_21664.known	chr12	-	7227	6	FSM	ENSG00000167528.13	ENST00000547026.6	7227	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3.2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTCTCTAGGTCT	-15	True	NA	-3	True	AATAAA	-20	NA	48350919	48337179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48343728_48344598_48344713_48345344_48345475_48347251_48347344_48347906_48348116_48350785
transcript_21680.nic	chr12	-	2404	11	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	97.3992299764223	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-13	True	NA	-1	True	AAGAAA	-40	NA	48682252	48653401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48681857_48682066_48682186
transcript_21684.known	chr12	-	2373	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	76.1997051288809	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTCTTTTTACCC	1	True	NA	68	True	ATTAAA	-17	NA	48682238	48653210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_21687.nic	chr12	-	2112	10	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	88.2232017857736	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	NA	False	NA	-1	True	AAGAAA	-40	NA	48682270	48653401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_21693.nic	chr12	-	2099	9	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	90.5300364519975	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	NA	False	NA	-1	True	AAGAAA	-40	NA	48682270	48653401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679654_48679834_48681381_48681642_48682186
transcript_21695.nic	chr12	-	1997	9	NIC	ENSG00000139620.13	novel	1881	9	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	96.4753044825462	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	NA	False	NA	-1	True	AAGAAA	-40	NA	48682270	48653401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679654_48679834_48681381_48681642_48682186
transcript_21698.known	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	5.63332716962187	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	22	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_21699.known	chr12	-	6915	8	FSM	ENSG00000129315.11	ENST00000618666.4	6915	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.01019665507731	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	68	False	NA	0	True	AATAAA	-21	NA	48716998	48688457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_21702.known	chr12	+	1872	13	FSM	ENSG00000167535.8	ENST00000536187.6	1872	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	17.4944435623302	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTTCCCACCAGACTC	-4	True	NA	NA	False	NA	NA	NA	48815586	48828219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48815729_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_21703.known	chr12	-	3256	17	FSM	ENSG00000174243.10	ENST00000308025.8	3256	17	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	17.8289397819949	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAGTTCTAGTTAAACT	-1	True	NA	-5	True	AATAAA	-23	NA	48852163	48829755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48830693_48831141_48831317_48832077_48832187_48832421_48832574_48833276_48833520_48834319_48834498_48836120_48836267_48836568_48836795_48836893_48837038_48837280_48837394_48837523_48837658_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_21707.known	chr12	-	1083	6	FSM	ENSG00000174243.10	ENST00000551098.5	1083	6	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	13.4372616257927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTAAGGTGCAGGCCTT	3	True	NA	NA	False	NA	NA	NA	48852138	48837532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_21708.known	chr12	-	1653	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	7.08431365765238	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCGTATTTTTTTC	-2	True	NA	-11	True	TATAAA	-4	NA	48865870	48857144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
transcript_21709.nic	chr12	-	1862	3	ISM	ENSG00000172602.11	ENST00000649147.1	1989	4	0	2882	0	462	5prime_fragment	FALSE	canonical	3	123	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATAGCTGGGTG	-2	True	NA	NA	False	NA	NA	NA	48865870	48860567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_48862119_48864782_48864871_48865647
transcript_21717.known	chr12	-	959	6	FSM	ENSG00000134285.11	ENST00000453172.2	959	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	166.599639855553	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCTGGAGTGCAATAG	-16	True	NA	NA	False	NA	NA	NA	48925520	48923125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48923605_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_21718.known	chr12	-	691	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	39.8768103037342	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGCATTCTTCATCT	12	True	NA	-16	True	AATAAA	-18	NA	48925492	48921962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_2172.known	chr1	+	2118	14	FSM	ENSG00000116478.12	ENST00000373548.8	2118	14	0	0	0	0	multi-exon	TRUE	canonical	3	1052	junction_6	72.876567446884	1095	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	-7	True	NA	25	True	AATAAA	-17	NA	32292082	32333626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32329067_32329161_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_21725.known	chr12	-	939	5	FSM	ENSG00000272822.2	ENST00000398092.4	939	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	370.497891357022	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCAAAGCCATCGTGGAAAA	160	False	NA	NA	False	NA	NA	NA	48957365	48903502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48903909_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_21729.known	chr12	-	630	5	FSM	ENSG00000134285.11	ENST00000444214.6	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	188.741224961586	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-2	True	NA	-12	True	AATAAA	-22	NA	48924967	48921958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48924773
transcript_21735.known	chr12	-	4041	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_1	25.8891869319992	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGTGTAATGACCTTA	-15	True	NA	-36	True	AATAAA	-18	NA	48957487	48935722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_21737.known	chr12	-	2661	4	FSM	ENSG00000134285.11	ENST00000551694.5	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_2	23.2139804619735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATTCTTCATCTGA	-6	True	NA	-14	True	AATAAA	-20	NA	48925510	48921960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48924257_48924560_48924649_48925045_48925112_48925299
transcript_21741.known	chr12	-	1089	4	FSM	ENSG00000134287.10	ENST00000447318.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	361.499654218369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGCCACCCTCT	-5	True	NA	-57	True	NA	NA	NA	48957477	48938553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48939109_48939654_48939780_48940947_48941189_48957309
transcript_21744.nnic	chr12	-	2745	2	NNC	ENSG00000134287.10	novel	563	2	NA	NA	-40	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGAGCCGACCTTCAT	-2	True	NA	-11	True	ATTAAA	-14	NA	48957527	48936208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_48938848_48957421
transcript_21745.known	chr12	-	807	6	FSM	ENSG00000134287.10	ENST00000541959.5	807	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	416.53215962276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCACCCACCCCTGACA	80	False	NA	NA	False	AAAACA	-31	NA	48957445	48938924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48941567_48941578_48957309
transcript_21746.known	chr12	+	1792	8	FSM	ENSG00000139537.11	ENST00000320516.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.59078981795143	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTTATATCTTTTC	-12	True	NA	NA	False	ATTAAA	-18	NA	48904132	48921576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_48904469_48904945_48905114_48914403_48914574_48916969_48917109_48918274_48918473_48918684_48918904_48920929_48921083_48921167
transcript_21753.known	chr12	-	1657	12	FSM	ENSG00000181929.13	ENST00000548065.7	1657	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_11	35.1570267361394	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAGTGTTTGATTTTT	1	True	NA	-26	True	ATTAAA	-21	NA	49018776	49002273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_21757.known	chr12	-	1679	12	FSM	ENSG00000181929.13	ENST00000546531.5	1679	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	102.861296321754	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAAATCTAATTAAATG	-10	True	NA	-64	True	NA	NA	NA	49018787	49002311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005593_49005742_49005853_49013061_49013111_49018731
transcript_21758.known	chr12	-	1683	12	FSM	ENSG00000181929.13	ENST00000316299.9	1683	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	104.167220935164	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	-2	True	NA	-30	True	ATTAAA	-17	NA	49018779	49002277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005392_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_21760.known	chr12	-	1531	11	FSM	ENSG00000181929.13	ENST00000547306.5	1531	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	105.136863183186	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	13	True	NA	-30	True	ATTAAA	-17	NA	49018764	49002277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49013061_49013111_49018731
transcript_21769.known	chr12	-	553	2	FSM	ENSG00000181929.13	ENST00000552657.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAGCTCAGGAGTTTG	-9	True	NA	NA	False	NA	NA	NA	49018786	49012612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49013111_49018731
transcript_21770.nnic	chr12	-	1366	8	NNC	ENSG00000167550.11	novel	1173	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.6192982442255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	NA	False	NA	-14	True	AATAAA	-13	NA	49070034	49064685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069585
transcript_21771.known	chr12	-	1173	8	FSM	ENSG00000167550.11	ENST00000301068.11	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	7.77226886213454	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-1	True	NA	-4	True	AATAAA	-23	NA	49069979	49064675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069733
transcript_21772.known	chr12	-	1261	8	FSM	ENSG00000167550.11	ENST00000550797.1	1261	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	20.976176963403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGAAATCTTTTGT	NA	False	NA	-30	True	AATAGA	-36	NA	49070025	49064701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069175_49069733
transcript_21775.known	chr12	-	1063	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	22.1785682335197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	31	False	NA	-14	True	AATAAA	-13	NA	49069947	49064685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
transcript_21778.known	chr12	-	2235	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	17.7833094150105	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACCTGTCTCTGTGTA	-2	True	NA	-7	True	AATAAA	-30	NA	49110850	49097141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_21779.known	chr12	-	2295	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	12.677335830134	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	1	True	NA	-4	True	AATAAA	-33	NA	49110847	49097138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_21794.known	chr12	-	1777	5	FSM	ENSG00000167552.15	ENST00000550767.6	1777	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1534.13010774836	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	7	True	NA	7	True	AATGAA	-25	NA	49189066	49184770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49186989_49187085_49188976
transcript_21798.known	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_3	1164.84772490752	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	299	False	NA	NA	False	NA	NA	NA	49188899	49184958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
transcript_21799.known	chr12	-	1782	4	FSM	ENSG00000167552.15	ENST00000552924.2	1782	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1460.49649092355	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-5	True	NA	7	True	AATGAA	-25	NA	49189078	49184770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188888
transcript_21800.known	chr12	-	1627	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	8406	junction_1	791.097128465694	30070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTCCTGCGTTTTT	-1	True	NA	-23	True	AGTAAA	-17	NA	49131395	49127781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
transcript_21801.known	chr12	-	3198	3	FSM	ENSG00000123416.15	ENST00000332858.10	3198	3	0	0	0	0	multi-exon	FALSE	canonical	3	8406	junction_1	520	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTGTTTCCTGCGT	-1	True	NA	-27	True	AGTAAA	-13	NA	49131395	49127785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49128939_49129241_49129391_49129499
transcript_21802.known	chr12	-	1802	4	FSM	ENSG00000167552.15	ENST00000679733.1	1802	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1600.02090264124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATTTAAAGTATCTTA	-5	True	NA	92	True	AATAAA	-45	NA	49189078	49184685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186587_49186834_49188976
transcript_21803.known	chr12	-	1672	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	0	0	0	multi-exon	FALSE	canonical	3	2716	junction_1	447.904007573051	7386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTGTGTTTTCTAT	-7	True	NA	-17	True	AATAAA	-22	NA	49189080	49184794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
transcript_21804.known	chr12	+	2823	4	FSM	ENSG00000167553.17	ENST00000301072.11	2823	4	0	0	0	0	multi-exon	FALSE	canonical	3	752	junction_2	185.387881660767	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCTTGGAATCCTGAT	0	True	NA	23	True	AATAAA	-16	NA	49265081	49274600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49265185_49269464_49269688_49269827_49269977_49272252
transcript_21808.known	chr12	+	2551	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	74.4740743823113	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	-13	True	NA	13	True	AATAAA	-13	NA	49323254	49331731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
transcript_21809.known	chr12	+	2771	14	FSM	ENSG00000135451.13	ENST00000551245.5	2771	14	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	74.8725939542887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	-24	True	NA	-48	True	NA	NA	NA	49323243	49331670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49331408_49331572
transcript_21819.known	chr12	+	675	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	156.034896381831	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	-13	True	NA	28	True	AATAAA	-40	NA	49323254	49324392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
transcript_21820.nnic	chr12	+	659	4	NIC	ENSG00000135451.13	novel	675	4	NA	NA	-37	-3	combination_of_known_splicesites	FALSE	canonical	3	62	junction_3	141.916250733389	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGAAGCCTTTTCC	NA	False	NA	13	True	AATAAA	-25	NA	49323198	49324377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49324211
transcript_21821.known	chr12	+	623	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	132.03619032506	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	-13	True	NA	52	True	AATAAA	-45	NA	49323254	49324416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
transcript_21823.known	chr12	+	778	3	FSM	ENSG00000135451.13	ENST00000550709.5	778	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCCTTTTCCAGT	-11	True	NA	16	True	AATAAA	-28	NA	49323256	49324380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49323844
transcript_21824.nnic	chr12	+	375	3	NIC	ENSG00000135451.13	novel	623	4	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGAAGCCTTTTCC	3	True	NA	13	True	AATAAA	-25	NA	49323270	49324377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_49323350_49323603_49323753_49324230
transcript_21825.known	chr12	+	839	2	FSM	ENSG00000135451.13	ENST00000549534.1	839	2	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATATCACTTCTTCT	5	True	NA	1	True	AATAAA	-13	NA	49323272	49324365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603
transcript_21826.known	chr12	+	348	3	FSM	ENSG00000135451.13	ENST00000549275.5	348	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	184.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTGGAGACCAGCCTG	NA	False	NA	-68	True	NA	NA	NA	49323235	49324296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49323350_49323603_49323753_49324211
transcript_21828.known	chr12	+	3320	15	FSM	ENSG00000123352.18	ENST00000553127.5	3320	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	86.6779165906161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTTTCATAGCAGCA	6	True	NA	17	True	AATAAA	-26	NA	49367464	49527424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49371227_49371291_49387053_49387138_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_21829.known	chr12	+	2781	15	FSM	ENSG00000123352.18	ENST00000549412.5	2781	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	87.4548279900859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCATTCTAAGTA	2	True	NA	19	True	AAAAAG	-18	NA	49366904	49526365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49512861_49512906_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_2183.known	chr1	-	1546	2	FSM	ENSG00000175130.7	ENST00000329421.8	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	16072	junction_1	0	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-1	True	NA	-12	True	AATAAA	-14	NA	32336233	32333838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32335098_32335946
transcript_21831.known	chr12	+	3240	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	44.1612162168512	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	3	True	NA	18	True	AATAAA	-27	NA	49367461	49527425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_21836.known	chr12	+	3158	13	FSM	ENSG00000123352.18	ENST00000321898.10	3158	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	26.840061268352	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	16	True	NA	12	True	AATAAA	-21	NA	49367474	49527419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_21838.nic	chr12	+	1888	8	ISM	ENSG00000123352.18	ENST00000321898.10	3158	13	-107	26628	-16	3902	5prime_fragment	FALSE	canonical	3	172	junction_1	33.0083477382338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTCCTTTTAAACTAA	-6	True	NA	NA	False	AAAAAG	-13	NA	49367367	49500791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069
transcript_2184.nnic	chr1	-	1322	2	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	403	junction_1	0	1461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-2	True	NA	-12	True	AATAAA	-14	NA	32336234	32333838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_32335098_32336171
transcript_21843.known	chr12	+	1061	5	FSM	ENSG00000123352.18	ENST00000549375.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	39.1942278913618	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCGACCTTGAAACATA	3	True	NA	NA	False	NA	NA	NA	49367461	49491159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_21847.known	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	201.1618474982	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	24	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
transcript_2185.nnic	chr1	-	1086	2	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	-1	-236	at_least_one_novel_splicesite	FALSE	canonical	3	403	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGAATCAACTGTGTC	-2	True	NA	-22	True	TATAAA	-26	NA	32336234	32334074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_32335098_32336171
transcript_21850.nic	chr12	-	2082	15	ISM	ENSG00000187778.14	ENST00000550165.5	1936	16	213	-61	-15	0	3prime_fragment	FALSE	canonical	3	55	junction_14	149.921697249339	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	237	False	NA	-7	True	AATAAA	-18	NA	49567888	49558301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646
transcript_21853.known	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_5	47.6864760702655	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-17	True	NA	-4	True	AATAAA	-21	NA	49568142	49558298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
transcript_21859.nic	chr12	-	1827	14	NIC	ENSG00000187778.14	novel	1938	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	159.64390848007	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	49568154	49558301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49568047
transcript_21863.known	chr12	-	1666	13	FSM	ENSG00000187778.14	ENST00000548602.5	1666	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	174.896378051564	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTATTTTATTTTTTTT	-6	True	NA	-6	True	AATAAA	-19	NA	49568131	49558300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49568047
transcript_21866.known	chr12	+	3182	26	FSM	ENSG00000110844.14	ENST00000548825.7	3182	26	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_2	21.3468124084136	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	0	True	NA	9	True	TTTAAA	-20	NA	49623560	49644665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_2187.known	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_10	33.6881284728018	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-7	True	NA	NA	False	NA	NA	NA	32394441	32364632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_21871.known	chr12	+	2771	11	FSM	ENSG00000139644.13	ENST00000549385.5	2771	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1223.24422745419	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACACCTA	2	False	NA	77	True	ATTAAA	-14	NA	49741573	49764726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49741612_49741956_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_21874.known	chr12	+	2837	10	FSM	ENSG00000139644.13	ENST00000267115.10	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	2715	junction_1	225.804460365573	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	0	True	NA	20	True	AATAAA	-19	NA	49741556	49764934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49741612_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_2188.known	chr1	-	1505	11	FSM	ENSG00000160058.19	ENST00000446293.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	76.2816491693776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTCTTGGGCCTCTGCT	4	True	NA	NA	False	NA	NA	NA	32394430	32366476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_21883.known	chr12	+	3254	10	FSM	ENSG00000139644.13	ENST00000423828.5	3254	10	0	0	0	0	multi-exon	FALSE	canonical	1	43	junction_1	983.355906834434	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	-4	True	NA	20	True	AATAAA	-19	NA	49741808	49764934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49742281_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_21889.known	chr12	+	2494	8	FSM	ENSG00000139644.13	ENST00000547798.1	2494	8	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_5	144.130326511835	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAACAC	2328	False	NA	74	True	ATTAAA	-11	NA	49752963	49764723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_21890.known	chr12	-	4882	13	FSM	ENSG00000167566.17	ENST00000335999.7	4882	13	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_11	8.58292879305582	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCCTGAGTCGGCT	-1	True	NA	-14	True	AATAAA	-15	NA	49828413	49791151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
transcript_21891.known	chr12	-	3226	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTGTGGTGATTTC	-1	True	NA	-2	True	AATAAA	-17	NA	49843106	49836042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49839016_49842853
transcript_21893.known	chr12	-	4667	12	FSM	ENSG00000135472.9	ENST00000320634.8	4667	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	2.18560277821297	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTCCCTCGTCTGCCG	-19	True	NA	NA	False	AATAAA	-19	NA	49903900	49866895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49870654_49887385_49887440_49889106_49889203_49889480_49889569_49890116_49890155_49890682_49890723_49891063_49891115_49897030_49897085_49897518_49897584_49897986_49898091_49901129_49901326_49903777
transcript_21898.known	chr12	-	3080	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_16	45.9127909737581	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	48	True	NA	NA	False	AGTAAA	-17	NA	50025400	49989163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_21899.nnic	chr12	-	3080	17	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_16	57.6709076896662	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	5	True	NA	NA	False	AGTAAA	-19	NA	50025443	49989161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025372
transcript_21900.known	chr12	-	3106	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_16	39.720458755533	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-46	True	NA	NA	False	AGTAAA	-19	NA	50025494	49989161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
transcript_21910.nnic	chr12	-	2998	16	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	67.849637680192	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-47	True	NA	NA	False	AGTAAA	-19	NA	50025495	49989161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_49990344_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
transcript_21915.known	chr12	+	3283	13	FSM	ENSG00000066117.15	ENST00000394963.9	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_4	49.4449750283642	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	-3	True	NA	78	True	NA	NA	NA	50085341	50100707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_21916.known	chr12	+	2887	8	FSM	ENSG00000167588.13	ENST00000301149.8	2887	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	1.95875845725744	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGAGTTGGGAGAGGG	-3	True	NA	NA	False	AATAAA	-19	NA	50104007	50111313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50104092_50104573_50104752_50105547_50105689_50106287_50106427_50106804_50106918_50107566_50107801_50108023_50108131_50109422
transcript_21921.known	chr12	-	2132	11	FSM	ENSG00000139624.14	ENST00000547787.5	2132	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	188.98719533344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	41	True	NA	-16	True	ATTAAA	-14	NA	50167303	50129798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
transcript_21928.known	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	40.307460327149	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-25	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_2193.known	chr1	-	1473	10	FSM	ENSG00000160058.19	ENST00000419121.6	1473	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	86.9738147056023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGGATAGTTCTAGCC	-7	True	NA	NA	False	NA	NA	NA	32394441	32366300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32386778_32386896_32394079_32394141_32394403
transcript_21933.nic	chr12	-	1966	9	NIC	ENSG00000139624.14	novel	2132	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	158.34910009217	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	-52	True	NA	-16	True	ATTAAA	-14	NA	50167396	50129798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50143073_50143205_50143951_50144058_50167100
transcript_21940.known	chr12	+	677	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	21	True	NA	13	True	ATTAAA	-13	NA	50112236	50120451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50112498_50120035
transcript_21941.known	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	20	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50112302_50120035
transcript_21942.known	chr12	+	698	2	FSM	ENSG00000272368.2	ENST00000548468.2	698	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACACAAGATTTTGAAA	-19	True	NA	NA	False	AATAAA	-21	NA	50112196	50165618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50112302_50165025
transcript_21943.known	chr12	+	580	3	FSM	ENSG00000178449.9	ENST00000550654.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTTTTTTGTTTAC	-12	True	NA	19	True	ATTAAA	-19	NA	50112203	50120457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50112302_50118492_50118553_50120035
transcript_21944.known	chr12	-	3669	11	FSM	ENSG00000050405.14	ENST00000394943.7	3669	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	57.7421856184887	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	0	True	NA	-12	True	AATAAA	-21	NA	50283506	50175787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_21946.known	chr12	-	3612	8	FSM	ENSG00000050405.14	ENST00000552783.5	3612	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	54.79162754454	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCAATGTTTCTCTT	-45	True	NA	-14	True	AATAAA	-19	NA	50222705	50175789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
transcript_21949.known	chr12	-	3706	11	FSM	ENSG00000050405.14	ENST00000341247.9	3680	11	-26	0	-26	0	multi-exon	FALSE	canonical	3	61	junction_9	46.1415214313529	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	NA	False	NA	-12	True	AATAAA	-21	NA	50283546	50175787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_2195.nic	chr1	-	1704	10	ISM	ENSG00000160058.19	ENST00000455895.7	3309	11	-3	3400	-3	0	5prime_fragment	FALSE	canonical	3	192	junction_9	34.9362735545241	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	-10	True	NA	NA	False	AATATA	-39	NA	32394444	32368032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_21950.known	chr12	-	587	3	FSM	ENSG00000050405.14	ENST00000551486.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACTTTTTTTGTGA	2021	False	NA	NA	False	NA	NA	NA	50222165	50204343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50204701_50205983_50206069_50222020
transcript_21952.known	chr12	-	2162	8	FSM	ENSG00000050405.14	ENST00000552909.5	2162	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	58.5954654510788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATACTAGAGATAAC	-6	True	NA	NA	False	AAAACA	-25	NA	50222356	50176884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50178070_50181903_50182035_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
transcript_21954.nic	chr12	+	2716	17	NIC	ENSG00000161813.23	novel	6441	16	NA	NA	5	-249	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	102.521472598427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATACATCCTTCAGTA	-29	True	NA	NA	False	AAGAAA	-6	NA	50400861	50476207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_21957.known	chr12	+	4000	16	FSM	ENSG00000161813.23	ENST00000429001.7	4000	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	91.9068127084289	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTACATTACTGTGAAA	-34	True	NA	NA	False	ATTAAA	-20	NA	50400856	50477517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428916_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_21958.known	chr12	+	2853	16	FSM	ENSG00000161813.23	ENST00000518444.5	2853	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	93.7016542009798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTAGATTTTTTTT	38	True	NA	16	True	AGTAAA	-22	NA	50400928	50476463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427764_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_2196.known	chr1	-	4599	10	FSM	ENSG00000160058.19	ENST00000341071.11	4599	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	80.4051469392413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCCTGAACCTTT	8	True	NA	-12	True	ATTAAA	-15	NA	32394426	32365170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_21968.nnic	chr12	+	2833	16	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_1	89.2157435035369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTAGATTTTTTTT	0	True	NA	16	True	AGTAAA	-22	NA	50401402	50476463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_2197.nic	chr1	-	1934	9	ISM	ENSG00000160058.19	ENST00000444377.5	2925	12	-16	10401	-3	1116	5prime_fragment	FALSE	canonical	3	192	junction_8	34.7776418838311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTCAGTCAGCCTT	-10	True	NA	-7	True	ATTAAA	-13	NA	32394444	32375513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_21971.known	chr12	+	3621	15	FSM	ENSG00000161813.23	ENST00000347328.9	3621	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	94.3828503965609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATGTAAATGGTGGTT	24	False	NA	NA	False	AGTAAA	-20	NA	50400984	50477497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_2198.nnic	chr1	+	587	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-23	-11235	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	23.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTAGTGCTCGTTCTGT	-16	True	NA	15	True	AATAAA	-27	NA	32465048	32485451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_21980.nic	chr12	+	1693	13	ISM	ENSG00000161813.23	ENST00000398473.7	6441	16	-28	12890	0	5627	5prime_fragment	FALSE	canonical	3	233	junction_1	64.2085902006543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTAAACACCCAGCA	-34	True	NA	NA	False	NA	NA	NA	50400856	50467114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958
transcript_21982.nic	chr12	+	1480	12	ISM	ENSG00000161813.23	ENST00000347328.9	3621	15	-128	10383	0	5627	5prime_fragment	FALSE	canonical	3	78	junction_8	103.215092752469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTAAACACCCAGCA	-34	True	NA	NA	False	NA	NA	NA	50400856	50467114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958
transcript_21984.nnic	chr12	+	1536	12	NNC	ENSG00000161813.23	novel	1578	12	NA	NA	5	1156	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_11	147.946215377846	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	-29	True	NA	5	True	AATAAA	-17	NA	50400861	50456118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455901
transcript_21992.nnic	chr12	+	1672	11	NNC	ENSG00000161813.23	novel	1577	11	NA	NA	0	1156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	165.964122628959	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	-34	True	NA	5	True	AATAAA	-17	NA	50400856	50456118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441596_50441597_50441644_50454313_50454418_50455506
transcript_21993.nnic	chr12	+	1887	11	NNC	ENSG00000161813.23	novel	1577	11	NA	NA	0	1156	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	119.706140193392	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	-34	True	NA	5	True	AATAAA	-17	NA	50400856	50456118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
transcript_21994.known	chr12	+	1577	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	69.758225321463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	17	True	NA	6	True	AATAAA	-17	NA	50400907	50461487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_22.known	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00060_+_0_500
transcript_2200.nnic	chr1	+	1016	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-23	-10806	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	23.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAGAAACCTTCATTG	-16	True	NA	NA	False	ATTAAA	-16	NA	32465048	32485880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_22002.known	chr12	+	6296	15	FSM	ENSG00000161813.23	ENST00000293618.12	6296	15	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_10	105.536457575338	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCAGGACTGGTTTCC	NA	False	NA	1	True	AATAAA	-7	NA	50400808	50479996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_22009.known	chr12	+	586	5	FSM	ENSG00000161813.23	ENST00000551886.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	164.812772563294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	41	True	NA	NA	False	AATAAA	-20	NA	50400931	50435599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430497_50430571_50435487
transcript_22013.nnic	chr12	+	2468	7	NNC	ENSG00000123268.9	novel	2412	7	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_2	68.4535527850008	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	-26	True	NA	43	True	AATATA	-23	NA	50764055	50821162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50764308_50780139_50780239_50795897_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
transcript_22014.known	chr12	+	2412	7	FSM	ENSG00000123268.9	ENST00000262053.8	2412	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	14.0356688476182	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	19	True	NA	43	True	AATATA	-23	NA	50764100	50821162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
transcript_22021.nnic	chr12	+	2120	3	NNC	ENSG00000185432.12	novel	3117	2	NA	NA	-328	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTATATCTTTGCTG	-8	True	NA	14	True	AATAAA	-26	NA	50924654	50932508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_50925537_50929913_50930221_50931577
transcript_22022.known	chr12	+	3117	2	FSM	ENSG00000185432.12	ENST00000332160.5	3117	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTATATCTTTGCTG	-6	True	NA	14	True	AATAAA	-26	NA	50925014	50932508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_50925537_50929913
transcript_22026.nic	chr12	-	2166	18	NIC	ENSG00000110911.17	novel	2125	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	101.347529813548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	1930	False	NA	-37	True	ATTAAA	-29	NA	51026404	50979819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_22027.known	chr12	-	2125	18	FSM	ENSG00000110911.17	ENST00000546636.5	2125	18	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	101.646718409016	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	3	True	NA	-37	True	ATTAAA	-29	NA	51026368	50979819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_22028.known	chr12	-	2486	17	FSM	ENSG00000110911.17	ENST00000547198.5	2486	17	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	83.8221470958004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAAAGAGCTTTAATAT	-5	True	NA	-18	True	ATTAAA	-15	NA	51026338	50981008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_22031.known	chr12	-	3762	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	83.3906235361626	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	-13	True	NA	-1	True	AATAAA	-18	NA	51026384	50979783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_22035.known	chr12	-	3753	17	FSM	ENSG00000110911.17	ENST00000547688.7	3753	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	100.798065457627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	1	True	NA	-1	True	AATAAA	-18	NA	51028242	50979783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51028176
transcript_22040.known	chr12	-	4132	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	0	0	0	multi-exon	FALSE	canonical	1	95	junction_8	70.514490236641	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-13	True	NA	0	True	ATTAAA	-20	NA	51026384	50985991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_22041.nic	chr12	-	4145	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-64	4983	-2	0	5prime_fragment	FALSE	canonical	1	95	junction_8	71.1044927475676	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	1932	False	NA	0	True	ATTAAA	-20	NA	51026402	50985991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_22044.known	chr12	-	4123	16	FSM	ENSG00000110911.17	ENST00000394904.9	4123	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	92.720847470003	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	1	True	NA	0	True	ATTAAA	-20	NA	51028242	50985991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51028176
transcript_22046.nic	chr12	-	2191	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-64	6937	-2	0	5prime_fragment	FALSE	canonical	1	95	junction_8	71.1044927475676	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAATGAGTATGCAAGT	1932	False	NA	NA	False	AATACA	-18	NA	51026402	50987945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_22051.known	chr12	+	2106	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8116941111872	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	-6	True	NA	28	True	AGTAAA	-30	NA	51048326	51060424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_22053.known	chr12	+	2123	9	FSM	ENSG00000050426.16	ENST00000418425.6	2123	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.9363114959724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAATGACTTATGCAT	5	True	NA	17	True	AGTAAA	-19	NA	51048337	51060413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51052091_51052247_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_22055.known	chr12	+	1389	9	FSM	ENSG00000050426.16	ENST00000550929.5	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	28.2043325572508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTACTTACATCTGTG	NA	False	NA	NA	False	NA	NA	NA	51048317	51059805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048372_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_22060.known	chr12	+	2001	8	FSM	ENSG00000050426.16	ENST00000547318.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.6643656295021	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGGAAATGACTTAT	NA	False	NA	13	True	AGTAAA	-15	NA	51048300	51060409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_22061.nic	chr12	+	1959	8	NIC	ENSG00000050426.16	novel	2106	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	23.265109200742	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	-12	True	NA	25	True	AGTAAA	-27	NA	51048320	51060421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048479_51049033_51049186_51053811_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_22073.known	chr12	+	1665	6	FSM	ENSG00000050426.16	ENST00000547008.5	1665	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	34.3604423720068	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	8	True	NA	-27	True	NA	NA	NA	51048340	51060369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51056349_51056503_51058031_51058129_51059360
transcript_22074.nnic	chr12	+	1704	6	NIC	ENSG00000050426.16	novel	2106	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	35.9577529887506	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	-12	True	NA	25	True	AGTAAA	-27	NA	51048320	51060421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048479_51049033_51049186_51053777_51053861_51056349_51056503_51058031_51058129_51059360
transcript_22081.known	chr12	+	1713	6	FSM	ENSG00000050426.16	ENST00000552739.5	1713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.873089298087	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACCTGTTGATGGAAA	13	False	NA	5	True	AGTAAA	-7	NA	51048345	51060401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_22083.known	chr12	+	1480	5	FSM	ENSG00000050426.16	ENST00000550100.5	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	33.436506994601	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTAGCTTTTGTGTG	11	True	NA	-93	True	NA	NA	NA	51048343	51060303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_22085.nic	chr12	+	1508	5	NIC	ENSG00000050426.16	novel	601	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	40.8679275226919	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	-6	True	NA	25	True	AGTAAA	-27	NA	51048326	51060421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048372_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_22088.nnic	chr12	+	1376	4	NIC	ENSG00000050426.16	novel	850	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	40.8928138212843	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	NA	False	NA	25	True	AGTAAA	-27	NA	51048306	51060421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51048372_51056349_51056503_51058031_51058129_51059360
transcript_22091.known	chr12	+	563	4	FSM	ENSG00000050426.16	ENST00000549686.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	36.7453700787218	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGCAGAGAGAGGAGC	5	True	NA	NA	False	NA	NA	NA	51048337	51059532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51056349_51056503_51058031_51058129_51059360
transcript_22093.known	chr12	+	1566	5	FSM	ENSG00000050426.16	ENST00000380135.7	1566	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	40.1707293934277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAAGCACTGTTTTTA	11	True	NA	-33	True	NA	NA	NA	51048343	51060363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058005_51058129_51059360
transcript_22097.known	chr12	-	3807	15	FSM	ENSG00000135457.11	ENST00000257915.10	3807	15	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_14	24.330316186073	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTAGTGAATGATTA	-30	True	NA	95	True	TTTAAA	-35	NA	51173135	51093655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_2210.known	chr1	-	598	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	336.397953818589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	703	False	NA	-20	True	AATAAA	-17	NA	32650525	32621829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_22101.known	chr12	-	1862	14	FSM	ENSG00000135457.11	ENST00000548115.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	84.5418561647837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCTGCTCCTTCCTTC	193	False	NA	NA	False	NA	NA	NA	51172912	51095221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_22111.known	chr12	+	2064	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.121265174912	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCATTTCATGAAT	-1	True	NA	11	True	AATAAA	-20	NA	51238825	51243933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
transcript_22112.known	chr12	+	1117	4	FSM	ENSG00000183283.16	ENST00000425012.6	1117	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	154.379042907024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCCTTGGAGTTGGCT	-1	True	NA	NA	False	NA	NA	NA	51238825	51246717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51246060
transcript_22117.known	chr12	+	601	4	FSM	ENSG00000183283.16	ENST00000549732.6	601	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.903083316992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGCACTTTTCAAATT	7	False	NA	NA	False	NA	NA	NA	51238853	51242594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240966_51241117_51242329
transcript_22118.known	chr12	+	587	4	FSM	ENSG00000183283.16	ENST00000551313.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	111.086552841567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAATGTAACTGCTTTA	0	True	NA	NA	False	NA	NA	NA	51239294	51242510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51239336_51240342_51240462_51240870_51241117_51242329
transcript_2212.known	chr1	-	1567	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_3	211.074565550239	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-8	True	NA	-3	True	AATAAA	-19	NA	32650550	32620819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_22120.known	chr12	-	610	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	60.4041941148681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGATCTTGATCTTCTT	19	True	NA	NA	False	NA	NA	NA	51269958	51246084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
transcript_22121.known	chr12	-	1875	4	FSM	ENSG00000170545.17	ENST00000603798.6	1875	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	57.2033410057684	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGCCTCTGTTGTCCA	-24	True	NA	2	True	ATTAAA	-25	NA	51270415	51244557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270255
transcript_22123.known	chr12	+	701	3	FSM	ENSG00000183283.16	ENST00000439799.6	701	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAGTTGCCAAATTAT	-1	True	NA	NA	False	AATAAA	-41	NA	51238825	51242816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51242329
transcript_22124.nic	chr12	+	2325	3	NIC	ENSG00000183283.16	novel	2064	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	132.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	-1	True	NA	NA	False	AATAAA	-44	NA	51238825	51243785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51238921_51240342_51241117_51242329
transcript_22125.known	chr12	+	1811	4	FSM	ENSG00000183283.16	ENST00000436900.2	1811	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.922198009623	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	15	False	NA	NA	False	AATAAA	-44	NA	51238902	51243785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240898_51241117_51242329
transcript_22126.known	chr12	+	1045	4	FSM	ENSG00000183283.16	ENST00000604900.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.163155152115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTGGAACCCTTGTGA	-2	True	NA	26	True	AATAAA	-31	NA	51238885	51271362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51270717
transcript_22127.known	chr12	+	598	2	FSM	ENSG00000183283.16	ENST00000549041.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTCTTCTAGCTCTAT	10	False	NA	NA	False	CATAAA	-20	NA	51238836	51240856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51238921_51240342
transcript_22129.known	chr12	+	2262	15	FSM	ENSG00000050438.17	ENST00000535225.6	2262	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	17.9541649991395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	19	True	NA	1	True	AATAAA	-15	NA	51391316	51474575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_51391489_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_2213.known	chr1	-	588	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	380.655027551194	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-8	True	NA	-31	True	AATAAA	-6	NA	32650550	32621840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
transcript_22130.nic	chr12	+	2325	15	ISM	ENSG00000050438.17	ENST00000319957.10	3834	22	-172	23287	-30	0	5prime_fragment	FALSE	canonical	3	59	junction_11	8.09289181684666	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	16	False	NA	1	True	AATAAA	-15	NA	51424800	51474575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_22134.nic	chr12	+	1473	3	NIC	ENSG00000050438.17	novel	4005	21	NA	NA	-30	-1789	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCACAGTT	16	False	NA	NA	False	TATAAA	-43	NA	51424800	51451797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_51425036_51440707_51440790_51450641
transcript_22141.known	chr12	+	2485	7	FSM	ENSG00000123358.20	ENST00000394825.6	2485	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	41.1599184752459	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	-2	True	NA	10	True	AATAAA	-21	NA	52051441	52059503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52051569_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_22143.known	chr12	+	1433	4	FSM	ENSG00000123395.15	ENST00000336854.9	1433	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	71.0039122552804	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	-21	True	NA	22	True	AATAAA	-25	NA	52069977	52077495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785
transcript_22145.known	chr12	+	846	4	FSM	ENSG00000123395.15	ENST00000553049.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	171.930864658508	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCCTTCCAGATCACT	4	True	NA	NA	False	NA	NA	NA	52070002	52077104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52070072_52070353_52070484_52073574_52073903_52076785
transcript_22157.known	chr12	-	2126	9	FSM	ENSG00000170421.13	ENST00000552551.5	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	1326.73497259249	2227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	-10	True	NA	-4	True	AATAAA	-25	NA	52949842	52897186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949455
transcript_22160.known	chr12	+	1420	8	FSM	ENSG00000111057.11	ENST00000388837.6	1420	8	0	0	0	0	multi-exon	FALSE	canonical	1	690	junction_1	2432.89275202528	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATGTCACTTTGTCTT	-5	True	NA	14	True	AATAAA	-14	NA	52948870	52952900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52948939_52949172_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_22167.known	chr12	+	1413	7	FSM	ENSG00000111057.11	ENST00000388835.4	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	2012	junction_3	1748.34376387101	2140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTGTCTTCTTTTG	-1	True	NA	20	True	AATAAA	-20	NA	52949117	52952906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_22178.known	chr12	-	2437	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTACTGCCTTTTACT	6	True	NA	NA	False	AATAAA	-18	NA	52949874	52946613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_52948829_52949455_52949518_52949714
transcript_22180.known	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	52	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	935	False	NA	-13	True	AATACA	-14	NA	52949920	52948650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_52948829_52949455_52949579_52949714
transcript_22198.known	chr12	+	3856	15	FSM	ENSG00000063046.18	ENST00000262056.14	3856	15	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	200.036591040494	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGTTCTTTGACAAA	16	True	NA	5	True	AATAAA	-25	NA	53006455	53042215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034710_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_22201.known	chr12	+	1936	15	FSM	ENSG00000063046.18	ENST00000420463.7	1936	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	366.317728988686	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAACCTCTATCCAG	16	True	NA	-90	True	NA	NA	NA	53006455	53040280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034725_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_22212.known	chr12	+	1985	14	FSM	ENSG00000063046.18	ENST00000416762.7	1985	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	413.470833527003	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTGGTGCGTTATG	17	True	NA	92	True	AATACA	-34	NA	53006456	53040462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034710_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_22214.known	chr12	-	2902	11	FSM	ENSG00000167778.9	ENST00000301463.9	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	6.8381283989115	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATCCTACTCTGA	-11	True	NA	-1	True	AATAGA	-18	NA	53079390	53064315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53065967_53066313_53066487_53066572_53066693_53067647_53067706_53068154_53068305_53073285_53073472_53074648_53074785_53075094_53075220_53075735_53075812_53077114_53077262_53079310
transcript_22224.known	chr12	-	1645	5	FSM	ENSG00000257337.8	ENST00000657514.2	1750	5	92	13	31	0	multi-exon	FALSE	canonical	2	5	junction_1	10.0591997693654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	76	False	NA	-28	True	AAAAAG	-44	NA	53054353	53038985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53053395_53053575_53054320
transcript_22226.known	chr12	-	1563	4	FSM	ENSG00000257337.8	ENST00000662901.2	1591	4	0	28	0	0	multi-exon	FALSE	canonical	1	3	junction_3	13.6950923894494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	-21	True	NA	-28	True	AAAAAG	-44	NA	53054450	53038985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53054320
transcript_22227.known	chr12	-	2863	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.96655480858378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTATTTTTATGTTCC	-9	True	NA	NA	False	CATAAA	-16	NA	53054438	53043188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
transcript_22231.known	chr12	+	947	4	FSM	ENSG00000167779.9	ENST00000301464.4	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	9.46337971105226	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	1	True	NA	26	True	AATAAA	-16	NA	53097666	53102340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53098052_53100711_53100858_53101040_53101161_53102044
transcript_22232.nnic	chr12	+	782	4	NNC	ENSG00000167779.9	novel	1177	4	NA	NA	435	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	107.483332041143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	137	False	NA	26	True	AATAAA	-16	NA	53098101	53102340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_53098322_53100711_53100858_53101040_53101161_53102044
transcript_22235.known	chr12	-	1836	8	FSM	ENSG00000172819.17	ENST00000338561.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_7	50.13084919305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGCTCTCTGAGAG	-10	True	NA	NA	False	NA	NA	NA	53220259	53211330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
transcript_22236.nnic	chr12	-	2029	4	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	127.15607207942	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	5544	False	NA	-4	True	AATAAA	-15	NA	53214843	53210568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_53211864_53213084_53213244_53214058_53214236_53214445
transcript_22238.known	chr12	-	944	4	FSM	ENSG00000172819.17	ENST00000550362.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	25.3026129524645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATCTGGCTACCCAGGG	NA	False	NA	NA	False	NA	NA	NA	53232980	53227499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53227688_53231168_53231236_53231973_53232193_53232510
transcript_22240.known	chr12	+	1318	2	FSM	ENSG00000182544.9	ENST00000551660.2	1318	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCACCTTCAGCCCATGC	9752	False	NA	NA	False	NA	NA	NA	53251652	53253752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53252036_53252817
transcript_22241.known	chr12	+	1763	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGATTTACTCATCC	-5	True	NA	15	True	AATAAA	-17	NA	53252094	53254406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53252269_53252817
transcript_22245.known	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	22.5788740984921	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	-23	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_22248.known	chr12	+	640	6	FSM	ENSG00000123349.15	ENST00000676468.1	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1372.78948131168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2831	False	NA	33	True	AATAAA	-21	NA	53295524	53299452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53296218_53296276_53297849_53297925_53298044_53298151_53299268
transcript_22252.known	chr12	+	596	6	FSM	ENSG00000123349.15	ENST00000334478.9	596	6	0	0	0	0	multi-exon	FALSE	canonical	3	3061	junction_2	193.553506814007	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_22253.known	chr12	+	635	6	FSM	ENSG00000123349.15	ENST00000549759.2	635	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	1643.95279737589	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGGTCTTTTCTTGG	2812	False	NA	28	True	AATAAA	-16	NA	53295505	53299447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53296429_53296468_53297849_53297925_53298044_53298151_53299268
transcript_22262.known	chr12	+	988	6	FSM	ENSG00000139637.14	ENST00000548632.5	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	160.030747045685	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	32	True	NA	13	True	AATAAA	-14	NA	53299749	53307171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53306197_53306321_53306679_53306862_53306965
transcript_22264.known	chr12	+	564	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	1439.8522493645	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
transcript_22265.known	chr12	+	946	5	FSM	ENSG00000123349.15	ENST00000550069.2	946	5	0	0	0	0	multi-exon	TRUE	canonical	2	125	junction_3	1419.76635401745	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAATGTTGGTCT	2785	False	NA	20	True	AATAAA	-8	NA	53295478	53299439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298048_53298151_53299268
transcript_22267.known	chr12	+	1848	10	FSM	ENSG00000288663.1	ENST00000676527.1	1848	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	1523.70108212022	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	2798	False	NA	13	True	AATAAA	-14	NA	53295491	53307171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296218_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_22268.known	chr12	+	528	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1509.53691160568	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2815	False	NA	33	True	AATAAA	-21	NA	53295508	53299452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_22269.known	chr12	+	595	5	FSM	ENSG00000123349.15	ENST00000550880.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1695.89040035021	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGTCTTTTCTT	2831	False	NA	26	True	AATAAA	-14	NA	53295524	53299445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296429_53296552_53297849_53297925_53298044_53298151_53299268
transcript_2227.known	chr1	-	620	7	FSM	ENSG00000176261.16	ENST00000473294.7	620	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	464.90169211709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	7	True	NA	-20	True	AATAAA	-17	NA	32650535	32621829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32633261_32633355_32633644_32633728_32633950_32634111_32634767_32634793_32650432
transcript_22270.known	chr12	+	559	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1696.40045390232	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
transcript_22272.known	chr12	+	840	5	FSM	ENSG00000139637.14	ENST00000549488.5	840	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	179.828390417086	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	62	False	NA	19	True	AATAAA	-20	NA	53300092	53307177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_22273.known	chr12	+	478	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	1369.65275404632	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2831	False	NA	31	True	AATAAA	-19	NA	53295524	53299450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
transcript_22278.known	chr12	+	392	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1643	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-15	True	NA	31	True	AATAAA	-19	NA	53295535	53299450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53298044_53298151_53299268
transcript_22279.known	chr12	+	1132	3	FSM	ENSG00000139637.14	ENST00000551670.1	1132	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	24	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGTTTTGAGATGG	32	True	NA	NA	False	NA	NA	NA	53299749	53303848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53299954_53300149_53300263_53303033
transcript_22280.known	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	44	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53299130_53300142
transcript_22281.known	chr12	+	1980	5	FSM	ENSG00000123349.15	ENST00000552341.5	1980	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1457.55726731405	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTTGGTCTTTTCTTG	-9	True	NA	27	True	AATAAA	-15	NA	53295541	53299446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53295640_53295838_53295942_53296429_53297925_53298044_53298151_53299268
transcript_22285.known	chr12	-	1815	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_15	51.3477901720761	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-25	True	NA	-8	True	AATAAA	-23	NA	53321610	53307459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_22287.nic	chr12	-	1709	16	NIC	ENSG00000094914.14	novel	1815	16	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	103.752568910633	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	7783	False	NA	-8	True	AATAAA	-23	NA	53321632	53307459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321470
transcript_22297.known	chr12	-	1703	15	FSM	ENSG00000094914.14	ENST00000394384.7	1703	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	104.591845196615	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTACCAGTCTGTCTTT	-11	True	NA	-7	True	AATAAA	-24	NA	53321596	53307458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_2230.known	chr1	-	548	6	FSM	ENSG00000176261.16	ENST00000465588.2	548	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	378.331812038057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAATAAAAGACTCCT	703	False	NA	-48	True	AATGAA	-41	NA	32650525	32621857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650401
transcript_22311.known	chr12	-	1606	16	FSM	ENSG00000094914.14	ENST00000549450.6	1606	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	103.752568910633	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTACCAGTCTGTCTTTT	20	True	NA	-6	True	AATAAA	-25	NA	53321257	53307457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321200
transcript_22312.known	chr12	+	2001	11	FSM	ENSG00000135409.11	ENST00000257863.9	2001	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	13.8942434122913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTGGTCCTTCCTCTA	-5	True	NA	2	True	AATAAA	-19	NA	53423854	53431672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53423984_53424287_53424471_53424708_53424901_53425164_53425243_53425454_53425574_53425688_53425920_53428895_53429011_53429452_53429626_53429830_53429979_53430145_53430283_53431176
transcript_22316.nic	chr12	+	1325	8	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-48	54	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	13.0102000800314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1168	False	NA	14	True	CATAAA	-14	NA	53425027	53431527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53429830_53429979_53430145_53430283_53431176
transcript_22318.nnic	chr12	+	1116	7	NIC	ENSG00000135409.11	novel	887	7	NA	NA	7	54	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	12.6315302143309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	-15	True	NA	14	True	CATAAA	-14	NA	53425088	53431527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53430145_53430283_53431176
transcript_22320.nic	chr12	+	1040	6	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-48	54	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	8.89044430835715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1168	False	NA	14	True	CATAAA	-14	NA	53425027	53431527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53431176
transcript_22321.nnic	chr12	+	1060	6	NNC	ENSG00000135409.11	novel	887	7	NA	NA	-48	54	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	13.0843417870369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1168	False	NA	14	True	CATAAA	-14	NA	53425027	53431527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429646_53431176
transcript_2233.known	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	247.535532802869	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	668	False	NA	-20	True	AATAAA	-17	NA	32650560	32621829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_22333.known	chr12	-	4319	15	FSM	ENSG00000139625.13	ENST00000267079.6	4319	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	25.0542269031452	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	7907	False	NA	NA	False	NA	NA	NA	53499615	53479668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487156_53487254_53487429_53499426
transcript_22354.known	chr12	+	1105	4	FSM	ENSG00000205352.11	ENST00000429243.7	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	1521	junction_1	282.673348977618	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	-3	True	NA	36	True	AATAAA	-20	NA	53441733	53446638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53446014
transcript_22355.known	chr12	+	1009	4	FSM	ENSG00000205352.11	ENST00000551003.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	817.168417293658	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACCTGTGCTATCAC	-5	True	NA	34	True	AATAAA	-18	NA	53441731	53446636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443486_53443774_53446014
transcript_22356.known	chr12	+	927	4	FSM	ENSG00000205352.11	ENST00000379786.8	927	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	816.250097839028	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	-2	True	NA	36	True	AATAAA	-20	NA	53441761	53446638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443540_53443774_53446014
transcript_22357.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549068.5	755	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	840.144035270143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCAGGCCTTTTGTTG	8	True	NA	-51	True	AATACA	-3	NA	53441744	53446475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443566_53443774_53446014
transcript_22358.known	chr12	+	810	4	FSM	ENSG00000205352.11	ENST00000546581.5	810	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	821.760846529505	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATCACCTTGGCTGG	11	True	NA	43	True	AATAAA	-27	NA	53441747	53446645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441793_53442694_53442734_53443678_53443774_53446014
transcript_22359.known	chr12	+	688	4	FSM	ENSG00000205352.11	ENST00000547368.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	945.241532919262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGAGGATTGCCATGG	-8	True	NA	-92	True	NA	NA	NA	53441755	53446218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53441818_53442694_53442734_53443390_53443774_53446014
transcript_2236.known	chr1	-	766	6	FSM	ENSG00000176261.16	ENST00000373506.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	375.03887798467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGGTGTGCCTCATGCC	-12	True	NA	NA	False	NA	NA	NA	32650554	32621603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32650428
transcript_22360.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549135.1	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	921.787755758703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAATGTTGAAGACAAG	600	False	NA	5	True	AATGAA	-33	NA	53442554	53446315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53442587_53442694_53442734_53443390_53443774_53446014
transcript_22363.known	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	229.199683459553	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	265	False	NA	35	True	ATTAAA	-16	NA	53452367	53479614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_22364.known	chr12	+	1418	12	FSM	ENSG00000197111.16	ENST00000552819.5	1418	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	285.763671646796	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGATTCATGTGGGT	-1	True	NA	43	True	ATTAAA	-42	NA	53454733	53479824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_22365.known	chr12	+	1202	13	FSM	ENSG00000197111.16	ENST00000548933.5	1202	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	260.241914699894	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTGTTGATGCTGAGA	3	True	NA	41	True	ATTAAA	-22	NA	53454784	53479620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_22371.known	chr12	+	1510	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	46.0365004643055	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-31	True	NA	22	True	AATAAA	-24	NA	53501282	53506431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22372.nic	chr12	+	1579	9	NIC	ENSG00000139546.11	novel	1855	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	158.067183105792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-31	True	NA	22	True	AATAAA	-24	NA	53501282	53506431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503729_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22374.known	chr12	+	1855	9	FSM	ENSG00000139546.11	ENST00000550147.5	1855	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	119.688071147462	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	7	True	NA	22	True	AATAAA	-24	NA	53500920	53506431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22378.known	chr12	+	1514	9	FSM	ENSG00000139546.11	ENST00000549572.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	148.814849309469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGCCCTTCTCTTC	2	True	NA	14	True	AATAAA	-16	NA	53501603	53506423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22379.known	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	110.236606329295	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	17	True	NA	3	True	AATAAA	-5	NA	53501618	53506412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22381.nic	chr12	+	1438	9	NIC	ENSG00000139546.11	novel	1402	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	148.777045860576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-17	True	NA	22	True	AATAAA	-24	NA	53501584	53506431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53501709_53502014_53502185_53503026_53503130_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22384.nic	chr12	+	1385	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	131.909523723572	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-34	True	NA	22	True	AATAAA	-24	NA	53501279	53506431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_22393.nic	chr12	+	1345	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	122.294725969684	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-36	True	NA	22	True	AATAAA	-24	NA	53501277	53506431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_53501462_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_2241.nic	chr1	-	1054	6	NIC	ENSG00000176261.16	novel	598	7	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_4	379.439903014957	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	194	False	NA	-20	True	AATAAA	-17	NA	32651034	32621829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_22414.known	chr12	+	916	6	FSM	ENSG00000139546.11	ENST00000552857.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	198.305824422784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCTGTGGGTGCCATC	-40	True	NA	NA	False	NA	NA	NA	53501273	53506229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501462_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_22415.known	chr12	+	1466	9	FSM	ENSG00000139546.11	ENST00000549679.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	156.967353293607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	3	True	NA	-13	True	AATGAA	-22	NA	53501604	53506396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_53501709_53502014_53502185_53503026_53503213_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_22416.known	chr12	-	440	3	FSM	ENSG00000139574.9	ENST00000267017.4	440	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGTCTGTGTGAG	-1	True	NA	-3	True	AATAAA	-18	NA	53507484	53506687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53506894_53507020_53507143_53507372
transcript_22417.known	chr12	-	6660	12	FSM	ENSG00000170653.19	ENST00000420353.7	6660	12	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_8	42.1047493444074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTCTGATGCTTCACT	-15	True	NA	-3	True	ATTAAA	-18	NA	53626382	53512053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53626278
transcript_22419.known	chr12	-	774	4	FSM	ENSG00000170653.19	ENST00000548118.6	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	64.8553947040816	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	0	True	NA	-2	True	AATAAA	-21	NA	53625996	53542886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53625950
transcript_22420.known	chr12	-	860	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	20.0055547841649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-43	True	NA	-2	True	AATAAA	-21	NA	53626410	53542886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
transcript_22427.known	chr12	-	1792	5	FSM	ENSG00000135390.21	ENST00000338662.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2013.91099604724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGACAAATAAATACT	1	True	NA	1	True	NA	NA	NA	53677398	53665201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676175
transcript_22430.known	chr12	-	632	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	3190	junction_4	636.61703558733	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	10	True	NA	-9	True	AATAAA	-17	NA	53676083	53665169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
transcript_22431.nic	chr12	-	3044	16	NIC	ENSG00000012822.16	novel	5576	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	35.1330170763755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTGTTGTCACAAAATG	-2	True	NA	-14	True	AATATA	-15	NA	53727452	53711118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_53712122_53713099_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53725689_53725760_53727403
transcript_22434.known	chr12	-	5576	15	FSM	ENSG00000012822.16	ENST00000550804.6	5576	15	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	12.9638429676464	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGCCATGTGTTGCTT	-2	True	NA	NA	False	AATAAA	-20	NA	53727452	53708516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_53712122_53713099_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_22436.known	chr12	-	2119	6	FSM	ENSG00000123415.16	ENST00000513838.5	2119	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	82.7357238440566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	158	False	NA	-1	True	AATAAA	-29	NA	54188957	54180357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188510_54188597_54188725
transcript_22439.known	chr12	-	926	5	FSM	ENSG00000123415.16	ENST00000514685.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	80.6113360514512	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	175	False	NA	-16	True	AATAAA	-34	NA	54188940	54181452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188720
transcript_22443.nic	chr12	-	746	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	72.0208303201234	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-9	True	NA	-16	True	AATAAA	-34	NA	54188990	54181452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188950
transcript_22447.known	chr12	-	627	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	73.8120736886739	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCTCATCTGTAAAACA	5	True	NA	-34	True	AATAAA	-16	NA	54188976	54181470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
transcript_2245.nic	chr1	-	545	6	NIC	ENSG00000176261.16	novel	620	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_4	357.493832114625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-11	True	NA	-20	True	AATAAA	-17	NA	32650553	32621829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634111_32634767_32634793_32650432
transcript_22451.nnic	chr12	-	1774	4	NIC	ENSG00000123415.16	novel	1571	4	NA	NA	5	0	intron_retention	FALSE	canonical	2	4	junction_3	91.9238815542512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	163	False	NA	-31	True	AATAAA	-19	NA	54188952	54181467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_54182624_54183655_54183960_54187818_54187906_54188725
transcript_22453.nnic	chr12	-	1633	4	NIC	ENSG00000123415.16	novel	1571	4	NA	NA	5	0	intron_retention	FALSE	canonical	1	1	junction_3	93.1235738145825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	163	False	NA	-31	True	AATAAA	-19	NA	54188952	54181467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_54182624_54183655_54183960_54187818_54187906_54188866
transcript_22454.known	chr12	-	1571	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	82.192186706253	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	7	True	NA	-31	True	AATAAA	-19	NA	54188974	54181467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
transcript_22455.known	chr12	-	465	4	FSM	ENSG00000123415.16	ENST00000507904.5	465	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	103.964737611686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTGGGGCCTGTGCT	-9	True	NA	NA	False	NA	NA	NA	54188990	54182584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54183655_54183960_54188514_54188597_54188950
transcript_22456.known	chr12	-	1697	3	FSM	ENSG00000123415.16	ENST00000508394.6	1697	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	86.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAGAGAGTCTGGGCTT	-13	True	NA	NA	False	NA	NA	NA	54188994	54181274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54183655_54183960_54188950
transcript_22457.known	chr12	-	561	2	FSM	ENSG00000123415.16	ENST00000511522.5	561	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCCCTTGGGGCCTTGC	-4	True	NA	NA	False	GGGGCT	-21	NA	54188985	54182097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54182624_54188950
transcript_22470.known	chr12	+	3744	11	FSM	ENSG00000135486.19	ENST00000340913.11	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_8	5148.18032318216	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	8	True	NA	41	True	AATAAA	-15	NA	54280725	54287087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
transcript_22474.known	chr12	+	1234	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	5555.80178642111	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	-1	True	NA	42	True	AATAAA	-16	NA	54280747	54287088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
transcript_22492.known	chr12	+	2793	10	FSM	ENSG00000135486.19	ENST00000677210.1	2793	10	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_8	5291.58813473368	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	NA	False	NA	135	True	NA	NA	NA	54280662	54285842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257
transcript_22493.known	chr12	+	1811	10	FSM	ENSG00000135486.19	ENST00000677375.1	1811	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	4590.32237497246	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTCTCTTGAATGA	NA	False	NA	-3	True	AATAAA	-2	NA	54280662	54285229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284239_54284318_54284548
transcript_22494.known	chr12	+	2278	10	FSM	ENSG00000135486.19	ENST00000677249.1	2278	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4654.32250974203	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	NA	False	NA	38	True	NA	NA	NA	54280690	54285745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282663_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_22502.known	chr12	+	1294	10	FSM	ENSG00000135486.19	ENST00000330752.12	1294	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4654.32250974203	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGTGTAAAGTTAGTC	26	False	NA	24	True	AATAAA	-15	NA	54280774	54284881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282670_54282842_54282875_54283811_54283968_54284257_54284318_54284548
transcript_22522.known	chr12	+	2596	9	FSM	ENSG00000135486.19	ENST00000550482.2	2596	9	0	0	0	0	multi-exon	FALSE	canonical	3	11435	junction_7	1600.74470462188	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	-14	True	NA	135	True	NA	NA	NA	54280703	54285842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257
transcript_22546.known	chr12	+	880	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	358.973707183381	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	2	True	NA	51	True	NA	NA	NA	54325138	54350913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22566.known	chr12	-	1832	5	FSM	ENSG00000094916.16	ENST00000439541.6	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	146.289097338113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTACCACCAAGAGT	-12	True	NA	NA	False	NA	NA	NA	54259592	54240624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
transcript_22567.known	chr12	-	11546	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	39.0600499231632	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTGGTGGTTTAA	-8	True	NA	-22	True	AATAAA	-20	NA	54280122	54230941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
transcript_22569.known	chr12	-	894	5	FSM	ENSG00000094916.16	ENST00000550411.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	169.322916346252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGGATGGTCTCTGTC	35	True	NA	NA	False	AAGAAA	-15	NA	54259545	54241754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
transcript_22573.known	chr12	-	1523	4	FSM	ENSG00000123405.14	ENST00000553070.5	1523	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.0830459735946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCCAGAGGGGTGGAA	-18	True	NA	NA	False	NA	NA	NA	54301015	54292373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54293382_54295134_54295305_54300146_54300277_54300800
transcript_22582.known	chr12	-	1656	3	FSM	ENSG00000123405.14	ENST00000435572.7	1656	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCACTGTGTCTTC	-18	True	NA	-5	True	TATAAA	-15	NA	54301015	54292110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54293382_54295134_54295305_54300800
transcript_22583.known	chr12	-	2627	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATTAAACATTTTT	-19	True	NA	NA	False	AATAAA	-29	NA	54280133	54271840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54274342_54280007
transcript_22588.known	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	3	True	NA	5	True	NA	NA	NA	54285906	54287051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54286733_54286952
transcript_22589.known	chr12	+	1890	9	FSM	ENSG00000111481.10	ENST00000262061.7	1890	9	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	171.870409029594	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGTTTC	-6	True	NA	14	True	AATAAA	-15	NA	54325130	54351846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22590.known	chr12	+	736	7	FSM	ENSG00000111481.10	ENST00000549116.5	736	7	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	447.897836813511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGTGTTTTCCTCCCT	7	True	NA	17	True	ATTAAA	-16	NA	54325143	54350879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_54325182_54340546_54340616_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_22591.known	chr12	-	4250	30	FSM	ENSG00000161638.11	ENST00000293379.9	4250	30	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_15	17.9534342847248	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCTCATGTTACTC	-1	True	NA	-6	True	AATAAA	-35	NA	54419266	54395260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54396377_54397364_54397488_54398596_54398699_54399644_54399759_54399863_54399948_54400845_54400996_54401372_54401479_54401584_54401666_54401775_54401856_54402000_54402094_54402179_54402331_54402982_54403051_54403186_54403325_54403624_54403780_54403910_54403967_54404144_54404247_54404429_54404476_54404702_54404895_54405165_54405375_54405663_54405717_54405869_54405927_54407648_54407693_54407831_54407877_54408109_54408236_54408755_54408802_54408892_54408955_54409231_54409353_54409484_54409598_54411833_54411965_54418980
transcript_22592.known	chr12	-	807	9	FSM	ENSG00000170627.11	ENST00000305879.8	807	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	2.521780125229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATAGTTTGGTCAAGTA	-14	True	NA	-5	True	AATAAA	-17	NA	54473602	54455956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54465066_54465168_54471232_54471278_54473545
transcript_22593.known	chr12	-	671	8	FSM	ENSG00000170627.11	ENST00000552395.5	671	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.92072118575155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTAATAGTTTGGTCAA	18	True	NA	-8	True	AATAAA	-14	NA	54473570	54455959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54471232_54471278_54473545
transcript_226.known	chr1	-	878	2	FSM	ENSG00000188976.11	ENST00000469563.1	878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1476	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCTGGC	3	True	NA	NA	False	AAAAAG	-20	NA	959256	958245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_959082_959214
transcript_22601.known	chr12	+	571	4	FSM	ENSG00000135441.8	ENST00000548925.6	562	4	-9	0	-1	0	multi-exon	FALSE	canonical	3	845	junction_1	109.393276250823	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	-19	True	NA	16	True	AATAAA	-16	NA	55716036	55719703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55719498
transcript_22605.known	chr12	+	837	4	FSM	ENSG00000135441.8	ENST00000547076.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	381.811762812806	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	67	False	NA	16	True	AATAAA	-16	NA	55716291	55719703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716718_55716932_55717006_55719090_55719224_55719498
transcript_22606.known	chr12	+	1229	3	FSM	ENSG00000135441.8	ENST00000549147.1	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_1	123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGGGGGCACTTCA	-18	True	NA	NA	False	NA	NA	NA	55716037	55720087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716197_55716932_55717006_55719090
transcript_22608.known	chr12	+	421	3	FSM	ENSG00000135441.8	ENST00000553100.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	516.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGCCTTGAATAAAAC	25	True	NA	-17	True	NA	NA	NA	55716080	55719670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716197_55719090_55719224_55719498
transcript_22609.known	chr12	+	531	3	FSM	ENSG00000135441.8	ENST00000551926.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	412.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAGTGTCAGAAAAGGTA	22	True	NA	NA	False	NA	NA	NA	55716512	55719343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716718_55716932_55717006_55719090
transcript_22610.known	chr12	+	525	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	490.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	40	False	NA	16	True	AATAAA	-16	NA	55716530	55719703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55716718_55719090_55719224_55719498
transcript_22611.known	chr12	+	1316	2	FSM	ENSG00000170439.8	ENST00000394252.4	1316	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGACTGATGGCAGCA	-3	True	NA	16	True	AATAAA	-18	NA	55681735	55684611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55682253_55683812
transcript_22613.known	chr12	-	981	8	FSM	ENSG00000135404.12	ENST00000420846.7	981	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	1226.82828164868	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	8	True	NA	-2	True	NA	NA	NA	55728650	55725442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728515
transcript_22615.known	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	1195.93800603782	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
transcript_22619.known	chr12	+	1443	2	FSM	ENSG00000258056.3	ENST00000552576.3	1458	2	10	5	10	-5	multi-exon	FALSE	canonical	1	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTTTTCCTCTTTTT	-6	True	NA	30	True	NA	NA	NA	55729103	55730852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55729356_55729661
transcript_22620.known	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	3351	junction_3	166.505672242386	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	1193	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
transcript_22621.known	chr12	-	829	8	FSM	ENSG00000135404.12	ENST00000550050.5	829	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1250.78726229132	5136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAATTAAACGGATTA	8	True	NA	-66	True	NA	NA	NA	55729000	55725506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727150_55727340_55728275_55728353_55728952
transcript_22622.known	chr12	-	621	6	FSM	ENSG00000135404.12	ENST00000552067.5	621	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1415.39953370064	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATGCTTGATTCCTTC	2547	False	NA	-7	True	NA	NA	NA	55727128	55725447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727081
transcript_22623.known	chr12	-	648	5	FSM	ENSG00000135404.12	ENST00000548160.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	3351	junction_3	141.870319306048	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	0	True	NA	-29	True	ATTAAA	-25	NA	55727059	55725469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889
transcript_22629.known	chr12	-	1163	12	FSM	ENSG00000205323.9	ENST00000546604.5	1163	12	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	725.252478123855	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGGTAGGGAGGAACA	-8	True	NA	NA	False	NA	NA	NA	55817724	55752462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_2263.known	chr1	-	817	4	FSM	ENSG00000176261.16	ENST00000492007.6	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	412.267712374698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTACCTCAGCCTCCCG	-7	True	NA	NA	False	NA	NA	NA	32650549	32621310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32621949_32627507_32627545_32634767_32634793_32650432
transcript_22637.known	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2262	junction_1	156.243399860602	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-8	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_22644.known	chr12	-	726	10	FSM	ENSG00000205323.9	ENST00000552080.1	726	10	0	0	0	0	multi-exon	FALSE	canonical	3	2376	junction_3	125.955116442424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTGCCCAGGAAGTG	7	True	NA	NA	False	NA	NA	NA	55817709	55760423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_22646.nnic	chr12	-	843	9	NIC	ENSG00000205323.9	novel	898	11	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	876.035521183359	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	NA	False	NA	-11	True	AATAAA	-19	NA	55817764	55757269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55757554_55760550_55760641_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_22647.known	chr12	-	3236	9	FSM	ENSG00000123342.16	ENST00000322569.9	3236	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.61904085496962	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGGCGTCTG	0	True	NA	NA	False	AATAAA	-17	NA	55842936	55835432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55837375_55837554_55837683_55837842_55838008_55838605_55838735_55839495_55839742_55840666_55840883_55841105_55841237_55842352_55842439_55842743
transcript_22651.known	chr12	-	3256	7	FSM	ENSG00000135392.19	ENST00000678005.2	3256	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_6	22.7961985134949	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	5	True	NA	-5	True	TATAAA	-15	NA	55829587	55820984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488
transcript_22652.known	chr12	-	3284	7	FSM	ENSG00000135392.19	ENST00000547445.2	3284	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	88.4734737396218	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTATCTTCCCTCTTT	6403	False	NA	-7	True	TATAAA	-13	NA	55830824	55820986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55830695
transcript_22663.known	chr12	+	884	5	FSM	ENSG00000182796.15	ENST00000636428.1	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	24.3156328315757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAATTGACTCCCGAA	-9	True	NA	NA	False	AATAGA	-15	NA	55830827	55835234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55831256_55831350_55832958_55833015_55833446_55833542_55834850
transcript_22667.known	chr12	+	1258	4	FSM	ENSG00000135414.10	ENST00000546799.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	13.0639452948436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCCTTTTCCTTG	92	False	NA	2	True	AATAAA	-15	NA	55743398	55757127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55743762_55748585_55748984_55749501_55749884_55757012
transcript_22668.known	chr12	+	2019	4	FSM	ENSG00000123353.10	ENST00000243045.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	37.0435179514881	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGTGTTGGGGGAG	-13	True	NA	NA	False	AATAAA	-15	NA	55818040	55821879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55818113_55818998_55819174_55819341_55819494_55820259
transcript_22669.known	chr12	+	760	4	FSM	ENSG00000123353.10	ENST00000552672.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	166.745981127649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTTGCTGTGTATT	-13	True	NA	28	True	NA	NA	NA	55818040	55820712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55818113_55819090_55819174_55819341_55819494_55820259
transcript_22670.known	chr12	+	593	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	27.5358352374178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	2	True	NA	NA	False	NA	NA	NA	55830838	55835047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
transcript_22671.known	chr12	+	575	4	FSM	ENSG00000182796.15	ENST00000637951.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	31.2552217859494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTACCCCTGTGAGGGCC	4	True	NA	NA	False	NA	NA	NA	55830840	55835007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55832958_55833039_55833446_55833542_55834850
transcript_22674.known	chr12	+	2313	4	FSM	ENSG00000182796.15	ENST00000508246.6	2313	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	24.5266295188629	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	4	True	NA	3	True	AATAAA	-17	NA	55830840	55836244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850
transcript_22675.known	chr12	+	2924	5	FSM	ENSG00000182796.15	ENST00000478241.6	2924	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.3510708213071	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	NA	False	NA	3	True	AATAAA	-17	NA	55829607	55836244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55829826_55829959_55831084_55831256_55831350_55833446_55833542_55834850
transcript_22678.known	chr12	+	8801	3	FSM	ENSG00000135414.10	ENST00000257868.10	8801	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCTTTTCTATTT	2	True	NA	7	True	AATAAA	-24	NA	55743121	55757264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55743762_55748585_55748984_55749501
transcript_22680.known	chr12	+	2230	3	FSM	ENSG00000182796.15	ENST00000482378.6	2230	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	27	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	-4	True	NA	5	True	AATAAA	-19	NA	55830832	55836246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55831084_55832958_55833542_55834850
transcript_22684.known	chr12	+	2727	24	FSM	ENSG00000065357.20	ENST00000331886.10	2727	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	9.4522979072704	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	-12	True	NA	24	True	AATAAA	-33	NA	55931161	55954023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55931345_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_22685.nic	chr12	+	2623	24	NIC	ENSG00000065357.20	novel	2770	24	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	9.74417571180125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	-27	True	NA	24	True	AATAAA	-33	NA	55932044	55954023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_55932124_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_22688.known	chr12	-	1073	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	337	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGCCTCCTTATTT	9	True	NA	-15	True	AATAAA	-16	NA	55927112	55901413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55902356_55903386_55903481_55927075
transcript_22689.known	chr12	-	1207	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	43	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGCCTCCTTATTTT	5	True	NA	-14	True	AATAAA	-17	NA	55927894	55901412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55902356_55903386_55903481_55927724
transcript_22690.known	chr12	-	653	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTCACTGTTTTG	4873	False	NA	64	True	ATTAAA	-1	NA	55927756	55913745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55914367_55927724
transcript_22691.known	chr12	-	884	3	FSM	ENSG00000170473.17	ENST00000454792.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGAATAAATGTGATTA	24	True	NA	-16	True	AATAAA	-14	NA	55927875	55913825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55914367_55927075_55927268_55927724
transcript_22693.nic	chr12	-	2002	12	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_6	219.988617286298	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-4	True	NA	-4	True	AATAAA	-15	NA	55966044	55954104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22698.known	chr12	-	2126	11	FSM	ENSG00000185664.15	ENST00000548747.6	2126	11	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_8	77.6443172421524	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-2	True	NA	-4	True	AATAAA	-15	NA	55966042	55954104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22702.known	chr12	-	2127	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	270.894518216962	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	8096	False	NA	-4	True	AATAAA	-15	NA	55966022	55954104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22705.nic	chr12	-	1981	10	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	57	junction_8	276.463021883824	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-4	True	NA	-4	True	AATAAA	-15	NA	55966044	55954104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961621_55961733_55965935
transcript_22707.nic	chr12	-	1966	10	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	27	junction_6	293.226664106813	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-4	True	NA	-4	True	AATAAA	-15	NA	55966044	55954104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_22710.known	chr12	-	1867	9	FSM	ENSG00000185664.15	ENST00000550464.5	1867	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	300.622271297387	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	-2	True	NA	-5	True	AATAAA	-14	NA	55966042	55954105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55965935
transcript_22719.known	chr12	+	2240	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_6	23.2050042495627	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	-7	True	NA	24	True	ATTAAA	-26	NA	55966829	55972789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
transcript_22721.known	chr12	+	1260	6	FSM	ENSG00000123374.11	ENST00000354056.4	1260	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	122.886939908194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTACACGTTAGATT	-6	True	NA	NA	False	TATAAA	-16	NA	55966830	55971912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55971043_55971248_55971520
transcript_22722.known	chr12	-	461	3	FSM	ENSG00000185664.15	ENST00000549413.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_2	54	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTCGCTCTGTCGCCC	8097	False	NA	NA	False	NA	NA	NA	55966021	55961199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_55961464_55961621_55961733_55965935
transcript_22723.nic	chr12	+	3403	7	NIC	ENSG00000111540.16	novel	5273	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	228.486809733565	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	-11	True	NA	8	True	AGTAAA	-19	NA	55974073	55994706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_55974140_55979371_55979475_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_22724.known	chr12	+	5273	6	FSM	ENSG00000111540.16	ENST00000360299.10	5273	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	90.3269616449042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTGTTTCATTTTTG	-7	True	NA	13	True	AATAAA	-14	NA	55974077	55996683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_22727.nnic	chr12	+	3455	6	NNC	ENSG00000111540.16	novel	5273	6	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	186.668261897946	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	34	False	NA	8	True	AGTAAA	-19	NA	55974118	55994706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_55974340_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_22728.known	chr12	+	3148	5	FSM	ENSG00000111540.16	ENST00000549505.5	3148	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	213.754970702438	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	-11	True	NA	8	True	AGTAAA	-19	NA	55974073	55994706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55974140_55986868_55987124_55990681_55990805_55991359_55991454_55992096
transcript_22729.known	chr12	+	2394	6	FSM	ENSG00000139531.13	ENST00000394115.6	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	55.9127892346644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTACTTTTCTAATAAAT	0	True	NA	-28	True	NA	NA	NA	55997287	56005486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55997340_55997614_55997724_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_2273.known	chr1	-	538	2	FSM	ENSG00000176261.16	ENST00000466361.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGTGAGGCTGAGGCA	7	True	NA	NA	False	AATACA	-41	NA	32650535	32634357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32634793_32650432
transcript_22731.known	chr12	+	2319	5	FSM	ENSG00000139531.13	ENST00000266971.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	42.3696530549874	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	-12	True	NA	11	True	AATAAA	-21	NA	55997275	56005525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002542_56002721_56003617
transcript_22733.known	chr12	+	2306	4	FSM	ENSG00000139531.13	ENST00000356124.8	2306	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	62.6968012652072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	1165	False	NA	11	True	AATAAA	-21	NA	55997179	56005525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_55997340_56002211_56002272_56002542_56002721_56003617
transcript_22735.known	chr12	+	623	5	FSM	ENSG00000197728.11	ENST00000552361.1	623	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4951.4591978022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	9	False	NA	17	True	AATAAA	-18	NA	56041892	56044223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56042065_56042132_56042170_56042424_56042603_56043362_56043494_56044118
transcript_22736.known	chr12	+	1140	4	FSM	ENSG00000197728.11	ENST00000646449.2	1140	4	0	0	0	0	multi-exon	FALSE	canonical	3	8340	junction_1	2073.62104113124	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGTGAAATGGAGAT	-12	True	NA	NA	False	ATTAAA	-39	NA	56041917	56044697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56042170_56042424_56042603_56043362_56043494_56044118
transcript_22737.known	chr12	+	1204	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	8340	junction_1	958.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	15	True	NA	17	True	AATAAA	-18	NA	56042139	56044223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56042170_56042424_56043494_56044118
transcript_22738.nnic	chr12	+	443	3	NNC	ENSG00000197728.11	novel	1272	5	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	244	junction_1	5006.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	49	False	NA	17	True	AATAAA	-18	NA	56042173	56044223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_56042381_56043362_56043494_56044118
transcript_22740.known	chr12	+	5615	28	FSM	ENSG00000065361.17	ENST00000267101.8	5615	28	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	19.3372353093753	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTGTCTGTCAAATGA	-18	True	NA	19	True	AATAAA	-21	NA	56080164	56103505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_22742.known	chr12	+	2386	13	FSM	ENSG00000170515.14	ENST00000303305.11	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_12	52.7973063285956	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGTATGCTGCTCT	-20	True	NA	18	True	AATAAA	-21	NA	56104558	56113910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475_56111530_56112822
transcript_22748.nic	chr12	+	1548	12	ISM	ENSG00000170515.14	ENST00000303305.11	2386	13	-270	2401	-248	0	5prime_fragment	FALSE	canonical	3	1511	junction_5	48.8357002594896	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	56104288	56111509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475
transcript_22753.known	chr12	+	1027	3	FSM	ENSG00000065361.17	ENST00000411731.6	1027	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGTGCGCACCTGTA	5	True	NA	14	True	AATAAA	-23	NA	56080136	56085623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56080383_56083750_56083903_56084994
transcript_22757.known	chr12	+	469	4	FSM	ENSG00000229117.9	ENST00000501597.3	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	5052	junction_1	7259.61243226294	19106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	0	True	NA	11	True	AATAAA	-38	NA	56116589	56117832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56116660_56116774_56116800_56117188_56117212_56117481
transcript_22759.known	chr12	+	335	4	FSM	ENSG00000229117.9	ENST00000546485.5	335	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	9715.9498077474	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGTCCTCTGCCCTG	-1	True	NA	NA	False	CATAAA	-10	NA	56116631	56117710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56116660_56116774_56116830_56117188_56117212_56117481
transcript_22762.known	chr12	+	551	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	9695.56098886954	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	0	True	NA	5	True	AATAAA	-32	NA	56116632	56117826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
transcript_22766.known	chr12	+	676	3	FSM	ENSG00000229117.9	ENST00000546591.6	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	12955	junction_1	4922	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTGGAGTTGGATGGG	0	True	NA	45	True	TATAAA	-34	NA	56116632	56117967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56116800_56117188_56117212_56117481
transcript_22768.known	chr12	+	3577	31	FSM	ENSG00000139641.13	ENST00000267113.4	3577	31	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	107.09719884292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACTGCACGGCCTTTAT	6	True	NA	NA	False	NA	NA	NA	56128266	56144041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134079_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_22769.known	chr12	+	4180	31	FSM	ENSG00000139641.13	ENST00000394048.10	4180	31	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_18	45.0552870248197	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTCTTTTCCTTAA	6	True	NA	17	True	ATTAAA	-17	NA	56128266	56144674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134109_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_22771.known	chr12	+	7121	3	FSM	ENSG00000135482.7	ENST00000257940.7	7121	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTTTTTCCCCCTT	4	True	NA	NA	False	AATAAA	-18	NA	56118265	56127514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56118319_56119087_56119152_56120510
transcript_22772.known	chr12	+	743	3	FSM	ENSG00000135482.7	ENST00000546903.1	743	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAATTGCCGTTTCATCC	-3	True	NA	NA	False	NA	NA	NA	56118406	56120828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56118768_56119087_56119152_56120510
transcript_22775.known	chr12	-	4076	28	FSM	ENSG00000139613.12	ENST00000267064.8	4076	28	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	55.6883844183155	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	731	False	NA	NA	False	NA	NA	NA	56189548	56163344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_22787.known	chr12	+	1034	8	FSM	ENSG00000196465.10	ENST00000550443.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	256.309443080517	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	NA	False	NA	18	True	AATAAA	-14	NA	56152438	56157976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56152632_56153808_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
transcript_22792.known	chr12	+	573	7	FSM	ENSG00000092841.19	ENST00000548400.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	6635.28016866407	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	20	False	NA	26	True	AATAAA	-15	NA	56158381	56161575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_22796.known	chr12	+	708	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	6307.19043808114	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	-3	True	NA	30	True	AATAAA	-19	NA	56158358	56161579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_22803.known	chr12	+	502	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_3	5504.80141694503	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	-5	True	NA	25	True	AATAAA	-14	NA	56158356	56161574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
transcript_22807.known	chr12	+	655	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	12145	junction_1	967.927063367897	10791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	0	True	NA	25	True	AATAAA	-14	NA	56158361	56161574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
transcript_22817.known	chr12	+	1438	5	FSM	ENSG00000092841.19	ENST00000551589.5	1438	5	0	0	0	0	multi-exon	FALSE	canonical	3	12145	junction_1	1072.44612335539	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTTGCAGTCTGGTAG	7	True	NA	NA	False	NA	NA	NA	56158368	56161298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242
transcript_22819.known	chr12	+	528	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_2	5717.81542090159	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	-16	True	NA	26	True	AATAAA	-15	NA	56158345	56161575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
transcript_22828.known	chr12	+	703	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	263.666146356892	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	10	True	NA	18	True	AATAAA	-14	NA	56152606	56157976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
transcript_22829.known	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	80.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	2553	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56157546_56157697_56157736_56157881
transcript_2283.known	chr1	+	7883	12	FSM	ENSG00000162521.19	ENST00000373493.10	7883	12	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_9	132.830594902488	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	32651207	32686211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_22830.known	chr12	+	221	2	FSM	ENSG00000196465.10	ENST00000549380.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGACTGCTATTTTTT	161	False	NA	23	True	AATAAA	-19	NA	56157614	56157981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56157736_56157881
transcript_22833.known	chr12	-	2452	8	FSM	ENSG00000181852.18	ENST00000394013.6	2452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.9237970219167	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTGATGTTCCTA	7177	False	NA	-6	True	AAAAAG	-22	NA	56221909	56205449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212995_56213139_56213957_56214071_56216428_56216614_56221759
transcript_22839.known	chr12	-	5593	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	30.4192921241329	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTTGATACACTGTCT	21	True	NA	-3	True	AGTAAA	-25	NA	56221922	56202178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
transcript_22840.known	chr12	-	1193	7	FSM	ENSG00000181852.18	ENST00000552656.5	1193	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	41.0991348922199	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTCGACTGGCTATCA	10	True	NA	NA	False	NA	NA	NA	56221933	56206446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221902
transcript_2285.known	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	591.445071606208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	25	True	NA	30	True	AATAAA	-21	NA	32651233	32680657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
transcript_22850.nic	chr12	-	1042	4	ISM	ENSG00000181852.18	ENST00000345093.9	5593	7	-49	7858	-38	0	5prime_fragment	FALSE	canonical	3	90	junction_3	40.077702307171	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-28	True	NA	-2	True	ATTAAA	-16	NA	56221971	56210036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221759
transcript_22851.nic	chr12	-	899	4	ISM	ENSG00000181852.18	ENST00000552656.5	1193	7	-38	3590	-38	0	5prime_fragment	FALSE	canonical	3	59	junction_3	54.6890198201512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-28	True	NA	-2	True	ATTAAA	-16	NA	56221971	56210036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221902
transcript_22857.known	chr12	+	663	7	FSM	ENSG00000139579.13	ENST00000399713.6	663	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	104.983199714155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACTGAGTGCCCCAC	10	True	NA	NA	False	NA	NA	NA	56222014	56229032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56222200_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22858.known	chr12	+	1400	7	FSM	ENSG00000139579.13	ENST00000267023.9	1400	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	56.9280735275273	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-31	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56224442_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22861.known	chr12	+	1411	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	91.3911009526274	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	28	True	NA	4	True	AATAAA	-4	NA	56224400	56229844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22867.known	chr12	+	1775	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	18.0709711969224	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-14	True	NA	14	True	AATAAA	-14	NA	56224358	56229854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_22872.nic	chr12	+	1306	6	NIC	ENSG00000135469.14	novel	1410	5	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	50.4919795611145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	-36	True	NA	NA	False	AATAAA	-16	NA	56267254	56270966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149_56270319_56270450
transcript_22873.known	chr12	+	1570	5	FSM	ENSG00000135469.14	ENST00000308197.10	1570	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	24.6322958735072	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	0	True	NA	NA	False	AATAAA	-16	NA	56266941	56270966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56267253_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_22874.known	chr12	+	1410	5	FSM	ENSG00000135469.14	ENST00000433805.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	28.0846933399672	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	-8	True	NA	NA	False	AATAAA	-16	NA	56267282	56270966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_22878.known	chr12	+	1369	4	FSM	ENSG00000135469.14	ENST00000546544.5	1369	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	2.49443825784929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGCTTTATTATATTG	-5	True	NA	NA	False	AATAAA	-14	NA	56267681	56270964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56267941_56269058_56269252_56269459_56269562_56270149
transcript_22879.known	chr12	-	4576	26	FSM	ENSG00000135473.16	ENST00000440411.8	4523	26	-53	0	0	0	multi-exon	TRUE	canonical	3	67	junction_14	16.6757308685407	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	8443	False	NA	-7	True	AATAAA	-29	NA	56334053	56316935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
transcript_22884.known	chr12	-	3057	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_11	337.031989555103	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	-15	True	NA	-2	True	AATAAA	-16	NA	56300391	56271700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
transcript_22889.known	chr12	-	2915	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_3	68.5922007228227	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	-3	True	NA	0	True	AATAAA	-18	NA	56300330	56271698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
transcript_2289.known	chr1	+	762	4	FSM	ENSG00000162521.19	ENST00000401893.7	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	139.452102490027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGTGCTGTTTAAGCA	1	True	NA	NA	False	NA	NA	NA	32651209	32668579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224
transcript_22899.known	chr12	-	1450	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	1434	junction_2	119.838891850684	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTCAATCTGGACTA	-14	True	NA	-16	True	AATAAA	-16	NA	56315988	56309843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
transcript_2290.known	chr1	+	501	3	FSM	ENSG00000162521.19	ENST00000525506.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAAGCCTGAGTTTGCA	9	True	NA	NA	False	AGTAAA	-31	NA	32651217	32657674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913_32652062_32657426
transcript_2291.known	chr1	+	690	2	FSM	ENSG00000162521.19	ENST00000465780.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACAATGAGTCTAGT	17	True	NA	NA	False	AAAAAG	-6	NA	32651225	32652506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32651323_32651913
transcript_22914.known	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1718	junction_1	24.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-15	True	NA	-14	True	AATAAA	-29	NA	56316047	56314489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56314967_56315129_56315243_56315820
transcript_22915.known	chr12	-	666	3	FSM	ENSG00000257727.6	ENST00000553164.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAATAAGAATAAAAGG	8165	False	NA	-32	True	AATAAA	-11	NA	56316000	56314507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56314967_56315129_56315243_56315906
transcript_22918.known	chr12	-	670	2	FSM	ENSG00000257727.6	ENST00000546388.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	1767	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAATTTGTTAGCAAA	20	True	NA	NA	False	NA	NA	NA	56315897	56314649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56315243_56315820
transcript_22920.known	chr12	+	1037	4	FSM	ENSG00000110944.9	ENST00000228534.6	1037	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0.471404520791032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	1	True	NA	12	True	AATAAA	-19	NA	56338883	56340410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56339207_56339425_56339525_56339690_56339838_56339942
transcript_22923.known	chr12	-	4376	29	FSM	ENSG00000111602.12	ENST00000229201.4	4376	29	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_23	144.004570505698	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACTTGGCGATATGT	6	True	NA	-6	True	ATTAAA	-27	NA	56449403	56417118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_22928.nic	chr12	-	1786	13	ISM	ENSG00000111602.12	ENST00000553532.6	5158	29	-30	11873	-30	-6684	5prime_fragment	FALSE	canonical	3	573	junction_7	88.3689786570428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGGCAGCCCCACAAT	-1	True	NA	0	True	NA	NA	NA	56449456	56428235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432525_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_22932.known	chr12	-	2387	18	FSM	ENSG00000135423.13	ENST00000311966.9	2387	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_14	9.19154116923511	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	5	True	NA	-8	True	AATAAA	-18	NA	56488161	56470951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
transcript_22933.known	chr12	-	2225	17	FSM	ENSG00000135423.13	ENST00000424141.6	2225	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	13.0862523283024	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	9	True	NA	-8	True	AATAAA	-18	NA	56488129	56470951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479779_56479902_56480287_56480388_56487936
transcript_22935.nnic	chr12	-	1704	12	NIC	ENSG00000135423.13	novel	2387	18	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	19.6300494898817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	5	True	NA	-8	True	AATAAA	-18	NA	56488133	56470951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56487936
transcript_22936.known	chr12	+	10769	2	FSM	ENSG00000176422.14	ENST00000338146.7	10769	2	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCTCTGAGAGTCTAT	3	True	NA	NA	False	AATAAA	-39	NA	56468577	56479708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56468677_56469038
transcript_22939.known	chr12	+	8488	14	FSM	ENSG00000076067.13	ENST00000262031.10	8488	14	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_7	4.40010758340772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTGATGGTGT	-1	True	NA	8	True	TATAAA	-33	NA	56521819	56596193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_22943.known	chr12	-	8938	29	FSM	ENSG00000076108.12	ENST00000549884.6	8938	29	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_28	40.7254370693526	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTTTTATTTAAAAA	-6	True	NA	NA	False	NA	NA	NA	56630326	56595595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601099_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519_56603701_56604216_56604292_56604584_56604800_56605072_56605328_56605829_56606064_56606246_56606313_56606632_56606734_56609735_56609947_56610113_56610216_56610408_56610518_56611572_56611634_56611772_56612247_56613014_56613234_56613952_56614139_56615013_56615608_56617394_56617533_56630124
transcript_22948.known	chr12	-	8600	29	FSM	ENSG00000076108.12	ENST00000551812.5	8600	29	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_28	48.0032418122963	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGACTCTGTGTATT	-17	True	NA	-8	True	AATAAA	-22	NA	56636379	56595929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601099_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519_56603701_56604216_56604292_56604584_56604800_56605072_56605328_56605829_56606064_56606246_56606313_56606632_56606734_56609735_56609947_56610113_56610216_56610408_56610518_56611572_56611634_56611772_56612247_56613014_56613234_56613952_56614139_56615013_56615608_56617394_56617533_56636181
transcript_22949.known	chr12	+	1452	13	FSM	ENSG00000076067.13	ENST00000550726.5	1452	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.8705400981683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTATTTGGGAATGCT	1	True	NA	-81	True	AAAAAG	-13	NA	56521998	56589503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56522090_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_22950.known	chr12	-	614	6	FSM	ENSG00000076108.12	ENST00000547650.1	614	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.7509420204116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAATGAAGGAAAAGGA	7016	False	NA	5	True	AAAAAG	-24	NA	56610479	56605991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56606064_56606246_56606313_56606632_56606734_56609735_56609938_56610113_56610216_56610408
transcript_22959.known	chr12	-	1759	10	FSM	ENSG00000110955.9	ENST00000262030.8	1759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3296	junction_7	471.832074124724	12127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	1	True	NA	-8	True	AATAAA	-18	NA	56645984	56638174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
transcript_2296.known	chr1	-	2443	13	FSM	ENSG00000134684.12	ENST00000373477.9	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_6	107.08106352977	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATGTGAGCTGGAC	-8	True	NA	-33	True	AATAAA	-16	NA	32817358	32775238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
transcript_22963.known	chr12	-	2077	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	1302.61179342696	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCATTTTGGCAGT	NA	False	NA	-9	True	AATAAA	-30	NA	56688408	56663342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
transcript_22975.known	chr12	-	1898	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	2925	junction_2	109.355066696724	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	3	True	NA	-15	True	AATAAA	-24	NA	56688284	56663348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_22984.known	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	1103.86291419421	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	0	True	NA	-37	True	TTTAAA	-22	NA	56688287	56663612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_22985.known	chr12	-	1017	7	FSM	ENSG00000110958.16	ENST00000448157.6	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	1128.27248728113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTTCATAACATAGA	3	True	NA	4	True	AATAAA	-19	NA	56688284	56664166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_22995.known	chr12	-	2939	8	FSM	ENSG00000110958.16	ENST00000537473.2	2939	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1370.03792588649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATTTTGGCAGTTT	352	False	NA	-7	True	AATAAA	-32	NA	56687997	56663340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56664499_56664775_56664801_56665631_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687249
transcript_23.known	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00062_+_0_1000
transcript_230.known	chr1	+	637	2	FSM	ENSG00000187608.10	ENST00000649529.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_1	0	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGCCTCTGTGTCTGTG	1	True	NA	9	True	AATAAA	-19	NA	1013496	1014540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1013577_1013983
transcript_23009.known	chr12	-	1875	14	FSM	ENSG00000198056.15	ENST00000672280.1	1875	14	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_5	101.870668674033	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAAGAAACA	-2	True	NA	NA	False	NA	NA	NA	56752374	56731295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56740011_56740129_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
transcript_23013.known	chr12	-	1459	13	FSM	ENSG00000198056.15	ENST00000552590.6	1459	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	86.6357316584791	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTTGAGAAATAATTTA	-1	True	NA	16	True	AATAAA	-42	NA	56752373	56731595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_23022.known	chr12	-	1074	8	FSM	ENSG00000196531.14	ENST00000552540.5	1074	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	3526.66397836915	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-1	True	NA	-11	True	AATAAA	-20	NA	56725256	56712434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56724961
transcript_23023.known	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	3428.40066836669	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	17	False	NA	-21	True	NA	NA	NA	56725516	56712503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
transcript_23027.known	chr12	-	1107	7	FSM	ENSG00000196531.14	ENST00000678416.1	1107	7	0	0	0	0	multi-exon	FALSE	canonical	2	75	junction_6	3730.3171633105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGCCACAGATTTCCC	1	True	NA	NA	False	NA	NA	NA	56725269	56712316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724961
transcript_23028.known	chr12	-	712	7	FSM	ENSG00000196531.14	ENST00000678376.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	3756.94106140739	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	15	True	NA	-4	True	AATAAA	-27	NA	56725286	56712427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56725262
transcript_2303.known	chr1	-	2248	12	FSM	ENSG00000134684.12	ENST00000675785.1	2248	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	340.375825345072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCCATAAGGCATCTCA	-30	True	NA	-103	True	AATGAA	-39	NA	32817380	32775308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32817187
transcript_23031.known	chr12	+	1547	6	FSM	ENSG00000025423.11	ENST00000554150.5	1547	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.39188744503053	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCATTTGTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	56752452	56787576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56752582_56763203_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_23032.known	chr12	+	1751	6	FSM	ENSG00000025423.11	ENST00000554643.5	1751	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.70454411370329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCAGCAGTCTTT	NA	False	NA	21	True	AATAAA	-23	NA	56752448	56787790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56752582_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_23035.known	chr12	+	1525	5	FSM	ENSG00000025423.11	ENST00000555159.5	1525	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.15475321515004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	NA	False	NA	-33	True	AAGAAA	-27	NA	56752160	56787736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_56752319_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_23041.known	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_7	3175.14970240035	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	3	True	NA	-11	True	AATAAA	-20	NA	56725267	56712434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
transcript_23042.known	chr12	-	844	9	FSM	ENSG00000196531.14	ENST00000550920.6	844	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	4221.00213219562	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	15	True	NA	-4	True	AATAAA	-27	NA	56725286	56712427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56719536_56719597_56724451_56724524_56725262
transcript_23043.known	chr12	-	827	8	FSM	ENSG00000196531.14	ENST00000548563.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	4472.36616824441	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATGAATTCAGTCGGTG	2	True	NA	-16	True	AATAAA	-15	NA	56725299	56712439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714704_56724451_56724550_56725262
transcript_23044.known	chr12	-	6268	2	FSM	ENSG00000166860.3	ENST00000300101.3	6268	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTTCTCTTCCTACCT	-28	True	NA	-15	True	AATAAA	-16	NA	57006546	56998835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57004962_57006404
transcript_23045.known	chr12	-	930	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	47.151514356619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	36	False	NA	-2	True	AATAAA	-18	NA	57016538	57009999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_23046.known	chr12	-	804	7	FSM	ENSG00000166863.13	ENST00000458521.7	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	7.47031161033832	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-1	True	NA	-2	True	AATAAA	-18	NA	57016529	57009999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_23049.known	chr12	-	5617	9	FSM	ENSG00000166881.10	ENST00000300128.9	5617	9	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	34.0328425935889	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	1	True	NA	-3	True	AATAAA	-14	NA	57078791	57055642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57069233_57069307_57070673_57070894_57072787_57072913_57078618
transcript_23052.known	chr12	-	5370	8	FSM	ENSG00000166881.10	ENST00000379391.7	5370	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	59.8781074776252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-7	True	NA	-3	True	AATAAA	-14	NA	57078763	57055642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57070819_57070894_57072787_57072913_57078618
transcript_23055.nic	chr12	-	2841	3	ISM	ENSG00000166881.10	ENST00000379391.7	5370	8	-31	12711	-3	2320	5prime_fragment	FALSE	canonical	3	235	junction_2	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTTTATTCATTTTT	-2	True	NA	NA	False	TTTAAA	-15	NA	57078794	57068353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_57070894_57072787_57072913_57078618
transcript_23058.known	chr12	-	4018	23	FSM	ENSG00000166888.12	ENST00000553533.2	4018	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	30.1826738651978	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCCTAAGCCATAAAATAAA	373	False	NA	NA	False	NA	NA	NA	57111433	57095477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57100845_57100900_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111128
transcript_23059.known	chr12	-	3963	22	FSM	ENSG00000166888.12	ENST00000300134.8	3963	22	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_19	12.9153883501747	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACGCTCTAACTGCTC	5	True	NA	NA	False	AATAAA	-26	NA	57111362	57095407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111128
transcript_23060.known	chr12	-	3380	21	FSM	ENSG00000166888.12	ENST00000554764.6	3380	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_19	22.7916651432053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGCATGACCACATAG	5	True	NA	-20	True	NA	NA	NA	57111362	57095851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57108162_57108300_57111128
transcript_23063.known	chr12	+	1693	7	FSM	ENSG00000123384.14	ENST00000553277.5	1693	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	9.59890039998795	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTCAGACGCCTGA	-10	True	NA	NA	False	AATAAA	-22	NA	57128492	57150059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57149679
transcript_23066.known	chr12	+	2157	12	FSM	ENSG00000182199.11	ENST00000328923.8	2157	12	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_5	57.4884824972334	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	-11	True	NA	29	True	AATGAA	-16	NA	57229710	57234935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_23071.known	chr12	+	2006	12	FSM	ENSG00000182199.11	ENST00000414700.7	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	315.697731780321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	75	False	NA	34	True	AATAAA	-13	NA	57230085	57234726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57230245_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_23073.known	chr12	+	2121	12	FSM	ENSG00000182199.11	ENST00000449049.7	2121	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	336.377984951944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATCTAATAAAATGCT	4	True	NA	7	True	NA	NA	NA	57230359	57234699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_23076.known	chr12	+	1765	12	FSM	ENSG00000182199.11	ENST00000553474.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	326.457925098326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACTTAGAAGGAGGGC	15	False	NA	NA	False	NA	NA	NA	57230327	57234551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57230421_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_23081.known	chr12	+	2215	11	FSM	ENSG00000182199.11	ENST00000556825.5	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	319.216055360629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	3422	False	NA	29	True	AATGAA	-16	NA	57229572	57234935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57229812_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_23083.known	chr12	+	2311	11	FSM	ENSG00000182199.11	ENST00000555774.5	2311	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	522.42500897258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	4	True	NA	29	True	AATGAA	-16	NA	57230359	57234935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57230667_57230802_57231001_57231712_57231914_57232210_57232293_57232424_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_23086.known	chr12	-	701	1	FSM	ENSG00000276727.1	ENST00000617433.1	701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGCCCCCTCTCCTTAC	6924	False	NA	NA	False	AAAACA	-22	NA	57230198	57229497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57229500_57230200
transcript_23087.known	chr12	+	1918	12	FSM	ENSG00000182199.11	ENST00000557487.5	1918	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	338.11186959886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	-11	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232482_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_23089.nic	chr12	-	1266	10	ISM	ENSG00000185482.8	ENST00000332782.7	1645	12	1996	0	-827	0	3prime_fragment	TRUE	canonical	1	1	junction_3	1.63299316185545	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTTGTTATTTAACTG	5308	False	NA	-5	True	ATTAAA	-17	NA	57249191	57243457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_57243911_57244087_57244226_57244314_57244367_57244536_57244623_57244915_57244966_57245144_57245212_57246803_57246902_57248125_57248199_57248705_57248804_57249040
transcript_23095.known	chr12	+	2797	21	FSM	ENSG00000166986.15	ENST00000262027.10	2797	21	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_9	80.0520299555233	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	-6	True	NA	18	True	AATAAA	-22	NA	57488067	57516652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
transcript_2311.known	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	347.176093647014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-7	True	NA	-77	True	NA	NA	NA	32817357	32775282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
transcript_23117.known	chr12	+	2979	19	FSM	ENSG00000166986.15	ENST00000545888.6	2979	19	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	386.333065701502	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGACCTTTCCTTTTGT	-8	True	NA	21	True	AATAAA	-25	NA	57488065	57516655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57516338_57516434
transcript_23129.known	chr12	-	1439	16	FSM	ENSG00000175203.17	ENST00000549394.5	1439	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	248.955328433748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTTACTATAACTCTAG	110	False	NA	NA	False	NA	NA	NA	57547120	57530616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538252_57538348_57541363_57541373_57546027_57546097_57547027
transcript_23130.known	chr12	-	1677	16	FSM	ENSG00000175203.17	ENST00000434715.7	1677	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	250.52261818491	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTCTGCTGTGTTTC	36	True	NA	-4	True	ATTAAA	-16	NA	57547141	57530310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57541363_57541373_57546027_57546097_57547027
transcript_23134.known	chr12	-	1705	15	FSM	ENSG00000175203.17	ENST00000543672.6	1705	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	219.715307447002	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	0	True	NA	-3	True	ATTAAA	-17	NA	57547177	57530309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57546027_57546097_57547027
transcript_23140.known	chr12	-	1677	13	FSM	ENSG00000175203.17	ENST00000678322.1	1677	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	174.047806331734	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	6	True	NA	-3	True	ATTAAA	-17	NA	57547224	57530309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57547027
transcript_23141.known	chr12	-	1527	13	FSM	ENSG00000175203.17	ENST00000550201.5	1527	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	173.859857356435	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTACAACTGTTTCTGA	25	True	NA	-47	True	NA	NA	NA	57547152	57530353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_23153.known	chr12	-	872	4	FSM	ENSG00000175197.13	ENST00000547303.5	872	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	40.9986449640581	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTTACTTTTTCTTCT	20	False	NA	-2	True	ATTAAA	-20	NA	57520492	57516587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517425_57517705_57517754_57520417
transcript_23154.known	chr12	-	903	4	FSM	ENSG00000175197.13	ENST00000346473.8	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	22.4845626053867	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTCTTTTACTTTTT	-2	True	NA	-7	True	ATTAAA	-15	NA	57520514	57516592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517439_57517705_57517754_57520417
transcript_23156.known	chr12	-	644	4	FSM	ENSG00000175197.13	ENST00000547526.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2493523272593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAACAGGAGAATGAAAG	1	True	NA	NA	False	NA	NA	NA	57520511	57516952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517543_57517705_57517754_57520417
transcript_23157.known	chr12	-	1067	4	FSM	ENSG00000175197.13	ENST00000551116.5	1067	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2493523272593	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTTACTTTTTCTTC	-5	True	NA	-3	True	ATTAAA	-19	NA	57520517	57516588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517596_57517705_57517754_57520417
transcript_23160.known	chr12	-	951	3	FSM	ENSG00000175197.13	ENST00000552740.5	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGGAGCATCAGTCC	1	True	NA	NA	False	NA	NA	NA	57520511	57516808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57517181_57517268_57517754_57520417
transcript_23161.known	chr12	+	2460	2	FSM	ENSG00000139269.3	ENST00000266646.3	2460	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGTTACAGTCTT	12	True	NA	42	True	NA	NA	NA	57455306	57458025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57455835_57456093
transcript_23164.known	chr12	-	211	2	FSM	ENSG00000175203.17	ENST00000549712.1	211	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGTGTGCTGCCAC	3	True	NA	NA	False	NA	NA	NA	57547174	57546027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57546092_57547027
transcript_23165.known	chr12	-	1973	14	FSM	ENSG00000175203.17	ENST00000548249.6	1973	14	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_8	35.6508379778191	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGTCTTGTCTTTACA	-15	True	NA	NA	False	ATTAAA	-5	NA	57547192	57530050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_23166.known	chr12	-	1902	14	FSM	ENSG00000175203.17	ENST00000678521.1	1902	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	167.212368954455	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGAGTTTCAAAATAT	8	True	NA	-2	True	AATAAA	-18	NA	57547222	57530152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532808_57532979_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_23167.known	chr12	+	2876	11	FSM	ENSG00000166908.18	ENST00000540759.6	2876	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	61.8922450715758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	-27	True	NA	18	True	AATAAA	-15	NA	57591202	57603418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525_57601637_57601925
transcript_23168.known	chr12	+	3176	10	FSM	ENSG00000166908.18	ENST00000354947.10	3176	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	19.1472526475893	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	-38	True	NA	18	True	AATAAA	-15	NA	57591191	57603418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_23178.nic	chr12	+	2571	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-114	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	42.3070784726255	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	1538	False	NA	19	True	AATAAA	-25	NA	57604507	57609802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_23179.nic	chr12	+	2438	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9388514974953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	-7	True	NA	19	True	AATAAA	-25	NA	57604621	57609802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_23181.known	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.460599195766	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	-2	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_23182.nic	chr12	+	2204	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	48.0118619602374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	0	True	NA	19	True	AATAAA	-25	NA	57604628	57609802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_23183.nic	chr12	+	2123	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	52.4044103317862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	1	True	NA	19	True	AATAAA	-25	NA	57604608	57609802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_23186.known	chr12	+	2067	6	FSM	ENSG00000178498.16	ENST00000548804.5	2067	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	40.1875602643405	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	-7	True	NA	17	True	AATAAA	-23	NA	57604621	57609800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_23187.known	chr12	+	1840	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	51.6139516022558	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	8	True	NA	21	True	AATAAA	-27	NA	57604833	57609804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_23200.nnic	chr12	+	900	4	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	62.1950337424317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTATGCCACACCCGTT	-7	True	NA	14	True	AATAAA	-20	NA	57604818	57609797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_57604859_57606189_57606253_57606442_57606519_57609076
transcript_23204.known	chr12	+	2091	15	FSM	ENSG00000135506.16	ENST00000389146.10	2091	15	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_13	147.716150858631	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACCTCTCGGGCAAC	3	True	NA	NA	False	NA	NA	NA	57694144	57721024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_23205.known	chr12	+	2682	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	189.599362782017	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	-10	True	NA	25	True	AATAAA	-16	NA	57694131	57721557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_23206.known	chr12	+	2457	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_11	112.3457259097	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	5	True	NA	25	True	AATAAA	-16	NA	57694146	57721557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
transcript_23207.known	chr12	+	2505	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	192.29686123345	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	3	True	NA	23	True	AATAAA	-14	NA	57694144	57721555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_23223.known	chr12	-	1865	8	FSM	ENSG00000135446.17	ENST00000257904.11	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	1407	junction_3	80.1139494592495	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	-10	True	NA	NA	False	AATATA	-15	NA	57752310	57747726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57751499_57751737_57752174
transcript_23228.known	chr12	-	1650	7	FSM	ENSG00000135446.17	ENST00000312990.10	1650	7	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	570.886956118868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	NA	False	NA	NA	False	AATATA	-15	NA	57752447	57747726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750672_57751296_57751343_57751499_57751737_57752174
transcript_23229.known	chr12	-	776	7	FSM	ENSG00000135446.17	ENST00000546489.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	532.181673240758	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCTCTGCCTTTCGAGC	-22	True	NA	NA	False	NA	NA	NA	57752322	57748590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57752174
transcript_23234.known	chr12	+	3678	6	FSM	ENSG00000135452.10	ENST00000257910.8	3678	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	13.7462722219517	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTTCCTAATTCCAG	-9	True	NA	NA	False	AATAAA	-45	NA	57745038	57750219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746588_57746721_57747017_57747132_57747215
transcript_23248.known	chr12	+	1500	2	FSM	ENSG00000255737.2	ENST00000542466.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCACATTTTGCGCTTG	-16	True	NA	33	True	TATAAA	-28	NA	57726270	57728356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57726379_57726964
transcript_23253.known	chr12	+	2246	7	FSM	ENSG00000257921.6	ENST00000651284.1	2246	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	170.672607318482	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAGTTATTAAACAT	1	True	NA	-17	True	AAAACA	-25	NA	57772659	57797554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57772902_57773016_57773129_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_23255.known	chr12	+	2534	7	FSM	ENSG00000123297.20	ENST00000651066.1	2534	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	173.947709256419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAAGCATTGTTTTTT	17	True	NA	0	True	ATTAAA	-16	NA	57782789	57797571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57783614_57784171_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_23256.known	chr12	+	1218	7	FSM	ENSG00000123297.20	ENST00000323833.12	1218	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	168.738127154344	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTGGATTTAGCTTT	3	True	NA	20	True	AATAAA	-22	NA	57782775	57796734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57791964_57792028_57792985_57793074_57796176
transcript_23259.known	chr12	+	770	7	FSM	ENSG00000123297.20	ENST00000497617.1	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	189.478890644842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGGGCAGCATGTGGT	108	False	NA	NA	False	AAAACA	-22	NA	57782880	57796367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782908_57783109_57783284_57783614_57783653_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_23264.nic	chr12	-	1346	7	NIC	ENSG00000037897.17	novel	1378	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	101.683605146334	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACCACTTCTGTTTGCT	-7	True	NA	-8	True	NA	NA	NA	57772114	57768637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771479_57771606_57771973
transcript_23266.known	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	22.5690052948729	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	14	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_23267.known	chr12	+	651	6	FSM	ENSG00000123297.20	ENST00000543727.5	651	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	150.520961995331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTAAGCACCTTAAAA	26	True	NA	NA	False	NA	NA	NA	57782798	57802631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57802554
transcript_23269.known	chr12	+	689	6	FSM	ENSG00000123297.20	ENST00000457189.1	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	150.041860825571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCAGAGTCCCTCAC	45	False	NA	NA	False	NA	NA	NA	57782817	57796261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782908_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_23271.known	chr12	-	2474	8	FSM	ENSG00000111012.10	ENST00000547344.5	2474	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.74278606921194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTATTTCTCTCAT	5012	False	NA	1	True	AATAAA	-20	NA	57767095	57762333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57763256_57763610_57763809_57764097_57764177_57764377_57764551_57764753_57764927_57765010_57765500_57766006_57766198_57766846
transcript_23272.known	chr12	-	1378	6	FSM	ENSG00000037897.17	ENST00000324871.12	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_4	19.1164850325576	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCTGGAGAGTCC	2	True	NA	2	True	NA	NA	NA	57772105	57768470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771973
transcript_23279.known	chr12	+	1935	5	FSM	ENSG00000123297.20	ENST00000540550.6	1935	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	151.616292000563	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	-12	True	NA	16	True	ATTAAA	-32	NA	57782760	57797587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_23281.known	chr12	+	1085	5	FSM	ENSG00000123297.20	ENST00000651899.1	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	176.570630343781	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATACTGGATTTAGCTT	3	True	NA	19	True	AATAAA	-21	NA	57782775	57796733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57782878_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_23282.known	chr12	-	1096	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	104.965172795552	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCTGCCATTTCTC	-12	True	NA	-22	True	NA	NA	NA	57772119	57768581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
transcript_23288.known	chr12	+	836	3	FSM	ENSG00000123427.17	ENST00000551420.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTTGTTACCCCAGATA	6465	False	NA	NA	False	AAAAAG	-37	NA	57772199	57780780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57772398_57773016_57773129_57780254
transcript_23289.known	chr12	+	2687	3	FSM	ENSG00000123427.17	ENST00000300209.13	2687	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTGTTGTTTTG	0	True	NA	12	True	AATAAA	-19	NA	57772613	57782541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57772902_57773016_57773129_57780254
transcript_23291.known	chr12	-	2372	9	FSM	ENSG00000111012.10	ENST00000228606.9	2372	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.8309518948453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTATTTCTCTCAT	-5	True	NA	1	True	AATAAA	-20	NA	57767078	57762333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57763256_57763610_57763809_57764097_57764177_57764377_57764551_57764753_57764927_57765010_57765212_57765296_57765500_57766006_57766198_57766846
transcript_23293.known	chr12	-	4785	8	FSM	ENSG00000175215.11	ENST00000398073.7	4785	8	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_5	31.7747171987608	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTGCCACCAACCTT	-17	True	NA	-10	True	AATAAA	-28	NA	57846729	57819926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
transcript_23296.known	chr12	+	3134	6	FSM	ENSG00000166896.9	ENST00000300145.4	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	11.1642285895623	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGGTCTTCAAATT	31	True	NA	NA	False	AATAGA	-34	NA	57941566	57959148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57941889_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_23298.nnic	chr12	+	939	6	NNC	ENSG00000166896.9	novel	3134	6	NA	NA	79	201	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	34.7470862087744	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTGTTTTTATTACAT	-1	True	NA	17	True	AATAAA	-23	NA	57941645	57957141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_57941780_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_23299.known	chr12	+	519	4	FSM	ENSG00000166896.9	ENST00000549257.5	519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.026446699932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAATGACATTTTTATAT	124	False	NA	NA	False	AATATA	-4	NA	57941795	57956890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_57941889_57951757_57951896_57953605_57953690_57956686
transcript_23300.known	chr12	-	2214	3	FSM	ENSG00000257698.3	ENST00000659090.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATATATGTTGATACAA	5016	False	NA	NA	False	AAAACA	-42	NA	57936345	57930114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57931738_57935469_57935554_57935838
transcript_23301.known	chr12	-	451	2	FSM	ENSG00000257698.3	ENST00000551421.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	5282	False	57936095	-5	True	AATAAA	-14	NA	57936079	57931527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_57931738_57935838
transcript_23302.known	chr12	-	4046	19	FSM	ENSG00000139263.12	ENST00000320743.8	4046	19	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_13	35.6705172722395	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAGCCCCATTTATACA	-10	True	NA	-22	True	AATAAA	-15	NA	58920504	58872154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_58872817_58874054_58874331_58874429_58874574_58876444_58876604_58877399_58877853_58878823_58879106_58880580_58880902_58882868_58883033_58883519_58883592_58885830_58885903_58886809_58886891_58887788_58887933_58888328_58888473_58888818_58888963_58889995_58890140_58890664_58890797_58913981_58914057_58914264_58914337_58919999
transcript_23318.nnic	chr12	-	1676	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTGCTTTCTTTCT	-6	True	NA	0	True	AATATA	-26	NA	59328609	59319555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_2332.known	chr1	+	4220	7	FSM	ENSG00000116497.18	ENST00000373475.10	4220	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	57.5403240248861	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	0	True	NA	20	True	AATAAA	-17	NA	32817652	32858875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
transcript_23321.nnic	chr12	-	1363	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACATCTGTGACTTAT	-6	True	NA	-8	True	ACTAAA	-13	NA	59328609	59319868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_23323.nnic	chr12	-	3111	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-7	True	NA	-3	True	AGTAAA	-20	NA	59328610	59320075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59326402
transcript_23325.nnic	chr12	-	1156	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-6	True	NA	-3	True	AGTAAA	-20	NA	59328609	59320075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_23327.nnic	chr12	-	1088	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTCTTAATGTCATTTT	-6	True	NA	-16	True	ATTAAA	-27	NA	59328609	59320143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_23329.nnic	chr12	-	3037	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTACCAACTCTTAATGT	-7	True	NA	-22	True	ATTAAA	-21	NA	59328610	59320149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59326402
transcript_23332.nnic	chr12	-	593	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTCCCAAGATAGCCT	-6	True	NA	-29	True	TATAAA	-12	NA	59328609	59320638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59320979_59328356
transcript_23334.nnic	chr12	-	631	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTTTCTAAAAAAATT	NA	False	NA	-18	True	AATAAA	-14	NA	59328653	59321849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59322184_59328356
transcript_23337.nnic	chr12	-	557	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	NA	False	NA	-14	True	AATAAA	-13	NA	59328653	59321923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_-_59322184_59328356
transcript_2334.known	chr1	+	3320	7	FSM	ENSG00000116497.18	ENST00000373476.5	3320	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	122.948046841836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTTACTGTTTTT	499	False	NA	2	True	AATAAA	-15	NA	32817441	32857854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32817600_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
transcript_23340.known	chr12	+	11936	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.49799919935936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAAATGAAATCTATA	-23	True	NA	NA	False	AATAAA	-16	NA	59596028	59789841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
transcript_23343.known	chr12	+	2250	6	FSM	ENSG00000118596.12	ENST00000552432.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTTATTTTTAAGGT	15	True	NA	NA	False	AATAAA	-22	NA	59596066	59780213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_59596237_59655151_59655251_59704791_59705019_59771218_59771363_59774656_59775476_59779422
transcript_23345.known	chr12	+	14971	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	32.9366188561911	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	10	True	NA	NA	False	ATTAAA	-15	NA	62260403	62416389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_23346.known	chr12	+	14950	21	FSM	ENSG00000135655.16	ENST00000353364.7	14950	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	30.6551790077957	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	222	False	NA	NA	False	ATTAAA	-15	NA	62260337	62416389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_23347.known	chr12	+	2226	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	63.4229628937518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	3	True	NA	NA	False	AATAAA	-15	NA	62260396	62336690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
transcript_23348.known	chr12	+	579	4	FSM	ENSG00000135655.16	ENST00000537297.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	88.5299698156255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAATAATATGGAAAT	14	True	NA	NA	False	ATTAAA	-21	NA	62260407	62304896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62304672
transcript_23349.known	chr12	+	648	4	FSM	ENSG00000135655.16	ENST00000548524.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	10.2089285540757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTGTATGCTTTTG	5	True	NA	NA	False	NA	NA	NA	62260398	62315073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789
transcript_23350.known	chr12	+	13263	35	FSM	ENSG00000061987.16	ENST00000393630.8	13263	35	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_27	21.308838752887	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTTTAGACCCTGTTT	5	True	NA	NA	False	ATTAAA	-18	NA	62466825	62600476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
transcript_23351.known	chr12	+	491	1	FSM	ENSG00000275180.1	ENST00000619323.1	491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGAATGGTTTTGTTT	182	False	NA	13	True	AATAAA	-15	NA	62603908	62604399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62603900_62604400
transcript_23352.known	chr12	+	645	1	FSM	ENSG00000139239.7	ENST00000484568.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGGCAATCATAAAAAG	21	False	NA	NA	False	AAGAAA	-4	NA	62965324	62965969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_62965300_62966000
transcript_23357.known	chr12	+	1966	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	28.2729552753157	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGAGAGGTTTAATT	9	False	NA	87	True	AATAAA	-22	NA	63780125	63809558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_23361.known	chr12	-	4159	3	FSM	ENSG00000174206.13	ENST00000398055.8	4159	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCAGACTGCTTTCT	-26	True	NA	-8	True	ATTAAA	-17	NA	64222296	64191079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64194659_64215677_64215964_64222002
transcript_23363.known	chr12	-	574	1	FSM	ENSG00000174206.13	ENST00000615991.1	574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCTTCATTGTTTTAA	-2	True	NA	NA	False	CATAAA	-17	NA	64222272	64221698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64221700_64222300
transcript_23364.known	chr12	-	2698	4	FSM	ENSG00000174206.13	ENST00000311915.12	2698	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.9771087709958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGATGTAAGTGTTTTT	5	True	NA	NA	False	ATTAAA	-15	NA	64222265	64186315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64187653_64193846_64194659_64215677_64215964_64222002
transcript_23365.known	chr12	-	935	7	FSM	ENSG00000185306.13	ENST00000542397.5	935	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3.5939764421413	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64293383	64266982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
transcript_23366.known	chr12	+	6370	25	FSM	ENSG00000184575.12	ENST00000332707.10	6370	25	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_10	89.5776257871723	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGAGTGGACTTTTG	-7	True	NA	20	True	AATAAA	-20	NA	64404391	64451125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64404805_64409961_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069_64420255_64420352_64420522_64421234_64421472_64423004_64423044_64423181_64423245_64424598_64424724_64425037_64425183_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413_64433604_64434506_64434624_64434793_64434910_64435626_64435675_64439243_64439316_64445074_64445132_64448104
transcript_23369.known	chr12	+	3092	22	FSM	ENSG00000183735.11	ENST00000652537.1	3092	22	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_16	63.7491185302094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTTCTTTAATTCTG	-35	True	NA	-51	True	ATTAAA	-30	NA	64452091	64502048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23372.known	chr12	+	3022	21	FSM	ENSG00000183735.11	ENST00000331710.10	3022	21	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	19.3480619184455	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCATGTGTTTCTTTGT	-7	True	NA	15	True	AATAAA	-21	NA	64452119	64502114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23373.known	chr12	+	3204	20	FSM	ENSG00000183735.11	ENST00000676654.1	3204	20	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	19.8491541297757	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTAATTCTGCTTAC	-37	True	NA	-46	True	ATTAAA	-35	NA	64452089	64502053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64498040_64501329
transcript_23376.known	chr12	+	1075	2	FSM	ENSG00000183735.11	ENST00000679065.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTGTTTAGATTCAAT	2	True	NA	NA	False	ATTAAA	-14	NA	64452128	64456855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839
transcript_23377.known	chr12	+	3001	21	FSM	ENSG00000183735.11	ENST00000677641.1	3001	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	51.1324505573515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	-37	True	NA	-33	True	NA	NA	NA	64452089	64502066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495773_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23378.known	chr12	+	3108	22	FSM	ENSG00000183735.11	ENST00000677499.1	3108	22	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_18	75.2238383116691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	-37	True	NA	-33	True	NA	NA	NA	64452089	64502066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497166_64497260_64497647_64497755_64497967_64498040_64501329
transcript_23379.known	chr12	+	1261	4	FSM	ENSG00000183735.11	ENST00000678430.1	1261	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	18.006171781426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGCAAGAATATGGAG	-7	True	NA	NA	False	AAAACA	-2	NA	64452119	64465267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333
transcript_23380.known	chr12	-	544	2	FSM	ENSG00000135677.11	ENST00000540883.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACCTGTCATCAGAATG	1216	False	NA	NA	False	NA	NA	NA	64729218	64722832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_64723114_64728955
transcript_23381.known	chr12	-	1977	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	6.05530070819498	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTGGAGGTGATCT	6	True	NA	-3	True	AATAAA	-22	NA	65121305	65050625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
transcript_23388.known	chr12	-	770	7	FSM	ENSG00000155957.19	ENST00000542724.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.584432297981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAGAAAAAAGGATT	-23	True	NA	-103	True	ATTAAA	-36	NA	66169999	66137919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138735_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_23389.known	chr12	-	2876	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	20.0637871688163	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCACATCTTGCA	-20	True	NA	NA	False	NA	NA	NA	66169996	66135845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_23391.known	chr12	-	2240	7	FSM	ENSG00000155957.19	ENST00000544599.5	2240	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	108.660659343154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTATGGTTTCATTTG	548	False	NA	-2	True	ATTAAA	-15	NA	66169511	66136936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914
transcript_23395.known	chr12	-	7728	3	FSM	ENSG00000139233.7	ENST00000266604.7	7728	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	60	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATCTGCATACCTT	-1	True	NA	-13	True	AATAAA	-17	NA	66130750	66116554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66124019_66128895_66129114_66130704
transcript_23398.known	chr12	-	220	2	FSM	ENSG00000155957.19	ENST00000542072.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCCGCCCTGTCTGGGA	-13	True	NA	NA	False	NA	NA	NA	66169989	66161087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_66161173_66169854
transcript_234.nnic	chr1	+	954	4	NIC	ENSG00000217801.11	novel	957	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	-11	True	NA	21	True	NA	NA	NA	1059692	1066456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_1059783_1060279_1060394_1063078_1063202_1065829
transcript_23400.known	chr12	+	11176	15	FSM	ENSG00000111530.13	ENST00000545606.6	11176	15	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_6	85.9971819661694	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCCATCTTGAAGCA	-19	True	NA	11	True	AATAAA	-16	NA	67269357	67319953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_67269786_67281909_67282054_67292621_67292777_67295032_67295157_67297406_67297664_67297747_67297854_67298949_67299096_67302322_67302616_67304604_67304747_67305103_67306598_67307396_67307493_67309900_67310071_67310151_67310317_67311692_67311801_67312605
transcript_23403.known	chr12	+	568	2	FSM	ENSG00000127334.11	ENST00000543747.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTTTGGGCAGGTGG	NA	False	NA	NA	False	NA	NA	NA	67648337	67657596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_67648415_67657105
transcript_23404.nnic	chr12	-	2850	15	NNC	ENSG00000111554.15	novel	2980	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	28.6103306588401	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTCTCCAGAAAGTT	13	True	NA	0	True	AATAAA	-16	NA	68332291	68294565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68325171_68325248_68326656_68327022_68331106_68331222_68332227
transcript_23406.nnic	chr12	-	3040	15	NNC	ENSG00000111554.15	novel	2980	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	21	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTCTCCAGAAAGTT	-11	True	NA	0	True	AATAAA	-16	NA	68332376	68294565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325171_68325248_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_23407.known	chr12	-	2472	14	FSM	ENSG00000111554.15	ENST00000411698.6	2472	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	27.4446187911531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATTTGTTGTTCCT	18	True	NA	-47	True	NA	NA	NA	68332286	68294862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68326656_68327022_68331106_68331222_68332227
transcript_23409.known	chr12	-	2918	14	FSM	ENSG00000111554.15	ENST00000303145.11	2918	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	10.4411566159736	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTCTCCAGAAAG	-28	True	NA	-2	True	AATAAA	-14	NA	68332332	68294567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_23413.known	chr12	-	2170	3	FSM	ENSG00000111554.15	ENST00000430606.3	2170	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTATTCTAAAATGT	NA	False	NA	-17	True	ATTAAA	-12	NA	68332381	68325120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68327022_68331106_68331222_68332227
transcript_23416.known	chr12	+	1072	9	FSM	ENSG00000127314.18	ENST00000537460.5	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	333.600785932827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGCACATTCTAATCAC	25	True	NA	NA	False	NA	NA	NA	68610907	68659401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611044_68624670_68624874_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_23418.known	chr12	+	13378	8	FSM	ENSG00000127314.18	ENST00000250559.14	13378	8	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_1	73.5271711543371	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATGACTGTATTATT	16	True	NA	NA	False	AATAAA	-23	NA	68610898	68671901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_23420.known	chr12	+	2049	8	FSM	ENSG00000127314.18	ENST00000393436.9	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	212.50507797054	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGCCACTTGAATGTG	-25	True	NA	31	True	AATAAA	-33	NA	68610857	68660522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611053_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_23421.known	chr12	+	1060	7	FSM	ENSG00000127314.18	ENST00000542145.5	1060	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	285.818561328686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCGCTTTGATTAA	-4	True	NA	NA	False	AAGAAA	-23	NA	68610928	68659754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68656305_68656450_68657100_68657218_68659279
transcript_23423.known	chr12	+	977	6	FSM	ENSG00000127314.18	ENST00000539091.5	977	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	337.289549200683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCCAAAGAGCTCCTAT	-4	True	NA	NA	False	AATAAA	-3	NA	68610928	68659647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611053_68648698_68648782_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_23424.known	chr12	+	571	6	FSM	ENSG00000127314.18	ENST00000540781.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	317.692933506554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGCATTCTTAGAATC	-4	True	NA	NA	False	NA	NA	NA	68610928	68656398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68611057_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305
transcript_23427.known	chr12	+	6213	28	FSM	ENSG00000111581.10	ENST00000229179.9	6213	28	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_19	85.0500215922342	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAATAAGTTCTTTCCC	-14	True	NA	10	True	AATAAA	-14	NA	68686977	68745809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_2343.known	chr1	+	417	2	FSM	ENSG00000116497.18	ENST00000474103.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGCTGTGTGCTTCAC	85	False	NA	NA	False	GATAAA	-15	NA	32817737	32818832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_32817847_32818524
transcript_23435.known	chr12	+	2859	26	FSM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_20	195.292781228595	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTCTCTTTTTCATG	2377	False	NA	29	True	AATAAA	-40	NA	68686950	68742692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_23439.nic	chr12	+	2472	25	ISM	ENSG00000111581.10	ENST00000229179.9	6213	28	-11	10991	-4	1293	5prime_fragment	FALSE	canonical	3	747	junction_19	75.3801361802667	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAATATGAAGTAAG	-25	True	NA	NA	False	NA	NA	NA	68686966	68734818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707
transcript_2344.known	chr1	-	1563	2	FSM	ENSG00000160097.20	ENST00000481487.1	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGTCTTCTGGTAAA	7772	False	NA	-1	True	AATAAA	-19	NA	32864717	32862267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_32863777_32864663
transcript_23441.nic	chr12	+	1631	11	ISM	ENSG00000111581.10	ENST00000378905.6	2859	26	23	28314	3	0	5prime_fragment	FALSE	canonical	3	768	junction_9	75.1519128166409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTCTTAACAGCTTA	-18	True	NA	NA	False	AAAAAG	-19	NA	68686973	68714378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729
transcript_23448.known	chr12	+	573	3	FSM	ENSG00000111581.10	ENST00000540453.5	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCATGCCTATAATCTC	-21	True	NA	NA	False	AATATA	-32	NA	68686970	68689910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68687074_68688961_68689054_68689532
transcript_23450.known	chr12	-	1733	3	FSM	ENSG00000247363.3	ENST00000500695.2	1733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTATTTCTGTCATAAAA	-22	True	NA	NA	False	AATAAA	-16	NA	68686859	68674370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68675822_68685858_68686018_68686736
transcript_23455.known	chr12	+	3728	5	FSM	ENSG00000175782.11	ENST00000319429.7	3728	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	55.4639522572995	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTTGGGAAGATCCT	12	True	NA	NA	False	AATAAA	-18	NA	68746134	68762769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68760039
transcript_23457.known	chr12	+	17722	5	FSM	ENSG00000175782.11	ENST00000398004.4	17722	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	12.1449578014911	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTCTTTCATTAAT	9	True	NA	NA	False	AATAAA	-17	NA	68746175	68781468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68764703
transcript_23462.known	chr12	+	3522	5	FSM	ENSG00000175782.11	ENST00000674096.1	3522	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	76.2540982505203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTTCTGCTTTTCAT	2	True	NA	NA	False	AATACA	-35	NA	68746124	68767158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156_68759240_68764703
transcript_23465.nic	chr12	+	1935	4	ISM	ENSG00000175782.11	ENST00000319429.7	3728	5	15	2578	15	-2578	intron_retention	FALSE	canonical	3	129	junction_2	11.5181016954473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATGAAGTTATATGTT	-17	True	NA	NA	False	AAAAAG	-7	NA	68746149	68760191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156
transcript_23472.known	chr12	-	6627	9	FSM	ENSG00000135678.12	ENST00000551568.6	6627	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.11763429326218	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTTTCCCATTAT	15	True	NA	NA	False	AATAAA	-20	NA	68933171	68851174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_68856680_68858922_68859072_68866895_68867049_68869324_68869496_68870214_68870400_68871783_68871957_68885791_68885890_68932677_68932841_68933141
transcript_23475.known	chr12	+	7490	11	FSM	ENSG00000135679.27	ENST00000258149.11	7490	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	2.85657137141714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGAGGAGTGGTACT	-19	True	NA	NA	False	AATGAA	-19	NA	68808176	68845544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_23477.known	chr12	+	1583	10	FSM	ENSG00000135679.27	ENST00000311420.13	1583	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	7.82367410768175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATATATTTCTAACTAT	77	False	NA	NA	False	NA	NA	NA	68808272	68839867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_2348.known	chr1	-	880	8	FSM	ENSG00000004455.17	ENST00000467905.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	535.117991947685	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGAAGGGTGGTCAGGG	-1	True	NA	NA	False	NA	NA	NA	33036886	33010754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33012073_33012123_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_23480.known	chr12	+	649	2	FSM	ENSG00000135679.27	ENST00000544125.1	649	2	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATTATTTGATCTTAAA	1686	False	NA	27	True	AATAAA	-23	NA	68843065	68844190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_68843265_68843740
transcript_23482.known	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	418.910778090037	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	14	False	NA	34	True	AATAAA	-14	NA	69239615	69269939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_23488.known	chr12	+	1915	10	FSM	ENSG00000111605.18	ENST00000456847.7	1915	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	362.923350068153	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	-2	True	NA	34	True	AATAAA	-14	NA	69239599	69269939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257783_69258685_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_23493.known	chr12	+	6584	10	FSM	ENSG00000111605.18	ENST00000435070.7	6584	10	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_5	85.6527586346663	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTCTTTTTT	-5	True	NA	13	True	AATAAA	-18	NA	69239568	69274358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_23498.known	chr12	+	234	4	FSM	ENSG00000111605.18	ENST00000551516.1	234	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	544.092108215348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTTTGCTTCTTGTG	7	False	NA	-87	True	AAAACA	-29	NA	69239641	69269573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69239707_69251128_69251142_69262468_69262563_69269511
transcript_23501.nic	chr12	+	1518	8	NIC	ENSG00000127337.7	novel	1468	7	NA	NA	-1	-74	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	144.347652900763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCCTCCTGATGTGTT	9	True	NA	15	True	AATAAA	-19	NA	69359741	69390796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_69360024_69362787_69362908_69364176_69364300_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
transcript_23504.known	chr12	+	1468	7	FSM	ENSG00000127337.7	ENST00000247843.7	1468	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	22.5345413877353	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATTGTGACATCACATC	10	True	NA	89	True	AATACA	-16	NA	69359742	69390870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69360024_69362787_69362908_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
transcript_23506.known	chr12	+	1100	5	FSM	ENSG00000127337.7	ENST00000548020.5	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	132.944302247219	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATAAAGTATTACTTGT	-23	True	NA	NA	False	NA	NA	NA	69359709	69390631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69360024_69362787_69362908_69370705_69370799_69370887_69370976_69390146
transcript_23507.known	chr12	+	6768	9	FSM	ENSG00000166225.9	ENST00000549921.6	6768	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_8	38.5899922259645	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTGTATTTATATTT	-18	True	NA	20	True	AATAAA	-38	NA	69470387	69579793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69470531_69530864_69530961_69532013_69532057_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
transcript_23518.known	chr12	+	1916	16	FSM	ENSG00000166226.13	ENST00000299300.11	1916	16	0	0	0	0	multi-exon	TRUE	canonical	3	1949	junction_8	202.870796321205	4977	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCTTATGTCTTATA	7	True	NA	29	True	AATAAA	-15	NA	69585458	69601570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
transcript_2354.known	chr1	-	3597	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	257.267046730306	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	2	True	NA	-10	True	ATTAAA	-16	NA	33036883	33007985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_2355.known	chr1	-	886	7	FSM	ENSG00000004455.17	ENST00000550338.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	542.344498963118	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGACTTGGTTATGTTT	29	False	NA	NA	False	NA	NA	NA	33036902	33013206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33031543_33031662_33036735
transcript_23550.nic	chr12	+	1978	16	ISM	ENSG00000166268.11	ENST00000552032.7	3590	25	71785	374	-29563	0	3prime_fragment	FALSE	canonical	0	0	junction_3	2.95446930748805	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGATGTTTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	69897011	69958723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_69897247_69903643_69903845_69909968_69910078_69910820_69910931_69926570_69926735_69927684_69927749_69932512_69932599_69936112_69936188_69936282_69936336_69936452_69936633_69952112_69952176_69952798_69952887_69955362_69955438_69957821_69957943_69958248_69958324_69958444
transcript_23558.known	chr12	+	9333	11	FSM	ENSG00000127328.22	ENST00000247833.12	9333	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	8.82949602185765	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTATCTACATCCT	-20	True	NA	NA	False	AATAAA	-19	NA	69738859	69823199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_23561.known	chr12	+	1755	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	37.0798271334551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	-18	True	NA	2	True	AATAAA	-15	NA	69738861	69815723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
transcript_23565.known	chr12	+	1613	9	FSM	ENSG00000127328.22	ENST00000417413.7	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	41.9774865255175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	-18	True	NA	2	True	AATAAA	-15	NA	69738861	69815723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69812777_69812878_69812963_69813034_69815363
transcript_23566.known	chr12	+	2674	9	FSM	ENSG00000127328.22	ENST00000553099.5	2674	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.2897216438267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGATACTGTACGGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	69778966	69817117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69779097_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_23567.known	chr12	+	2840	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	38.4283017449379	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGATAAATAAAAAGT	NA	False	NA	NA	False	AAAAAG	-15	NA	69778949	69817181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_23572.nic	chr12	+	1029	4	ISM	ENSG00000127328.22	ENST00000378815.10	2386	6	-27	11631	-25	0	5prime_fragment	FALSE	canonical	3	113	junction_3	4.92160768674447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTATCAGATTATTTAAA	45	False	NA	NA	False	AATAAA	-17	NA	69738834	69785016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719
transcript_23574.nic	chr12	-	795	3	FSM	ENSG00000257815.8	ENST00000686072.1	834	3	19	20	0	0	multi-exon	FALSE	canonical	3	8	junction_2	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-23	True	NA	-15	True	AATAAA	-14	NA	70243379	70242305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_70242894_70243065_70243205_70243311
transcript_23575.known	chr12	-	452	2	FSM	ENSG00000257815.8	ENST00000553135.2	683	2	28	203	2	0	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-2	True	NA	NA	False	ATTAAA	-20	NA	70243358	70242488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_70242894_70243311
transcript_23576.known	chr12	-	883	2	FSM	ENSG00000257815.8	ENST00000549651.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-4	True	NA	-15	True	AATAAA	-14	NA	70243360	70242305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_70242894_70243065
transcript_23579.known	chr12	+	3031	17	FSM	ENSG00000111596.14	ENST00000550641.6	3031	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	175.224487711478	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	-7	True	NA	11	True	AATAAA	-19	NA	70243432	70354993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_70243481_70278131_70278275_70285399_70285587_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_2358.known	chr1	-	936	6	FSM	ENSG00000004455.17	ENST00000548033.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	474.205862469034	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTCAGAACCCCATGG	91	False	NA	NA	False	TTTAAA	-24	NA	33036840	33010477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_23592.known	chr12	+	2844	16	FSM	ENSG00000111596.14	ENST00000229195.8	2844	16	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	66.9621451933022	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	-7	True	NA	11	True	AATAAA	-19	NA	70243432	70354993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_23603.nic	chr12	+	1767	13	NIC	ENSG00000111596.14	novel	2844	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	49	junction_4	144.971740541236	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTT	17	True	NA	NA	False	NA	NA	NA	70243028	70353923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_23609.known	chr12	+	4717	3	FSM	ENSG00000135643.5	ENST00000258111.5	4717	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	18.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTGTGTGGCATT	-2	True	NA	15	True	AATAAA	-15	NA	70366289	70434292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_70367071_70400208_70400337_70430484
transcript_2361.known	chr1	-	5970	6	FSM	ENSG00000004455.17	ENST00000672715.1	5970	6	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_3	50.3801548231047	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	2	True	NA	-10	True	ATTAAA	-16	NA	33036883	33007985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_23612.nnic	chr12	-	914	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-317	-62814	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.5566238822398	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118564	71110215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71110671_71115849_71115959_71118069_71118187_71118331
transcript_23614.nnic	chr12	-	2278	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-213	-63921	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_3	11.0855260988773	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCAGTCTTAAGTATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	71118460	71111322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71113246_71115849_71115959_71118069_71118187_71118331
transcript_23615.known	chr12	-	565	3	FSM	ENSG00000258053.1	ENST00000549357.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTGTCTGGGCGACT	NA	False	NA	-3	True	AATAAA	-20	NA	71118247	71047401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_71047680_71115849_71115959_71118069
transcript_23617.nnic	chr12	-	857	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-332	-62814	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118579	71110215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71110454_71115849_71115959_71118069
transcript_23618.nnic	chr12	-	1074	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-332	-62814	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	12.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118579	71110215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_71110671_71115849_71115959_71118069
transcript_23621.nic	chr12	+	1562	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_6	46.8887572404682	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	6	True	NA	NA	False	AATAAA	-19	NA	71686092	71704056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
transcript_23624.known	chr12	+	5662	6	FSM	ENSG00000139291.14	ENST00000266673.10	5662	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.1785508899857	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCTACCTGAATTTCT	-5	True	NA	NA	False	AATACA	-14	NA	71686081	71705047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831
transcript_23625.known	chr12	+	4432	3	FSM	ENSG00000173451.7	ENST00000308086.3	4432	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCATGCCTGTTATT	0	True	NA	8	True	ATTAAA	-19	NA	71664300	71680644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71664581_71674202_71674399_71676688
transcript_23628.known	chr12	+	672	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATGTTTCTGTTTTT	101	False	NA	NA	False	ATTAAA	-21	NA	71664480	71665440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71664581_71664868
transcript_2363.known	chr1	-	5059	5	FSM	ENSG00000004455.17	ENST00000354858.11	5059	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	504.604981644058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGTGAGCTATTGT	NA	False	NA	-17	True	AATAAA	-6	NA	33037004	33008891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_23631.known	chr12	+	2159	18	FSM	ENSG00000121749.16	ENST00000319106.12	2159	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.3380024895615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGAGACACTTTGTTGC	-8	True	NA	NA	False	NA	NA	NA	71839758	71923223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71839812_71861404_71861497_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_23634.known	chr12	+	3157	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	14.2553443925427	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	-8	True	NA	10	True	AATAAA	-13	NA	71839758	71924313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_2364.known	chr1	-	811	5	FSM	ENSG00000004455.17	ENST00000480134.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	521.980064274489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCGTGTGTGCTACT	8	True	NA	-23	True	ATTAAA	-20	NA	33036877	33013043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
transcript_23645.known	chr12	+	1995	16	FSM	ENSG00000121749.16	ENST00000462788.6	1995	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	32.7162888414251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTATTTTTGTAGTTAC	-8	True	NA	12	True	ATTAAA	-19	NA	71839758	71923362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_2365.known	chr1	-	920	5	FSM	ENSG00000004455.17	ENST00000487289.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	529.856289478572	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTAGTCCATACCTT	87	False	NA	NA	False	NA	NA	NA	33036844	33019682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33020162_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_23651.nic	chr12	+	1688	4	ISM	ENSG00000121749.16	ENST00000462788.6	1995	16	3	41430	-1	-2969	5prime_fragment	FALSE	canonical	3	96	junction_1	7.58653778449403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTTAAGGAGGCAT	-5	True	NA	NA	False	NA	NA	NA	71839761	71881932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468
transcript_23652.known	chr12	-	3088	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTAAGTGTGTGTCTG	2670	False	NA	NA	False	AATAAA	-3	NA	72272236	72259576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_72262111_72264481_72264622_72271822
transcript_23655.known	chr12	-	1209	2	FSM	ENSG00000180881.20	ENST00000548958.2	1209	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTTGGGTATTTCT	-7	True	NA	NA	False	ATTAAA	-20	NA	75390910	75359883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_75361020_75390837
transcript_23657.known	chr12	+	404	3	FSM	ENSG00000173401.10	ENST00000547144.1	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCCATATGTGTATC	-5	True	NA	NA	False	AATAAA	-22	NA	75366936	75370384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_75367014_75369959_75369987_75370084
transcript_23659.known	chr12	+	484	2	FSM	ENSG00000173401.10	ENST00000548623.1	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATATGTGTATCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	75366832	75370387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_75367014_75370084
transcript_23661.nnic	chr12	-	1495	11	NNC	ENSG00000111615.14	novel	10104	10	NA	NA	-37	780	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.2562128616416	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATGTGAATGAGGTTG	NA	False	NA	NA	False	AATAGA	-33	NA	75511673	75499028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_75499036_75499542_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_23662.known	chr12	-	10104	10	FSM	ENSG00000111615.14	ENST00000229214.9	10104	10	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	25.7629267565183	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTCTTCCACTTTGT	8	True	NA	NA	False	AATAAA	-14	NA	75511609	75490862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_23673.known	chr12	-	5913	2	FSM	ENSG00000139289.14	ENST00000619060.1	5913	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGACCTTTTGAAGGC	782	False	NA	-15	True	AATAAA	-22	NA	76031776	76025446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76030093_76030509
transcript_2368.known	chr1	-	2840	8	FSM	ENSG00000004455.17	ENST00000672308.1	2840	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	558.728001438837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAGGGACTCTTTTAA	-1	True	NA	-75	True	NA	NA	NA	33036863	33010118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_33010834_33011447_33011711_33012073_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_23680.known	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	416.527848875545	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	952	False	NA	51	True	NA	NA	NA	76084666	76047154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23683.nic	chr12	-	1677	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	-12	168	combination_of_known_junctions	FALSE	canonical	3	453	junction_1	494.397393017219	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAAAATCTTAAGTGA	871	False	NA	NA	False	AAAAAG	-1	NA	76084747	76047426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23695.nic	chr12	-	1543	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	453	junction_1	494.397393017219	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTCTTACAAGATAA	836	False	NA	-18	True	AATAAA	-15	NA	76084782	76047595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23699.known	chr12	-	13159	15	FSM	ENSG00000187109.15	ENST00000618691.5	13159	15	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_9	291.856487307844	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTACATGTCTTTAA	-5	True	NA	NA	False	ATTAAA	-19	NA	76084685	76036584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_2371.known	chr1	+	2048	11	FSM	ENSG00000142920.17	ENST00000373443.7	2048	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.13209195267316	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	10	True	NA	11	True	AATAAA	-26	NA	33081166	33120529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_33081295_33081390_33081509_33082177_33082355_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_2373.nic	chr1	+	1989	3	ISM	ENSG00000121903.15	ENST00000361328.7	4316	8	18935	853	18920	-853	3prime_fragment	FALSE	canonical	3	5	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTAAGTGTAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	33491579	33495654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_33491703_33493186_33493616_33494217
transcript_23735.known	chr12	-	1686	14	FSM	ENSG00000187109.15	ENST00000535020.6	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	605.462168818022	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCGTGCTTTTTATA	-1	True	NA	NA	False	AAAACA	-13	NA	76084612	76048994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76049526_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23737.known	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	629.88045603026	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	889	False	NA	3	True	NA	NA	NA	76084729	76047631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
transcript_2374.known	chr1	+	2136	7	FSM	ENSG00000142698.15	ENST00000373374.7	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	4.74926894959167	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	NA	False	NA	8	True	GATAAA	-19	NA	34166882	34219131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_34167172_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_23753.known	chr12	-	1838	13	FSM	ENSG00000187109.15	ENST00000549596.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_7	312.071840019783	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTTGAATATCAAG	-5	True	NA	NA	False	ATTAAA	-24	NA	76084685	76049145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_23755.known	chr12	-	1597	12	FSM	ENSG00000187109.15	ENST00000544816.5	1597	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	679.248843749871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTGGCAAGAC	887	False	NA	NA	False	NA	NA	NA	76084731	76047966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76084566
transcript_2376.known	chr1	-	897	2	FSM	ENSG00000163866.9	ENST00000423898.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGGGATACCTGCA	7912	False	NA	-77	True	NA	NA	NA	34859717	34855348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34855983_34859454
transcript_23764.known	chr12	-	1339	12	FSM	ENSG00000187109.15	ENST00000548044.5	1339	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	676.517663302541	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATAAATTGCAAAAC	952	False	NA	-32	True	AAAACA	-44	NA	76084666	76049588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76084566
transcript_2377.known	chr1	-	918	2	FSM	ENSG00000163866.9	ENST00000456842.1	918	2	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTCACTTTGGGGCA	7	True	NA	NA	False	NA	NA	NA	34859755	34855168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34855983_34859651
transcript_23779.known	chr12	-	1074	10	FSM	ENSG00000187109.15	ENST00000551992.5	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_9	698.696104836416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAATGTCACTTTGAA	1524	False	NA	-30	True	AATAGA	-45	NA	76084094	76053328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76083832
transcript_2378.known	chr1	-	5694	2	FSM	ENSG00000163866.9	ENST00000521580.3	5694	2	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTTAATCAGATCCT	13	True	NA	-2	True	ATTAAA	-15	NA	34859749	34850361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34855983_34859676
transcript_23782.known	chr12	-	3568	2	FSM	ENSG00000179941.9	ENST00000650064.2	3568	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTCATTTTTTTT	10	True	NA	-1	True	AATGAA	-17	NA	76348415	76344473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76347788_76348161
transcript_23785.known	chr12	+	4732	17	FSM	ENSG00000186908.15	ENST00000426126.7	4732	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	11.8578823994843	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCTTATGATTTCAC	0	True	NA	29	True	AATAAA	-14	NA	76764114	76853696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_76764330_76797433_76797538_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76842982_76845708_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
transcript_23795.known	chr12	-	754	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	676.224400624526	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCCCTGTACTTGGATA	-7	True	NA	NA	False	ACTAAA	-35	NA	76879023	76858841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
transcript_23796.known	chr12	-	908	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	1701	junction_5	64.7907400791193	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTCTTTTAATTA	-3	True	NA	-19	True	AATAAA	-19	NA	76879019	76858708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_23797.known	chr12	+	4705	11	FSM	ENSG00000067715.14	ENST00000261205.9	4705	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	7.07106781186548	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	-24	True	NA	9	True	AATAAA	-21	NA	78864773	79452008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_2380.known	chr1	+	1355	2	FSM	ENSG00000189280.3	ENST00000338513.1	1355	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTGCCCTCTGGTTGT	-18	True	NA	8	True	AATAAA	-20	NA	34755046	34758512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_34755196_34757306
transcript_23800.known	chr12	+	2718	10	FSM	ENSG00000067715.14	ENST00000552744.5	2718	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31.6290224592603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAACAACAATTAGCCAT	-3	True	NA	NA	False	AAGAAA	-13	NA	79045630	79450294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_79045827_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_23806.nic	chr12	+	1070	6	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	677	158209	-104	-4054	internal_fragment	FALSE	canonical	3	93	junction_4	7.62627038597505	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGAAACTGGGAAA	0	True	NA	29	True	AAAAAG	-12	NA	78864669	79292070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007
transcript_23809.nic	chr12	+	1048	4	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	677	232368	-104	394	internal_fragment	FALSE	canonical	3	95	junction_2	7.58653778449403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCAGCTTGTATTTAAT	0	True	NA	NA	False	CATAAA	-29	NA	78864669	79217911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502
transcript_2381.known	chr1	+	1444	2	FSM	ENSG00000189433.7	ENST00000339480.3	1444	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGACCAGGTGGGGA	-1	True	NA	NA	False	AATAAA	-17	NA	34759739	34762327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_34759789_34760932
transcript_23818.known	chr12	+	567	3	FSM	ENSG00000257474.5	ENST00000552167.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	5290	False	NA	41	True	AATAGA	-34	NA	79545529	79550535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_79545559_79546065_79546177_79550108
transcript_2382.known	chr1	+	1621	2	FSM	ENSG00000187513.9	ENST00000342280.5	1621	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGTGTATTGATGCTA	0	True	NA	17	True	AATAAA	-17	NA	34792998	34795747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_34793069_34794196
transcript_23821.known	chr12	-	5620	25	FSM	ENSG00000058272.19	ENST00000450142.7	5620	25	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_13	73.8498852778767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAACTAGTTTTTTTA	-6	True	NA	-4	True	CATAAA	-18	NA	79935097	79773567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23823.known	chr12	-	2925	24	FSM	ENSG00000058272.19	ENST00000550107.5	2925	24	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_12	72.7797256714332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAGCAAGT	14	True	NA	NA	False	NA	NA	NA	79934931	79775928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23827.nic	chr12	-	2838	18	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	230	21276	-100	1235	internal_fragment	FALSE	canonical	3	252	junction_6	81.7003555493231	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAAGAAGATCTACA	224	False	NA	NA	False	GATAAA	-38	NA	79935230	79795681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23831.nic	chr12	-	2747	17	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	230	22389	-100	122	internal_fragment	FALSE	canonical	3	252	junction_5	84.1705857173395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATGAAAGAGGTAAGAA	224	False	NA	NA	False	NA	NA	NA	79935230	79796794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23834.nic	chr12	-	2517	16	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	230	22863	-100	0	internal_fragment	FALSE	canonical	3	252	junction_4	85.6503486404009	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	224	False	NA	NA	False	GATAAA	-8	NA	79935230	79797268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23837.nic	chr12	-	2456	16	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	230	22924	-100	0	internal_fragment	FALSE	canonical	3	252	junction_4	85.6503486404009	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAACAAGAAAATGAAGA	224	False	NA	NA	False	AAAACA	-28	NA	79935230	79797329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23839.nic	chr12	-	2349	15	ISM	ENSG00000058272.19	ENST00000550107.5	2925	24	-299	21340	-100	0	5prime_fragment	FALSE	canonical	3	214	junction_3	85.5894328781782	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	224	False	NA	NA	False	GATAAA	-8	NA	79935230	79797268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_2384.known	chr1	-	5122	16	FSM	ENSG00000163867.17	ENST00000357182.9	5122	16	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_15	15.0607658061158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTTCATATAATTTT	-5	True	NA	-4	True	AATAAA	-22	NA	35031945	34986164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34988936_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35030546_35030714_35031814
transcript_23841.nic	chr12	-	2288	15	ISM	ENSG00000058272.19	ENST00000550107.5	2925	24	-299	21401	-100	0	5prime_fragment	FALSE	canonical	3	214	junction_3	85.5894328781782	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAACAAGAAAATGAAGA	224	False	NA	NA	False	AAAACA	-28	NA	79935230	79797329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23843.nic	chr12	-	1835	11	ISM	ENSG00000058272.19	ENST00000547330.5	2275	15	-100	11263	-100	-1681	5prime_fragment	FALSE	canonical	3	374	junction_4	53.4865403629736	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAAAACAGGTGAGT	224	False	NA	NA	False	NA	NA	NA	79935230	79808496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23844.nic	chr12	-	3067	5	ISM	ENSG00000058272.19	ENST00000550510.5	631	6	-515	5232	-100	1784	5prime_fragment	FALSE	canonical	3	475	junction_1	46.0889086440545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCGAAACAATTGT	224	False	NA	NA	False	NA	NA	NA	79935230	79826343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_23847.known	chr12	+	3234	3	FSM	ENSG00000257557.2	ENST00000552885.2	3234	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCATGTTTTCTTTCTT	NA	False	NA	NA	False	GATAAA	-25	NA	79934900	79942712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_79935659_79938727_79938853_79940361
transcript_23850.known	chr12	+	1329	3	FSM	ENSG00000111046.4	ENST00000228641.4	1329	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGGTCCTAATTTGA	0	True	NA	NA	False	ATTAAA	-19	NA	80707633	80709474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_80708239_80708523_80708615_80708841
transcript_23852.known	chr12	-	989	7	FSM	ENSG00000111052.8	ENST00000261203.7	989	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_4	47.016545551067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAACACCTTCTTTCTCTG	498	False	NA	-5	True	TATAAA	-17	NA	80937780	80797574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
transcript_23853.known	chr12	-	6121	6	FSM	ENSG00000111052.8	ENST00000552864.6	6121	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	12.3385574521497	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTATTGTTTTCATT	2	True	NA	0	True	AGTAAA	-17	NA	80937934	80792519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848250_80848323_80889250_80889370_80937640
transcript_23862.nic	chr12	-	660	5	ISM	ENSG00000111052.8	ENST00000261203.7	989	7	73	48040	-3	-51	5prime_fragment	FALSE	canonical	3	10	junction_2	54.2695817194126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTTTCTAAGCATTGAT	-4	True	NA	-5	True	AATAAA	-19	NA	80937707	80845614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
transcript_23863.nic	chr12	-	680	4	ISM	ENSG00000111052.8	ENST00000549417.5	905	5	-49	3875	27	0	5prime_fragment	FALSE	canonical	3	117	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTCTCATTTCATT	-10	True	NA	2	True	ATTAAA	-22	NA	80937753	80845563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_80845940_80848250_80848323_80889250_80889370_80937640
transcript_23866.known	chr12	+	8391	16	FSM	ENSG00000111058.8	ENST00000548058.6	8391	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	10.0044434572288	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTATTTATTTATTGAT	-5	True	NA	NA	False	AATAAA	-21	NA	81078078	81261210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
transcript_23874.known	chr12	-	1585	4	FSM	ENSG00000133773.12	ENST00000256151.8	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	36.1509182302316	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTCTGAAATTGCATTA	10	True	NA	NA	False	AATAAA	-21	NA	82358387	82352302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358222
transcript_23875.known	chr12	-	984	4	FSM	ENSG00000133773.12	ENST00000548126.1	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	103.345160613462	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAATCAGAGCTATCA	7	True	NA	NA	False	AATAAA	-11	NA	82358786	82352846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358678
transcript_23879.nic	chr12	-	514	3	ISM	ENSG00000133773.12	ENST00000256151.8	1585	4	-9	2262	0	-1718	5prime_fragment	FALSE	canonical	3	367	junction_2	10.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACATCAAATCAAAAAG	1	True	NA	NA	False	AATAAA	-3	NA	82358396	82354564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_82354595_82356959_82357270_82358222
transcript_23881.known	chr12	-	600	2	FSM	ENSG00000133773.12	ENST00000552606.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAGTCACGGTTTAAT	-12	True	NA	74	True	NA	NA	NA	82358409	82356856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82357270_82358222
transcript_23883.known	chr12	-	553	2	FSM	ENSG00000133773.12	ENST00000547758.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATTAGGGAAACATTT	NA	False	NA	87	True	NA	NA	NA	82358805	82356843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_82357270_82358678
transcript_23885.known	chr12	+	2064	12	FSM	ENSG00000127720.8	ENST00000248306.8	2064	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.28260092478945	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGACCTACATTCCTGA	2	True	NA	85	True	AATAAA	-28	NA	82358528	82479239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_23890.nnic	chr12	+	1859	10	NIC	ENSG00000127720.8	novel	2064	12	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	13.9584922600129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTATAATCCATTTTT	NA	False	NA	12	True	AATAAA	-17	NA	82358492	82479166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82476643_82476719_82477280_82477353_82478931
transcript_23894.known	chr12	+	743	4	FSM	ENSG00000127720.8	ENST00000548200.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGCAAAAGAAAG	13	True	NA	NA	False	NA	NA	NA	82358539	82398980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794
transcript_23896.known	chr12	-	4799	12	FSM	ENSG00000072041.18	ENST00000266682.10	4799	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	62.8820225527979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGCTGTTTTGATATA	-2	True	NA	-1	True	AATAAA	-19	NA	84912799	84859490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84862007_84863438_84863602_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_23897.known	chr12	-	4312	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	17.8518206354422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTTTTCGATTTT	9903	False	NA	0	True	AATAAA	-22	NA	84912876	84880844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_23901.known	chr12	-	1831	2	FSM	ENSG00000072041.18	ENST00000681628.1	1831	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTAATCTACAAACCCT	-10	True	NA	-44	True	NA	NA	NA	84912839	84890794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84892309_84912522
transcript_23902.known	chr12	-	3307	2	FSM	ENSG00000072041.18	ENST00000680067.1	3307	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACCAAGGAATATCATAC	-16	True	NA	NA	False	AATATA	-9	NA	84912763	84908937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_84912004_84912522
transcript_23904.known	chr12	+	4464	17	FSM	ENSG00000133640.20	ENST00000525971.6	4464	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.36746844825605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTATTTTCATTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	85036313	85124858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_85036408_85038152_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246_85047471_85052176_85052252_85055546_85057185_85065261_85065415_85066747_85066899_85072906_85073099_85098354_85098549_85098866_85098995_85104003_85104078_85106521_85106616_85121696_85121877_85124069
transcript_23906.known	chr12	+	1890	6	FSM	ENSG00000133640.20	ENST00000529408.1	1890	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	2.56124969497314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAACACATTAAATT	-18	True	NA	NA	False	AAAAAG	-14	NA	85036339	85048587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_85036408_85038149_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246
transcript_23908.known	chr12	+	1332	4	FSM	ENSG00000180318.4	ENST00000316824.4	1332	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGTTATAGATTGAT	1	True	NA	NA	False	AATAAA	-14	NA	85280219	85301784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_85280488_85283571_85283877_85286852_85286982_85301154
transcript_23910.known	chr12	+	1239	4	FSM	ENSG00000133636.11	ENST00000256010.7	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_3	24.9131825880731	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTCTACAGATTTA	0	True	NA	22	True	AATAAA	-24	NA	85874294	85882992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_85874477_85876639_85876702_85878344_85878570_85882222
transcript_23912.nic	chr12	-	2745	24	ISM	ENSG00000198707.17	ENST00000674971.1	7761	53	5	58043	5	4155	5prime_fragment	FALSE	canonical	3	18	junction_14	6.53823999487812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAGAAAACTTGA	-12	True	NA	NA	False	AATAAA	-2	NA	88142094	88107058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_88107099_88109065_88109182_88111201_88111352_88111693_88111859_88114419_88114563_88115097_88115183_88117032_88117146_88118482_88118571_88118642_88118744_88120113_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_23915.nic	chr12	-	1350	13	ISM	ENSG00000198707.17	ENST00000676418.1	1934	17	5	6824	5	5411	5prime_fragment	FALSE	canonical	3	18	junction_3	8.03983139679489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGGAAAAGAATACTTG	-12	True	NA	NA	False	AATATA	-6	NA	88142094	88125306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_23917.known	chr12	+	2829	7	FSM	ENSG00000133641.18	ENST00000356891.4	2829	7	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	44.7415417208164	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTCTGAATTTTTTG	-1	True	NA	16	True	AATAAA	-18	NA	88035535	88050160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_23921.known	chr12	-	1169	7	FSM	ENSG00000198707.17	ENST00000676331.1	1169	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	7.18795288428261	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGATAATTAGTATTCT	-17	False	NA	NA	False	NA	NA	NA	88142099	88130717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_23922.known	chr12	+	2740	6	FSM	ENSG00000133641.18	ENST00000550333.5	2740	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	87.3040663428686	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGTCTGAATTTTT	-4	True	NA	14	True	AATAAA	-16	NA	88035504	88050158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_23925.known	chr12	-	1458	6	FSM	ENSG00000198707.17	ENST00000552770.3	1458	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.23832034148352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTAACTGTCCTGT	-17	False	NA	NA	False	AGTAAA	-21	NA	88142099	88135852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_23927.known	chr12	+	1578	5	FSM	ENSG00000133641.18	ENST00000552121.5	1578	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	111.730423341183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTTCAGAAGCAGCAA	-1	True	NA	NA	False	AGTAAA	-35	NA	88035535	88049225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88046806_88046977_88048233
transcript_23929.known	chr12	-	1934	17	FSM	ENSG00000198707.17	ENST00000676418.1	1934	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.7722102796655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACTCAGTTATTCTAAA	-17	False	NA	NA	False	AAAAAG	-15	NA	88142099	88118482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_88118571_88118642_88118744_88120117_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_23930.known	chr12	+	7192	14	FSM	ENSG00000139324.12	ENST00000266712.11	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	13.1360653552634	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTGCCCTTTCTTA	0	True	NA	8	True	AATAAA	-19	NA	88142306	88199887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_88142488_88148287_88148505_88153290_88153510_88154287_88154388_88160113_88160230_88160678_88160852_88166329_88166583_88172596_88172746_88174606_88174728_88176207_88176320_88188842_88188947_88190452_88190623_88192603_88192831_88194837
transcript_23934.known	chr12	-	3627	3	FSM	ENSG00000139318.8	ENST00000279488.8	3627	3	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_2	32.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGAACGTACTTATAT	-4	True	NA	NA	False	AATAAA	-23	NA	89352501	89347234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89349562_89350587_89351026_89351639
transcript_23937.known	chr12	-	1959	2	FSM	ENSG00000139318.8	ENST00000308385.6	1959	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAATAAAAA	-2	True	NA	-48	True	NA	NA	NA	89352405	89348368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89349562_89351639
transcript_23938.known	chr12	+	1495	1	FSM	ENSG00000271327.1	ENST00000605595.1	1495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTTTCCAAGTGATG	NA	False	NA	NA	False	AATAAA	-19	NA	89367806	89369301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_89367800_89369300
transcript_23939.known	chr12	-	1392	12	FSM	ENSG00000139323.14	ENST00000547496.5	1392	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	42.7537635480277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAATTCATTTTCAT	30	True	NA	NA	False	NA	NA	NA	89526000	89421153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89460015_89460039_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_23940.known	chr12	-	3024	12	FSM	ENSG00000139323.14	ENST00000313546.8	3024	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	24.2302999984839	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-17	True	NA	NA	False	AATAAA	-25	NA	89526047	89419717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_23941.nnic	chr12	-	2704	11	NIC	ENSG00000139323.14	novel	1392	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	50.5039602407574	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-26	True	NA	NA	False	AATAAA	-25	NA	89526056	89419717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89421258_89425160_89425380_89459637_89459719_89460015_89460039_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89525119_89525205_89525880
transcript_23943.nic	chr12	-	2861	11	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	22.155134844997	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-26	True	NA	NA	False	AATAAA	-25	NA	89526056	89419717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_23944.nic	chr12	-	2952	11	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	32.8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-26	True	NA	NA	False	AATAAA	-25	NA	89526056	89419717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89421258_89425160_89425380_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_23947.nic	chr12	-	2780	10	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	32.6488991741521	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-26	True	NA	NA	False	AATAAA	-25	NA	89526056	89419717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89421258_89425160_89425380_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_23953.known	chr12	-	7062	21	FSM	ENSG00000070961.16	ENST00000428670.8	7062	21	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_20	44.9506395950047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGGA	5	True	NA	-9	True	AATAAA	-24	NA	89708838	89588048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_89591296_89599116_89599300_89601325_89601434_89603042_89603255_89603711_89603926_89604154_89604347_89609936_89610044_89610420_89610509_89611192_89611373_89616801_89617040_89619998_89620241_89621548_89621792_89624182_89624398_89626453_89626616_89627677_89627717_89630504_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
transcript_23957.nic	chr12	-	1273	6	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	-53	11307	combination_of_known_junctions	FALSE	canonical	3	195	junction_2	16.7020956768904	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAGTAAGAATA	-12	True	NA	NA	False	AAGAAA	-15	NA	89709353	89630515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
transcript_2396.known	chr1	-	2702	4	FSM	ENSG00000163867.17	ENST00000317538.9	2702	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	24.3903441732356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGTTTACCATTGAATA	35	False	NA	-1	True	ATTAAA	-25	NA	35031905	35017243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35019603_35020382_35020468_35030546_35030714_35031814
transcript_23960.nic	chr12	+	347	2	FSM	ENSG00000245904.5	ENST00000685108.1	470	2	71	52	-3	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	-29	True	NA	7	True	AATAAA	-30	NA	92146153	92146918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_92146244_92146661
transcript_23961.nic	chr12	+	399	2	FSM	ENSG00000245904.5	ENST00000685108.1	470	2	71	0	-3	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTTAAAAACCAGTGTA	-29	True	NA	59	True	NA	NA	NA	92146153	92146970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_92146244_92146661
transcript_23962.known	chr12	-	4629	2	FSM	ENSG00000133639.6	ENST00000256015.5	4629	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGACTGTTATTTATGA	0	True	NA	NA	False	AATAAA	-15	NA	92145846	92140277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_92144448_92145387
transcript_23963.known	chr12	+	10626	2	FSM	ENSG00000205056.9	ENST00000504409.3	10626	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAATTTGGGCTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	92466450	92492091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_92467003_92482017
transcript_23966.nnic	chr12	+	435	3	NNC	ENSG00000257345.2	novel	898	4	NA	NA	2497	-213	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	283.5	111	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTTCTTCTATGCATG	NA	False	NA	16	True	AATAAA	-16	NA	93005911	93019607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_93006014_93006093_93006230_93019410
transcript_23969.known	chr12	-	4877	4	FSM	ENSG00000177889.10	ENST00000318066.7	4877	4	0	0	0	0	multi-exon	FALSE	canonical	3	2535	junction_2	114.690888914508	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTAATATATTGTTTGTT	-16	True	NA	NA	False	AATAAA	-23	NA	93441947	93405683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_93410080_93410733_93410875_93411052_93411300_93441854
transcript_2397.known	chr1	-	922	3	FSM	ENSG00000243749.1	ENST00000373337.3	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	5.5	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTCTCTTTTGCCTC	NA	False	NA	-9	True	TATAAA	-12	NA	34985353	34981534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_34982120_34983766_34983948_34985197
transcript_23971.known	chr12	-	676	4	FSM	ENSG00000177889.10	ENST00000549490.1	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1289.38081608534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAGTATAAAGCACTGT	33	True	NA	NA	False	TTTAAA	-43	NA	93441898	93409762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_93410080_93410733_93410875_93411125_93411300_93441854
transcript_23973.known	chr12	-	607	3	FSM	ENSG00000177889.10	ENST00000552442.1	607	3	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	1344.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCCTCCCTGCTTTTA	-4	True	NA	81	True	TTTAAA	-5	NA	93441935	93409800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_93410080_93411052_93411300_93441854
transcript_23976.known	chr12	+	1419	5	FSM	ENSG00000173598.14	ENST00000547014.5	1419	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1132.65219727858	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTAGCATGCTCAGT	-12	True	NA	NA	False	AGTAAA	-30	NA	93378577	93400138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_23980.known	chr12	+	725	7	FSM	ENSG00000198015.14	ENST00000551396.5	725	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1075.99179055109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAGAGAAACCTATTT	24	False	NA	26	True	TATAAA	-22	NA	93467539	93501385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93467555_93469188_93469356_93470485_93470506_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_23987.known	chr12	+	1983	6	FSM	ENSG00000198015.14	ENST00000393128.8	1983	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	962.912581701994	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGCTTTGTCGATGG	1	True	NA	22	True	ATTAAA	-37	NA	93467516	93502652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93467555_93469191_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501184
transcript_23994.known	chr12	+	15560	6	FSM	ENSG00000198015.14	ENST00000552217.6	15560	6	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	698.96740982681	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGTTCCTGGTGGTC	-2	True	NA	NA	False	AATAAA	-18	NA	93467513	93516214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93467555_93469188_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_24.known	ERCC-00067	+	628	1	FSM	ERCC-00067A	DQ883653	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00067_+_0_600
transcript_2400.known	chr1	+	3055	11	FSM	ENSG00000197056.11	ENST00000488455.5	3055	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	50.1163645928154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAGAAAAATTCAG	-8	True	NA	NA	False	TTTAAA	-20	NA	35079385	35114636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111775_35111913_35112086_35112131_35112976
transcript_24001.known	chr12	+	999	2	FSM	ENSG00000198015.14	ENST00000552938.1	999	2	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGATTGAACTTGATA	NA	False	NA	-9	True	ATTAAA	-6	NA	93500746	93502621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93501029_93501904
transcript_24003.known	chr12	-	1134	5	FSM	ENSG00000246985.8	ENST00000662875.1	1134	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	6.01560470775798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGGGCTTCCAATT	3077	False	NA	NA	False	AAAACA	-45	NA	93570854	93542819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93570817
transcript_24004.known	chr12	-	2097	5	FSM	ENSG00000246985.8	ENST00000500986.6	2097	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	7.39509972887452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGTAAATAAATGTGGCAA	-14	True	NA	NA	False	NA	NA	NA	93571768	93542021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93571566
transcript_24007.nic	chr12	-	1567	4	NIC	ENSG00000246985.8	novel	2097	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	5.73488351136175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCGTAGGTATCTGTGT	2156	False	NA	-8	True	AATAAA	-25	NA	93571775	93542462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_93543306_93545070_93545359_93566743_93566971_93571566
transcript_24008.known	chr12	+	2072	3	FSM	ENSG00000120833.14	ENST00000549206.5	2072	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	96	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	10	False	NA	-15	True	NA	NA	NA	93570398	93576174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93570666_93572684_93573037_93574721
transcript_24009.known	chr12	+	2391	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	68	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	328	False	NA	17	True	AATAAA	-20	NA	93571360	93576206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93571915_93572684_93573037_93574721
transcript_24011.known	chr12	+	1189	3	FSM	ENSG00000169372.13	ENST00000332896.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGTTGGGTTTTTTT	4	True	NA	37	True	AATAAA	-41	NA	93677374	93850756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93677473_93678768_93679073_93849969
transcript_24013.known	chr12	+	839	3	FSM	ENSG00000169372.13	ENST00000552983.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTATTCTTTTTTG	4	True	NA	NA	False	AATAAA	-24	NA	93677374	93738636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_93677473_93678768_93679073_93738199
transcript_24016.nic	chr12	-	2901	17	NIC	ENSG00000173588.16	novel	3130	16	NA	NA	1	56	intron_retention	FALSE	canonical	0	0	junction_4	32.1504641296203	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTCCTGCGAGGAAT	-12	True	NA	-6	True	AATAAA	-15	NA	94459987	94306392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_94306626_94308782_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_24018.known	chr12	-	3130	16	FSM	ENSG00000173588.16	ENST00000339839.9	3130	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.2432662424232	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGTTTAATTTTACAT	5	True	NA	0	True	ATTAAA	-20	NA	94459946	94308279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_24023.nic	chr12	-	1915	11	ISM	ENSG00000173588.16	ENST00000339839.9	3130	16	-41	27345	1	-3939	5prime_fragment	FALSE	canonical	3	67	junction_10	13.7218803376214	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGGAAAAAAATGAAAA	-12	True	NA	1	True	NA	NA	NA	94459987	94335624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_24032.nic	chr12	-	1057	5	ISM	ENSG00000173588.16	ENST00000339839.9	3130	16	-41	92594	1	30	5prime_fragment	FALSE	canonical	3	67	junction_4	13.2382022948737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAATAAAATATGAATC	-12	True	NA	4	True	NA	NA	NA	94459987	94400873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_24033.known	chr12	-	698	5	FSM	ENSG00000184752.14	ENST00000684171.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1829.19333313896	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCGTGCCTTTTTGCCC	-23	True	NA	NA	False	ATTAAA	-20	NA	95003713	94971327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94974170_94974286_94994169_94994258_95002738_95002822_95003594
transcript_24034.known	chr12	-	546	5	FSM	ENSG00000184752.14	ENST00000551991.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1788.21111729013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	82	False	NA	NA	False	ATTAAA	-15	NA	95003608	94971332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94994169_94994258_94996903_94996977_95002738_95002822_95003594
transcript_24038.known	chr12	-	562	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	288.905982400273	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-7	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
transcript_24039.known	chr12	-	276	3	FSM	ENSG00000184752.14	ENST00000547157.1	276	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	1831.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-10	True	NA	NA	False	ATTAAA	-16	NA	95003700	94971331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971486_95002805_95002822_95003594
transcript_24040.known	chr12	-	487	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1819.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGTCTTTCGTGCCT	-23	True	NA	NA	False	ATTAAA	-12	NA	95003713	94971335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_95002738_95002822_95003594
transcript_24041.known	chr12	-	708	5	FSM	ENSG00000184752.14	ENST00000684558.1	708	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1844.82145138764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-7	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_94971621_94991826_94991973_94994169_94994258_95002738_95002822_95003594
transcript_24042.nic	chr12	-	2382	14	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	39.6341255148318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-9	True	NA	-3	True	AATAAA	-20	NA	95073621	95021892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95022404_95025149_95025256_95028386_95028510_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24043.known	chr12	-	4058	14	FSM	ENSG00000120798.17	ENST00000333003.10	4058	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	20.9914042706637	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTATCCTTCGTT	-6	True	NA	NA	False	AATATA	-20	NA	95073618	95020228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24044.nnic	chr12	-	2385	14	NNC	ENSG00000120798.17	novel	4058	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	41.6720075472463	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-9	True	NA	-3	True	AATAAA	-20	NA	95073621	95021892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049079_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24048.nic	chr12	-	2828	13	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	111	junction_3	18.0915879777192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-9	True	NA	-3	True	AATAAA	-20	NA	95073621	95021892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24054.nnic	chr12	-	2259	13	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.3538556489106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-9	True	NA	-3	True	AATAAA	-20	NA	95073621	95021892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95022404_95025149_95025256_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24059.nnic	chr12	-	2688	12	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	17	junction_3	41.6704901826954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-9	True	NA	-3	True	AATAAA	-20	NA	95073621	95021892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95022404_95025149_95025256_95028386_95028525_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24060.known	chr12	-	1822	12	FSM	ENSG00000120798.17	ENST00000393101.7	1822	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	45.6816146535493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	32	False	NA	-11	True	AATAAA	-26	NA	95073580	95030408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95030630_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24061.known	chr12	-	2014	12	FSM	ENSG00000120798.17	ENST00000330677.7	2014	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	45.1572093216466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTATTCTGCTTCAG	-5	True	NA	-20	True	AATAAA	-17	NA	95073537	95030417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95030874_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24069.nic	chr12	-	3013	10	NIC	ENSG00000120798.17	novel	1822	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	132	junction_2	13.144026479689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-9	True	NA	-11	True	AATAAA	-26	NA	95073621	95030408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24071.known	chr12	-	2499	11	FSM	ENSG00000120798.17	ENST00000552861.5	2499	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.4854617385459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-37	True	NA	-3	True	AATAAA	-20	NA	95073569	95021892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95022404_95025149_95025256_95028386_95028510_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_24072.known	chr12	-	9291	21	FSM	ENSG00000180263.14	ENST00000343958.9	9291	21	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_20	16.0227182462902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTGTGATTTTTT	-44	True	NA	NA	False	AATAAA	-15	NA	95217467	95076748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
transcript_24073.known	chr12	-	2232	20	FSM	ENSG00000180263.14	ENST00000451107.3	2232	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_19	23.0039139148464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAAATTGTTTTGTTA	53	True	NA	-54	True	TATAAA	-39	NA	95217482	95081397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95217224
transcript_24077.known	chr12	+	2712	13	FSM	ENSG00000028203.19	ENST00000552660.5	2712	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	107.065400573668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTTGGAAATTCTT	-1	True	NA	12	True	AATAAA	-26	NA	95217811	95300921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_24078.known	chr12	+	3002	13	FSM	ENSG00000028203.19	ENST00000547997.5	3002	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	105.613551319053	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	-3	True	NA	15	True	AATAAA	-18	NA	95217760	95301172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_2408.known	chr1	+	4161	10	FSM	ENSG00000197056.11	ENST00000359858.9	4161	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	27.8744982792693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATCTTTCCTAATC	-9	True	NA	16	True	ATTAAA	-21	NA	35079384	35115859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_24081.nic	chr12	+	2967	13	NIC	ENSG00000028203.19	novel	3942	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	118.481450728233	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	-3	True	NA	15	True	AATAAA	-18	NA	95218254	95301172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_95218346_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_24083.known	chr12	+	2629	12	FSM	ENSG00000028203.19	ENST00000549192.5	2629	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	108.58686586331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	11	True	NA	NA	False	AAAAAG	-12	NA	95217823	95296956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050
transcript_24085.known	chr12	+	2362	12	FSM	ENSG00000028203.19	ENST00000551994.5	2362	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	114.028269657097	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	5	True	NA	NA	False	AATAAA	-3	NA	95217817	95300654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95257153_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_24086.known	chr12	+	4510	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.4814252111302	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	-6	True	NA	11	True	AATAAA	-23	NA	95217806	95302799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_24091.nic	chr12	+	2856	11	NIC	ENSG00000028203.19	novel	2362	12	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	115.627159439294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	10	False	NA	15	True	AATAAA	-18	NA	95217755	95301172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_95217887_95251939_95252072_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_24094.nic	chr12	+	2680	10	NIC	ENSG00000028203.19	novel	2362	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	123.530473073561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	10	False	NA	15	True	AATAAA	-18	NA	95217755	95301172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_95217887_95251939_95252072_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_2410.nnic	chr1	+	1918	10	NNC	ENSG00000197056.11	novel	4161	10	NA	NA	-34	400	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	40.4474968323134	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGGAGAAGAAACATT	NA	False	NA	NA	False	AATAAA	-37	NA	35079347	35113615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111807_35111913_35112086_35112131_35112976
transcript_24104.known	chr12	+	1874	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	186.511152481561	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTCAGATCTGAGAG	2	True	NA	23	True	AATAAA	-1	NA	95474161	95514326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_24105.known	chr12	+	1862	11	FSM	ENSG00000111142.14	ENST00000546753.5	1862	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	251.722088820191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCCATTTTCTAAA	NA	False	NA	-4	True	NA	NA	NA	95474080	95514299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485947_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_24108.known	chr12	+	1836	10	FSM	ENSG00000111142.14	ENST00000261220.13	1836	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	307.926799061477	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	-10	True	NA	39	True	AATAAA	-17	NA	95474149	95514342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95474331_95476073_95476179_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_24114.nic	chr12	+	490	3	ISM	ENSG00000111142.14	ENST00000546753.5	1862	11	-86	31039	-86	-234	5prime_fragment	FALSE	canonical	3	634	junction_1	54.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAGAGGAC	NA	False	NA	31	True	AAGAAA	-3	NA	95473994	95483260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_95474331_95476070_95476179_95483214
transcript_24125.known	chr12	-	3161	6	FSM	ENSG00000136014.12	ENST00000393091.6	3161	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	303.738440109249	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAAATTATAGGGC	-3	True	NA	74	True	AATAGA	-7	NA	95548844	95517275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
transcript_24126.known	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	233.198284727826	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	6	True	NA	-8	True	ATTAAA	-21	NA	95551476	95516559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
transcript_24146.nic	chr12	-	2362	2	ISM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	15610	0	1594	5prime_fragment	FALSE	canonical	3	475	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACCCAAAGAAAGAAAGAAA	6	True	NA	NA	False	NA	NA	NA	95551476	95532169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_95534327_95551271
transcript_24150.nic	chr12	-	828	2	ISM	ENSG00000136014.12	ENST00000258499.8	4008	6	9	17135	9	69	5prime_fragment	FALSE	canonical	3	475	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTAAAGAAAAGACGG	-15	True	NA	NA	False	AGTAAA	-3	NA	95551467	95533694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_95534327_95551271
transcript_24158.known	chr12	+	1389	4	FSM	ENSG00000139343.11	ENST00000266735.10	452	4	-24	-913	-24	602	multi-exon	FALSE	canonical	3	5385	junction_3	228.461521194854	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTCTTACTGCTTTT	NA	False	NA	NA	False	AATACA	-19	NA	95858927	95867053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_95859077_95861167_95861294_95865323_95865389_95866004
transcript_2416.known	chr1	+	3980	9	FSM	ENSG00000197056.11	ENST00000373329.5	3980	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	37.3210312692455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTTTTGATCTTTCC	-3	True	NA	11	True	ATTAAA	-16	NA	35079390	35115854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_24165.known	chr12	-	2140	19	FSM	ENSG00000111144.10	ENST00000228740.7	2140	19	0	0	0	0	multi-exon	TRUE	canonical	3	982	junction_3	162.198095618359	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTTTCTCTCAGTAT	0	True	NA	-1	True	ATTAAA	-20	NA	96035587	96000752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_24178.nic	chr12	-	2032	18	NIC	ENSG00000111144.10	novel	2140	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	395	junction_2	253.827053346133	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGCATATTCTTTGTAA	12	False	NA	-9	True	AATAAA	-20	NA	96035639	96000829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_24181.nic	chr12	-	1955	18	NIC	ENSG00000111144.10	novel	1908	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	395	junction_2	253.827053346133	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTTTTAGTTTTG	12	False	NA	34	True	TATAAA	-18	NA	96035639	96000906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_24192.known	chr12	+	724	2	FSM	ENSG00000188596.11	ENST00000554621.1	724	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTGTGGTAGGCACAC	-25	True	NA	NA	False	NA	NA	NA	96489570	96501201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96489927_96500833
transcript_24194.nic	chr12	+	3258	16	NIC	ENSG00000139350.12	novel	4015	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	49.7388736860371	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAACAAACCTTTAGC	-24	True	NA	NA	False	ATTAAA	-10	NA	96907222	96953221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_96907301_96907603_96907625_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_24195.known	chr12	+	4015	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	39.1360021804306	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	10	True	NA	6	True	ATTAAA	-18	NA	96907256	96953780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_24200.known	chr12	+	3366	15	FSM	ENSG00000139350.12	ENST00000429527.6	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	50.1101338074853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTGGTTTATAGCAT	-23	True	NA	15	True	AATAAA	-20	NA	96907223	96953351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96907301_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_24205.known	chr12	+	2490	14	FSM	ENSG00000139350.12	ENST00000411739.6	2490	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	48.8094956325644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAATTTTAAAATGGCA	-9	True	NA	NA	False	TTTAAA	-31	NA	96907237	96952475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_96907301_96907603_96907857_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_24226.known	chr12	+	1587	10	FSM	ENSG00000255794.10	ENST00000662502.1	1587	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.99228022593531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTTATCTTTTGT	483	False	NA	1	True	AATAAA	-3	NA	97465720	97565023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97465728_97492460_97492607_97493180_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796_97561048_97564737
transcript_24231.known	chr12	+	2632	9	FSM	ENSG00000255794.10	ENST00000660138.1	2632	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.75925291729789	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	33	False	NA	13	True	AATAAA	-15	NA	97465169	97565035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_24233.known	chr12	+	1736	9	FSM	ENSG00000255794.10	ENST00000663509.1	1736	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.76912961663017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGCAGAAAATGAGAAAGTA	0	True	NA	NA	False	AAGAAA	-16	NA	97465206	97560964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796
transcript_24236.known	chr12	+	1125	8	FSM	ENSG00000255794.10	ENST00000548886.2	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	7.28431359084683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCTCGTGCTGTGAAT	483	False	NA	NA	False	AAGAAA	-33	NA	97465720	97560981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97465728_97492460_97492607_97493180_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796
transcript_2424.nic	chr1	+	692	5	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	-37	11461	-34	6804	5prime_fragment	FALSE	canonical	3	52	junction_1	39.0576496988746	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCATTTGTTACCATA	NA	False	NA	NA	False	AAGAAA	-4	NA	35079347	35104398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_24241.known	chr12	+	687	1	FSM	ENSG00000255794.10	ENST00000547946.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	453	False	NA	13	True	AATAAA	-15	NA	97564348	97565035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_97564300_97565000
transcript_24242.known	chr12	-	3311	1	FSM	ENSG00000227825.4	ENST00000554295.1	3311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATAGTGTTACACTGT	47	False	NA	NA	False	AATAAA	-33	NA	98457145	98453834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98453800_98457100
transcript_24244.known	chr12	+	1285	8	FSM	ENSG00000075415.15	ENST00000549338.5	1285	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1025.33958535995	3565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTGTTGAAATAAAC	8	False	NA	-16	True	NA	NA	NA	98593695	98601674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_98593745_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_24245.known	chr12	+	1417	8	FSM	ENSG00000075415.15	ENST00000551123.5	1417	8	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	1413.79124112062	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGACTTATTTT	8	False	NA	17	True	AATAAA	-15	NA	98593695	98601707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_98593741_98593978_98594136_98595432_98595662_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_24246.known	chr12	-	1645	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	34.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	NA	False	NA	-14	True	AATAAA	-45	NA	98645113	98613404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98614341_98634295_98634414_98644522
transcript_24248.known	chr12	-	2902	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAACTTTGTTGTTTTA	-23	True	NA	NA	False	AATAAA	-17	NA	98644788	98624248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98626767_98634295_98634414_98644522
transcript_24253.known	chr12	-	1368	2	FSM	ENSG00000166130.15	ENST00000393042.3	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	72	False	NA	-14	True	AATAAA	-45	NA	98644954	98613404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_98614341_98644522
transcript_24255.known	chr12	-	5198	21	FSM	ENSG00000111647.13	ENST00000279907.12	5198	21	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	16.9147864308125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACCCTACTGAACTTA	-15	True	NA	-32	True	AATAAA	-26	NA	100142874	100037071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100037756_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_24259.known	chr12	-	2023	13	FSM	ENSG00000111647.13	ENST00000356828.7	2023	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.9915451167084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTTTATTCTA	12	True	NA	NA	False	AATAAA	-21	NA	100142847	100069907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100070170_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_24263.known	chr12	+	1737	11	FSM	ENSG00000075089.10	ENST00000188312.7	1737	11	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	20.9609160105182	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	-3	True	NA	10	True	AATAAA	-17	NA	100200814	100224424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_24264.known	chr12	+	1659	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	94.5541643715389	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	12	True	NA	7	True	AATAAA	-14	NA	100200829	100224421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_24267.known	chr12	+	1747	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	99.2613217723802	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	-1	True	NA	9	True	AATAAA	-16	NA	100200816	100224423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_24269.known	chr12	+	1877	11	FSM	ENSG00000075089.10	ENST00000546902.5	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	98.9725214390338	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	-2	True	NA	10	True	AATAAA	-17	NA	100200815	100224424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_24276.known	chr12	-	3324	10	FSM	ENSG00000166153.17	ENST00000550587.6	3324	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	10.785220797662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCAGTTTTATCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	100267079	100240061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100241846_100242485_100242570_100248899_100248979_100252175_100252302_100252393_100252537_100253488_100253716_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_24282.known	chr12	-	1155	5	FSM	ENSG00000166153.17	ENST00000416321.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.4731800328267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGCAAGCCAAATC	NA	False	NA	NA	False	AATAAA	-28	NA	100267079	100252262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_24284.known	chr12	-	1033	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	3.74165738677394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTGGAAATCAGAGTG	20	False	NA	-14	True	AATAAA	-22	NA	100267055	100255872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
transcript_24287.known	chr12	+	3948	19	FSM	ENSG00000136021.19	ENST00000635101.1	3948	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	45.4395881675825	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGTTGTATCTTCTG	9	True	NA	18	True	AATAAA	-18	NA	100267245	100340139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317680_100317693_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_24291.known	chr12	+	2328	17	FSM	ENSG00000136021.19	ENST00000549687.5	2328	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	14.4231530446709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACAAAAATTAGCAAA	-5	True	NA	NA	False	NA	NA	NA	100267139	100337404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386
transcript_243.known	chr1	-	1832	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_9	13.7822573362984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	6	True	NA	-16	True	TATAAA	-16	NA	1116089	1081822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_24301.nnic	chr12	+	1265	10	NIC	ENSG00000139354.11	novel	5736	10	NA	NA	-32	-1061	combination_of_known_splicesites	TRUE	canonical	1	2	junction_1	13.2646378497097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGAAAAACAGGGACGT	-33	True	NA	NA	False	NA	NA	NA	100573650	100623829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_100573786_100592373_100592450_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_24302.known	chr12	+	5736	10	FSM	ENSG00000139354.11	ENST00000547754.6	5736	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	13.4421485642992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCAGTTTGCTTT	0	True	NA	12	True	ATTAAA	-16	NA	100573683	100628288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100573786_100591735_100591857_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_24303.known	chr12	+	2218	9	FSM	ENSG00000139354.11	ENST00000266754.9	2218	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.2225241501304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATACTCATTATAAAAA	-1	True	NA	NA	False	AAGAAA	-13	NA	100573682	100624890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_100573786_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_24307.known	chr12	+	1585	8	FSM	ENSG00000120800.5	ENST00000551825.1	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	15.5655296821443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGAGGGTGAGGCAG	13	True	NA	NA	False	AATACA	-27	NA	101280127	101291427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732
transcript_24309.known	chr12	+	9031	62	FSM	ENSG00000120800.5	ENST00000261637.5	9031	62	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_22	28.7595000253693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTCTTCACTGTTTAA	-10	True	NA	13	True	AATAAA	-18	NA	101280104	101386618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732_101290889_101291741_101291889_101291969_101292105_101293167_101293246_101295479_101295659_101299681_101299838_101299972_101300062_101302447_101302554_101305914_101306066_101306698_101306762_101308184_101308344_101309762_101309840_101311718_101311799_101312035_101312277_101317477_101317664_101319544_101319636_101320851_101320938_101321503_101321630_101327080_101327248_101329240_101329450_101333300_101333445_101334424_101334505_101338050_101338278_101338812_101338958_101340522_101340611_101342445_101342590_101342786_101342838_101342940_101343094_101344594_101344751_101345553_101345695_101346450_101346589_101352054_101352195_101353046_101353130_101354831_101355119_101356553_101356694_101356925_101357083_101361961_101362061_101363575_101363744_101365458_101365626_101366557_101366700_101367859_101367977_101369720_101369892_101370431_101370564_101371057_101371169_101372883_101372964_101373400_101373471_101373584_101373768_101374807_101374940_101375623_101375757_101379370_101379559_101381139_101381212_101383040_101383314_101383542_101383670_101385582_101385729_101385967
transcript_24311.known	chr12	-	3197	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	212.245706670359	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTCCTTTCTGATC	-9	True	NA	-1	True	AATAAA	-42	NA	101407772	101393115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_24321.known	chr12	-	1231	5	FSM	ENSG00000120805.14	ENST00000539055.5	1231	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.47306871581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCTGCTAGCTTGTAA	17	True	NA	NA	False	NA	NA	NA	101407746	101394917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101407641
transcript_24326.known	chr12	-	470	3	FSM	ENSG00000120805.14	ENST00000551688.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGTTGGAGGGATAA	14	True	NA	NA	False	AGTAAA	-13	NA	101407749	101395487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_101395671_101396398_101396578_101407641
transcript_24328.known	chr12	+	1572	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_8	24.6373699895098	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	-26	True	NA	16	True	AATAAA	-22	NA	101697639	101729074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
transcript_24330.known	chr12	-	945	8	FSM	ENSG00000120860.11	ENST00000544341.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	73.2507574663072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	8	True	NA	-2	True	AATAAA	-18	NA	102062073	102012941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102013193_102017719_102017806_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_24331.known	chr12	-	921	8	FSM	ENSG00000120860.11	ENST00000535501.5	921	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	70.1444573573649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGTCTTGTTGCTAAA	-28	True	NA	-4	True	AATAAA	-16	NA	102062034	102012943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102050188_102050292_102061247_102061347_102061911
transcript_24333.known	chr12	-	865	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	49.5333781964803	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	2	True	NA	-2	True	AATAAA	-18	NA	102062079	102012941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_24334.known	chr12	-	569	6	FSM	ENSG00000120860.11	ENST00000541569.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	9.2520268049763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAATAAAAATATTTCA	28	True	NA	NA	False	AATATA	-33	NA	102061978	102025920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102026039_102039867_102039979_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_24335.known	chr12	-	883	8	FSM	ENSG00000120860.11	ENST00000540536.5	883	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.4782866851606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTCTTGTTGCTAAAA	6	True	NA	-3	True	AATAAA	-17	NA	102062000	102012942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102013193_102019276_102019372_102025973_102026039_102039867_102039979_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_24338.known	chr12	-	2362	10	FSM	ENSG00000075188.9	ENST00000552283.6	2362	10	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_6	44.4149902400607	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTATGTGTCTGTCACG	-17	True	NA	NA	False	AATAAA	-15	NA	102120114	102073102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
transcript_2434.known	chr1	-	1431	3	FSM	ENSG00000116560.11	ENST00000466213.5	1431	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	5296	False	NA	-16	True	AATAAA	-17	NA	35179246	35176379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35176472_35177318_35177400_35177988
transcript_24340.known	chr12	-	1203	9	FSM	ENSG00000075188.9	ENST00000251074.5	1203	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_6	45.3038353784754	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTTTCTACTCT	1670	False	NA	-16	True	AATAAA	-15	NA	102118583	102074196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362
transcript_24342.known	chr12	+	1916	11	FSM	ENSG00000185480.12	ENST00000392911.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	130.413227856686	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTTTAAAAATACTAGT	-3	True	NA	NA	False	NA	NA	NA	102120246	102196429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_102120287_102123885_102124042_102148234_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
transcript_24345.nic	chr12	+	2952	10	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	140	junction_9	116.557515077268	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	NA	False	NA	8	True	AATAAA	-19	NA	102120166	102197516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
transcript_2435.known	chr1	-	2835	3	FSM	ENSG00000116560.11	ENST00000468598.5	2835	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	126.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	8702	False	NA	-14	True	AATAAA	-19	NA	35180645	35176377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35176475_35177318_35177400_35177988
transcript_24351.nnic	chr12	+	2834	9	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-16	0	intron_retention	FALSE	canonical	2	3	junction_7	151.887910973849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	NA	False	NA	12	True	AATAAA	-23	NA	102120166	102197520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102195311_102195448_102195950
transcript_24352.nic	chr12	+	2729	9	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	74	junction_6	142.881014746537	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	NA	False	NA	12	True	AATAAA	-23	NA	102120166	102197520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195311_102195448_102195950
transcript_24356.nic	chr12	+	2589	8	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	74	junction_6	143.252453054468	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	NA	False	NA	8	True	AATAAA	-19	NA	102120166	102197516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195950
transcript_24358.nic	chr12	+	2514	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	70	junction_6	134.67790794666	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	NA	False	NA	12	True	AATAAA	-23	NA	102120166	102197520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102195950
transcript_2436.known	chr1	-	464	6	FSM	ENSG00000116560.11	ENST00000460428.5	464	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	868.822559559776	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	5102	False	NA	-14	True	AATAAA	-19	NA	35188042	35176377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972
transcript_24360.nic	chr12	+	2355	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	51	junction_2	168.337623707701	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	NA	False	NA	8	True	AATAAA	-19	NA	102120166	102197516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_102120287_102123885_102124042_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195950
transcript_24366.known	chr12	+	835	5	FSM	ENSG00000185480.12	ENST00000392909.7	835	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	231.158495409535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAGAACATTGAAGAAG	8	True	NA	NA	False	NA	NA	NA	102120203	102151823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_102120287_102123885_102124042_102148229_102148464_102150263_102150372_102151569
transcript_2437.known	chr1	-	3740	10	FSM	ENSG00000116560.11	ENST00000357214.6	3740	10	0	0	0	0	multi-exon	FALSE	canonical	3	1764	junction_8	159.424040506311	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGTCAGTTAA	-1	True	NA	-7	True	CATAAA	-14	NA	35193145	35182935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_24371.nic	chr12	+	1889	4	ISM	ENSG00000185480.12	ENST00000541394.5	2452	12	-18	43719	-16	936	5prime_fragment	FALSE	canonical	3	25	junction_3	209.415588934752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGAGGAGTTAAACA	NA	False	NA	NA	False	AGTAAA	-18	NA	102120166	102152948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_102120287_102123885_102124042_102148229_102148464_102151569
transcript_24374.known	chr12	+	976	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_2	44.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTTGTCTACGTTA	-5	True	NA	NA	False	ATTAAA	-20	NA	102120244	102149007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_102120287_102123885_102124042_102148229
transcript_24380.known	chr12	-	3759	13	FSM	ENSG00000171759.10	ENST00000553106.6	3759	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	2.77888866675551	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTTGACTTTATTTTC	-10	True	NA	NA	False	AATAAA	-21	NA	102917244	102836888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_102839219_102840399_102840516_102843645_102843780_102844335_102844432_102846894_102846952_102851686_102851757_102852814_102852951_102855135_102855333_102866595_102866664_102877461_102877551_102894734_102894919_102912790_102912899_102917070
transcript_24383.known	chr12	-	738	3	FSM	ENSG00000257681.1	ENST00000550029.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTACCGATGTCTGCCC	6150	False	NA	-6	True	AATAAA	-31	NA	103768858	103763311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103763819_103766734_103766914_103768806
transcript_24384.known	chr12	+	2816	19	FSM	ENSG00000166598.16	ENST00000680370.1	2816	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1830.62059908048	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	13	True	NA	9	True	AATAAA	-11	NA	103930409	103947922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103931710_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24394.known	chr12	+	2775	18	FSM	ENSG00000166598.16	ENST00000679538.1	2775	18	0	0	0	0	multi-exon	FALSE	canonical	1	166	junction_2	1412.57065965286	5633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	14	True	NA	9	True	AATAAA	-11	NA	103930410	103947922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932278_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24396.known	chr12	+	3184	18	FSM	ENSG00000166598.16	ENST00000680391.1	3184	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	1444.72008759063	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTGACTCAGGCTTA	813	False	NA	102	True	NA	NA	NA	103930350	103948015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943574_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_2440.known	chr1	-	4777	21	FSM	ENSG00000142687.18	ENST00000325722.8	4777	21	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_20	25.4261676231397	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTGCTGGGTGTG	-9	True	NA	-7	True	ATTAAA	-18	NA	35557403	35433491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
transcript_24403.known	chr12	+	2646	18	FSM	ENSG00000166598.16	ENST00000680316.1	2646	18	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	1425.28877423679	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	116	False	NA	9	True	AATAAA	-11	NA	103930599	103947922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930623_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24409.known	chr12	+	2831	17	FSM	ENSG00000166598.16	ENST00000681861.1	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	593.595502925814	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGTGAAATTTACAT	794	False	NA	NA	False	AAAAAG	-45	NA	103930331	103947695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310
transcript_24410.known	chr12	+	3248	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	654.688749998807	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	820	False	NA	9	True	AATAAA	-11	NA	103930357	103947922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24412.known	chr12	+	2713	17	FSM	ENSG00000166598.16	ENST00000680663.1	2713	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	1491.34146696649	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	825	False	NA	9	True	AATAAA	-11	NA	103930362	103947922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_24437.known	chr12	+	1204	7	FSM	ENSG00000166598.16	ENST00000640977.2	1204	7	0	0	0	0	multi-exon	FALSE	canonical	3	4584	junction_3	392.088708783555	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGATTTGAAGTCAGCT	825	False	NA	NA	False	NA	NA	NA	103930362	103938535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339
transcript_24442.known	chr12	-	620	5	FSM	ENSG00000204954.10	ENST00000549960.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	27.5079533953364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATGTTTAGCCGA	37	True	NA	54	True	NA	NA	NA	103957134	103951409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103953413_103953535_103954874_103954969_103956630_103956749_103957068
transcript_24448.known	chr12	-	1243	4	FSM	ENSG00000204954.10	ENST00000547975.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	21.483844059096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTTTATTTCATTAA	-10	True	NA	-3	True	ATTAAA	-25	NA	103957181	103950739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103953413_103953535_103956630_103956749_103957068
transcript_24453.known	chr12	-	685	3	FSM	ENSG00000204954.10	ENST00000552940.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGGACTGAAAGAAAGAA	24	True	NA	-120	True	NA	NA	NA	103957147	103951583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103953413_103953535_103956630
transcript_24456.known	chr12	-	1702	3	FSM	ENSG00000204954.10	ENST00000378090.9	1702	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-44	True	NA	NA	False	ATTAAA	-31	NA	103957215	103950193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630_103956749_103957068
transcript_24458.known	chr12	-	463	3	FSM	ENSG00000204954.10	ENST00000547945.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGTGCTCAGTGGAT	8443	False	NA	44	True	NA	NA	NA	103957273	103951419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630_103956749_103957139
transcript_24459.known	chr12	-	660	3	FSM	ENSG00000204954.10	ENST00000553183.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACGCGAAATAGAATATTT	8	True	NA	-33	True	NA	NA	NA	103965708	103951281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630_103956749_103965515
transcript_24469.known	chr12	-	1446	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCATCTTTATTTC	-19	True	NA	-8	True	ATTAAA	-20	NA	103957190	103950744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103951631_103956630
transcript_24479.known	chr12	+	3183	10	FSM	ENSG00000139372.15	ENST00000392872.8	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_6	65.4309550330974	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	-16	True	NA	17	True	AATAAA	-26	NA	103965871	103988874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_24485.known	chr12	+	1387	9	FSM	ENSG00000139372.15	ENST00000544861.5	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	155.69682077679	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGTAATTGTAATGTA	1	True	NA	NA	False	NA	NA	NA	103965844	103987194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_24494.known	chr12	+	1139	3	FSM	ENSG00000139372.15	ENST00000544060.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	6.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATAACAGCAAA	15	True	NA	NA	False	CATAAA	-14	NA	103965902	103980668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103976917_103977061_103979830
transcript_24495.known	chr12	+	862	2	FSM	ENSG00000139372.15	ENST00000545698.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAACTGTAAGAAACAT	-2	True	NA	NA	False	NA	NA	NA	103965841	103980473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_103966061_103979830
transcript_24497.known	chr12	-	1927	11	FSM	ENSG00000120820.13	ENST00000360814.9	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	14.8848916690717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-35	True	NA	-8	True	AATAAA	-17	NA	104050187	103988986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_245.known	chr1	-	982	10	FSM	ENSG00000131591.18	ENST00000482816.5	982	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.5394030834453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGCCCGGTTAGGACC	5048	False	NA	NA	False	NA	NA	NA	1116243	1083925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_2450.known	chr1	+	3433	8	FSM	ENSG00000020129.16	ENST00000356090.8	3433	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	20.3499987464273	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	-23	True	NA	20	True	AATAAA	-20	NA	35557791	35566779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_24500.nic	chr12	-	1792	10	ISM	ENSG00000120820.13	ENST00000548660.5	1835	11	13996	-293	0	0	3prime_fragment	FALSE	canonical	3	39	junction_5	9.78661217060213	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-35	True	NA	-8	True	AATAAA	-17	NA	104050187	103988986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894
transcript_24501.known	chr12	-	1835	11	FSM	ENSG00000120820.13	ENST00000548660.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.1537874836079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAAATTATACCT	NA	False	NA	-2	True	TATAAA	-12	NA	104064183	103989279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894_104050289_104063948
transcript_24504.known	chr12	+	5660	15	FSM	ENSG00000111727.12	ENST00000229330.9	5660	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	2.93900580163443	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTGTTATTTATTTT	-12	True	NA	NA	False	AATAAA	-23	NA	104064530	104106524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104064724_104066166_104066316_104067946_104068108_104079444_104079654_104080745_104080831_104082499_104082607_104082712_104082902_104086846_104087015_104087985_104088039_104093385_104093564_104095359_104095564_104096359_104096434_104098342_104098481_104101967_104102154_104102958
transcript_24507.known	chr12	-	3508	9	FSM	ENSG00000120837.8	ENST00000551446.6	3508	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	265.099509618558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTAACCTATCATAAAAA	-1	True	NA	-38	True	NA	NA	NA	104138241	104117117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104131753_104131839_104135447_104135533_104138140
transcript_24513.known	chr12	-	3424	8	FSM	ENSG00000120837.8	ENST00000240055.8	3424	8	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_7	65.09083135535	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAACATTGCTTTCT	-18	True	NA	-6	True	CATAAA	-15	NA	104138210	104117085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104138140
transcript_24524.known	chr12	+	3930	15	FSM	ENSG00000198431.17	ENST00000503506.6	3930	15	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	90.0923562410331	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATATCCACGTGTGCCT	NA	False	NA	7	True	ATTAAA	-14	NA	104286681	104350277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104287110_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_24525.known	chr12	+	3974	15	FSM	ENSG00000198431.17	ENST00000526691.5	3974	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	139.318549243327	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	174	False	NA	13	True	ATTAAA	-20	NA	104286880	104350283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104287347_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_24526.nic	chr12	+	3536	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	132.224258129399	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	265	False	NA	13	True	ATTAAA	-20	NA	104286971	104350283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_24527.nic	chr12	+	3723	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	150.096812938976	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	-16	True	NA	13	True	ATTAAA	-20	NA	104287021	104350283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_2453.known	chr1	-	852	3	FSM	ENSG00000239636.2	ENST00000444348.2	902	3	42	8	42	-2	multi-exon	FALSE	canonical	2	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAATGGATGGTGTTA	32	False	NA	NA	False	ATTAAA	-17	NA	35577729	35569814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35569920_35574359_35574699_35577321
transcript_24530.known	chr12	+	400	5	FSM	ENSG00000198431.17	ENST00000526580.5	400	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	201.162092601961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGAATCACATTGGCT	19	True	NA	NA	False	NA	NA	NA	104287056	104318943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912
transcript_24531.known	chr12	+	4082	15	NNC	ENSG00000198431.17	novel	3974	15	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	197.789828673091	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	NA	False	NA	35	True	ATTAAA	-42	NA	104286681	104350305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352_104348413_104348415
transcript_24532.known	chr12	+	528	1	FSM	ENSG00000213442.5	ENST00000462885.1	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	878	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCAGGGCCCTCGTCC	3	True	NA	-49	True	NA	NA	NA	104265308	104265836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104265300_104265800
transcript_24533.known	chr12	+	1467	1	FSM	ENSG00000255150.2	ENST00000527879.2	1467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGATATTTGATAATT	-28	True	NA	11	True	AATAAA	-21	NA	104303738	104305205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104303700_104305200
transcript_24534.known	chr12	+	5696	3	FSM	ENSG00000171310.11	ENST00000549260.5	5696	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTGTGTATGGTT	-6	True	NA	8	True	ATTAAA	-16	NA	104456970	104762014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104457515_104601905_104601992_104756948
transcript_24535.known	chr12	+	5791	33	FSM	ENSG00000136051.15	ENST00000332180.10	5791	33	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_9	27.0439457180346	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCCTGGATGTTT	-16	True	NA	39	True	AATAAA	-15	NA	105107730	105169130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748_105162846_105164110_105164308_105164640_105164741_105166863
transcript_24543.known	chr12	+	23524	4	FSM	ENSG00000151131.11	ENST00000552951.7	23524	4	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_3	37.1423687391576	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTCCTTCTCTTTA	-4	True	NA	13	True	AATAAA	-16	NA	104986315	105017625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104986468_104988166_104988254_104991711_104991849_104994477
transcript_24544.known	chr12	+	459	3	FSM	ENSG00000151131.11	ENST00000280749.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	452.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGACATATGTCTGCAA	19	True	NA	5	True	AATAAA	-16	NA	104986338	104994720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_104986468_104988166_104988254_104994477
transcript_24545.known	chr12	-	3171	21	FSM	ENSG00000136044.12	ENST00000258530.8	3171	21	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	14.5186087487748	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	-42	True	NA	-7	True	AATAAA	-31	NA	105236174	105173299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_24547.known	chr12	+	2277	10	FSM	ENSG00000166046.11	ENST00000299045.8	2277	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	3.7548322774924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATTTGAAATGTACAAT	-20	True	NA	11	True	AATAAA	-20	NA	106302732	106347003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106335638_106335827_106336031_106336214_106340825_106340999_106346285
transcript_24548.known	chr12	+	1788	7	FSM	ENSG00000166046.11	ENST00000547153.5	1788	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4.87909372276815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCAGTAGAGAATTAC	50	False	NA	NA	False	AATAAA	-23	NA	106302802	106330171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106329329
transcript_24550.known	chr12	+	4183	28	FSM	ENSG00000013503.10	ENST00000228347.9	4183	28	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_11	9.50820885684023	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGCTGCTTTGTCAT	8	True	NA	8	True	NA	NA	NA	106357747	106510198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106357952_106363869_106363903_106366515_106366573_106366657_106366723_106369274_106369351_106369582_106369684_106376358_106376451_106378266_106378385_106380030_106380140_106393030_106393154_106405856_106405977_106410825_106410961_106427196_106427359_106430272_106430474_106432317_106432481_106433718_106433873_106437056_106437132_106437680_106437780_106444462_106444591_106454501_106454712_106457137_106457297_106459250_106459369_106463477_106463621_106496054_106496159_106496751_106496919_106501322_106501437_106504080_106504255_106509419
transcript_24557.known	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	58.1984684368503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	4	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
transcript_24558.known	chr12	+	2134	9	FSM	ENSG00000111785.21	ENST00000470628.2	2134	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	46.3301670081169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCCTTCCCCTCTTGCT	31	False	NA	NA	False	NA	NA	NA	106774745	106871505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822
transcript_24559.known	chr12	+	2440	9	FSM	ENSG00000111785.21	ENST00000392839.6	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	41.7041289922233	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAACACACACATCCTC	50	False	NA	NA	False	NA	NA	NA	106774639	106886786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106885903
transcript_24561.nic	chr12	+	1166	3	ISM	ENSG00000111785.21	ENST00000470628.2	2134	9	-169	55945	-44	594	5prime_fragment	FALSE	canonical	3	203	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTATTCTCTCTTTTTAA	-13	True	NA	20	True	AATATA	-13	NA	106774576	106815560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_106774830_106783996_106784045_106814695
transcript_24562.known	chr12	-	1469	1	FSM	ENSG00000260329.1	ENST00000570282.1	1469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTGAATCTGTTTCATA	2	True	NA	NA	False	ATTAAA	-18	NA	106955497	106954028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106954000_106955500
transcript_24565.known	chr12	+	833	3	FSM	ENSG00000151135.10	ENST00000547081.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	21.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGAAAGTATTGATGA	874	False	NA	NA	False	NA	NA	NA	106956784	106971502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_106957150_106967110_106967181_106971104
transcript_24567.known	chr12	-	1763	3	FSM	ENSG00000120832.10	ENST00000392830.6	1763	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	26	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAAGTGAATCACTT	1	True	NA	NA	False	ATTAAA	-18	NA	106987149	106977290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106978772_106985114_106985216_106986968
transcript_24568.known	chr12	-	418	3	FSM	ENSG00000120832.10	ENST00000550496.1	418	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATACAACTGATAAACAG	-23	True	NA	NA	False	AATACA	-22	NA	106987122	106978614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106978768_106985114_106985226_106986968
transcript_2457.known	chr1	-	4426	6	FSM	ENSG00000126067.12	ENST00000373237.4	4426	6	0	0	0	0	multi-exon	FALSE	canonical	3	2452	junction_4	52.7461846961465	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATGGCCTCGTCATTC	7	True	NA	-20	True	CATAAA	-19	NA	35641526	35599540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35603375_35605232_35605283_35609245_35609409_35631273_35631345_35636309_35636433_35641341
transcript_24571.known	chr12	-	3235	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTGCTTCTTTCTAG	24	False	106987150	1	True	ATTAAA	-22	NA	106987126	106977548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106978772_106985114
transcript_24572.known	chr12	-	2987	13	FSM	ENSG00000008405.12	ENST00000008527.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_12	18.6741056605724	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTACGTGTTTTTTT	-8	True	NA	-5	True	ATTAAA	-19	NA	107093549	106991363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_106992002_106992786_106992891_106992964_106993037_106997293_106997387_106997487_106997691_106997914_106998067_106999550_106999863_106999941_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
transcript_24577.known	chr12	+	2549	15	FSM	ENSG00000136045.12	ENST00000412830.8	2549	15	0	0	0	0	multi-exon	TRUE	canonical	3	687	junction_8	51.8379047353087	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTATTCTGTTTCTTTGTT	8	True	NA	12	True	ATTAAA	-15	NA	107685798	107713162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466_107697598_107699372_107699435_107702934_107703032_107703684_107703747_107704635_107704748_107708925_107709017_107709110_107709233_107710404_107710511_107712110
transcript_24587.nic	chr12	+	881	7	ISM	ENSG00000136045.12	ENST00000412830.8	2549	15	-55	15584	-55	0	5prime_fragment	FALSE	canonical	3	767	junction_2	36.1324723144647	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGGAAAGAAGG	NA	False	NA	NA	False	AGTAAA	-15	NA	107685743	107697578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466
transcript_24588.nnic	chr12	-	1952	2	Genic_Genomic	ENSG00000258072.1	novel	679	1	NA	NA	209	21495	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTCAGGGCTGAGAA	10	True	NA	NA	False	AATAAA	-15	NA	107903739	107881774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr12_-_107882994_107903006
transcript_24590.known	chr12	-	4154	19	FSM	ENSG00000075856.12	ENST00000546815.6	4154	19	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_10	43.389564655429	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTTCCAGCATTCCTC	-4	True	NA	-3	True	AATAAA	-18	NA	108561173	108522213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24593.known	chr12	-	3704	19	FSM	ENSG00000075856.12	ENST00000228284.8	3704	19	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_15	77.5018916535367	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGTTCTCTTCAAAAC	10	True	NA	-39	True	NA	NA	NA	108561159	108522703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24594.known	chr12	-	2834	18	FSM	ENSG00000075856.12	ENST00000431469.6	2834	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	89.5495069045677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGACCTCCCACCACCCAG	10	True	NA	NA	False	NA	NA	NA	108561159	108523411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24595.nic	chr12	-	3078	15	ISM	ENSG00000075856.12	ENST00000546815.6	4154	19	-1225	8009	-998	0	5prime_fragment	FALSE	canonical	3	284	junction_6	37.652004852169	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAAGATCAGA	3009	False	NA	NA	False	AAGAAA	-8	NA	108562398	108530222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24596.nic	chr12	-	2122	15	ISM	ENSG00000075856.12	ENST00000228284.8	3704	19	-229	7519	12	0	5prime_fragment	FALSE	canonical	3	58	junction_11	79.1958306468007	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAAGATCAGA	4019	False	NA	NA	False	AAGAAA	-8	NA	108561388	108530222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24597.nic	chr12	-	1806	15	ISM	ENSG00000075856.12	ENST00000546815.6	4154	19	-8	8064	-8	-55	5prime_fragment	FALSE	canonical	3	284	junction_6	37.652004852169	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAAGGCTGAACA	4226	False	NA	NA	False	NA	NA	NA	108561181	108530277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24609.known	chr12	-	544	4	FSM	ENSG00000075856.12	ENST00000552221.1	544	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	168.794418022503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTGGGATTGGTCAGAA	1	True	NA	NA	False	NA	NA	NA	108561168	108545288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108545324_108547886_108547992_108549136_108549215_108560842
transcript_24610.known	chr12	+	3255	3	FSM	ENSG00000198855.7	ENST00000552695.6	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGACTGTCTTATTT	-14	True	NA	NA	False	AATAAA	-19	NA	108515276	108521210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108515362_108516914_108517274_108518399
transcript_24613.known	chr12	-	3637	19	FSM	ENSG00000075856.12	ENST00000546728.5	3637	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	86.674234000112	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGACGTTCTCTTCA	8	True	NA	-43	True	NA	NA	NA	108561161	108522707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538944_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_24614.known	chr12	+	1069	6	FSM	ENSG00000136003.16	ENST00000392807.8	1069	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	591.362968066145	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	2	True	NA	11	True	AATAAA	-15	NA	108562605	108569368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_24616.known	chr12	+	983	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	86.2699252346958	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	-8	True	NA	11	True	AATAAA	-15	NA	108562595	108569368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_24620.known	chr12	-	3814	11	FSM	ENSG00000110880.11	ENST00000261401.8	3814	11	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	65.0073841959512	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTGTGTTTATTTCA	6	True	NA	NA	False	GATAAA	-18	NA	108731518	108645108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_24623.nic	chr12	-	1355	8	ISM	ENSG00000110880.11	ENST00000261401.8	3814	11	-32	6936	-24	0	5prime_fragment	FALSE	canonical	3	546	junction_1	45.9493954125134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCACTTTTTTTTTTTT	388	False	NA	NA	False	AAAAAG	-11	NA	108731550	108652044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_24627.known	chr12	-	1030	4	FSM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	35.4055865020699	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5	True	NA	-2	True	AATAAA	-17	NA	109093472	109088188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109088513_109090008_109090208_109092506_109092788_109093246
transcript_24628.nic	chr12	-	956	4	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	57.9214026840588	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5732	False	NA	-2	True	AATAAA	-17	NA	109093501	109088188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109090008_109090208_109092506_109092788_109093349
transcript_24629.known	chr12	-	1180	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	27.9404127862612	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5	True	NA	-2	True	AATAAA	-17	NA	109093472	109088188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
transcript_24630.nic	chr12	-	1096	4	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	54.1623075169029	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-14	True	NA	-2	True	AATAAA	-17	NA	109093491	109088188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109090008_109090208_109092506_109092938_109093349
transcript_24631.nic	chr12	-	879	3	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	5714	False	NA	-1	True	AATAAA	-18	NA	109093519	109088187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109092506_109092788_109093246
transcript_24633.nic	chr12	-	1015	3	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	15	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	5728	False	NA	-1	True	AATAAA	-18	NA	109093505	109088187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109088513_109092506_109092938_109093246
transcript_24634.known	chr12	-	895	3	FSM	ENSG00000189046.11	ENST00000619381.4	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	13	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-11	True	NA	-1	True	AATAAA	-18	NA	109093488	109088187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109088513_109092506_109092938_109093349
transcript_24635.known	chr12	+	2048	7	FSM	ENSG00000076248.11	ENST00000242576.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_1	107.67917883953	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	8	True	NA	22	True	AATAAA	-16	NA	109097596	109110992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109097812_109098431_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_24637.known	chr12	+	2130	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_5	54.2202914046024	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTAAAAGTTTGT	404	False	NA	5	True	NA	NA	NA	109098117	109110975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_2464.known	chr1	-	2628	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGAGTATGTGTTT	-10	True	NA	NA	False	AATAAA	-17	NA	35718884	35713876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_35716327_35718706
transcript_24641.known	chr12	+	2016	5	FSM	ENSG00000076248.11	ENST00000446767.2	2016	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	424.724322355101	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	-30	True	NA	22	True	AATAAA	-16	NA	109098150	109110992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109098639_109099188_109099285_109102838_109102928_109103432_109103612_109109828
transcript_24645.known	chr12	-	3920	7	FSM	ENSG00000110906.13	ENST00000228495.11	3920	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	41.4705384044572	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGGCTCTTTTC	9	True	NA	-5	True	AATAAA	-15	NA	109477300	109448654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109460635_109460806_109469514_109469729_109477259
transcript_24649.known	chr12	+	1120	9	FSM	ENSG00000151148.14	ENST00000536398.5	1120	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	43.9651850900232	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	0	True	NA	7	True	ATTAAA	-17	NA	109477634	109490722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_2465.nic	chr1	-	2203	11	ISM	ENSG00000092853.14	ENST00000318121.8	8512	25	-25	17658	-25	-2805	5prime_fragment	FALSE	canonical	2	78	junction_1	29.8529730512725	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAAAGAAATGGATAA	NA	False	NA	NA	False	AATAGA	-8	NA	35770003	35749769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_24651.known	chr12	+	1448	9	FSM	ENSG00000151148.14	ENST00000340074.9	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	48.2686168747355	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	17	True	NA	7	True	ATTAAA	-17	NA	109477651	109490722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_24653.known	chr12	+	1541	9	FSM	ENSG00000151148.14	ENST00000540230.5	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	63.4821579264599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGCATGTTCTTGAA	18	False	NA	NA	False	AAGAAA	-11	NA	109477652	109491149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109477777_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_24654.known	chr12	+	3600	8	FSM	ENSG00000151148.14	ENST00000537063.1	3600	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	36.8349878041328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTCA	20	False	NA	NA	False	NA	NA	NA	109477654	109492737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918
transcript_24656.nic	chr12	+	932	8	NIC	ENSG00000151148.14	novel	1120	9	NA	NA	0	-83	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	61.8269474304807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGTCTTTAAATTTTA	-1	True	NA	4	True	ATTAAA	-16	NA	109477633	109490639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_109477765_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_24660.known	chr12	+	2833	11	FSM	ENSG00000110921.14	ENST00000228510.8	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	17.8672885463911	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTAGGCGTGTTTA	-9	True	NA	NA	False	CATAAA	-31	NA	109573793	109598125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_24662.known	chr12	+	1770	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	33.505481401565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	34	True	NA	14	True	AATAAA	-16	NA	109573836	109597261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_24664.known	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	65.9848467452945	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	9	True	NA	-6	True	AATAAA	-11	NA	109573503	109556702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_24668.known	chr12	+	1644	9	FSM	ENSG00000110921.14	ENST00000447878.6	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	35.3579906103274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAAAAAGATTTTGT	-10	True	NA	-11	True	NA	NA	NA	109573792	109597236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_24670.known	chr12	-	4090	9	FSM	ENSG00000139428.12	ENST00000545712.7	4090	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	19.4321737075398	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	8	True	NA	NA	False	AATAAA	-40	NA	109573504	109553714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_24671.known	chr12	-	1252	9	FSM	ENSG00000139428.12	ENST00000541763.6	1252	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	53.1789432012333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCTGCAATGAGAAGGA	72	False	NA	-57	True	AATGAA	-29	NA	109573480	109556753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_24672.known	chr12	-	1089	9	FSM	ENSG00000139428.12	ENST00000544051.5	1089	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	77.0158262956387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATGAGAAGGAGCT	-2	True	NA	-54	True	AATGAA	-32	NA	109573514	109556750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
transcript_24676.nic	chr12	-	1074	8	NIC	ENSG00000139428.12	novel	4090	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	58.2604987473135	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTGTGTGTGTGTGTG	-20	True	NA	0	True	AATAAA	-17	NA	109573532	109556696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
transcript_2468.nic	chr1	-	2124	10	ISM	ENSG00000092853.14	ENST00000520551.1	4010	25	-75	14882	-25	-4322	5prime_fragment	FALSE	canonical	2	91	junction_6	24.8347625738352	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAGAGGAGGAGGAAG	NA	False	NA	-5	True	NA	NA	NA	35770003	35751286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_24680.known	chr12	-	1342	3	FSM	ENSG00000139428.12	ENST00000537236.2	1342	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	109573580	109567817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109568864_109571648_109571711_109573346
transcript_24681.known	chr12	-	945	7	FSM	ENSG00000139428.12	ENST00000540016.5	945	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	65.1809447273937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTGTGTGTGTGTGTG	15	True	NA	0	True	AATAAA	-17	NA	109573497	109556696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109573346
transcript_24686.known	chr12	-	2407	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	6.83282518435822	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-2	True	NA	-9	True	AATAAA	-22	NA	109880541	109850944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_24688.known	chr12	-	5598	20	FSM	ENSG00000139436.22	ENST00000355312.8	5598	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	25.8963414137009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	-5	True	NA	-11	True	AATAAA	-16	NA	109996368	109929803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_24689.known	chr12	-	5444	19	FSM	ENSG00000139436.22	ENST00000361006.9	5444	19	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	21.1479940968638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	10	True	NA	-11	True	AATAAA	-16	NA	109996304	109929803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_24692.known	chr12	+	3096	13	FSM	ENSG00000139437.18	ENST00000405876.9	3096	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	6.12542515531235	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTGGCTTTGTTAC	-6	True	NA	23	True	AATAAA	-18	NA	109900273	109918069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571_109906641_109907525_109907700_109908585_109908699_109908870_109908938_109911062_109911236_109912990_109913073_109914441_109914628_109915402_109915547_109916590
transcript_24697.nic	chr12	+	731	5	ISM	ENSG00000139437.18	ENST00000405876.9	3096	13	-56	11432	-46	0	5prime_fragment	FALSE	canonical	3	55	junction_4	8.55496931613434	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTATGTGGCTCT	-5	True	NA	NA	False	AAGAAA	-6	NA	109900217	109906637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571
transcript_24698.nic	chr12	+	3699	15	NIC	ENSG00000076513.17	novel	1455	12	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_1	18.7388061824348	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCAGTCTTTGAGTC	NA	False	NA	49	True	AATAAA	-28	NA	109999171	110039428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_109999320_110012004_110012138_110013124_110013250_110016387_110016434_110018344_110018489_110019138_110019329_110024045_110024113_110025741_110025824_110027704_110027767_110028511_110028643_110029477_110029636_110030644_110030759_110033796_110033958_110036260_110036329_110037358
transcript_24699.known	chr12	-	496	3	FSM	ENSG00000174456.16	ENST00000551185.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGACCTTTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	110048565	110042280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110042460_110044419_110044534_110048362
transcript_2470.nic	chr1	-	2657	8	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	22992	-25	-12432	5prime_fragment	FALSE	canonical	2	91	junction_4	25.5782113909316	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGTATTTTCTTAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	35770003	35759396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_24700.known	chr12	-	1755	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGCTGAATTCAACA	-3	True	NA	4	True	GATAAA	-24	NA	110048555	110027027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110028590_110048362
transcript_24703.known	chr12	-	724	2	FSM	ENSG00000174456.16	ENST00000615315.2	1443	2	1	718	1	87	multi-exon	FALSE	canonical	3	83	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGTTGCAAAGTGGTGT	-13	True	NA	NA	False	NA	NA	NA	110048521	110041894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110042460_110048362
transcript_24707.known	chr12	+	2710	19	FSM	ENSG00000122970.16	ENST00000552912.5	2710	19	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_1	31.2471727116092	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTAAAAAATGTA	-28	True	NA	1	True	AATAAA	-16	NA	110124334	110218775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110124444_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_24709.known	chr12	+	3124	19	FSM	ENSG00000122970.16	ENST00000242591.10	3124	19	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	32.4161311009743	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTTGTGTCAAA	-6	True	NA	19	True	AATAAA	-34	NA	110124356	110218793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_24716.known	chr12	+	3048	12	FSM	ENSG00000122970.16	ENST00000361948.8	3048	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	57.4552646675353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAATGAGCCTCCCTG	-28	True	NA	NA	False	AGTAAA	-16	NA	110124334	110169182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110167870
transcript_24724.known	chr12	+	4453	21	FSM	ENSG00000174437.18	ENST00000308664.10	4453	21	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_20	116.224556355359	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	484	False	NA	NA	False	AATAAA	-14	NA	110281115	110351090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200_110346322_110350291
transcript_24725.known	chr12	+	8295	20	FSM	ENSG00000174437.18	ENST00000539276.7	8295	20	0	0	0	0	multi-exon	FALSE	canonical	2	328	junction_12	52.6521538731249	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGTGGTGGTGACT	-23	True	NA	NA	False	AATAAA	-17	NA	110281246	110351093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200
transcript_24730.known	chr12	-	3023	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	39.0466387797977	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTCTTTCAGTCTA	-12	True	NA	-2	True	AAAAAG	-3	NA	110403708	110372899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_24736.known	chr12	-	2200	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_6	37.2870082958438	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACAGAAGTGGTTTCTT	-34	True	NA	NA	False	AATAAA	-20	NA	110403730	110375476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_24748.known	chr12	-	946	7	FSM	ENSG00000111229.16	ENST00000228825.12	946	7	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_6	127.388731404661	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAGTGTACAATTCA	-5	True	NA	53	True	GATAAA	-20	NA	110450337	110434822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110435218_110436109_110436205_110436556_110436684_110437083_110437153_110440311_110440389_110445451_110445552_110450254
transcript_24755.known	chr12	-	555	3	FSM	ENSG00000111229.16	ENST00000471641.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATTATATATATTTT	47	False	NA	NA	False	AATAAA	-24	NA	110450285	110442643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110443068_110445451_110445552_110450254
transcript_24757.known	chr12	-	1491	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	223.69841213526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTGCAGTGTCTAATT	-11	True	NA	-16	True	TATAAA	-42	NA	110468264	110452488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
transcript_24758.known	chr12	-	1457	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_4	43.0377148319841	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-4	True	NA	-13	True	TATAAA	-45	NA	110468257	110452485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
transcript_24763.known	chr12	-	1604	8	FSM	ENSG00000111231.9	ENST00000543199.5	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	220.949712627566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCAGTGTCTAATTTG	547	False	NA	-14	True	TATAAA	-44	NA	110468721	110452486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468471
transcript_24768.known	chr12	+	1101	7	FSM	ENSG00000204856.12	ENST00000377673.10	1101	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	21.646144126739	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	-17	True	NA	12	True	ATTAAA	-18	NA	110468844	110490385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486455_110486533_110486718_110487860_110487944_110490018
transcript_2477.nic	chr1	-	870	4	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	26762	-25	-16202	5prime_fragment	FALSE	canonical	3	132	junction_1	19.1543438647449	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAGGCAAGTAAAGCAT	NA	False	NA	NA	False	AGTAAA	-4	NA	35770003	35763166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35763322_35764265_35764715_35765217_35765327_35769846
transcript_24783.known	chr12	-	1059	6	FSM	ENSG00000111237.19	ENST00000546588.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	883.81455068357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAATCTAGACTTTCTT	6	True	NA	-74	True	NA	NA	NA	110502092	110491690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110501416_110501560_110502048
transcript_2479.nic	chr1	-	696	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	27880	-25	-17320	5prime_fragment	FALSE	canonical	3	143	junction_1	17	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAACAAAAAACCAGG	NA	False	NA	13	True	NA	NA	NA	35770003	35764284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_24793.known	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	860.546919115977	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-1	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
transcript_24798.known	chr12	-	996	5	FSM	ENSG00000111237.19	ENST00000447578.6	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	901.522046319445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGATAACCTGTATT	20	True	NA	-8	True	AATAAA	-17	NA	110502078	110491624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110502048
transcript_24799.known	chr12	-	818	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	881.41987724353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTTCTCTGTTAATA	-13	True	NA	33	True	AGTAAA	-7	NA	110502111	110491885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
transcript_24809.known	chr12	-	1531	4	FSM	ENSG00000111237.19	ENST00000549578.6	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1497	junction_3	162.485554913523	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAACAAA	-13	True	NA	NA	False	AAAACA	-4	NA	110502111	110491082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110502048
transcript_2481.nic	chr1	-	637	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-75	27939	-25	-17379	5prime_fragment	FALSE	canonical	3	143	junction_1	17	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAGAAGACTTGAGAA	NA	False	NA	-46	True	AGTAAA	-2	NA	35770003	35764343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_24819.known	chr12	+	1891	16	FSM	ENSG00000204852.17	ENST00000480648.5	1891	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	31.6852577006335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTACATTCGGTGAG	34	True	NA	-15	True	AATATA	-14	NA	110614167	110649085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_24821.known	chr12	+	1879	15	FSM	ENSG00000204852.17	ENST00000397655.7	1879	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	33.0448056988306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	-21	True	NA	28	True	ATTAAA	-18	NA	110614112	110649128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_24823.known	chr12	+	2222	15	FSM	ENSG00000204852.17	ENST00000397659.9	2222	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	29.9633279261193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCTGTCGCAATAGTT	-5	True	NA	NA	False	NA	NA	NA	110614128	110649430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647195_110647337_110647748_110647894_110649042
transcript_24824.known	chr12	+	2309	15	FSM	ENSG00000204852.17	ENST00000551590.5	2309	15	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_10	23.5978207226249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCTGTCGCAATAGTT	NA	False	NA	NA	False	NA	NA	NA	110614026	110649430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_24826.known	chr12	+	1988	15	FSM	ENSG00000204852.17	ENST00000495659.6	1988	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	29.8807152333598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	-27	True	NA	28	True	ATTAAA	-18	NA	110614106	110649128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614464_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_24829.nic	chr12	+	1788	14	NIC	ENSG00000204852.17	novel	2309	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	29.3556038822222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTCCAGCTTTGTTG	-11	True	NA	26	True	ATTAAA	-16	NA	110614122	110649126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_110614403_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_24836.known	chr12	+	1531	12	FSM	ENSG00000204852.17	ENST00000549123.6	1531	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	26.4996491478411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	-21	True	NA	28	True	ATTAAA	-18	NA	110614112	110649128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110647210_110647337_110647748_110647894_110649042
transcript_2484.known	chr1	+	548	3	FSM	ENSG00000126070.20	ENST00000491443.2	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTGTCTCGAAGTA	NA	False	NA	4	True	CATAAA	-18	NA	35966954	35973592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_35967076_35972023_35972233_35973374
transcript_24845.known	chr12	-	1685	8	FSM	ENSG00000122986.14	ENST00000242607.13	1685	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	13.1738764381697	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCAAGACTCCACTATA	9	True	NA	86	True	NA	NA	NA	110689115	110648685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689079
transcript_24846.nic	chr12	-	1742	8	NIC	ENSG00000122986.14	novel	1685	8	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	23.9148148089618	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTTTCCCTGGACC	8784	False	NA	-25	True	AATAAA	-22	NA	110689929	110648796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689725
transcript_2485.known	chr1	+	1490	10	FSM	ENSG00000092850.12	ENST00000207457.8	1490	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.69623074369749	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	-6	True	NA	2	True	AATAAA	-15	NA	36084093	36088275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36084150_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
transcript_24850.known	chr12	-	1215	7	FSM	ENSG00000122986.14	ENST00000439744.6	1215	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.1969918946619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTAGTTGTATATAAA	1	True	NA	NA	False	NA	NA	NA	110689778	110649132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110688624_110688709_110689725
transcript_24854.known	chr12	+	2149	4	FSM	ENSG00000204852.17	ENST00000550703.6	2149	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.2249721603218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTATTTTGTCTCTT	NA	False	NA	40	True	AATAGA	-27	NA	110614026	110630287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766
transcript_2486.known	chr1	+	1651	6	FSM	ENSG00000116863.11	ENST00000373178.5	1651	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	27.9971427113554	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	-2	True	NA	13	True	AATAAA	-20	NA	36088891	36093932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36089116_36091243_36091341_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_24864.known	chr12	+	1044	3	FSM	ENSG00000185847.9	ENST00000654512.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGTGTAAGGAAGAAAA	-7	True	NA	NA	False	AATATA	-34	NA	110936573	110943763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289_110938513_110943067
transcript_24868.known	chr12	+	674	3	FSM	ENSG00000185847.9	ENST00000547607.2	1834	3	24	1136	5	-1132	multi-exon	FALSE	canonical	0	0	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCGTGTTCTCTCTCT	26	False	NA	NA	False	NA	NA	NA	110936606	110956832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289_110938513_110956473
transcript_24869.known	chr12	+	364	2	FSM	ENSG00000185847.9	ENST00000331096.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTAGATTTCAT	21	False	NA	NA	False	AATAAA	-21	NA	110936601	110937451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110937184
transcript_2487.nic	chr1	+	1040	6	ISM	ENSG00000116871.16	ENST00000373148.5	1797	10	1501	-17	-51	0	3prime_fragment	FALSE	canonical	3	371	junction_1	44.5528899174902	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	490	False	NA	15	True	AATAAA	-16	NA	36178969	36180849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_24870.known	chr12	+	1319	2	FSM	ENSG00000185847.9	ENST00000666099.2	1323	2	4	0	-2	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTATCATGTTACACGTT	6	True	NA	NA	False	AATAAA	-16	NA	110936586	110939496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289
transcript_24871.known	chr12	+	1607	2	FSM	ENSG00000185847.9	ENST00000657482.1	1607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGACTCCTTT	2	True	NA	NA	False	AATAAA	-20	NA	110936582	110957964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110956473
transcript_24872.known	chr12	+	717	3	FSM	ENSG00000185847.9	ENST00000548368.6	717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCTAAAATTTTCTGA	2	True	NA	NA	False	NA	NA	NA	110936582	110943701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_110936699_110938289_110938513_110943323
transcript_24873.known	chr12	+	335	3	FSM	ENSG00000257595.3	ENST00000552663.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGGGTCTCAGCGAGC	NA	False	NA	13	True	AATAAA	-16	NA	111369260	111403310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111369321_111371968_111372071_111403137
transcript_24874.nic	chr12	-	1654	10	ISM	ENSG00000089234.16	ENST00000327551.6	1947	12	3883	0	3883	0	3prime_fragment	FALSE	canonical	3	229	junction_7	14.4529889257859	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGCTCTTTCATTT	4126	False	NA	-16	True	NA	NA	NA	111681837	111644081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636
transcript_24875.known	chr12	+	4006	21	FSM	ENSG00000111271.15	ENST00000313698.9	4006	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	14.8521883909409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	-25	True	NA	14	True	AGTAAA	-15	NA	111686052	111757099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_24879.known	chr12	+	2888	13	FSM	ENSG00000111271.15	ENST00000549590.5	2888	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_11	14.7561192579741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGCGATTCTCCTGCCT	-7	True	NA	NA	False	NA	NA	NA	111686070	111745634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642
transcript_24880.known	chr12	-	543	4	FSM	ENSG00000234608.9	ENST00000590479.6	772	4	220	9	0	-4	multi-exon	FALSE	canonical	3	32	junction_3	61.3967063901278	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTTTACTTACTTTGAG	251	False	NA	-18	True	AATAAA	-13	NA	111841710	111839776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111840332_111840478_111841326_111841471_111841683
transcript_24881.known	chr12	-	1957	3	FSM	ENSG00000234608.9	ENST00000456429.6	1961	3	0	4	0	0	multi-exon	FALSE	canonical	3	78	junction_1	50.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	NA	False	NA	-9	True	AATAAA	-22	NA	111842902	111839767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111840332_111840478_111841326
transcript_24882.known	chr12	-	662	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	5	-7	0	multi-exon	FALSE	canonical	3	22	junction_2	28	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	-3	True	NA	-9	True	AATAAA	-22	NA	111841964	111839767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111840332_111840478_111841683
transcript_24885.nnic	chr12	-	645	3	FSM	ENSG00000234608.9	ENST00000688987.1	627	3	-23	5	2	0	multi-exon	FALSE	canonical	3	32	junction_2	24.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	-6	True	NA	-14	True	AATAAA	-17	NA	111841953	111839772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111841326_111841471_111841683
transcript_24887.known	chr12	-	852	3	FSM	ENSG00000234608.9	ENST00000656227.2	1067	3	210	5	20	0	multi-exon	FALSE	canonical	3	32	junction_2	73.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	275	False	NA	-14	True	AATAAA	-17	NA	111841686	111839772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840478_111841326_111841471_111841683
transcript_24889.known	chr12	-	930	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	3	-5	1	multi-exon	FALSE	canonical	3	22	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	59	False	NA	-8	True	AATAAA	-23	NA	111841902	111839766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840478_111841683
transcript_2489.known	chr1	-	1056	5	FSM	ENSG00000054116.12	ENST00000373162.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	190.810115035865	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGCGATATAGTCCAT	-11	True	NA	-27	True	AATAAA	-4	NA	36149497	36137053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149091
transcript_24890.nnic	chr12	-	888	2	FSM	ENSG00000234608.9	ENST00000692189.1	877	2	-26	15	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	NA	False	NA	-14	True	AATAAA	-17	NA	111841983	111839772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111841326
transcript_24891.known	chr12	-	2290	2	FSM	ENSG00000234608.9	ENST00000428207.4	2290	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTCTTTTGTTCTAG	NA	False	NA	-5	True	AATAAA	-26	NA	111842902	111839763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840478_111841326
transcript_24892.known	chr12	-	1785	2	FSM	ENSG00000234608.9	ENST00000656209.1	1785	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGACCGTTTACTTA	-2	True	NA	-25	True	AATAAA	-6	NA	111841897	111839783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111840004_111840332
transcript_249.nnic	chr1	-	917	8	NNC	ENSG00000184163.3	novel	1036	8	NA	NA	-535	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	7.46146563268605	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTGCCTTCGAGTGCTG	NA	False	NA	-13	True	AATAAA	-16	NA	1247257	1242452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1247167
transcript_2490.known	chr1	-	1282	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_2	27.0416345659799	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	0	True	NA	0	True	AATAAA	-26	NA	36149486	36136571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
transcript_24900.nic	chr12	-	1639	11	NIC	ENSG00000198270.13	novel	1716	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	14.5811522178462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	32	False	112013185	-13	True	AATAAA	-18	NA	112013169	111931297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111965594_111965760_111991757_111991890_112005256_112005304_112013001
transcript_24902.known	chr12	-	1534	11	FSM	ENSG00000198270.13	ENST00000552374.7	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	9.61301201497221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-17	True	NA	-13	True	AATAAA	-18	NA	112013165	111931297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_24909.known	chr12	-	1446	10	FSM	ENSG00000198270.13	ENST00000550831.7	1446	10	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	7.38533749239283	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	23	True	NA	3	True	AATAAA	-34	NA	112013125	111931281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_2491.known	chr1	-	1336	5	FSM	ENSG00000054116.12	ENST00000616395.4	1336	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	197.68962415868	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	6437	False	NA	2	True	AATAAA	-28	NA	36149514	36136569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36139719_36139844_36140068_36140167_36149336
transcript_24912.known	chr12	-	1403	10	FSM	ENSG00000198270.13	ENST00000355445.7	1403	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	14.4179243724565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	9	True	NA	-13	True	AATAAA	-18	NA	112013139	111931297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_24914.nic	chr12	-	1456	10	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	14.5907124188262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	NA	False	NA	-13	True	AATAAA	-18	NA	112013226	111931297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_24918.known	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	14.2038727113418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	13	True	NA	-85	True	NA	NA	NA	112013135	111931369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_24931.known	chr12	-	2761	1	FSM	ENSG00000198270.13	ENST00000437003.3	2761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTGTCCACGTACC	0	True	NA	-6	True	AATAAA	-21	NA	112013185	112010424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112010400_112013200
transcript_24939.known	chr12	+	1333	2	FSM	ENSG00000089248.7	ENST00000455836.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAATATATTGAACCAA	NA	False	NA	NA	False	NA	NA	NA	112013347	112023220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112013610_112022149
transcript_24940.known	chr12	+	1623	3	FSM	ENSG00000089248.7	ENST00000261735.4	1623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1769	junction_2	104	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTTTCTTCAGAC	-14	True	NA	NA	False	AATAAA	-44	NA	112013425	112023449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112013610_112019755_112019895_112022149
transcript_24942.known	chr12	-	5771	24	FSM	ENSG00000111300.10	ENST00000261745.9	5771	24	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_9	20.2703840321064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGGTTCCTTTTT	5	True	NA	1	True	TATAAA	-22	NA	112108783	112026688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112029654_112033232_112033380_112039228_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_24946.known	chr12	-	2815	23	FSM	ENSG00000111300.10	ENST00000551858.1	2815	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	53.4921211468884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAGAAA	9	True	NA	NA	False	ACTAAA	-6	NA	112108779	112039269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112097240_112097442_112108715
transcript_24947.nic	chr12	-	2673	22	ISM	ENSG00000111300.10	ENST00000261745.9	5771	24	-47	12573	-34	0	5prime_fragment	FALSE	canonical	3	137	junction_7	21.1423208855202	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAGAAAC	NA	False	NA	NA	False	AAAAAG	-1	NA	112108830	112039261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_24949.nic	chr12	-	2554	21	NIC	ENSG00000111300.10	novel	2815	23	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	39.5138899628979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAGAAAC	NA	False	NA	NA	False	AAAAAG	-1	NA	112108830	112039261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112090725_112090865_112093050_112093137_112108715
transcript_24951.nnic	chr12	-	852	7	NNC	ENSG00000111300.10	novel	421	5	NA	NA	-34	350	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	72.165127004361	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGACTGTCTTTTTATT	NA	False	NA	NA	False	ATTAAA	-19	NA	112108830	112078331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_112078542_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_24952.known	chr12	-	5815	23	FSM	ENSG00000111300.10	ENST00000552527.5	5815	23	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_8	20.6382157759149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAACTTTGTGTGTGTCTG	3	True	NA	-5	True	CATAAA	-19	NA	112108785	112027787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112029654_112033232_112033380_112039228_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_24953.known	chr12	+	2633	12	FSM	ENSG00000135148.12	ENST00000412615.7	2633	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	23.7211765069955	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	10	True	NA	15	True	AATAAA	-19	NA	112125559	112153604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_24960.known	chr12	-	1074	7	FSM	ENSG00000089009.16	ENST00000424576.6	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	1596	junction_6	3326.90291412298	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGACTACATTTTGTG	5	True	NA	-31	True	NA	NA	NA	112409596	112405202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409410
transcript_24962.known	chr12	-	921	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	0	0	0	multi-exon	FALSE	canonical	3	6502	junction_6	1562.22177967435	16639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCTTTTTTTAAT	-4	True	NA	-17	True	ATTAAA	-14	NA	112409605	112405188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_24963.known	chr12	+	6073	16	FSM	ENSG00000179295.19	ENST00000351677.7	6073	16	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_6	68.2894493233683	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGTTTGCTTCATCAG	5	True	NA	4	True	AATAAA	-23	NA	112418946	112509918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
transcript_24964.known	chr12	+	3455	9	FSM	ENSG00000135144.8	ENST00000257600.3	3455	9	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	8.38059514593087	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTCTTTTCCTGCCAA	-3	True	NA	18	True	AATAAA	-18	NA	113057689	113098028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113058452_113077423_113078106_113093161_113093224_113093538_113093701_113094037_113094100_113094788_113094948_113095041_113095204_113095324_113095415_113096714
transcript_24967.known	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	75.2200833675971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-7	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_24969.known	chr12	-	4380	20	FSM	ENSG00000123064.13	ENST00000314045.11	4380	20	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	77.4222870129512	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAGGGTGAACTTA	-8	True	NA	-2	True	AATAAA	-25	NA	113185479	113157173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113159113_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_24972.known	chr12	+	1858	4	FSM	ENSG00000139405.16	ENST00000548278.2	1858	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	17.6131264181639	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCACTTTTTTTCCC	2	True	NA	22	True	AATAGA	-18	NA	113185720	113192368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113186022_113186184_113186317_113186682_113187049_113191309
transcript_24976.known	chr12	+	1898	3	FSM	ENSG00000139405.16	ENST00000552495.1	1898	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	109.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCATGAATGTCACTTT	-3	True	NA	15	True	AATAGA	-11	NA	113185541	113192361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113186022_113186682_113187049_113191309
transcript_24977.known	chr12	+	369	1	FSM	ENSG00000139405.16	ENST00000615042.1	369	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGTGAACTCCCTATC	500	False	NA	7	True	AATAAA	-18	NA	113186935	113187304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113186900_113187300
transcript_24979.known	chr12	-	1670	5	FSM	ENSG00000166578.10	ENST00000416617.3	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.34477204006491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	1	True	NA	-8	True	AATAAA	-23	NA	113221094	113195445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113195890_113197540_113197613_113200579_113200814_113207437_113208260_113220996
transcript_24983.nnic	chr12	-	1440	4	NIC	ENSG00000166578.10	novel	1670	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.23609564462324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	-3	True	NA	-8	True	AATAAA	-23	NA	113221098	113195445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_113195890_113197540_113197613_113207437_113208260_113220996
transcript_24985.known	chr12	-	1369	3	FSM	ENSG00000166578.10	ENST00000299732.6	1369	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACGCTCTACGAATAAA	1	True	NA	-3	True	AATAAA	-28	NA	113221094	113195440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113195890_113207437_113208260_113220996
transcript_24989.known	chr12	-	3510	16	FSM	ENSG00000089060.12	ENST00000680972.1	3510	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	19.5907007418202	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGAGAAAATGACACCC	14	True	NA	-16	True	AATAAA	-20	NA	113335109	113298770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334442
transcript_24991.known	chr12	+	4787	12	FSM	ENSG00000151176.8	ENST00000280800.5	4787	12	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_10	12.5052055276695	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTTATCTTATTT	16	True	NA	17	True	AATAAA	-31	NA	113358586	113391629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113358891_113369115_113369210_113372648_113372808_113374473_113374575_113374792_113375008_113380744_113380843_113384104_113384266_113384850_113384947_113385211_113385284_113386936_113387090_113387743_113387907_113388458
transcript_24992.known	chr12	+	1306	8	FSM	ENSG00000139410.15	ENST00000403593.9	1306	8	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_6	3.45820526768863	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	-13	True	NA	18	True	AATAAA	-16	NA	113422379	113438276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113422478_113427961_113428157_113428419_113428460_113429159_113429300_113434133_113434223_113435328_113435557_113436750_113436876_113437885
transcript_24994.known	chr12	+	522	2	FSM	ENSG00000257935.3	ENST00000551357.3	545	2	11	12	0	-3	multi-exon	FALSE	canonical	2	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACGAATCTGCCCT	-10	True	NA	NA	False	AATAAA	-40	NA	113472002	113480624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_113472083_113480182
transcript_24995.known	chr12	-	435	3	FSM	ENSG00000249550.8	ENST00000657279.1	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTTGTAGCAATTTAT	-5	True	NA	NA	False	AATAAA	-20	NA	113773686	113750497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113750727_113767074_113767209_113773614
transcript_24996.known	chr12	-	626	3	FSM	ENSG00000249550.8	ENST00000661033.2	627	3	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTGCCTCTTCCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	113773724	113735840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113736223_113767074_113767209_113773614
transcript_24997.known	chr12	-	3574	25	FSM	ENSG00000122965.11	ENST00000392561.7	3574	25	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	60.9876894454028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTCTTCATT	20	False	NA	-1	True	AGTAAA	-25	NA	113966310	113822053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113822647_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_24998.known	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_11	27.0585726084508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	5	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_25.known	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00071_+_0_600
transcript_2500.known	chr1	-	1114	3	FSM	ENSG00000054116.12	ENST00000616074.4	1114	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	244	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	6437	False	NA	2	True	AATAAA	-28	NA	36149514	36136569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36137795_36137979_36149336
transcript_25000.nic	chr12	-	440	3	ISM	ENSG00000122965.11	ENST00000261741.10	4148	24	-15	138014	-15	-2208	5prime_fragment	FALSE	canonical	3	385	junction_1	25.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTAAGAAAGTATGTAA	-10	True	NA	NA	False	NA	NA	NA	113966340	113960070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_113960179_113962231_113962415_113966191
transcript_25001.known	chr12	-	1265	2	FSM	ENSG00000122965.11	ENST00000553232.1	1265	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCATAATAATAATTTAT	2063	False	NA	NA	False	AATAAA	-15	NA	113818179	113816737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_113817926_113818102
transcript_25004.known	chr12	+	543	2	FSM	ENSG00000196668.4	ENST00000489452.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTCTGTCGGGAAT	43	False	NA	NA	False	NA	NA	NA	116533467	116534359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_116533617_116533965
transcript_25007.known	chr12	-	5789	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGACATTTGTGTTTT	-2	True	NA	-3	True	ATTAAA	-21	NA	116881441	116856143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_116861467_116880975
transcript_25008.known	chr12	+	4648	11	FSM	ENSG00000174989.13	ENST00000455858.2	4648	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	21.9565479982624	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGTCAAGTTATTTT	-13	True	NA	14	True	ATTAAA	-14	NA	116910964	117031148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_116911158_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
transcript_25010.known	chr12	-	989	8	FSM	ENSG00000088992.18	ENST00000335209.12	989	8	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_3	14.7979590429469	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	-2	True	NA	2	True	AATAAA	-26	NA	117099416	117038922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046776_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
transcript_25012.known	chr12	-	5976	12	FSM	ENSG00000135108.16	ENST00000622495.5	5976	12	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	61.7641475077198	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGCTCAAACACCATAG	5	True	NA	-16	True	AATAAA	-17	NA	117190470	117141990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_25013.known	chr12	-	2906	12	FSM	ENSG00000135108.16	ENST00000330622.9	2906	12	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	110.461690752799	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTGAAGGGAAAAAAAG	19	True	NA	45	True	AATGAA	-20	NA	117190456	117145067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_117146278_117155790_117155949_117157872_117158085_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_2502.known	chr1	-	221	2	FSM	ENSG00000054116.12	ENST00000469757.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCGGATGAGATTCATC	-10	True	NA	NA	False	NA	NA	NA	36149496	36137261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36137323_36149336
transcript_25020.known	chr12	-	4138	13	NNC	ENSG00000135108.16	novel	5976	12	NA	NA	-1	1268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	152.835128124685	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAAATGGCCTGCCCAAT	4	True	NA	-24	True	AATAAA	-22	NA	117190471	117143780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217_117190278_117190326
transcript_25033.known	chr12	+	2449	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	129.869864934795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-16	True	NA	14	True	AATAAA	-24	NA	118016721	118032234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_25037.known	chr12	+	2104	11	FSM	ENSG00000111445.14	ENST00000454402.7	2104	11	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_5	40.1254283466233	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-35	True	NA	14	True	AATAAA	-24	NA	118016702	118032234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_2504.known	chr1	+	4405	12	FSM	ENSG00000054118.15	ENST00000354618.10	4405	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	161.828396000412	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	-8	True	NA	20	True	AATAAA	-24	NA	36224442	36305357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_25042.nnic	chr12	+	1006	9	NNC	ENSG00000111445.14	novel	2104	11	NA	NA	0	476	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	118.42871009599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTGCCCGGGTTTGGA	-37	True	NA	23	True	ATTAAA	-17	NA	118016700	118027868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027782
transcript_25045.known	chr12	-	2855	9	FSM	ENSG00000176871.9	ENST00000315436.8	2855	9	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	46.6072352215834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGTGGTGCTGGTGTG	5	True	NA	NA	False	AATAAA	-21	NA	118061179	118032686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118061035
transcript_25047.known	chr12	-	687	1	FSM	ENSG00000176871.9	ENST00000614776.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCTTTTTCCTTT	1960	False	NA	1	True	NA	NA	NA	118036384	118035697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118035700_118036400
transcript_25051.known	chr12	-	694	4	FSM	ENSG00000176834.14	ENST00000539956.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.02768199119819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGAGTCTCGCACTGT	2020	False	NA	NA	False	NA	NA	NA	118136026	118117666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118117883_118121500_118121619_118126480_118126671_118135856
transcript_25053.nnic	chr12	-	1145	3	NIC	ENSG00000176834.14	novel	694	4	NA	NA	24	-28	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATAAAGTATTGCT	-8	True	NA	NA	False	AAAAAG	-8	NA	118136002	118117073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_118117883_118126480_118126671_118135856
transcript_25054.known	chr12	+	1431	4	FSM	ENSG00000089220.5	ENST00000261313.3	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	5779	junction_2	216.953143942803	4105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTCCCCGGATGT	-2	True	NA	15	True	AATAAA	-19	NA	118136123	118145584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118136345_118138038_118138149_118139450_118139552_118144585
transcript_2506.nic	chr1	+	2259	7	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-56	12672	-45	-1484	5prime_fragment	FALSE	canonical	0	0	junction_4	201.563610031397	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAAAGCCCAGAGATAC	NA	False	NA	NA	False	ACTAAA	-39	NA	36224386	36292685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597
transcript_25060.known	chr12	-	4346	21	FSM	ENSG00000135090.14	ENST00000392533.8	4346	21	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	7.30941174103635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTTGCTGTGTTATTGT	4	True	NA	-4	True	AATAAA	-14	NA	118372907	118149800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_25064.nic	chr12	-	1338	12	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	37	51560	19	61	5prime_fragment	FALSE	canonical	3	45	junction_5	7.8213524226318	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAATACTTTTCCAA	3706	False	NA	NA	False	NA	NA	NA	118372870	118201360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_25066.known	chr12	-	2147	8	FSM	ENSG00000135090.14	ENST00000537952.1	2147	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	5.12297745058317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAGAAAAAAATTCAG	10	True	NA	NA	False	ATTAAA	-34	NA	118190545	118150956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806
transcript_25067.nic	chr12	-	319	2	ISM	ENSG00000135090.14	ENST00000542692.1	588	4	-37	11128	-23	-11128	5prime_fragment	FALSE	canonical	3	74	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAGAGAAGTTTGCTG	-19	True	NA	NA	False	TATAAA	-2	NA	118372930	118266723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_118266760_118372647
transcript_25068.known	chr12	+	879	1	FSM	ENSG00000240342.3	ENST00000488803.1	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGTTTTTATACAAGAAA	24	False	NA	NA	False	NA	NA	NA	118246083	118246962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_118246100_118247000
transcript_25069.known	chr12	-	530	3	FSM	ENSG00000255618.2	ENST00000668907.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	NA	False	NA	0	True	AATAAA	-22	NA	118774578	118773030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_118773303_118773610_118773776_118774485
transcript_25072.known	chr12	+	1861	3	FSM	ENSG00000152137.8	ENST00000281938.7	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	6	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTGGTTCTTTTAA	1	True	NA	18	True	AATAAA	-17	NA	119178930	119194746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_119179680_119187024_119187089_119193698
transcript_25073.known	chr12	-	693	4	FSM	ENSG00000248636.7	ENST00000537366.5	693	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATCTTCTTTTATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	119668079	119387986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_119388329_119402314_119402431_119553547_119553646_119667942
transcript_25075.known	chr12	+	2303	8	FSM	ENSG00000111725.11	ENST00000541640.5	2303	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	92.2463427735866	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGGAGGAGCTCT	-12	True	NA	20	True	AATAAA	-21	NA	119667863	119681624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_119668046_119668235_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_25076.nic	chr12	+	2669	8	NIC	ENSG00000111725.11	novel	2219	7	NA	NA	-7	0	intron_retention	TRUE	canonical	3	14	junction_2	120.977818847346	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	NA	False	NA	15	True	AATAAA	-16	NA	119667856	119681619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_119668404_119671494_119671669_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_25077.known	chr12	+	2219	7	FSM	ENSG00000111725.11	ENST00000229328.10	2219	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	27.1149815087937	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	-6	True	NA	15	True	AATAAA	-16	NA	119668132	119681619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_25080.nic	chr12	-	1100	7	ISM	ENSG00000122966.17	ENST00000612548.4	1799	13	-24	144741	8	-50345	5prime_fragment	FALSE	canonical	3	45	junction_5	7.06320670013903	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTGCCTGTTATAGA	8	True	NA	NA	False	AATAAA	-30	NA	119877312	119832500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_119832865_119834085_119834229_119850173_119850276_119857522_119857699_119869059_119869202_119876072_119876182_119877248
transcript_25082.known	chr12	-	2855	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	1.74355957741627	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCCAGGGTCTGTTT	2	True	NA	-9	True	AATAAA	-17	NA	120116753	120095098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
transcript_25084.nic	chr12	-	1981	14	ISM	ENSG00000089154.11	ENST00000300648.7	8681	58	-6	45860	-6	2728	5prime_fragment	FALSE	canonical	3	219	junction_13	28.8039691544977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACTGGTTTAAAAAAT	-5	True	NA	NA	False	NA	NA	NA	120194721	120173061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_25087.known	chr12	-	8681	58	FSM	ENSG00000089154.11	ENST00000300648.7	8681	58	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_43	100.435343546495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACCTGTTTTTGTA	1	True	NA	16	True	ATTAAA	-32	NA	120194715	120127201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591_120155720_120156460_120156605_120156911_120156993_120157848_120158031_120158459_120158616_120159824_120160024_120160141_120160256_120161489_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_25098.known	chr12	-	1105	8	FSM	ENSG00000089157.16	ENST00000392514.9	1105	8	0	0	0	0	multi-exon	FALSE	canonical	3	11932	junction_7	3195.29281977124	27981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	-4	True	NA	-13	True	AATAAA	-22	NA	120201111	120196698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_25099.known	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_2	7657.29831961349	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	0	True	NA	-16	True	AATAAA	-19	NA	120201107	120196701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_251.known	chr1	-	1256	8	FSM	ENSG00000160087.21	ENST00000464036.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	231.886671827918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCTTTGGAGGAGAC	-20	True	NA	NA	False	TTTAAA	-34	NA	1273864	1255047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1262268_1262391_1263345_1263387_1267861_1267993_1273665
transcript_25100.known	chr12	-	1344	7	FSM	ENSG00000089157.16	ENST00000551150.5	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	19833	junction_5	712.395411426984	2595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	8	False	NA	-13	True	AATAAA	-22	NA	120201099	120196698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729
transcript_25101.known	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	7355.81593859233	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-3	True	NA	-22	True	AATAAA	-13	NA	120201110	120196707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
transcript_25102.known	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	7495.46111636494	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-3	True	NA	-16	True	AATAAA	-19	NA	120201110	120196701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_25103.known	chr12	-	3785	12	FSM	ENSG00000089159.17	ENST00000228307.11	3785	12	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	230.274575594635	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	NA	False	NA	-14	True	AATAAA	-19	NA	120265771	120210446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_25104.known	chr12	-	3683	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_5	88.5630284035048	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	NA	False	NA	-14	True	AATAAA	-19	NA	120265771	120210446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_25105.known	chr12	-	3835	11	FSM	ENSG00000089159.17	ENST00000267257.11	3835	11	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_5	207.157041878861	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTATTTCTTGGTGGTC	NA	False	NA	-6	True	AATAAA	-27	NA	120265771	120210438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_25107.known	chr12	+	1170	5	FSM	ENSG00000255857.7	ENST00000535200.2	1199	5	29	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_4	68.1432315054107	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGAGGCGGATC	18	True	NA	NA	False	NA	NA	NA	120201370	120213138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929_120211107_120212374
transcript_25108.known	chr12	+	707	4	FSM	ENSG00000255857.7	ENST00000542314.6	780	4	36	37	2	-37	multi-exon	FALSE	canonical	3	16	junction_3	68.762069647606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAAATAAAATCAAA	0	True	NA	-29	True	CATAAA	-42	NA	120201326	120210519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210085
transcript_25109.known	chr12	+	2525	4	FSM	ENSG00000255857.7	ENST00000667017.1	2525	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	61.2989033797143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTGAAAATACAAAAAA	3	True	NA	NA	False	NA	NA	NA	120201355	120213210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929
transcript_25111.known	chr12	+	1166	4	FSM	ENSG00000255857.7	ENST00000542265.7	1183	4	17	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	16.0069429380573	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCATGGGGGCGTG	206	False	NA	NA	False	AATACA	-7	NA	120201290	120213231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120212374
transcript_25114.known	chr12	+	443	1	FSM	ENSG00000255857.7	ENST00000620336.1	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGGTCTCACTATATT	514	False	NA	14	True	AATAAA	-14	NA	120212326	120212769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120212300_120212800
transcript_25116.known	chr12	+	1217	4	FSM	ENSG00000089163.4	ENST00000202967.4	1217	4	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	0.816496580927726	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGAATTTGTGTGT	8617	False	NA	21	True	AATAAA	-24	NA	120302320	120313249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120302379_120303560_120304059_120312455_120312751_120312883
transcript_25117.nic	chr12	+	1168	2	ISM	ENSG00000089163.4	ENST00000202967.4	1217	4	-21	8600	-16	591	5prime_fragment	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAGTTGAGGA	8596	False	NA	NA	False	AAAAAG	-7	NA	120302299	120304649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_120302379_120303560
transcript_25123.known	chr12	+	4238	4	FSM	ENSG00000257218.6	ENST00000551765.6	4238	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	22.573337271116	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCATGAATGCATACTT	-8	True	NA	NA	False	AATAAA	-18	NA	120446443	120463749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120446562_120446656_120446830_120457075_120457180_120459906
transcript_25128.known	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3982	junction_2	243.798186120315	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-42	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
transcript_2513.known	chr1	+	3339	13	FSM	ENSG00000054118.15	ENST00000469141.6	3339	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	223.293839791627	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACCGCGAGAGGCATCC	-19	True	NA	NA	False	NA	NA	NA	36224431	36304148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36224506_36224970_36225103_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_25130.known	chr12	+	537	3	FSM	ENSG00000111775.3	ENST00000229379.3	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_2	410	1136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTCATGAGCTGAGAG	-3	True	NA	27	True	AATAAA	-14	NA	120438112	120440730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120438230_120438378_120438522_120440453
transcript_25133.known	chr12	-	1153	2	FSM	ENSG00000170855.4	ENST00000302432.3	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTTGGAATAGCTGTG	1079	False	NA	NA	False	NA	NA	NA	120446370	120444207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120444956_120445965
transcript_25134.known	chr12	-	1151	2	FSM	ENSG00000170855.4	ENST00000546954.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	0	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCCTCTGGAACTCA	9	True	NA	-16	True	AATAAA	-23	NA	120446384	120443963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120444956_120446225
transcript_25135.known	chr12	+	662	5	FSM	ENSG00000088986.11	ENST00000548342.5	662	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1348.1185036932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCATCCAAAAACAAGGA	26	True	NA	NA	False	NA	NA	NA	120469882	120498237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120470105_120488116_120488178_120488577_120488654_120496415_120496554_120498072
transcript_25136.known	chr12	+	814	3	FSM	ENSG00000088986.11	ENST00000392509.6	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	1533	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	-7	True	NA	13	True	AATAAA	-16	NA	120469849	120498493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120470105_120496415_120496554_120498072
transcript_25137.known	chr12	+	663	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	3122	junction_2	20.5	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	1	True	NA	13	True	AATAAA	-16	NA	120496112	120498493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120496217_120496415_120496554_120498072
transcript_25138.known	chr12	+	697	3	FSM	ENSG00000088986.11	ENST00000392508.2	697	3	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	1433	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTGTGTGAATTACAA	5	True	NA	11	True	AATAAA	-14	NA	120496090	120498491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120496217_120496401_120496554_120498072
transcript_2514.known	chr1	+	3825	14	FSM	ENSG00000054118.15	ENST00000648638.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	238.648264361676	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	-18	True	NA	20	True	AATAAA	-24	NA	36224432	36305357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_36224506_36225411_36225464_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795_36303832_36304473
transcript_25140.known	chr12	-	1214	2	FSM	ENSG00000248008.4	ENST00000668253.2	1218	2	0	4	0	-4	multi-exon	FALSE	canonical	3	59	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTCAGGTTCCTCAT	-39	True	NA	-3	True	ATTAAA	-18	NA	120495946	120491020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120492111_120495822
transcript_25141.known	chr12	+	719	2	FSM	ENSG00000088986.11	ENST00000549989.1	719	2	0	0	0	0	multi-exon	FALSE	canonical	3	3122	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCTGTACTAGTTTG	1	True	NA	-20	True	NA	NA	NA	120496112	120498350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120496554_120498072
transcript_25148.nic	chr12	-	1603	8	NIC	ENSG00000110871.15	novel	1506	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	148.572939552756	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	-6	True	NA	-4	True	AGTAAA	-17	NA	120529165	120503278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120526456_120526547_120528939
transcript_25149.known	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	TRUE	canonical	3	345	junction_3	17.4451521441727	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	1	True	NA	-4	True	AGTAAA	-17	NA	120529158	120503278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
transcript_25151.known	chr12	-	992	6	FSM	ENSG00000110871.15	ENST00000445328.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.468563179953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATTTGGTCTGTATCT	-2	True	NA	NA	False	NA	NA	NA	120529161	120503573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120522213_120522364_120528939
transcript_25153.known	chr12	-	794	5	FSM	ENSG00000167272.11	ENST00000543355.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	367.747450704964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTACCTAGCATTCCC	4	True	NA	-158	True	NA	NA	NA	120581381	120579153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120580995_120581258_120581342
transcript_25154.known	chr12	-	1086	5	FSM	ENSG00000167272.11	ENST00000357500.5	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	151.819588657064	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-17	True	NA	NA	False	NA	NA	NA	120581402	120578763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114_120581258_120581342
transcript_2516.nic	chr1	+	1367	5	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-56	16224	-45	-5036	5prime_fragment	FALSE	canonical	0	0	junction_4	236.631966352815	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAGAAAGGGAGCTTC	NA	False	NA	63	True	GATAAA	-8	NA	36224386	36289133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059
transcript_25160.known	chr12	-	913	4	FSM	ENSG00000167272.11	ENST00000341039.6	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	327.051813767924	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	6	True	NA	NA	False	NA	NA	NA	120581379	120578763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120581114_120581258_120581342
transcript_25164.known	chr12	-	718	2	FSM	ENSG00000167272.11	ENST00000539716.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTTAAATGCAGATAGA	-13	True	NA	NA	False	NA	NA	NA	120581398	120580595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120581258_120581342
transcript_25165.known	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_3	130.099961568019	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	49	False	NA	-52	True	AATAAA	-18	NA	120581336	120579047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
transcript_25166.known	chr12	-	496	2	FSM	ENSG00000256008.3	ENST00000544339.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGAGACCACAATC	100	False	NA	NA	False	ATTAAA	-25	NA	120640153	120630104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120630497_120640049
transcript_25167.known	chr12	+	6341	5	FSM	ENSG00000110917.8	ENST00000228506.8	6341	5	0	0	0	0	multi-exon	FALSE	canonical	3	1371	junction_4	43.6369969177532	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTGGGACTGAGTT	-3	True	NA	47	True	AATAAA	-16	NA	120687148	120701859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315
transcript_25169.known	chr12	+	4381	5	FSM	ENSG00000175970.11	ENST00000344651.5	4381	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	8.72854512504805	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCCCTCGTCCTGTCTC	5	True	NA	12	True	AATAAA	-19	NA	120710457	120723640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120710719_120713273_120713388_120716627_120716740_120716869_120717043_120719919
transcript_25170.known	chr12	+	1859	10	FSM	ENSG00000122971.9	ENST00000242592.9	1859	10	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_5	10.6458129484475	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	-14	True	NA	16	True	AATAAA	-16	NA	120725825	120740008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_120725932_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_25172.known	chr12	-	343	2	FSM	ENSG00000241388.5	ENST00000619441.1	343	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCGAGATATTTGTCAT	194	False	NA	NA	False	AATAAA	-16	NA	120980771	120941727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_120941943_120980643
transcript_25176.known	chr12	+	1084	12	FSM	ENSG00000135124.16	ENST00000542067.5	1084	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.0144590766156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTACCCCACACCTGG	0	True	NA	NA	False	NA	NA	NA	121210164	121233547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121222963_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_25179.known	chr12	+	1760	12	FSM	ENSG00000135124.16	ENST00000337233.9	1760	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	10.1655714534504	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	9	True	NA	16	True	ATTAAA	-16	NA	121210128	121234106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_2518.nnic	chr1	+	1226	4	NIC	ENSG00000054118.15	novel	4405	12	NA	NA	-7	-5036	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	265.918533890864	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAGAAAGGGAGCTTC	-26	True	NA	63	True	GATAAA	-8	NA	36224424	36289133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_36224506_36282532_36282701_36286367_36287271_36289059
transcript_25180.known	chr12	+	1612	11	FSM	ENSG00000135124.16	ENST00000543984.5	1612	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	27.4191538892067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	9	True	NA	16	True	ATTAAA	-16	NA	121210128	121234106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121210299_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_25183.nic	chr12	+	1381	8	NIC	ENSG00000135124.16	novel	1612	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	33.3240123022179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	-2	True	NA	16	True	ATTAAA	-16	NA	121210117	121234106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_121210299_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_25186.known	chr12	-	2006	16	FSM	ENSG00000110931.19	ENST00000412367.6	2006	16	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	23.6825298948871	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	1119	False	NA	19	True	TTTAAA	-20	NA	121296686	121240524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_25187.nnic	chr12	-	1499	15	NIC	ENSG00000110931.19	novel	2006	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_14	80.3442846855497	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	18	True	NA	19	True	TTTAAA	-20	NA	121296709	121240524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121296637
transcript_25194.known	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_8	182.965918530611	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	3	True	NA	-24	True	AATAAA	-15	NA	121352388	121308356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_25196.known	chr12	-	2574	17	FSM	ENSG00000089053.13	ENST00000261819.8	2574	17	0	0	0	0	multi-exon	TRUE	canonical	3	654	junction_8	106.571700482586	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	3	True	NA	88	True	AATAAA	-19	NA	121352411	121308244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_252.known	chr1	-	2260	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_5	57.3626378596925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-10	True	NA	-6	True	AAAAAG	-28	NA	1273854	1253911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
transcript_2520.nnic	chr1	+	1861	2	NIC	ENSG00000214193.11	novel	2387	6	NA	NA	816	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTGAAGTGCCCAG	766	False	NA	12	True	AATAAA	-13	NA	36321419	36329221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_36321779_36327719
transcript_2521.known	chr1	-	860	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTCTAAGTGTCTCCA	-5	True	NA	-30	True	ATTAAA	-15	NA	36397908	36393435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36394154_36397766
transcript_25212.known	chr12	-	1549	11	FSM	ENSG00000089094.20	ENST00000446152.6	1549	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	86.6784863734941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGGGCAGGAGTGGC	11	True	NA	NA	False	NA	NA	NA	121579644	121509571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_25214.nic	chr12	-	1497	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	105.257121984192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	-15	True	NA	28	True	NA	NA	NA	121579670	121516346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_25215.nic	chr12	-	1665	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	109.282960392271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	1	True	NA	28	True	NA	NA	NA	121580246	121516346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
transcript_25223.known	chr12	-	574	4	FSM	ENSG00000089094.20	ENST00000540191.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	103.701494685467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGTATCAGAGGGCG	2621	False	NA	NA	False	NA	NA	NA	121580140	121574364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121574594_121575780_121575860_121578801_121578947_121580019
transcript_2523.known	chr1	-	1455	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	8.24321644044063	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCATTTTATTCTTA	-18	True	NA	-8	True	AATATA	-20	NA	36450451	36417905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_25237.known	chr12	+	2051	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	190.189963516013	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTACATTGTCTTGG	-9	True	NA	15	True	AATAAA	-16	NA	121400118	121424348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_25241.known	chr12	+	2066	6	FSM	ENSG00000170633.17	ENST00000361234.10	1986	6	-77	-3	-42	-1	multi-exon	FALSE	canonical	3	413	junction_1	39.5959593898165	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATTGTCTTGGTCA	NA	False	NA	18	True	AATAAA	-19	NA	121400040	121424351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_25248.nic	chr12	+	1381	5	ISM	ENSG00000170633.17	ENST00000361234.10	1986	6	-57	3269	-22	2339	5prime_fragment	FALSE	canonical	3	413	junction_1	32.6907861636884	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATTTTCTCACTAATG	NA	False	NA	7	True	ATTAAA	-20	NA	121400060	121421079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576
transcript_2525.known	chr1	-	767	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	11.6913429510899	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-10	True	NA	NA	False	AATAAA	-21	NA	36450443	36428298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_25253.known	chr12	+	1449	5	FSM	ENSG00000170633.17	ENST00000613529.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	205.387438759044	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACATTGTCTTGGTCAG	-1	True	NA	19	True	AATAAA	-20	NA	121400082	121424352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121417860_121417912_121420241_121420335_121420576_121420779_121423385
transcript_25260.known	chr12	+	593	2	FSM	ENSG00000170633.17	ENST00000555076.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTATTTTTAACTTAA	19	True	NA	NA	False	NA	NA	NA	121400146	121423906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121423385
transcript_25261.known	chr12	+	1722	7	FSM	ENSG00000170633.17	ENST00000392464.3	1722	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	179.068345114993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTTCTTCAAACGGGG	16	True	NA	17	True	AATAAA	-18	NA	121400143	121430623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385_121423518_121430030
transcript_25262.nic	chr12	-	946	6	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	7.52063827078527	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-3	True	NA	-3	True	AATAAA	-19	NA	121802946	121795266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802630_121802785_121802878
transcript_25264.known	chr12	-	2435	5	FSM	ENSG00000139725.8	ENST00000267205.7	2435	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	23.1786539729985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTCCTTTCTGCATT	-7	True	NA	-5	True	AATAAA	-21	NA	121793688	121777753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121779663_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_25268.known	chr12	-	1024	5	FSM	ENSG00000212694.8	ENST00000428029.6	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	4.41588043316392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGCTCAGGGCCCGGC	9184	False	NA	NA	False	NA	NA	NA	121802933	121795639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630_121802785_121802878
transcript_25269.known	chr12	-	1485	4	FSM	ENSG00000139725.8	ENST00000537171.5	1485	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	7.58653778449403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCCTTCACGGGCCA	9670	False	NA	NA	False	NA	NA	NA	121794262	121780486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121781007_121781082_121781193_121793151_121793240_121793495
transcript_2527.known	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1469	junction_1	78.7253038697708	700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-18	True	NA	27	True	GGGGCT	-15	NA	36464384	36455717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
transcript_25270.known	chr12	-	875	4	FSM	ENSG00000212694.8	ENST00000541694.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	4.92160768674447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTGTGCAAGCTTGT	0	True	NA	NA	False	NA	NA	NA	121802943	121795892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630
transcript_25271.known	chr12	-	1220	4	FSM	ENSG00000212694.8	ENST00000542933.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	16.9771087709958	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	9207	False	NA	-3	True	AATAAA	-19	NA	121802910	121795266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802878
transcript_25273.known	chr12	-	1419	14	FSM	ENSG00000158104.11	ENST00000289004.8	1419	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.56136793309111	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTCTGTGTTTGTGT	-3	True	NA	NA	False	ATTAAA	-17	NA	121858859	121839526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_121839839_121839931_121840049_121843709_121843833_121846861_121846934_121847051_121847215_121848998_121849077_121849686_121849791_121854702_121854793_121856323_121856407_121856582_121856626_121857327_121857433_121857756_121857820_121858686_121858714_121858820
transcript_25274.nnic	chr12	+	669	3	Antisense	novelGene_ENSG00000158104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGCTGTATTTTCC	NA	False	NA	NA	False	AATAAA	-30	NA	121839743	121848268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr12_+_121840010_121847077_121847211_121847998
transcript_25282.known	chr12	+	2725	6	FSM	ENSG00000110801.14	ENST00000541212.6	2725	6	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_4	24.4997959175174	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGAGTTCATACTTCTC	-20	True	NA	NA	False	NA	NA	NA	121888789	121918297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121915855_121915945_121916283
transcript_25283.known	chr12	+	1001	6	FSM	ENSG00000110801.14	ENST00000543699.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	226.909144813513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACTGGTGTGATTATT	35	True	NA	9	True	NA	NA	NA	121888844	121916584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121888995_121894738_121894842_121899633_121899890_121903005_121903108_121915855_121915945_121916283
transcript_25284.known	chr12	+	492	2	FSM	ENSG00000158023.10	ENST00000545988.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGACATTCCACTGTTTC	29	False	NA	20	True	ATTAAA	-33	NA	122001703	122003927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122001920_122003651
transcript_25285.known	chr12	+	1195	7	FSM	ENSG00000110801.14	ENST00000537407.5	1195	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	270.300861181676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTCACCCCAGCTG	0	True	NA	24	True	AATAAA	-23	NA	121888731	121916644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121910941_121911007_121915855_121915945_121916283
transcript_25286.known	chr12	+	871	4	FSM	ENSG00000110987.9	ENST00000432926.2	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCACACACCTGTGATCC	-3	True	NA	NA	False	NA	NA	NA	122021977	122044371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885
transcript_25288.known	chr12	+	850	3	FSM	ENSG00000256546.3	ENST00000653475.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACTCAAAATAGATCATA	-5	True	NA	15	True	ATTAAA	-27	NA	122064276	122068568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122064683_122068027_122068192_122068288
transcript_25292.known	chr12	-	4559	13	FSM	ENSG00000139719.11	ENST00000267199.9	4559	13	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	56.8565446247542	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGTCTTGCTATA	-16	True	NA	-34	True	AATAAA	-17	NA	122266494	122229563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25308.known	chr12	-	1418	7	FSM	ENSG00000184047.20	ENST00000267169.11	1418	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	313.48546838552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATCAACAGGACTTAA	-5	True	NA	21	True	NA	NA	NA	122226039	122207793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122209772_122209859_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_25313.known	chr12	-	1471	6	FSM	ENSG00000184047.20	ENST00000464942.7	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_4	88.8022522236908	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTATGCAGCCTCCTTCC	-18	True	NA	81	True	NA	NA	NA	122226052	122207667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_25314.known	chr12	-	1336	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	275.314075194132	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCCTCTTGTTCCTTC	-18	True	NA	-25	True	NA	NA	NA	122226052	122207773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
transcript_25319.known	chr12	-	732	6	FSM	ENSG00000184047.20	ENST00000541656.6	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	255.713433358516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCCCGGAAAGCAGAA	-1	True	NA	NA	False	NA	NA	NA	122225973	122208505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225786
transcript_25320.known	chr12	-	1429	6	FSM	ENSG00000184047.20	ENST00000540535.6	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	284.280424932847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACCTGGTGCTCTCAAC	12	True	NA	-4	True	NA	NA	NA	122226022	122207818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225825
transcript_25325.known	chr12	-	1859	5	FSM	ENSG00000184047.20	ENST00000443649.9	1859	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	312.699036615081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCCTTCCTTGAG	928	False	NA	86	True	NA	NA	NA	122226568	122207662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122225964
transcript_25326.known	chr12	-	1338	5	FSM	ENSG00000184047.20	ENST00000353548.11	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	266.756911812984	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTATGCAGCCTCCTTC	-18	True	NA	80	True	NA	NA	NA	122226052	122207668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224511_122224645_122225964
transcript_25327.known	chr12	-	555	5	FSM	ENSG00000184047.20	ENST00000541273.6	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	301.96388442991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGAGGCCTACCTGCGT	-5	True	NA	NA	False	AAAACA	-32	NA	122226039	122208409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224644_122224749_122225964
transcript_25332.nic	chr12	-	855	5	ISM	ENSG00000139719.11	ENST00000542790.2	2573	6	-69	2724	-6	2042	5prime_fragment	FALSE	canonical	3	480	junction_2	38.3601355576333	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTACTCATGGTGCTTT	-22	True	NA	0	True	ATTAAA	-21	NA	122266500	122250819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25333.known	chr12	-	1173	5	FSM	ENSG00000139719.11	ENST00000451053.3	1173	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	236.059711725656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTATGTTTCAGGTA	16	True	NA	0	True	AATAAA	-20	NA	122266416	122252861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122253544_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_25337.known	chr12	+	2891	3	FSM	ENSG00000176383.9	ENST00000324189.5	2891	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	-10	True	NA	NA	False	AATAAA	-21	NA	122203708	122208952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122203802_122204521_122204685_122206317
transcript_25338.known	chr12	+	2749	2	FSM	ENSG00000176383.9	ENST00000546192.1	2749	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCATCACCTTGACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	122203680	122208945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122203802_122206317
transcript_25339.known	chr12	-	2569	5	FSM	ENSG00000184047.20	ENST00000644509.1	2569	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	245.734104267194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	1434	False	NA	-18	True	NA	NA	NA	122226062	122207766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644
transcript_25340.known	chr12	-	1523	7	FSM	ENSG00000184047.20	ENST00000644227.1	1523	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	328.462791736835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGAAAATGCGTCTC	1	True	NA	54	True	NA	NA	NA	122226033	122207694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122220529_122220628_122224511_122224645_122225964
transcript_25345.known	chr12	-	5229	24	FSM	ENSG00000130779.22	ENST00000537178.5	5229	24	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_9	30.1445164408981	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAGCATCTTGTGG	1049	False	122422670	NA	False	AAAAAG	-40	NA	122422632	122272042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122273101_122274037_122274163_122278153_122278204_122278791_122278943_122279027_122279146_122288488_122288542_122309761_122309883_122316748_122316856_122319231_122319349_122327946_122328163_122328260_122328427_122332986_122333144_122334026_122334111_122334647_122334706_122336631_122336749_122340752_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
transcript_25350.known	chr12	-	4255	14	FSM	ENSG00000033030.15	ENST00000672018.1	4255	14	0	0	0	0	multi-exon	TRUE	non_canonical	3	70	junction_8	14.8539238336016	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATAGTGTTTTTAACC	NA	False	NA	-3	True	AATAAA	-19	NA	122501073	122471598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_25352.nic	chr12	-	2727	12	NIC	ENSG00000033030.15	novel	4255	14	NA	NA	64	0	combination_of_known_junctions	FALSE	non_canonical	3	17	junction_7	27.5095775958871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGACTTTGAATACAAA	NA	False	NA	-5	True	AATAAA	-20	NA	122501009	122472892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_25369.known	chr12	-	1956	11	FSM	ENSG00000111011.18	ENST00000433877.6	1956	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	237.886527571445	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	18	True	NA	-40	True	AATAAA	-13	NA	122526936	122505058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_25373.known	chr12	-	2001	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	238.828725240495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-6	False	NA	-40	True	AATAAA	-13	NA	122527000	122505058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_25388.known	chr12	-	3461	10	FSM	ENSG00000111011.18	ENST00000331738.12	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_3	106.304593817326	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCCAAGTGATCTTC	18	True	NA	NA	False	AATAAA	-18	NA	122526936	122503453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_25389.nic	chr12	-	2300	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-44	333	combination_of_known_junctions	FALSE	canonical	3	330	junction_3	112.648365815877	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCATGCTTTTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	122527044	122504725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_25398.nic	chr12	-	1967	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_3	112.648365815877	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	NA	False	NA	-40	True	AATAAA	-13	NA	122527044	122505058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_2541.nnic	chr1	-	850	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	0	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTAGTGAGAATCTT	NA	False	NA	-20	True	AATAAA	-21	NA	36770262	36768121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_36768612_36769902
transcript_25419.known	chr12	-	1146	9	FSM	ENSG00000111011.18	ENST00000525335.6	1146	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	307.245601066964	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGCTTTGGCAGGGC	5	True	NA	NA	False	AATGAA	-24	NA	122526949	122508249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122508448_122511108_122511189_122514711_122514729_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522330_122526847
transcript_2542.nnic	chr1	-	753	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-537	-97	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	0	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGATTTTCCCCTTTT	NA	False	NA	-16	True	AATAAA	-25	NA	36770262	36768218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_36768612_36769902
transcript_25420.known	chr12	-	1041	8	FSM	ENSG00000111011.18	ENST00000527399.3	1041	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	298.008354902739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	-1	True	NA	37	True	AAGAAA	-8	NA	122526995	122511110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122511189_122515104_122515228_122517230_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_25422.nic	chr12	+	2542	8	NIC	ENSG00000184445.12	novel	6974	64	NA	NA	-28	18286	combination_of_known_junctions	FALSE	canonical	3	95	junction_7	9.55328771274314	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAATAACCATGAATTCC	20	False	NA	NA	False	ATTAAA	-14	NA	122527217	122545966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122527352_122530021_122530193_122534663_122534785_122538338_122538455_122539675_122539755_122542049_122542128_122543599_122543635_122544158
transcript_2543.known	chr1	-	1395	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	21	3	1	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTATTTTTCTCTGCTA	-20	True	NA	-2	True	AATAAA	-17	NA	37474411	37454878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37455913_37456366_37456460_37474143
transcript_25430.known	chr12	+	2719	8	FSM	ENSG00000139726.11	ENST00000280557.11	2719	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	516.092935785162	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	-14	True	NA	17	True	ATTAAA	-18	NA	122752823	122771064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033
transcript_2544.known	chr1	+	2654	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.91160935469109	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATTGTCTTTGTTAT	0	True	NA	34	True	AATAAA	-26	NA	37474579	37484377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
transcript_25440.known	chr12	+	699	2	FSM	ENSG00000139726.11	ENST00000537955.1	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	1559	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGAGTGTTGGGTGG	9	True	NA	NA	False	NA	NA	NA	122752846	122754287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122752951_122753692
transcript_25442.known	chr12	+	671	4	FSM	ENSG00000139726.11	ENST00000539463.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	642.763305320603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCAGGCACCTG	-11	True	NA	NA	False	ACTAAA	-17	NA	122752826	122763256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844
transcript_25443.known	chr12	+	4509	32	FSM	ENSG00000130787.14	ENST00000253083.9	4509	32	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	17.4586772417093	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCCAGAGGGAGGG	-13	True	NA	6	True	AATAAA	-25	NA	122835456	122862961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020_122857216_122858101_122858250_122858348_122858436_122858837_122858946_122859060_122859198_122859425_122859537_122859771_122859831_122860046_122860078_122860147_122860211_122860422_122860524_122860678_122860785_122860915_122861040_122861130_122861193_122861307_122861515_122861705
transcript_25446.known	chr12	-	2706	4	FSM	ENSG00000139722.7	ENST00000267202.7	2706	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	14.613540144522	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTGTCACTTATTTAC	-20	True	NA	-2	True	AATAAA	-18	NA	122896124	122865329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_122867608_122868479_122868563_122870889_122871062_122895951
transcript_25449.known	chr12	+	1568	8	FSM	ENSG00000111325.16	ENST00000545056.5	1568	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	68.3890431610927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGGACGATGAGGG	7	True	NA	NA	False	NA	NA	NA	122974747	122979265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976600_122976768_122976870_122976971_122977980_122978200_122978359_122978570_122978752_122979011_122979082
transcript_2545.known	chr1	-	1351	9	FSM	ENSG00000163875.16	ENST00000487788.5	1351	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	179.818267634298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAATGGAAAAACATAA	30	False	NA	-112	True	NA	NA	NA	37514732	37493397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_25452.known	chr12	+	1828	8	FSM	ENSG00000111325.16	ENST00000540324.5	1828	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	67.7652008702077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCCTTTGTGTTTGCGGC	24	True	NA	12	True	TATAAA	-12	NA	122975251	122980040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975384_122975810_122975868_122976600_122976768_122976870_122976964_122978324_122978360_122978441_122978570_122978752_122979011_122979082
transcript_25457.known	chr12	+	1481	7	FSM	ENSG00000111325.16	ENST00000545317.5	1481	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	68.9822843602294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	76	False	NA	19	True	AATAAA	-20	NA	122974816	122979438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976600_122976768_122976870_122976964_122978324_122978570_122978752_122979011_122979082
transcript_25459.nic	chr12	+	1503	7	NIC	ENSG00000111325.16	novel	1465	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	60.3639425116978	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	8291	False	NA	19	True	AATAAA	-20	NA	122974684	122979438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122975122_122975810_122975868_122976600_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25461.known	chr12	+	1465	7	FSM	ENSG00000111325.16	ENST00000545612.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	55.4166040099896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	11	True	NA	19	True	AATAAA	-20	NA	122974751	122979438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
transcript_25463.known	chr12	+	1488	7	FSM	ENSG00000111325.16	ENST00000454694.6	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	45.0582955736233	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	230	False	NA	NA	False	NA	NA	NA	122974970	122979762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25468.nic	chr12	+	1282	7	NIC	ENSG00000111325.16	novel	1780	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	46.1001325618726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	456	False	NA	19	True	AATAAA	-20	NA	122975196	122979438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
transcript_2547.known	chr1	-	1408	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	151.013176881479	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATTTCACAGGCTT	6	True	NA	-49	True	TTTAAA	-37	NA	37514756	37493334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_25471.known	chr12	+	1780	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	28.9678941051794	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	-8	True	NA	13	True	TATAAA	-13	NA	122975219	122980041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25475.known	chr12	+	996	6	FSM	ENSG00000111325.16	ENST00000542117.5	996	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	49.3582819798258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGAGTGTGTGACCC	37	False	NA	NA	False	NA	NA	NA	122974777	122979005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752
transcript_25477.known	chr12	+	1956	6	FSM	ENSG00000111325.16	ENST00000536150.5	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	53.443802259944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTTGCGGCTGT	-14	True	NA	15	True	TATAAA	-15	NA	122974726	122980043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122975122_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_2548.known	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	178.552913325834	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-1	True	NA	-5	True	AATAAA	-18	NA	37514763	37492574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_25481.nic	chr12	+	1121	6	NIC	ENSG00000111325.16	novel	1780	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	55.8820185748511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	-9	True	NA	19	True	AATAAA	-20	NA	122975218	122979438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122975384_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_25483.nic	chr12	+	1070	6	NIC	ENSG00000182196.14	novel	910	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	756.269422891075	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-23	True	NA	17	True	ATTAAA	-17	NA	122980240	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122980386_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25485.known	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	640.329727562293	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	-1	True	NA	-97	True	NA	NA	NA	122980262	122982795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25486.nic	chr12	+	1213	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	733.37984700972	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4903	False	NA	17	True	ATTAAA	-17	NA	122980130	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122980386_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25488.nic	chr12	+	1189	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	651.265045891456	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4903	False	NA	17	True	ATTAAA	-17	NA	122980130	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25491.nnic	chr12	+	1057	6	NNC	ENSG00000182196.14	novel	1491	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	661.508760335039	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4987	False	NA	17	True	ATTAAA	-17	NA	122980214	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_122980338_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25493.known	chr12	+	1591	6	FSM	ENSG00000182196.14	ENST00000543566.6	1591	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	422.956924520689	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTGTGGCTTTTTGT	4832	False	NA	21	True	ATTAAA	-21	NA	122980059	122982913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25494.known	chr12	+	1023	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	581.252096770412	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-19	True	NA	17	True	ATTAAA	-17	NA	122980680	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25495.nnic	chr12	+	838	6	NNC	ENSG00000182196.14	novel	1491	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	619.955482272719	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	2	True	NA	17	True	ATTAAA	-17	NA	122980701	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_122980746_122981128_122981300_122981594_122981810_122982026_122982075_122982468_122982539_122982619
transcript_25496.known	chr12	+	1491	6	FSM	ENSG00000182196.14	ENST00000453766.7	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	444.630813147267	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4961	False	NA	17	True	ATTAAA	-17	NA	122980188	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_25499.nic	chr12	+	995	6	NIC	ENSG00000182196.14	novel	1273	5	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	650.230543730453	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	52	False	NA	17	True	ATTAAA	-17	NA	122980893	122982909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_122980988_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_255.known	chr1	-	2004	18	FSM	ENSG00000127054.22	ENST00000527098.5	2004	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	147.729904107036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTGGACAGACCCTGG	-9	True	NA	NA	False	NA	NA	NA	1324666	1311822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1323180_1323288_1324580
transcript_25503.known	chr12	+	1339	5	FSM	ENSG00000182196.14	ENST00000392435.7	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	438.149161245346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCCAGCCTGGGCAGGT	4963	False	NA	NA	False	NA	NA	NA	122980190	122982711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468
transcript_25505.known	chr12	-	6369	24	FSM	ENSG00000051825.15	ENST00000606320.6	6369	24	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_15	14.4842003745976	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAGCAAATCTGCCACC	-17	True	NA	NA	False	AAAAAG	-17	NA	123233141	123154214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
transcript_2551.known	chr1	-	4702	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_4	32.5955859315678	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCTGATAATTGTTT	-4	True	NA	NA	False	AATAAA	-15	NA	37514766	37489992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_25513.nnic	chr12	-	1254	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	737	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	1180.6860529182	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	1835	False	NA	-33	True	AATAAA	-19	NA	123270404	123261002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123270176
transcript_25514.known	chr12	-	1281	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	1140.62682572152	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	1098	False	NA	-33	True	AATAAA	-19	NA	123271141	123261002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
transcript_25515.nnic	chr12	-	1093	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	-310	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	1194.82476632443	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	788	False	NA	-33	True	AATAAA	-19	NA	123271451	123261002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123271384
transcript_25516.known	chr12	-	931	4	FSM	ENSG00000111328.7	ENST00000544658.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	1178.80089733405	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTAACTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	123272334	123261275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123272156
transcript_25518.nnic	chr12	+	1896	3	NNC	ENSG00000130921.9	novel	1326	2	NA	NA	-471	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	57	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAGTCAATTTTTAT	-1	True	NA	6	True	AATAAA	-14	NA	123232913	123257929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_123233383_123253646_123253957_123256812
transcript_25519.known	chr12	+	1554	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	18.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGTCAAACATTAAT	-25	True	NA	37	True	AATAAA	-45	NA	123233435	123257960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123233532_123253646_123253957_123256812
transcript_25521.known	chr12	+	2234	3	FSM	ENSG00000130921.9	ENST00000680325.1	2234	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTATGTTTTGTAATAA	-25	True	NA	-31	True	NA	NA	NA	123233435	123257892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123233532_123253646_123254705_123256812
transcript_25522.known	chr12	+	2648	3	FSM	ENSG00000130921.9	ENST00000425637.3	2648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGTAAAGTCAATTTT	0	True	NA	3	True	AATAAA	-11	NA	123233384	123257926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123233532_123253646_123255034_123256812
transcript_25523.known	chr12	+	1682	4	FSM	ENSG00000130921.9	ENST00000536130.2	1682	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	52.6392333615231	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAGTCAATTTTTAT	1	True	NA	6	True	AATAAA	-14	NA	123233461	123257929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123233532_123233739_123233925_123253646_123253957_123256812
transcript_25524.nic	chr12	-	3584	26	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-28	20627	-24	-20627	5prime_fragment	FALSE	canonical	3	30	junction_23	9.00364370685558	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGATATGATATGGGAA	340	False	NA	16	True	NA	NA	NA	123364871	123309735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_123309857_123311054_123311130_123313619_123313720_123315372_123315445_123315547_123315661_123317220_123317357_123319899_123320032_123320431_123320608_123320698_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_25532.nic	chr12	-	2540	18	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-28	31709	-24	-31709	5prime_fragment	FALSE	canonical	3	30	junction_15	8.87124353953358	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGTATAGATCCAG	340	False	NA	NA	False	AAGAAA	-18	NA	123364871	123320817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_25534.nic	chr12	-	2543	18	ISM	ENSG00000139697.14	ENST00000602398.3	11128	32	-24	31709	-24	-31709	5prime_fragment	FALSE	canonical	3	29	junction_15	9.0213127118498	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGTATAGATCCAG	340	False	NA	NA	False	AAGAAA	-18	NA	123364871	123320817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
transcript_25536.nnic	chr12	-	2438	17	NIC	ENSG00000139697.14	novel	11128	32	NA	NA	-24	-31709	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	14.7219012019508	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGTATAGATCCAG	340	False	NA	NA	False	AAGAAA	-18	NA	123364871	123320817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123350309_123350442_123364700
transcript_2554.known	chr1	-	603	6	FSM	ENSG00000163875.16	ENST00000373073.8	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	152.563953802987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAATGTTCTCTGGTTT	-1	True	NA	30	True	NA	NA	NA	37514763	37493761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37493815_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_25545.known	chr12	+	752	2	FSM	ENSG00000256092.3	ENST00000543072.2	783	2	31	0	5	0	multi-exon	FALSE	canonical	3	14	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCTCACACACATAGAA	-2	True	NA	NA	False	TTTAAA	-41	NA	123364952	123366113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123365116_123365524
transcript_25546.known	chr12	+	1774	7	FSM	ENSG00000183955.14	ENST00000437519.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	50.4691875196034	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACAGAAAACAACT	13	True	NA	NA	False	AATAAA	-24	NA	123384165	123408507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123384209_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_25548.known	chr12	-	1752	4	FSM	ENSG00000150977.11	ENST00000280571.10	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.24721912892465	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCGCCTGCTCTGTG	-6	True	NA	NA	False	AGTAAA	-19	NA	123436684	123415038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123415922_123423043_123423158_123430507_123430660_123436081
transcript_25549.nnic	chr12	-	1099	3	NIC	ENSG00000150977.11	novel	1752	4	NA	NA	151	-350	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	26	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTATCTAGAGTGGT	214	False	NA	-8	True	ATTAAA	-23	NA	123436533	123415388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_-_123415922_123423043_123423158_123436081
transcript_25550.known	chr12	-	3933	7	FSM	ENSG00000188026.13	ENST00000376874.9	3933	7	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_2	14.135259302735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTACATGTGTGTA	-1	True	NA	-8	True	AATAAA	-20	NA	123533719	123470053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123472683_123484179_123484273_123485632_123485806_123498543_123498766_123499417_123499537_123523494_123523646_123533173
transcript_25555.known	chr12	+	1477	2	FSM	ENSG00000184209.15	ENST00000526639.3	1477	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCATTTGTAAGGAGC	-12	True	NA	NA	False	NA	NA	NA	123458138	123466936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123458217_123465537
transcript_25556.known	chr12	-	239	1	FSM	ENSG00000274427.1	ENST00000610631.1	239	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTACTTGTCCTTTTTT	4734	False	NA	-3	True	AATAAA	-14	NA	123515513	123515274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123515300_123515500
transcript_25558.known	chr12	+	603	4	FSM	ENSG00000086598.11	ENST00000438031.2	603	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1998.75516815397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAAGTGAATGCCGTCA	-9	True	NA	NA	False	AATACA	-28	NA	123584532	123590446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123584817_123586746_123586940_123587610_123587632_123590341
transcript_25559.known	chr12	+	2544	4	FSM	ENSG00000086598.11	ENST00000262225.8	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	3706	junction_2	261.929167694033	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGTAATGTCTCGAT	10	True	NA	10	True	AATAAA	-20	NA	123584551	123598582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123584817_123586746_123586940_123590341_123590450_123596604
transcript_25563.known	chr12	+	433	2	FSM	ENSG00000086598.11	ENST00000544188.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACATCACATTCCAAGAG	30	False	NA	NA	False	NA	NA	NA	123584597	123586960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123584817_123586746
transcript_25566.known	chr12	+	2656	14	FSM	ENSG00000111364.16	ENST00000238146.9	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_11	28.348423873201	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	-21	True	NA	27	True	AATAAA	-21	NA	123602098	123620943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431_123619725_123619963
transcript_25600.known	chr12	+	3327	13	FSM	ENSG00000111358.14	ENST00000543341.7	3327	13	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_2	9.64473085852235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGAATTATTTCC	-4	True	NA	14	True	AATAAA	-16	NA	123633828	123662604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_25612.known	chr12	+	1472	12	FSM	ENSG00000111358.14	ENST00000228955.11	1472	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	27.1938252592644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATGAGTAAGGAGAA	-4	True	NA	115	True	NA	NA	NA	123633828	123660829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123633873_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_2562.known	chr1	-	4554	4	FSM	ENSG00000163877.11	ENST00000296215.8	4554	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	9.28559218478941	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-3	True	NA	0	True	ATTAAA	-22	NA	37554293	37534448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37538013_37540156_37540756_37552644_37552748_37554005
transcript_25630.known	chr12	-	2397	9	FSM	ENSG00000111361.13	ENST00000424014.7	2397	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	234.737619481838	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGATCCTCCTGCCT	-19	True	NA	NA	False	NA	NA	NA	123633686	123620405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_2564.known	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	38.8766710966301	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	3	True	NA	-39	True	ATTAAA	-18	NA	37595937	37566815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_25640.known	chr12	+	2767	11	FSM	ENSG00000111364.16	ENST00000542286.5	2767	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_10	75.3562207120288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAGGTAAAGTTTACT	4213	False	NA	NA	False	AAAAAG	-34	NA	123602076	123619716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619447
transcript_25641.known	chr12	+	2513	18	FSM	ENSG00000168778.13	ENST00000426174.6	2513	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	8.36329101958079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-11	True	NA	NA	False	NA	NA	NA	123671112	123708007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673617_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_25643.known	chr12	+	2374	17	FSM	ENSG00000168778.13	ENST00000680574.1	2374	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	9.08896996364274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCGGCCTTTTTTTTTT	-14	True	NA	NA	False	NA	NA	NA	123671109	123707997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673614_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_25644.known	chr12	+	4262	5	FSM	ENSG00000179195.16	ENST00000392404.7	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	6.65206734782504	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	-29	True	NA	16	True	AATAAA	-17	NA	123973211	124015426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973304_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_25645.known	chr12	+	4312	5	FSM	ENSG00000179195.16	ENST00000337815.9	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	9.63068014212911	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTTGACATGTAGT	-26	True	NA	17	True	AATAAA	-18	NA	123973214	124015427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973353_123973885_123974021_123988042_123988139_124011380_124011442_124011545
transcript_25646.known	chr12	+	4321	5	FSM	ENSG00000179195.16	ENST00000538932.6	4321	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	11.1214882097676	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTTGTGTGAATTCA	-26	True	NA	29	True	AATAAA	-30	NA	123973214	124015439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973353_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_25647.known	chr12	+	455	4	FSM	ENSG00000179195.16	ENST00000543017.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.7194104181711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTACTCTACAAGAGGAA	32	True	NA	NA	False	NA	NA	NA	123973272	124011773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973304_123973885_123974021_124011380_124011442_124011545
transcript_25648.known	chr12	+	753	2	FSM	ENSG00000179195.16	ENST00000540009.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	-22	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_123973304_123973885
transcript_25650.known	chr12	-	624	2	FSM	ENSG00000150991.16	ENST00000536661.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTCCACCCTGCACC	5	True	NA	NA	False	AAAACA	-40	NA	124915031	124913586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124913766_124914586
transcript_25651.known	chr12	-	3745	1	FSM	ENSG00000150991.16	ENST00000536769.1	3745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTGAAGGGGGTCA	4768	False	NA	38	True	NA	NA	NA	124915348	124911603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124911600_124915300
transcript_25652.known	chr12	-	2193	2	FSM	ENSG00000150991.16	ENST00000339647.6	2193	2	0	0	0	0	multi-exon	FALSE	canonical	3	1903	junction_1	0	2892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTTTTTTTTTTTTTT	-1	True	NA	-4	True	AATAAA	-17	NA	124914650	124911645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_124913775_124914586
transcript_25657.known	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9996	junction_1	1089.01270271134	6226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	-5	True	NA	35	True	AATATA	-21	NA	130872065	130877678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_25663.known	chr12	+	1475	6	FSM	ENSG00000132341.12	ENST00000541630.5	1475	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6213.35318809417	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATTCTTGCTGTTAAAA	-5	True	NA	114	True	NA	NA	NA	130872065	130876733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_130872127_130872835_130872913_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_25665.known	chr12	+	762	5	FSM	ENSG00000132341.12	ENST00000477395.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	9996	junction_1	1257.88880669159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTAGGAAGCTCATTGG	-1	True	NA	NA	False	NA	NA	NA	130872069	130875665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_130872127_130872583_130872921_130873002_130873129_130874545_130874734_130875611
transcript_25667.known	chr12	+	3246	18	FSM	ENSG00000061936.10	ENST00000261674.9	3246	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	31.3726348038043	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	2	True	NA	17	True	AATAAA	-29	NA	131711089	131799738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
transcript_25669.known	chr12	+	1650	15	FSM	ENSG00000184967.7	ENST00000330579.6	1650	15	0	0	0	0	multi-exon	TRUE	canonical	3	355	junction_5	35.6974960535021	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	6	True	NA	39	True	AATAAA	-14	NA	132144456	132152468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148608_132148660_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
transcript_25672.known	chr12	-	1484	2	FSM	ENSG00000256576.3	ENST00000538731.3	1517	2	33	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCGGCTGGTATTTCC	13	True	NA	2	True	ATTAAA	-28	NA	132189695	132186734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132187702_132189178
transcript_25674.known	chr12	+	1793	1	FSM	ENSG00000277011.1	ENST00000613430.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGATGTGGCTGAGGTG	30	False	NA	NA	False	AATAAA	-15	NA	132282813	132284606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132282800_132284600
transcript_25675.known	chr12	-	7823	49	FSM	ENSG00000177084.18	ENST00000320574.10	7823	49	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	50.648691301509	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTTGTCACTGTGTAT	11	True	NA	NA	False	NA	NA	NA	132687342	132623761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132624811_132624904_132624995_132625644_132625771_132626116_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641646_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968_132661165_132661526_132661685_132664003_132664149_132664369_132664463_132665301_132665451_132667502_132667649_132668355_132668503_132668634_132668738_132668810_132668940_132672214_132672323_132672626_132672840_132673163_132673278_132673574_132673708_132675397_132675518_132675734_132675821_132676093_132676205_132676545_132676654_132677362_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
transcript_25676.known	chr12	+	970	5	FSM	ENSG00000176894.10	ENST00000317479.8	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	21.3834047803431	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	-34	True	NA	20	True	AATAAA	-21	NA	132687586	132704985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132687793_132690262_132690377_132695883_132696047_132701249_132701370_132704618
transcript_25679.known	chr12	-	11228	18	FSM	ENSG00000072609.18	ENST00000450056.7	11228	18	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_13	68.0782675971645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTACACCTTAGGATAG	-5	True	NA	52	True	ATTAAA	-21	NA	132887605	132832355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_2568.nic	chr1	-	2078	14	ISM	ENSG00000134697.13	ENST00000373062.8	2350	16	-52	1499	-52	-1494	5prime_fragment	FALSE	canonical	3	652	junction_7	38.1304208484884	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAAGAAAAACACTGGA	NA	False	NA	-40	True	NA	NA	NA	37595989	37568314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_25681.known	chr12	-	2648	18	FSM	ENSG00000072609.18	ENST00000432561.6	2648	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_13	86.694867206773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGTATGGTATTT	-8	True	NA	-82	True	AATATA	-27	NA	132887608	132840974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_25688.known	chr12	-	2990	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_12	90.6091974728099	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-3	True	NA	-14	True	AATAAA	-20	NA	132887603	132840351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_25689.nic	chr12	-	1132	4	FSM	ENSG00000090615.16	ENST00000685580.1	1125	4	-7	0	-4	0	multi-exon	FALSE	canonical	3	10	junction_3	6.12825877028341	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAATGCTTTATTACT	-17	True	NA	2	True	AATAAA	-20	NA	132828873	132812947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_132813420_132816539_132816813_132821995_132822312_132828802
transcript_25693.known	chr12	+	555	2	FSM	ENSG00000236617.2	ENST00000424075.2	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGAGTCTCTCAACG	NA	False	NA	NA	False	AATAAA	-26	NA	132887841	132888583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_132887933_132888119
transcript_25694.nnic	chr12	-	1267	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	0	2678	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	1.24721912892465	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	-11	True	NA	-14	True	NA	NA	NA	132956306	132942119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132956242
transcript_25696.nnic	chr12	-	1372	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	209	2678	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	242	False	NA	-14	True	NA	NA	NA	132956053	132942119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132955761
transcript_25697.nnic	chr12	-	1157	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-13	2678	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	7	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	NA	False	NA	-14	True	NA	NA	NA	132956319	132942119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_25699.nnic	chr12	-	1075	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-13	2596	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	7	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	NA	False	NA	-27	True	AATAAA	-25	NA	132956319	132942201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_25703.nnic	chr12	+	3274	6	NNC	ENSG00000198040.11	novel	6811	5	NA	NA	8	-4	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_1	103.163171723246	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTCTTAGTGGTATTT	-17	True	NA	16	True	AATAAA	-21	NA	133037486	133059602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr12_+_133037546_133038874_133039013_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_25705.known	chr12	+	6811	5	FSM	ENSG00000198040.11	ENST00000539354.6	6811	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	58.1592640943814	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	5	True	NA	14	True	AATAAA	-18	NA	133037508	133063299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_25707.known	chr12	+	637	3	FSM	ENSG00000198040.11	ENST00000539686.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	115.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCACATCTTATACCA	21	True	NA	NA	False	NA	NA	NA	133037524	133048356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133037555_133041277_133041483_133047954
transcript_2571.known	chr1	+	2628	6	FSM	ENSG00000163879.11	ENST00000652629.1	2628	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	14.4858551697855	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTCTGAATTTTT	-2	True	NA	20	True	AATAAA	-17	NA	37556939	37566857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37557076_37557602_37557749_37559326_37559497_37561556_37561736_37562080_37562246_37565025
transcript_25711.known	chr12	+	2328	6	FSM	ENSG00000196387.10	ENST00000536790.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	41.5133713398466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	93	False	NA	66	True	AATAAA	-20	NA	133081010	133107428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_25716.known	chr12	+	2349	5	FSM	ENSG00000196387.10	ENST00000355557.7	2349	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	36.1481327318577	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	5	True	NA	66	True	AATAAA	-20	NA	133080922	133107428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_25718.nnic	chr12	+	2332	5	NIC	ENSG00000196387.10	novel	726	6	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	60.1389017192699	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	-18	True	NA	66	True	AATAAA	-20	NA	133080418	133107428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_133080552_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_25719.nic	chr12	+	2414	5	NIC	ENSG00000196387.10	novel	2328	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	47.5263085038171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	431	False	NA	66	True	AATAAA	-20	NA	133080867	133107428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_133081073_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_25720.known	chr12	+	553	4	FSM	ENSG00000196387.10	ENST00000412146.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	53.6739125543209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAGGATCATACTGAG	438	False	NA	NA	False	TTTAAA	-11	NA	133080874	133105641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133081073_133083102_133083230_133083465_133083562_133105509
transcript_25724.known	chr12	-	17294	2	FSM	ENSG00000214029.6	ENST00000537226.3	17294	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGACAAATATAAGC	-10	True	NA	-4	True	AATAAA	-17	NA	133130274	133104778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_-_133122025_133130226
transcript_25729.known	chr12	+	3773	7	FSM	ENSG00000090612.22	ENST00000541009.6	3773	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	19.238993967692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGTTATTATATCTT	18	False	NA	68	True	NA	NA	NA	133181558	133205173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_25733.nic	chr12	+	2143	6	NIC	ENSG00000256223.6	novel	2169	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	24	junction_1	9.15204895091804	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	5105	False	NA	-16	True	NA	NA	NA	133130570	133156968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_25734.known	chr12	+	717	6	FSM	ENSG00000090612.22	ENST00000500625.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	47.5167338944924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAATGCACTACATTTG	-5	True	NA	NA	False	AATAAA	-27	NA	133181502	133202219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133181628_133181945_133182031_133187864_133188073_133191488_133191616_133191907_133192004_133202143
transcript_25735.known	chr12	+	13390	6	FSM	ENSG00000090612.22	ENST00000536435.7	13390	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	25.7402408691139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCACCAGGGTCAGCC	-13	True	NA	NA	False	AATAAA	-19	NA	133181494	133214832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133202143
transcript_25738.known	chr12	+	2169	5	FSM	ENSG00000256223.6	ENST00000426665.6	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	7.3143694191639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	-8	True	NA	-16	True	NA	NA	NA	133130626	133156968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_25740.known	chr12	+	3236	3	FSM	ENSG00000090612.22	ENST00000536899.6	3236	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	50.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACCTTAGAAGCTTCAT	6	True	NA	16	True	AATAAA	-19	NA	133181513	133205121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr12_+_133181687_133181945_133182031_133202143
transcript_25742.known	chr13	+	4239	14	FSM	ENSG00000196199.14	ENST00000361479.10	4239	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	18.4493549541672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCCTTTTATATC	-13	True	NA	13	True	AATAAA	-14	NA	19633658	19673441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
transcript_25746.nic	chr13	+	1491	5	ISM	ENSG00000196199.14	ENST00000361479.10	4239	14	-25	23381	-25	-352	5prime_fragment	FALSE	canonical	3	76	junction_4	27.3587280406089	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTTTCTGAGAATAATC	NA	False	NA	NA	False	AAGAAA	-5	NA	19633633	19650060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002
transcript_25749.nic	chr13	+	567	3	ISM	ENSG00000196199.14	ENST00000361479.10	4239	14	-25	26916	-25	-3887	5prime_fragment	FALSE	canonical	3	139	junction_2	1	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAGAAAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	19633633	19646525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19633962_19642114_19642271_19646442
transcript_25750.nic	chr13	+	781	3	ISM	ENSG00000196199.14	ENST00000361479.10	4239	14	-25	26702	-25	-3673	5prime_fragment	FALSE	canonical	3	139	junction_2	1	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAAAAGAATTAAAGAA	NA	False	NA	NA	False	AGTAAA	-2	NA	19633633	19646739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19633962_19642114_19642271_19646442
transcript_25751.nic	chr13	+	883	3	ISM	ENSG00000196199.14	ENST00000361479.10	4239	14	-25	26600	-25	-3571	5prime_fragment	FALSE	canonical	3	139	junction_2	1	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCGAATCCCAGGTGGA	NA	False	NA	-89	True	AATAGA	-19	NA	19633633	19646841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19633962_19642114_19642271_19646442
transcript_25752.known	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	25.5494718184952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-2	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_25757.known	chr13	-	1382	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	22.7367543857957	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-3	True	NA	-11	True	AATAAA	-17	NA	19863524	19837464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_25764.known	chr13	-	1092	5	FSM	ENSG00000132950.19	ENST00000382907.8	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	30.2985148150862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTTCTATGGAATTG	139	False	NA	1	True	AATAAA	-29	NA	19863508	19837452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19837822_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_25767.known	chr13	-	1622	5	FSM	ENSG00000132950.19	ENST00000467542.5	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	25.3118055460293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-3	True	NA	-11	True	AATAAA	-17	NA	19863524	19837464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_19837822_19838699_19838986_19851354_19852191_19862398_19862467_19863449
transcript_25772.nic	chr13	-	1226	3	ISM	ENSG00000132950.19	ENST00000467542.5	1622	5	-166	13809	-41	-13809	5prime_fragment	FALSE	canonical	3	89	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACATTCTGTGGCTTTGC	NA	False	NA	NA	False	AGTAAA	-45	NA	19863690	19851273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_19852191_19862398_19862467_19863449
transcript_25774.known	chr13	+	7429	25	FSM	ENSG00000121741.17	ENST00000610343.5	7429	25	0	0	0	0	multi-exon	FALSE	canonical	2	270	junction_10	73.199771838594	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	-4	True	NA	NA	False	AATAAA	-16	NA	19958726	20089115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_2578.known	chr1	-	539	2	FSM	ENSG00000134697.13	ENST00000488496.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAATATGGCCAGATA	5	True	NA	NA	False	ATTAAA	-6	NA	37595935	37593484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37593847_37595758
transcript_25781.nic	chr13	+	1952	9	NIC	ENSG00000121741.17	novel	1912	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_2	99.2005544339345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	-1	True	NA	NA	False	TATAAA	-42	NA	19958683	20019963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_25785.known	chr13	+	1912	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	47.646658661785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	-8	True	NA	NA	False	TATAAA	-42	NA	19958676	20019963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_25787.nnic	chr13	+	1927	8	NNC	ENSG00000121741.17	novel	7429	25	NA	NA	7	2822	intron_retention	FALSE	canonical	2	2	junction_7	109.902368547019	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTGTTTGAGTTTTAT	-1	True	NA	NA	False	AATAAA	-14	NA	19958683	20022785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20022679
transcript_25789.nic	chr13	+	2166	7	ISM	ENSG00000121741.17	ENST00000610343.5	7429	25	-43	69152	7	0	5prime_fragment	FALSE	canonical	3	280	junction_4	19.8130148022848	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	-1	True	NA	NA	False	TATAAA	-42	NA	19958683	20019963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_2579.nnic	chr1	-	2648	5	NNC	ENSG00000116922.15	novel	2696	5	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	104.561883590532	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	1672	False	NA	-1	True	AATAAA	-13	NA	37690580	37681569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689490_37689884_37690215
transcript_25791.nic	chr13	+	818	3	ISM	ENSG00000121741.17	ENST00000382871.3	5051	26	-99	116131	7	-32477	5prime_fragment	FALSE	canonical	3	88	junction_2	111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGGCATCCTCTCA	-1	True	NA	NA	False	NA	NA	NA	19958683	19970615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19958842_19959957_19960027_19970024
transcript_25793.nic	chr13	+	2184	3	ISM	ENSG00000121741.17	ENST00000382881.7	1912	8	7	24944	7	-8073	intron_retention	FALSE	canonical	3	294	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTAGAGACGGAGTC	-1	True	NA	NA	False	ATTAAA	-15	NA	19958683	19995019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_19958842_19959957_19960027_19993062
transcript_25796.known	chr13	-	1483	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	3.36852174930046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTCTCTTTTGGTTT	-22	True	NA	-1	True	AATAAA	-21	NA	20525857	20403668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
transcript_25797.known	chr13	-	1331	7	FSM	ENSG00000165475.15	ENST00000644593.1	1331	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.94694069321861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCTTTTGGTTTTT	-30	True	NA	1	True	AATAAA	-23	NA	20525865	20403666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20489369_20489497_20512442_20512551_20525753
transcript_25799.known	chr13	+	2850	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	0	0	0	0	multi-exon	TRUE	canonical	2	30	junction_14	12.9122577421611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTATGTAGTCA	-14	True	NA	94	True	AATAAA	-21	NA	20567156	20691444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_2580.known	chr1	-	2696	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	92.393181566607	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-14	True	NA	-1	True	AATAAA	-13	NA	37690529	37681569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
transcript_2581.known	chr1	-	919	5	FSM	ENSG00000116922.15	ENST00000464085.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	95.3136270425169	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAGACCACGGGTAC	11	True	NA	NA	False	NA	NA	NA	37690504	37683110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690215
transcript_25810.nic	chr13	+	1447	3	ISM	ENSG00000032742.18	ENST00000351808.10	2850	26	-39	107276	-20	1152	5prime_fragment	FALSE	canonical	3	59	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATTTGGATAGTAAGGA	-3	True	NA	NA	False	NA	NA	NA	20567117	20584168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_20567257_20574379_20574476_20582956
transcript_25811.known	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	7.17635004720366	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-12	True	NA	NA	False	NA	NA	NA	20773961	20728730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
transcript_25812.nnic	chr13	-	791	4	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	22.6421435969889	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	NA	False	NA	-30	True	AATAAA	-15	NA	20773981	20728930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_20729217_20731840_20732122_20757454_20757618_20773920
transcript_25813.nnic	chr13	-	510	3	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	23.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	NA	False	NA	-30	True	AATAAA	-15	NA	20773981	20728930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_20729217_20757454_20757618_20773920
transcript_25814.known	chr13	-	9921	23	FSM	ENSG00000132953.18	ENST00000255305.11	9857	23	-64	0	-63	0	multi-exon	TRUE	non_canonical	0	0	junction_3	35.5978746231562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAAAACAGATTTCAT	217	False	NA	-6	True	AATAAA	-22	NA	20902810	20777328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_20783920_20786964_20787058_20787480_20787599_20788485_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
transcript_25815.nic	chr13	-	1443	4	ISM	ENSG00000132953.18	ENST00000490513.1	914	5	274	6148	-27	-6148	5prime_fragment	FALSE	canonical	3	23	junction_2	76.38498979948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAAATGTGCAAG	-4	True	NA	NA	False	NA	NA	NA	20902774	20861781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_20862859_20862968_20863124_20868595_20868702_20902669
transcript_25816.nic	chr13	-	739	4	ISM	ENSG00000132953.18	ENST00000490513.1	914	5	274	6852	-27	5927	5prime_fragment	FALSE	canonical	3	23	junction_2	76.38498979948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-4	True	NA	NA	False	AAAAAG	-9	NA	20902774	20862485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_20862859_20862968_20863124_20868595_20868702_20902669
transcript_25818.nic	chr13	-	584	3	ISM	ENSG00000132953.18	ENST00000255305.11	9857	23	-28	85157	-27	5927	5prime_fragment	FALSE	canonical	3	155	junction_1	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-4	True	NA	NA	False	AAAAAG	-9	NA	20902774	20862485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_20862859_20868595_20868702_20902669
transcript_2582.known	chr1	-	2355	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	110.005681671448	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-5	True	NA	-1	True	AATAAA	-13	NA	37690520	37681569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
transcript_25827.known	chr13	+	2234	4	FSM	ENSG00000150459.12	ENST00000607003.5	2234	4	0	0	0	0	multi-exon	FALSE	canonical	3	2924	junction_2	115.467167050494	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTGCTCAGTGCTTTA	-8	True	NA	9	True	AATAAA	-19	NA	21140577	21149082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_21140682_21140885_21140996_21146804_21146928_21147185
transcript_2583.nic	chr1	-	2716	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	99.497173326683	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-31	True	NA	-1	True	AATAAA	-13	NA	37690546	37681569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690001
transcript_25834.known	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	88.5549793913363	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	6	True	NA	-1	True	AATAAA	-19	NA	21176552	21153594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25835.nic	chr13	-	2629	9	NIC	ENSG00000165480.16	novel	2869	9	NA	NA	-58	-325	combination_of_known_junctions	FALSE	canonical	3	71	junction_8	146.477814019735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGATACTTAGTTTTG	773	False	NA	-75	True	AATAAA	-2	NA	21176610	21153919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176347
transcript_25843.known	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	134.502105286611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	10	True	NA	-1	True	AATAAA	-19	NA	21176548	21153594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
transcript_25845.known	chr13	-	2745	8	FSM	ENSG00000165480.16	ENST00000400018.7	2745	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	161.696112053015	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	11	True	NA	-1	True	AATAAA	-19	NA	21176547	21153594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25865.nic	chr13	-	980	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-52	14283	-52	344	5prime_fragment	FALSE	canonical	3	464	junction_3	57.9674238018408	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAGATATTTATTTAT	779	False	NA	4	True	AATAAA	-28	NA	21176604	21167877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25867.nic	chr13	-	742	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-52	14521	-52	106	5prime_fragment	FALSE	canonical	3	464	junction_3	57.9674238018408	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCACTAAAAATGGATGA	779	False	NA	36	True	AGTAAA	-20	NA	21176604	21168115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_25868.known	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	171.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	7	True	NA	NA	False	NA	NA	NA	21176551	21154696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21155151_21155692_21155812_21176374
transcript_25875.known	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1550	junction_1	0	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	-15	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_21176718_21176911
transcript_25878.nnic	chr13	+	1481	3	NIC	ENSG00000233325.4	novel	1310	3	NA	NA	1	0	intron_retention	FALSE	canonical	3	17	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGATTTTATTTC	-27	True	NA	NA	False	AATAAA	-15	NA	21298133	21305518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_21298363_21301418_21301619_21304466
transcript_25882.nnic	chr13	+	2157	2	Antisense	novelGene_ENSG00000224429.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTCTTTTTTCTGGTG	NA	False	NA	13	True	ATTAAA	-18	NA	21327054	21332433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_21327501_21330722
transcript_25884.known	chr13	-	1885	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_4	33.7462578274299	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGTGCTTTTTATTT	-8	True	NA	NA	False	AATAAA	-23	NA	21604170	21492690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_25885.known	chr13	-	603	1	FSM	ENSG00000226525.5	ENST00000464254.1	603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATTCACACACAT	44	False	NA	NA	False	NA	NA	NA	21629015	21628412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_21628400_21629000
transcript_25886.known	chr13	-	3464	10	FSM	ENSG00000151835.17	ENST00000423156.2	3464	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.2655796619827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCGTAATGGGTGTT	0	True	NA	-10	True	AATAAA	-17	NA	23433740	23328832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_23329485_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
transcript_25889.known	chr13	-	2500	2	FSM	ENSG00000151835.17	ENST00000683638.1	2500	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACACCATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	23433763	23409389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_23411741_23433614
transcript_2589.known	chr1	+	2303	11	FSM	ENSG00000134690.11	ENST00000327331.2	2303	11	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_1	83.9321154266947	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATCACTGTTCATCCT	-2	True	NA	32	True	AATAAA	-21	NA	37692480	37709713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37692579_37692675_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_25892.nic	chr13	-	2222	19	NIC	ENSG00000027001.10	novel	2381	19	NA	NA	611	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_18	48.909843993885	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTTTCACCTGTTT	635	False	NA	-23	True	AATAAA	-17	NA	23888787	23730188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23888677
transcript_25893.known	chr13	-	2381	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_12	23.1095752694809	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTTTCACCTGTTT	22	True	NA	-23	True	AATAAA	-17	NA	23889400	23730188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
transcript_25894.known	chr13	+	852	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGTGAACAACTTTGG	NA	False	NA	8	True	AATAAA	-20	NA	23888841	23892104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
transcript_25895.known	chr13	-	5437	34	FSM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_27	28.4013282323683	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTTCTGTGTCTCA	-12	True	NA	-5	True	AATAAA	-16	NA	24512778	24420930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_24421315_24426465_24426599_24431376_24431477_24434394_24435475_24441845_24441969_24442589_24442686_24443649_24443731_24446680_24446762_24447015_24447187_24449717_24449818_24452405_24452594_24453586_24453655_24455016_24455213_24456340_24456479_24459043_24459123_24459263_24459311_24459971_24460137_24469023_24469111_24469893_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
transcript_25896.nic	chr13	-	544	4	ISM	ENSG00000102699.6	ENST00000381989.4	5437	34	27	79289	27	-43823	5prime_fragment	FALSE	canonical	3	281	junction_3	7.48331477354788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTTTAATTTATTTTG	15	True	NA	NA	False	ATTAAA	-20	NA	24512751	24500219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_24500383_24501632_24501835_24503644_24503778_24512705
transcript_25898.known	chr13	-	4298	18	FSM	ENSG00000151849.16	ENST00000545981.6	4298	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	46.7930731572712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAAGTAACAGTAACTG	32	True	NA	NA	False	NA	NA	NA	24922810	24883162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24886234_24886386_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_25899.known	chr13	-	5082	17	FSM	ENSG00000151849.16	ENST00000381884.9	5082	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_15	19.5560093066045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTACAGATGTATCTA	-19	True	NA	NA	False	AATAAA	-14	NA	24922861	24882278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_25902.known	chr13	-	5020	16	FSM	ENSG00000151849.16	ENST00000616936.4	5020	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	42.0949191972407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATATAAGTACAGATGT	-47	True	NA	NA	False	AATAAA	-9	NA	24922889	24882283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_25909.known	chr13	-	5117	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	12.3028836760152	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTTCTAGGAAAGTAAA	-26	True	NA	NA	False	AATAAA	-20	NA	25287488	25246221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
transcript_25910.known	chr13	+	4236	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	22.9720603245672	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	-6	True	NA	32	True	AATAAA	-29	NA	25301624	25342421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_25916.known	chr13	-	3398	5	FSM	ENSG00000127870.17	ENST00000381570.7	3398	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	46.6744041204599	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	587	False	NA	-20	True	AATAAA	-13	NA	26221703	26212774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221513
transcript_25917.known	chr13	-	3282	5	FSM	ENSG00000127870.17	ENST00000346166.7	3282	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	37.5666075125237	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTTTTCTGTTGTTCC	-15	True	NA	-7	True	AATAAA	-26	NA	26221842	26212761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221781
transcript_25918.known	chr13	-	3520	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	31.4990079208854	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-24	True	NA	-20	True	AATAAA	-13	NA	26222314	26212774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_25919.known	chr13	-	1105	6	FSM	ENSG00000127870.17	ENST00000468480.5	1105	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.8526476364551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAAGTGTATGGCAGT	29	True	NA	NA	False	ATTAAA	-21	NA	26222261	26132114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_26132452_26215473_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_2592.known	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_6	29.8812464413533	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	-20	True	NA	38	True	AATAAA	-27	NA	37692515	37709719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_25920.known	chr13	+	3065	13	FSM	ENSG00000132964.12	ENST00000381527.8	3065	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_11	12.953978367882	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGTCAGCTGTCTTTT	11	True	NA	6	True	AATAAA	-22	NA	26254128	26405238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26382813_26382872_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401465_26401625_26403955
transcript_25924.known	chr13	+	566	6	FSM	ENSG00000122026.11	ENST00000311549.11	566	6	0	0	0	0	multi-exon	FALSE	canonical	3	12328	junction_1	2750.17683795061	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	2	True	NA	6	True	AATAAA	-21	NA	27251557	27256568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_25926.known	chr13	+	616	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	7519.19576550578	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	-8	True	NA	6	True	AATAAA	-21	NA	27251578	27256568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_25927.known	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	7577.80491699278	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	10	True	NA	6	True	AATAAA	-21	NA	27251596	27256568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_25928.known	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7595.34836594083	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	-4	True	NA	6	True	AATAAA	-21	NA	27251582	27256568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_25936.known	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_7	96.3518941173447	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	-18	True	NA	4	True	ATTAAA	-17	NA	27424618	27435823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_25937.known	chr13	+	1191	8	FSM	ENSG00000122034.17	ENST00000419181.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	301.750471314919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	25	True	NA	14	True	ATTAAA	-16	NA	27424661	27435688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_25938.known	chr13	-	1104	7	FSM	ENSG00000122033.15	ENST00000381116.5	1104	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	240.063475402282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	7	True	NA	-4	True	AATAAA	-23	NA	27450564	27435642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27449851_27449919_27450508
transcript_25948.nic	chr13	-	1006	5	NIC	ENSG00000122033.15	novel	1104	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	204.159710765861	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-23	True	NA	-4	True	AATAAA	-23	NA	27450594	27435642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450508
transcript_25950.nic	chr13	-	1062	5	NIC	ENSG00000122033.15	novel	995	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	198.667435680838	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-18	True	NA	-4	True	AATAAA	-23	NA	27450186	27435642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450063
transcript_25951.nic	chr13	-	1310	5	NIC	ENSG00000122033.15	novel	995	5	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	206.697091174501	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	730	False	NA	-4	True	AATAAA	-23	NA	27450512	27435642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450141
transcript_25952.known	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_4	62.547481963705	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	7	True	NA	-4	True	AATAAA	-23	NA	27450564	27435642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
transcript_25953.known	chr13	-	798	5	FSM	ENSG00000122033.15	ENST00000485650.5	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	203.841850462558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAAATGTAGACGTGT	-20	True	NA	NA	False	CATAAA	-4	NA	27450591	27437149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445157_27450508
transcript_25958.known	chr13	-	947	5	FSM	ENSG00000122033.15	ENST00000461838.5	947	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	218.557057767531	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGTAATTTTAATAAAG	1111	False	NA	-45	True	NA	NA	NA	27450131	27435683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450063
transcript_25959.known	chr13	-	373	3	FSM	ENSG00000122033.15	ENST00000484342.2	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	203.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCAGCGAGTTATTCA	-16	True	NA	NA	False	AATAAA	-28	NA	27450587	27440205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_27440450_27445087_27445138_27450508
transcript_25960.known	chr13	+	1606	3	FSM	ENSG00000186184.20	ENST00000621089.2	1606	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTTTCTACATGCT	-7	True	NA	NA	False	NA	NA	NA	27620946	27667022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27621141_27648378_27648454_27665685
transcript_25961.known	chr13	+	1723	3	FSM	ENSG00000186184.20	ENST00000489647.4	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	154.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTCAACCTGTATCTA	-13	True	NA	NA	False	AATGAA	-10	NA	27621869	27651549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27648378_27648454_27650041
transcript_25963.known	chr13	+	1931	3	FSM	ENSG00000186184.20	ENST00000630983.1	1931	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	160	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	-8	True	NA	18	True	AATAAA	-14	NA	27621874	27667410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27648378_27648450_27665685
transcript_25966.known	chr13	+	693	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	0	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	9	True	NA	30	True	AATAAA	-19	NA	27621891	27623449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27622874
transcript_25968.known	chr13	+	668	2	FSM	ENSG00000186184.20	ENST00000399696.3	668	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGACTGGTTTCTGTTCC	71	False	NA	33	True	AATAAA	-22	NA	27621953	27623452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_27622010_27622840
transcript_25972.known	chr13	+	1428	7	FSM	ENSG00000132963.8	ENST00000460403.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4024.75662480216	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTTGATTAGATAAATT	-35	True	NA	NA	False	ATTAAA	-31	NA	28659103	28678925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_28659188_28659821_28659920_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_25974.known	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7301	junction_1	650.754823262955	3112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	-9	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_25977.known	chr13	-	4317	5	FSM	ENSG00000122042.10	ENST00000380680.5	4317	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	13.7908484148003	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTATTTGCCTATT	9	True	NA	0	True	TTTAAA	-18	NA	29850617	29764370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_29767308_29767617_29767696_29772111_29772199_29777154_29777264_29849511
transcript_25979.nnic	chr13	-	2320	11	NNC	ENSG00000102781.14	novel	7618	11	NA	NA	15	440	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	5.76194411635517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTACTGTTAGAGTCTG	-1	True	NA	NA	False	ATTAAA	-14	NA	30307011	30208039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306678
transcript_25980.known	chr13	-	1634	11	FSM	ENSG00000102781.14	ENST00000380617.7	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	5.11957029446808	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAAAACAAGTTT	522	False	NA	-32	True	GATAAA	-19	NA	30307026	30208479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306939
transcript_25981.known	chr13	-	7618	11	FSM	ENSG00000102781.14	ENST00000380615.8	7618	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	4.02492235949962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTTCTTTGTGGTTCAT	-3	True	NA	-4	True	AATAAA	-22	NA	30307551	30202629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30307330
transcript_2599.known	chr1	-	421	2	FSM	ENSG00000183317.17	ENST00000444950.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGGGACAAAGTATGTT	NA	False	NA	NA	False	AATAAA	-13	NA	37715020	37713892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37714024_37714730
transcript_25990.known	chr13	-	821	5	FSM	ENSG00000189403.15	ENST00000326004.4	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4807.76923323073	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAAAGGGAGTTGTCA	-3	True	NA	NA	False	NA	NA	NA	30465938	30461495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30461689_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_25993.known	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_4	5239.33342014993	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-8	True	NA	-42	True	AATAAA	-24	NA	30464310	30459849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
transcript_25994.known	chr13	-	5456	5	FSM	ENSG00000189403.15	ENST00000341423.10	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	2284	junction_1	3842.76621556659	5269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTTTTACTGGTTTT	-1	True	NA	-5	True	NA	NA	NA	30465936	30456703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_26.known	ERCC-00073	+	587	1	FSM	ERCC-00073A	DQ668358	587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00073_+_0_600
transcript_26008.known	chr13	+	4894	9	FSM	ENSG00000132952.12	ENST00000255304.9	4894	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	24.2535435555302	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	2	True	NA	NA	False	AATAAA	-28	NA	30617919	30660766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_30618057_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_26009.nic	chr13	+	3529	8	NIC	ENSG00000132952.12	novel	4894	9	NA	NA	-18	-1216	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	31.6156768140137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTTTGGTTTCATTTT	14	False	NA	3	True	ATTAAA	-16	NA	30617901	30659550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_30618057_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_26016.nnic	chr13	+	733	5	NNC	ENSG00000236094.3	novel	641	3	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.9067059000926	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863393	30883395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_30863579_30875273_30875367_30881951_30882005_30882559_30882660_30883093
transcript_26019.nnic	chr13	+	641	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.3762239633207	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863392	30883395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_30863579_30881951_30882005_30882559_30882660_30883093
transcript_26022.nnic	chr13	+	680	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	61.6008657947814	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863393	30883395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_30863579_30875273_30875367_30882559_30882660_30883093
transcript_26025.nnic	chr13	+	654	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	-42	29	-42	0	multi-exon	FALSE	canonical	3	64	junction_1	50	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863326	30883395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_30863579_30882559_30882660_30883093
transcript_26029.nic	chr13	-	3457	19	NIC	ENSG00000120694.20	novel	5244	18	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	215.664555774202	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	672	False	NA	-14	True	AATAAA	-27	NA	31162019	31136624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_31137118_31137367_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_2603.known	chr1	+	2229	2	FSM	ENSG00000197982.14	ENST00000373043.1	2229	2	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTGACCGACGTTTCC	NA	False	NA	27	True	ATTAAA	-18	NA	37806978	37809452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_37808733_37808977
transcript_26031.known	chr13	-	5244	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_9	98.5471274679274	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTGAGTCTACTT	-1	True	NA	51	True	NA	NA	NA	31161904	31134972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_26032.known	chr13	-	3570	18	FSM	ENSG00000120694.20	ENST00000630972.2	3570	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_17	219.165387614075	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	303	False	NA	-14	True	AATAAA	-27	NA	31162388	31136624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161981
transcript_2604.known	chr1	-	7937	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.02654919008431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAGTATCTGTGGCAT	4	True	NA	-6	True	ATTAAA	-35	NA	37859592	37809573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
transcript_26042.known	chr13	-	3480	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	230.307097969212	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGATTTTGTCACT	764	False	NA	-17	True	AATAAA	-24	NA	31161927	31136627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_26046.nic	chr13	-	2324	14	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-115	5304	20	-1738	5prime_fragment	FALSE	canonical	3	717	junction_5	104.297367312902	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAATGATGCTAAAAA	672	False	NA	NA	False	GATAAA	-10	NA	31162019	31140276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_26048.nic	chr13	-	2154	12	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-115	8818	20	-5252	5prime_fragment	FALSE	canonical	3	717	junction_3	80.0732103032248	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGACTCTTCTAGTTCA	672	False	NA	0	True	AAGAAA	-25	NA	31162019	31143790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_26051.nic	chr13	+	2830	11	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-43	63325	-40	3652	5prime_fragment	FALSE	canonical	3	16	junction_10	6.10245852095694	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAAGAAACTACTTCAA	379	False	NA	NA	False	AAAACA	-26	NA	32315464	32336943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271_32333388_32336264
transcript_26052.known	chr13	+	2011	10	FSM	ENSG00000139618.17	ENST00000530893.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.78030270429573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	12	True	NA	NA	False	TATAAA	-11	NA	32315504	32333291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_32315668_32316421_32316524_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_26065.known	chr13	-	5649	7	FSM	ENSG00000244754.9	ENST00000674349.1	5649	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	77.5207857430652	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGAGGATATGAAAT	-1	True	NA	NA	False	NA	NA	NA	32538825	32514019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
transcript_26066.known	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	6.49923072370877	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	4	True	NA	1	True	AATAAA	-16	NA	32538782	32510291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
transcript_26067.known	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_5	47.8664809652851	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-16	True	NA	-16	True	AATAAA	-17	NA	32538802	32517620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
transcript_26068.known	chr13	-	2701	6	FSM	ENSG00000244754.9	ENST00000674465.1	2701	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	82.5120597246245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-1	True	NA	-13	True	ATTAAA	-10	NA	32538825	32516900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538777
transcript_2607.nic	chr1	-	1284	2	ISM	ENSG00000188786.10	ENST00000373036.5	7937	11	-16	46930	-16	845	5prime_fragment	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGAAATTCAGGCT	-12	False	NA	NA	False	NA	NA	NA	37859608	37856503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_37857710_37859530
transcript_26070.known	chr13	-	2706	6	FSM	ENSG00000244754.9	ENST00000674399.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	85.2478738737806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGAATATCTTCTAGT	-1	True	NA	NA	False	TATAAA	-44	NA	32538825	32517005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527457_32527533_32535768_32537028_32538617
transcript_26085.known	chr13	-	1566	5	FSM	ENSG00000244754.9	ENST00000674180.1	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	95.5964826758809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGGAATTCATTTCAG	-9	True	NA	-19	True	ATTAAA	-4	NA	32538795	32516906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32538617
transcript_2609.known	chr1	-	4450	24	FSM	ENSG00000204084.13	ENST00000373024.8	4450	24	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	87.5329589559937	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-14	True	NA	-2	True	GATAAA	-17	NA	37947053	37860696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
transcript_26095.known	chr13	-	2181	3	FSM	ENSG00000244754.9	ENST00000674433.1	2181	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	-1	True	NA	NA	False	AAAAAG	-30	NA	32538825	32526818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32527533_32535768_32537028_32538617
transcript_26096.known	chr13	-	2055	3	FSM	ENSG00000244754.9	ENST00000674494.1	2055	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	57	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGGACTTTAAAAAAA	9	False	NA	NA	False	NA	NA	NA	32538815	32526869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32527533_32535768_32537028_32538682
transcript_26097.known	chr13	-	3573	3	FSM	ENSG00000244754.9	ENST00000483088.2	3573	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACAGATTGAGACCCTG	5	True	NA	NA	False	NA	NA	NA	32538819	32533563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32537028_32538617_32538685_32538777
transcript_26098.known	chr13	-	3691	2	FSM	ENSG00000244754.9	ENST00000674369.1	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	32538825	32533544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32537028_32538617
transcript_26099.known	chr13	-	3626	2	FSM	ENSG00000244754.9	ENST00000674276.1	3626	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	32538825	32533544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32537028_32538682
transcript_261.known	chr1	-	2114	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_8	42.5069387718052	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-3	True	NA	-15	True	AGTAAA	-15	NA	1324660	1311599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_26100.known	chr13	-	3518	2	FSM	ENSG00000244754.9	ENST00000674462.1	3518	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGAGACCCTGTCTCAA	-1	True	NA	NA	False	NA	NA	NA	32538825	32533557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_32537028_32538777
transcript_26101.known	chr13	+	7472	35	FSM	ENSG00000083642.19	ENST00000315596.15	7472	35	0	0	0	0	multi-exon	TRUE	canonical	2	160	junction_31	30.7740959688333	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	-10	True	NA	NA	False	AATAAA	-13	NA	32586451	32778019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764595_32770120_32770561_32770653_32770762_32773188_32773325_32775016
transcript_26108.nic	chr13	+	2111	9	ISM	ENSG00000083642.19	ENST00000498550.5	4238	13	-91	14321	0	-14321	5prime_fragment	FALSE	canonical	2	174	junction_3	28.4692816909735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATTTAAAGGC	-10	True	NA	NA	False	NA	NA	NA	32586451	32676947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843
transcript_2611.known	chr1	-	3905	18	FSM	ENSG00000204084.13	ENST00000373027.5	3905	18	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_7	25.4374869817094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-15	True	NA	-2	True	GATAAA	-17	NA	37931749	37860696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672
transcript_26115.known	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_8	46.1410879802373	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	-5	True	NA	21	True	AATAAA	-18	NA	33818148	33837500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
transcript_26116.known	chr13	+	1461	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	159.485060036983	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTCTGCTATTTTCT	-5	True	NA	28	True	AATAAA	-27	NA	33818068	33966558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
transcript_26128.nic	chr13	+	1835	10	ISM	ENSG00000172915.20	ENST00000689207.1	4446	29	-580	433962	-580	-401	5prime_fragment	FALSE	canonical	0	0	junction_3	13.4834145948199	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACACCAACTCCTGGTGA	NA	False	NA	NA	False	CATAAA	-8	NA	35159301	35195901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_35160033_35161749_35161968_35164355_35164510_35168986_35168996_35171271_35171453_35173463_35173595_35176995_35177104_35182359_35182529_35183975_35184072_35195863
transcript_26129.known	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.8273286751227	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	120	False	NA	-4	True	AATAAA	-14	NA	35855642	35771338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
transcript_26136.known	chr13	-	5247	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTCAGTGAGTTTC	NA	False	NA	-1	True	AATAAA	-15	NA	35855784	35845899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_35850777_35854498_35854594_35855509
transcript_26141.known	chr13	-	2051	16	FSM	ENSG00000250709.1	ENST00000511166.1	2051	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	71.8831150008277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCTACAAGAACAAATGG	-17	True	NA	NA	False	NA	NA	NA	36297842	36168793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36227347_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_26142.nnic	chr13	-	2671	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-36	577	combination_of_known_splicesites	FALSE	canonical	3	122	junction_5	50.9629931093795	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-53	True	NA	-12	True	AATAAA	-21	NA	36297878	36168216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_26143.nnic	chr13	-	2618	15	NNC	ENSG00000250709.1	novel	2051	16	NA	NA	-36	577	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	66.6546077529069	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-53	True	NA	-12	True	AATAAA	-21	NA	36297878	36168216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193714_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_26144.nnic	chr13	-	2630	15	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-36	577	combination_of_known_splicesites	FALSE	canonical	3	57	junction_13	52.9786730290441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-53	True	NA	-12	True	AATAAA	-21	NA	36297878	36168216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_26146.nnic	chr13	-	2519	14	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-36	577	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	55.7958026883128	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-53	True	NA	-12	True	AATAAA	-21	NA	36297878	36168216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36297636
transcript_26148.known	chr13	-	837	8	FSM	ENSG00000242715.8	ENST00000503173.5	837	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	80.511629277885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	76	False	NA	-82	True	NA	NA	NA	36297749	36227119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_26149.known	chr13	-	1158	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	71.4437126809116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGTCCATTTTAAG	11	True	NA	NA	False	TTTAAA	-22	NA	36297814	36230774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_2615.known	chr1	-	2774	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_7	109.103090584089	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-8	True	NA	-6	True	AATAAA	-18	NA	37990022	37956974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_26151.nnic	chr13	-	844	7	Fusion	ENSG00000242715.8_ENSG00000120669.16	novel	541	5	NA	NA	-43	-19887	multi-exon	FALSE	canonical	3	147	junction_1	48.0049187294617	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACTTCAAAAGCCTTGA	-58	True	NA	NA	False	NA	NA	NA	36297883	36201878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr13_-_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_26152.known	chr13	-	753	7	FSM	ENSG00000242715.8	ENST00000491049.6	753	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	101.918267907836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	76	False	NA	-82	True	NA	NA	NA	36297749	36227119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_26153.known	chr13	-	624	7	FSM	ENSG00000242715.8	ENST00000379862.6	624	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	95.0954199154138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCCATTTATAAT	74	False	NA	NA	False	NA	NA	NA	36297751	36231161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_26156.known	chr13	-	716	6	FSM	ENSG00000242715.8	ENST00000239860.10	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	104.741586774309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	76	False	NA	-82	True	NA	NA	NA	36297749	36227119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_26159.known	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	69.6132171358284	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-7	True	NA	-13	True	AATAAA	-17	NA	36297832	36280056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_26162.nic	chr13	-	1603	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	84.7007805290023	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-58	True	NA	-13	True	AATAAA	-17	NA	36297883	36280056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36281261_36283468_36283510_36283591_36283703_36297636
transcript_26163.nnic	chr13	-	1645	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	77.4611013491431	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-61	False	NA	-13	True	AATAAA	-17	NA	36297886	36280056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36281261_36283591_36283703_36295777_36295858_36297636
transcript_26164.nic	chr13	-	1916	4	NIC	ENSG00000242715.8	novel	887	3	NA	NA	-46	896	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	41.3145118437685	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATCTCTCTTTTATTGT	-61	False	NA	NA	False	ATTAAA	-22	NA	36297886	36281931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36283407_36283591_36283703_36295777_36295858_36297636
transcript_26165.nic	chr13	-	1960	4	ISM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	1880	0	891	5prime_fragment	FALSE	canonical	3	148	junction_2	54.9504827599863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTTTATCTCTCTTTT	-7	True	NA	NA	False	ATTAAA	-17	NA	36297832	36281936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_36283510_36283591_36283703_36295777_36295858_36297636
transcript_26166.nnic	chr13	-	1562	3	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	122.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-58	True	NA	-13	True	AATAAA	-17	NA	36297883	36280056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36281261_36283591_36283703_36297636
transcript_26167.known	chr13	-	887	3	FSM	ENSG00000242715.8	ENST00000485600.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	50.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTAGGGCATATCTAAG	-12	True	NA	NA	False	AGTAAA	-2	NA	36297837	36282827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36283407_36283591_36283699_36297636
transcript_26169.nnic	chr13	-	3037	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_9	229.012587933718	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	-21	True	NA	-12	True	ATTAAA	-17	NA	36346780	36303601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_2617.known	chr1	-	1091	6	FSM	ENSG00000183386.10	ENST00000477194.5	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	59.1046529471242	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACCTCTGGGACTCA	7147	False	NA	NA	False	NA	NA	NA	38005606	37997344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005438
transcript_26170.nnic	chr13	-	2920	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-3	-117	combination_of_known_splicesites	FALSE	canonical	3	134	junction_9	229.012587933718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGAGACTGTATT	-21	True	NA	-17	True	AATAAA	-21	NA	36346780	36303718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_26171.known	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	209.530278241594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-19	True	NA	0	True	TATAAA	-21	NA	36346394	36301637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_26173.known	chr13	-	4944	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_8	70.8025423272357	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTTTTCTTGACCT	NA	False	NA	-2	True	TATAAA	-19	NA	36346797	36301639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_2618.nnic	chr1	-	1431	5	NIC	ENSG00000183386.10	novel	1656	6	NA	NA	-33	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	86.1869334644179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	7206	False	NA	-9	True	AATAAA	-14	NA	38005547	37996769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_38005438
transcript_26183.known	chr13	-	2001	5	FSM	ENSG00000133104.14	ENST00000495510.1	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	271.645334029503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTAGTTTATGATAT	476	False	NA	NA	False	AATAAA	-15	NA	36346283	36325922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_26186.known	chr13	+	1699	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.06664701255129	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	28	False	NA	3	True	AATAAA	-16	NA	36432522	36442870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_26187.known	chr13	+	1730	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.75302360373035	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	0	True	NA	3	True	AATAAA	-16	NA	36432494	36442870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_26188.known	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	-29	True	NA	15	True	ATTAAA	-21	NA	36819221	36829104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_36819958_36825427_36825536_36827642
transcript_26194.known	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	129.513205504304	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	28	False	37059716	-24	True	AATACA	-25	NA	37059688	37009311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_26206.known	chr13	-	2681	25	FSM	ENSG00000102710.21	ENST00000356185.7	2681	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_20	139.417812308503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGGTTTGCCTAAG	4	True	NA	95	True	AATAAA	-23	NA	37059650	37009493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059479
transcript_26207.known	chr13	-	2843	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_20	109.382737821529	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTGGCTGTTTAT	3	False	NA	-28	True	AATACA	-21	NA	37059713	37009315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_26208.known	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	108.036251310485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	5	True	NA	96	True	AATAAA	-24	NA	37059649	37009492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_2621.known	chr1	+	2023	8	FSM	ENSG00000183520.12	ENST00000373014.5	2023	8	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_4	62.9713248637985	572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATAGTGTTTTATCTAG	3	True	NA	19	True	AATAAA	-16	NA	38012733	38024820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_38012866_38016358_38016421_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
transcript_26242.known	chr13	+	1166	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	0	0	0	0	multi-exon	FALSE	canonical	1	567	junction_10	396.674186203237	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	-2	True	NA	19	True	ATTAAA	-24	NA	37000785	37009614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_26250.known	chr13	-	1064	11	FSM	ENSG00000120697.10	ENST00000681581.1	1064	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	159.659919829618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGTAAAGACCTACTT	-6	True	NA	NA	False	TTTAAA	-40	NA	36999336	36950024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36967671_36967808_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_2626.known	chr1	+	675	3	FSM	ENSG00000228436.4	ENST00000663032.2	770	3	0	95	0	35	multi-exon	FALSE	canonical	1	1	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGATGACTGAGATTA	15	False	NA	NA	False	AATAAA	-26	NA	38859911	38919431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_38860240_38913539_38913629_38919173
transcript_26261.known	chr13	-	1219	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	32.9706191691188	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-10	True	NA	1	True	TATAAA	-33	NA	36999340	36949737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_26262.known	chr13	-	1057	10	FSM	ENSG00000120697.10	ENST00000681893.1	1057	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	124.125384636307	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	338	False	NA	-12	True	AATAAA	-15	NA	37000741	36949838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_37000696
transcript_26263.known	chr13	-	1110	10	FSM	ENSG00000120697.10	ENST00000680795.1	1110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	168.666959449314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTCTGCCTTTTG	6	True	NA	-22	True	AATAAA	-5	NA	36999324	36949848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995426_36995617_36999234
transcript_26266.known	chr13	+	694	9	FSM	ENSG00000120699.14	ENST00000239893.9	694	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	765.729390842483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGTTCCCGCCACTTC	-5	True	NA	NA	False	NA	NA	NA	37000782	37008833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_37000823_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008061_37008178_37008728
transcript_26268.known	chr13	-	1064	9	FSM	ENSG00000120697.10	ENST00000681043.1	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	133.368849436441	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-12	True	NA	-21	True	AATAAA	-6	NA	36999342	36949847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
transcript_2627.known	chr1	-	2681	7	FSM	ENSG00000116954.8	ENST00000373001.4	2681	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	12.7671453348037	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTCTCCTTGCCTG	-5	True	NA	0	True	AATAAA	-17	NA	38859772	38838197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_38839705_38845938_38846088_38851614_38851758_38852373_38852489_38855707_38855908_38856878_38857083_38859409
transcript_26271.known	chr13	-	901	9	FSM	ENSG00000120697.10	ENST00000679837.1	901	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	137.441749024814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGCAGTCTTCAGTT	-10	True	NA	-115	True	AATGAA	-5	NA	36999340	36949941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_26272.known	chr13	-	1044	9	FSM	ENSG00000120697.10	ENST00000680671.1	1044	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	137.224212058222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTCATTGTCTGCCT	-10	True	NA	-26	True	AATAAA	-1	NA	36999340	36949852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_26273.known	chr13	-	919	9	FSM	ENSG00000120697.10	ENST00000680488.1	919	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	132.305930989506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGCCTTTTGATA	30	True	NA	-19	True	AATAAA	-8	NA	36999300	36949845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_26274.known	chr13	-	734	9	FSM	ENSG00000102710.21	ENST00000497318.1	734	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	165.712099739277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTTGTTTTTTA	25	True	NA	NA	False	NA	NA	NA	37059629	37040404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_26278.known	chr13	-	960	8	FSM	ENSG00000120697.10	ENST00000679673.1	960	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	142.577154193648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	30	True	NA	1	True	TATAAA	-33	NA	36999300	36949737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36999234
transcript_26279.known	chr13	-	2765	8	FSM	ENSG00000120697.10	ENST00000681151.1	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	35.8875795693571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAAACTTCTTGTCAT	25	True	NA	-35	True	AGTAAA	-3	NA	36999305	36949861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36995597_36999234
transcript_26282.known	chr13	-	2354	5	FSM	ENSG00000120697.10	ENST00000681892.1	2354	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	39.2770607352434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTAGTCCCAGCTACTTA	10	True	NA	NA	False	NA	NA	NA	36999320	36984242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36985741_36989483_36989577_36993603_36993673_36994988_36995597_36999234
transcript_26283.known	chr13	-	1746	5	FSM	ENSG00000120697.10	ENST00000681727.1	1746	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	168.585846084421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGGCCAGGTTTACATG	25	True	NA	NA	False	ATTAAA	-8	NA	36999305	36984399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
transcript_26284.known	chr13	-	2625	25	FSM	ENSG00000102710.21	ENST00000464744.5	2625	25	0	0	0	0	multi-exon	FALSE	canonical	2	76	junction_24	145.033688615209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTTTCTACTTTTTG	1	True	NA	-28	True	TTTAAA	-25	NA	37059432	37009616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059194
transcript_26285.known	chr13	-	3196	22	FSM	ENSG00000133110.15	ENST00000379743.8	3196	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.10387828898805	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATTAGTGTTTCTTGA	16	False	NA	NA	False	ATTAAA	-10	NA	37598750	37562590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37563371_37564518_37564561_37569299_37569384_37569743_37569822_37570579_37570670_37571368_37571459_37577752_37577799_37578843_37578912_37579018_37579122_37579228_37579360_37579860_37579992_37580560_37580698_37582365_37582515_37583968_37584104_37584715_37584929_37586138_37586281_37586781_37586929_37587821_37587987_37590371_37590530_37592099_37592165_37597183_37597283_37598607
transcript_26286.known	chr13	-	7979	11	FSM	ENSG00000133107.15	ENST00000379705.8	7979	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	23.249946236497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAATCTCCTAATGGAC	6	True	NA	NA	False	ATTAAA	-20	NA	37869772	37632062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
transcript_26291.nnic	chr13	-	1758	5	NNC	ENSG00000133107.15	novel	2784	11	NA	NA	-111	-10694	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	55.2381208949037	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTATTCATCAGCTCAT	NA	False	NA	NA	False	AATAAA	-23	NA	37869913	37674121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_37674368_37692066_37692336_37745936_37746456_37782955_37783361_37869594
transcript_26292.nic	chr13	-	1724	5	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-11	37259	-11	-10696	5prime_fragment	FALSE	canonical	3	96	junction_1	24.8042335096249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCGTATTCATCAGCTC	-1	True	NA	NA	False	AATAAA	-21	NA	37869813	37674123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
transcript_26295.nic	chr13	-	2143	4	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-623	55083	-623	-28520	5prime_fragment	FALSE	canonical	3	101	junction_1	22.5437845585479	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGTTGCTCAGAAAATAT	NA	False	NA	0	True	AATAAA	-21	NA	37870425	37691947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_37692336_37745936_37746456_37782955_37783361_37869594
transcript_26296.nic	chr13	-	879	2	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	10	145815	10	-119252	5prime_fragment	FALSE	canonical	3	155	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAACATTTCTATGTAA	-14	True	NA	NA	False	AATAAA	-26	NA	37869792	37782679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_37783361_37869594
transcript_26297.known	chr13	+	3082	2	FSM	ENSG00000287477.1	ENST00000660705.1	3082	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGGAGGCTGAGGCAG	NA	False	NA	NA	False	AATACA	-44	NA	37869824	37874444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_37870667_37872204
transcript_26302.nnic	chr13	+	426	6	NNC	ENSG00000120686.12	novel	3168	6	NA	NA	-54	370	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_5	301.598143230359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGAGGCACTTTATTGTA	251	False	NA	6	True	ATTAAA	-16	NA	38349794	38360151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360040
transcript_26305.known	chr13	+	3168	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_5	56.1519367430902	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAATTCTGATTTAT	-9	True	NA	NA	False	ATTAAA	-22	NA	38349850	38363619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_26308.known	chr13	+	846	6	FSM	ENSG00000120686.12	ENST00000379649.5	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	300.76675348183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCATCTGAGATAAAAA	-9	True	NA	NA	False	ATTAAA	-17	NA	38349850	38361125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_38349922_38349998_38350228_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_26312.known	chr13	+	777	3	FSM	ENSG00000120686.12	ENST00000494372.1	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	43.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGGAGACTTAGGGTTC	-11	True	NA	NA	False	AAAAAG	-35	NA	38349848	38354885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_38349922_38349998_38350056_38354238
transcript_26313.nic	chr13	-	2355	3	ISM	ENSG00000120685.20	ENST00000625998.2	5102	12	24517	287	-781	0	3prime_fragment	FALSE	canonical	3	584	junction_2	27.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCTGTGTTTTACTA	873	False	NA	-16	True	AATAAA	-14	NA	39013559	39010152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_39011488_39012082_39012234_39012690
transcript_26315.known	chr13	+	3411	7	FSM	ENSG00000188811.14	ENST00000379600.8	3411	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	22.9177272481855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	50	True	NA	30	True	ATTAAA	-23	NA	39038455	39050109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_26318.known	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	39.9529723550076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	-15	True	NA	30	True	ATTAAA	-23	NA	39038390	39050109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
transcript_2632.known	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	36.779749863206	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	7	True	NA	-4	True	ATTAAA	-17	NA	38873348	38862492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
transcript_26320.nic	chr13	+	1023	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-132	5899	13	-254	5prime_fragment	FALSE	canonical	3	74	junction_3	23.3813494050279	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTCTGAATATGTTT	-2	True	NA	23	True	AATACA	-19	NA	39038323	39044210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_26321.nic	chr13	+	2094	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-132	4828	13	817	5prime_fragment	FALSE	canonical	3	74	junction_3	23.3813494050279	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGAGCTTGGGTGAC	-2	True	NA	5	True	ATTAAA	-14	NA	39038323	39045281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_26323.nic	chr13	+	1026	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-67	10073	13	-1781	5prime_fragment	FALSE	canonical	3	114	junction_1	11.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGCCAGGCGTGGTGGC	-2	True	NA	NA	False	AATACA	-16	NA	39038323	39040036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_26324.nic	chr13	+	1194	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-67	9905	13	-1613	5prime_fragment	FALSE	canonical	3	114	junction_1	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAATTTGACAAGGAG	-2	True	NA	NA	False	NA	NA	NA	39038323	39040204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_26326.nnic	chr13	-	1360	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180254	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_2	31	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	NA	False	NA	-3	True	AATAAA	-19	NA	39422939	39342891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_39344055_39378427_39378527_39422841
transcript_26327.nnic	chr13	-	1395	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180183	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	29.5	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	NA	False	NA	-3	True	AATAAA	-19	NA	39423010	39342891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_39344055_39378427_39378527_39422877
transcript_26328.known	chr13	+	3449	20	FSM	ENSG00000133103.17	ENST00000356576.8	3449	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	55.8570097674965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTATATAATTTATTT	38	True	NA	11	True	AATAAA	-18	NA	39655723	39752500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39655880_39656825_39656891_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
transcript_26331.known	chr13	+	3574	19	FSM	ENSG00000133103.17	ENST00000455146.8	3574	19	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	17.2634810446149	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGCAGCAATTATTGC	-24	True	NA	13	True	AATAAA	-14	NA	39655661	39752628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
transcript_26337.known	chr13	-	1486	7	FSM	ENSG00000102738.8	ENST00000323563.8	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_6	24.3629956194955	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTTTCACTCGGT	-13	True	NA	NA	False	AATACA	-21	NA	40771190	40729127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_40729602_40749137_40749282_40754018_40754093_40756872_40757014_40758947_40759107_40766745_40767034_40770984
transcript_2634.known	chr1	-	750	4	FSM	ENSG00000214114.9	ENST00000494695.4	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	146.827184888297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTGTACGGGTTCC	-13	True	NA	NA	False	NA	NA	NA	38873368	38864235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_38864715_38866879_38867000_38873017_38873091_38873290
transcript_26350.known	chr13	+	3821	7	FSM	ENSG00000102743.15	ENST00000338625.9	3821	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	20.387904911164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	0	True	NA	15	True	ATTAAA	-15	NA	40789610	40812460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542
transcript_26352.known	chr13	+	1142	7	FSM	ENSG00000102743.15	ENST00000478827.1	1142	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	84.2286900184386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGATTTGCCTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	40789411	40808470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40802134_40802301_40805117_40805256_40807293_40807464_40808437
transcript_26353.known	chr13	-	3678	9	FSM	ENSG00000120690.16	ENST00000239882.7	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	13.5963000481749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAATATCATCCTTTC	0	True	NA	NA	False	AATAAA	-16	NA	41019316	40931923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_40934029_40940920_40941371_40942951_40943145_40943841_40943926_40949805_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41019227
transcript_26354.nic	chr13	-	4035	9	NIC	ENSG00000120690.16	novel	3678	9	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	8.61593726764535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGTTTTCAGGCAAAA	2	True	NA	-2	True	AATAAA	-18	NA	41061387	40932027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_40934029_40940920_40941371_40942951_40943145_40943841_40943926_40949805_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41060837
transcript_26356.nic	chr13	-	1306	5	NIC	ENSG00000120690.16	novel	3678	9	NA	NA	53	-16368	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	8.52936105461599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGTTACTTTGTT	2	True	NA	NA	False	NA	NA	NA	41061387	40949806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41060837
transcript_26357.known	chr13	+	2388	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_8	26.1023626006025	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	-25	True	NA	NA	False	ATTAAA	-19	NA	41061508	41084006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
transcript_26366.nic	chr13	+	944	8	ISM	ENSG00000120688.9	ENST00000379487.5	2388	10	-22	7768	-22	-7768	5prime_fragment	FALSE	canonical	3	248	junction_6	22.5605760528568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTTTAAATTTTACTC	-47	True	NA	8	True	AATAAA	-9	NA	41061486	41076238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043
transcript_26369.nic	chr13	+	1112	5	ISM	ENSG00000120688.9	ENST00000379487.5	2388	10	-618	15379	-618	-15379	5prime_fragment	FALSE	canonical	3	265	junction_4	19.9874960913067	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAGAAAAGA	624	False	NA	NA	False	NA	NA	NA	41060890	41068627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560
transcript_26374.known	chr13	+	613	4	FSM	ENSG00000278390.6	ENST00000620300.4	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACATCTTACCAGGAGA	6	True	NA	NA	False	ATTAAA	-35	NA	41132951	41175659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41175372
transcript_26375.known	chr13	+	605	4	FSM	ENSG00000278390.6	ENST00000616251.2	664	4	59	0	52	0	multi-exon	FALSE	canonical	0	0	junction_3	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAACCATTGCTATTT	65	False	NA	NA	False	AATAAA	-42	NA	41133010	41187568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41187230
transcript_26391.known	chr13	-	2184	10	FSM	ENSG00000120662.16	ENST00000379480.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	25.2195299591016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTTTGACTTCTATT	-6	True	NA	-17	True	TATAAA	-25	NA	41263576	41216368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_26408.known	chr13	-	820	6	FSM	ENSG00000120662.16	ENST00000452359.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	43.5182720245186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACCAGCAGATTATGG	251	False	NA	NA	False	TATAAA	-25	NA	41263547	41252663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41262410_41262482_41263484
transcript_26410.nic	chr13	-	1164	5	ISM	ENSG00000120662.16	ENST00000379480.9	2184	10	-4	35913	-3	0	5prime_fragment	FALSE	canonical	3	22	junction_4	34.3320185832409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGCTAATGTGTTTG	-10	True	NA	1	True	TATAAA	-25	NA	41263580	41252281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_26411.known	chr13	+	4285	20	FSM	ENSG00000172766.19	ENST00000379406.8	4285	20	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_13	12.3045382704863	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	1	True	NA	12	True	AATAAA	-18	NA	41311266	41377030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
transcript_26414.nic	chr13	+	2168	15	ISM	ENSG00000172766.19	ENST00000379406.8	4285	20	-38	7826	-38	0	5prime_fragment	FALSE	canonical	3	106	junction_13	10.9068411409294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAGAAAAAAAGAGATG	-37	True	NA	102	True	AAGAAA	-35	NA	41311228	41369204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089
transcript_26416.known	chr13	+	1751	11	FSM	ENSG00000172766.19	ENST00000403412.7	1751	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	8.88594395660922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTGTCTGTGTAA	14	True	NA	4	True	AATAAA	-22	NA	41311279	41358718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303
transcript_26418.known	chr13	-	7174	45	FSM	ENSG00000102763.18	ENST00000379310.8	7174	45	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_18	11.1772671817798	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTACTACCTGGTGAGT	-9	True	NA	-11	True	AATAAA	-26	NA	41961109	41566834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_41568306_41570467_41570707_41575739_41575839_41587511_41587671_41590639_41590766_41605167_41605277_41611575_41611733_41614975_41615085_41670945_41671148_41675214_41675297_41685046_41685243_41689353_41689509_41690165_41690276_41691319_41691446_41691873_41691939_41692861_41692973_41699070_41699271_41701391_41701531_41703302_41703412_41719590_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
transcript_2642.known	chr1	-	1883	8	FSM	ENSG00000158315.11	ENST00000372990.6	1883	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.55550625999976	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTCCTGATAATCA	-14	True	NA	NA	False	AATAAA	-16	NA	38941830	38885806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_38886684_38887962_38888025_38893163_38893225_38895968_38896070_38911321_38911435_38915561_38915711_38918966_38919338_38941681
transcript_26420.known	chr13	+	9915	13	FSM	ENSG00000023516.9	ENST00000025301.4	9915	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	8.59586463881842	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTTGGTTTTCATTC	-16	True	NA	9	True	AATAAA	-12	NA	42272151	42323261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_42272229_42285985_42286036_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362_42303864_42308453_42308610_42313046_42313131_42313893_42313941_42317527_42317689_42319087
transcript_26421.known	chr13	+	2201	5	FSM	ENSG00000120659.15	ENST00000398795.7	2201	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	12.2065556157337	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	0	True	NA	12	True	AATAAA	-18	NA	42574151	42608013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_42574523_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_26422.nnic	chr13	+	1997	5	NNC	ENSG00000120659.15	novel	1520	7	NA	NA	371	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	30.7764114217366	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	523	False	NA	12	True	AATAAA	-18	NA	42574674	42608013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_42574842_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_26428.nnic	chr13	-	1500	5	NNC	ENSG00000229546.1	novel	227	2	NA	NA	-29925	1250	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	8.67107259801231	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGACCTGGTCTTAATC	3308	False	NA	-6	True	ATTAAA	-17	NA	42872812	42841163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_42842100_42842413_42842552_42842798_42842892_42862087_42862166_42872557
transcript_2643.known	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2739	junction_1	54.4902514216993	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	-1	True	NA	50	True	ATTAAA	-19	NA	38991275	39006059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
transcript_26430.known	chr13	-	3160	13	FSM	ENSG00000133106.15	ENST00000313640.11	3160	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	80.3580096955009	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTTCCTTTGTGGTT	11	True	NA	-2	True	AATAAA	-41	NA	42992230	42886387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_42888503_42889210_42889243_42895008_42895109_42900309_42900384_42917540_42917625_42919299_42919333_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_26431.nic	chr13	-	1730	12	NIC	ENSG00000133106.15	novel	3160	13	NA	NA	-160	508	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	65.1178207444966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGGTCATTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	42992431	42887985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_42888503_42889210_42889243_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_26432.known	chr13	-	957	12	FSM	ENSG00000133106.15	ENST00000398762.7	957	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	69.3200744898094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATTGACTCCTATCT	76	False	NA	NA	False	NA	NA	NA	42992165	42888493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42919299_42919333_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_26433.known	chr13	-	3106	11	FSM	ENSG00000133106.15	ENST00000313624.12	3106	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	23.7705700394416	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTTCCTTTGTGGTT	0	True	NA	-2	True	AATAAA	-41	NA	42992241	42886387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_26436.nic	chr13	-	1556	10	NIC	ENSG00000133106.15	novel	3106	11	NA	NA	-77	508	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	66.4637653068605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGGTCATTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	42992348	42887985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42991977
transcript_26438.nic	chr13	-	884	8	ISM	ENSG00000133106.15	ENST00000313624.12	3106	11	-92	31178	-62	1738	5prime_fragment	FALSE	canonical	3	159	junction_3	22.6760684783023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGGATGAACAACATC	NA	False	NA	-20	True	AAGAAA	-17	NA	42992333	42917565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_26439.nic	chr13	-	482	4	ISM	ENSG00000133106.15	ENST00000398762.7	957	12	-78	75573	-2	-765	5prime_fragment	FALSE	canonical	3	200	junction_3	9.89949493661167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGAATTCATCTCTTTT	-2	True	NA	NA	False	AATACA	-8	NA	42992243	42964066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_42964140_42969093_42969178_42970611_42970671_42991977
transcript_26444.nnic	chr13	+	1069	8	NNC	ENSG00000120675.6	novel	924	4	NA	NA	31821	-6805	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	295.731883534352	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTTATTATCTTTTA	-3	True	NA	27	True	AATAAA	-13	NA	43055406	43107408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_43055544_43059393_43059715_43062189_43062296_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
transcript_26456.known	chr13	+	7459	6	FSM	ENSG00000120675.6	ENST00000379221.4	7459	6	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	86.1059812092052	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACTCAATTTTTCTGT	-23	True	NA	NA	False	AATAAA	-22	NA	43023585	43114213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
transcript_26462.nnic	chr13	+	911	6	NNC	ENSG00000120675.6	novel	924	4	NA	NA	31821	-6805	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	318.731485736819	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTTATTATCTTTTA	-3	True	NA	27	True	AATAAA	-13	NA	43055406	43107408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_43055544_43059393_43059715_43068929_43069004_43078611_43078689_43085767_43085839_43107177
transcript_26469.known	chr13	+	924	4	FSM	ENSG00000120675.6	ENST00000474320.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	32.4995726467629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAAAACAGGCAA	59	False	NA	NA	False	AAAACA	-9	NA	43023202	43078877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611
transcript_26473.known	chr13	+	4028	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	6.26276474268531	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	-2	True	NA	7	True	AATAAA	-20	NA	43879903	43893932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
transcript_26474.known	chr13	-	2059	7	FSM	ENSG00000151773.13	ENST00000444614.8	2059	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.43471156521669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCGTATTCTGTGACTA	-4	True	NA	NA	False	AATAAA	-24	NA	43879740	43836351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_43837430_43858780_43858898_43859671_43860071_43868693_43868804_43869330_43869490_43874841_43874928_43879630
transcript_26478.nic	chr13	-	2132	3	NIC	ENSG00000151773.13	novel	2059	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	10	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTTTGACTAATTTGA	-20	True	NA	2	True	AATAAA	-17	NA	43879756	43858150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_43860071_43874841_43874928_43879630
transcript_2648.known	chr1	+	544	3	FSM	ENSG00000168653.11	ENST00000372967.3	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	1745.5	2314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGACTTTCTTTTCTTTT	-18	True	NA	50	True	AATAAA	-38	NA	39026317	39034636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39026399_39028722_39028941_39034391
transcript_26480.nic	chr13	-	468	3	NIC	ENSG00000151773.13	novel	2059	7	NA	NA	-16	-1664	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGGGGAAGTAGAGAGC	-20	True	NA	NA	False	AATAAA	-15	NA	43879756	43859814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_43860071_43874841_43874928_43879630
transcript_26481.known	chr13	+	499	4	FSM	ENSG00000227258.7	ENST00000444663.6	706	4	203	4	125	-4	multi-exon	FALSE	canonical	2	6	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTTGCAGTTGCCTATT	215	False	NA	4	True	NA	NA	NA	44142545	44148030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44147937
transcript_26482.known	chr13	+	1793	3	FSM	ENSG00000227258.7	ENST00000654757.1	1793	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATAGAATGGATCACAAA	-17	True	NA	-16	True	NA	NA	NA	44142313	44148010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_44142697_44143556_44143738_44146781
transcript_26483.known	chr13	-	2129	3	FSM	ENSG00000237361.4	ENST00000660135.2	2363	3	234	0	233	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGATGGAGTTTCATTCT	9173	False	NA	NA	False	NA	NA	NA	44405720	44401527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_44403330_44404391_44404612_44405613
transcript_26484.known	chr13	-	3135	3	FSM	ENSG00000102804.15	ENST00000261489.6	3135	3	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	196	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	5	True	NA	NA	False	ATTAAA	-16	NA	44436845	44432142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_44434884_44436043_44436096_44436503
transcript_26485.known	chr13	-	2872	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	518.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	-20	True	NA	NA	False	ATTAAA	-16	NA	44437254	44432142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_44434884_44436043_44436096_44437175
transcript_26489.known	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	16.6533279957291	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-11	True	NA	-1	True	ATTAAA	-15	NA	44989471	44939248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
transcript_2649.known	chr1	+	495	3	FSM	ENSG00000168653.11	ENST00000372969.8	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	3429	junction_1	1351.5	3207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTATTTTCTCTTGG	14	True	NA	29	True	AATAAA	-17	NA	39026349	39034615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39026403_39028722_39028941_39034391
transcript_26491.nnic	chr13	+	3526	10	NNC	ENSG00000133114.18	novel	4294	10	NA	NA	2	-1324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	34.7513211401762	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGAGAAAAGCCCTG	-24	True	NA	NA	False	AAAAAG	-6	NA	44989530	45032278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45030425_45031085
transcript_26494.nic	chr13	+	1625	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-89	3886	2	-589	5prime_fragment	FALSE	canonical	3	46	junction_8	19.0718214914045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGTATGGGGTTTTGC	-24	True	NA	NA	False	AATACA	-15	NA	44989530	45029716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_26495.nic	chr13	+	2196	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-89	3315	2	-18	5prime_fragment	FALSE	canonical	3	46	junction_8	19.0718214914045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAATTCTATAAGTTATA	-24	True	NA	8	True	AATAAA	-1	NA	44989530	45030287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_26496.nic	chr13	+	1520	9	NIC	ENSG00000133114.18	novel	4294	10	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	31.6889176211495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTAGTATTTATTTT	-24	True	NA	15	True	AATAAA	-18	NA	44989530	45033608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45033235
transcript_26499.known	chr13	+	3410	8	FSM	ENSG00000133114.18	ENST00000361121.6	3410	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.0905889706014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	9	True	NA	26	True	AATAAA	-19	NA	44989563	45030305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_44989743_45004310_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_2650.known	chr1	-	3142	16	FSM	ENSG00000090621.15	ENST00000372858.8	3142	16	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_6	99.7859041481645	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-1	True	NA	-10	True	AATAAA	-21	NA	39576790	39560815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_26508.known	chr13	+	899	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTCATGCCTTTCTTT	NA	False	NA	7	True	AATAAA	-21	NA	44989528	44990427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_44989500_44990400
transcript_26512.known	chr13	+	2228	8	FSM	ENSG00000188342.12	ENST00000340473.8	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	21.4998813475606	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCCATTCCCCACTCC	5	True	NA	9	True	AATAAA	-17	NA	45120509	45284893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
transcript_26515.nic	chr13	+	701	7	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-49	17641	-49	-81	5prime_fragment	FALSE	canonical	3	511	junction_2	18.5868830690415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAGACGGAAAGCGAG	-44	True	NA	18	True	NA	NA	NA	45120460	45267252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232
transcript_26516.nic	chr13	+	681	6	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-49	31923	-49	-14363	5prime_fragment	FALSE	canonical	3	511	junction_2	19.1415777824086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTTCTGCTTGTCTC	-44	True	NA	NA	False	AATACA	-3	NA	45120460	45252970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870
transcript_2652.known	chr1	-	2082	16	FSM	ENSG00000090621.15	ENST00000678625.1	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	150.36039667708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	22	True	NA	18	True	NA	NA	NA	39575786	39560856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_26522.known	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	1505.11843387821	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	1	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
transcript_26525.known	chr13	-	764	6	FSM	ENSG00000133112.17	ENST00000379060.8	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1387.9091324723	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGCATTTAAACTC	91	False	NA	6	True	AAGAAA	-25	NA	45341122	45337197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341037
transcript_26527.known	chr13	-	3663	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	4.2889464590264	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGGTTATTTCAGA	-10	True	NA	98	True	AATAAA	-26	NA	45418373	45393315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
transcript_2653.known	chr1	-	3048	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_6	119.398194663441	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	162	False	NA	-10	True	AATAAA	-21	NA	39576744	39560815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_26530.known	chr13	+	4555	23	FSM	ENSG00000136152.15	ENST00000349995.10	4555	23	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	10.8917475773751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTCAGACTCACATGC	-8	True	NA	95	True	ATTAAA	-17	NA	45464938	45536701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_45465211_45476200_45476348_45479004_45479067_45480124_45480291_45481229_45481305_45482380_45482474_45483229_45483356_45486494_45486576_45490914_45490959_45491411_45491539_45492158_45492251_45493346_45493487_45496151_45496313_45503243_45503350_45509691_45509817_45511764_45511855_45516142_45516264_45518761_45518851_45518959_45519095_45524975_45525052_45529790_45529919_45530681_45530781_45534701
transcript_26531.known	chr13	+	531	2	FSM	ENSG00000136152.15	ENST00000617325.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCCATGGGGGTCTT	13	False	NA	NA	False	NA	NA	NA	45464897	45465658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_45465211_45465440
transcript_26532.known	chr13	+	255	2	FSM	ENSG00000136152.15	ENST00000476702.1	255	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTCCAGTCTGTTT	59	False	NA	NA	False	AATAAA	-14	NA	45465063	45466624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_45465211_45466516
transcript_26535.nnic	chr13	-	3013	15	NIC	ENSG00000123200.17	novel	6412	17	NA	NA	0	-7484	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	71.3199173600538	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAAAGAAACCAATTAAG	-21	True	NA	NA	False	AAGAAA	-8	NA	46052759	45969659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46051931_46051990_46052697
transcript_26537.known	chr13	-	6412	17	FSM	ENSG00000123200.17	ENST00000282007.7	6412	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_16	47.5840949661754	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGTCTAATTATCTAT	-21	True	NA	NA	False	AATAAA	-25	NA	46052759	45962175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_26539.nic	chr13	-	3257	14	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	15195	-8	-7484	5prime_fragment	FALSE	canonical	3	94	junction_13	40.6648882464304	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAAAGAAACCAATTAAG	5618	False	NA	NA	False	AAGAAA	-8	NA	46052767	45969659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_26543.nic	chr13	-	2543	13	NIC	ENSG00000123200.17	novel	8024	19	NA	NA	18	-13424	combination_of_known_junctions	FALSE	canonical	3	26	junction_12	69.2104279233508	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAGAGAGAGA	10	True	NA	-100	True	AAAAAG	-42	NA	46052728	45975599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46051931_46051990_46052403
transcript_26545.nic	chr13	-	2707	12	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	20952	-8	-13241	5prime_fragment	FALSE	canonical	3	94	junction_11	39.8733532264426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGGATAAAGAACGAGA	5618	False	NA	-70	True	NA	NA	NA	46052767	45975416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_26547.nic	chr13	-	2630	12	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	21029	-8	-13318	5prime_fragment	FALSE	canonical	3	94	junction_11	39.8733532264426	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAGAGAGAGAGGGAG	5618	False	NA	6	True	AAAAAG	-16	NA	46052767	45975493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_26549.nic	chr13	-	2524	12	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	21135	-8	-13424	5prime_fragment	FALSE	canonical	3	94	junction_11	39.8733532264426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAGAGAGAGA	5618	False	NA	-100	True	AAAAAG	-42	NA	46052767	45975599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_2655.known	chr1	-	3016	15	FSM	ENSG00000090621.15	ENST00000372856.7	3016	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	147.494880575288	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	155	False	NA	-10	True	AATAAA	-21	NA	39576751	39560815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_26554.nic	chr13	-	1479	9	NIC	ENSG00000123200.17	novel	795	4	NA	NA	-8	158	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	81.5045052435753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAAATGTGTGTGTTCT	5618	False	NA	NA	False	TATAAA	-14	NA	46052767	46001004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_46001461_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_26555.nic	chr13	-	1241	9	NIC	ENSG00000123200.17	novel	8024	19	NA	NA	18	-2071	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	82.4506481175254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTAAAAGACAGGAT	10	True	NA	NA	False	AATACA	-9	NA	46052728	46003233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46051931_46051990_46052403
transcript_26556.nic	chr13	-	1222	8	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	48769	-8	-2071	5prime_fragment	FALSE	canonical	3	94	junction_7	48.0441973391083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTAAAAGACAGGAT	5618	False	NA	NA	False	AATACA	-9	NA	46052767	46003233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_2656.known	chr1	-	2470	15	FSM	ENSG00000090621.15	ENST00000372862.7	2470	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	156.564389831358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	653	False	NA	-10	True	AATAAA	-21	NA	39576253	39560815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_26567.known	chr13	-	8018	19	FSM	ENSG00000123200.17	ENST00000242848.8	8018	19	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_18	55.4499273619402	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-8	True	NA	-4	True	AATAAA	-18	NA	46052746	45954464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965430_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045514_46052403
transcript_26569.known	chr13	-	3643	16	FSM	ENSG00000136167.15	ENST00000323076.7	3643	16	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_11	5.57215298505783	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTGTCTCTGGATGTTT	-3	True	NA	-9	True	AATAAA	-13	NA	46182177	46125922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46127724_46130813_46130939_46134126_46134251_46142291_46142426_46143289_46143405_46144441_46144521_46146907_46147104_46148351_46148448_46150935_46151079_46152779_46152946_46154804_46154887_46156437_46156571_46158521_46158652_46158825_46158990_46159598_46159687_46182110
transcript_2657.known	chr1	-	1011	7	FSM	ENSG00000090621.15	ENST00000678028.1	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	214.112639099662	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	NA	False	NA	-10	True	AATAAA	-21	NA	39564813	39560815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685
transcript_26570.known	chr13	-	11050	15	FSM	ENSG00000102445.20	ENST00000429979.6	11050	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	5.40974177964614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAAGCTCCCCTGCCTA	-7	True	NA	NA	False	TATAAA	-25	NA	46387252	46334680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46377889_46378006_46387133
transcript_26571.nic	chr13	-	2650	14	NIC	ENSG00000102445.20	novel	11050	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	5.11986501301346	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	-6	True	NA	-9	True	NA	NA	NA	46387251	46342963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46387133
transcript_26572.known	chr13	-	3322	14	FSM	ENSG00000102445.20	ENST00000378781.7	3322	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.52038649390784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	2671	False	NA	NA	False	AATAAA	-19	NA	46387500	46341999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46377889_46378006_46387133
transcript_26573.known	chr13	-	3206	13	FSM	ENSG00000102445.20	ENST00000378797.6	3206	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	6.43072054024016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	2671	False	NA	NA	False	AATAAA	-19	NA	46387500	46341999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46387133
transcript_26575.known	chr13	+	4710	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_18	6.98521366004958	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	-5	True	NA	7	True	ATTAAA	-18	NA	46553167	46753040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
transcript_26577.known	chr13	-	1079	11	FSM	ENSG00000139684.15	ENST00000378697.5	1079	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	197.997499984217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAACATTGGATTTTAT	19	True	NA	-97	True	TATAAA	-44	NA	46797133	46771334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46790596_46790662_46791345_46791421_46793396_46793445_46797104
transcript_26579.known	chr13	-	1121	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	143.297239210782	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGATTTTAAAAGTTAT	-9	True	NA	-18	True	AATAAA	-14	NA	46797161	46771255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_26582.nic	chr13	-	1197	10	NIC	ENSG00000139684.15	novel	3090	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	143.297239210782	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACATGATTTACTCAACT	12	False	46797180	NA	False	AATAAA	-37	NA	46797168	46775382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_46775693_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_26593.known	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_6	74.1012820401914	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	10	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_26595.nic	chr13	-	1974	10	NIC	ENSG00000136143.16	novel	2111	11	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_9	288.957940465433	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	0	True	NA	-14	True	AATAAA	-16	NA	48001317	47942655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_48001179
transcript_26602.known	chr13	-	1079	6	FSM	ENSG00000136143.16	ENST00000644338.1	1079	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	366.48165029098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGTCCTTCTTT	4	True	NA	-77	True	AATAGA	-34	NA	48001279	47971680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47972087_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_26603.known	chr13	-	1445	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_2	34.2669260690571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGCAACTTTTAAT	10	True	NA	NA	False	ATTAAA	-22	NA	48001273	47987633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
transcript_26604.known	chr13	-	2201	12	FSM	ENSG00000136143.16	ENST00000643023.1	2201	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	359.353275843569	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTGGGTTCATGGCT	3395	False	NA	-19	True	AATAAA	-11	NA	48001305	47942660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47965577_47965641_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_26606.known	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_2	34.5	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	-5	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_48037905_48040919_48041117_48045659
transcript_26608.nic	chr13	+	790	2	ISM	ENSG00000136159.4	ENST00000258662.3	1938	3	-28	5719	-28	-5719	5prime_fragment	FALSE	canonical	3	645	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTAGTCTGAAGTATT	-33	True	NA	8	True	AATAAA	-17	NA	48037697	48041502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_48037905_48040919
transcript_26609.nic	chr13	-	1010	8	NIC	ENSG00000136146.15	novel	911	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	342.368520868424	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCTGTTTTGTTAG	-8	True	NA	-5	True	AATAAA	-16	NA	48095120	48053322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_48053492_48077152_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
transcript_26613.known	chr13	-	911	8	FSM	ENSG00000136146.15	ENST00000417167.2	911	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	463.561941351302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTCAAGCAGTAGTAGT	44	False	NA	-71	True	AATAAA	-35	NA	48095068	48077170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48093547_48093688_48094953
transcript_26618.known	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_6	57.8983784075359	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	8	True	NA	NA	False	NA	NA	NA	48095104	48075723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
transcript_26619.known	chr13	-	931	7	FSM	ENSG00000136146.15	ENST00000378586.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_6	315.445936554727	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATAGTTTTAGTTTTA	NA	False	NA	NA	False	ATTAAA	-35	NA	48095131	48076967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
transcript_2663.known	chr1	+	1198	11	FSM	ENSG00000084072.17	ENST00000372830.5	1198	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	300.769828939008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	18	False	NA	10	True	AATAAA	-18	NA	39738900	39763914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39762516_39762652_39763688
transcript_26633.known	chr13	-	460	3	FSM	ENSG00000136146.15	ENST00000495013.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCTGTTTTGTTAG	NA	False	NA	-5	True	AATAAA	-16	NA	48079975	48053322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48053492_48077152_48077312_48079843
transcript_26635.known	chr13	-	3075	15	FSM	ENSG00000136161.13	ENST00000344532.8	3075	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	8.40917865872082	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	1	True	NA	NA	False	AATAAA	-24	NA	48533080	48488962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48522307_48522404_48524658_48524758_48533027
transcript_26638.known	chr13	-	2984	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	5.7265511810995	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	2639	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
transcript_26640.known	chr13	+	6328	26	FSM	ENSG00000102531.16	ENST00000541916.5	6328	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	29.6911030445149	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTGATTTTGTGCAA	-25	True	NA	13	True	AATAAA	-18	NA	48976608	49209778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_48976918_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_26642.known	chr13	+	3386	10	FSM	ENSG00000102543.14	ENST00000251108.10	3386	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	21.7704069159019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGCCTCAGAAGGTG	-3	True	NA	3	True	AATAAA	-18	NA	49247924	49293485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489_49268060_49274290_49274341_49278349_49278520_49280508_49280699_49286221_49286283_49291683
transcript_26645.known	chr13	+	688	6	FSM	ENSG00000102543.14	ENST00000496061.5	688	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	23.3015020975044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATAAGTTTGCTTACG	13	True	NA	NA	False	NA	NA	NA	49247940	49267525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49265878_49266004_49267489
transcript_26646.known	chr13	+	644	6	FSM	ENSG00000102543.14	ENST00000484126.5	644	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	22.3338308402298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTGTAGAGGAGACC	49	False	NA	NA	False	NA	NA	NA	49247976	49267657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49265878_49266004_49267489
transcript_26647.nic	chr13	+	1328	6	NIC	ENSG00000102543.14	novel	688	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	24.6625221743438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	-17	True	NA	9	True	AATAAA	-17	NA	49247910	49267785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_49248470_49248870_49248966_49255838_49255914_49259345_49259524_49265878_49266004_49267489
transcript_26648.nic	chr13	+	853	5	ISM	ENSG00000102543.14	ENST00000251108.10	3386	10	-14	25700	-14	0	5prime_fragment	FALSE	canonical	3	40	junction_1	6.81909084849293	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	-17	True	NA	9	True	AATAAA	-17	NA	49247910	49267785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489
transcript_26649.known	chr13	+	677	5	FSM	ENSG00000102543.14	ENST00000466868.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	18.7416648139913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	19	True	NA	9	True	AATAAA	-17	NA	49247946	49267785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49267489
transcript_2665.known	chr1	+	4339	10	FSM	ENSG00000084072.17	ENST00000324379.10	4339	10	0	0	0	0	multi-exon	TRUE	canonical	3	622	junction_1	65.9951363714885	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTTTATTTGACTTG	-1	True	NA	NA	False	AATAAA	-17	NA	39738881	39756769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_26651.nic	chr13	+	1203	5	NIC	ENSG00000102543.14	novel	677	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	19.9812412026881	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	-17	True	NA	9	True	AATAAA	-17	NA	49247910	49267785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_49248470_49248870_49248966_49255838_49255914_49259345_49259524_49267489
transcript_26654.known	chr13	-	3502	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	4.62168800331654	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTTGGTTTCATTC	-24	True	NA	-21	True	AATAAA	-13	NA	49444064	49308649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
transcript_26657.known	chr13	+	6139	15	FSM	ENSG00000136169.17	ENST00000354234.8	6139	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	15.9303330223847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGATCGGCTAATTCTG	2	True	NA	9	True	AATAAA	-22	NA	49444373	49495003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49464020_49464057_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_2666.known	chr1	+	1079	10	FSM	ENSG00000084072.17	ENST00000356511.6	1079	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	238.685494808752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	2	True	NA	10	True	AATAAA	-18	NA	39738884	39763914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39763688
transcript_26661.nic	chr13	+	3086	14	FSM	ENSG00000136169.17	ENST00000611815.2	6203	14	-40	3157	-40	-3156	multi-exon	FALSE	canonical	3	24	junction_1	8.76653129840516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGTAACTAACGCCT	-1	True	NA	7	True	AATAAA	-19	NA	49444233	49491846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_26662.nic	chr13	+	3175	14	FSM	ENSG00000136169.17	ENST00000611815.2	6203	14	-40	3068	-40	-3067	multi-exon	FALSE	canonical	3	24	junction_1	8.76653129840516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCCTCCGTTTTCCTTTG	-1	True	NA	29	True	ATTAAA	-36	NA	49444233	49491935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_26663.nic	chr13	+	3397	14	FSM	ENSG00000136169.17	ENST00000611815.2	6203	14	-40	2846	-40	-2845	multi-exon	FALSE	canonical	3	24	junction_1	8.76653129840516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCATAACAGAACTCAGCT	-1	True	NA	NA	False	NA	NA	NA	49444233	49492157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_26674.known	chr13	-	4008	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	27.0102861065105	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	0	True	NA	-5	True	AATAAA	-21	NA	49585558	49531945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
transcript_2668.known	chr1	+	1213	10	FSM	ENSG00000084072.17	ENST00000475350.5	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	278.763938366018	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	25	False	NA	30	True	AATAAA	-30	NA	39738907	39753716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
transcript_26680.known	chr13	+	3552	2	FSM	ENSG00000152213.4	ENST00000282026.2	3552	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGCTCATTTCCTTGC	-5	True	NA	NA	False	NA	NA	NA	49628506	49633872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49628616_49630429
transcript_26681.known	chr13	-	977	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	0	0	0	multi-exon	TRUE	canonical	3	1016	junction_2	71.1071179434395	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCAGTGTTATATTAAT	-17	True	NA	30	True	AGTAAA	-17	NA	49691486	49660673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
transcript_26682.known	chr13	-	810	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	510.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	31	True	NA	-19	True	AATAAA	-19	NA	49691438	49660722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49661209_49663056_49663196_49691253
transcript_26683.known	chr13	-	579	2	FSM	ENSG00000123179.14	ENST00000378270.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTTTAAGGCGACCAG	12	True	NA	-130	True	NA	NA	NA	49691457	49660833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49661209_49691253
transcript_26684.known	chr13	-	4222	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	27.8340506394596	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	1	True	NA	-48	True	AATAAA	-27	NA	49792682	49699319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_26695.known	chr13	-	3057	5	FSM	ENSG00000123178.15	ENST00000361840.8	3057	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	8.25757228245687	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTATCTACCTCTTTT	-14	True	NA	-7	True	ATTAAA	-24	NA	49936340	49912701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49931017_49931135_49936129
transcript_26702.known	chr13	-	3086	4	FSM	ENSG00000123178.15	ENST00000378195.6	3086	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	51.6161042914149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGATGTTATCTACCTC	9	True	NA	-11	True	ATTAAA	-20	NA	49936490	49912705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49936129
transcript_26707.known	chr13	-	705	6	FSM	ENSG00000231607.14	ENST00000443587.6	1734	6	19	1010	16	209	multi-exon	FALSE	canonical	0	0	junction_3	20.0897984061563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACCCTTTTAATGAAG	28	True	NA	NA	False	NA	NA	NA	50081972	50044514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50070581_50070642_50075558_50075654_50081822
transcript_26709.known	chr13	-	1737	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	12	57	0	13	multi-exon	FALSE	canonical	3	35	junction_2	6.57647321898295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTACTGTTTAGGTA	NA	False	NA	NA	False	ATTAAA	-37	NA	50082041	50043491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_26716.known	chr13	-	855	4	FSM	ENSG00000231607.14	ENST00000449579.2	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	6.64997911442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCACATAATGGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	50082041	50049188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_50049663_50068096_50068164_50075558_50075654_50081822
transcript_26720.known	chr13	+	2607	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	59	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	245	False	NA	NA	False	NA	NA	NA	49997018	50014331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49997132_49997666_49997764_50011934
transcript_26721.known	chr13	+	478	3	FSM	ENSG00000204977.10	ENST00000478111.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	78.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATTTTTCTTGTTTCA	245	False	NA	NA	False	GATAAA	-35	NA	49997018	50020481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49997132_49997666_49997764_50020213
transcript_26722.known	chr13	+	1489	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	104	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGTATGCAGTTTT	0	True	NA	9	True	TATAAA	-14	NA	49997058	50013168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_49997217_49997666_49997764_50011934
transcript_26725.known	chr13	+	2957	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	2	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	1870	False	NA	15	True	AATAAA	-21	NA	50082168	50107218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50082558_50083141_50083195_50104703
transcript_26726.known	chr13	+	2888	2	FSM	ENSG00000176124.15	ENST00000655550.1	2888	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTTCACTATTAACT	1870	False	NA	-1	True	AATAAA	-5	NA	50082168	50107202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50082558_50104703
transcript_26729.known	chr13	+	1513	11	FSM	ENSG00000136104.21	ENST00000336617.8	1513	11	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_10	40.5587228595773	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTATGACTGCTTT	18	True	NA	5	True	AATAAA	-17	NA	50909790	50956762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_26741.known	chr13	-	800	5	FSM	ENSG00000226792.8	ENST00000433280.6	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	37.3589012151053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTGGTAGAGTTGAAA	962	False	NA	NA	False	NA	NA	NA	51172388	51084080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51113192_51113223_51172252
transcript_26746.known	chr13	-	826	4	FSM	ENSG00000226792.8	ENST00000569306.1	826	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.3245605355165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTCCCTGAGAAGC	1128	False	NA	NA	False	NA	NA	NA	51172222	51084123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51171987
transcript_26747.nnic	chr13	-	3054	4	NIC	ENSG00000226792.8	novel	3075	4	NA	NA	-322	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	31.1804782231162	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGACAGATTCTTT	640	False	NA	-1	True	AATAAA	-20	NA	51172710	51082118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_51084326_51085318_51085560_51087927_51088076_51172252
transcript_2675.known	chr1	+	2564	9	FSM	ENSG00000084072.17	ENST00000482751.5	2564	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	224.641902536014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	7	True	NA	30	True	AATAAA	-30	NA	39738889	39753716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_26750.nnic	chr13	+	2032	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	32	351	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTAGTT	24	False	NA	11	True	ATTAAA	-18	NA	51170061	51176074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51172316_51172419_51174545
transcript_26756.nnic	chr13	+	2115	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	13.5	348	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTAGTT	-2	True	NA	11	True	ATTAAA	-18	NA	51170035	51176074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51172259_51172419_51174545
transcript_26758.nnic	chr13	+	2390	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	0	545	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	43	False	NA	14	True	ATTAAA	-21	NA	51169604	51176077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51174545
transcript_26760.nnic	chr13	+	530	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	151	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	24	False	NA	14	True	ATTAAA	-21	NA	51170061	51176077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_51170463_51175948
transcript_26766.nnic	chr13	+	1186	3	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-10115	0	multi-exon	FALSE	canonical	3	87	junction_2	32	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	25	False	NA	5	True	AATAAA	-14	NA	51170062	51180967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr13_+_51170463_51175948_51176044_51180276
transcript_26767.known	chr13	+	918	3	FSM	ENSG00000236778.8	ENST00000594604.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCCATGTTCTTTTA	801	False	NA	NA	False	AATAAA	-34	NA	51454163	51469423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_51454330_51468267_51468368_51468771
transcript_26768.known	chr13	+	906	2	FSM	ENSG00000236778.8	ENST00000598905.1	906	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCAAGGTTTCAGCTT	-22	True	NA	NA	False	AATAAA	-30	NA	51453340	51454830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_51453419_51454002
transcript_2677.known	chr1	+	927	8	FSM	ENSG00000084072.17	ENST00000470213.5	927	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	269.552917829142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTATTCTGCCACAAAG	18	False	NA	NA	False	NA	NA	NA	39738900	39753266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39748902_39749089_39752909
transcript_26772.known	chr13	-	1199	10	FSM	ENSG00000102796.12	ENST00000682342.1	1199	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	24.5195814920078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	0	True	NA	-12	True	AATAAA	-32	NA	51804162	51767994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_26774.known	chr13	-	1119	9	FSM	ENSG00000102796.12	ENST00000444610.8	1119	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	27.5836795043736	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	-1	True	NA	-10	True	AATAAA	-34	NA	51804163	51767992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_26776.nnic	chr13	-	1502	9	NNC	ENSG00000102796.12	novel	1324	8	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.0711330726568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACATGCCTCATGATCT	NA	False	NA	-4	True	ATTAAA	-22	NA	51804183	51770778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_51771501_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_26783.known	chr13	-	1324	8	FSM	ENSG00000102796.12	ENST00000280056.6	1324	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	35.9262282678132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTACATGCCTCAT	20	True	NA	-9	True	ATTAAA	-17	NA	51804098	51770783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_2679.known	chr1	-	1826	1	FSM	ENSG00000198754.5	ENST00000327582.5	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCCTCACTGTGTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	39771348	39769522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39769500_39771300
transcript_268.nic	chr1	-	2617	16	NIC	ENSG00000127054.22	novel	2114	17	NA	NA	-20	0	intron_retention	FALSE	canonical	3	349	junction_8	41.4430801086127	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTACTTGGTACTCTCTTC	NA	False	NA	-17	True	AGTAAA	-13	NA	1324707	1311601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_26800.nnic	chr13	-	2129	15	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	89	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_14	43.4816991763812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	84	False	NA	-7	True	ATTAAA	-16	NA	52159772	52132646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52159542
transcript_26801.nnic	chr13	-	1921	14	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	51.3848456927128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-22	True	NA	-7	True	ATTAAA	-16	NA	52159614	52132646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52159542
transcript_26805.known	chr13	+	6504	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	77.8279352160906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	8	True	NA	-29	True	NA	NA	NA	52012410	52033540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
transcript_26806.known	chr13	+	6510	4	FSM	ENSG00000253710.5	ENST00000521508.2	6510	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	5.79271573232759	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGCTGTCAGGTTTAA	-5	True	NA	31	True	AATAAA	-27	NA	52012397	52033600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52024005_52024938_52028318
transcript_26809.known	chr13	+	1004	4	FSM	ENSG00000253710.5	ENST00000650049.2	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	79.9874990232849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTTAGAAAACAGACAAAA	10	True	NA	71	True	NA	NA	NA	52012412	52028689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52024585_52024938_52028318
transcript_2681.known	chr1	-	5051	11	FSM	ENSG00000043514.17	ENST00000316891.10	5051	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	49.2301736742823	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAGACTCAACAATAC	-4	True	NA	NA	False	NA	NA	NA	39883504	39838109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_26812.nic	chr13	+	1196	3	ISM	ENSG00000253710.5	ENST00000649340.2	5097	4	-30	7315	-23	-3814	5prime_fragment	FALSE	canonical	3	166	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTGTCTGAAGCAA	653	False	NA	7	True	AATAAA	-22	NA	52012367	52024875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_52012463_52018912_52019144_52024005
transcript_26813.known	chr13	+	5510	3	FSM	ENSG00000253710.5	ENST00000679544.1	5510	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	80	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGCTCCATATGCCAA	-5	True	NA	-37	True	NA	NA	NA	52012397	52033532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52028318
transcript_26816.known	chr13	+	6219	3	FSM	ENSG00000253710.5	ENST00000681053.1	6219	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	-5	True	NA	-29	True	NA	NA	NA	52012397	52033540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52024005_52024938_52028318
transcript_26818.known	chr13	+	1404	2	FSM	ENSG00000253710.5	ENST00000523764.1	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGCCAGAATGATG	-5	True	NA	NA	False	AAGAAA	-10	NA	52012397	52029657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52028318
transcript_26824.known	chr13	+	1983	2	FSM	ENSG00000253710.5	ENST00000616513.1	1983	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTTGGGTACGTCTTT	8	True	NA	18	True	ATTAAA	-14	NA	52012410	52017713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52015782
transcript_26826.known	chr13	-	2128	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	25.9883734688332	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-5	True	NA	-7	True	ATTAAA	-16	NA	52159597	52132646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_26827.known	chr13	+	1520	3	FSM	ENSG00000253710.5	ENST00000681145.1	1520	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCACAAAGTCGTGAAGAA	8	True	NA	NA	False	AGTAAA	-4	NA	52012410	52029554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019148_52028321
transcript_26828.known	chr13	+	5097	4	FSM	ENSG00000253710.5	ENST00000649340.2	5097	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.4578854208665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCTGGGCAATAAGCAAA	-5	True	NA	NA	False	NA	NA	NA	52012397	52032190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52012463_52018912_52019144_52024005_52024938_52028321
transcript_26829.known	chr13	-	4425	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_8	28.2641806059444	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTGAGCAGTT	-2	True	NA	-4	True	AATAAA	-24	NA	52450634	52412605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_26835.nic	chr13	-	551	6	ISM	ENSG00000136100.14	ENST00000378060.9	4425	14	-12	21085	-12	1147	5prime_fragment	FALSE	canonical	3	210	junction_4	23.1222836242444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAACTGACAAAAAC	-14	True	NA	NA	False	AAGAAA	-4	NA	52450646	52433690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_26836.known	chr13	-	557	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGTGTTTGTGTGGTT	6	True	NA	-1	True	GATAAA	-18	NA	52455331	52454774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52454800_52455300
transcript_26839.known	chr13	+	3614	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_2	70.2316479587372	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	3	True	NA	20	True	AATAAA	-18	NA	52455477	52476627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_26842.known	chr13	+	3395	9	FSM	ENSG00000136108.15	ENST00000490903.5	3395	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	219.338458495085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	409	False	NA	7	True	ATTAAA	-15	NA	52455971	52476349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52456180_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_26847.known	chr13	+	1972	6	FSM	ENSG00000136108.15	ENST00000378034.7	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_2	59.3518323221786	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTCTCTTGGTTTTGT	-36	True	NA	10	True	ATTAAA	-19	NA	52455438	52465843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294
transcript_2685.nic	chr1	-	1992	10	NIC	ENSG00000043514.17	novel	5051	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	60.1315430463563	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	NA	False	NA	-27	True	AATAAA	-17	NA	39883532	39841050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
transcript_26852.known	chr13	+	537	4	FSM	ENSG00000136108.15	ENST00000480747.1	537	4	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	279.457013192051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCATTTCACCTTAAAAA	14	True	NA	NA	False	NA	NA	NA	52456007	52461258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52456180_52456522_52456608_52460895_52460975_52461057
transcript_26858.nnic	chr13	+	740	5	NIC	ENSG00000244471.6	novel	865	4	NA	NA	107	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	9.67923034130297	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52570259	52587095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52586809
transcript_26865.nic	chr13	+	2259	6	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-41	23	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	36.5644636224846	17227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGGTGGAATCCGTA	0	True	NA	2	True	AATAAA	-20	NA	52617483	52643796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642368
transcript_26866.known	chr13	+	2158	6	FSM	ENSG00000273784.5	ENST00000683187.1	2158	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	23.3957261054236	17040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	10	True	NA	-21	True	NA	NA	NA	52617524	52643773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_26869.nic	chr13	+	2125	5	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	40.7883255356235	17017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	1	True	NA	-21	True	NA	NA	NA	52617484	52643773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52637304_52637447_52642405
transcript_26870.nnic	chr13	+	2098	4	NNC	ENSG00000273784.5	novel	2158	6	NA	NA	-96	-10519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.6118565998942	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGACTCTTTTTAA	NA	False	NA	NA	False	ATTAAA	-28	NA	52617428	52631982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_52617683_52621988_52622265_52627437_52627579_52630555
transcript_26872.known	chr13	-	975	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTCTTGGTCATAA	36	False	NA	79	True	AATAAA	-16	NA	52652279	52651304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52651300_52652300
transcript_26876.known	chr13	+	1217	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	164.078023004716	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	-20	True	NA	33	True	AATAAA	-33	NA	52652838	52687872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_2688.known	chr1	-	2034	10	FSM	ENSG00000043514.17	ENST00000372818.5	2034	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.7127490139676	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-6	True	NA	-27	True	AATAAA	-17	NA	39883506	39841050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_26881.known	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	63.7640507391639	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	-23	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_26887.nic	chr13	+	1027	12	ISM	ENSG00000165416.15	ENST00000310528.9	14161	13	-153	20865	-26	-7828	5prime_fragment	FALSE	canonical	3	438	junction_5	64.5346982074548	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAGAATGAAAA	9352	False	NA	NA	False	GATAAA	-19	NA	52652682	52680044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973
transcript_2689.known	chr1	-	1851	9	FSM	ENSG00000043514.17	ENST00000441669.6	1851	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	66.2382064974588	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	9	True	NA	-27	True	AATAAA	-17	NA	39883491	39841050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848092_39850118_39850262_39852730_39852877_39883317
transcript_26896.known	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	400.800206531328	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-13	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_26898.nnic	chr13	-	1695	7	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	-228	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_2	418.834493963109	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	NA	False	NA	-10	True	AATAAA	-27	NA	52740048	52703263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_52703811_52708535_52708715_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_26902.nnic	chr13	-	1569	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	-228	0	combination_of_known_splicesites	FALSE	canonical	3	145	junction_3	445.115535563521	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	NA	False	NA	-10	True	AATAAA	-27	NA	52740048	52703263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52703811_52708535_52708703_52712715_52712870_52733218_52733360_52739030_52739172_52739629
transcript_26906.nnic	chr13	-	1516	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	-228	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	486.189510376355	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	NA	False	NA	-10	True	AATAAA	-27	NA	52740048	52703263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_52703811_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_26911.nnic	chr13	-	1016	4	NNC	ENSG00000136110.13	novel	1444	7	NA	NA	-228	-17104	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	615.484813423983	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTGAAAGAATAAACTG	NA	False	NA	NA	False	AATAAA	-14	NA	52740048	52729819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_52730135_52733218_52733360_52739030_52739172_52739629
transcript_2692.nnic	chr1	-	1583	7	NIC	ENSG00000043514.17	novel	1156	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_6	58.1081367413855	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-6	True	NA	-27	True	AATAAA	-17	NA	39883506	39841050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39883317
transcript_26922.nnic	chr13	-	2199	5	NNC	ENSG00000234787.8	novel	1020	3	NA	NA	-54	6879	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	725.511199086548	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTATGGCATAGTTCAC	33	False	NA	-18	True	AATAAA	-15	NA	54132920	54108903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_54110330_54110894_54111012_54127279_54127430_54130873_54131072_54132612
transcript_26926.nnic	chr13	-	1188	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-54	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	698.375749507384	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	33	False	NA	-3	True	CATAAA	-23	NA	54132920	54115782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
transcript_26927.nnic	chr13	-	1135	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-54	13	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	698.375749507384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTTTATCTGCTAAAA	33	False	NA	-56	True	NA	NA	NA	54132920	54115835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
transcript_26928.nnic	chr13	-	880	5	NNC	ENSG00000234787.8	novel	1020	3	NA	NA	0	-3630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	698.375749507384	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTATTTCTCTGTAAC	87	False	NA	3	True	AATAAA	-24	NA	54132866	54119478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_54119652_54120939_54121045_54127279_54127430_54130873_54131072_54132612
transcript_2693.known	chr1	-	545	4	FSM	ENSG00000043514.17	ENST00000541099.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	75.4895136205464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATCCAGTTCAGGAG	66	False	NA	NA	False	NA	NA	NA	39883434	39841713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39883317
transcript_26932.nic	chr13	-	1078	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-54	-5	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	571.356864548477	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGGCGTGGCCTCTGC	33	False	NA	-8	True	CATAAA	-18	NA	54132920	54115787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
transcript_26936.known	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	643.008726396635	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	1	True	NA	-5	True	ATTAAA	-18	NA	54132862	54124323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
transcript_26938.known	chr13	-	833	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	619.910387789146	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGTTTGTTTATAC	134	False	NA	NA	False	NA	NA	NA	54132819	54124994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
transcript_26939.nic	chr13	-	861	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-35	-5	combination_of_known_junctions	FALSE	canonical	3	298	junction_2	37	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGGCGTGGCCTCTGC	-3	True	NA	-8	True	CATAAA	-18	NA	54132901	54115787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_54116210_54127279_54127430_54132612
transcript_26940.known	chr13	-	849	3	FSM	ENSG00000234787.8	ENST00000607494.5	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTCTAAACCTTATTC	102	False	NA	NA	False	ACTAAA	-19	NA	54132851	54124812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54125273_54127279_54127430_54132612
transcript_26942.known	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	87	False	NA	NA	False	AATAAA	-26	NA	54132866	54126861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_54127430_54130873_54131072_54132612
transcript_26945.nic	chr13	-	361	2	ISM	ENSG00000234787.8	ENST00000607494.5	849	3	-50	2545	-35	3	5prime_fragment	FALSE	canonical	3	298	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTCTGGACTGAAC	-3	True	NA	-34	True	AATAAA	-17	NA	54132901	54127357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_54127430_54132612
transcript_26952.nnic	chr13	+	1318	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	6	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	191	False	NA	10	True	AATAAA	-25	NA	54268678	54353580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_26955.nnic	chr13	+	1223	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	6	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCCTGTTTCTTATTTT	662	False	NA	NA	False	ATTAAA	-6	NA	54269149	54353956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_26958.nnic	chr13	+	1483	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	14	False	NA	10	True	AATAAA	-25	NA	54268501	54353580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr13_+_54269408_54335042_54335144_54353104
transcript_2696.known	chr1	+	2129	14	FSM	ENSG00000168389.18	ENST00000372811.10	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	6.73505358149155	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTTTCTGTCTGTG	-6	True	NA	16	True	CATAAA	-13	NA	39955144	39969956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39955386_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_26967.nnic	chr13	+	872	4	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	51.8137690837741	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCCAGCGTCGTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	55039741	55161490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871_55063003_55106769_55106837_55160956
transcript_26979.nnic	chr13	+	1292	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23207	-87087	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	24.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTAGCCAGCGTGG	NA	False	NA	NA	False	AATACA	-16	NA	55039737	55074403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039846_55062871_55063003_55073350
transcript_2698.known	chr1	+	1914	12	FSM	ENSG00000168389.18	ENST00000420632.6	1914	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.0606518355241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCTCAGCCACT	NA	False	NA	28	True	CATAAA	-25	NA	39955111	39969968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_39955386_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_26980.nnic	chr13	+	1891	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-86484	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTTTTCTATTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	55039741	55075006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039846_55062871_55063003_55073350
transcript_26985.nnic	chr13	+	630	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-87781	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTTCTGTCTGACAGT	NA	False	NA	6	True	NA	NA	NA	55039741	55073709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_26986.nnic	chr13	+	1165	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-87246	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGAAAAAATCAAAATTGG	NA	False	NA	NA	False	GATAAA	-32	NA	55039741	55074244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_26987.nnic	chr13	+	1324	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-87087	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTAGCCAGCGTGG	NA	False	NA	NA	False	AATACA	-16	NA	55039741	55074403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_26988.nnic	chr13	+	1927	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-86484	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTTTTCTATTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	55039741	55075006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_26989.nnic	chr13	+	505	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23149	-82382	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	62.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCCTTTTCCTTTGAT	NA	False	NA	3	True	AATAAA	-17	NA	55039795	55079108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871_55063003_55078820
transcript_26992.nnic	chr13	+	1612	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-53380	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	52	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAACACAGGAAAAT	NA	False	NA	NA	False	TATAAA	-23	NA	55039741	55108110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871_55063003_55106769
transcript_26995.nnic	chr13	+	1085	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23289	-97724	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACCTATAATGAGAAGGT	NA	False	NA	NA	False	NA	NA	NA	55039655	55063766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039846_55062871
transcript_26996.nnic	chr13	+	495	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-98264	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGCACTTGCTTTATC	NA	False	NA	28	True	AATAAA	-39	NA	55039741	55063226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871
transcript_26997.nnic	chr13	+	1036	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-97723	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATAATGAGAAGGTG	NA	False	NA	NA	False	NA	NA	NA	55039741	55063767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_55039882_55062871
transcript_27.known	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2867	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00074_+_0_500
transcript_27008.nnic	chr13	-	902	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-226	19302	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	56	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGAGTTATTTGATATT	NA	False	NA	NA	False	AATAAA	-24	NA	55583750	55516394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55516934_55581427_55581530_55583489
transcript_27013.nnic	chr13	-	1247	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-265	-18443	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	45	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	55583789	55554139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55554985_55581427_55581530_55583489
transcript_27018.nnic	chr13	-	2681	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-180	-38771	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	42.5	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAATACAAATTAATTT	NA	False	NA	-31	True	AATAAA	-15	NA	55583704	55574467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55576832_55581427_55581530_55583489
transcript_27023.nnic	chr13	-	706	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-213	-42573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	55583737	55578269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55578626_55581427_55581530_55583489
transcript_27025.nic	chr13	-	1056	2	ISM	ENSG00000274090.1	ENST00000617598.1	809	3	-176	18443	-176	-18443	5prime_fragment	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	55583700	55554139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_55554985_55583489
transcript_27026.nnic	chr13	-	2575	2	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-265	-43558	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTGTCATCCCTAC	NA	False	NA	NA	False	NA	NA	NA	55583789	55579254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55581530_55583489
transcript_27027.nnic	chr13	-	2580	2	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-213	-43558	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTGTCATCCCTAC	NA	False	NA	NA	False	NA	NA	NA	55583737	55579254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_55581587_55583489
transcript_27028.known	chr13	+	8300	4	FSM	ENSG00000118946.12	ENST00000377918.8	8300	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTTGCCTTCCCTTGA	-7	True	NA	15	True	AATAAA	-16	NA	57631743	57729311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_57635112_57666467_57666527_57666660_57666834_57724611
transcript_27029.known	chr13	-	4745	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0384263749541	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-9	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_27031.known	chr13	-	3449	27	FSM	ENSG00000139734.19	ENST00000267215.8	3449	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.6760163801195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCTATGAGATTGC	4	True	NA	NA	False	AGTAAA	-15	NA	60163766	59774058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_27037.nic	chr13	-	2338	18	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-213	150761	-51	-63566	5prime_fragment	FALSE	canonical	3	104	junction_17	23.146741159342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAACTTAAGTTTTTA	NA	False	NA	NA	False	AAGAAA	-17	NA	60163979	59924819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_27038.nic	chr13	-	2286	17	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-213	195886	-51	-108691	5prime_fragment	FALSE	canonical	3	104	junction_16	23.0837469878701	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTTTAACATCTTGAT	NA	False	NA	NA	False	AATACA	-19	NA	60163979	59969944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_27039.nic	chr13	-	2235	16	ISM	ENSG00000139734.19	ENST00000377908.6	3549	27	-195	303361	-33	-108691	5prime_fragment	FALSE	canonical	3	39	junction_15	35.2754242434525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTTTAACATCTTGAT	-42	True	NA	NA	False	AATACA	-19	NA	60163961	59969944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60163586
transcript_27047.nic	chr13	-	914	6	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-213	242012	-51	-154817	5prime_fragment	FALSE	canonical	3	104	junction_5	16.8475517509222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTGCTAATAATTA	NA	False	NA	NA	False	NA	NA	NA	60163979	60016070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_27050.known	chr13	+	3019	14	FSM	ENSG00000083544.16	ENST00000196169.7	3019	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	16.7536978166775	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTTTTATTTGCCT	NA	False	NA	22	True	AATAAA	-23	NA	60396456	60573878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_27051.known	chr13	+	2484	14	FSM	ENSG00000083544.16	ENST00000377894.6	2484	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.0186114620046	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTTTTATTTGCC	1	True	NA	21	True	AATAAA	-22	NA	60396987	60573877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_27052.nic	chr13	+	2882	14	NIC	ENSG00000083544.16	novel	2645	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	5.7779421409889	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTACTGTGTGTTTT	-2	True	NA	14	True	AATAAA	-15	NA	60396984	60573870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_27053.known	chr13	+	2645	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	7.8401183423021	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	-7	True	NA	15	True	AATAAA	-16	NA	60397219	60573871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_27056.nic	chr13	+	1903	11	ISM	ENSG00000083544.16	ENST00000377881.8	2645	14	-146	45034	86	0	5prime_fragment	FALSE	canonical	3	43	junction_7	5.45527267879434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAACATCTATTCCTGAT	0	True	NA	NA	False	AAAAAG	-6	NA	60397073	60528837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366
transcript_27060.known	chr13	-	4778	2	FSM	ENSG00000280165.1	ENST00000409204.4	4778	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGTAGTTATAGACA	138	False	NA	NA	False	ATTAAA	-41	NA	61415522	61409684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_61413967_61415026
transcript_27064.known	chr13	-	2231	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	32.5	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGTACTTTTGTTTT	-4	True	NA	-10	True	AATAAA	-16	NA	72727629	72708366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_72710346_72718951_72719098_72727523
transcript_27070.known	chr13	-	10571	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_20	24.2373162705775	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTAATTGCAAACT	3	True	NA	-4	True	AATAAA	-17	NA	72781900	72752168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
transcript_27073.known	chr13	+	2760	12	FSM	ENSG00000136122.18	ENST00000390667.11	2760	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	20.8473396443751	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	0	True	NA	22	True	AATAAA	-16	NA	72727922	72756196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_72728008_72728925_72729094_72731280_72731388_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_27078.known	chr13	+	1673	11	FSM	ENSG00000136122.18	ENST00000651376.1	1673	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	29.0757631026255	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTCTGTCAGAATCAA	0	True	NA	NA	False	AAAACA	-31	NA	72727922	72755216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_27082.nnic	chr13	+	1868	10	NIC	ENSG00000136122.18	novel	2829	11	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	3	9	junction_2	37.5749456847229	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGTGATGTGTTTAAC	-8	True	NA	24	True	AATAAA	-15	NA	72727914	72755449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_72728008_72728925_72729094_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_27090.known	chr13	+	3080	18	FSM	ENSG00000083535.16	ENST00000326291.11	3080	18	0	0	0	0	multi-exon	TRUE	canonical	2	42	junction_8	9.40624838341616	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGAAAGTCTGTTGC	2	True	NA	NA	False	AATAAA	-41	NA	72782132	73016461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590_72973676_72998821_72998996_73015868
transcript_27100.known	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	998.670240870328	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-9	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
transcript_27105.known	chr13	-	1669	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	1994	junction_2	63.5207752541551	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTTGAATTTAAAAAGC	-9	True	NA	NA	False	AATAAA	-17	NA	75537841	75525213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
transcript_27107.known	chr13	-	392	4	FSM	ENSG00000188243.14	ENST00000497707.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	949.051105051778	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-9	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75530310_75530409_75537663_75537676_75537763
transcript_27111.known	chr13	-	594	3	FSM	ENSG00000188243.14	ENST00000377619.9	594	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	1040	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	214	False	NA	-21	True	AATAAA	-18	NA	75537618	75526435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_75526640_75530113_75530267_75537381
transcript_27112.nnic	chr13	+	793	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	409.807072577687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTTGCCTTAACCTG	-3	True	NA	25	True	ATTAAA	-12	NA	75549777	75605928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75605728
transcript_27114.known	chr13	+	3472	24	FSM	ENSG00000136153.20	ENST00000377499.9	3472	24	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_17	33.9632849691828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATGGTAAATGCG	-13	True	NA	NA	False	AATAAA	-36	NA	75636322	75845368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_75636727_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326
transcript_27115.known	chr13	+	2039	1	FSM	ENSG00000136153.20	ENST00000605961.1	2039	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGTGGGTCGTCTTTTT	7125	False	NA	16	True	AATAAA	-16	NA	75856636	75858675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_75856600_75858700
transcript_27121.nic	chr13	+	1027	9	NIC	ENSG00000118939.18	novel	1050	8	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	362.853599093353	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	NA	False	NA	30	True	ATTAAA	-17	NA	75549415	75605933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_27122.known	chr13	+	931	9	FSM	ENSG00000118939.18	ENST00000377595.8	931	9	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_8	56.9802597396677	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAAAACTAGCAATAG	10	True	NA	117	True	NA	NA	NA	75549790	75606020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_27128.nnic	chr13	-	3321	5	NNC	ENSG00000005812.11	novel	3506	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.4529150942547	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTACTTTTTAAA	1	True	NA	-10	True	AATAAA	-15	NA	77027159	77005259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512_77021862_77027011
transcript_27130.known	chr13	-	3506	5	FSM	ENSG00000005812.11	ENST00000355619.10	3506	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	15.6424902109607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTACTTTTTAAA	1	True	NA	-10	True	AATAAA	-15	NA	77027159	77005259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512_77021862_77026826
transcript_27132.known	chr13	+	5243	4	FSM	ENSG00000102805.16	ENST00000377453.9	5243	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	18.0616229121921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAACCTTGTATCTTCA	-6	True	NA	NA	False	AATAGA	-8	NA	76992080	77005117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77000457
transcript_27133.known	chr13	+	2341	3	FSM	ENSG00000102805.16	ENST00000485938.4	2341	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAGGATATGTTAAC	-28	True	NA	NA	False	ATTAAA	-45	NA	76992058	76997863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_76992272_76995062_76995229_76995901
transcript_27134.known	chr13	-	2555	8	FSM	ENSG00000136160.17	ENST00000475537.2	2555	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	140.01603406724	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATCTACAATTTTTT	227	False	NA	NA	False	NA	NA	NA	77919390	77897349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919065
transcript_27135.known	chr13	-	4471	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	125.107300884856	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTGTGTGTTTCATTG	NA	False	NA	0	True	ATTAAA	-24	NA	77919768	77895480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
transcript_27138.known	chr13	-	4300	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	100.500414592843	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGACTGTGTGTT	-2	True	NA	-6	True	ATTAAA	-18	NA	77918831	77895486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_2714.known	chr1	+	2964	13	FSM	ENSG00000131236.18	ENST00000372802.5	2964	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	698.658178224516	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGCAACTTTTTTTT	1	True	NA	NA	False	NA	NA	NA	40040239	40072515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40040784_40059333_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_27147.known	chr13	-	1571	7	FSM	ENSG00000136160.17	ENST00000626030.1	1571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.870305173673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAACTTGTTCTTTAAT	1	True	NA	NA	False	TATAAA	-5	NA	77918799	77896407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_77896559_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_27149.known	chr13	-	3507	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	28.2460616723819	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGATGTCGATGATGA	-6	True	NA	-8	True	AATAAA	-20	NA	78659155	78614288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_27152.nic	chr13	-	709	5	ISM	ENSG00000152193.8	ENST00000282003.7	3507	6	-36	20821	-36	-20821	5prime_fragment	FALSE	canonical	3	209	junction_1	19.5256241897666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTGCTCCCAGA	-4	True	NA	NA	False	NA	NA	NA	78659191	78635109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_27154.known	chr13	-	3624	21	FSM	ENSG00000139746.16	ENST00000267229.11	3624	21	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	33.9527244856727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAAGACAATGTTCC	9	True	NA	-113	True	AAAAAG	-42	NA	79405788	79319953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_27156.known	chr13	-	5152	21	FSM	ENSG00000139746.16	ENST00000438724.5	5152	21	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_14	27.5326624212044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	3	True	NA	NA	False	NA	NA	NA	79406221	79318867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_27161.known	chr13	+	1756	6	FSM	ENSG00000227354.7	ENST00000456602.5	1756	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	11.5516232625549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGAAAATTGTGTTG	9	True	NA	7	True	AATAAA	-23	NA	79406308	79422955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_79406478_79412681_79412908_79415110_79415365_79417834_79417917_79420759_79420816_79421986
transcript_27165.known	chr13	+	1502	5	FSM	ENSG00000227354.7	ENST00000656910.1	1502	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	11.7473401244707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGGAAATGATTTTGAAAA	1	True	NA	-1	True	AATAAA	-15	NA	79406300	79422947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_79406478_79412681_79412908_79417834_79417917_79420759_79420816_79421986
transcript_27170.known	chr13	+	2359	4	FSM	ENSG00000227354.7	ENST00000654024.1	2359	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	10.1980390271856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTACATAGTGAATACAA	-7	True	NA	NA	False	NA	NA	NA	79406292	79424022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_79406478_79417834_79417917_79420759_79420816_79421986
transcript_27175.known	chr13	+	2324	8	FSM	ENSG00000102471.15	ENST00000620924.1	2324	8	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_7	22.0305909765378	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTTTGTCTCATT	0	True	NA	81	True	AATAAA	-27	NA	79481473	79554096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
transcript_27181.known	chr13	+	698	7	FSM	ENSG00000102471.15	ENST00000465762.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.131808521074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACTTTAATAGAAGACTA	1	True	NA	-7	True	NA	NA	NA	79481456	79552578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79548327_79548395_79551016_79551123_79552515
transcript_27183.known	chr13	-	2708	2	FSM	ENSG00000136158.12	ENST00000377102.5	2708	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	2303	False	NA	-22	True	ATTAAA	-1	NA	80339659	80335975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_80337757_80338732
transcript_27184.known	chr13	-	2286	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	2	True	NA	-22	True	ATTAAA	-1	NA	80341126	80335975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_80337757_80340621
transcript_27186.known	chr13	+	792	5	FSM	ENSG00000183098.11	ENST00000617456.1	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	9.52299847737046	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTTTTGGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	94286347	94403217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_94286480_94305979_94306124_94382413_94382551_94398465_94398642_94403014
transcript_27187.nnic	chr13	-	2030	13	NNC	ENSG00000088451.11	novel	1797	12	NA	NA	-70	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_7	43.6192490637894	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	94596312	94574053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94581560_94581634_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_27191.nic	chr13	-	2010	12	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	33.6041614896353	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	94596289	94574053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94595974
transcript_27192.known	chr13	-	1797	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	16.5848681405572	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	14	True	NA	NA	False	AATAAA	-17	NA	94596152	94574053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_27199.nnic	chr13	-	1788	11	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	35.0964385657576	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	36	False	NA	NA	False	AATAAA	-17	NA	94596234	94574053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94592240_94592310_94593840_94593908_94596050
transcript_2720.known	chr1	+	2592	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	549.491349391012	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	1	True	NA	19	True	AATAAA	-10	NA	40040752	40072641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_27202.known	chr13	+	8884	9	FSM	ENSG00000152749.8	ENST00000376958.5	8884	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	23.3288314109387	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGTCTGCAAATAAT	-18	True	NA	26	True	AATAAA	-38	NA	94601856	94634661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_94602073_94605390_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
transcript_27210.known	chr13	+	3287	2	FSM	ENSG00000227640.4	ENST00000438290.2	3287	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACAGGCTGGCTTGCTTGC	-1	True	NA	NA	False	AATAAA	-17	NA	94712715	94716246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_94713394_94713637
transcript_27213.known	chr13	-	3480	23	FSM	ENSG00000125257.16	ENST00000643816.1	3480	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	58.5909796177021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACTATGTTTCAATAAA	4	True	NA	-38	True	AATACA	-13	NA	95301444	95075040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95075552_95083139_95083291_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95266111_95266265_95301240
transcript_27214.known	chr13	-	2840	20	FSM	ENSG00000125257.16	ENST00000536256.3	2840	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	61.776605851009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGTCATTGATTTTT	15	True	NA	-20	True	CATAAA	-20	NA	95301433	95095768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95096180_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95246974_95247096_95247642_95247754_95301240
transcript_27215.nic	chr13	-	1560	13	ISM	ENSG00000125257.16	ENST00000629385.1	2903	21	106559	0	-45927	0	3prime_fragment	FALSE	canonical	3	32	junction_1	52.469237018784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTCTTAACAATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	95194887	95095943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_95096180_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835
transcript_27217.nnic	chr13	+	1091	6	NNC	ENSG00000134873.10	novel	2466	5	NA	NA	-56	-1521	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	300.767418448209	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAAATGTTTTCTACA	241	False	NA	21	True	AATAAA	-17	NA	95552663	95578238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_95552974_95557534_95557625_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_27221.known	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_3	42.2315048275574	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	-8	True	NA	4	True	AATAAA	-19	NA	95552719	95579759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_27226.nic	chr13	+	1029	3	ISM	ENSG00000134873.10	ENST00000299339.3	2466	5	-56	18821	-56	0	5prime_fragment	FALSE	canonical	3	599	junction_1	44.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATACGATGCAAGGTTT	241	False	NA	NA	False	AATAAA	-15	NA	95552663	95560938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_95552974_95560131_95560294_95560381
transcript_27229.known	chr13	-	2909	2	FSM	ENSG00000247400.5	ENST00000671463.2	2927	2	18	0	-10	0	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATCTAGTAAAATATCTA	215	False	NA	NA	False	TTTAAA	-44	NA	95676955	95672863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95674669_95675851
transcript_2723.known	chr1	-	2284	9	FSM	ENSG00000131238.18	ENST00000642050.2	2284	9	0	0	0	0	multi-exon	FALSE	canonical	3	1582	junction_2	86.3376366366372	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTGTTTTCAGTATT	-5	True	NA	-17	True	AATAAA	-14	NA	40097252	40072711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_27230.known	chr13	+	5590	12	FSM	ENSG00000102580.15	ENST00000602402.6	5590	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.08208315770099	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGCTTTTGATTCAT	-6	True	NA	22	True	AATAAA	-23	NA	95677138	95794988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006_95787156_95790872
transcript_27236.known	chr13	-	4850	39	FSM	ENSG00000102595.21	ENST00000376747.8	4850	39	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_20	44.4943271929644	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	-5	True	NA	-4	True	AATAAA	-21	NA	96053401	95801579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_2724.known	chr1	-	2195	8	FSM	ENSG00000131238.18	ENST00000439754.6	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	593.866851015187	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-5	True	NA	-34	True	NA	NA	NA	40097252	40072728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_27244.nnic	chr13	-	1315	11	NNC	ENSG00000102595.21	novel	1547	10	NA	NA	-32	-277	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	58.4657164498991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATTCCTTTTTTAA	377	False	NA	NA	False	AATAAA	-17	NA	96053433	95983800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_95983865_95985238_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_27245.nic	chr13	-	1355	10	ISM	ENSG00000102595.21	ENST00000376747.8	4850	39	-32	182082	-32	-138	5prime_fragment	FALSE	canonical	3	79	junction_1	37.6192753325102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGACTATATGAGCA	377	False	NA	NA	False	ATTAAA	-25	NA	96053433	95983661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_27246.nnic	chr13	-	2169	10	NNC	ENSG00000102595.21	novel	1547	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	57.735882246359	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTGTAATTTCTCA	377	False	NA	-11	True	AATAAA	-22	NA	96053433	95984903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_95985921_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_27247.known	chr13	-	1547	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	36.8443506231214	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTTTTAATTGTAAT	-4	True	NA	-17	True	AATAAA	-16	NA	96053400	95984909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_27250.known	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	64.0707517084808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	3	True	NA	NA	False	NA	NA	NA	96053393	95990144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_27253.known	chr13	-	2503	4	FSM	ENSG00000165621.9	ENST00000541038.2	2503	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTTGGTCATATTT	NA	False	NA	NA	False	AATAAA	-20	NA	96994476	96985712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_96987834_96989757_96989810_96992421_96992573_96994297
transcript_27254.known	chr13	-	2285	4	FSM	ENSG00000165621.9	ENST00000298440.5	2285	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAATAGGCTGTTTGGTC	NA	False	NA	NA	False	AATAAA	-14	NA	96994350	96985718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_96987834_96989757_96989810_96992507_96992573_96994297
transcript_27255.known	chr13	-	2338	4	FSM	ENSG00000165621.9	ENST00000543457.6	2338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTTGGTCATATTT	NA	False	NA	NA	False	AATAAA	-20	NA	96994369	96985712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_96987776_96989757_96989810_96992421_96992573_96994297
transcript_27257.known	chr13	+	3419	26	FSM	ENSG00000065150.21	ENST00000490680.5	3419	26	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_11	190.114508652023	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	12	False	NA	33	True	AATAAA	-19	NA	97976631	98021882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
transcript_2726.known	chr1	-	1957	6	FSM	ENSG00000131238.18	ENST00000449045.7	1957	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	676.442281351484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	NA	False	NA	-43	True	NA	NA	NA	40097260	40072737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40097114
transcript_27268.nic	chr13	+	1880	10	ISM	ENSG00000065150.21	ENST00000490680.5	3419	26	-15	20545	-15	415	5prime_fragment	FALSE	canonical	3	1189	junction_3	109.081122830784	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTTGTTTGTTTTTTGG	-3	True	NA	8	True	ATTAAA	-20	NA	97976616	98001337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538
transcript_27271.known	chr13	-	3124	23	FSM	ENSG00000088386.17	ENST00000376503.10	3124	23	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_4	3.00996966020787	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAGTGTTCATGTATCT	-18	True	NA	-4	True	AATAAA	-14	NA	98752672	98683800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_98684916_98686189_98686298_98687580_98687725_98688247_98688357_98688469_98688578_98702479_98702530_98704288_98704436_98706133_98706254_98708685_98708768_98709571_98709661_98709741_98709775_98709866_98709912_98711853_98711944_98712497_98712585_98715877_98715961_98719236_98719321_98721494_98721586_98721803_98721904_98723911_98724032_98726122_98726265_98726367_98726450_98726842_98726860_98752594
transcript_27272.nic	chr13	-	1757	5	ISM	ENSG00000088387.21	ENST00000400228.6	3147	15	26731	0	24393	0	3prime_fragment	FALSE	canonical	3	61	junction_3	6.75925291729789	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTGGCTGCTGGGTGTT	NA	False	NA	-1	True	ATTAAA	-44	NA	98805062	98793486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_98794749_98797114_98797254_98797388_98797490_98800287_98800479_98804998
transcript_27273.nic	chr13	-	1689	5	ISM	ENSG00000088387.21	ENST00000400228.6	3147	15	26731	68	24393	-63	3prime_fragment	FALSE	canonical	3	61	junction_3	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCACTGCCCTGCTGTAA	NA	False	NA	-2	True	AATAAA	-23	NA	98805062	98793554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_98794749_98797114_98797254_98797388_98797490_98800287_98800479_98804998
transcript_27274.known	chr13	-	1771	2	FSM	ENSG00000228889.8	ENST00000658188.1	1765	2	-9	3	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	NA	False	NA	-15	True	AATAAA	-16	NA	99200710	99196376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_99197803_99200365
transcript_27283.known	chr13	+	2259	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_8	30.7164451068153	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCACTGCTCGTCTT	-2	True	NA	10	True	AATAAA	-40	NA	99200853	99386504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_27286.nnic	chr13	+	2063	8	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	197.208374206429	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCAGTATTTTTCTATC	-2	True	NA	24	True	AATAAA	-18	NA	99200853	99386428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99385227
transcript_2729.known	chr1	-	2368	10	FSM	ENSG00000131238.18	ENST00000641471.1	2368	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	713.420088182427	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTTTCAGTATTTT	0	True	NA	-15	True	AATAAA	-16	NA	40097247	40072709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40093932_40094020_40097114
transcript_27297.known	chr13	+	748	5	FSM	ENSG00000134882.16	ENST00000355700.9	748	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	233.208061610228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGCTGCAGCACTGA	349	False	NA	NA	False	NA	NA	NA	99200773	99385315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99200940_99238426_99238555_99340319_99340566_99367786_99367907_99385227
transcript_27299.known	chr13	+	3858	19	FSM	ENSG00000125304.10	ENST00000642475.1	3858	19	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	510.820125501417	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGAGTCTTTCAATTT	NA	False	NA	-44	True	TTTAAA	-7	NA	99498955	99563334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99499470_99500596_99500785_99501018_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_273.known	chr1	-	1798	15	FSM	ENSG00000127054.22	ENST00000419704.5	1798	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	124.040233762424	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTACTTGGTACTCT	4	True	NA	-21	True	AGTAAA	-9	NA	1324653	1311605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1320995_1321094_1324580
transcript_2730.known	chr1	+	6232	8	FSM	ENSG00000117000.9	ENST00000372771.5	6232	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	18.5736262435943	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTGTTTACTCATAATG	4	True	NA	7	True	AATAAA	-18	NA	40161386	40240921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631_40195765_40202411_40202615_40222573_40222711_40231516_40231659_40235791
transcript_27301.known	chr13	+	3417	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_5	198.62165667419	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTTTTGAGA	-1	True	NA	NA	False	NA	NA	NA	99501471	99564048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_27302.known	chr13	+	1169	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	6	6	6	-6	multi-exon	FALSE	canonical	3	66	junction_7	16.3013611394877	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	19	True	NA	4	True	ATTAAA	-16	NA	99606695	99892564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_27305.known	chr13	+	6771	8	FSM	ENSG00000125246.16	ENST00000376355.7	6771	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	14.8982946565528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTTGAAACCAGCCAC	-8	True	NA	NA	False	ATTAAA	-24	NA	99606668	99897134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317
transcript_27306.nic	chr13	+	1119	8	ISM	ENSG00000125246.16	ENST00000693071.1	3252	9	-29	16864	-25	-6	5prime_fragment	FALSE	canonical	3	5	junction_3	32.9675164799707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	NA	False	NA	4	True	ATTAAA	-16	NA	99606643	99892564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_27308.nic	chr13	+	1013	5	ISM	ENSG00000125246.16	ENST00000339105.9	1181	9	-46	27332	-25	0	5prime_fragment	FALSE	canonical	3	88	junction_1	8.09320702811932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	NA	False	NA	8	True	AATAAA	-22	NA	99606643	99865238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817
transcript_27310.nnic	chr13	+	1211	2	NNC	ENSG00000125246.16	novel	6771	8	NA	NA	0	-206224	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAGTTGCTTAGTATTT	-8	True	NA	7	True	ATTAAA	-25	NA	99606668	99659014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_99606758_99657892
transcript_27311.known	chr13	+	218	2	FSM	ENSG00000043355.12	ENST00000481565.1	218	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAAATATAAAACAAATA	2436	False	NA	-31	True	NA	NA	NA	99985493	99985904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_99985673_99985865
transcript_27312.known	chr13	-	913	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	119	6	102	-6	multi-exon	FALSE	canonical	3	261	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGATTTGAGGATTGC	95	False	NA	-12	True	AATAAA	-19	NA	100088848	100086030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100086728_100088632
transcript_27326.known	chr13	+	2484	24	FSM	ENSG00000175198.17	ENST00000376285.6	2484	24	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_22	29.9563008763234	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	6	True	NA	32	True	AATAAA	-19	NA	100089092	100530435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_27331.known	chr13	+	2418	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_21	64.7628381605653	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	29	True	AATAAA	-16	NA	100089014	100530432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
transcript_27338.known	chr13	+	2481	23	FSM	ENSG00000175198.17	ENST00000376286.8	2481	23	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	75.2363218946235	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	29	True	AATAAA	-16	NA	100089014	100530432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_100089226_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_2734.known	chr1	-	1541	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTAGTGTATGTTTTA	-25	True	NA	-4	True	AATAAA	-17	NA	40257967	40256426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40256400_40258000
transcript_27359.known	chr13	-	2644	3	FSM	ENSG00000134864.11	ENST00000683975.1	2644	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAATCCTTCATTCC	-25	True	NA	NA	False	ATTAAA	-18	NA	100588789	100530179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100532602_100583824_100583998_100588740
transcript_27360.known	chr13	-	348	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	943	False	NA	NA	False	NA	NA	NA	100540248	100539900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100539900_100540200
transcript_27361.known	chr13	-	3911	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	22.1289710114296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTTTTTTTTG	12	True	NA	-2	True	AATAAA	-16	NA	100674795	100603624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_27364.known	chr13	-	3483	18	FSM	ENSG00000125247.16	ENST00000376234.7	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	38.1190994639779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	NA	False	NA	-4	True	AGTAAA	-26	NA	100674879	100603926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
transcript_27369.nic	chr13	-	2231	15	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-54	21828	30	0	5prime_fragment	FALSE	canonical	3	137	junction_9	13.402710660953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCCCATACATTTTATA	NA	False	NA	-9	True	AATAAA	-19	NA	100674849	100625452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_27375.nic	chr13	-	894	3	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-54	64592	30	145	5prime_fragment	FALSE	canonical	3	144	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCACGCATTTGCTGCA	NA	False	NA	NA	False	AAAACA	-30	NA	100674849	100668216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_100668795_100670359_100670570_100674743
transcript_27376.known	chr13	+	1074	1	FSM	ENSG00000272143.1	ENST00000606448.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGTCGTGAACAGAG	7	True	NA	8	True	ATTAAA	-16	NA	102394629	102395703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102394600_102395700
transcript_27377.known	chr13	-	536	1	FSM	ENSG00000276957.1	ENST00000615349.1	536	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAAATTGTCCCGTTAT	2930	False	NA	NA	False	AATAAA	-15	NA	102593873	102593337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102593300_102593900
transcript_27378.known	chr13	+	5484	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_24	65.6734797715426	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTATTCATTTGTG	-15	True	NA	NA	False	AATAAA	-17	NA	102596985	102679958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_2738.nic	chr1	+	3318	11	NIC	ENSG00000084073.10	novel	3357	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	320.053370549351	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTACTTTGTCTTT	19	False	NA	14	True	ATTAAA	-14	NA	40258069	40294174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_40258395_40259349_40259533_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_27383.known	chr13	+	3931	29	FSM	ENSG00000134900.12	ENST00000376065.8	3931	29	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_13	34.0503079191328	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGACGTGTGGCTTAA	2	True	NA	10	True	ATTAAA	-23	NA	102597002	102678461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_27385.nic	chr13	+	3700	28	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-56	2098	-39	0	5prime_fragment	FALSE	canonical	3	210	junction_13	28.3231402628385	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTTGTGGAAGAAAAAC	4	True	NA	NA	False	AATAAA	-30	NA	102596946	102676363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295
transcript_27386.known	chr13	+	3669	27	FSM	ENSG00000134900.12	ENST00000652308.1	3669	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	63.8273025923313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTATCAGAGAATTCA	20	True	NA	-6	True	ATTAAA	-7	NA	102597020	102678445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_27388.nic	chr13	+	3114	24	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-56	21336	-39	0	5prime_fragment	FALSE	canonical	3	210	junction_13	27.4106212080181	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTCAGAAAAAGAG	4	True	NA	30	True	NA	NA	NA	102596946	102657125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055
transcript_2739.known	chr1	+	2975	10	FSM	ENSG00000084073.10	ENST00000372759.4	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_9	53.8855669079175	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTGTCTTTAGTTTG	-1	True	NA	20	True	ATTAAA	-20	NA	40258235	40294180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_27394.nnic	chr13	+	2113	14	NNC	ENSG00000134900.12	novel	4341	27	NA	NA	-39	5505	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	73.2409495186302	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAATACTCATCTTT	4	True	NA	NA	False	TTTAAA	-10	NA	102596946	102637037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102636694
transcript_27395.nic	chr13	+	2415	13	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-56	41424	-39	5505	5prime_fragment	FALSE	canonical	3	234	junction_7	23.2598545423941	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAATACTCATCTTT	4	True	NA	NA	False	TTTAAA	-10	NA	102596946	102637037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223
transcript_27398.known	chr13	+	691	3	FSM	ENSG00000134900.12	ENST00000490010.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	160.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTGTCTTTTCTCAG	-2	True	NA	NA	False	AATAAA	-14	NA	102597032	102608022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102597204_102604792_102604922_102607631
transcript_27399.nic	chr13	+	482	3	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-56	64265	-39	6174	5prime_fragment	FALSE	canonical	3	276	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTACAATCTGGTACC	4	True	NA	16	True	NA	NA	NA	102596946	102614196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_102597204_102604792_102604922_102614100
transcript_27400.known	chr13	-	1362	6	FSM	ENSG00000151287.17	ENST00000376032.9	1362	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	16.1567323428966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCACTGAAGGCTT	2	True	NA	-1	True	AATAAA	-15	NA	102773786	102765887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_27404.known	chr13	-	1038	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	47.0345617604757	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-14	True	NA	-1	True	ATTAAA	-23	NA	102773759	102766109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
transcript_27406.known	chr13	-	959	5	FSM	ENSG00000151287.17	ENST00000376029.3	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	51.337121072378	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-23	True	NA	-1	True	ATTAAA	-23	NA	102773811	102766109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_27409.known	chr13	-	828	4	FSM	ENSG00000151287.17	ENST00000376022.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	61.5377029867779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-10	True	NA	-1	True	ATTAAA	-23	NA	102773755	102766109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102773681
transcript_27410.known	chr13	-	2029	10	FSM	ENSG00000134901.13	ENST00000376004.5	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	10.3112068961068	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTGTGCTAATTATTA	17	True	NA	-1	True	AATAAA	-21	NA	102798976	102784280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_102784513_102786231_102786340_102787833_102787924_102789011_102789222_102790900_102791139_102791257_102791431_102793340_102793419_102793600_102793807_102796803_102797010_102798488
transcript_27411.known	chr13	+	3888	15	FSM	ENSG00000134899.24	ENST00000652225.2	3888	15	0	0	0	0	multi-exon	FALSE	non_canonical	3	56	junction_8	14.2148241104066	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTAGTGTGTGGTT	-33	True	NA	12	True	AATAAA	-20	NA	102846031	102875995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_27412.known	chr13	+	4024	15	FSM	ENSG00000134899.24	ENST00000652613.1	4024	15	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	26.9254450629276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAACTGGTGGCACGG	17	False	NA	-10	True	AATGAA	-20	NA	102845866	102875973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_102846355_102852124_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_27413.known	chr13	-	3363	4	FSM	ENSG00000134884.15	ENST00000400198.8	3363	4	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	228.792482393981	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	1	True	NA	NA	False	TATAAA	-17	NA	106568137	106541672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_106544161_106557047_106557132_106559431_106559658_106567572
transcript_27414.known	chr13	-	3981	3	FSM	ENSG00000174405.15	ENST00000442234.6	3981	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	-1	True	NA	NA	False	AATAAA	-22	NA	108215536	108207441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_108211297_108214537_108214611_108215483
transcript_27415.known	chr13	-	4065	2	FSM	ENSG00000174405.15	ENST00000405925.2	4065	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATGTTCTATTCTTT	-44	True	NA	NA	False	AATAAA	-25	NA	108218368	108207438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_108211297_108218161
transcript_27416.known	chr13	+	5313	2	FSM	ENSG00000139826.6	ENST00000375898.4	5313	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTCTTCAGATAGTTT	-8	True	NA	11	True	AATAAA	-21	NA	108218391	108234243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_108218660_108229198
transcript_27420.known	chr13	-	1507	2	FSM	ENSG00000139832.5	ENST00000267328.5	1507	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGACTGAACTGAC	-24	True	NA	-1	True	ATTAAA	-22	NA	110561722	110523065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110524198_110561347
transcript_27424.known	chr13	+	1191	10	FSM	ENSG00000213995.12	ENST00000679389.1	1191	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	51.5018877755412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCTTGGACGGGGGAG	-5	True	NA	NA	False	AGTAAA	-2	NA	110615559	110638551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_27425.known	chr13	+	2515	10	FSM	ENSG00000213995.12	ENST00000680254.1	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	14.0905361813007	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-20	True	NA	11	True	ATTAAA	-23	NA	110615544	110639996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27427.known	chr13	+	2559	10	FSM	ENSG00000213995.12	ENST00000680505.1	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	47.0258662734184	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-6	True	NA	11	True	ATTAAA	-23	NA	110615627	110639996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27430.nic	chr13	+	2617	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	156	junction_1	14.8739495427408	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	NA	False	NA	11	True	ATTAAA	-23	NA	110615518	110639996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27432.known	chr13	+	2377	9	FSM	ENSG00000213995.12	ENST00000470164.2	2377	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	55.515763527128	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	26	True	NA	8	True	ATTAAA	-20	NA	110615590	110639993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27440.known	chr13	+	2216	7	FSM	ENSG00000213995.12	ENST00000424185.7	2216	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.3105222077833	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	-10	True	NA	8	True	ATTAAA	-20	NA	110615554	110639993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110615648_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27441.nnic	chr13	+	2117	6	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	58.8747823775171	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-17	True	NA	11	True	ATTAAA	-23	NA	110615547	110639996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_110615648_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27444.nnic	chr13	+	2193	5	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	36	junction_1	65.0845603810919	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-17	True	NA	11	True	ATTAAA	-23	NA	110615547	110639996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_110615648_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_27445.known	chr13	-	1838	15	FSM	ENSG00000134905.17	ENST00000257347.9	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	34.4937882606627	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-7	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_27447.known	chr13	+	4697	2	FSM	ENSG00000153487.13	ENST00000333219.9	4697	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	17	True	NA	NA	False	AATAAA	-19	NA	110713699	110723339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110714286_110719228
transcript_27450.known	chr13	+	2870	2	FSM	ENSG00000153487.13	ENST00000375774.3	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCGTGCTTATGTGCGT	98	False	NA	14	True	AATAAA	-14	NA	110714981	110721071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_110716009_110719228
transcript_27456.known	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	126.048562070339	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	118	False	110915091	-3	True	AATAAA	-16	NA	110915069	110878539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
transcript_2746.nic	chr1	-	2782	32	NIC	ENSG00000049089.15	novel	2852	32	NA	NA	97	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_31	82.4984343811335	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	1686	False	NA	-6	True	NA	NA	NA	40315938	40300488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40315844
transcript_27464.known	chr13	-	1193	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	248.929081266131	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	39	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
transcript_27465.known	chr13	-	997	5	FSM	ENSG00000088448.14	ENST00000465753.1	997	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	262.749405327586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCACCTTCGAGATGAG	8	True	NA	NA	False	NA	NA	NA	110915037	110892956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110893264_110900529_110900662_110906032_110906125_110910617_110910771_110914724
transcript_27466.nic	chr13	-	1329	5	NIC	ENSG00000088448.14	novel	997	5	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	254.461195469958	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	110	False	110915091	-6	True	ATTAAA	-18	NA	110915077	110892697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
transcript_27467.nnic	chr13	-	1228	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	269.780466305476	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	110	False	110915091	-6	True	ATTAAA	-18	NA	110915077	110892697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
transcript_2747.known	chr1	-	2852	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_30	49.0354625438433	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-2	True	NA	-6	True	NA	NA	NA	40317286	40300488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_27473.nic	chr13	-	1152	4	ISM	ENSG00000088448.14	ENST00000267339.6	2495	6	-8	14170	-8	-18	5prime_fragment	FALSE	canonical	3	259	junction_1	159.633608268713	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCACTGTGCCTGAATT	110	False	110915091	-18	True	ATTAAA	-6	NA	110915077	110892709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_-_110893264_110906032_110906125_110910617_110910771_110914724
transcript_27474.known	chr13	-	446	2	FSM	ENSG00000088448.14	ENST00000475809.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACCGCTTTGCGGGTG	8731	False	NA	NA	False	AGTAAA	-18	NA	110900739	110893027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_110893264_110900529
transcript_27483.nic	chr13	+	1858	3	ISM	ENSG00000102606.19	ENST00000491775.5	581	6	-9	10825	-9	-10825	5prime_fragment	FALSE	canonical	3	89	junction_1	13.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAAGAAA	-31	True	NA	NA	False	NA	NA	NA	111153637	111206975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_111153722_111153904_111153992_111205288
transcript_27486.nic	chr13	+	1637	3	NIC	ENSG00000126217.21	novel	1544	2	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	35.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCATTTGTTGTTCT	-27	True	NA	NA	False	TATAAA	-15	NA	112894334	112910619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_112894432_112902198_112902372_112909252
transcript_27487.known	chr13	+	1509	8	FSM	ENSG00000126218.12	ENST00000375551.7	1509	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	31.8651495383599	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCTGGTTTGTCTCTCG	-10	True	NA	20	True	ATTAAA	-15	NA	113122813	113149527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147487_113148915
transcript_27488.known	chr13	+	1450	8	FSM	ENSG00000126218.12	ENST00000409306.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	33.7499811035472	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGCCAAGAGCCATG	-10	True	NA	-45	True	GGGGCT	-2	NA	113122813	113149462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147493_113148915
transcript_27489.nnic	chr13	+	1432	7	NIC	ENSG00000126218.12	novel	1536	8	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	36.201979688041	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTTTGTCTCTCGAT	NA	False	NA	22	True	ATTAAA	-17	NA	113122770	113149529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113143850_113144096_113147378_113147497_113148915
transcript_27490.known	chr13	+	5821	20	FSM	ENSG00000139842.15	ENST00000375440.9	5821	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	261.517349519536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGACCCGTTGCCCCT	-3	True	NA	10	True	AATATA	-17	NA	113209612	113267108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113233176_113233340_113233896_113233987_113235062_113235146_113236822_113236891_113239432_113239552_113242967_113243161_113244409_113244515_113244948_113245060_113245151_113245238_113245955_113246064_113253081_113253196_113254692_113254799_113254952_113255126_113260606_113260760_113263486
transcript_27497.known	chr13	-	1671	15	FSM	ENSG00000126226.22	ENST00000375479.6	1671	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	236.556687342655	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	NA	False	NA	-16	True	AATAAA	-21	NA	113208715	113177610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_27498.known	chr13	-	1786	15	FSM	ENSG00000126226.22	ENST00000246505.9	1786	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	236.36468709628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-1	True	NA	-17	True	AATAAA	-20	NA	113208669	113177611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196226_113197018_113197244_113198190_113198265_113200426_113200517_113208598
transcript_27504.known	chr13	-	1654	15	FSM	ENSG00000126226.22	ENST00000375477.5	1654	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	243.147641383181	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	2	True	NA	-16	True	AATAAA	-21	NA	113208666	113177610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_27515.known	chr13	-	1897	14	FSM	ENSG00000126226.22	ENST00000337344.9	1897	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	208.704626929484	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGCTCACTCTAGCC	-1	True	NA	59	True	AATACA	-22	NA	113208669	113177535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_27524.known	chr13	+	1111	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	537.95219118431	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	-16	True	NA	75	True	CATAAA	-17	NA	113209599	113230212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
transcript_27529.known	chr13	-	1415	8	FSM	ENSG00000139835.14	ENST00000375431.9	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	57.4203974282339	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-19	True	NA	-2	True	NA	NA	NA	113364130	113324162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_27530.nic	chr13	-	1393	8	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	101.60628294891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-7	True	NA	-2	True	NA	NA	NA	113364160	113324162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364071
transcript_27531.nnic	chr13	-	1273	7	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_5	99.2790679515744	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	6	True	NA	-2	True	NA	NA	NA	113364147	113324162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761_113363911_113364019
transcript_27534.known	chr13	-	1834	7	FSM	ENSG00000139835.14	ENST00000375430.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	31.2978522514813	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCTA	5	True	NA	NA	False	NA	NA	NA	113364148	113324844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_27535.nic	chr13	-	2438	7	NIC	ENSG00000139835.14	novel	1834	7	NA	NA	-12	-37	intron_retention	FALSE	canonical	3	48	junction_6	105.035575983674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGATCAGTTTCT	-7	True	NA	-40	True	AATAAA	-14	NA	113364160	113324200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364071
transcript_27538.nnic	chr13	-	2318	6	NIC	ENSG00000139835.14	novel	1834	7	NA	NA	1	-37	intron_retention	FALSE	canonical	3	90	junction_4	102.534677060983	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGATCAGTTTCT	6	True	NA	-40	True	AATAAA	-14	NA	113364147	113324200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761_113363911_113364019
transcript_27540.nnic	chr13	-	879	6	NNC	ENSG00000139835.14	novel	1415	8	NA	NA	1	-7912	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	141.063106445307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTTGGTCAGTGCTGTG	6	True	NA	2	True	AATAAA	-21	NA	113364147	113332973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_-_113333195_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_27545.nic	chr13	-	1885	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	1	940	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	156.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGGTTCTGTTTGTGT	6	True	NA	-9	True	ATTAAA	-25	NA	113364147	113358676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113360285_113363761_113363911_113364019
transcript_27546.known	chr13	-	877	3	FSM	ENSG00000139835.14	ENST00000476439.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTTTCTCTTAAATACA	-20	True	NA	NA	False	NA	NA	NA	113364131	113359616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_-_113360285_113363761_113363911_113364071
transcript_27547.nic	chr13	-	1606	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	1	661	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	156.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGTGTGAACTTGGT	6	True	NA	NA	False	TATAAA	-13	NA	113364147	113358955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_-_113360285_113363761_113363911_113364019
transcript_2755.nic	chr1	-	718	7	ISM	ENSG00000049089.15	ENST00000372748.8	2852	32	-40	11741	-40	0	5prime_fragment	FALSE	canonical	3	288	junction_5	35.5152549383125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAAAGTA	298	False	NA	NA	False	NA	NA	NA	40317326	40312229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_27553.nnic	chr13	+	2421	11	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_4	192.953362240724	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	-32	True	NA	13	True	AATAAA	-24	NA	113584690	113641473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr13_+_113584731_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_27559.known	chr13	+	6117	9	FSM	ENSG00000184497.13	ENST00000375353.5	6117	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_7	10.1111015720346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCGTATTACGTGAAGT	-24	True	NA	NA	False	TTTAAA	-16	NA	113759225	113816995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_27565.known	chr13	+	694	5	FSM	ENSG00000184497.13	ENST00000488362.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4.9749371855331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	-10	True	NA	9	True	ATTAAA	-17	NA	113759239	113799660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338
transcript_27567.known	chr13	+	1952	2	FSM	ENSG00000272695.2	ENST00000608651.1	1952	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCCATCGTGTGG	-12	True	NA	NA	False	AATAAA	-18	NA	113864167	113866833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_113864296_113865009
transcript_27568.known	chr13	+	2034	19	FSM	ENSG00000130177.16	ENST00000252457.9	2034	19	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.8259256396272	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	7	False	NA	14	True	AATAAA	-15	NA	114235060	114272675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_27570.known	chr13	+	2331	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	39.3163022968536	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	12	True	NA	8	True	AATAAA	-18	NA	114234896	114272723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_27575.nnic	chr13	+	2157	17	NIC	ENSG00000130177.16	novel	2331	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	56	junction_1	89.1290321668535	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	69	False	NA	8	True	AATAAA	-18	NA	114235015	114272723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_27577.known	chr13	+	2370	10	FSM	ENSG00000169062.15	ENST00000375299.8	2370	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	103.123562466599	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGAATCTGTGTCA	1	True	NA	8	True	AATAAA	-25	NA	114281600	114305817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27582.known	chr13	+	2235	9	FSM	ENSG00000169062.15	ENST00000351487.5	2235	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	108.88526071053	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	-6	True	NA	-1	True	AATAAA	-16	NA	114281627	114305808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27589.nic	chr13	+	2214	9	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	321	9	-3	0	3prime_fragment	FALSE	canonical	3	251	junction_2	81.1918060828801	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	245	False	NA	-1	True	AATAAA	-16	NA	114281921	114305808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_2759.known	chr1	+	2109	6	FSM	ENSG00000187801.15	ENST00000411995.6	2109	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.54312667664022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	12	True	NA	15	True	ATTAAA	-20	NA	40450106	40463718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
transcript_27596.nic	chr13	+	2180	8	ISM	ENSG00000169062.15	ENST00000351487.5	2235	9	229	0	-68	0	3prime_fragment	FALSE	canonical	3	222	junction_2	82.5936697678114	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	180	False	NA	-1	True	AATAAA	-16	NA	114281856	114305808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_27598.nic	chr13	+	852	7	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-15	14073	-15	0	5prime_fragment	FALSE	canonical	3	172	junction_1	116.141317176772	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	-14	True	NA	53	True	AAAAAG	-35	NA	114281585	114291744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_2760.known	chr1	+	2382	5	FSM	ENSG00000187801.15	ENST00000469416.1	2382	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTTCCCAACTCTTAA	7	True	NA	11	True	ATTAAA	-16	NA	40450101	40463714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457440_40462420
transcript_27605.nic	chr13	+	2019	7	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	153.39319483674	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	180	False	NA	-1	True	AATAAA	-16	NA	114281856	114305808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114301730_114302026_114304788
transcript_27606.nnic	chr13	+	2026	7	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	148.252506068382	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	227	False	NA	-1	True	AATAAA	-16	NA	114281903	114305808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr13_+_114282128_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_2761.nnic	chr1	+	2057	5	NNC	ENSG00000187801.15	novel	2109	6	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	10.6858551365813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	-19	True	NA	15	True	ATTAAA	-20	NA	40450075	40463718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_40450176_40450655_40451089_40456944_40457072_40457340_40457440_40462420
transcript_27612.known	chr13	+	699	6	FSM	ENSG00000169062.15	ENST00000484246.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	157.83966548368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAATTGCAGAGAAA	11	True	NA	66	True	GATAAA	-2	NA	114281644	114291757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_27614.nic	chr13	+	682	6	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	329	14073	5	0	internal_fragment	FALSE	canonical	3	251	junction_2	95.2504068232782	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	253	False	NA	53	True	AAAAAG	-35	NA	114281929	114291744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_2762.nic	chr1	+	2054	5	NIC	ENSG00000187801.15	novel	2109	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	8.27647267862342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	-19	True	NA	15	True	ATTAAA	-20	NA	40450075	40463718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_40450176_40450655_40451089_40456944_40457072_40457343_40457440_40462420
transcript_27646.known	chr13	+	494	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	3	True	NA	NA	False	AATAAA	-16	NA	114281602	114282270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr13_+_114281847_114282020
transcript_27648.known	chr14	-	4737	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	13.3175832901979	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTTCATTTTCTT	-1	True	NA	1	True	TATAAA	-34	NA	20305951	20286226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
transcript_2765.known	chr1	+	1976	5	FSM	ENSG00000187801.15	ENST00000484445.5	1976	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.0096118312577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACGAACATTAAAA	12	True	NA	-23	True	NA	NA	NA	40450106	40463680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40450176_40450664_40451089_40456944_40457072_40457343_40457440_40462420
transcript_27652.known	chr14	-	682	3	FSM	ENSG00000136319.12	ENST00000557379.1	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAGATGGCAGCAAGAA	-3	True	NA	NA	False	AAGAAA	-40	NA	20305953	20300336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20300819_20301832_20301966_20305886
transcript_27657.known	chr14	-	1294	8	FSM	ENSG00000100814.18	ENST00000556854.5	1294	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	220.227711466925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAGATGGAGATTTTC	9997	False	NA	NA	False	AATACA	-18	NA	20333303	20311703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20315484_20315619_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_2766.known	chr1	-	605	2	FSM	ENSG00000238287.1	ENST00000450713.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCGGGTTCAAGCGAT	-2	True	NA	NA	False	NA	NA	NA	40508661	40493156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40493689_40508588
transcript_27660.known	chr14	-	1686	8	FSM	ENSG00000100814.18	ENST00000437553.6	1686	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	224.943711780053	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-1	True	NA	-10	True	AATAAA	-22	NA	20333312	20311367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317793_20317975_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_27669.known	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	183.496972424312	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	301	False	NA	-10	True	AATAAA	-22	NA	20333010	20311367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
transcript_2767.known	chr1	+	1899	4	FSM	ENSG00000164002.12	ENST00000415550.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	7.84573486395988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAACTGATGGTTTTT	0	True	NA	11	True	AATAAA	-19	NA	40508766	40516038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508909_40509450_40509626_40509732_40509791_40514514
transcript_27670.known	chr14	-	1470	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	119.686627861632	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	3	True	NA	-12	True	AATAAA	-20	NA	20333279	20311369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_27678.known	chr14	-	1305	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	196.419347315889	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-1	True	NA	-10	True	AATAAA	-22	NA	20333312	20311367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
transcript_2768.known	chr1	+	1691	3	FSM	ENSG00000164002.12	ENST00000443729.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	10	False	NA	9	True	AATAAA	-17	NA	40508797	40516036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508909_40509732_40509791_40514514
transcript_2769.known	chr1	+	1677	2	FSM	ENSG00000164002.12	ENST00000420209.2	1677	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	13	True	NA	9	True	AATAAA	-17	NA	40508753	40516036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508909_40514514
transcript_27690.known	chr14	+	1827	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_8	31.1508159336691	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	10	True	NA	14	True	AATAAA	-16	NA	20343634	20357904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_27692.nic	chr14	+	1824	16	NIC	ENSG00000129484.14	novel	1827	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	80.6372949281741	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	-13	True	NA	14	True	AATAAA	-16	NA	20343611	20357904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354834_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_27693.known	chr14	+	1886	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	85.702482785247	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	-10	True	NA	14	True	AATAAA	-16	NA	20343614	20357904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_2772.known	chr1	+	1625	2	FSM	ENSG00000164002.12	ENST00000418186.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	8	False	NA	9	True	AATAAA	-17	NA	40508774	40516036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508878_40514514
transcript_27720.known	chr14	-	638	1	FSM	ENSG00000259001.3	ENST00000554988.1	638	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACGAAACCGGGC	NA	False	NA	NA	False	NA	NA	NA	20343685	20343047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20343000_20343700
transcript_27728.known	chr14	-	1976	11	FSM	ENSG00000092094.11	ENST00000206542.9	1976	11	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_6	18.0177690072883	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCTACTCCGTATACT	8	True	NA	NA	False	NA	NA	NA	20454812	20446400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454568
transcript_2773.known	chr1	+	2567	2	FSM	ENSG00000164002.12	ENST00000372703.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGAACTGATGGTTTT	6	True	NA	10	True	AATAAA	-18	NA	40508746	40516037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40509791_40514514
transcript_2774.known	chr1	+	1697	3	FSM	ENSG00000164002.12	ENST00000296380.9	1697	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	-6	True	NA	9	True	AATAAA	-17	NA	40508760	40516036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40508878_40509732_40509791_40514514
transcript_27750.known	chr14	-	1011	2	FSM	ENSG00000092094.11	ENST00000556439.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACTCCATCTCAATTT	-16	True	NA	NA	False	NA	NA	NA	20455089	20451958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20452449_20454568
transcript_27751.known	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	77.454646227468	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	11	False	NA	-16	True	AATAAA	-17	NA	20461465	20457857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
transcript_27752.known	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	56.1735900777422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-3	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
transcript_27758.known	chr14	+	899	5	FSM	ENSG00000100823.12	ENST00000553681.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_1	916.628162070095	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTGGACTTATATGA	10	False	NA	NA	False	NA	NA	NA	20455200	20457342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455241_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_2776.known	chr1	+	1028	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	16.9926454679664	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGCCAGGCTGATT	16	True	NA	NA	False	NA	NA	NA	40531662	40545037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_27760.known	chr14	+	1453	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	323.839755897882	2614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	-9	True	NA	18	True	AATAAA	-15	NA	20455225	20457767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27762.known	chr14	+	952	5	FSM	ENSG00000100823.12	ENST00000555839.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	851.872202856743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCGATCCAAGAATGTTG	4	True	NA	NA	False	NA	NA	NA	20455238	20457366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20457077
transcript_27764.known	chr14	+	1387	5	FSM	ENSG00000100823.12	ENST00000398030.8	1387	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	951.061085051849	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	-9	True	NA	18	True	AATAAA	-15	NA	20455225	20457767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455329_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27765.known	chr14	+	1437	5	FSM	ENSG00000100823.12	ENST00000555414.5	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	808.280698458153	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCGTGTCTTACCC	0	True	NA	23	True	AATAAA	-20	NA	20455190	20457772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455339_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27769.known	chr14	+	773	5	FSM	ENSG00000100823.12	ENST00000556054.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_1	916.628162070095	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGAGGTCTGGTACGA	12	True	NA	NA	False	NA	NA	NA	20455246	20457074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455429_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_2777.known	chr1	+	2019	5	FSM	ENSG00000117010.17	ENST00000372699.8	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	9.54921462739214	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	-10	True	NA	5	True	AATAAA	-17	NA	40531636	40548167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_27773.known	chr14	+	640	5	FSM	ENSG00000100823.12	ENST00000557592.5	640	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1034.23147795839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCGCAAGTTCCTG	13	True	NA	NA	False	NA	NA	NA	20455247	20457119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455339_20455734_20455774_20455913_20456102_20456667_20456861_20456990
transcript_27776.known	chr14	+	898	4	FSM	ENSG00000100823.12	ENST00000555306.5	898	4	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	306.765201561209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAGGAAGGCCGGGTG	-9	True	NA	NA	False	NA	NA	NA	20455225	20457002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455395_20455577_20456102_20456667_20456861_20456990
transcript_27778.known	chr14	+	831	4	FSM	ENSG00000100823.12	ENST00000557365.1	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	971.559685362779	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTAGGCACCTCTAC	22	True	NA	NA	False	NA	NA	NA	20455256	20457302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455395_20455913_20456102_20456667_20456861_20456990
transcript_27780.known	chr14	+	654	4	FSM	ENSG00000100823.12	ENST00000554813.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	996.967513122781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCTGGCTTCCCGAAA	-20	True	NA	NA	False	NA	NA	NA	20455214	20457139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455339_20455913_20456102_20456667_20456861_20456990
transcript_27783.known	chr14	+	1603	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_2	117.995291808143	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCCACATGAAAATAAAG	-9	True	NA	-15	True	TTTAAA	-39	NA	20455225	20457734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
transcript_27784.known	chr14	+	1803	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	74	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	5	True	NA	-11	True	TTTAAA	-43	NA	20455239	20457738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20456102_20456667_20456861_20456990
transcript_27790.known	chr14	+	1477	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	30.2416930742973	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	-1	True	NA	57	True	AATAAA	-17	NA	20469405	20477089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
transcript_27794.known	chr14	+	1635	5	FSM	ENSG00000198805.12	ENST00000554056.5	1635	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	28.7608675112556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGTCAGAATAAAGAGAA	7	True	NA	26	True	NA	NA	NA	20469413	20477058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20469536_20472307_20472478_20474471_20474949_20475061_20475253_20476383
transcript_27796.known	chr14	+	1222	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTCTCACTGATT	NA	False	NA	26	True	AATAAA	-27	NA	20684176	20694186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20684759_20693546
transcript_27797.known	chr14	+	2061	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-26	True	NA	NA	False	ATTAAA	-22	NA	20684559	20701216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20684759_20699354
transcript_27798.known	chr14	+	932	2	FSM	ENSG00000181562.5	ENST00000326842.3	932	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGCTTATATATGTTA	-3	True	NA	NA	False	AATAAA	-19	NA	20745886	20748380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20745993_20747554
transcript_27799.known	chr14	+	844	2	FSM	ENSG00000169413.3	ENST00000304677.3	844	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTGTTTGAGATCC	-2	True	NA	NA	False	AATAAA	-23	NA	20781267	20782467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20781339_20781694
transcript_27800.known	chr14	-	878	3	FSM	ENSG00000129538.14	ENST00000340900.3	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCTAGGTACTGTT	10	False	NA	4	True	AATAAA	-31	NA	20802855	20801345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_20802094_20802248_20802320_20802796
transcript_27802.known	chr14	+	1529	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	138.651408279006	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	14	True	NA	-2	True	AATAAA	-5	NA	20990002	20997016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_27806.known	chr14	+	1539	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_13	81.8069599620035	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	-9	True	NA	17	True	AATAAA	-24	NA	20989979	20997035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_27807.known	chr14	+	1500	14	FSM	ENSG00000165792.18	ENST00000556670.6	1500	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_13	157.842105211236	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	-2	True	NA	12	True	AATAAA	-19	NA	20989986	20997030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996811
transcript_2781.known	chr1	+	562	4	FSM	ENSG00000117010.17	ENST00000465152.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	22.365648262955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAATAGAAGTTATACT	6	True	NA	NA	False	TATAAA	-41	NA	40531652	40546765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40531788_40540585_40540713_40541614_40541711_40546561
transcript_27810.known	chr14	+	1605	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	135.274489464939	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	5	True	NA	-8	True	NA	NA	NA	20989993	20997010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_27815.known	chr14	+	1586	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	62.3698645180507	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	-9	True	NA	-9	True	NA	NA	NA	20989979	20997009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_2782.known	chr1	-	7259	8	FSM	ENSG00000117016.10	ENST00000372684.8	7259	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	8.0609919883805	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTGTTGCTTTCTGT	9	True	NA	-3	True	ATTAAA	-17	NA	40665682	40620679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647843_40665393
transcript_27821.nic	chr14	+	1882	12	NIC	ENSG00000165792.18	novel	1605	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	139	junction_3	140.009798948691	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	-9	True	NA	-8	True	NA	NA	NA	20989979	20997010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20995234_20995900_20995952_20996208_20996293_20996526
transcript_27834.known	chr14	+	2887	10	FSM	ENSG00000165792.18	ENST00000555640.6	2887	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	154.438369185068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTTTAATAATAAATAA	5	True	NA	-23	True	NA	NA	NA	20989993	20996995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20994064_20994542_20994614_20994793_20995234_20995900_20996293_20996526
transcript_2784.known	chr1	+	1536	11	FSM	ENSG00000066136.21	ENST00000425457.6	1536	11	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_8	102.68417599611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATATTTCTCCTTTTG	-2	True	NA	37	True	ATTAAA	-38	NA	40691715	40771139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770708
transcript_27845.known	chr14	-	2079	17	FSM	ENSG00000165795.25	ENST00000397853.7	2079	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_16	48.0245705342588	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9711	False	NA	-11	True	AATAAA	-17	NA	21025094	21016771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025028
transcript_27847.nnic	chr14	-	2226	17	NNC	ENSG00000165795.25	novel	2079	17	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	55.6074410488381	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9309	False	NA	-11	True	AATAAA	-17	NA	21025496	21016771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025283
transcript_27848.nic	chr14	-	2156	17	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_16	52.1508853592151	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9269	False	NA	-11	True	AATAAA	-17	NA	21025536	21016771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025393
transcript_27850.known	chr14	-	2122	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	51.3516902715967	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	9029	False	NA	-2	True	AATAAA	-26	NA	21025776	21016762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
transcript_27854.known	chr14	-	2022	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_15	50.6173444142969	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	9700	False	NA	-12	True	AATAAA	-16	NA	21025105	21016772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
transcript_27856.known	chr14	-	2054	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	52.9815900940024	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGTCTAGGTGT	9029	False	NA	-3	True	AATAAA	-25	NA	21025776	21016763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_27858.known	chr14	-	2162	16	FSM	ENSG00000165795.25	ENST00000553503.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_15	59.8917542089245	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9766	False	NA	-11	True	AATAAA	-17	NA	21025039	21016771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21024848
transcript_27859.nic	chr14	-	2038	16	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_15	53.1927313330183	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9710	False	NA	-11	True	AATAAA	-17	NA	21025095	21016771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025028
transcript_2786.nic	chr1	+	2283	10	NIC	ENSG00000066136.21	novel	1955	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	72.6265604579386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	28	False	NA	24	True	AATAAA	-16	NA	40691687	40771603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_27863.known	chr14	-	2127	16	FSM	ENSG00000165795.25	ENST00000350792.7	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	56.377142728434	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	8982	False	NA	-2	True	AATAAA	-26	NA	21025823	21016762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025676
transcript_27866.known	chr14	-	2084	16	FSM	ENSG00000165795.25	ENST00000397847.6	2084	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.5091291763195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	8957	False	NA	-12	True	AATAAA	-16	NA	21025848	21016772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018795_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_27869.known	chr14	-	1980	15	FSM	ENSG00000165795.25	ENST00000554143.5	1980	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	56.1126781847135	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	9700	False	NA	-12	True	AATAAA	-16	NA	21025105	21016772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025028
transcript_2787.known	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	84.0860817008527	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	25	True	NA	22	True	AATAAA	-14	NA	40691742	40771601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
transcript_27870.known	chr14	-	2047	15	FSM	ENSG00000165795.25	ENST00000360463.7	2047	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	58.3826662142602	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	8986	False	NA	-11	True	AATAAA	-17	NA	21025819	21016771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025676
transcript_27876.known	chr14	+	1526	8	FSM	ENSG00000232070.9	ENST00000418511.6	1526	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.56696210375594	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGCTGTTGGATGTGCT	102	False	NA	15	True	AATAAA	-20	NA	21098936	21103724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21099199_21101076_21101185_21101307_21101452_21101864_21101976_21102063_21102121_21102404_21102516_21102632_21102780_21103138
transcript_27882.known	chr14	+	794	3	FSM	ENSG00000165801.10	ENST00000557498.1	794	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTCTGAGGTGTCACA	2067	False	NA	NA	False	NA	NA	NA	21087752	21089414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21088099_21088829_21088877_21089013
transcript_27883.known	chr14	-	2513	1	FSM	ENSG00000165804.16	ENST00000624093.1	2513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTCTGCCTCATATT	421	False	NA	NA	False	ATTAAA	-16	NA	21104216	21101703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21101700_21104200
transcript_27884.known	chr14	+	358	2	FSM	ENSG00000178107.2	ENST00000320322.2	358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGTATTTTATCAA	4126	False	NA	NA	False	AATAAA	-23	NA	21108042	21116703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21108160_21116462
transcript_27898.known	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	2639.84309765693	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	5	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
transcript_2791.known	chr1	+	2363	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	92.0962995731193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	11	True	NA	24	True	AATAAA	-16	NA	40709356	40771603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_27916.known	chr14	-	1714	9	FSM	ENSG00000092199.19	ENST00000555309.5	1714	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	2427.08718168507	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	9	True	NA	-92	True	NA	NA	NA	21269421	21210612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
transcript_2792.known	chr1	+	1202	10	FSM	ENSG00000066136.21	ENST00000372651.5	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	71.5227668147668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGGACACTGGTGCAC	60	False	NA	NA	False	NA	NA	NA	40709542	40770940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_27922.known	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	2080.07998644283	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	52	False	NA	-92	True	NA	NA	NA	21269404	21210612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_27942.nic	chr14	-	1751	8	NIC	ENSG00000092199.19	novel	3165	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	1921	junction_7	1694.30581775594	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	-1	True	NA	-29	True	AATAAA	-36	NA	21269457	21210549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_27944.known	chr14	-	1156	8	FSM	ENSG00000092199.19	ENST00000556628.5	1156	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2329.20444507106	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGTTATGCAG	46	False	NA	5	True	AATAAA	-33	NA	21269410	21210922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21234077_21234230_21263310_21263337_21269297
transcript_27946.known	chr14	-	1790	8	FSM	ENSG00000092199.19	ENST00000553753.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	4459	junction_7	927.078734300295	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATTAAACCAGGAAT	53	False	NA	-61	True	AATAAA	-4	NA	21269403	21210581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_27951.known	chr14	-	1371	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_5	2312.16265051769	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	5	True	NA	-9	True	AATAAA	-19	NA	21269425	21210936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
transcript_2796.known	chr1	+	1455	11	FSM	ENSG00000066136.21	ENST00000372654.5	1455	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.468381167038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATATTTATGGCATTTT	58	False	NA	0	True	ATTAAA	-9	NA	40691837	40771102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40691868_40712686_40712822_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_27960.known	chr14	-	3301	7	FSM	ENSG00000092199.19	ENST00000336053.10	3301	7	0	0	0	0	multi-exon	FALSE	canonical	3	1921	junction_6	1737.71091445678	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTAACTTTTTTTATT	NA	False	NA	0	True	ATTAAA	-31	NA	21269494	21209135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_2797.known	chr1	+	4006	19	FSM	ENSG00000171793.16	ENST00000648020.1	4006	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	120.562570200429	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGAGACATGCTTTG	25	True	NA	NA	False	AATAAA	-11	NA	40979717	41012554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_40999829_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_27976.known	chr14	-	1252	8	FSM	ENSG00000092199.19	ENST00000556897.5	1252	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	2287.77931717236	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAATAAAAAGGATGTA	6779	False	NA	-38	True	NA	NA	NA	21262677	21210965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21262600
transcript_27979.known	chr14	-	4433	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_10	155.60690987228	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-11	True	NA	-10	True	AATAAA	-32	NA	21384019	21351475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_2798.known	chr1	+	2840	19	FSM	ENSG00000171793.16	ENST00000650070.2	2840	19	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_11	25.1553813303743	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	3	True	NA	NA	False	AATAAA	-22	NA	40979695	41012565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_27987.nic	chr14	-	1678	12	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-203	11769	-203	6104	5prime_fragment	FALSE	canonical	3	1760	junction_1	115.184293580346	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAACAAGAGTAAGTTT	NA	False	NA	28	True	NA	NA	NA	21384222	21363244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_27990.nic	chr14	-	1416	11	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-25	11962	-25	5911	5prime_fragment	FALSE	canonical	3	1785	junction_6	108.497741911986	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGGAAGAAGATAGATAAG	-6	True	NA	0	True	AAGAAA	-28	NA	21384044	21363437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_27995.nic	chr14	-	1205	9	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-3	13604	-3	4269	5prime_fragment	FALSE	canonical	3	1785	junction_4	108.505112206753	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGAAAGGTAAGTTTCA	-14	True	NA	NA	False	AATACA	-3	NA	21384022	21365079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_27998.known	chr14	-	888	3	FSM	ENSG00000092201.10	ENST00000555752.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTGTCACTGTTGTCT	-5	True	NA	NA	False	NA	NA	NA	21384013	21372074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21372718_21373337_21373431_21383861
transcript_27999.nic	chr14	-	416	3	ISM	ENSG00000092201.10	ENST00000556217.5	1027	5	-9	2444	0	195	5prime_fragment	FALSE	canonical	3	1889	junction_1	74.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTCAGGATTAATAA	-11	True	NA	-1	True	NA	NA	NA	21384019	21371879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_21372045_21373337_21373431_21383861
transcript_28.known	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00076_+_0_600
transcript_28001.known	chr14	-	915	2	FSM	ENSG00000092201.10	ENST00000555943.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTGAGAAAAATGATCA	-9	True	NA	0	True	AATAAA	-23	NA	21383981	21382974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21383770_21383861
transcript_28004.known	chr14	-	8467	38	FSM	ENSG00000100888.15	ENST00000646647.2	8467	38	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_36	23.7391165328845	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTCTTCCTTTGTTCT	-29	True	NA	-30	True	AATAAA	-16	NA	21456123	21385198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21456031
transcript_28009.known	chr14	-	1980	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	75.923382432555	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-9	True	NA	-25	True	AATAAA	-21	NA	21511340	21498137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_2801.nic	chr1	+	1979	18	ISM	ENSG00000171793.16	ENST00000650070.2	2840	19	-43	2307	-35	669	5prime_fragment	FALSE	canonical	3	459	junction_11	25.5182952213399	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTACTTTAAAGTTTTAG	336	False	NA	12	True	AATAAA	-24	NA	40979652	41010258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160
transcript_2802.known	chr1	+	2855	18	FSM	ENSG00000171793.16	ENST00000498694.2	2855	18	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_11	25.5088016562463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	48	False	NA	NA	False	AATAAA	-3	NA	40979740	41012546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_28024.known	chr14	-	2030	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	147.916225873104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-9	True	NA	-49	True	TTTAAA	-1	NA	21511340	21498161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
transcript_28027.known	chr14	+	4514	9	FSM	ENSG00000092203.15	ENST00000448790.7	4514	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	42.703739590345	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATTGCAATTCTAGC	-24	True	NA	20	True	AATAAA	-22	NA	21477194	21499170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
transcript_2803.known	chr1	+	2648	18	FSM	ENSG00000171793.16	ENST00000648914.1	2648	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	121.616505435996	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATAGCTACGTGGCAC	12	True	NA	NA	False	NA	NA	NA	40979704	41012479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_28032.known	chr14	-	1318	9	FSM	ENSG00000129472.15	ENST00000649801.1	1318	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	15.0950115932383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATATGTCTATTTATA	26	True	NA	NA	False	NA	NA	NA	21476909	21459667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21460341_21461238_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_28034.nnic	chr14	-	2304	9	NNC	ENSG00000129472.15	novel	2914	8	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0950115932383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	NA	False	NA	-5	True	ATTAAA	-22	NA	21476981	21459019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_21460346_21460977_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_28042.known	chr14	-	2124	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	153.692824734924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTAAATAAACATTT	21	True	NA	-60	True	NA	NA	NA	21511310	21498172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
transcript_28043.nic	chr14	-	2291	9	NIC	ENSG00000165819.12	novel	2030	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	350	junction_6	63.0396700498979	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGGATTCTGAAGTCCA	-40	True	NA	-33	True	AATAAA	-13	NA	21511371	21498145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_2805.known	chr1	+	2019	17	FSM	ENSG00000171793.16	ENST00000480420.6	2019	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	125.313840391834	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTTATTATGCGGA	-5	True	NA	NA	False	TTTAAA	-15	NA	40979687	41011754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_28052.nnic	chr14	-	2264	8	NNC	ENSG00000129472.15	novel	2914	8	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.119452059356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	221	False	NA	-5	True	ATTAAA	-22	NA	21476714	21459019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_21460346_21460977_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527
transcript_28064.known	chr14	+	4711	10	FSM	ENSG00000092203.15	ENST00000613569.4	4711	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	143.756738972474	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCAATTCTAGCCCTTT	NA	False	NA	25	True	AATAAA	-27	NA	21476754	21499175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21476874_21477121_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
transcript_28065.known	chr14	+	3633	7	FSM	ENSG00000092203.15	ENST00000613005.4	3633	7	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_4	47.2710858300881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGAATGTAGCGG	-37	True	NA	NA	False	NA	NA	NA	21477181	21496227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21477285_21477495_21477565_21487450_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228
transcript_28074.known	chr14	+	3766	6	FSM	ENSG00000092203.15	ENST00000673643.1	3766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.200836818252	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGCAATTCTAGCC	-1	True	NA	21	True	AATAAA	-23	NA	21477217	21499171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_21477285_21477495_21477565_21487450_21487647_21492613_21493258_21495228_21495393_21496545
transcript_28083.nic	chr14	+	581	3	ISM	ENSG00000092203.15	ENST00000494242.1	650	4	-24	822	6	193	5prime_fragment	FALSE	canonical	3	438	junction_1	43	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATTGTACAATGTCT	-10	True	NA	NA	False	AATAAA	-40	NA	21477208	21487886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_21477285_21477495_21477565_21487450
transcript_28085.known	chr14	-	1553	3	FSM	ENSG00000165819.12	ENST00000538267.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	63.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCTCTTATCTGAAG	2	True	NA	NA	False	NA	NA	NA	21511259	21502378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21503578_21503663_21503882_21511123
transcript_28087.known	chr14	-	802	2	FSM	ENSG00000165819.12	ENST00000367606.7	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTTGCCCAGGCTGG	-9	True	NA	NA	False	AATAAA	-13	NA	21511340	21507650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21508236_21511123
transcript_28089.nic	chr14	-	4364	3	NIC	ENSG00000165821.12	novel	3094	4	NA	NA	-9	0	intron_retention	FALSE	canonical	3	66	junction_1	283	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-6	True	NA	-3	True	ATTAAA	-16	NA	21537225	21521079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_21522245_21522832_21525655_21536848
transcript_2809.known	chr1	+	1607	13	FSM	ENSG00000171793.16	ENST00000463285.6	1607	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	143.659391733828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAGCAGTTTGACTTT	5	True	NA	NA	False	AATAAA	-15	NA	40979757	41004250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41003980
transcript_28090.known	chr14	-	1466	3	FSM	ENSG00000165821.12	ENST00000611430.4	1466	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	157.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAGTGTGCAGAGGTG	9886	False	NA	NA	False	NA	NA	NA	21526500	21521536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21522245_21525336_21525655_21526060
transcript_28091.known	chr14	-	1566	3	FSM	ENSG00000165821.12	ENST00000613414.4	1566	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	308	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTATGTGTTTCTCC	4	True	NA	-6	True	ATTAAA	-13	NA	21536934	21521082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21522245_21525336_21525655_21536848
transcript_28092.known	chr14	-	4861	2	FSM	ENSG00000165821.12	ENST00000537235.2	4861	2	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	6	True	NA	-3	True	ATTAAA	-16	NA	21526346	21521079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21525655_21526060
transcript_28093.known	chr14	-	4942	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATGTGTTTCTCCTT	3	True	NA	-4	True	ATTAAA	-15	NA	21537216	21521080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_21525655_21536848
transcript_28099.known	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1746	junction_2	46	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-27	True	NA	-12	True	ATTAAA	-20	NA	22589224	22564906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22565138_22575058_22575234_22588946
transcript_28100.known	chr14	-	441	2	FSM	ENSG00000129562.11	ENST00000538631.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGCCTCTGGCTCTGT	40	True	NA	-13	True	ATTAAA	-45	NA	22589157	22564907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22565138_22588946
transcript_28101.known	chr14	-	591	3	FSM	ENSG00000129562.11	ENST00000535847.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	918.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-23	True	NA	-12	True	ATTAAA	-20	NA	22589220	22564906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22565138_22575058_22575234_22589035
transcript_28109.known	chr14	+	3366	7	FSM	ENSG00000100439.11	ENST00000428304.7	3051	7	-63	-252	-53	252	multi-exon	FALSE	canonical	3	183	junction_1	30.4671954731642	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTCTTCTCTGA	8732	False	NA	NA	False	AATATA	-25	NA	22598236	22613215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_28110.known	chr14	+	1003	6	FSM	ENSG00000100439.11	ENST00000418446.6	1003	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.6787737014567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAACAGGACGACAGTG	20	True	NA	NA	False	NA	NA	NA	22598303	22611074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22606421_22606534_22609723_22609911_22610858
transcript_28114.known	chr14	+	2806	10	FSM	ENSG00000155463.14	ENST00000612549.6	2806	10	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_5	38.0529196167393	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAAGTGTTCTGTTGTCT	-3	True	NA	NA	False	NA	NA	NA	22766687	22773042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_2812.known	chr1	-	363	2	FSM	ENSG00000010803.16	ENST00000488592.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAATTTTCCAGATTG	156	False	NA	NA	False	NA	NA	NA	41242154	41185983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_41186251_41242058
transcript_28124.known	chr14	+	1679	9	FSM	ENSG00000155463.14	ENST00000495424.5	1679	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	266.573131382366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGAGTTAGTAAACCT	12	True	NA	-5	True	NA	NA	NA	22766702	22771754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769796_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_28134.known	chr14	-	2272	11	FSM	ENSG00000155465.20	ENST00000555702.5	2272	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	7.93977329651168	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	9997	False	NA	-3	True	AATAAA	-17	NA	22819811	22773221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22819637
transcript_28135.nnic	chr14	-	2195	11	NNC	ENSG00000155465.20	novel	2272	11	NA	NA	548	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	7.93977329651168	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	7393	False	NA	-3	True	AATAAA	-17	NA	22822415	22773221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22822318
transcript_28140.nic	chr14	+	514	6	NIC	ENSG00000172590.18	novel	586	5	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	3	59	junction_4	749.600053361791	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	NA	False	NA	24	True	AATAAA	-26	NA	22829870	22834347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_22829941_22830049_22830111_22830186_22830255_22830963_22831038_22833417_22833483_22834171
transcript_28145.known	chr14	+	1042	5	FSM	ENSG00000172590.18	ENST00000311892.10	1042	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	785.763442455807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGCACAGTTTAGGCC	23	False	NA	-48	True	NA	NA	NA	22829915	22834977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22830963_22831038_22834171
transcript_28146.known	chr14	+	398	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	679.937680967896	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	28	False	NA	24	True	AATAAA	-26	NA	22829920	22834347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
transcript_2815.nic	chr1	-	432	3	ISM	ENSG00000198815.9	ENST00000445886.5	1326	8	38	87021	32	-13496	5prime_fragment	FALSE	canonical	3	175	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGACTTTAAGTGAAA	-1	True	NA	NA	False	NA	NA	NA	42335183	42278426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_42278673_42311049_42311111_42335058
transcript_28150.known	chr14	+	333	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	731.407015431369	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	20	False	NA	24	True	AATAAA	-26	NA	22829912	22834347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
transcript_28153.known	chr14	+	362	4	FSM	ENSG00000172590.18	ENST00000556654.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	712.082860347025	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	-6	True	NA	23	True	AATAAA	-25	NA	22829886	22834346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22829941_22830186_22830255_22833417_22833483_22834171
transcript_28155.known	chr14	+	3701	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	0	0	0	0	multi-exon	TRUE	canonical	2	47	junction_5	7.09372875533883	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	-16	True	NA	13	True	AATAAA	-13	NA	22836584	22847758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_2816.known	chr1	-	5309	13	FSM	ENSG00000198815.9	ENST00000372573.5	5309	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_12	48.2950279244378	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTGGTCTCCGTTGTTT	3	True	NA	-3	True	AATAAA	-28	NA	42335877	42176538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335625
transcript_28162.nic	chr14	-	2067	18	NIC	ENSG00000100462.16	novel	2304	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	192.670847206633	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-14	True	NA	-5	True	AATAAA	-20	NA	22929395	22920528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_22920732_22920987_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_28164.known	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_16	200.107432083369	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-20	True	NA	-1	True	AATAAA	-24	NA	22929401	22920524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
transcript_28165.known	chr14	-	2304	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_14	62.9522388402509	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	5	True	NA	-5	True	AATAAA	-20	NA	22929376	22920528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_28167.known	chr14	-	1857	16	FSM	ENSG00000100462.16	ENST00000553897.5	1857	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	211.239979381008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGCTTCAGGTTCTGC	NA	False	NA	NA	False	NA	NA	NA	22929408	22920875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929251
transcript_2817.known	chr1	+	10577	5	FSM	ENSG00000177181.15	ENST00000431473.4	10577	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	11.9660979437743	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTTTGCAATTTACT	-10	True	NA	NA	False	ATTAAA	-19	NA	42380791	42424232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410188_42414483
transcript_28173.known	chr14	-	10007	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	59.8731400496774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGGAGTGAGGGTTT	1	True	NA	NA	False	AATAAA	-19	NA	22919149	22893203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
transcript_28179.known	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	32.9363864981506	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	7245	False	NA	-32	True	CATAAA	-41	NA	22919182	22900765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_28184.known	chr14	-	1743	12	FSM	ENSG00000100461.18	ENST00000542016.6	1743	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	66.8529903149409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAAGGAAAACCCTTAG	7249	False	NA	NA	False	NA	NA	NA	22919178	22901335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22911327_22911404_22918998
transcript_2819.known	chr1	+	685	2	FSM	ENSG00000186409.18	ENST00000468651.2	685	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTGTAGACCTTTTTT	6721	False	NA	37	True	ATTAAA	-39	NA	42463268	42473417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42463658_42473121
transcript_28191.nic	chr14	-	1807	10	NIC	ENSG00000092036.19	novel	1642	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	37	junction_9	80.367827234043	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-8	True	NA	-32	True	AATAAA	-12	NA	22957149	22946235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_28193.known	chr14	-	1586	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_9	52.635011583968	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-6	True	NA	-24	True	AATAAA	-20	NA	22957090	22946227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_28196.known	chr14	-	1626	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	98.2837092299634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTATCTCCTGAAT	4	True	NA	-66	True	NA	NA	NA	22957137	22946269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_28197.known	chr14	-	1454	9	FSM	ENSG00000092036.19	ENST00000555367.5	1454	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	75.7511344799535	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-6	True	NA	-57	True	NA	NA	NA	22957126	22946260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_2820.known	chr1	+	966	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	302.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGATATGATGTCA	14	False	NA	NA	False	NA	NA	NA	42456116	42460081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42456500_42457246_42457351_42459602
transcript_28207.nic	chr14	-	1579	9	NIC	ENSG00000100802.15	novel	1949	8	NA	NA	0	-51	intron_retention	FALSE	canonical	2	2	junction_8	13.1029576813787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTCCGCCATGCCC	-4	True	NA	-14	True	AATAAA	-19	NA	23010143	22987195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22998742_22999053_22999157_23000958_23001038_23010100
transcript_28209.known	chr14	-	1949	8	FSM	ENSG00000100802.15	ENST00000397379.7	1949	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	12.8587300607607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCTGAGAAAGCAAAT	11	True	NA	59	True	GGGGCT	-24	NA	23010128	22987122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999157_23000958_23001038_23010100
transcript_2821.nic	chr1	+	1538	3	NIC	ENSG00000127125.9	novel	966	3	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTGTTTGAAAT	-7	True	NA	41	True	AATAAA	-34	NA	42456095	42460415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_42456500_42457246_42457568_42459602
transcript_28211.known	chr14	-	3360	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	10.1598337694188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGTTCGACTTAGGATT	-4	True	NA	NA	False	AATAAA	-37	NA	23010143	22985893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
transcript_28216.known	chr14	-	1986	7	FSM	ENSG00000100802.15	ENST00000397382.8	1986	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	11.1716406832459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGTGCAGTCTGAGAAA	NA	False	NA	53	True	GGGGCT	-18	NA	23010166	22987128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999157_23010016
transcript_2822.known	chr1	+	2269	3	FSM	ENSG00000127125.9	ENST00000372561.4	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	56.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGACTGAAATACTTC	-5	True	NA	11	True	AATAAA	-26	NA	42456542	42461236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42457074_42457246_42457351_42459602
transcript_28220.known	chr14	-	1117	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	1449.53793404044	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	3	True	NA	-7	True	NA	NA	NA	23034890	23025857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
transcript_28223.known	chr14	-	444	3	FSM	ENSG00000100804.19	ENST00000555895.5	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1649	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTTGTTTGTTTGTTT	504	False	NA	-3	True	AATAAA	-16	NA	23034727	23016542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23016636_23033367_23033675_23034683
transcript_28227.known	chr14	-	796	3	FSM	ENSG00000100804.19	ENST00000334454.10	796	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	1731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCATGGATCGGGGCT	8	True	NA	NA	False	NA	NA	NA	23034885	23026296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23033367_23033675_23034475
transcript_28228.known	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3333	junction_2	71.5	3049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-7	True	NA	-5	True	NA	NA	NA	23034900	23025855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23033367_23033675_23034683
transcript_2823.known	chr1	+	641	3	FSM	ENSG00000127125.9	ENST00000471420.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTATCACTGTATA	253	False	NA	5	True	ATTAAA	-20	NA	42456800	42473385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42457074_42457246_42457351_42473121
transcript_28230.known	chr14	-	900	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	1717.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	1	True	NA	-15	True	NA	NA	NA	23035230	23025901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23033367_23033675_23035111
transcript_28232.known	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-1	True	NA	-7	True	NA	NA	NA	23034894	23025857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23026376_23034683
transcript_28234.known	chr14	-	4935	19	FSM	ENSG00000100813.15	ENST00000262710.5	4935	19	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_15	174.659925301063	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	9529	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
transcript_28238.known	chr14	-	2563	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_12	154.709315240622	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	9051	False	NA	-6	True	AATAAA	-17	NA	23071617	23058566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_28241.known	chr14	-	2445	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_11	133.049173784087	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	10	True	NA	-6	True	AATAAA	-17	NA	23071561	23058566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_28245.known	chr14	+	2914	2	FSM	ENSG00000179933.6	ENST00000319074.6	2914	2	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGACTCCATGGATTTGA	-26	True	NA	7	True	AATAAA	-15	NA	23095504	23100456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23095620_23097657
transcript_28247.known	chr14	+	725	2	FSM	ENSG00000179933.6	ENST00000554203.1	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCAATCTAAGCAATCCA	-6	True	NA	NA	False	NA	NA	NA	23095524	23098271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23095620_23097641
transcript_2825.known	chr1	+	984	3	FSM	ENSG00000127125.9	ENST00000372556.3	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	236.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTTTTGTTTGAAA	13	True	NA	40	True	AATAAA	-33	NA	42456560	42460414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42456629_42457246_42457351_42459602
transcript_28250.known	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	2430	junction_2	118.76619889514	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	0	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
transcript_28252.nnic	chr14	-	3148	10	NNC	ENSG00000092068.21	novel	4236	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	836.345489482533	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	0	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165332_23183541
transcript_28254.known	chr14	-	1752	9	FSM	ENSG00000092068.21	ENST00000453702.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	879.768213437494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTCCCCATCATACC	-7	True	NA	NA	False	NA	NA	NA	23154401	23126667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23154258
transcript_28257.known	chr14	+	2145	10	FSM	ENSG00000258643.6	ENST00000678502.1	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	1552.26499583156	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTGTAAGGATTATTTA	-23	True	NA	29	True	AATAAA	-33	NA	23306832	23326175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23319734_23319831_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_28263.known	chr14	+	1811	7	FSM	ENSG00000100836.11	ENST00000216727.9	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_6	227.263430112868	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	-2	True	NA	17	True	AATAAA	-21	NA	23321456	23326163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_28266.nnic	chr14	+	1550	7	NNC	ENSG00000100836.11	novel	1220	6	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	1175.93036452939	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	291	False	NA	17	True	AATAAA	-21	NA	23321933	23326163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_23322037_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_28267.known	chr14	+	1220	6	FSM	ENSG00000100836.11	ENST00000556821.5	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_5	211.823133769662	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAGGAGAGAGAGGAAA	56	False	NA	12	True	AAAAAG	-7	NA	23321542	23325298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_28271.known	chr14	+	778	5	FSM	ENSG00000100836.11	ENST00000557702.5	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	3096	junction_1	106.491783720623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTCCCCGTGGTCTTC	-3	True	NA	NA	False	NA	NA	NA	23322021	23324378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
transcript_28272.known	chr14	+	3526	4	FSM	ENSG00000129473.11	ENST00000250405.10	3526	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.79271573232759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAACAGGGTTTGTGA	-23	True	NA	17	True	AATAAA	-25	NA	23306832	23311751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23308815
transcript_28273.known	chr14	+	762	4	FSM	ENSG00000129473.11	ENST00000557579.2	762	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.4309521329882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTTGGTCTGGATTCC	-23	True	NA	NA	False	NA	NA	NA	23306832	23311144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23310972
transcript_28274.known	chr14	+	3568	4	FSM	ENSG00000129473.11	ENST00000678311.1	3568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.1928941054479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTTTAATGAGAAGGAC	-28	True	NA	1	True	AATAAA	-9	NA	23306827	23311735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23306948_23307191_23307280_23307759_23308200_23308815
transcript_28275.nnic	chr14	-	772	3	Antisense	novelGene_ENSG00000215277.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	10.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCTCAAATTTTCAGAG	19	False	NA	-11	True	AATAAA	-14	NA	23207329	23199106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_23199683_23200703_23200863_23207292
transcript_28277.nnic	chr14	-	1413	3	Antisense	novelGene_ENSG00000215277.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	11	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCTCAAATTTTCAGAG	NA	False	NA	-11	True	AATAAA	-14	NA	23207759	23199106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_23199894_23200703_23200863_23207292
transcript_28279.known	chr14	-	4986	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGATGGAGTCTCGCTC	-18	True	NA	NA	False	NA	NA	NA	23286132	23272421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23277188_23285912
transcript_28282.nic	chr14	-	1312	6	ISM	ENSG00000092096.19	ENST00000397260.7	2245	9	4244	4	-395	0	3prime_fragment	FALSE	canonical	3	222	junction_2	50.7952753708453	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATAGCCTGGACTTCCC	4272	False	NA	-19	True	AATAAA	-22	NA	23348616	23346317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505
transcript_28284.known	chr14	+	1200	5	FSM	ENSG00000166091.21	ENST00000359320.7	1200	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.58113883008419	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGTCTCTTTCTTCC	15	False	NA	NA	False	ATTAAA	-15	NA	23376807	23379772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
transcript_28289.known	chr14	+	1108	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	142.884043895741	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	4	True	NA	13	True	AATAAA	-19	NA	23469702	23478173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_28291.known	chr14	+	2204	10	FSM	ENSG00000129460.16	ENST00000397154.7	2204	10	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	150.612904206712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCCAGCAGACAAGCAG	4	True	NA	NA	False	TATAAA	-28	NA	23469702	23478823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502
transcript_283.known	chr1	-	485	4	FSM	ENSG00000127054.22	ENST00000534345.5	485	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	225.611760922756	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCCAGGTCAGGTTCC	-14	True	NA	NA	False	NA	NA	NA	1324671	1319305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319525_1320455_1320530_1320995_1321097_1324580
transcript_2830.known	chr1	-	1530	8	FSM	ENSG00000066185.13	ENST00000372565.8	1530	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16057691494799	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCTATTCTTAATTCC	6	True	NA	NA	False	AATAAA	-17	NA	42456022	42430328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42430859_42433142_42433289_42435273_42435386_42436420_42436544_42439855_42440026_42448466_42448639_42449917_42450060_42455887
transcript_28302.known	chr14	+	803	3	FSM	ENSG00000129460.16	ENST00000556378.5	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCGGGACCAACCTGG	-10	True	NA	NA	False	NA	NA	NA	23469688	23471609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23469728_23470041_23470102_23470905
transcript_28305.known	chr14	+	270	2	FSM	ENSG00000129460.16	ENST00000557097.5	270	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAACTCCAAAAAGAAAT	0	True	NA	NA	False	NA	NA	NA	23469698	23470282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23469728_23470041
transcript_28309.nic	chr14	-	2606	22	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_21	103.507139324572	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-7	True	NA	-16	True	AATAAA	-33	NA	23567511	23559566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567450
transcript_28311.known	chr14	-	2598	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_21	78.9978902671879	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-16	True	NA	-16	True	AATAAA	-33	NA	23567791	23559566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_28325.nic	chr14	-	2533	21	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	112.493677600121	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	9702	False	NA	-16	True	AATAAA	-33	NA	23567831	23559566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_2834.known	chr1	+	937	11	FSM	ENSG00000171960.12	ENST00000678038.1	937	11	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_9	157.964584638456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCGTATGTTTTTTTT	NA	False	NA	20	True	AATAAA	-8	NA	42658334	42676748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42668046_42668152_42676583
transcript_28353.known	chr14	+	535	3	FSM	ENSG00000259431.6	ENST00000556015.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGAACTCTGGGTCT	-37	True	NA	NA	False	NA	NA	NA	23556270	23558859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23556344_23556742_23557040_23558694
transcript_28354.known	chr14	+	1779	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	3	True	NA	17	True	AATATA	-17	NA	23556006	23559574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23556344_23556742_23557305_23558694
transcript_28355.known	chr14	+	571	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTCAGTGTCCCTTC	-16	True	NA	NA	False	NA	NA	NA	23555987	23558909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23556344_23558694
transcript_28356.known	chr14	+	1595	2	FSM	ENSG00000259431.6	ENST00000554789.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTTCAAATATACCCAA	-14	True	NA	-14	True	NA	NA	NA	23556293	23559543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23557040_23558694
transcript_28357.known	chr14	+	2611	2	FSM	ENSG00000259431.6	ENST00000288014.7	2611	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATGAAATGGGTGACA	-37	True	NA	NA	False	NA	NA	NA	23556270	23560271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23557305_23558694
transcript_28358.known	chr14	-	3298	21	FSM	ENSG00000213983.12	ENST00000308724.9	3298	21	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	73.503333257751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	9928	False	NA	-14	True	AATAAA	-35	NA	23568070	23559564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110
transcript_28361.known	chr14	+	1676	9	FSM	ENSG00000100867.15	ENST00000250383.11	1676	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.6583123951777	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGCATCTGTCAAG	0	True	NA	12	True	AATAAA	-18	NA	23636363	23645639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23643151_23643220_23644110_23644163_23644408_23644544_23644826_23644883_23645141
transcript_28362.known	chr14	-	2830	4	FSM	ENSG00000215256.5	ENST00000671411.1	2830	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.18241233033047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATTTATTTAGTTT	-29	True	NA	-32	True	AATGAA	-24	NA	23954186	23938761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953308_23953420_23953773_23954034_23954124
transcript_28365.known	chr14	-	2759	3	FSM	ENSG00000215256.5	ENST00000555045.2	2759	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	13.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGGCTTCTGAGTTT	891	False	NA	-10	True	AATAAA	-15	NA	23954204	23938739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953773_23954034_23954124
transcript_28368.known	chr14	-	2852	2	FSM	ENSG00000215256.5	ENST00000556379.2	2859	2	7	0	-4	0	multi-exon	FALSE	canonical	3	44	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGTTTTGTGTCATG	898	False	NA	-1	True	AATAAA	-24	NA	23954197	23938730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953773
transcript_28369.known	chr14	-	1492	2	FSM	ENSG00000215256.5	ENST00000553454.1	1492	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCACAAGCCTCACCAAAG	973	False	NA	NA	False	AATAAA	-8	NA	23954122	23940215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_23941159_23953573
transcript_2837.known	chr1	+	923	11	FSM	ENSG00000171960.12	ENST00000372550.6	923	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	160.326198732459	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	NA	False	NA	29	True	AATAAA	-17	NA	42658334	42676757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675366_42675449_42676583
transcript_28374.known	chr14	+	1264	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	64.378028955886	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	16	True	NA	NA	False	AATAAA	-31	NA	23953769	23969279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_28378.known	chr14	+	1143	7	FSM	ENSG00000157326.19	ENST00000558581.5	1143	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	107.595952009771	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	35	False	NA	NA	False	AATAAA	-31	NA	23953788	23969279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_28380.known	chr14	+	727	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	89.0126395519198	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCTGCCGTCAAGGT	25	False	NA	NA	False	NA	NA	NA	23953778	23969009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
transcript_28383.known	chr14	+	785	4	FSM	ENSG00000157326.19	ENST00000397074.7	785	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	147.02909764926	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAGAGAAGGAACCTGG	32	False	NA	NA	False	NA	NA	NA	23953785	23969176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23953917_23955034_23955213_23967210_23967267_23968756
transcript_28387.known	chr14	+	1258	8	FSM	ENSG00000187630.18	ENST00000335125.11	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	110.578995680528	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	4	True	NA	NA	False	AATAAA	-26	NA	23988928	24006403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_28389.known	chr14	+	1117	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	142.347286591631	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	-7	True	NA	NA	False	AATAAA	-31	NA	23988817	24006408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
transcript_28394.known	chr14	+	464	2	FSM	ENSG00000225766.11	ENST00000558682.1	464	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACCCAACCAGCCCACC	10	False	NA	NA	False	ACTAAA	-18	NA	24036476	24038054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24036629_24037742
transcript_284.known	chr1	-	549	4	FSM	ENSG00000127054.22	ENST00000531019.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	234.864973028239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	-3	True	NA	NA	False	NA	NA	NA	1324660	1319380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319525_1320455_1320683_1320995_1321094_1324580
transcript_28405.known	chr14	+	2711	15	FSM	ENSG00000100897.18	ENST00000559115.5	2711	15	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_1	82.7484817050427	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114626	24124029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24114925_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_28409.nic	chr14	+	2517	15	NIC	ENSG00000100897.18	novel	2402	15	NA	NA	6	0	intron_retention	FALSE	canonical	3	90	junction_1	94.8371590395551	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	63	False	NA	16	True	AATAAA	-16	NA	24115288	24124029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24115393_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_28416.known	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	34.1481883184467	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	-1	True	NA	13	True	NA	NA	NA	24094310	24104125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_28417.nic	chr14	+	1878	10	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	129.265446100478	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	114	False	NA	13	True	NA	NA	NA	24094279	24104125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103841
transcript_28423.nic	chr14	+	2098	9	NIC	ENSG00000100889.12	novel	2433	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_8	123.168012791471	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGCTGTTTTCATTT	135	False	NA	18	True	NA	NA	NA	24094300	24104130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103509
transcript_28425.nnic	chr14	+	2100	9	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	130.713427007328	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	5	True	NA	13	True	NA	NA	NA	24094170	24104125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24102752_24102891_24103159_24103256_24103509
transcript_28433.known	chr14	+	1830	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	38	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	-7	True	NA	5	True	AATAAA	-1	NA	24094158	24100562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
transcript_28436.known	chr14	+	2570	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	117.126152990208	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	49	True	NA	16	True	AATAAA	-16	NA	24115274	24124029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_28440.known	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	269.472243468599	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	18	True	NA	37	True	AATAAA	-24	NA	24136226	24138967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
transcript_28443.known	chr14	+	1136	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_4	108.683479726369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	-9	True	NA	34	True	AATAAA	-21	NA	24136199	24138964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
transcript_28446.known	chr14	+	865	10	FSM	ENSG00000092010.15	ENST00000561142.5	865	10	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_4	822.264353274947	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAGAAACAAAGGGAATG	-12	True	NA	NA	False	NA	NA	NA	24136196	24138787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138264_24138344_24138400_24138473_24138561_24138735
transcript_2845.known	chr1	+	1036	10	FSM	ENSG00000171960.12	ENST00000678333.1	1036	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	126.155107352462	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCCTGTAATCCCAGC	7	True	NA	NA	False	NA	NA	NA	42658435	42676202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675732
transcript_28454.known	chr14	-	838	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	75.352504935138	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	13	True	NA	-13	True	AATAAA	-15	NA	24141591	24138964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
transcript_28456.known	chr14	-	771	6	FSM	ENSG00000100908.14	ENST00000560600.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	142.700525577168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGTGGACTTTGA	13	True	NA	NA	False	NA	NA	NA	24141487	24139129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139197_24139359_24139455_24139544_24139817_24140888_24140966_24141106_24141317_24141437
transcript_28459.known	chr14	-	953	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	31.1849322590254	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	19	True	NA	-13	True	AATAAA	-15	NA	24141585	24138964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
transcript_2846.known	chr1	+	754	10	FSM	ENSG00000171960.12	ENST00000304979.8	754	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	32.540952356176	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	-6	True	NA	30	True	AATAAA	-18	NA	42658422	42676758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_28462.known	chr14	-	872	5	FSM	ENSG00000100908.14	ENST00000560403.5	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	165.790530489531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	5712	False	NA	-13	True	AATAAA	-15	NA	24141570	24138964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141347
transcript_28469.known	chr14	-	769	3	FSM	ENSG00000100908.14	ENST00000558200.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTGGGTTTCTGGG	5729	False	NA	NA	False	NA	NA	NA	24141553	24139544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24139790_24140888_24140966_24141106
transcript_28470.known	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1345	junction_6	184.464088646002	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	0	True	NA	-8	True	AATAAA	-21	NA	24146610	24143364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_28471.known	chr14	-	1502	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_9	535.674574718644	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGACTAGAAGGAAAATAAA	0	True	NA	-48	True	AAGAAA	-22	NA	24147235	24143404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
transcript_28475.known	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	523.263430103758	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	5	True	NA	-8	True	AATAAA	-21	NA	24146605	24143364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
transcript_28480.known	chr14	-	706	10	FSM	ENSG00000100911.16	ENST00000471700.6	706	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	579.136863075422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTCTGGCGTGTGTC	703	False	NA	-9	True	AATAAA	-20	NA	24146579	24143365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143490_24143584_24143672_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_28482.known	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	16.9737849344217	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	-25	True	NA	11	True	AATAAA	-19	NA	24161264	24166565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
transcript_28496.known	chr14	-	643	1	FSM	ENSG00000100911.16	ENST00000559042.1	643	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCCTTCTGGCGTGTGT	3273	False	NA	-10	True	AATAAA	-19	NA	24144009	24143366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24143400_24144000
transcript_28497.known	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_19	42.9782457484015	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-2	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_285.known	chr1	-	896	4	FSM	ENSG00000127054.22	ENST00000493534.6	896	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	230.213427545446	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAACCCACCAGGCTCT	-1	True	NA	NA	False	NA	NA	NA	1324658	1319059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319706_1320455_1320530_1320995_1321094_1324580
transcript_2850.known	chr1	+	849	10	FSM	ENSG00000171960.12	ENST00000677307.1	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	123.369163964436	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	18	False	NA	30	True	AATAAA	-18	NA	42658446	42676758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659371_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_28502.known	chr14	+	2405	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	27.670999449357	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	5457	False	NA	131	True	AAAACA	-20	NA	24171852	24180257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_28518.known	chr14	-	2200	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	53.4355686785497	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	6	True	NA	-9	True	AATAAA	-16	NA	24195441	24189148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_28525.known	chr14	-	847	6	FSM	ENSG00000254505.11	ENST00000542700.6	847	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	330.00448481801	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCAGCCCTGGCTCAA	2975	False	NA	-159	True	AAAAAG	-10	NA	24213085	24209733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213023
transcript_28528.known	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	19.8957281847134	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-6	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
transcript_28538.known	chr14	-	582	5	FSM	ENSG00000213920.9	ENST00000396833.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	73.3122602297869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-5	True	NA	-9	True	ATTAAA	-31	NA	24216065	24213942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214545_24214600_24215551_24215663_24215736_24215798_24215918
transcript_2854.known	chr1	+	2315	9	FSM	ENSG00000171960.12	ENST00000678803.1	2315	9	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	31.693847983481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTGGATGACATCAAAAA	-3	True	NA	NA	False	NA	NA	NA	42658425	42669179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350
transcript_28542.known	chr14	-	651	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	2163.95591163499	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAATCTTTCTTCTG	10016	False	NA	-26	True	AATAAA	-13	NA	24232325	24216865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
transcript_28551.known	chr14	-	1065	3	FSM	ENSG00000100926.15	ENST00000530468.5	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	158.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTGCTTCGGAATGAC	50	True	NA	46	True	NA	NA	NA	24195584	24192842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24193270_24194674_24195037_24195308
transcript_28554.known	chr14	-	2055	5	FSM	ENSG00000100926.15	ENST00000396854.8	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	57.8338136387356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGATCCCTGCCCTC	16	True	NA	-24	True	AATAAA	-12	NA	24195618	24190041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_2856.nnic	chr1	+	742	9	NIC	ENSG00000171960.12	novel	754	10	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	130.560271043683	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	NA	False	NA	30	True	AATAAA	-18	NA	42658341	42676758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_28562.known	chr14	-	2300	3	FSM	ENSG00000129559.13	ENST00000533242.1	2300	3	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGTTATCTCATTCA	0	True	NA	NA	False	ATTAAA	-18	NA	24232355	24226604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24228713_24231651_24231738_24232249
transcript_28564.known	chr14	+	2276	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	24.8534594059749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	13	True	NA	128	True	AAAACA	-17	NA	24172079	24180254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_28565.known	chr14	+	1007	7	FSM	ENSG00000100918.14	ENST00000559797.1	1007	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	29.2498812913071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	5411	False	NA	128	True	AAAACA	-17	NA	24178125	24180254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799
transcript_28566.known	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	21.2289111041209	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	23	False	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
transcript_28567.known	chr14	-	616	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	4058	junction_3	160.800773906374	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-12	True	NA	-17	True	AATAAA	-22	NA	24232367	24216856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
transcript_28568.known	chr14	-	626	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	1946.36230497362	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	9997	False	NA	-17	True	AATAAA	-22	NA	24232303	24216856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
transcript_28569.known	chr14	-	527	4	FSM	ENSG00000213920.9	ENST00000525696.5	527	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	82.9712132141155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTTACCCACAGTG	422	False	NA	-20	True	ATTAAA	-20	NA	24215638	24213953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24214152_24214261_24214396_24214491_24214600_24215551
transcript_28573.known	chr14	+	1562	10	FSM	ENSG00000100938.19	ENST00000559910.5	1562	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	111.368701412565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACCTCAATAAAGAGA	-3	True	NA	-5	True	AAAAAG	-22	NA	24232635	24239204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28574.known	chr14	+	1893	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	81.0159258844431	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-40	True	NA	33	True	AATAAA	-23	NA	24232441	24239242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28578.known	chr14	+	1972	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	89.2101140255097	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	NA	False	NA	33	True	AATAAA	-23	NA	24232421	24239242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28588.known	chr14	+	1595	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	68.4965530357388	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-4	True	NA	33	True	AATAAA	-23	NA	24232928	24239242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28589.known	chr14	+	1864	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	39.4620070447513	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-5	True	NA	33	True	AATAAA	-23	NA	24232900	24239242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28590.known	chr14	+	1719	9	FSM	ENSG00000100938.19	ENST00000559104.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	99.710831909076	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	14	False	NA	33	True	AATAAA	-23	NA	24232946	24239242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_28591.known	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	61.115541190437	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	4	True	NA	-24	True	ATTAAA	-18	NA	24242623	24239642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_28594.nic	chr14	-	2061	7	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_1	46.6502947471932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-1	True	NA	-24	True	ATTAAA	-18	NA	24242663	24239642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24240156_24240262_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_28595.known	chr14	-	2168	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	23.6220236220354	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-1	True	NA	-24	True	ATTAAA	-18	NA	24242663	24239642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_28597.known	chr14	-	946	5	FSM	ENSG00000092330.18	ENST00000557921.2	946	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	87.505356978873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTAAGAGTCCATGCCAG	255	False	NA	NA	False	NA	NA	NA	24242407	24240500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24240876_24241019_24241117_24241674_24241777_24241889_24241995_24242140
transcript_28599.known	chr14	-	1874	4	FSM	ENSG00000092330.18	ENST00000558566.1	1874	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	93.0244890099137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	14	True	NA	-63	True	AATGAA	-45	NA	24242613	24239681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24240876_24241674_24241777_24241889_24241995_24242140
transcript_28602.nic	chr14	-	1496	9	NIC	ENSG00000157379.14	novel	1427	9	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	21.2705782714058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	8158	False	NA	-5	True	AATAAA	-20	NA	24299818	24290597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292620_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_28603.known	chr14	-	1427	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	9.4794184948234	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-30	True	NA	-5	True	AATAAA	-20	NA	24299780	24290597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_28604.nic	chr14	-	1332	8	NIC	ENSG00000157379.14	novel	1427	9	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	21.946130708196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	8158	False	NA	-5	True	AATAAA	-20	NA	24299818	24290597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_28605.nic	chr14	-	1786	8	NIC	ENSG00000157379.14	novel	1427	9	NA	NA	-38	0	intron_retention	FALSE	canonical	3	49	junction_4	6.04743156814764	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	8158	False	NA	-5	True	AATAAA	-20	NA	24299818	24290597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_28607.known	chr14	-	2027	7	FSM	ENSG00000157379.14	ENST00000561273.5	2027	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	6.51707159867238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTTGGAGCTAATAAAA	-11	True	NA	23	True	NA	NA	NA	24299761	24290635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24290996_24291138_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_28613.nnic	chr14	+	592	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	9	-73	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	4.96655480858378	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACCTTACCTGAAGTTA	-13	True	NA	17	True	CATAAA	-19	NA	24271209	24298785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
transcript_28614.nnic	chr14	+	658	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	4.96655480858378	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAGTATTATAGTTTC	-13	True	NA	83	True	AATAAA	-14	NA	24271209	24298851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
transcript_28616.known	chr14	+	331	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	12	12	12	-12	multi-exon	FALSE	canonical	3	139	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	-10	True	NA	78	True	AATAAA	-9	NA	24271212	24298846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24271311_24298613
transcript_28618.known	chr14	-	609	2	FSM	ENSG00000157379.14	ENST00000558114.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACTCCGGAGGCTGAG	-19	True	NA	NA	False	NA	NA	NA	24299769	24298710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24299131_24299580
transcript_28619.known	chr14	-	1602	5	FSM	ENSG00000136305.12	ENST00000554411.6	1225	5	-286	-91	-286	91	multi-exon	TRUE	canonical	1	2	junction_1	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTCAAGTATGGAGT	3185	False	NA	93	True	NA	NA	NA	24308263	24305095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817
transcript_2862.known	chr1	+	806	9	FSM	ENSG00000171960.12	ENST00000677356.1	806	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_8	32.4381623246447	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	272	False	NA	29	True	AATAAA	-17	NA	42658700	42676757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_28621.known	chr14	-	1872	10	FSM	ENSG00000129465.16	ENST00000216274.10	1872	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.05409255338946	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTGAGCTCAGCCAG	-13	True	NA	NA	False	AATAAA	-16	NA	24339991	24336024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24336396_24336884_24336946_24337085_24337461_24337694_24337763_24337872_24338041_24338248_24338296_24338421_24338568_24339014_24339325_24339456_24339598_24339806
transcript_28622.known	chr14	+	3057	10	FSM	ENSG00000100968.14	ENST00000554050.5	3057	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	31.0976161207746	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	506	False	NA	18	True	AATAAA	-18	NA	24368019	24378056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
transcript_28623.known	chr14	+	4762	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	14.0957922099005	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAAACTCAATATTTT	5	True	NA	3	True	AATAAA	-19	NA	24368183	24379601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_28624.known	chr14	+	7635	9	FSM	ENSG00000205978.6	ENST00000382554.4	7635	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	14.1989216139818	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGTCCAGTTCTTTGT	-14	True	NA	28	True	AATAAA	-15	NA	24399002	24419283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24399087_24399229_24399445_24407868_24408528_24408651_24410209_24411075_24411207_24411353_24411451_24412996_24413099_24413315_24413418_24414595
transcript_28627.nic	chr14	-	1330	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	148.950193017666	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	22	False	NA	-13	True	AATAAA	-19	NA	24442820	24439765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442097_24442261_24442345_24442453_24442753
transcript_28632.known	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	79.288334577036	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	11	True	NA	-13	True	AATAAA	-19	NA	24442776	24439765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
transcript_28634.nic	chr14	-	1307	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	142.381740402342	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	NA	False	NA	-13	True	AATAAA	-19	NA	24442941	24439765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442817
transcript_28638.nic	chr14	-	1335	5	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	38	0	intron_retention	FALSE	canonical	3	177	junction_4	84.7673286119127	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	22	False	NA	-13	True	AATAAA	-19	NA	24442820	24439765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442453_24442753
transcript_28639.known	chr14	-	976	5	FSM	ENSG00000100445.18	ENST00000555365.5	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	149.320125904046	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATCTTTTCAACTC	22	True	NA	NA	False	NA	NA	NA	24442765	24439901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442753
transcript_28644.nic	chr14	-	1128	5	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	131.944116958658	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	22	False	NA	-13	True	AATAAA	-19	NA	24442820	24439765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345_24442453_24442753
transcript_2865.known	chr1	+	2979	8	FSM	ENSG00000065978.19	ENST00000321358.12	2979	8	0	0	0	0	multi-exon	FALSE	canonical	3	2661	junction_1	317.034666230425	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGACTTGTGGTT	5	True	NA	NA	False	ATTAAA	-17	NA	42682417	42703805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_28651.nic	chr14	-	1045	4	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	143.379062472718	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	22	False	NA	-13	True	AATAAA	-19	NA	24442820	24439765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_24440493_24440782_24440927_24442345_24442453_24442753
transcript_28655.known	chr14	-	1041	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	143.327906874024	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTCTCACTAACCTT	394	False	NA	-29	True	AATAAA	-3	NA	24442448	24439781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
transcript_28656.known	chr14	-	1960	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_2	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTCACTAACCTTGG	11	True	NA	-27	True	AATAAA	-5	NA	24442776	24439779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24440493_24440782_24440927_24441673
transcript_28660.nnic	chr14	+	1912	2	NIC	ENSG00000258744.3	novel	1230	2	NA	NA	-46	665	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATCTTTTAATTGA	-6	True	NA	4	True	AATAAA	-15	NA	24442963	24446046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_24443113_24444283
transcript_28661.nnic	chr14	+	1949	2	FSM	ENSG00000258744.3	ENST00000690491.1	1230	2	-46	-673	-46	673	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAATTGATTTTTCCA	-6	True	NA	12	True	AATAAA	-23	NA	24442963	24446054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_24443142_24444283
transcript_28662.known	chr14	-	4132	6	FSM	ENSG00000168952.16	ENST00000323944.10	4190	6	-150	208	-150	-6	multi-exon	FALSE	canonical	3	164	junction_4	12.2212928939618	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAAATTTGTTTCTTGC	NA	False	NA	-12	True	ATTAAA	-14	NA	25050297	24809661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049877
transcript_28665.known	chr14	-	896	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	4.32290411644765	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	15	True	NA	-10	True	AATAAA	-16	NA	26597440	26470117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
transcript_2868.known	chr1	-	2841	5	FSM	ENSG00000164007.11	ENST00000296387.6	2841	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	16.872685026397	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3	True	NA	NA	False	NA	NA	NA	42740236	42733092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42735135_42735877_42736031_42738228_42738314_42738420_42738586_42739840
transcript_2869.known	chr1	-	1586	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	7.03957069398096	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATCATTCGGTCTG	141	False	NA	-10	True	NA	NA	NA	42740140	42734994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
transcript_28692.known	chr14	+	2344	3	FSM	ENSG00000257185.2	ENST00000664061.1	2344	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATGCAATTGAGTTA	NA	False	NA	-39	True	NA	NA	NA	26810672	26820650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_26812397_26816919_26817047_26820157
transcript_28693.nnic	chr14	+	597	3	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-46	-11665	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	28318094	28406947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_28318533_28405425_28405473_28406835
transcript_28694.known	chr14	+	508	3	FSM	ENSG00000257869.1	ENST00000548280.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCCAACCATGGGCCC	NA	False	NA	NA	False	NA	NA	NA	28318140	28418612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_28318533_28405425_28405473_28418543
transcript_28697.known	chr14	+	5770	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	35	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGACTCAGATAAATGGC	-7	True	NA	6	True	AATAAA	-17	NA	30559157	30620064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_287.known	chr1	-	704	4	FSM	ENSG00000127054.22	ENST00000490853.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	227.863019280346	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	8	True	NA	NA	False	NA	NA	NA	1324649	1319380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319844_1320455_1320530_1320995_1321094_1324580
transcript_2870.known	chr1	+	3440	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.93173009029038	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	-5	True	NA	21	True	AATAAA	-22	NA	42817121	42844991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
transcript_28715.known	chr14	+	2334	14	FSM	ENSG00000092140.16	ENST00000438909.6	2334	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	101.32973885455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATTATAGCCACT	-7	True	NA	6	True	AATAAA	-18	NA	30559157	30616669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_28726.nic	chr14	+	1221	11	ISM	ENSG00000092140.16	ENST00000206595.11	5770	15	-31	14499	-31	0	5prime_fragment	FALSE	canonical	3	366	junction_1	32.5146120997929	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGATT	-3	True	NA	NA	False	AATAGA	-17	NA	30559126	30605565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504
transcript_28731.nic	chr14	+	1178	10	ISM	ENSG00000092140.16	ENST00000438909.6	2334	14	-29	11104	-29	0	5prime_fragment	FALSE	canonical	3	76	junction_1	115.369401339489	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGATT	-1	True	NA	NA	False	AATAGA	-17	NA	30559128	30605565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504
transcript_28732.nic	chr14	+	2027	6	ISM	ENSG00000092140.16	ENST00000648008.1	4126	16	-95	23237	-31	1349	5prime_fragment	TRUE	canonical	3	366	junction_1	33.9705755029261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGTGC	-3	True	NA	NA	False	AATACA	-14	NA	30559126	30594988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473
transcript_28736.known	chr14	+	2062	25	FSM	ENSG00000092108.22	ENST00000678399.1	2062	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	143.085056289374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCTCTGTAACAG	NA	False	NA	NA	False	GATAAA	-32	NA	30622303	30735685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707816_30707915_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28738.known	chr14	+	2190	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	57.993878388633	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	-5	True	NA	NA	False	GATAAA	-23	NA	30622318	30735850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_2874.known	chr1	+	4760	5	FSM	ENSG00000164008.17	ENST00000372525.7	4760	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	20.4572725454788	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTAGATGATGCTTGA	-28	True	NA	NA	False	AATAAA	-23	NA	42767248	42779491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42767391_42767508_42767625_42773562_42773650_42774736_42774869_42775208
transcript_28741.known	chr14	+	3589	25	FSM	ENSG00000092108.22	ENST00000676473.1	3589	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	160.264863238605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	6	True	NA	NA	False	TATAAA	-38	NA	30622329	30737192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30643879_30644019_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28742.known	chr14	+	2135	25	FSM	ENSG00000092108.22	ENST00000554437.6	2135	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	160.32644107674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	-12	True	NA	NA	False	AATAAA	-2	NA	30622311	30735799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707816_30707877_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28743.known	chr14	+	2171	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	142.363329928508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	-2	True	NA	NA	False	NA	NA	NA	30622321	30735774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28745.known	chr14	+	1995	24	FSM	ENSG00000092108.22	ENST00000676658.1	1995	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	110.962382290368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTAACAGTGAAAATCAG	NA	False	NA	NA	False	AAAAAG	-44	NA	30622303	30735706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30734789_30734859_30735585
transcript_28746.known	chr14	+	4241	24	FSM	ENSG00000092108.22	ENST00000678516.1	4241	24	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	57.4276235540871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTTCAGAAATAAAATTT	NA	False	NA	NA	False	ATTAAA	-5	NA	30622303	30735782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28747.known	chr14	+	2049	24	FSM	ENSG00000092108.22	ENST00000679102.1	2049	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_16	109.244371494433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	30622303	30735774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28748.known	chr14	+	3446	24	FSM	ENSG00000092108.22	ENST00000676812.1	3446	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	114.845783010245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-9	True	NA	NA	False	TATAAA	-38	NA	30622314	30737192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28749.known	chr14	+	2058	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	99.7876952383559	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAATTTCAACATT	-5	True	NA	NA	False	ATTAAA	-12	NA	30622318	30735789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28750.known	chr14	+	3406	24	FSM	ENSG00000092108.22	ENST00000676465.1	3406	24	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	137.401444314865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-9	True	NA	NA	False	TATAAA	-38	NA	30622314	30737192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638183_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28754.known	chr14	+	1962	22	FSM	ENSG00000092108.22	ENST00000679165.1	1962	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	114.048563471584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGTATTGATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	30622303	30735760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30734789_30734859_30735585
transcript_28755.known	chr14	+	3296	22	FSM	ENSG00000092108.22	ENST00000678716.1	3296	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	118.128624313018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	NA	False	NA	NA	False	TATAAA	-38	NA	30622303	30737192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28758.known	chr14	+	2372	15	FSM	ENSG00000092108.22	ENST00000678006.1	2372	15	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	38.0973511318741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTCAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	30622303	30695867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772
transcript_28764.nnic	chr14	+	1087	12	NNC	ENSG00000092108.22	novel	2358	10	NA	NA	-2819	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	147.833612076226	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	30690367	30735799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_30690578_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_28766.known	chr14	+	4736	11	FSM	ENSG00000092108.22	ENST00000469043.2	4736	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	127.315552859814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTCCTGTCTTAGAA	-9	True	NA	NA	False	NA	NA	NA	30622314	30661939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30658082
transcript_2877.known	chr1	-	536	5	FSM	ENSG00000228192.9	ENST00000425076.1	536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.69966214673719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	25	False	NA	NA	False	AATAAA	-18	NA	42846387	42841897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844611_42846256
transcript_28771.known	chr14	+	425	1	FSM	ENSG00000213867.4	ENST00000468034.1	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTTTTGGTCATTA	24	False	NA	NA	False	NA	NA	NA	30821418	30821843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30821400_30821800
transcript_28774.nic	chr14	+	2156	13	NIC	ENSG00000100473.18	novel	2536	12	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	103.539042555614	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	NA	False	NA	-12	True	ACTAAA	-18	NA	30874477	30890100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30884984_30885042_30885393_30885621_30885795_30886313_30889615
transcript_28776.known	chr14	+	2536	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	55.5540091612144	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_2878.known	chr1	-	610	5	FSM	ENSG00000228192.9	ENST00000444563.6	646	5	33	3	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.69966214673719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	25	False	NA	NA	False	AATAAA	-18	NA	42846387	42841897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844685_42846256
transcript_28783.known	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_8	38.9902551928043	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_28785.known	chr14	+	1997	11	FSM	ENSG00000100473.18	ENST00000475087.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	86.1417436554427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	18	False	NA	NA	False	NA	NA	NA	30874571	30895065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30894912
transcript_28786.known	chr14	+	2582	11	FSM	ENSG00000100473.18	ENST00000216361.9	2582	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	89.8615045500575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	5	True	NA	-12	True	ACTAAA	-18	NA	30874513	30890100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_30874973_30875055_30875299_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_28792.known	chr14	+	4060	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3.81575680566778	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGTAGTGTGA	-1	True	NA	27	True	AATAAA	-24	NA	31025648	31096450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
transcript_28794.known	chr14	+	1608	6	FSM	ENSG00000100478.16	ENST00000554345.6	1608	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	16.1319558640606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTTGTATTTTATAA	1	True	NA	NA	False	AATAAA	-22	NA	31025650	31085802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080645_31084768
transcript_28795.nic	chr14	+	940	4	ISM	ENSG00000100478.16	ENST00000313566.11	1502	5	-337	8498	-213	0	5prime_fragment	FALSE	canonical	3	36	junction_2	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACCTCT	442	False	NA	NA	False	TATAAA	-8	NA	31025424	31073185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904
transcript_28796.known	chr14	-	9080	43	FSM	ENSG00000092148.14	ENST00000553700.5	9080	43	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_19	57.3337288390092	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGTGTCATGTGAC	-20	True	NA	-4	True	ATTAAA	-14	NA	31207804	31100117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_28798.known	chr14	-	819	3	ISM	ENSG00000092148.14	ENST00000556224.6	1838	6	32500	0	31202	0	3prime_fragment	FALSE	canonical	3	128	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTATAAAGTTTGAAATT	NA	False	NA	NA	False	AATAAA	-21	NA	31174974	31172953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_31173427_31173524_31173807_31174910
transcript_28800.known	chr14	-	480	3	FSM	ENSG00000129493.15	ENST00000549184.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	51.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATGAAGCAATCGATAAA	286	False	NA	NA	False	NA	NA	NA	31420295	31400376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_31400513_31402849_31403050_31420151
transcript_28801.known	chr14	-	507	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	50	False	NA	NA	False	ATTAAA	-19	NA	31420531	31400265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_31400513_31402849_31403050_31420471
transcript_28802.known	chr14	-	749	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	20.8486610281492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	135	False	NA	-35	True	NA	NA	NA	31457376	31427506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
transcript_28803.nic	chr14	-	625	4	NIC	ENSG00000203546.7	novel	749	4	NA	NA	-65	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	21.7460085737335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	5	True	NA	-35	True	NA	NA	NA	31457506	31427506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_31427793_31428143_31428189_31453274_31453345_31457282
transcript_28809.known	chr14	+	3040	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	7.0774289116882	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATATCTGAACTGAAA	-12	True	NA	8	True	AATAAA	-24	NA	31561403	31861224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
transcript_28815.known	chr14	-	1848	1	FSM	ENSG00000258655.2	ENST00000553596.2	1848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTCAAGTTATTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	32076793	32074945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_32074900_32076800
transcript_28816.known	chr14	-	1304	1	FSM	ENSG00000286527.1	ENST00000670017.1	1304	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTAACGCCCTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	32201736	32200432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_32200400_32201700
transcript_28817.known	chr14	-	1004	5	FSM	ENSG00000129521.15	ENST00000553215.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	37.9539194286967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGAGAATTATCACAA	243	False	NA	NA	False	NA	NA	NA	33950826	33925398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950677
transcript_28818.known	chr14	-	2706	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	8.73212459828649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCATTCTAATGGTTTGA	-5	True	NA	-10	True	AATAAA	-15	NA	33951074	33924226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
transcript_28823.known	chr14	-	2662	2	FSM	ENSG00000165389.7	ENST00000298130.5	2662	2	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGATTATTTGAGCCT	-1	True	NA	NA	False	ATTAAA	-23	NA	34462240	34432787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34435305_34462095
transcript_28825.known	chr14	-	1303	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_4	44.6031389029965	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTATTGTTTTTGCT	-1	True	NA	-8	True	ATTAAA	-20	NA	34539701	34515937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_28826.nic	chr14	-	1550	6	NIC	ENSG00000129518.10	novel	1303	6	NA	NA	-17	-72	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	159.448298830687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTCTGAGTGTTAT	-21	True	NA	-18	True	ATTAAA	-38	NA	34539721	34516009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539255
transcript_28829.known	chr14	-	841	4	FSM	ENSG00000129518.10	ENST00000555705.1	841	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	187.330367710808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTTAAAGTTAATATT	2	True	NA	NA	False	AAAAAG	-43	NA	34539698	34529355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34529476_34533443_34533540_34536093_34536276_34539255
transcript_2883.nnic	chr1	+	663	4	FSM	ENSG00000164008.17	ENST00000691126.1	639	4	-20	-4	-10	0	multi-exon	FALSE	canonical	3	16	junction_1	75.5836549056004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTATGACTTTTA	-11	True	NA	36	True	NA	NA	NA	42767265	42775527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42767391_42773562_42773650_42774736_42774869_42775208
transcript_28832.nic	chr14	-	497	3	ISM	ENSG00000129518.10	ENST00000250454.8	1303	6	-72	17506	-69	2420	5prime_fragment	FALSE	canonical	3	359	junction_1	61	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAACCTATTTACCAG	NA	False	NA	NA	False	NA	NA	NA	34539773	34533443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_34533540_34536093_34536276_34539554
transcript_28833.known	chr14	+	671	1	FSM	ENSG00000279423.1	ENST00000623080.1	671	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTGTAAATGTTAAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	34541043	34541714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34541000_34541700
transcript_28834.known	chr14	+	164	1	FSM	ENSG00000206596.1	ENST00000383869.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTGGAAGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34546713	34546877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34546700_34546900
transcript_28835.known	chr14	-	164	1	FSM	ENSG00000206588.1	ENST00000383861.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTGGAAGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34556389	34556225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34556200_34556400
transcript_28837.known	chr14	-	1855	15	FSM	ENSG00000129515.20	ENST00000556162.6	1855	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	328.712555095711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATCTTAATCAGAC	18	False	34630176	NA	False	TTTAAA	-35	NA	34630158	34562659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34604134_34604269_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629951_34630110
transcript_28839.known	chr14	-	2975	14	FSM	ENSG00000129515.20	ENST00000652385.1	2975	14	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_13	94.2366403194544	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGAAAATGCTGTGTA	16	False	34630176	NA	False	AATAAA	-20	NA	34630160	34561411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_28854.known	chr14	-	632	4	FSM	ENSG00000165410.15	ENST00000555765.5	632	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	58.9764548122573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTGGATCTTAAGGA	1	True	NA	NA	False	TATAAA	-13	NA	34714555	34712851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714434
transcript_28855.known	chr14	-	4306	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	16.391054470859	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGATCATTGAACCTCT	6	True	NA	NA	False	ATTAAA	-21	NA	34714593	34709112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
transcript_28856.known	chr14	-	1223	4	FSM	ENSG00000165410.15	ENST00000422678.2	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	59.6675977580983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAAATTGTGGCAT	-6	True	NA	NA	False	NA	NA	NA	34714577	34712036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34712978_34713059_34713137_34713396_34713562_34714537
transcript_28857.known	chr14	-	1387	4	FSM	ENSG00000165410.15	ENST00000554470.5	1387	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	63.9079198708753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTTGTTTTCCTTGG	95	False	NA	NA	False	AATAAA	-21	NA	34714823	34712007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34712978_34713059_34713137_34713507_34713562_34714537
transcript_2886.known	chr1	+	768	3	FSM	ENSG00000164008.17	ENST00000650521.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	86	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATATATATATATAT	29	True	NA	45	True	CATAAA	-42	NA	42767305	42775759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42767391_42774736_42774869_42775208
transcript_28864.known	chr14	-	5920	26	FSM	ENSG00000198604.11	ENST00000358716.8	5920	26	0	0	0	0	multi-exon	TRUE	canonical	1	25	junction_14	17.302300425088	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAATTCTCTAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	34875647	34752730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_28867.known	chr14	+	2187	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_12	53.7548344079137	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTAACTTTCTTTA	-15	True	NA	38	True	AATAAA	-23	NA	34982991	35029567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28868.known	chr14	+	2304	15	FSM	ENSG00000100883.13	ENST00000555746.6	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	194.205773995165	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	-4	True	NA	25	True	AATAAA	-10	NA	34982690	35029554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35028087_35028184_35029060
transcript_28869.known	chr14	+	2107	15	FSM	ENSG00000100883.13	ENST00000678519.1	2107	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	201.501316651393	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	-34	True	NA	24	True	AATAAA	-9	NA	34982972	35029553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28870.known	chr14	+	1949	15	FSM	ENSG00000100883.13	ENST00000555557.5	1949	15	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	196.509450881413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTATCTCGAAGGC	18	True	NA	-75	True	NA	NA	NA	34983024	35029454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_28874.known	chr14	+	644	3	FSM	ENSG00000100883.13	ENST00000555317.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_1	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTTCTATTTTACT	-15	True	NA	NA	False	AATAAA	-26	NA	34982991	34999866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_34983216_34996676_34996788_34999557
transcript_28876.known	chr14	-	580	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	0	0	0	multi-exon	TRUE	canonical	3	20	junction_2	18	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCTCTAGAGGTT	-14	True	NA	NA	False	NA	NA	NA	34982532	34963707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_34964041_34969169_34969308_34982423
transcript_28879.known	chr14	+	6118	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	89.3246264413621	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	-15	True	NA	7	True	AATAAA	-21	NA	35122563	35277614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_28880.known	chr14	+	1406	7	FSM	ENSG00000100890.16	ENST00000605870.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	106.129899441937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATCATTTATCGTCC	43	False	NA	-36	True	NA	NA	NA	35122721	35274017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122911_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_28882.nic	chr14	+	2714	7	NIC	ENSG00000100890.16	novel	6118	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	123.034773765613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTTTAATTACTTA	-15	True	NA	25	True	AATAAA	-31	NA	35122563	35274078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_35122768_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_28883.known	chr14	+	789	6	FSM	ENSG00000100890.16	ENST00000557404.3	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	108.913910957233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATATGATGAAGACTT	12	True	NA	NA	False	NA	NA	NA	35122758	35273485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122911_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_28886.nic	chr14	-	2679	14	NIC	ENSG00000092020.11	novel	1511	13	NA	NA	-761	0	intron_retention	FALSE	canonical	3	72	junction_13	48.4892472677368	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	NA	False	NA	-2	True	AATAAA	-26	NA	35123278	35085471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_28888.known	chr14	-	1719	13	FSM	ENSG00000092020.11	ENST00000554222.5	1719	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	65.1342630435182	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTGGTTACTG	79	False	NA	-3	True	AATAAA	-25	NA	35122447	35085472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
transcript_28893.known	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	60.7005766035216	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	-4	True	NA	34	True	NA	NA	NA	35046377	35081387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_28899.known	chr14	+	3053	5	FSM	ENSG00000151327.13	ENST00000280987.9	3053	5	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_4	28.4725745235657	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	6	True	NA	16	True	TATAAA	-17	NA	35046271	35083378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_289.known	chr1	-	773	4	FSM	ENSG00000127054.22	ENST00000532952.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	232.563969694362	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTGCATGAAGAAGGT	15	True	NA	NA	False	NA	NA	NA	1324642	1319346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319886_1320455_1320530_1320995_1321094_1324580
transcript_2890.known	chr1	-	650	3	FSM	ENSG00000177868.12	ENST00000372522.5	650	3	0	0	0	0	multi-exon	TRUE	canonical	2	36	junction_2	316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	582	False	NA	-32	True	AATAAA	-17	NA	42816804	42807051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42807501_42816430_42816581_42816753
transcript_28911.nic	chr14	+	551	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	53	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	-11	True	NA	15	True	AATAAA	-27	NA	35046343	35050396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_35046407_35046504_35046629_35050032
transcript_28913.known	chr14	+	540	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	1	True	NA	15	True	AATAAA	-27	NA	35046452	35050396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35046629_35050032
transcript_28915.known	chr14	-	1511	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_9	24.8741275670569	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-1	True	NA	-2	True	AATAAA	-26	NA	35121990	35085471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
transcript_28916.known	chr14	+	3857	15	FSM	ENSG00000258790.1	ENST00000557565.1	3857	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	1234.2299507906	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCCTGTTGTTTTCAC	-30	True	NA	NA	False	AATAAA	-22	NA	35122548	35317474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35122636_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434_35274292_35278552_35278719_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_2892.known	chr1	-	807	3	FSM	ENSG00000177868.12	ENST00000372521.9	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	57.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-11	True	NA	-32	True	AATAAA	-17	NA	42817397	42807051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42807501_42816430_42816581_42817189
transcript_28920.known	chr14	+	879	7	FSM	ENSG00000100902.11	ENST00000553809.5	879	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	1011.39833069535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTTTGGTAACAACAAA	-19	True	NA	NA	False	ACTAAA	-41	NA	35292397	35317347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312862_35313060_35314360_35314456_35317248
transcript_28921.known	chr14	+	1023	7	FSM	ENSG00000100902.11	ENST00000261479.9	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	2494	junction_5	149.775109191525	2466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTATTTTAAAATTTAT	-35	True	NA	NA	False	AATAAA	-41	NA	35292381	35317493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_28924.known	chr14	+	814	6	FSM	ENSG00000100902.11	ENST00000554961.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1120.08506819795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCCTGTTGTTTTCAC	-24	True	NA	NA	False	AATAAA	-22	NA	35292392	35317474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35314360_35314456_35317248
transcript_28927.known	chr14	+	925	6	FSM	ENSG00000100902.11	ENST00000554541.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1117.03063521105	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTTTGGAAAATAATTG	8	False	NA	NA	False	AATAAA	-5	NA	35292348	35317457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_28928.known	chr14	+	655	4	FSM	ENSG00000100902.11	ENST00000554843.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	2722	junction_2	61.8223260642949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCACAACAGTATGTCG	-29	True	NA	NA	False	AATAAA	-17	NA	35292387	35311052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739
transcript_2893.nnic	chr1	-	775	3	NNC	ENSG00000177868.12	novel	807	3	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	306	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-31	True	NA	-32	True	AATAAA	-17	NA	42817340	42807051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_42807501_42816430_42816606_42817189
transcript_28930.known	chr14	-	1400	6	FSM	ENSG00000100906.11	ENST00000557140.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	123.043732063035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTATTAAACAGATTT	4	True	NA	3	True	NA	NA	NA	35404746	35401539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35402061_35402393_35402535_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_28931.nnic	chr14	-	1273	6	NNC	ENSG00000100906.11	novel	1559	6	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	132.838849739073	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATCCTGATCATTTT	998	False	NA	-7	True	ATTAAA	-15	NA	35404098	35401512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404052
transcript_28932.known	chr14	-	1559	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_5	34.7252069828245	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATCCTGATCATTTT	1	True	NA	-7	True	ATTAAA	-15	NA	35404749	35401512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_28936.known	chr14	-	1537	5	FSM	ENSG00000100906.11	ENST00000557389.1	1537	5	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_4	8.90224690738243	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTATATTTATTAAACA	956	False	NA	-2	True	NA	NA	NA	35404140	35401544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689
transcript_2894.known	chr1	-	708	3	FSM	ENSG00000177868.12	ENST00000497437.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGGTAGATGGTGTT	-5	True	NA	NA	False	NA	NA	NA	42817252	42813409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42813905_42816430_42816581_42817189
transcript_28941.known	chr14	+	1544	11	FSM	ENSG00000100916.14	ENST00000552677.5	1544	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	52.1544820700963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGGCCGATAGAATGT	1	True	NA	NA	False	TTTAAA	-36	NA	35826440	35870860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35826659_35829794_35829908_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_28943.known	chr14	+	2637	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_6	10.7404853098618	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	1	True	NA	23	True	AATAAA	-20	NA	35826337	35871963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_28951.known	chr14	-	1586	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	114.655939117867	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCCCTTTGACGGTGTG	-9	True	NA	-34	True	AATAAA	-14	NA	36320627	36298567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28955.known	chr14	-	1449	8	FSM	ENSG00000151332.20	ENST00000359527.11	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	142.431652065839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATAAACAATAGATCCA	11	True	NA	-56	True	NA	NA	NA	36320607	36298589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_36299191_36300784_36300824_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28956.known	chr14	-	952	7	FSM	ENSG00000151332.20	ENST00000605579.5	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	28.6065260619554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATCTATAAGCAAAACA	92	False	NA	NA	False	AATGAA	-44	NA	36320577	36308016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28957.known	chr14	-	1809	10	NNC	ENSG00000151332.20	novel	1603	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	175.246140832097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGACGGTGTGACT	-6	True	NA	-31	True	AATAAA	-17	NA	36320624	36298564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_36299191_36300784_36300827_36305088_36305306_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_28960.known	chr14	+	1924	1	FSM	ENSG00000258708.1	ENST00000556667.1	1924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGAAAATGTTTACC	78	False	NA	22	True	AATAAA	-36	NA	37171887	37173811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_37171900_37173800
transcript_28965.known	chr14	+	5983	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_12	9.21464715668605	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	-18	True	NA	9	True	AATAAA	-21	NA	37197936	37551259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_2897.known	chr1	+	1859	4	FSM	ENSG00000164011.18	ENST00000372506.5	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	14.0554457615387	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	14	True	NA	NA	False	AGTAAA	-16	NA	42846627	42852477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
transcript_28979.nnic	chr14	+	1193	5	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.3098334236006	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	0	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38193240_38193324_38196740_38196991_38199045_38199512_38202781
transcript_28983.nnic	chr14	+	1249	5	NNC	ENSG00000258649.2	novel	1017	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.5285481429581	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	1	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38193183_38193324_38196740_38196991_38199045_38199512_38202781
transcript_28985.nnic	chr14	+	943	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	3.74165738677394	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	0	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_38191232_38193240_38193324_38199045_38199512_38202781
transcript_2899.known	chr1	+	1683	3	FSM	ENSG00000164011.18	ENST00000372507.5	1683	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	12	True	NA	NA	False	AGTAAA	-16	NA	42846625	42852477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42846658_42849290_42849414_42850949
transcript_28991.nnic	chr14	+	999	4	NIC	ENSG00000258649.2	novel	1017	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	16.779617264871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	1	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_38191232_38193183_38193324_38199045_38199512_38202781
transcript_28992.nnic	chr14	+	1109	4	NNC	ENSG00000258649.2	novel	859	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.2155056000751	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	1	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38196740_38196991_38199045_38199512_38202781
transcript_28995.nnic	chr14	+	756	3	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-1	-6432	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	0	True	NA	12	True	NA	NA	NA	38190981	38196491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38193240_38193324_38196068
transcript_28999.nnic	chr14	+	859	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	8	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	1	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_38191232_38199045_38199512_38202781
transcript_29.known	ERCC-00078	+	977	1	FSM	ERCC-00078A	DQ883673	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00078_+_0_1000
transcript_29000.nnic	chr14	+	1049	2	NNC	ENSG00000258649.2	novel	531	3	NA	NA	0	-5383	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCTAAAAATTTCATAT	1	True	NA	NA	False	AGTAAA	-30	NA	38190982	38197540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_38191232_38196740
transcript_29001.known	chr14	+	531	3	FSM	ENSG00000258649.2	ENST00000555655.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGACTCCTGCCTCAA	1	True	NA	16	True	AATAAA	-24	NA	38190982	38202923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_38191232_38193183_38193324_38202781
transcript_29004.known	chr14	-	3843	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_14	56.2769172284906	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-40	True	NA	-1	True	AATAAA	-18	NA	39103235	39031918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_29005.nic	chr14	-	1722	11	ISM	ENSG00000100934.15	ENST00000307712.11	3843	20	-9	32814	-1	-184	5prime_fragment	FALSE	canonical	3	504	junction_5	59.1239376225907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGCGAACGCACAGGA	-49	True	NA	NA	False	AAAAAG	-8	NA	39103244	39064732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_29008.known	chr14	+	1476	11	FSM	ENSG00000092208.19	ENST00000525153.6	1476	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.125732651308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	NA	False	NA	6	True	AATAAA	-22	NA	39114284	39136973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39121906_39122025_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_2901.nnic	chr1	+	1750	3	NIC	ENSG00000164011.18	novel	1874	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	9	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	0	True	NA	NA	False	AGTAAA	-16	NA	42846613	42852477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_42846658_42849564_42849743_42850949
transcript_29010.known	chr14	+	1320	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_5	32.8366702572025	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	9	True	NA	6	True	AATAAA	-22	NA	39114322	39136973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_29012.known	chr14	+	825	10	FSM	ENSG00000092208.19	ENST00000412033.7	825	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	112.063584243858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCAATTCAAGTACAG	-8	True	NA	NA	False	NA	NA	NA	39114305	39136541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114396_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_29014.known	chr14	+	801	9	FSM	ENSG00000092208.19	ENST00000396249.7	801	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	108.757471007743	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGAAGATATTTCTCAT	-8	True	NA	NA	False	NA	NA	NA	39114305	39136496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39136439
transcript_29017.known	chr14	+	1094	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	115.565998459755	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	-8	True	NA	25	True	NA	NA	NA	39114305	39136775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_2902.known	chr1	+	1577	2	FSM	ENSG00000164011.18	ENST00000372508.7	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	-5	True	NA	NA	False	AGTAAA	-16	NA	42846608	42852477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42846658_42850949
transcript_29023.nic	chr14	+	1115	8	NIC	ENSG00000092208.19	novel	1320	10	NA	NA	5	64	combination_of_known_junctions	FALSE	canonical	3	49	junction_5	154.818656261223	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGTTACTAAAATTT	-24	True	NA	11	True	TATAAA	-16	NA	39114289	39136839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39136439
transcript_29026.known	chr14	-	1000	6	FSM	ENSG00000182400.15	ENST00000555269.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	43.3192797724062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCCTTATTTTAAACC	13	True	NA	50	True	AATGAA	-33	NA	39170353	39150117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159449_39159551_39170014
transcript_29027.known	chr14	-	3251	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	10.2878569196893	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTCGTGATTTTGT	33	True	NA	-5	True	AATAAA	-19	NA	39170333	39147813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
transcript_29030.known	chr14	-	4533	5	FSM	ENSG00000182400.15	ENST00000469361.5	4533	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	9.9247166206396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCGTGATTTTGTGGT	8639	False	NA	-2	True	AATAAA	-22	NA	39170532	39147810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39159551_39170014
transcript_29032.known	chr14	-	3229	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.7523584206019	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCGTGATTTTGTGG	-27	True	NA	-3	True	AATAAA	-21	NA	39170393	39147811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
transcript_2904.known	chr1	-	3384	10	FSM	ENSG00000117394.24	ENST00000426263.10	3384	10	0	0	0	0	multi-exon	TRUE	canonical	3	478	junction_7	55.6372732333236	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAGAAGTTTGCTTTT	-1	True	NA	4	True	AATAAA	-41	NA	42958868	42925352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_29042.known	chr14	+	3537	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_6	29.7297725352886	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	10	True	NA	4	True	ATTAAA	-15	NA	39175253	39183220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
transcript_29066.nnic	chr14	+	2680	24	NNC	ENSG00000150527.18	novel	3441	23	NA	NA	-215	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	34.1335639662183	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGAGTAAATTATTTC	197	False	NA	4	True	AATAAA	-18	NA	39266870	39350423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_39267040_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_29069.nic	chr14	+	2829	24	NIC	ENSG00000150527.18	novel	3860	24	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	32.1521077695766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	5	True	NA	19	True	AATAAA	-20	NA	39267365	39350694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_39267523_39276933_39276956_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_29071.known	chr14	+	3860	24	FSM	ENSG00000150527.18	ENST00000280083.7	3860	24	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_18	23.9107508782438	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACTAAAAAGAAA	-6	True	NA	NA	False	AAAACA	-4	NA	39267145	39351395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_29076.known	chr14	+	2762	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_18	25.6723232649128	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	19	False	NA	19	True	AATAAA	-20	NA	39267413	39350694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_2908.known	chr1	-	541	2	FSM	ENSG00000117394.24	ENST00000460369.3	541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTTTTGACAGTTTGG	2216	False	NA	NA	False	AATAAA	-13	NA	42958859	42951615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_42951931_42958633
transcript_29080.nnic	chr14	+	2813	23	NIC	ENSG00000150527.18	novel	3860	24	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	34.832687460236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	-1	True	NA	19	True	AATAAA	-20	NA	39267359	39350694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_39267523_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_29087.nic	chr14	+	721	3	FSM	ENSG00000258526.8	ENST00000685977.1	732	3	11	0	-4	0	multi-exon	FALSE	canonical	2	3	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAGGAACTTGTTATG	-4	True	NA	NA	False	AATAAA	-24	NA	39432622	39470743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_39432676_39433487_39433730_39470317
transcript_29091.nnic	chr14	+	2909	3	NIC	ENSG00000286099.1	novel	4839	11	NA	NA	-6	-157029	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTGATGTCACATTGT	-19	True	NA	NA	False	AATAAA	-25	NA	40629999	40744826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_40630230_40699224_40699303_40742225
transcript_29093.nnic	chr14	+	690	5	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-237	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	60.9282364753814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	NA	False	NA	-1	True	AATAAA	-11	NA	40954455	41149309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954677_40954822_40954953_40962789_40962843_40974339_40974391_41149074
transcript_29094.nnic	chr14	+	530	5	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-163	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	57.3470792630279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	NA	False	NA	-1	True	AATAAA	-11	NA	40954529	41149309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954591_40954822_40954953_40962789_40962843_40974339_40974391_41149074
transcript_29097.nnic	chr14	+	784	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-199	-8255	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	42.4578222082418	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	NA	False	NA	0	True	AATAAA	-22	NA	40954493	41141054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_29098.nnic	chr14	+	1656	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-213	-7397	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	42.4578222082418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGATGAATAGATCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	40954479	41141912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_29099.known	chr14	+	599	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	26.9196334794266	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	NA	False	NA	-1	True	AATAAA	-11	NA	40954692	41149309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
transcript_2910.known	chr1	+	1124	4	FSM	ENSG00000227533.7	ENST00000431759.5	1124	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTAAGCTTTATTTT	8	True	NA	NA	False	AATAAA	-17	NA	42959048	42983358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42959578_42970248_42970395_42973973_42974189_42983124
transcript_29102.known	chr14	-	530	2	FSM	ENSG00000258636.2	ENST00000557067.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATATCCCATTAAAAAGT	NA	False	NA	NA	False	AATAAA	-7	NA	41604856	41587860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_41588288_41604753
transcript_29106.known	chr14	+	2935	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	3.93700393700591	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGCTCCCAGATTTTC	-16	True	NA	17	True	AATAAA	-30	NA	44897274	44907257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
transcript_29108.known	chr14	-	6522	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2.27760839478607	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATATGTCATATGAT	-17	True	NA	-20	True	AATAAA	-14	NA	44961947	44924323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
transcript_2911.known	chr1	+	3075	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	0	4	0	multi-exon	FALSE	canonical	3	6	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	42959103	42976428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_42959578_42970248_42970395_42973973
transcript_29112.nic	chr14	-	2267	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-21	8990	-1	-4501	5prime_fragment	FALSE	canonical	3	27	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAAGA	-38	True	NA	NA	False	NA	NA	NA	44961968	44933313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_29113.nic	chr14	-	2046	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-21	9211	-1	-4722	5prime_fragment	FALSE	canonical	3	27	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTAATCGTAATTCTGA	-38	True	NA	-12	True	AATAAA	-25	NA	44961968	44933534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_29115.nic	chr14	-	1351	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-21	9906	-1	-5417	5prime_fragment	FALSE	canonical	3	27	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAATGGCAACCTGTG	-38	True	NA	NA	False	NA	NA	NA	44961968	44934229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_29116.nnic	chr14	-	1145	3	NNC	ENSG00000179454.14	novel	847	3	NA	NA	-1	7543	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	12	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTAGTATTC	-38	True	NA	NA	False	AATAAA	-18	NA	44961968	44937689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_44937813_44945029_44945929_44961845
transcript_29117.nic	chr14	+	3754	10	ISM	ENSG00000198718.13	ENST00000361577.7	6247	19	11	46209	0	-74	5prime_fragment	FALSE	canonical	3	19	junction_7	2.64341716741563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAGAAGAGAAAGAAC	-1	True	NA	NA	False	NA	NA	NA	44962218	45028222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007_45006268_45008912_45009146_45011974_45012076_45025782_45025873_45027298_45027475_45028175
transcript_29118.known	chr14	+	4992	5	FSM	ENSG00000198718.13	ENST00000555607.1	4992	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2.59807621135332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGTATGTTTCTATTT	-6	True	NA	NA	False	ATTAAA	-35	NA	44962213	45008147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007
transcript_29125.known	chr14	+	3532	14	FSM	ENSG00000185246.18	ENST00000355765.11	3532	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	54.0439225272387	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	0	True	NA	NA	False	NA	NA	NA	45084115	45116282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_29135.known	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2862	junction_2	110.878937985935	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-9	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
transcript_29144.known	chr14	-	1684	8	FSM	ENSG00000100442.11	ENST00000216330.7	1684	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1061.11545083464	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATGAGTCTTCCGTTT	639	False	NA	-5	True	AATAAA	-14	NA	45135319	45115599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348_45134807_45135258
transcript_29145.known	chr14	+	645	2	FSM	ENSG00000185246.18	ENST00000556782.5	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTGTAGAGAGTCAGT	2	True	NA	NA	False	NA	NA	NA	45084117	45095733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_45084250_45095220
transcript_29149.known	chr14	+	2354	11	FSM	ENSG00000187790.11	ENST00000556036.5	2354	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	7.23118247591637	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGAAAACAGTTTT	1	True	NA	NA	False	ATTAAA	-42	NA	45135939	45167423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949
transcript_29150.known	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_14	35.957440120231	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	277	False	45253219	-2	True	AATAAA	-21	NA	45253202	45203189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_29151.nic	chr14	-	2706	12	NIC	ENSG00000129534.14	novel	4577	17	NA	NA	-5	2573	combination_of_known_junctions	TRUE	canonical	3	52	junction_11	109.727611658737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAATTAAAAGGAA	272	False	45253219	-2	True	AAGAAA	-9	NA	45253207	45224252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
transcript_29159.known	chr14	-	443	4	FSM	ENSG00000259129.6	ENST00000557749.5	443	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGCTCTACCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	47795092	47767064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_47767269_47768830_47768911_47789905_47789944_47794971
transcript_29160.known	chr14	-	3173	3	FSM	ENSG00000259129.6	ENST00000555985.6	3173	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCCTCTCTCCTTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	47795302	47764953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_47767758_47789905_47789944_47794971
transcript_29164.nnic	chr14	-	1223	4	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2472	-1	multi-exon	FALSE	canonical	3	13	junction_2	286.142544120156	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAACTGTATGTCTGAT	NA	False	NA	-7	True	AATAAA	-18	NA	48268081	48233743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr14_-_48234227_48235430_48235619_48265560_48265755_48267723
transcript_29171.nnic	chr14	-	972	3	NNC	ENSG00000289195.1	novel	923	3	NA	NA	-7381	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	337	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAACTGTATGTCTGAT	NA	False	NA	-7	True	AATAAA	-18	NA	48268024	48233743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48234227_48235430_48235619_48267723
transcript_29172.nnic	chr14	-	2315	3	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2360	-1	intron_retention	FALSE	canonical	3	13	junction_1	73.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAACTGTATGTCTGAT	NA	False	NA	-7	True	AATAAA	-18	NA	48267969	48233743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr14_-_48235619_48265560_48265755_48267723
transcript_29173.nnic	chr14	-	1471	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2415	513	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCTTTCTTTAGCACT	NA	False	NA	-3	True	AATAAA	-18	NA	48268024	48261507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_29175.nnic	chr14	-	1210	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2415	252	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGCCCTAAATCTTGC	NA	False	NA	-14	True	ATTAAA	-19	NA	48268024	48261768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_29176.nnic	chr14	-	1865	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2367	252	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	51.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGCCCTAAATCTTGC	NA	False	NA	-14	True	ATTAAA	-19	NA	48267976	48261768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48266458_48267723
transcript_29177.nnic	chr14	-	715	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2371	-199	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGGTTGGAATTACAG	NA	False	NA	-5	True	AATAAA	-27	NA	48267980	48262219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_29178.nnic	chr14	-	600	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2472	-415	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGGTAGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	48268081	48262435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_29180.nnic	chr14	-	815	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2358	-415	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	77	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGGTAGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	48267967	48262435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_48262813_48265560_48265755_48267723
transcript_29188.known	chr14	+	1502	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	151.633329669524	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTAACTTTTTTT	1	True	NA	14	True	ATTAAA	-17	NA	49598939	49614672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
transcript_29191.known	chr14	+	957	3	FSM	ENSG00000165501.17	ENST00000318317.8	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	149	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	6	True	NA	12	True	ATTAAA	-15	NA	49598760	49614670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49599204_49602369_49602469_49614255
transcript_29193.known	chr14	-	403	1	FSM	ENSG00000244270.1	ENST00000497398.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGAATGTGTTTGTTTT	9064	False	NA	-97	True	NA	NA	NA	49577794	49577391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49577400_49577800
transcript_29194.known	chr14	+	299	1	FSM	ENSG00000276168.1	ENST00000618786.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	12	False	NA	-12	True	NA	NA	NA	49586579	49586878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49586600_49586900
transcript_29195.known	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	2642.5	18068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-4	True	NA	-31	True	AATAAA	-15	NA	49586380	49583576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49583676_49585949_49586050_49586284
transcript_29196.known	chr14	-	7062	3	FSM	ENSG00000213741.11	ENST00000396020.7	7062	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	10575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTCTATGTGATGGT	0	True	NA	1	True	AATAAA	-29	NA	49586376	49570983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49577854_49585949_49586050_49586284
transcript_29197.known	chr14	-	499	2	FSM	ENSG00000213741.11	ENST00000557367.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	507	False	NA	30	True	AATAAA	-13	NA	49586351	49583578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49583676_49585949
transcript_29199.known	chr14	-	676	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	6112	junction_1	0	3397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTTAGAAGGATCTTTA	-6	True	NA	NA	False	CATAAA	-7	NA	49620626	49618529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49619141_49620561
transcript_29201.known	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	22	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-12	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49626049_49628011_49628156_49633286
transcript_29202.known	chr14	-	2819	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	2	True	NA	-15	True	AATAAA	-20	NA	49635230	49625173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49626049_49633286
transcript_29204.nic	chr14	-	1812	20	NIC	ENSG00000100479.13	novel	1692	19	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	30.0518480863857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTAGGATGTTCTGC	NA	False	NA	-25	True	AATAAA	-8	NA	49688244	49643563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_49643671_49646993_49647093_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_29206.known	chr14	-	1692	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_14	15.1703292280981	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	-3	True	NA	-16	True	AATAAA	-17	NA	49688214	49643554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_29209.known	chr14	-	1792	18	FSM	ENSG00000100479.13	ENST00000539565.6	1792	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	23.9978372727966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTACAATAAAATTATG	NA	False	NA	-46	True	AAGAAA	-43	NA	49688422	49643584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
transcript_29213.nic	chr14	-	1667	18	NIC	ENSG00000100479.13	novel	1692	19	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	24.4346455491826	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	NA	False	NA	-16	True	AATAAA	-17	NA	49688244	49643554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_29219.known	chr14	-	1581	17	FSM	ENSG00000100479.13	ENST00000554396.5	1581	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_12	15.3132652869987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATTATTGTCGAAGT	1	True	NA	NA	False	AATATA	-6	NA	49688210	49650187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_29231.known	chr14	-	496	3	FSM	ENSG00000100479.13	ENST00000553805.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGTTGATCTGACTTTT	30	False	NA	55	True	NA	NA	NA	49688203	49679473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49679801_49683592_49683694_49688135
transcript_29235.known	chr14	-	5819	33	FSM	ENSG00000165525.18	ENST00000298310.10	5819	33	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_19	22.9414804107647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTAGTATATGCCTTC	17	True	NA	NA	False	AATAAA	-13	NA	49852788	49782082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_29243.nic	chr14	-	2949	26	ISM	ENSG00000165525.18	ENST00000298310.10	5819	33	-295	13708	-262	4860	5prime_fragment	FALSE	canonical	3	147	junction_12	23.511699215497	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTTCAGGATGATCTA	9761	False	NA	NA	False	AATGAA	-14	NA	49853083	49795790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_29245.nic	chr14	-	2594	26	ISM	ENSG00000165525.18	ENST00000298310.10	5819	33	-34	13802	-1	4766	5prime_fragment	FALSE	canonical	3	147	junction_12	23.511699215497	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGATAAAGAAAAAGAAAGTA	-17	True	NA	NA	False	AAGAAA	-45	NA	49852822	49795884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_29248.nic	chr14	-	2534	25	ISM	ENSG00000165525.18	ENST00000298310.10	5819	33	-33	17391	0	1177	5prime_fragment	FALSE	canonical	3	147	junction_11	23.9860709000499	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACATCTGTGTTAATT	-16	True	NA	-5	True	AGTAAA	-40	NA	49852821	49799473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_29260.nic	chr14	-	1627	14	NIC	ENSG00000165525.18	novel	5819	33	NA	NA	-262	-110	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	52.1824291994898	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAGAAAAAACAAAA	9761	False	NA	NA	False	AATGAA	-16	NA	49853083	49828722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_49828788_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_29264.nic	chr14	-	1647	14	ISM	ENSG00000165525.18	ENST00000298310.10	5819	33	-295	46640	-262	-110	5prime_fragment	FALSE	canonical	3	154	junction_3	26.9753339006815	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAGAAAAAACAAAA	9761	False	NA	NA	False	AATGAA	-16	NA	49853083	49828722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_29266.known	chr14	+	4969	13	FSM	ENSG00000165516.11	ENST00000298307.10	4969	13	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_5	65.3696221497417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGTGCTGAAGTATAA	16	True	NA	19	True	AATAAA	-19	NA	49768152	49786385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_29275.known	chr14	+	1756	12	FSM	ENSG00000165516.11	ENST00000555443.5	1756	12	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_5	67.6521242634359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGTATTTAACA	31	False	NA	0	True	NA	NA	NA	49768167	49783115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_29283.known	chr14	+	1308	1	FSM	ENSG00000278002.1	ENST00000618845.1	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGTTCCAATCTGATG	397	False	NA	NA	False	AATAAA	-18	NA	49863071	49864379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_49863100_49864400
transcript_29284.known	chr14	-	1486	2	FSM	ENSG00000282885.2	ENST00000655317.1	1486	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTTCTGGGTCTGCC	5296	False	NA	NA	False	AATAAA	-17	NA	49862864	49861175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_49862317_49862519
transcript_29288.known	chr14	-	1772	6	FSM	ENSG00000100483.14	ENST00000395860.7	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.4277510374971	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-4	True	NA	-13	True	AATAAA	-15	NA	50116572	50108636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_29289.known	chr14	-	1793	6	FSM	ENSG00000100483.14	ENST00000491402.5	1793	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	14.7105404387466	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTGAATTTCAGAAA	NA	False	NA	-9	True	AATAAA	-19	NA	50116600	50108632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_29290.known	chr14	-	795	5	FSM	ENSG00000100483.14	ENST00000395859.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.9903828367341	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAAAATTCCTGCTTG	NA	False	NA	NA	False	GGGGCT	-8	NA	50116600	50109536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_29291.nic	chr14	-	1714	5	NIC	ENSG00000100483.14	novel	1793	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.099568961958	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	NA	False	NA	-13	True	AATAAA	-15	NA	50116630	50108636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_50109714_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_29292.known	chr14	-	1849	5	FSM	ENSG00000100483.14	ENST00000484763.1	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	16.2076370887307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTGTGACTGTGAA	10	True	NA	-18	True	AATAAA	-10	NA	50116558	50108641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079
transcript_29295.known	chr14	-	1958	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	12.8514590611339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAATTTTGAAGAGT	-4	True	NA	NA	False	AATACA	-18	NA	50312229	50245650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_29299.nnic	chr14	-	2131	11	NNC	ENSG00000087299.12	novel	1958	11	NA	NA	-20	-798	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	33.3256657847972	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCCAGCCTGG	5	True	NA	NA	False	NA	NA	NA	50312188	50246448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50279136_50279229_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_293.known	chr1	-	1589	3	FSM	ENSG00000127054.22	ENST00000498173.2	1589	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	15.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	NA	False	NA	-16	True	AATGAA	-15	NA	1324687	1318680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1319525_1320455_1321094_1324580
transcript_29303.known	chr14	-	6095	10	FSM	ENSG00000087299.12	ENST00000267436.9	6095	10	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	6.51683479938453	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTGTCCCTGGGAT	-4	True	NA	-5	True	ATTAAA	-16	NA	50312229	50242433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_29309.known	chr14	+	2944	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	92.2119298138804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-6	True	NA	15	True	AATAAA	-25	NA	50312323	50327957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_29315.known	chr14	+	2908	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	60.8173494983134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-6	True	NA	15	True	AATAAA	-25	NA	50312323	50327957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_29322.nnic	chr14	+	1261	5	NNC	ENSG00000125375.18	novel	2908	5	NA	NA	-23	17	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	106.55515003978	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGTAAACTAGGTAAC	797	False	NA	NA	False	AAAAAG	-1	NA	50312300	50326243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324161_50325608
transcript_29324.known	chr14	+	1843	5	FSM	ENSG00000125375.18	ENST00000554204.7	1843	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	113.748626365332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-1	True	NA	NA	False	NA	NA	NA	50312328	50326226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50313061_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_29326.known	chr14	+	620	5	FSM	ENSG00000125375.18	ENST00000554951.6	666	5	0	46	0	-46	multi-exon	FALSE	canonical	1	1	junction_1	113.38292419937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAGCACTGCCTTCTC	754	False	NA	-48	True	AAAAAG	-20	NA	50321318	50325677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50321377_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_29329.nic	chr14	+	583	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-23	1814	-23	0	5prime_fragment	FALSE	canonical	3	220	junction_1	44	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	797	False	NA	11	True	ATTAAA	-13	NA	50312300	50322892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_50312390_50321482_50321595_50322510
transcript_29330.known	chr14	+	3844	14	FSM	ENSG00000198513.14	ENST00000556478.3	3844	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	10.2610886765685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATACATTCGATTTA	NA	False	NA	NA	False	ATTAAA	-5	NA	50532508	50634017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50532874_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_29332.known	chr14	+	2853	14	FSM	ENSG00000198513.14	ENST00000441560.6	2853	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.4745394328992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTGAATTTGAAAAT	235	False	NA	NA	False	ATTAAA	-32	NA	50533025	50633049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50533368_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_29337.known	chr14	-	1317	3	FSM	ENSG00000100503.26	ENST00000463419.1	1317	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTGGTTGTTGGGGTAG	-8	True	NA	NA	False	NA	NA	NA	50830674	50805916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50806819_50821873_50822078_50830463
transcript_29339.nnic	chr14	-	2818	20	NNC	ENSG00000100504.17	novel	2799	20	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	53.4167745240577	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	-4	True	NA	-17	True	AATAAA	-21	NA	50944487	50905216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923953_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_29340.known	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_13	35.9477922453246	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	0	True	NA	-17	True	AATAAA	-21	NA	50944483	50905216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_29341.known	chr14	-	2696	19	FSM	ENSG00000100504.17	ENST00000544180.6	2696	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	51.9091085991231	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGTGCCAAAACTTAT	0	True	NA	-18	True	AATAAA	-20	NA	50944483	50905217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50944160
transcript_29342.nnic	chr14	-	2701	19	NIC	ENSG00000100504.17	novel	2799	20	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	54.3737636442384	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	-4	True	NA	-17	True	AATAAA	-21	NA	50944487	50905216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_29345.known	chr14	+	850	6	FSM	ENSG00000131969.15	ENST00000554566.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	87.3558240760168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATGCTGAAACCTCA	NA	False	NA	NA	False	NA	NA	NA	50893581	50904571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_50893759_50895563_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_29346.nnic	chr14	+	952	5	NNC	ENSG00000131969.15	novel	588	4	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	104.841249038725	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893504	50904970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_50893544_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_29348.nic	chr14	+	1163	5	NIC	ENSG00000131969.15	novel	850	6	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	97.9298218113359	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893508	50904970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_50893759_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_29349.known	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	19.6516538744198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	13	False	NA	15	True	AATAAA	-43	NA	50944470	50923236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_2935.nnic	chr1	-	1199	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	462.507444050871	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172263_43193246
transcript_29352.nnic	chr14	+	1084	4	NIC	ENSG00000131969.15	novel	850	6	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	122.411873062488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893508	50904970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_50893759_50901828_50901912_50904073_50904193_50904338
transcript_29354.known	chr14	+	4025	8	FSM	ENSG00000139921.13	ENST00000457354.7	4025	8	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_7	126.628655234629	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAAGTCAGATTATATA	0	True	NA	36	True	AATAAA	-30	NA	51240246	51257655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51240445_51243855_51243972_51245312_51245359_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_29358.known	chr14	+	4800	14	FSM	ENSG00000139926.16	ENST00000344768.10	4800	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	17.780049986285	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	-19	True	NA	25	True	AATAAA	-21	NA	51651909	51730727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701160_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_2936.nnic	chr1	-	1181	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	462.507444050871	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172263_43193264
transcript_29360.known	chr14	+	4828	14	FSM	ENSG00000139926.16	ENST00000395718.6	4828	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	14.6840492295262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	NA	False	NA	25	True	AATAAA	-21	NA	51651857	51730727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701136_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_29363.known	chr14	+	2125	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	34	1414	4	1220	multi-exon	FALSE	canonical	3	120	junction_2	29.4089933334837	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAGAAAAAGTT	3	True	NA	NA	False	AAAAAG	-5	NA	51860645	51968381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
transcript_29366.known	chr14	+	3729	3	FSM	ENSG00000186469.9	ENST00000335281.8	3729	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	83.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCAGTCAATTT	14	False	NA	23	True	AATAAA	-17	NA	51860413	51969794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51860791_51950649_51950766_51966558
transcript_2937.nnic	chr1	-	1217	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	non_canonical	0	0	junction_9	462.507444050871	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172282_43193247
transcript_29372.known	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	113.525866871738	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	-10	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
transcript_29373.known	chr14	+	851	8	FSM	ENSG00000087302.9	ENST00000556760.5	851	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	842.518503400031	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTATTGCTTTTTTCTT	-3	True	NA	2	True	NA	NA	NA	51989614	52004653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004239_52004243_52004361
transcript_29379.known	chr14	-	3827	18	NNC	ENSG00000087303.19	novel	4870	22	NA	NA	-169	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	11.9601414163446	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGGATCTATATTGTC	101	False	NA	0	True	AATAAA	-21	NA	52069228	52004802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52027200_52027345_52028721_52028851_52029546_52029691_52038746_52038978_52040650_52040852_52042104_52042340_52068019_52068164_52068766
transcript_2938.nnic	chr1	-	1200	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	canonical	0	0	junction_9	462.507444050871	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172282_43193264
transcript_29380.known	chr14	-	4557	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_16	14.4681546853771	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAAGCCTCCTTTAG	17	True	NA	-14	True	AATAAA	-20	NA	52552505	52430595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
transcript_29382.known	chr14	-	5139	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_4	34.8950171546343	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	-3	True	NA	0	True	AATAAA	-18	NA	52695558	52639914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
transcript_29386.known	chr14	+	2163	14	FSM	ENSG00000100519.12	ENST00000445930.7	2163	14	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_4	76.752888656778	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGAATCATCATTGG	-7	True	NA	NA	False	AATAAA	-16	NA	52707199	52728590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_2939.nnic	chr1	-	1226	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	TRUE	non_canonical	0	0	junction_9	462.507444050871	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172293_43193249
transcript_29392.known	chr14	+	4554	12	FSM	ENSG00000198252.12	ENST00000442123.6	4554	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	132.387422937627	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGGTGGTTGTATTA	-18	True	NA	-14	True	ATTAAA	-11	NA	52730179	52774941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_52730211_52730458_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_29393.known	chr14	+	4864	11	FSM	ENSG00000198252.12	ENST00000354586.5	4864	11	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_7	34.580341236026	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAAAGCTCATTCATA	-32	True	NA	34	True	ATTAAA	-27	NA	52730165	52774989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_2940.nnic	chr1	-	1211	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	canonical	0	0	junction_9	462.507444050871	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172293_43193264
transcript_2941.nnic	chr1	-	1236	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	non_canonical	0	0	junction_9	462.507444050871	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172297_43193243
transcript_29410.nnic	chr14	-	3043	7	NNC	ENSG00000100522.10	novel	785	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.285830401377	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-20	True	NA	-23	True	AATAAA	-18	NA	52791668	52775192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_52775942_52776826_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_29411.nnic	chr14	-	2322	7	NNC	ENSG00000100522.10	novel	785	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	195.285830401377	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-20	True	NA	-23	True	AATAAA	-18	NA	52791668	52775192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_52775942_52777547_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_29412.nnic	chr14	-	3035	7	NNC	ENSG00000100522.10	novel	785	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.285830401377	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-20	True	NA	-23	True	AATAAA	-18	NA	52791668	52775192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_52775947_52776839_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_29414.known	chr14	-	785	7	FSM	ENSG00000100522.10	ENST00000557604.1	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	231.274488192902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAAGTTTGGATATA	-20	True	NA	NA	False	NA	NA	NA	52791668	52778374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52787832_52787872_52791427
transcript_29420.known	chr14	-	3867	6	FSM	ENSG00000100522.10	ENST00000216410.8	3867	6	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_4	40.7754828297594	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	41	True	NA	-23	True	AATAAA	-18	NA	52791607	52775192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_29425.nic	chr14	-	643	4	ISM	ENSG00000100522.10	ENST00000216410.8	3867	6	-61	6548	0	0	5prime_fragment	FALSE	canonical	3	470	junction_2	44.9221548904324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGACTTTGAGTTTCCA	-20	True	NA	-8	True	AATAAA	-22	NA	52791668	52781740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_52781912_52783422_52783486_52784496_52784665_52791427
transcript_29426.known	chr14	-	3247	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_13	52.3949106943286	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTTTTGTACTTG	247	False	NA	-9	True	AATAAA	-17	NA	52950992	52857274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_29427.known	chr14	-	3286	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	124.994203947256	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTACTTGTT	3	True	NA	-7	True	AATAAA	-19	NA	52951050	52857272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_29428.known	chr14	+	1433	1	FSM	ENSG00000288045.1	ENST00000657782.1	1433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACGGAAGTTTTTTCT	NA	False	NA	NA	False	AATACA	-31	NA	52951431	52952864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_52951400_52952900
transcript_29429.nic	chr14	-	1923	4	NIC	ENSG00000125378.16	novel	1931	4	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	15.3260852434302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	1899	False	NA	-2	True	AATAAA	-25	NA	53956870	53949735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_53950889_53951852_53952177_53953275_53953401_53956549
transcript_2943.nnic	chr1	-	1224	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	canonical	0	0	junction_9	462.507444050871	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172306_43193264
transcript_29430.known	chr14	-	1784	4	FSM	ENSG00000125378.16	ENST00000417573.5	1784	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.739839372653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATGATTTTTTTTTTC	4217	False	NA	-5	True	AATAAA	-22	NA	53954552	53949738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53954420
transcript_29431.known	chr14	-	1931	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	10.4986771653491	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-1	True	NA	-2	True	AATAAA	-25	NA	53956825	53949735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
transcript_29432.known	chr14	-	1708	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	11.115554667022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	1958	False	NA	-2	True	AATAAA	-25	NA	53956811	53949735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
transcript_29438.known	chr14	-	1705	3	FSM	ENSG00000125378.16	ENST00000558984.1	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCATGATTTTTTTTT	5314	False	NA	-7	True	AATAAA	-20	NA	53953455	53949740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_53950889_53951852_53952230_53953275
transcript_2944.nnic	chr1	-	1248	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	non_canonical	0	0	junction_9	462.507444050871	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172312_43193246
transcript_29441.known	chr14	+	874	9	NNC	ENSG00000100526.21	novel	938	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	337.059689632267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCGTTGTGTCTCTTT	0	True	NA	12	True	NA	NA	NA	54396954	54420214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411686_54412834_54412841_54415898_54415931_54417847_54417952_54419991
transcript_29442.known	chr14	+	938	9	FSM	ENSG00000100526.21	ENST00000556102.6	938	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	328.849889767353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	10	True	NA	16	True	NA	NA	NA	54397002	54420218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213_54418307_54419991
transcript_29443.known	chr14	+	841	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	49.2034510155206	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	14	True	NA	16	True	NA	NA	NA	54397006	54420218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_29447.nic	chr14	+	834	7	NIC	ENSG00000100526.21	novel	841	8	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	254.572026481047	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	NA	False	NA	16	True	NA	NA	NA	54396930	54420218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_2945.nnic	chr1	-	1242	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	non_canonical	0	0	junction_9	462.507444050871	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172312_43193252
transcript_29452.known	chr14	+	689	6	FSM	ENSG00000100526.21	ENST00000555837.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	273.945542033449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGGTGGGCGGTGCT	NA	False	NA	NA	False	AATACA	-11	NA	54396848	54417951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847
transcript_29454.known	chr14	-	4735	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_1	42.1040378111174	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTAGTTTATGCAT	-14	True	NA	-20	True	AATAAA	-17	NA	54441374	54423560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
transcript_29455.known	chr14	-	856	4	FSM	ENSG00000100528.12	ENST00000557659.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	327.667853507515	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGATGATTATATATGGATA	-16	True	NA	-74	True	NA	NA	NA	54441376	54427328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54430260_54430405_54436368_54436438_54441246
transcript_29456.known	chr14	-	1233	4	FSM	ENSG00000100528.12	ENST00000395573.8	1233	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	350.314461908472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTTTCAGTGCAT	-31	True	NA	-18	True	AATAAA	-12	NA	54441391	54426935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54427842_54432107_54432221_54436368_54436438_54441246
transcript_2946.nnic	chr1	-	1230	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20713	0	intron_retention	FALSE	canonical	0	0	junction_9	462.507444050871	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193283	43164345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172312_43193264
transcript_29460.known	chr14	-	4125	7	FSM	ENSG00000197045.13	ENST00000616146.4	4125	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	398.317468303306	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTCCAGCTTTTCT	-4	True	NA	-30	True	AATAAA	-12	NA	54489026	54474490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54478160_54479785_54479860_54480873_54480956_54481407_54481459_54482152_54482203_54483670_54483768_54488924
transcript_29467.known	chr14	-	6721	4	FSM	ENSG00000197045.13	ENST00000554908.5	6721	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	490.025169421599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTTTTCTTTTTTTA	-3	True	NA	-23	True	AATAAA	-19	NA	54489025	54474483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54480957_54481408_54481459_54483670_54483768_54488924
transcript_29471.nic	chr14	+	1382	7	NIC	ENSG00000100532.13	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	126.134518141017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	-16	True	NA	23	True	CATAAA	-25	NA	54509905	54538616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_54510064_54522453_54522594_54523149_54523246_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_29473.known	chr14	+	2092	7	FSM	ENSG00000100532.13	ENST00000679557.1	2092	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	115.645531210198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCTTCTGAATAGTAA	-16	True	NA	-6	True	AATAAA	-4	NA	54509905	54539271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530612_54530764_54530902_54531051_54537721_54537830_54538062
transcript_29478.known	chr14	+	1962	6	FSM	ENSG00000100532.13	ENST00000216420.12	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	20.519259245889	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	-16	True	NA	15	True	AATAAA	-25	NA	54509905	54539292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_29481.known	chr14	+	1937	6	FSM	ENSG00000100532.13	ENST00000679442.1	1937	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	75.0269284990396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGCAGAATGTGATCT	-17	True	NA	NA	False	ATTAAA	-29	NA	54509904	54539087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530406_54530902_54531051_54537721_54537830_54538062
transcript_29483.known	chr14	+	1827	6	FSM	ENSG00000100532.13	ENST00000556216.5	1827	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	86.636251073093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	-20	True	NA	23	True	CATAAA	-25	NA	54509901	54538616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54522453_54522594_54530048_54530764_54530902_54531051_54537721_54537830_54538062
transcript_29486.known	chr14	+	622	5	FSM	ENSG00000100532.13	ENST00000557755.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	115.361117799716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAATTCCTCTTCAGA	-10	True	NA	NA	False	NA	NA	NA	54509911	54538098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_54510064_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_29490.known	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	108.420485149256	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-24	True	NA	-16	True	AATAAA	-18	NA	55027099	54938948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_29494.known	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	138.385532320238	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-30	True	NA	-18	True	ATTAAA	-29	NA	55027105	54941158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
transcript_29501.nic	chr14	-	2622	19	ISM	ENSG00000198554.12	ENST00000360586.8	6019	26	-41	24041	-35	-21719	5prime_fragment	FALSE	canonical	0	0	junction_4	118.407866459565	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGATTTCAG	271	False	NA	-10	True	NA	NA	NA	55027140	54962989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_29503.nic	chr14	-	1962	15	ISM	ENSG00000198554.12	ENST00000360586.8	6019	26	-41	45847	-35	23520	5prime_fragment	FALSE	canonical	3	389	junction_2	45.5502077774781	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTTTGCATGGTGACCC	271	False	NA	NA	False	AAAAAG	-7	NA	55027140	54984795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_29509.known	chr14	+	6903	3	FSM	ENSG00000180008.9	ENST00000555846.2	6903	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	12	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGTTTTATTTTAA	-13	True	NA	17	True	ATTAAA	-22	NA	55027235	55049489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55027472_55031862_55031992_55042951
transcript_29515.known	chr14	+	6779	2	FSM	ENSG00000180008.9	ENST00000395472.2	6779	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	-19	True	NA	16	True	ATTAAA	-21	NA	55027229	55049488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55027472_55042951
transcript_29526.known	chr14	+	6466	4	FSM	ENSG00000168175.15	ENST00000395468.9	6466	4	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	85.8305824801911	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTCTTTTTTTCCTG	-26	True	NA	NA	False	NA	NA	NA	55051646	55070194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615
transcript_29531.known	chr14	+	2836	5	FSM	ENSG00000168175.15	ENST00000622254.1	2836	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	412.769533153793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGGAAACTTTTTTTA	10	True	NA	13	True	GATAAA	-21	NA	55051682	55069502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615_55066207_55069108
transcript_29532.known	chr14	+	958	6	FSM	ENSG00000131981.16	ENST00000254301.14	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	10.5375518978556	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCATTTAATTGGAGTG	1	True	NA	19	True	AATAAA	-26	NA	55129251	55145423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55145115
transcript_29533.known	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	324.359133747501	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	24	True	NA	12	True	AATAAA	-36	NA	55191544	55148111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_29540.known	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_6	116.728502131555	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-17	True	NA	-11	True	AATAAA	-13	NA	55191585	55148134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_29554.nic	chr14	-	2406	17	ISM	ENSG00000126787.13	ENST00000247191.7	2881	19	-56	3702	-33	-1509	5prime_fragment	FALSE	canonical	3	963	junction_4	111.975932123827	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATTTCAGATGTTGT	NA	False	NA	NA	False	NA	NA	NA	55191641	55151836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_29558.known	chr14	-	4715	10	FSM	ENSG00000126775.9	ENST00000247178.6	4715	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	9.91071249821234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCATGTGTATGTCT	0	True	NA	-5	True	AATAAA	-14	NA	55411830	55366390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_29561.nic	chr14	-	428	4	ISM	ENSG00000126775.9	ENST00000247178.6	4715	10	-20	24529	-20	-24528	5prime_fragment	FALSE	canonical	3	48	junction_1	9.0921211313239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAAAAGTAAGTAATTC	61	False	NA	NA	False	AAGAAA	-1	NA	55411850	55390919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_55390993_55395939_55395983_55397371_55397435_55411601
transcript_29564.known	chr14	-	2037	7	FSM	ENSG00000182521.5	ENST00000247219.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.687184270936277	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGAACTGTACAAATGT	5867	False	NA	NA	False	NA	NA	NA	55440616	55413540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55414456_55424158_55424254_55428806_55428975_55433629_55433722_55435846_55435935_55436560_55437019_55440395
transcript_29566.nic	chr14	-	389	3	ISM	ENSG00000186615.12	ENST00000412224.6	2185	4	-44	3154	-11	-3140	5prime_fragment	FALSE	canonical	1	4	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAATGGATGCAAG	101	False	NA	NA	False	NA	NA	NA	55580154	55561125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_55561164_55578605_55578738_55579935
transcript_29567.known	chr14	-	1465	3	FSM	ENSG00000186615.12	ENST00000335142.6	1534	3	69	0	22	0	multi-exon	FALSE	canonical	3	23	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATTAAAATGTGAAT	181	False	NA	-36	True	NA	NA	NA	55580074	55576185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_55577380_55578605_55578738_55579935
transcript_29571.nnic	chr14	+	529	4	NNC	ENSG00000259868.3	novel	955	2	NA	NA	1706	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	7.58653778449403	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTAAGGTGTTTTGT	NA	False	NA	7	True	AATAAA	-21	NA	55958188	55962970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_55958359_55961980_55962088_55962171_55962278_55962824
transcript_29579.known	chr14	-	2956	5	FSM	ENSG00000165588.19	ENST00000339475.10	2956	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	441.887711981223	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-1	True	NA	-3	True	AATGAA	-19	NA	56810448	56799904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56810375
transcript_29581.known	chr14	-	3011	5	FSM	ENSG00000165588.19	ENST00000672264.2	3011	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	400.064604157878	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-7	True	NA	-3	True	AATGAA	-19	NA	56810479	56799904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804364_56805359_56805576_56810158_56810223_56810375
transcript_29587.known	chr14	-	715	4	FSM	ENSG00000165588.19	ENST00000554559.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	88.2886679528516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTTGGGGGCATGGAC	-7	True	NA	NA	False	NA	NA	NA	56810479	56802024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56805359_56805576_56810158_56810223_56810375
transcript_29588.known	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	863	junction_2	77	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-5	True	NA	-15	True	ATTAAA	-16	NA	56805667	56800706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804340_56805359
transcript_29589.known	chr14	-	908	3	FSM	ENSG00000165588.19	ENST00000554845.2	1086	3	0	178	0	-103	multi-exon	FALSE	canonical	3	170	junction_2	423.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAGTCCCCAGCTTCTC	6556	False	NA	NA	False	NA	NA	NA	56805648	56801912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56804187_56804364_56805359
transcript_29590.known	chr14	-	835	2	FSM	ENSG00000165588.19	ENST00000554788.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCTTAACTTCAATGC	6556	False	NA	NA	False	NA	NA	NA	56805648	56801809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_56802356_56805359
transcript_29592.known	chr14	-	624	2	FSM	ENSG00000258592.1	ENST00000551408.2	624	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACCCTTGGGAAGGATA	NA	False	NA	NA	False	NA	NA	NA	57112660	57067007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_57067166_57112194
transcript_29593.known	chr14	-	10486	18	FSM	ENSG00000070367.16	ENST00000621441.5	10486	18	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_5	53.4762502664552	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAATTGTTGTTTTTG	-40	True	NA	-4	True	AATAAA	-18	NA	57268905	57200506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_29596.known	chr14	-	2632	17	FSM	ENSG00000070367.16	ENST00000340918.11	2632	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_14	121.061709470831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCATCAATTGTTAATC	-34	True	NA	NA	False	AATACA	-41	NA	57268899	57208159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57246710_57246859_57247617_57247713_57268621
transcript_29599.known	chr14	-	772	5	FSM	ENSG00000070367.16	ENST00000554598.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	50.0949099210688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATGATTTTCTTTGCC	42	True	NA	NA	False	AATAAA	-13	NA	57268823	57239527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_296.nic	chr1	-	2074	3	NIC	ENSG00000127054.22	novel	1104	4	NA	NA	-20	0	intron_retention	FALSE	canonical	3	473	junction_1	21	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	NA	False	NA	-16	True	AATGAA	-15	NA	1324707	1318680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1320530_1320995_1321094_1324580
transcript_29600.known	chr14	+	1815	9	FSM	ENSG00000053770.12	ENST00000431972.6	1815	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	111.034622978601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCATAATCTTAT	-7	True	NA	NA	False	TTTAAA	-26	NA	57269055	57288925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57269389_57273708_57273751_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29602.nnic	chr14	+	2449	8	NNC	ENSG00000053770.12	novel	11675	8	NA	NA	-24	-557	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	89.4281150148097	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGTGTGTAATCTCTG	-4	True	NA	14	True	AATAAA	-18	NA	57268899	57289517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_57269389_57274243_57274818_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29603.nnic	chr14	+	3006	8	NNC	ENSG00000053770.12	novel	11675	8	NA	NA	-24	0	intron_retention	FALSE	canonical	3	30	junction_2	89.4281150148097	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATCTTGGGTTCTGTTT	-4	True	NA	15	True	ATTAAA	-19	NA	57268899	57290074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_57269389_57274243_57274818_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29604.known	chr14	+	11675	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	31.9948975523872	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAAGTGTTTTATA	0	True	NA	7	True	AATAAA	-17	NA	57268970	57298742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29608.nic	chr14	+	2865	8	NIC	ENSG00000053770.12	novel	11675	8	NA	NA	-130	0	intron_retention	FALSE	canonical	3	33	junction_1	80.3766642954614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATCTTGGGTTCTGTTT	209	False	NA	15	True	ATTAAA	-19	NA	57268793	57290074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_57269070_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29613.nic	chr14	+	2361	7	NIC	ENSG00000053770.12	novel	11675	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_1	95.3601360923712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATCTTGGGTTCTGTTT	0	True	NA	15	True	ATTAAA	-19	NA	57268970	57290074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_57269389_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_29616.known	chr14	+	1691	2	FSM	ENSG00000053770.12	ENST00000554931.1	1691	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGAGAGAGACAGGC	-1	True	NA	NA	False	NA	NA	NA	57268923	57275469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57269389_57274243
transcript_29620.known	chr14	+	1294	4	FSM	ENSG00000139977.14	ENST00000555166.5	1294	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	105.607238809131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAAGAGATAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	57390543	57410330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57390706_57396751_57396876_57399827_57399884_57409378
transcript_29621.known	chr14	+	7600	5	FSM	ENSG00000139977.14	ENST00000556492.6	7600	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	18.6077940659284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGACTTAACTAGGTAAA	-9	True	NA	11	True	AATAAA	-24	NA	57390585	57415906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_57390706_57390956_57391729_57396751_57396876_57399827_57399884_57409378
transcript_29622.known	chr14	-	6495	8	FSM	ENSG00000139971.15	ENST00000267485.7	6495	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	11.7438650940369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGGCCTGGTAGCGC	-14	True	NA	NA	False	AATACA	-6	NA	58152213	58000760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58004805_58005047_58005183_58012118_58012151_58096723_58096982_58131511_58131722_58133089_58133342_58137989_58139415_58152074
transcript_29625.nnic	chr14	-	1640	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29011	-2723	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	35.4400902933387	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGTCACTGTGGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	58033035	58003483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_29626.nnic	chr14	-	1070	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29011	-3293	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	35.4400902933387	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTTTGCTGTCTTAAA	NA	False	NA	-3	True	ATTAAA	-18	NA	58033035	58004053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_29630.nnic	chr14	-	632	3	NIC	ENSG00000257621.9	novel	903	4	NA	NA	0	-28	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	59.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAAATTTATA	-7	True	NA	NA	False	NA	NA	NA	58298132	58267012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_58267394_58291634_58291708_58297954
transcript_29633.known	chr14	+	2408	13	FSM	ENSG00000131966.14	ENST00000254286.9	2408	13	0	0	0	0	multi-exon	FALSE	non_canonical	2	206	junction_5	67.9362446219493	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTCATTCTTT	3	True	NA	16	True	AATGAA	-17	NA	58200148	58235636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_29635.nnic	chr14	+	1551	12	NIC	ENSG00000131966.14	novel	2408	13	NA	NA	-18	0	combination_of_known_splicesites	FALSE	non_canonical	2	9	junction_7	124.50656327086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTTTGGAAGTTTGT	-22	True	NA	14	True	AATAAA	-14	NA	58200123	58234790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_29641.known	chr14	+	540	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_3	17.2111075245674	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGTATGGCACACAG	24	True	NA	NA	False	AATAAA	-18	NA	58200169	58209257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
transcript_29643.known	chr14	+	1602	13	FSM	ENSG00000131966.14	ENST00000545307.6	1602	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	115.394853534385	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTATATCAATAAAGTA	NA	False	NA	-16	True	NA	NA	NA	58200079	58234760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211411_58213640_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_29644.known	chr14	+	1517	13	FSM	ENSG00000131966.14	ENST00000555229.5	1517	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	115.394853534385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGTATTTATATCAATA	-4	True	NA	-21	True	NA	NA	NA	58200141	58234755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211393_58213640_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_29647.known	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_10	227.092161907891	3041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	-23	True	NA	26	True	ATTAAA	-15	NA	58244842	58272004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_29650.known	chr14	+	908	11	FSM	ENSG00000100567.13	ENST00000412908.6	908	11	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_5	841.219329307167	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTAATATCTGCTTT	11	True	NA	34	True	ATTAAA	-23	NA	58244876	58272012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260968_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_29660.known	chr14	+	814	10	FSM	ENSG00000100567.13	ENST00000557508.5	814	10	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_1	830.074427720524	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTTTGGTTAATATCT	38	True	NA	29	True	ATTAAA	-18	NA	58244903	58272007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_29670.known	chr14	+	925	5	FSM	ENSG00000100567.13	ENST00000553665.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2522	junction_3	260.745445789567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTTCAATAGT	-10	True	NA	NA	False	AATAGA	-33	NA	58244855	58258454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924
transcript_29672.known	chr14	-	741	5	FSM	ENSG00000257621.9	ENST00000554378.5	741	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.9343210784909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAACCCAGGAGGCAG	-9	True	NA	NA	False	NA	NA	NA	58298134	58267103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58267394_58273978_58274011_58285590_58285757_58291634_58291708_58297954
transcript_29682.known	chr14	-	1039	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	34.6538437823121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTAAGCATTCTTTC	23	False	NA	NA	False	NA	NA	NA	58298102	58266607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
transcript_29683.known	chr14	-	903	4	FSM	ENSG00000257621.9	ENST00000555275.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	38.9643711898732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGACTGGTGAAGACATC	3	True	NA	NA	False	TATAAA	-43	NA	58298122	58266888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58267394_58273978_58274136_58291634_58291708_58297954
transcript_29696.known	chr14	-	1983	3	FSM	ENSG00000257621.9	ENST00000555707.5	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	46	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGACTCATGTATTG	-4	True	NA	NA	False	AATAAA	-16	NA	58298129	58272400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58274136_58291634_58291708_58297954
transcript_29697.known	chr14	-	604	3	FSM	ENSG00000257621.9	ENST00000556400.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	39	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAGGCAGGAGACTC	10	True	NA	NA	False	NA	NA	NA	58298115	58273640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58274011_58291634_58291708_58297954
transcript_29698.known	chr14	+	435	2	FSM	ENSG00000100567.13	ENST00000554456.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGAATCCTTCAGTT	8	True	NA	2	True	AATAAA	-17	NA	58244873	58245478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58244942_58245111
transcript_29699.known	chr14	+	730	3	FSM	ENSG00000100567.13	ENST00000557290.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_2	79	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	NA	False	NA	26	True	ATTAAA	-15	NA	58269974	58272004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58270486_58270933_58270999_58271850
transcript_29700.nic	chr14	+	2460	20	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-87	7966	-35	-1040	5prime_fragment	FALSE	canonical	3	27	junction_7	9.58212786990632	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATTTGAATGATGATA	NA	False	NA	NA	False	AATAAA	-37	NA	58298468	58364260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072_58351324_58353657_58353856_58359131_58359217_58360900_58361043_58364169
transcript_29702.nic	chr14	+	2183	18	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-87	13054	-35	0	5prime_fragment	FALSE	canonical	3	27	junction_7	9.8156008864076	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAAAGGTGGACCAAAG	NA	False	NA	NA	False	NA	NA	NA	58298468	58359172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072_58351324_58353657_58353856_58359131
transcript_29705.nic	chr14	+	1687	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-30	21103	22	-8049	5prime_fragment	FALSE	canonical	3	27	junction_7	9.09798512492372	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGAAAACAGAAGACAA	-16	True	NA	NA	False	ATTAAA	-13	NA	58298525	58351123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_29706.nic	chr14	+	1779	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-47	21028	5	-7974	5prime_fragment	FALSE	canonical	3	27	junction_7	9.09798512492372	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAAGAAAATGAGCT	-33	True	NA	NA	False	NA	NA	NA	58298508	58351198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_29707.nic	chr14	+	1958	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-172	20974	-120	-7920	5prime_fragment	FALSE	canonical	3	27	junction_7	9.09798512492372	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAAATTAAAAAACA	NA	False	NA	NA	False	AATACA	-13	NA	58298383	58351252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_29708.nic	chr14	+	1480	15	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-24	24498	-23	-11444	5prime_fragment	FALSE	canonical	3	27	junction_7	9.33831256880241	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAAAAGACTTAGA	-10	True	NA	NA	False	AGTAAA	-2	NA	58298531	58347728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646
transcript_29713.nnic	chr14	+	1390	14	NIC	ENSG00000032219.19	novel	5562	23	NA	NA	22	-11442	combination_of_known_splicesites	FALSE	canonical	3	3	junction_13	15.8386838255407	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGACTTAGAAG	-16	True	NA	NA	False	AGTAAA	-4	NA	58298525	58347730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347646
transcript_29717.nic	chr14	+	696	8	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-30	48727	22	-6670	5prime_fragment	FALSE	canonical	3	27	junction_7	10.9283379993744	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAAAGCAGTGAAG	-16	True	NA	NA	False	NA	NA	NA	58298525	58323499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484
transcript_29719.known	chr14	+	8558	31	FSM	ENSG00000100578.18	ENST00000652326.2	8558	31	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	10.8962786715873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATATGTTTCTTATTG	6	True	NA	NA	False	AATAAA	-23	NA	58427718	58551297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
transcript_29721.nic	chr14	+	1935	10	ISM	ENSG00000100578.18	ENST00000650845.1	6431	29	-54	65464	-19	-495	5prime_fragment	FALSE	canonical	3	50	junction_1	7.16645133182093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAACAAATAGCAT	234	False	NA	NA	False	NA	NA	NA	58427664	58456783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701
transcript_29723.known	chr14	-	1252	6	FSM	ENSG00000100575.14	ENST00000395159.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	78.6318001828777	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATGCATGATCCTTTT	-5	True	NA	-6	True	CATAAA	-19	NA	58427531	58408494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053_58427243_58427391
transcript_29729.known	chr14	+	376	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGATCGTCAGATACAT	22	False	NA	NA	False	NA	NA	NA	58794653	58795029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_58794700_58795000
transcript_29730.known	chr14	+	5890	25	FSM	ENSG00000100592.16	ENST00000360909.8	5890	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_14	13.5968107984516	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	-29	True	NA	22	True	AATAAA	-22	NA	59188666	59371403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
transcript_29731.nic	chr14	+	3131	24	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-47	3856	-26	0	5prime_fragment	FALSE	canonical	3	93	junction_14	13.406541303276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGAGAAAGAAAAAGGAGG	NA	False	NA	NA	False	AAGAAA	-8	NA	59188619	59367547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428
transcript_29733.nic	chr14	+	1574	13	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-47	40887	-26	4401	5prime_fragment	FALSE	canonical	3	107	junction_8	12.2938557372734	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGAAACTGGAAAAGAAAG	NA	False	NA	1	True	NA	NA	NA	59188619	59330516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500
transcript_29734.nic	chr14	+	1654	13	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-47	40807	-26	4481	5prime_fragment	FALSE	canonical	3	107	junction_8	12.2938557372734	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAGAAACTTGAAAAG	NA	False	NA	81	True	AATAAA	-2	NA	59188619	59330596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500
transcript_29735.nnic	chr14	+	1677	13	NNC	ENSG00000100592.16	novel	5890	25	NA	NA	-4	4401	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	30.768287245149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGAAACTGGAAAAGAAAG	-33	True	NA	1	True	NA	NA	NA	59188662	59330516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_59188915_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500
transcript_29736.nnic	chr14	+	1692	13	NNC	ENSG00000100592.16	novel	5890	25	NA	NA	29	4481	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	30.768287245149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAGAAACTTGAAAAG	32	True	NA	81	True	AATAAA	-2	NA	59188727	59330596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_59188915_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500
transcript_29737.nic	chr14	+	1549	12	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-47	44421	-26	867	5prime_fragment	FALSE	canonical	3	107	junction_8	12.4615109917837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAGGTAAATAATGA	NA	False	NA	NA	False	AATGAA	-38	NA	59188619	59326982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932
transcript_29739.nnic	chr14	+	1587	12	NNC	ENSG00000100592.16	novel	5890	25	NA	NA	29	867	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	32.135559974521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAGGTAAATAATGA	32	True	NA	NA	False	AATGAA	-38	NA	59188727	59326982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_59188915_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932
transcript_29743.known	chr14	+	2524	8	FSM	ENSG00000050130.18	ENST00000356057.9	2524	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	284.656040203769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTCAATTGAGTA	257	False	NA	69	True	ATTAAA	-15	NA	59484442	59505404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59484989_59485117_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29745.known	chr14	+	1636	7	FSM	ENSG00000050130.18	ENST00000425728.6	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	183.733200290228	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCAATGTTTTGA	-21	True	NA	5	True	AATAAA	-13	NA	59484502	59504703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29748.known	chr14	+	2347	7	FSM	ENSG00000050130.18	ENST00000616435.5	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	102.788888288353	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	-7	True	NA	75	True	ATTAAA	-21	NA	59484516	59505410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29751.known	chr14	+	1191	7	FSM	ENSG00000050130.18	ENST00000553941.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	237.317941916652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAATATTATCTGCTACA	45	False	NA	NA	False	NA	NA	NA	59484568	59504274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59484594_59486680_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29754.known	chr14	+	2137	7	FSM	ENSG00000050130.18	ENST00000554271.5	2137	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	238.39509689216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	21	True	NA	7	True	AATAAA	-15	NA	59484544	59504705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_59485117_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29758.nic	chr14	+	1575	6	NIC	ENSG00000050130.18	novel	1636	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	231.84788116349	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	-32	True	NA	7	True	AATAAA	-15	NA	59484491	59504705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_29765.known	chr14	-	1516	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	27.5227178890458	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-1	True	NA	NA	False	ATTAAA	-34	NA	59484408	59472605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
transcript_29766.known	chr14	-	1703	7	FSM	ENSG00000139970.18	ENST00000342503.8	1703	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	8.39477350630868	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTCTCTTCTCATGCA	-1	True	NA	-1	True	AATAAA	-21	NA	59630814	59595976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59630445
transcript_29775.known	chr14	+	18069	11	FSM	ENSG00000126773.13	ENST00000406854.6	18069	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	32.2690253958808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	-42	True	NA	NA	False	AATAAA	-16	NA	60091922	60148221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60092420_60107585_60108328_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_29776.known	chr14	+	17339	10	FSM	ENSG00000126773.13	ENST00000317623.8	17339	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	22.7351905399732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	-54	True	NA	NA	False	AATAAA	-16	NA	60091910	60148221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60092420_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_29778.known	chr14	-	1956	7	FSM	ENSG00000100612.14	ENST00000557185.6	1956	7	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	12.3243210315574	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGCTTAGTATTAGT	-4	True	NA	NA	False	ATTAAA	-26	NA	60165398	60144118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60145014_60149352_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_29781.known	chr14	-	1361	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	13.4966662550424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAATAAATAAAAAA	4610	False	NA	-38	True	NA	NA	NA	60165293	60148947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_29782.known	chr14	-	924	4	FSM	ENSG00000100612.14	ENST00000556502.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	5.79271573232759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGATAATAAGATGT	-10	True	NA	NA	False	NA	NA	NA	60165350	60152688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60153179_60153958_60154066_60155999_60156153_60165176
transcript_29783.known	chr14	-	2780	18	FSM	ENSG00000179008.9	ENST00000321731.8	2780	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.9215295678475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATGTGACTGTTGA	-18	True	NA	NA	False	AATAAA	-14	NA	60486063	60435955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60437048_60442073_60442132_60455000_60455146_60456916_60457096_60458677_60458740_60461353_60461413_60461507_60461594_60465978_60466056_60466916_60467045_60468444_60468537_60469532_60469654_60471416_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_29785.nic	chr14	-	929	6	NIC	ENSG00000179008.9	novel	2780	18	NA	NA	-24	347	intron_retention	FALSE	canonical	3	9	junction_3	2.13541565040626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCATCTTGGAT	5245	False	NA	NA	False	ATTAAA	-16	NA	60486087	60471284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_2979.known	chr1	-	1352	9	FSM	ENSG00000117395.13	ENST00000236051.3	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_6	80.4794228359026	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCTCATTTCCTTTGT	-5	True	NA	-9	True	GATAAA	-16	NA	43172290	43164183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
transcript_29796.nnic	chr14	+	1281	8	NNC	ENSG00000020426.11	novel	680	5	NA	NA	-11734	0	intron_retention	FALSE	canonical	3	30	junction_1	143.79151574415	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	NA	False	NA	11	True	AATAAA	-16	NA	60723007	60968678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_60723119_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_29797.known	chr14	+	2648	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_6	37.7164501543411	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTAGTTGCTATTGC	-9	True	NA	NA	False	AATAAA	-27	NA	60734760	60969965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_298.known	chr1	-	2428	2	FSM	ENSG00000127054.22	ENST00000496353.1	2428	2	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTATCTTTTTTG	46	False	NA	-32	True	NA	NA	NA	1324611	1318696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1321094_1324580
transcript_2980.known	chr1	-	1486	3	FSM	ENSG00000253313.6	ENST00000523677.6	1486	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	3	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCACTCATTTTTATTT	0	True	NA	-16	True	AATAAA	-30	NA	43285581	43281876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43283108_43283251_43283369_43285443
transcript_29802.known	chr14	+	1220	7	FSM	ENSG00000020426.11	ENST00000539616.6	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	163.191520068361	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	6	True	NA	11	True	AATAAA	-16	NA	60734775	60968678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60879713_60879836_60968228
transcript_29808.known	chr14	+	1097	4	FSM	ENSG00000020426.11	ENST00000556764.5	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	30.4010233745876	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTTTTGAAAATATC	3	True	NA	NA	False	TATAAA	-36	NA	60734772	60809015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324
transcript_29809.known	chr14	+	612	2	FSM	ENSG00000020426.11	ENST00000555545.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGCAACTTGCTGTC	-28	True	NA	NA	False	NA	NA	NA	60734741	60753954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60734952_60753552
transcript_2981.known	chr1	-	629	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	54.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACCCCACTTCCCTGA	-4	True	NA	NA	False	GGGGCT	-21	NA	43285617	43282660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43283108_43283251_43283369_43285552
transcript_29810.nic	chr14	+	1638	17	NIC	ENSG00000139974.16	novel	2501	21	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_15	21.8638364371398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTTTGTTGTG	-26	True	NA	10	True	AATAAA	-21	NA	60981211	61083733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078829_61078928_61083549
transcript_29812.known	chr14	+	1605	16	FSM	ENSG00000139974.16	ENST00000267488.9	1605	16	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_15	12.6325857298584	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGGGTTGATCTTTTG	7	True	NA	NA	False	AAAAAG	-25	NA	60981244	61052630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
transcript_29836.known	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	11.7127067751225	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-13	True	NA	0	True	AATAAA	-30	NA	60981079	60971440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
transcript_29837.nic	chr14	-	2044	5	NIC	ENSG00000126814.7	novel	5304	5	NA	NA	-280	-3570	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	38.2393776099978	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTACTTTGCCTTATT	255	False	NA	1	True	AATAAA	-29	NA	60981450	60975010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60981023
transcript_29839.known	chr14	+	3922	15	FSM	ENSG00000100644.17	ENST00000394997.5	3922	15	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	213.126339842578	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	18	False	NA	19	True	AATAAA	-19	NA	61695539	61748258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_61695840_61720378_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
transcript_2984.known	chr1	-	661	3	FSM	ENSG00000234694.2	ENST00000424948.2	679	3	18	0	18	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	9387	False	NA	0	True	NA	NA	NA	43358658	43354683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43355007_43357802_43357901_43358418
transcript_29840.known	chr14	+	3555	14	FSM	ENSG00000100644.17	ENST00000323441.10	3555	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	245.731055178807	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	96	False	NA	19	True	AATAAA	-19	NA	61695776	61748258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61746933
transcript_29846.nic	chr14	+	1680	10	ISM	ENSG00000100644.17	ENST00000337138.9	3946	15	-69	10102	-69	-2742	5prime_fragment	FALSE	canonical	3	685	junction_1	100.937946956546	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAAAAATTACAGAATATAA	31	False	NA	2	True	NA	NA	NA	61695443	61738156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086
transcript_29847.known	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	25.8929419812513	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	3	True	NA	13	True	AATAAA	-18	NA	61762419	61796428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
transcript_29855.nic	chr14	+	994	8	ISM	ENSG00000023608.5	ENST00000216294.5	2593	10	-32	14086	-32	-14086	5prime_fragment	FALSE	canonical	3	172	junction_4	21.8033886151222	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAAGAAAGATTGAA	2	True	NA	NA	False	NA	NA	NA	61762387	61782342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246
transcript_29857.known	chr14	-	976	4	FSM	ENSG00000140006.12	ENST00000554717.1	976	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	52.4679796532027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTATAAACAGATTTACT	-4	True	NA	NA	False	NA	NA	NA	63641853	63599262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_63599974_63624927_63625034_63641298_63641408_63641803
transcript_2986.known	chr1	+	1649	11	FSM	ENSG00000117399.14	ENST00000310955.11	1649	11	0	0	0	0	multi-exon	TRUE	canonical	3	1218	junction_1	223.637228564477	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	2	True	NA	55	True	AATAAA	-32	NA	43358980	43363203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43359007_43359166_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_29861.known	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	18.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-22	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_63599974_63624927_63625034_63641803
transcript_29866.nic	chr14	+	314	2	FSM	ENSG00000274015.3	ENST00000686344.1	314	2	-18	18	8	-18	multi-exon	FALSE	canonical	3	56	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	687	False	NA	23	True	AATGAA	-27	NA	63642042	63651490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_63642198_63651331
transcript_29867.known	chr14	+	554	1	FSM	ENSG00000274015.3	ENST00000620835.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTGTGCCTAGCTG	-4	True	NA	NA	False	AATAAA	-19	NA	63642142	63642696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_63642100_63642700
transcript_29868.known	chr14	-	3336	3	FSM	ENSG00000126821.8	ENST00000247225.7	3336	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTTTTGCTTTGTTTTG	-11	True	NA	-15	True	AATAAA	-20	NA	63728065	63684215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_63686657_63698568_63698659_63727260
transcript_2987.known	chr1	+	1777	10	FSM	ENSG00000117399.14	ENST00000372462.1	1777	10	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_2	127.287174103906	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	9	False	NA	55	True	AATAAA	-32	NA	43359012	43363203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_29872.known	chr14	+	3229	24	FSM	ENSG00000054654.20	ENST00000674003.1	3229	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.80493758544162	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAGCTTAGTGACAATA	43	False	NA	NA	False	AATAGA	-10	NA	63761898	63995099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_63761987_63852500_63852754_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736_63983887_63986455_63986618_63990410_63990570_63990941_63991116_63993834_63993970_63995043
transcript_29877.known	chr14	+	3154	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_8	123.394990705209	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	18	True	NA	9	True	AATAAA	-38	NA	64388352	64460025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_2988.known	chr1	-	973	8	FSM	ENSG00000066322.15	ENST00000497050.5	973	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	74.7736721100169	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATGTATGGCACCATC	307	False	NA	NA	False	NA	NA	NA	43367738	43364049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
transcript_29883.known	chr14	+	6814	27	FSM	ENSG00000100714.17	ENST00000545908.6	6814	27	0	0	0	0	multi-exon	TRUE	canonical	2	40	junction_26	309.628315544593	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCAGTTCCCTTTT	114	False	NA	6	True	AATAAA	-19	NA	64388030	64463457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64459758
transcript_2989.known	chr1	-	1466	8	FSM	ENSG00000066322.15	ENST00000372458.8	1466	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	26.1744539736042	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-17	True	NA	-5	True	ATTAAA	-18	NA	43368011	43363400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_29890.known	chr14	+	3082	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_8	106.63324809833	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGTAGTGCTAACAT	27	True	NA	47	True	NA	NA	NA	64388361	64455173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
transcript_299.nic	chr1	-	1234	5	ISM	ENSG00000162576.17	ENST00000309212.11	2293	10	4105	0	24	0	3prime_fragment	FALSE	canonical	3	101	junction_2	16.7835484924971	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCCCAGGTATGCTT	7347	False	NA	-13	True	AATAAA	-19	NA	1354450	1352690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353
transcript_29906.known	chr14	-	10365	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	17.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGTGTCCTTTCATG	-20	True	NA	-4	True	AATAAA	-18	NA	64503838	64478050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_64488058_64490360_64490541_64503660
transcript_29907.known	chr14	+	2497	1	FSM	ENSG00000126803.10	ENST00000247207.7	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTCTTGGAGTTTTC	-1	True	NA	17	True	AGTAAA	-19	NA	64540740	64543237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64540700_64543200
transcript_29908.known	chr14	+	3295	29	FSM	ENSG00000100714.17	ENST00000554768.6	3295	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	422.625158071185	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCCATCTTGGTGTTG	-27	True	NA	8	True	AATAAA	-9	NA	64388307	64459996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64388469_64389000_64389126_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_29909.known	chr14	+	1400	13	FSM	ENSG00000165807.8	ENST00000467261.5	1400	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.39646730742473	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTAAACTACTTTGACTT	10	True	NA	-18	True	NA	NA	NA	64549939	64589357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64550067_64550920_64550986_64551633_64551688_64552813_64552862_64564750_64564838_64565356_64565455_64565625_64565693_64568348_64568448_64574454_64574590_64586836_64586880_64587193_64587373_64588103_64588296_64589151
transcript_2991.nic	chr1	-	1407	7	NIC	ENSG00000066322.15	novel	1625	8	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	94.9274576833396	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-9	True	NA	-5	True	ATTAAA	-18	NA	43367714	43363400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365563_43365624_43367485
transcript_29911.nic	chr14	+	2792	14	NIC	ENSG00000125954.13	novel	1468	14	NA	NA	-24	847	combination_of_known_junctions	FALSE	canonical	1	10	junction_3	573.232451791577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	1	True	NA	8	True	AATAAA	-15	NA	64914460	65062650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_64914535_64923990_64924127_64926006_64926081_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_29912.known	chr14	+	1468	14	FSM	ENSG00000125954.13	ENST00000549987.1	1468	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	685.574703847956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTATACGTTTCAATA	33	True	NA	NA	False	NA	NA	NA	64914492	65061361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_29913.known	chr14	+	1847	13	FSM	ENSG00000125954.13	ENST00000552941.6	1847	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	596.831960344693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGCCTCTGCCTCTCGA	25	True	NA	NA	False	NA	NA	NA	64914484	65061803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_29915.known	chr14	+	3518	4	FSM	ENSG00000258289.10	ENST00000549115.7	3518	4	0	0	0	0	multi-exon	FALSE	canonical	3	1695	junction_2	238.009803719651	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTTTTTACTT	-5	True	NA	16	True	AATAAA	-26	NA	64914454	64935368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64932137
transcript_29917.known	chr14	+	1023	4	FSM	ENSG00000258289.10	ENST00000551093.6	1023	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	940.650956637063	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATTTGTTGAGATGAG	17	True	NA	NA	False	NA	NA	NA	64914476	64944056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64943298
transcript_29918.known	chr14	+	3615	4	FSM	ENSG00000258289.10	ENST00000607599.6	3615	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	852.387366296699	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTTTTTACTT	NA	False	NA	16	True	AATAAA	-26	NA	64914360	64935368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64926006_64926081_64932137
transcript_29919.known	chr14	+	439	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	1058	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCATATTTTTTTTC	NA	False	NA	54	True	AATACA	-41	NA	64914414	64932320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64932137
transcript_2992.known	chr1	-	828	7	FSM	ENSG00000066322.15	ENST00000487209.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	74.0714744914217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTGACCAAGGCTT	-5	True	NA	NA	False	NA	NA	NA	43367999	43363835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365563_43365624_43367914
transcript_29920.known	chr14	+	1521	3	FSM	ENSG00000258289.10	ENST00000551947.6	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1121	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATCTCTGTCTCCAAA	-17	True	NA	NA	False	AATATA	-18	NA	64914442	64944591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990_64924127_64943298
transcript_29921.known	chr14	+	571	2	FSM	ENSG00000258289.10	ENST00000556089.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	2260	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACAGTATAATACCATG	-2	True	NA	NA	False	NA	NA	NA	64914457	64924484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64914535_64923990
transcript_29922.known	chr14	-	922	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCAGCCTGTGTGTGTGT	2	True	NA	NA	False	AATAAA	-16	NA	64942745	64939157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_64939839_64942504
transcript_29923.known	chr14	-	3437	7	FSM	ENSG00000139998.16	ENST00000533601.7	3437	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	25.6168347424545	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGGCTGCCTGGATG	-44	True	NA	-5	True	AATAAA	-16	NA	64972336	64945815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64971952
transcript_29928.known	chr14	+	2711	12	FSM	ENSG00000257365.8	ENST00000246166.3	2711	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	14.4239241115883	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	4	True	NA	8	True	AATAAA	-15	NA	64986894	65062650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_29932.known	chr14	-	2010	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	114.998913038341	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	241	False	65102536	-3	True	AATAAA	-17	NA	65102517	65075126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_29934.known	chr14	-	1973	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	50.9901951359278	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	-8	True	NA	0	True	AATAAA	-20	NA	65102504	65075123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
transcript_29936.known	chr14	-	897	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	57.0633176587396	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGTACCTCTTTTT	-13	True	NA	NA	False	AATAAA	-19	NA	65102509	65083743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
transcript_29937.known	chr14	-	585	3	FSM	ENSG00000125952.20	ENST00000556443.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_2	60	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGAGTGTTAGAGCCG	241	False	65102536	NA	False	NA	NA	NA	65102517	65077773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65078037_65093707_65093816_65102303
transcript_29938.known	chr14	-	574	4	FSM	ENSG00000125952.20	ENST00000555667.5	574	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	163.994579856233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATTAAATGGGTTG	241	False	65102536	NA	False	AATAAA	-8	NA	65102517	65077300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65102303
transcript_29940.known	chr14	+	5166	11	FSM	ENSG00000033170.17	ENST00000360689.9	5166	11	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	26.0478406014779	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	13	False	NA	15	True	AATAAA	-16	NA	65410591	65744121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_29942.known	chr14	+	4249	11	FSM	ENSG00000033170.17	ENST00000673929.1	4249	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	18.4813419426188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	-40	True	NA	15	True	AATAAA	-16	NA	65412729	65744121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_29943.known	chr14	+	2269	10	FSM	ENSG00000033170.17	ENST00000557164.5	2269	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.3413098071859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATAAGGTTGTCTGT	-7	True	NA	32	True	NA	NA	NA	65411873	65742936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_65411994_65455620_65455719_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_29944.known	chr14	+	3559	10	FSM	ENSG00000033170.17	ENST00000394586.6	3559	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.17608239856	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAGTTTCTAGAAT	543	False	NA	18	True	AATAAA	-14	NA	65411121	65743142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_65411994_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_29946.known	chr14	+	2490	9	FSM	ENSG00000033170.17	ENST00000342677.10	2490	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	41.514304763539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAGTTTCTAGAAT	-16	True	NA	18	True	AATAAA	-14	NA	65411864	65743142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65733230_65733382_65742092
transcript_29947.nic	chr14	+	1356	2	ISM	ENSG00000033170.17	ENST00000549235.6	496	3	13	1302	13	-1302	5prime_fragment	FALSE	canonical	3	44	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTGCATTGATGC	23	True	NA	NA	False	NA	NA	NA	65411903	65456886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_65411994_65455620
transcript_29949.known	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	12.8874642460756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	-1	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_29951.known	chr14	+	5006	15	FSM	ENSG00000072415.10	ENST00000555925.5	5006	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	20.4789588383306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAATTTCTCTTGCTA	-13	True	NA	21	True	AATAAA	-33	NA	67241422	67335819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67241534_67269700_67269784_67279249_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_29958.known	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	23.9478600296561	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-13	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_29961.known	chr14	-	1085	8	FSM	ENSG00000100554.12	ENST00000555431.5	1085	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	172.830812634548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCTTGGCGCTGTTGTC	4	True	NA	NA	False	NA	NA	NA	67359787	67338250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67359657
transcript_29963.known	chr14	-	888	8	FSM	ENSG00000100554.12	ENST00000554236.5	888	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	173.830670598765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGATGTCTATTTATGG	4	True	NA	-11	True	NA	NA	NA	67359787	67338498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67338763_67340439_67340519_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_29966.known	chr14	+	4154	8	FSM	ENSG00000134001.15	ENST00000256383.11	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_5	134.54898205274	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGATACAGACTTTTC	-10	True	NA	16	True	AATAAA	-18	NA	67360327	67386516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67360457_67364766_67365009_67374467_67374548_67376438_67376591_67380658_67380766_67381592_67381691_67382446_67382591_67383314
transcript_29971.known	chr14	+	527	3	FSM	ENSG00000134001.15	ENST00000556724.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_2	114.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAATATTCTCAAATTAG	15	True	NA	NA	False	NA	NA	NA	67360352	67374648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67360457_67364766_67365009_67374467
transcript_29972.known	chr14	-	594	4	FSM	ENSG00000100564.9	ENST00000558001.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	37.3838943337309	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGATCCTGGCACAC	2	True	NA	NA	False	NA	NA	NA	67600282	67590126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67590173_67592634_67592719_67593742_67593948_67600023
transcript_29978.known	chr14	+	1911	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	70.7398222289227	576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	0	True	NA	10	True	AATAAA	-17	NA	67619919	67651708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
transcript_29985.known	chr14	-	2539	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	342.077679612232	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACACTGTTCATTA	-2	True	NA	58	True	AATAAA	-34	NA	67695764	67676799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_29986.known	chr14	-	1926	7	FSM	ENSG00000072042.13	ENST00000553384.5	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	208.871105921544	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAACAAACAAACAA	8	True	NA	NA	False	NA	NA	NA	67695754	67677363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692972_67693053_67695629
transcript_2999.known	chr1	-	867	6	FSM	ENSG00000066322.15	ENST00000470968.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	94.6648826122971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTACAGGGACCACGG	20	False	43368045	NA	False	NA	NA	NA	43368025	43363770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43364138_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_29990.known	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_4	76.8156234108661	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-15	True	NA	-13	True	AGTAAA	-19	NA	67674632	67647084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
transcript_29995.known	chr14	-	1064	6	FSM	ENSG00000072042.13	ENST00000428130.6	1064	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	442.585765699712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTACTACCTAGGAGAAT	-2	True	NA	NA	False	NA	NA	NA	67695733	67678033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_3.known	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00004_+_0_500
transcript_30.known	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00079_+_0_600
transcript_300.known	chr1	-	1171	4	FSM	ENSG00000162576.17	ENST00000474033.5	1171	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	19.3620476419435	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAGGTATGCTTCT	7533	False	NA	-11	True	AATAAA	-21	NA	1354264	1352688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192
transcript_30006.known	chr14	-	888	4	FSM	ENSG00000072042.13	ENST00000554731.1	888	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	429.016187210796	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATATGACCTGCACAG	-4	True	NA	NA	False	NA	NA	NA	67695766	67678072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67695629
transcript_30010.known	chr14	-	801	2	FSM	ENSG00000072042.13	ENST00000556692.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGGGTCTTGAGGT	NA	False	NA	NA	False	NA	NA	NA	67695793	67692415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_67693053_67695629
transcript_30013.known	chr14	+	922	7	FSM	ENSG00000182185.19	ENST00000390683.7	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	5.61990510002912	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTACAGTCTAATTGC	-5	True	NA	NA	False	AATAAA	-35	NA	67819811	67887326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020
transcript_30015.nic	chr14	+	911	4	ISM	ENSG00000182185.19	ENST00000390683.7	922	7	-45	51623	-12	597	5prime_fragment	FALSE	canonical	3	47	junction_1	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGAAACCATTTAGC	-13	True	NA	NA	False	AATAAA	-3	NA	67819766	67835703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079
transcript_30017.nic	chr14	+	1038	4	ISM	ENSG00000182185.19	ENST00000557045.5	528	6	291605	-624	-95253	0	3prime_fragment	FALSE	canonical	2	7	junction_3	19.7371617907833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCATTTTGTTCATT	6646	False	NA	3	True	NA	NA	NA	68291883	68497881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_68291981_68411423_68411528_68468171_68468251_68497123
transcript_30018.known	chr14	+	1673	11	FSM	ENSG00000182185.19	ENST00000487861.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.4932243254915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGTACCATATAGAAATA	-1	True	NA	NA	False	NA	NA	NA	67819778	68611565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68611005
transcript_30019.known	chr14	-	3017	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-3	True	NA	-12	True	AATAAA	-19	NA	68793067	68787661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_68790493_68792881
transcript_30020.known	chr14	-	3043	21	FSM	ENSG00000072110.16	ENST00000438964.6	3043	21	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	378.023342533236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAAGAAAAAAAAG	-3	True	NA	-118	True	NA	NA	NA	68979262	68874685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_30021.known	chr14	-	3779	21	FSM	ENSG00000072110.16	ENST00000193403.10	3779	21	0	0	0	0	multi-exon	TRUE	canonical	3	1103	junction_10	105.403273193957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACACTCCTATGACA	2	True	NA	-24	True	ATTAAA	-1	NA	68979440	68874142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_30025.known	chr14	-	5946	9	FSM	ENSG00000139990.18	ENST00000341516.10	5946	9	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_2	46.3261197921864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCTCTCCTTTATTTCT	15	True	NA	37	True	NA	NA	NA	69153119	69050880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
transcript_30026.known	chr14	-	2837	7	FSM	ENSG00000139990.18	ENST00000389997.10	2837	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	69.9589165153378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTACGTTGGTCAAT	19	True	NA	NA	False	AATAAA	-17	NA	69152983	69089203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69091157_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
transcript_30027.known	chr14	+	3404	11	FSM	ENSG00000081177.19	ENST00000409014.5	3404	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	68.186215615768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCACTGGATGTAAAT	15	True	NA	27	True	AATAAA	-16	NA	69191530	69242356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69210111_69210202_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_30028.nic	chr14	+	3354	10	FSM	ENSG00000081177.19	ENST00000685843.1	5009	10	-5	1660	-5	0	multi-exon	FALSE	canonical	3	100	junction_1	27.6409965695527	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	-23	True	NA	29	True	AATAAA	-18	NA	69191492	69242358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_30029.known	chr14	+	3243	10	FSM	ENSG00000081177.19	ENST00000492815.5	3243	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	58.3152352877588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCACTGGATGTAAATG	13	True	NA	28	True	AATAAA	-17	NA	69191528	69242357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234773_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_3003.nnic	chr1	-	958	3	NIC	ENSG00000066322.15	novel	1466	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	117.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	NA	False	NA	-5	True	ATTAAA	-18	NA	43368075	43363400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_43364138_43365563_43365624_43367914
transcript_30032.known	chr14	+	2688	10	FSM	ENSG00000081177.19	ENST00000409949.5	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	43.143458654718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAGAAAAAGTTCTTCC	-39	True	NA	NA	False	GGGGCT	-25	NA	69191765	69241517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69192040_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_30034.known	chr14	+	3252	9	FSM	ENSG00000081177.19	ENST00000409018.7	3252	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	54.3264150759094	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	-5	True	NA	29	True	AATAAA	-18	NA	69191510	69242358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69191592_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_30035.known	chr14	+	2496	9	FSM	ENSG00000081177.19	ENST00000409242.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	54.0069439979712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCTTGTCTAGTGC	1	True	NA	NA	False	NA	NA	NA	69191805	69241449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_30037.known	chr14	+	3701	8	FSM	ENSG00000029364.12	ENST00000628474.2	3701	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	63.9910708056768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTTTGGACAGTAG	-5	True	NA	9	True	AATAAA	-18	NA	69398691	69460551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69441831_69441973_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_30039.known	chr14	+	5399	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	27.5887456925626	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	-5	True	NA	26	True	ATTAAA	-23	NA	69398691	69462390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_30042.known	chr14	+	2065	7	FSM	ENSG00000029364.12	ENST00000556605.5	2065	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	50.6524102749974	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	-7	True	NA	24	True	ATTAAA	-21	NA	69398689	69462388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
transcript_30044.known	chr14	+	855	6	FSM	ENSG00000029364.12	ENST00000557046.1	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	55.1905789061865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAAGGTCCAGCCTTG	371	False	NA	NA	False	NA	NA	NA	69399369	69458593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69454811_69454898_69455731_69455867_69458362
transcript_30046.known	chr14	+	5192	6	FSM	ENSG00000029364.12	ENST00000031146.8	5192	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	55.4003610096541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	-5	True	NA	17	True	ATTAAA	-14	NA	69398691	69462381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_3005.known	chr1	-	1483	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	67.3740699833582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	3	True	NA	-14	True	AATAAA	-15	NA	43389808	43383916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_30056.known	chr14	-	791	4	FSM	ENSG00000100632.11	ENST00000557016.6	791	4	0	0	0	0	multi-exon	FALSE	canonical	3	2536	junction_1	175.523977469366	2833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCCTGAGTGCTTTT	8	True	NA	-12	True	AATAAA	-20	NA	69398299	69380127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69380641_69386962_69387084_69394824_69394913_69398230
transcript_30057.known	chr14	+	1763	3	FSM	ENSG00000029364.12	ENST00000554059.1	1763	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	65.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCACTATTAATGTAC	11	True	NA	NA	False	NA	NA	NA	69398707	69429457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69399466_69424093_69424203_69428561
transcript_30058.known	chr14	-	668	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	1264.5	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATATTTTCTCCCTGAG	36	False	NA	-19	True	AATAAA	-13	NA	69398271	69380134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69380641_69386962_69387084_69398230
transcript_30059.known	chr14	-	4182	2	FSM	ENSG00000267909.3	ENST00000599174.3	4182	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTGAAATGGCTGAT	-4	True	NA	-5	True	ATTAAA	-31	NA	69574871	69569798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69573651_69574541
transcript_30068.known	chr14	+	1638	8	FSM	ENSG00000100650.16	ENST00000394366.6	1638	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	570.540023457905	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATTGATAATAAAAT	NA	False	NA	11	True	NA	NA	NA	69767092	69771973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_3007.known	chr1	-	1968	7	FSM	ENSG00000159479.17	ENST00000372457.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	23.9263917509979	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-10	True	NA	-14	True	AATAAA	-15	NA	43389800	43383916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_30075.known	chr14	+	2443	7	FSM	ENSG00000100650.16	ENST00000556184.5	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	613.651819483619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTATTAAATGTCTTT	7	False	NA	-4	True	NA	NA	NA	69767171	69771642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69770541_69770994_69771106_69771193
transcript_30085.known	chr14	+	3044	6	FSM	ENSG00000100650.16	ENST00000554465.5	3044	6	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	217.727719870484	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	NA	False	NA	13	True	AATAAA	-14	NA	69767092	69772004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69770541_69770994_69771106_69771193
transcript_30086.known	chr14	+	2057	8	FSM	ENSG00000100650.16	ENST00000555547.5	2057	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	615.175103660141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTTGATAAGCCTTC	21	False	NA	8	True	NA	NA	NA	69767185	69771654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69769510_69770541_69770994_69771106_69771193
transcript_30087.known	chr14	-	801	1	FSM	ENSG00000242071.3	ENST00000477943.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	16	False	NA	NA	False	AAAAAG	-37	NA	69886140	69885339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_69885300_69886100
transcript_30088.nnic	chr14	-	711	3	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	9	junction_1	13	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTTATAACTCCTCCT	NA	False	NA	-3	True	AATAAA	-24	NA	70252975	70238303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr14_-_70238663_70239479_70239706_70252849
transcript_30089.nnic	chr14	-	655	3	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCCAACTAGCTTTATAA	NA	False	NA	-11	True	AATAAA	-16	NA	70252975	70238311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr14_-_70238663_70239527_70239706_70252849
transcript_30092.known	chr14	-	929	6	FSM	ENSG00000258644.6	ENST00000621525.4	929	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	1275.17568985611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-28	True	NA	-25	True	AATAAA	-28	NA	70417074	70326063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70375675_70375772_70388469_70388607_70416899
transcript_30095.known	chr14	-	479	5	FSM	ENSG00000258644.6	ENST00000617124.4	479	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1101.30635497122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTAAGACAACTTGAC	-3	True	NA	-48	True	AAGAAA	-13	NA	70416984	70326351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70375675_70375772_70388469_70388607_70416899
transcript_30101.nnic	chr14	-	2618	5	NNC	ENSG00000213463.5	novel	7057	4	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	68.7986191721898	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-50	True	NA	-1	True	AATAAA	-21	NA	70417096	70366498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_70367322_70371766_70373132_70375675_70375772_70388469_70388607_70416899
transcript_30103.known	chr14	-	1669	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2511	junction_3	101.299336402345	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGTGATAATTTGTG	-16	True	NA	-12	True	AATAAA	-17	NA	70359683	70325080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
transcript_30109.known	chr14	-	7057	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	26.1916017074176	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-44	True	NA	-1	True	AATAAA	-21	NA	70417090	70366498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
transcript_30116.known	chr14	-	627	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1198.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	28	False	70359728	-29	True	AATAAA	-24	NA	70359700	70326067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70326450_70329173_70329237_70359518
transcript_30120.known	chr14	-	902	3	FSM	ENSG00000213463.5	ENST00000554216.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	76	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACACATACGTATGCA	-15	True	NA	-73	True	AATACA	-1	NA	70417061	70372487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70373132_70375675_70375772_70416899
transcript_30125.known	chr14	+	1464	3	FSM	ENSG00000259033.2	ENST00000553791.2	1464	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGGTCCCCAAATCACT	10	False	NA	NA	False	AATAAA	-21	NA	70255642	70292328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70256190_70275295_70275361_70291476
transcript_30129.known	chr14	-	2351	8	FSM	ENSG00000133997.12	ENST00000256379.10	2351	8	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	23.5787867303106	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAGAATTCCTATATA	8	True	NA	NA	False	NA	NA	NA	70600655	70583220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_30130.known	chr14	-	1507	8	FSM	ENSG00000133997.12	ENST00000430055.6	1507	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	73.786232884362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATGAAGAAAAGGAAAAA	8	True	NA	NA	False	AATAAA	-19	NA	70600655	70584085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70593010_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_30133.known	chr14	-	931	7	FSM	ENSG00000133997.12	ENST00000440435.2	931	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.4415004549897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGCCCATAGTCCCAGCT	8	True	NA	NA	False	AATACA	-23	NA	70600655	70584524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70584944_70585755_70585784_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_30134.known	chr14	-	862	5	FSM	ENSG00000133997.12	ENST00000556495.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	70600664	70592510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_30135.known	chr14	-	1093	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	6.54896090146283	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGATCACCTGAGC	8	True	NA	NA	False	NA	NA	NA	70600655	70592577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
transcript_30137.known	chr14	-	975	9	FSM	ENSG00000133997.12	ENST00000554963.5	975	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.6273031470386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGATTGTTGTACTTTG	20	True	NA	-6	True	AATAAA	-16	NA	70600643	70581256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_70581489_70584816_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_30140.nnic	chr14	+	1129	3	NNC	ENSG00000259153.3	novel	1019	2	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAATACATTCCTAATC	-2	True	NA	14	True	AATAAA	-24	NA	70809964	70815396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_70810675_70814226_70814360_70815110
transcript_30141.known	chr14	+	963	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	49	7	49	-7	multi-exon	FALSE	canonical	3	47	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	24	True	NA	7	True	AATAAA	-17	NA	70809990	70815389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70810675_70815110
transcript_30144.known	chr14	+	1659	2	FSM	ENSG00000259153.3	ENST00000661317.1	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAGTATAATGATAA	1090	False	NA	NA	False	AAAACA	-43	NA	70809890	70815994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70810666_70815110
transcript_30147.known	chr14	+	368	2	ISM	ENSG00000259153.3	ENST00000554032.2	537	3	305	5	263	-5	3prime_fragment	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	238	False	NA	9	True	AATAAA	-19	NA	70810204	70815391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_70810292_70815110
transcript_30150.known	chr14	+	284	2	FSM	ENSG00000275630.1	ENST00000622856.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCGTCTGATGATAGTT	NA	False	NA	8	True	CATAAA	-23	NA	70822003	70823984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_70822123_70823819
transcript_30154.nic	chr14	+	2434	14	NIC	ENSG00000119599.17	novel	2374	14	NA	NA	-3	0	intron_retention	FALSE	canonical	2	37	junction_9	13.6689515576869	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	-27	True	NA	27	True	AATAAA	-12	NA	72926447	72959644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_30155.known	chr14	+	2474	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_9	13.3500880922564	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	-11	True	NA	86	True	NA	NA	NA	72926463	72959703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_30156.known	chr14	+	1872	14	FSM	ENSG00000119599.17	ENST00000509320.5	1872	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	26.4302140176305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACGAAAAGCTTCT	-24	True	NA	NA	False	AAAAAG	-24	NA	72926450	72959121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945887_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_30158.known	chr14	+	2374	14	FSM	ENSG00000119599.17	ENST00000555042.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.889447891486	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	12	True	NA	27	True	AATAAA	-12	NA	72926486	72959644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954463_72955522_72955697_72956385_72956501_72958611
transcript_30159.known	chr14	-	4380	12	FSM	ENSG00000165861.14	ENST00000556143.6	4380	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	10.720336740733	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGACTGTGCTGGCTCTT	-11	True	NA	-7	True	CATAAA	-15	NA	73027106	72969450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978045_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
transcript_30164.known	chr14	+	6813	19	FSM	ENSG00000119707.14	ENST00000261973.12	6813	19	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_9	112.33184964401	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTGTCTACTTT	-3	True	NA	NA	False	AATAAA	-38	NA	73058533	73123899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
transcript_30171.nic	chr14	+	1965	15	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-7	12990	-5	0	5prime_fragment	TRUE	canonical	3	240	junction_9	67.8477061107433	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAGAAAAACGA	-10	True	NA	37	True	AATAAA	-39	NA	73058526	73110909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830
transcript_30184.nic	chr14	+	1651	12	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-23	17640	-21	-4650	5prime_fragment	FALSE	canonical	3	240	junction_9	55.8899449848828	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAAGAAAGAAGAAGA	0	True	NA	61	True	AAGAAA	-29	NA	73058510	73106259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195
transcript_3019.known	chr1	-	1186	7	FSM	ENSG00000159479.17	ENST00000372455.4	1186	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	89.6314986796247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCTCCCCACCACCC	6	True	NA	-19	True	AATAAA	-15	NA	43389784	43384725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387630_43388309_43388490_43389758
transcript_30190.nic	chr14	+	1491	11	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-37	17928	-35	4792	5prime_fragment	FALSE	canonical	3	240	junction_9	56.8031689256858	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAGAAAAAGACAAA	NA	False	NA	-59	True	NA	NA	NA	73058496	73105971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858
transcript_30197.nic	chr14	+	1324	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-244	20682	-242	2038	5prime_fragment	FALSE	canonical	3	240	junction_9	54.590959320259	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAAAGACAGGAAA	NA	False	NA	-5	True	NA	NA	NA	73058289	73103217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_30198.nic	chr14	+	1215	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-23	20570	-21	2150	5prime_fragment	FALSE	canonical	3	240	junction_9	54.590959320259	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAGAAAGAACGGGA	0	True	NA	39	True	NA	NA	NA	73058510	73103329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_302.known	chr1	-	875	4	FSM	ENSG00000175756.14	ENST00000378853.3	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_3	1426.0927973546	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCCTGCGGGTCTGG	13	True	NA	-30	True	AATAAA	-15	NA	1375173	1373736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1374996
transcript_3020.known	chr1	-	2173	6	FSM	ENSG00000178922.18	ENST00000372427.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	7.69415362466854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGTCATATGTCTCTG	47	True	NA	-9	True	ATTAAA	-13	NA	43453909	43451159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204
transcript_30203.known	chr14	+	2470	9	FSM	ENSG00000119707.14	ENST00000525321.5	2470	9	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_6	31.6936014835802	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	10	True	NA	NA	False	AATAAA	-20	NA	73058546	73101179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666
transcript_30209.nic	chr14	+	919	7	ISM	ENSG00000119707.14	ENST00000525321.5	2470	9	-16	4079	-1	0	5prime_fragment	FALSE	canonical	3	322	junction_6	32.2511843021135	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTTCTGACAACAAC	-6	True	NA	31	True	NA	NA	NA	73058530	73097100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914
transcript_3021.nic	chr1	-	1115	6	ISM	ENSG00000178922.18	ENST00000372434.5	1025	9	994	4	-612	0	3prime_fragment	FALSE	canonical	3	26	junction_1	18.3259379023285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	1776	False	NA	-7	True	ATTAAA	-15	NA	43452831	43451157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204
transcript_30210.known	chr14	+	1567	11	FSM	ENSG00000119707.14	ENST00000526754.5	1567	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	146.19675098989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	12	True	NA	NA	False	AATAAA	-20	NA	73058548	73101179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300_73100363_73100713
transcript_30211.known	chr14	+	6848	17	FSM	ENSG00000119707.14	ENST00000532683.5	6848	17	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_6	106.003371850852	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAATTGCACTTAA	5	True	NA	15	True	ATTAAA	-16	NA	73058541	73120129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111803_73112151_73112251_73114285_73114334_73119712
transcript_30216.known	chr14	+	2776	12	FSM	ENSG00000080815.19	ENST00000357710.8	2776	12	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	44.3321423233212	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	-43	True	NA	14	True	ATTAAA	-25	NA	73136446	73220401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73136584_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_30217.known	chr14	+	6018	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	64.0374373974299	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	17	True	NA	7	True	AATAAA	-16	NA	73136506	73223691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_30225.known	chr14	+	1249	5	FSM	ENSG00000080815.19	ENST00000394157.7	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	90.9958790275692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACAATCTAAGTGGGTT	-43	True	NA	NA	False	AATAAA	-14	NA	73136446	73174204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565
transcript_30226.known	chr14	-	3050	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCAAGTTTCTATTT	16	True	NA	NA	False	AATGAA	-18	NA	73245979	73242650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73245245_73245523
transcript_30230.known	chr14	-	3604	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	50.7772915123811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	7	True	NA	-27	True	AATAAA	-15	NA	73458546	73275215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_30232.nic	chr14	-	3568	12	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_10	61.0979433179706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	8873	False	NA	-27	True	AATAAA	-15	NA	73458595	73275215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_30233.known	chr14	-	3547	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_7	64.5832155868473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	31	True	NA	-27	True	AATAAA	-15	NA	73458522	73275215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_30234.known	chr14	-	3037	12	FSM	ENSG00000133961.21	ENST00000555394.5	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	62.7570416845133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAATTCTAATGTCAT	-27	True	NA	-2	True	AATAAA	-33	NA	73458580	73275672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_30238.nic	chr14	-	3535	11	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_7	74.5428735695103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	8873	False	NA	-27	True	AATAAA	-15	NA	73458595	73275215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_30241.nic	chr14	-	3424	11	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	73.0150669382697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	8873	False	NA	-27	True	AATAAA	-15	NA	73458595	73275215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_30242.known	chr14	-	3607	11	FSM	ENSG00000133961.21	ENST00000554546.5	3607	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	76.1167524267818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	8851	False	NA	82	True	NA	NA	NA	73458617	73275106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_30243.nic	chr14	-	3215	11	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	92.7685291464729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	8873	False	NA	-27	True	AATAAA	-15	NA	73458595	73275215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_73277294_73282358_73282506_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_30249.nic	chr14	-	1907	9	ISM	ENSG00000133961.21	ENST00000555394.5	3037	12	-15	10520	-15	0	5prime_fragment	FALSE	canonical	3	191	junction_7	51.0745472324523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	8873	False	NA	NA	False	NA	NA	NA	73458595	73286192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_3025.known	chr1	+	2168	8	FSM	ENSG00000142949.17	ENST00000436724.5	2168	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	386.311125537805	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTCTCCACCCAG	23	True	NA	NA	False	NA	NA	NA	43530902	43580078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43575909_43575928_43578809
transcript_30250.nic	chr14	-	1874	8	ISM	ENSG00000133961.21	ENST00000557597.5	3547	12	-73	10977	-15	0	5prime_fragment	FALSE	canonical	3	109	junction_3	72.5838009700877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	8873	False	NA	NA	False	NA	NA	NA	73458595	73286192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_30251.known	chr14	-	1740	7	FSM	ENSG00000133961.21	ENST00000554315.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	88.5012554838756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	7	True	NA	NA	False	NA	NA	NA	73458546	73286192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_30254.known	chr14	-	847	5	FSM	ENSG00000133961.21	ENST00000557774.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	52.3975190252363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGGTATAAATTATTAG	-24	True	NA	NA	False	AATAAA	-41	NA	73458577	73322800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_30255.nic	chr14	+	1153	3	ISM	ENSG00000119673.16	ENST00000538782.2	1578	4	1575	-2	-18	0	3prime_fragment	FALSE	canonical	3	32	junction_1	16.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	4	False	NA	14	True	ATTAAA	-17	NA	73569194	73575655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_73569397_73573387_73573591_73574907
transcript_30256.known	chr14	-	629	2	FSM	ENSG00000258603.5	ENST00000555011.3	1303	2	658	16	-56	-16	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGACAGTCTCAC	664	False	NA	NA	False	ATTAAA	-8	NA	73633778	73616699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73617211_73633660
transcript_30257.known	chr14	+	632	9	FSM	ENSG00000119661.15	ENST00000554871.5	632	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	29.372606285449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACGCTTTCCACTGTGT	29	True	NA	-64	True	ATTAAA	-25	NA	73645026	73695942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_30260.known	chr14	+	8417	8	FSM	ENSG00000119661.15	ENST00000553645.7	8417	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	11.0675108275695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-12	True	NA	8	True	AATAAA	-22	NA	73644985	73703732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_30263.known	chr14	+	2312	7	FSM	ENSG00000119661.15	ENST00000311089.7	2312	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	28.7426319060884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGAAAACTTGGTC	11	True	NA	NA	False	AATAGA	-34	NA	73645008	73697760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73645043_73654846_73654886_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_30265.known	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-3	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_73711800_73714400
transcript_3027.known	chr1	+	4486	22	FSM	ENSG00000066135.13	ENST00000372396.4	4486	22	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	42.0984161696248	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	-12	True	NA	17	True	AATAAA	-18	NA	43650148	43705518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43650253_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_30280.nic	chr14	+	2410	12	NIC	ENSG00000119725.21	novel	2623	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	52.0322531887754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	306	False	NA	13	True	AATAAA	-17	NA	73886727	73932278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_73886916_73892026_73892108_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_30281.known	chr14	+	2623	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_10	28.7813070648926	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATAGTTTTTTTAAAA	11	True	NA	NA	False	AATAAA	-25	NA	73886858	73932521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_30282.known	chr14	+	1961	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	52.0590891231356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	49	False	NA	NA	False	NA	NA	NA	73886807	73931840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_30283.nnic	chr14	+	2495	12	NIC	ENSG00000119725.21	novel	2293	11	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	68.8764614519994	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	273	False	NA	13	True	AATAAA	-17	NA	73886694	73932278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_73886916_73888272_73888365_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_30287.known	chr14	+	2109	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	6.68042657122685	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTTTGGTGGCAGA	-11	True	NA	NA	False	NA	NA	NA	73950301	73963670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_30291.known	chr14	-	5462	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_3	25.2805743213347	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTGTATTTTA	21	False	74084474	NA	False	AATGAA	-27	NA	74084453	74056846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_30292.known	chr14	-	1869	12	FSM	ENSG00000119711.13	ENST00000350259.8	1869	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.1045965167805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAAGTAGTGCTTAAAC	-17	True	NA	-37	True	NA	NA	NA	74084447	74060394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072241_74072365_74072536_74072612_74074954_74075018_74084346
transcript_30294.known	chr14	-	2221	12	FSM	ENSG00000119711.13	ENST00000554501.5	2221	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	78.4394275964128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGATTGCTTGAGCCCA	-19	True	NA	-67	True	NA	NA	NA	74084449	74060246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071661_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_30299.known	chr14	+	2293	11	FSM	ENSG00000119725.21	ENST00000324593.10	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	36.3236837338946	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	46	False	NA	13	True	AATAAA	-17	NA	73886804	73932278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_303.known	chr1	-	1047	4	FSM	ENSG00000175756.14	ENST00000338338.10	753	4	-288	-6	-288	0	multi-exon	FALSE	canonical	3	1810	junction_3	845.742408906058	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	20	True	NA	-23	True	AATAAA	-22	NA	1375495	1373729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375153
transcript_30310.nnic	chr14	-	1864	11	NIC	ENSG00000119711.13	novel	5462	12	NA	NA	17	83	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	80.2543456767296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGGAAAAAAAATTTT	-1	True	NA	16	True	AGTAAA	-5	NA	74084475	74060163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_30311.nnic	chr14	-	1987	11	NIC	ENSG00000119711.13	novel	5462	12	NA	NA	17	83	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	76.77603792851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGGAAAAAAAATTTT	-1	True	NA	16	True	AGTAAA	-5	NA	74084475	74060163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74060747_74064821_74064921_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_30316.known	chr14	+	2765	10	FSM	ENSG00000140043.12	ENST00000555661.6	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	21.1945718650604	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCATCTTATACTCTGC	-4	True	NA	NA	False	AGTAAA	-15	NA	73851830	73885726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_3032.known	chr1	-	3389	4	FSM	ENSG00000236200.7	ENST00000659644.2	3391	4	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_3	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGGCGTGAACCTGGG	-2	True	NA	NA	False	NA	NA	NA	43707369	43699839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43702729_43703563_43703648_43704352_43704458_43707058
transcript_30321.known	chr14	+	2543	10	FSM	ENSG00000140043.12	ENST00000555228.5	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	38.5672412646462	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGAATGTTTTGGCTT	9	True	NA	6	True	AGTAAA	-14	NA	73851843	73885456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_30326.known	chr14	+	2559	10	FSM	ENSG00000140043.12	ENST00000267568.8	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	43.9564880251616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	3	True	NA	9	True	AGTAAA	-17	NA	73851946	73885459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73852121_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_30333.nic	chr14	+	1418	9	NIC	ENSG00000140043.12	novel	2765	10	NA	NA	-10	0	combination_of_known_splicesites	TRUE	canonical	3	17	junction_5	48.6434733546033	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGAACTGGAAATGTT	-14	True	NA	17	True	AATAAA	-31	NA	73851820	73884579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_30335.nic	chr14	+	2298	9	NIC	ENSG00000140043.12	novel	2765	10	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	48.6434733546033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	-14	True	NA	9	True	AGTAAA	-17	NA	73851820	73885459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_3034.known	chr1	+	3883	20	FSM	ENSG00000117408.11	ENST00000372343.8	3883	20	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_5	15.9844106879657	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGCATACATTTATTTA	1	True	NA	13	True	ATTAAA	-17	NA	43946949	43968022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43961014_43961165_43961263_43964268_43964322_43966574_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
transcript_30354.known	chr14	+	689	6	FSM	ENSG00000119636.16	ENST00000464394.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	1.78885438199983	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCTCTCATTTAGACTT	-2	True	NA	NA	False	NA	NA	NA	74019352	74048074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74019535_74029183_74029250_74034027_74034172_74040564_74040646_74046059_74046131_74047929
transcript_30355.known	chr14	+	649	5	FSM	ENSG00000119723.17	ENST00000554920.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	38.4341970125564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTCTTCTTTGCT	-5	True	NA	11	True	AATAAA	-18	NA	73950307	73963112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73962969
transcript_30356.nnic	chr14	+	1235	4	NNC	ENSG00000140043.12	novel	2765	10	NA	NA	-10	1838	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	69.2868433879526	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGAGTTCTGTTTTATC	-14	True	NA	6	True	AATAAA	-23	NA	73851820	73863564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_73851944_73858815_73858900_73860538_73860658_73862655
transcript_30362.known	chr14	-	452	4	FSM	ENSG00000187097.13	ENST00000557681.1	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	14.522013940528	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTATTTGTTGATAAC	14	True	NA	NA	False	CATAAA	-24	NA	74019271	74008929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74009193_74011090_74011151_74015823_74015931_74019249
transcript_30366.known	chr14	+	1798	6	FSM	ENSG00000205659.12	ENST00000555028.7	2874	6	-3	1079	-3	-24	multi-exon	FALSE	canonical	3	142	junction_1	26.0076911701135	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-10	True	NA	NA	False	NA	NA	NA	74084952	74200414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921
transcript_30375.known	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_17	92.5881795244637	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	1	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
transcript_30379.nic	chr14	-	2253	18	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	107.45717743687	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-22	True	NA	-31	True	ATTAAA	-3	NA	74302998	74285995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
transcript_30380.known	chr14	-	1842	18	FSM	ENSG00000119688.21	ENST00000553486.5	1842	18	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_16	87.8602224281336	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACATGGGTCCTGTGCAG	122	False	NA	NA	False	NA	NA	NA	74302945	74286344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_3039.known	chr1	+	987	8	FSM	ENSG00000117410.14	ENST00000472174.7	987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_7	62.9330710244735	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	21	True	NA	28	True	AATAAA	-21	NA	43974959	43978295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_30395.nnic	chr14	-	2117	17	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	101.938400517175	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-14	True	NA	-31	True	ATTAAA	-3	NA	74302990	74285995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74302874
transcript_30397.nic	chr14	-	2113	17	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	129.304132160384	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-22	True	NA	-31	True	ATTAAA	-3	NA	74302998	74285995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74299547_74299676_74302874
transcript_304.nic	chr1	-	903	4	NIC	ENSG00000175756.14	novel	753	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_2	1475.79967023532	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCCTGCGGGTCTGG	-27	True	NA	-30	True	AATAAA	-15	NA	1375213	1373736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1373903_1373999_1374591_1374704_1374791_1375153
transcript_30410.known	chr14	-	2336	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_15	90.2205630662988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTAAACATTAAAAAGA	-2	True	NA	25	True	NA	NA	NA	74302937	74286013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_30415.nnic	chr14	-	2022	16	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	2	0	combination_of_known_splicesites	TRUE	canonical	3	34	junction_15	126.077225011763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-14	True	NA	-31	True	ATTAAA	-3	NA	74302990	74285995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74302874
transcript_3043.known	chr1	+	1685	7	FSM	ENSG00000117410.14	ENST00000532642.5	1685	7	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_2	45.7566024379725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCACCTGTGTCCCCC	5	True	NA	-54	True	NA	NA	NA	43974943	43978213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025
transcript_30458.nnic	chr14	-	907	4	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.0678160675491	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTGATTTTTTTGG	NA	False	NA	-1	True	NA	NA	NA	74349988	74325343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_74325763_74326060_74326221_74327570_74327674_74349763
transcript_30460.nnic	chr14	-	773	4	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.0678160675491	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTACTTCTAGTTTT	NA	False	NA	-39	True	CATAAA	-21	NA	74349988	74325477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_74325763_74326060_74326221_74327570_74327674_74349763
transcript_30466.nnic	chr14	-	637	3	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	29.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTACTTCTAGTTTT	NA	False	NA	-39	True	CATAAA	-21	NA	74349955	74325477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_74325763_74326060_74326221_74349763
transcript_30468.known	chr14	+	3408	2	FSM	ENSG00000133980.5	ENST00000256362.5	3408	2	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_1	0	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCTGGTATTT	0	True	NA	37	True	AATAAA	-18	NA	74348470	74360008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74348653_74356782
transcript_3047.known	chr1	+	944	7	FSM	ENSG00000117410.14	ENST00000236067.8	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	559.309519755286	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCAGCTTCTGTT	9	True	NA	22	True	AATAAA	-15	NA	43974947	43978289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975108_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_30471.known	chr14	-	431	1	FSM	ENSG00000270000.1	ENST00000602790.1	431	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCTGAGATTTTAAATA	7866	False	NA	NA	False	AATAAA	-20	NA	74472360	74471929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74471900_74472400
transcript_30476.known	chr14	+	2581	4	FSM	ENSG00000165898.14	ENST00000556816.6	2581	4	0	0	0	0	multi-exon	FALSE	canonical	1	327	junction_3	262.024595961694	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	74493764	74497106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494274_74494391_74494825
transcript_30479.known	chr14	+	925	3	FSM	ENSG00000165898.14	ENST00000555139.1	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	57	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCACCAGTTGTACCAA	12	True	NA	-31	True	NA	NA	NA	74493771	74495022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494274
transcript_30480.known	chr14	+	489	3	FSM	ENSG00000165898.14	ENST00000554924.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	408.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGCCACTATTATTTT	5	True	NA	77	True	NA	NA	NA	74493764	74495130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494825
transcript_30481.known	chr14	-	583	4	FSM	ENSG00000119655.11	ENST00000554482.1	583	4	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	1138.84239471491	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGCTGTGGTCTTCT	5522	False	NA	-10	True	AATAAA	-27	NA	74493242	74479941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74480289_74480701_74480780_74486328_74486437_74493192
transcript_30482.known	chr14	-	729	5	FSM	ENSG00000119655.11	ENST00000553490.5	729	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1112.52977488245	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAGGTGGTTTCATT	-2	True	NA	-69	True	NA	NA	NA	74493339	74480081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74480289_74480685_74480780_74484414_74484588_74486328_74486437_74493192
transcript_30483.known	chr14	+	851	4	FSM	ENSG00000165898.14	ENST00000298818.12	851	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	414.627811684434	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTTATTGTGTTGTGGA	-4	True	NA	15	True	TATAAA	-18	NA	74493755	74495366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74493846_74494049_74494153_74494274_74494405_74494838
transcript_30484.known	chr14	-	5417	20	FSM	ENSG00000119682.18	ENST00000356357.9	5417	20	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_17	7.49182379816255	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGAGTGAGTGGCTGCT	12	True	NA	-8	True	AATAAA	-13	NA	74713080	74661255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_30485.known	chr14	-	2196	13	FSM	ENSG00000119682.18	ENST00000469797.5	2196	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	7.46473189218623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTAAAATATAAGCTAA	25	False	NA	NA	False	NA	NA	NA	74713067	74670641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_30488.nnic	chr14	+	1676	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-7	1410	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	62.7076550350912	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	NA	False	NA	29	True	AATAAA	-27	NA	74713136	74736714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735551_74736316
transcript_30490.nnic	chr14	+	1673	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-7	1410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.7076550350912	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	NA	False	NA	29	True	AATAAA	-27	NA	74713136	74736714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735606_74736374
transcript_30491.nnic	chr14	+	1754	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-7	1491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.7076550350912	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAGGTGCTTAATAAGAG	NA	False	NA	110	True	AATAAA	-16	NA	74713136	74736795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735606_74736374
transcript_30493.nnic	chr14	+	1793	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-7	1410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	62.7076550350912	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	NA	False	NA	29	True	AATAAA	-27	NA	74713136	74736714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735671_74736319
transcript_3050.known	chr1	+	2466	6	FSM	ENSG00000132768.14	ENST00000255108.8	2466	6	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	16.6973051717934	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	10	True	NA	23	True	AATAAA	-15	NA	43970009	43973369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_30503.nnic	chr14	+	1726	9	NNC	ENSG00000119616.11	novel	794	8	NA	NA	2	1410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	67.3901884549969	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	-25	True	NA	29	True	AATAAA	-27	NA	74713145	74736714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735551_74736316
transcript_30504.nnic	chr14	+	1723	9	NNC	ENSG00000119616.11	novel	794	8	NA	NA	2	1410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	67.3901884549969	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	-25	True	NA	29	True	AATAAA	-27	NA	74713145	74736714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735606_74736374
transcript_30506.nnic	chr14	+	1843	9	NNC	ENSG00000119616.11	novel	794	8	NA	NA	2	1410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.3901884549969	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	-25	True	NA	29	True	AATAAA	-27	NA	74713145	74736714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735671_74736319
transcript_30512.known	chr14	+	4341	8	FSM	ENSG00000119616.11	ENST00000341162.8	4341	8	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	31.4636168244128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAATTCTATTTTTTTGG	-27	True	NA	18	True	AATAAA	-20	NA	74713143	74738620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881
transcript_30514.nic	chr14	+	1373	2	ISM	ENSG00000119616.11	ENST00000554590.5	574	6	-7	18024	-7	-8550	5prime_fragment	FALSE	canonical	3	99	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTTTAGATTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	74713136	74714793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_74713201_74713484
transcript_30515.nic	chr14	+	1423	2	ISM	ENSG00000119616.11	ENST00000553673.1	547	5	-58	8550	2	-8550	5prime_fragment	FALSE	canonical	3	61	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTTTAGATTTTTGAG	-25	True	NA	NA	False	NA	NA	NA	74713145	74714793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_74713260_74713484
transcript_30516.known	chr14	+	8195	21	FSM	ENSG00000119596.18	ENST00000325680.12	8195	21	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	41.8775297743313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTATTTTCATTGCTTA	-47	True	NA	NA	False	ATTAAA	-27	NA	74763315	74837318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74797579_74799698_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
transcript_30517.known	chr14	+	4899	20	FSM	ENSG00000119596.18	ENST00000552421.5	4899	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	65.16214593733	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCCTTTTCTCTTGTTT	3	True	NA	37	True	AATAAA	-42	NA	74763365	74836190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
transcript_30518.known	chr14	+	2813	15	FSM	ENSG00000119689.15	ENST00000334220.9	2813	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	3.99297853124962	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	-10	True	NA	8	True	ATTAAA	-18	NA	74881915	74903743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288_74900373_74901065_74901234_74902195
transcript_30521.nic	chr14	+	1090	13	ISM	ENSG00000119689.15	ENST00000334220.9	2813	15	-23	3401	2	-848	5prime_fragment	FALSE	canonical	3	9	junction_9	4.19242040936842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGGACCATCACTGAACT	0	True	NA	NA	False	NA	NA	NA	74881892	74900342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288
transcript_30523.nic	chr14	+	843	2	ISM	ENSG00000119689.15	ENST00000556190.5	565	3	-32	2715	2	-2715	5prime_fragment	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTATGGCTAGCAGA	0	True	NA	NA	False	NA	NA	NA	74881892	74883309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_74882017_74882590
transcript_30524.nic	chr14	-	792	2	ISM	ENSG00000198208.12	ENST00000553894.6	1626	7	-11	10891	-6	-265	5prime_fragment	FALSE	canonical	3	22	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAGAAAACAGAATC	24	False	NA	NA	False	NA	NA	NA	74923266	74921780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_74922486_74923179
transcript_30527.known	chr14	+	4304	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_6	21.2900283260133	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	-25	True	NA	NA	False	AATAAA	-16	NA	75002920	75012366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
transcript_30530.known	chr14	-	7820	13	FSM	ENSG00000119684.16	ENST00000355774.7	7820	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	16.1681700331924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCCTTCCATCCCTCT	-12	True	NA	-11	True	AATAAA	-15	NA	75051467	75013774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75033418_75033491_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_30531.known	chr14	-	7819	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	18.252589536649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCATCCCTCTCTTCAT	NA	False	NA	-5	True	AATAAA	-21	NA	75051532	75013768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_30534.known	chr14	-	616	2	FSM	ENSG00000119684.16	ENST00000553263.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGACTGGAGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	75051504	75049168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75049719_75051438
transcript_30537.known	chr14	-	1161	6	FSM	ENSG00000170348.9	ENST00000555873.1	1161	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1007.88939869412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGATTTTTGTGTGAC	18	True	NA	NA	False	NA	NA	NA	75176597	75134499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75135007_75135759_75135887_75139073_75139172_75147663_75147738_75152031_75152144_75176354
transcript_30538.known	chr14	-	4109	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	0	0	0	multi-exon	FALSE	canonical	3	1826	junction_2	132.52735566667	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTGTACTGTTACTC	3	True	NA	-32	True	AATAAA	-16	NA	75176612	75131468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
transcript_3054.known	chr1	+	2414	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	112.838645862134	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	10	True	NA	23	True	AATAAA	-15	NA	43970009	43973369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_30540.known	chr14	-	650	4	FSM	ENSG00000119640.9	ENST00000357971.7	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	136.355743879343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	9	True	NA	-37	True	AATAAA	-16	NA	75064015	75053242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75053660_75061683_75061763_75063469_75063562_75063953
transcript_30541.known	chr14	-	3357	4	FSM	ENSG00000119638.14	ENST00000555405.5	3357	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	17.3781471969828	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTGTGCTTCAGTAA	NA	False	NA	-21	True	AATAAA	-16	NA	75091685	75082120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269
transcript_30545.known	chr14	+	3923	3	FSM	ENSG00000119703.15	ENST00000524913.3	3923	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTTCCCTTTAATCT	-16	True	NA	NA	False	AATAAA	-16	NA	75069640	75079988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75069750_75070554_75071912_75077531
transcript_30546.known	chr14	-	580	3	FSM	ENSG00000119640.9	ENST00000238618.8	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	4	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	0	True	NA	-37	True	AATAAA	-16	NA	75064024	75053242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75053660_75063469_75063562_75063953
transcript_30547.known	chr14	-	565	3	FSM	ENSG00000119640.9	ENST00000555694.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-3	True	NA	-37	True	AATAAA	-16	NA	75064027	75053242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75053660_75063469_75063562_75063971
transcript_30548.known	chr14	+	2104	4	FSM	ENSG00000170345.10	ENST00000303562.9	2104	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	5.35412613473634	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTTGTGCTCTTTTCA	0	True	NA	13	True	AATAAA	-21	NA	75278827	75282230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75279124_75279876_75280129_75280559_75280668_75280782
transcript_30555.known	chr14	+	1595	10	FSM	ENSG00000119685.20	ENST00000286650.9	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	49.7142451701673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32	True	NA	NA	False	NA	NA	NA	75661277	75709828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75709178
transcript_30559.nic	chr14	+	1463	2	ISM	ENSG00000119685.20	ENST00000556685.1	689	3	-14	5432	-5	934	5prime_fragment	FALSE	canonical	3	47	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGATAATGATAAATATA	-27	True	NA	NA	False	NA	NA	NA	75661218	75664098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_75661638_75663054
transcript_30560.known	chr14	+	4716	32	FSM	ENSG00000119685.20	ENST00000298832.14	4716	32	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	17.364549387826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	0	True	NA	4	True	AATAAA	-16	NA	75661245	75955079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_30561.known	chr14	+	3629	10	FSM	ENSG00000119686.10	ENST00000238667.9	3629	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	10.2632028788938	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	4	True	NA	6	True	AATAAA	-14	NA	75578619	75648167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75579642_75622078_75622221_75624611_75624753_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
transcript_30567.known	chr14	-	2320	5	FSM	ENSG00000133935.7	ENST00000256319.7	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_2	76.983764522138	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGGTCAGAAAAGG	-27	True	NA	NA	False	NA	NA	NA	75660876	75649790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
transcript_30572.known	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	151.302085205903	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	-17	True	NA	17	True	AATAAA	-17	NA	75985752	76083741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_30575.known	chr14	+	816	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	41.1187305251512	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	-7	True	NA	18	True	AATAAA	-18	NA	75985762	76083742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_30578.nic	chr14	+	998	8	ISM	ENSG00000119650.13	ENST00000314067.11	816	9	-14	0	-4	0	intron_retention	FALSE	canonical	3	320	junction_4	42.9641521194931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	-21	True	NA	18	True	AATAAA	-18	NA	75985748	76083742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226
transcript_30579.nic	chr14	+	1079	8	ISM	ENSG00000119650.13	ENST00000555305.5	1765	9	-31	843	-4	0	5prime_fragment	FALSE	canonical	3	320	junction_4	41.1889622622967	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	-21	True	NA	18	True	AATAAA	-18	NA	75985748	76083742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082693_76083226_76083290_76083457
transcript_30580.known	chr14	+	816	8	FSM	ENSG00000119650.13	ENST00000238628.10	816	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	181.445331059428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTTCTTTCCAGTCTC	12	True	NA	22	True	AATAAA	-22	NA	75985781	76083746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76076596_76076692_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_30588.known	chr14	+	848	4	FSM	ENSG00000119650.13	ENST00000556742.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	32.2214559295855	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	14	True	NA	7	True	AATAAA	-15	NA	75985783	76059271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641
transcript_30595.nnic	chr14	+	3249	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-13	-2477	intron_retention	FALSE	canonical	3	13	junction_9	54.9080038690981	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGTATTCCTGT	-28	True	NA	10	True	ATTAAA	-14	NA	76151902	76199530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76197668
transcript_30596.nnic	chr14	+	1520	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-13	-2475	intron_retention	FALSE	canonical	2	6	junction_9	57.0219797344805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGTATTCCTGTTT	-28	True	NA	12	True	ATTAAA	-16	NA	76151902	76199532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199399
transcript_30597.nnic	chr14	+	1871	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-13	-1644	intron_retention	FALSE	canonical	3	19	junction_9	53.1015798049152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTAGGGTAGTGCTT	-28	True	NA	6	True	AATAAA	-14	NA	76151902	76200363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
transcript_30598.known	chr14	+	14021	10	FSM	ENSG00000089916.18	ENST00000261530.12	14021	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	36.3440351211707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTCCTCTGCCAT	-9	True	NA	-13	True	NA	NA	NA	76151921	76214343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76201690
transcript_30602.nic	chr14	+	1844	9	ISM	ENSG00000089916.18	ENST00000261530.12	14021	10	-19	17914	-13	-156	5prime_fragment	FALSE	canonical	3	160	junction_1	16.4235920248891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCAGTTTTTTTTTTTT	-28	True	NA	NA	False	ATTAAA	-21	NA	76151902	76196429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877
transcript_30606.nic	chr14	+	1307	5	ISM	ENSG00000089916.18	ENST00000554125.5	6248	6	-31	6173	-13	-186	5prime_fragment	FALSE	canonical	3	160	junction_1	20.4496332485451	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTCATTACAGTGTCTA	-28	True	NA	NA	False	AATAAA	-45	NA	76151902	76173849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_30607.nic	chr14	+	1493	5	ISM	ENSG00000089916.18	ENST00000554125.5	6248	6	-31	5987	-13	0	5prime_fragment	FALSE	canonical	3	160	junction_1	20.4496332485451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	-28	True	NA	NA	False	NA	NA	NA	76151902	76174035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_30609.known	chr14	+	1458	5	FSM	ENSG00000089916.18	ENST00000557263.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.9348388796892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	-9	True	NA	NA	False	NA	NA	NA	76151921	76174035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_76151976_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_30612.known	chr14	-	5287	10	FSM	ENSG00000013523.11	ENST00000251089.8	5287	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	15.7511512414839	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAGAATTTTCAGAT	-26	True	NA	NA	False	ATTAAA	-18	NA	76812882	76786008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76806415_76806850_76807432_76807503_76807921_76808149_76809058_76809644_76812763
transcript_30614.known	chr14	-	1684	2	FSM	ENSG00000258301.3	ENST00000556072.2	1684	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGCTGGTCTCCAC	NA	False	NA	1	True	AATAAA	-18	NA	76786724	76781732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_76782777_76786084
transcript_30615.known	chr14	-	980	2	FSM	ENSG00000258819.2	ENST00000658895.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTAATCTGTTATG	NA	False	NA	NA	False	AATAAA	-28	NA	77076392	77073906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77074599_77076104
transcript_30616.nnic	chr14	+	1830	4	NNC	ENSG00000165548.11	novel	457	4	NA	NA	-58	2004	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.29983164553722	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTAGAAGCAGTAAGGA	-8	True	NA	NA	False	AAAAAG	-16	NA	77181739	77215634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_77181898_77196070_77196231_77213445_77213509_77214185
transcript_30618.known	chr14	+	4325	4	FSM	ENSG00000198894.8	ENST00000361786.7	4325	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	7.58653778449403	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTTTTGCTTTATA	-27	True	NA	10	True	AATAAA	-21	NA	77098257	77117287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113424
transcript_30622.known	chr14	-	3408	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	2	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATGATTGTATGGGC	-3	True	NA	-20	True	AATAAA	-21	NA	77141791	77131269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77133949_77139212_77139753_77141602
transcript_30623.known	chr14	+	1186	9	FSM	ENSG00000100577.19	ENST00000216465.10	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	19.3002590656188	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGTCTAAGACTGA	-6	True	NA	22	True	ATTAAA	-19	NA	77321035	77331597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_30624.known	chr14	+	867	8	FSM	ENSG00000100577.19	ENST00000349555.7	867	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	53.0832999604761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTGGGCAGGAATAC	590	False	NA	-69	True	NA	NA	NA	77321024	77331393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_30625.known	chr14	-	7761	6	FSM	ENSG00000100580.8	ENST00000216468.8	7761	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAACATCTGAGTTAT	-11	True	NA	-14	True	AATAAA	-16	NA	77377094	77335028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77341989_77343177_77343484_77343696_77343824_77346348_77346479_77351672_77351752_77376935
transcript_30626.known	chr14	-	2761	21	FSM	ENSG00000151445.16	ENST00000343765.6	2761	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	28.7288617943698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	21	True	NA	-15	True	AATAAA	-24	NA	77457561	77426674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094_77457366_77457494
transcript_30628.known	chr14	-	2530	20	FSM	ENSG00000151445.16	ENST00000557658.6	2530	20	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_12	10.5323666819209	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-19	True	NA	-15	True	AATAAA	-24	NA	77457601	77426674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
transcript_30629.known	chr14	-	1623	19	FSM	ENSG00000151445.16	ENST00000448935.6	1623	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	24.9799919935936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAGTCATGAGAATG	-4	True	NA	NA	False	NA	NA	NA	77457586	77427419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77453298_77453402_77454009_77454103_77457494
transcript_3063.known	chr1	+	1738	5	FSM	ENSG00000132768.14	ENST00000396758.6	1738	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	143.49651563714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAACCTAAATAAACCAGA	25	True	NA	-6	True	NA	NA	NA	43970024	43973340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43972157_43972335_43972414
transcript_30635.known	chr14	+	1048	9	FSM	ENSG00000100591.8	ENST00000555133.5	1048	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	280.06249302611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGCGGCAGGGGACT	-4	True	NA	NA	False	ATTAAA	-32	NA	77457869	77469247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77457983_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_30636.known	chr14	+	1173	9	FSM	ENSG00000100591.8	ENST00000535854.6	1173	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	294.200160392546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGAGATGGGGTCCTAC	158	False	NA	NA	False	NA	NA	NA	77458031	77468760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77468589
transcript_30637.known	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	51.8095973252061	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	13	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_30642.known	chr14	+	787	4	FSM	ENSG00000100591.8	ENST00000556963.5	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_2	9.39266853573691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTGTCTCTACAAAAA	93	False	NA	NA	False	NA	NA	NA	77458216	77463101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641
transcript_30644.known	chr14	-	8034	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	21.1327953977299	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTTTATTCATTCA	24	True	NA	0	True	AATAAA	-16	NA	77616637	77505996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
transcript_30645.nic	chr14	-	1875	6	NIC	ENSG00000100601.10	novel	2597	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	37.6913783244922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	-8	True	NA	-45	True	AATAAA	-34	NA	77708027	77673074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_77674242_77675655_77675795_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_30646.known	chr14	-	2597	6	FSM	ENSG00000100601.10	ENST00000216489.8	2597	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	9.26066952223218	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGCTAGGTTCTTTG	-4	True	NA	-10	True	AATAAA	-21	NA	77708023	77672403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_30647.known	chr14	-	1750	5	FSM	ENSG00000100601.10	ENST00000557057.5	1750	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	35.27304211434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	9	True	NA	-45	True	AATAAA	-34	NA	77708010	77673074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77704368_77704478_77707821
transcript_30649.nic	chr14	-	728	4	NIC	ENSG00000100601.10	novel	497	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	41.515726605174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	-8	True	NA	NA	False	AATAAA	-16	NA	77708027	77691732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_77691983_77694737_77694901_77704368_77704478_77707821
transcript_30651.known	chr14	-	497	3	FSM	ENSG00000100601.10	ENST00000554097.1	497	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	43	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	3567	False	NA	NA	False	AATAAA	-16	NA	77704452	77691732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77691983_77694737_77694901_77704368
transcript_30652.known	chr14	+	376	4	FSM	ENSG00000119705.10	ENST00000557342.6	376	4	0	0	0	0	multi-exon	FALSE	canonical	3	13033	junction_3	902.877006512453	4380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	8	True	NA	30	True	AATAAA	-18	NA	77708102	77717598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717495
transcript_30653.known	chr14	+	420	4	FSM	ENSG00000119705.10	ENST00000613856.4	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	6851.80153114655	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTGTCTAAATGTTT	0	True	NA	26	True	AATAAA	-14	NA	77708070	77717594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717479
transcript_30654.known	chr14	+	471	5	FSM	ENSG00000119705.10	ENST00000555890.5	471	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	6736.54329014518	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTGTCTAAATGTT	19	False	NA	25	True	AATAAA	-13	NA	77708113	77717593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710554_77710666_77710837_77710897_77715771_77715880_77717495
transcript_30655.known	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_13	63.9697598675717	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-5	True	NA	-26	True	AATAAA	-16	NA	77761156	77717598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_30656.known	chr14	+	445	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7612.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATAGGTATTTGTGT	26	False	NA	NA	False	ATTAAA	-13	NA	77708120	77712038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77708209_77710837_77710897_77711740
transcript_30657.known	chr14	+	3268	11	FSM	ENSG00000063761.16	ENST00000238561.10	3268	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	8.09011742807235	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGGTTACTTGCTTTT	-10	True	NA	NA	False	AGTAAA	-23	NA	77800108	77935014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_30658.nnic	chr14	+	2058	10	NIC	ENSG00000063761.16	novel	3268	11	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	13.6064617909703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	NA	False	NA	17	True	AATAAA	-17	NA	77800058	77933952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77931517_77931712_77933219
transcript_30659.nic	chr14	+	2139	10	NIC	ENSG00000063761.16	novel	3268	11	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	13.0298801904614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	NA	False	NA	17	True	AATAAA	-17	NA	77800058	77933952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_30661.known	chr14	+	1972	10	FSM	ENSG00000063761.16	ENST00000341211.5	1972	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.7921072437181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	20	True	NA	17	True	AATAAA	-17	NA	77800138	77933952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_30667.known	chr14	+	844	7	FSM	ENSG00000063761.16	ENST00000557501.5	844	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	13.9014387744578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGCGATCCCCACCCCG	16	True	NA	NA	False	NA	NA	NA	77800134	77924512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77924456
transcript_30668.nic	chr14	+	2360	2	ISM	ENSG00000021645.20	ENST00000634499.2	5412	22	0	1617516	0	-400979	5prime_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATTGGCAAATTT	-3	True	NA	NA	False	AAAAAG	-15	NA	78170372	78244448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_78170675_78242390
transcript_30675.known	chr14	-	4614	25	FSM	ENSG00000100629.17	ENST00000555265.6	4614	25	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_17	7.41608143758474	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTTGTGTTTGTTAA	-7	True	NA	NA	False	AATAAA	-22	NA	80941738	80496478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_80497583_80504911_80505021_80526868_80526983_80530808_80530887_80559278_80559303_80580373_80580424_80743074_80743268_80756891_80756952_80761436_80761614_80777881_80778047_80784894_80785546_80792759_80793111_80831142_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
transcript_30676.known	chr14	-	6343	9	FSM	ENSG00000165417.12	ENST00000553612.6	6343	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	4.48434777866302	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATTTTGCAGTTTAA	-4	True	NA	0	True	AATAAA	-25	NA	81220959	81175451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_81180331_81185530_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
transcript_30679.known	chr14	+	1130	2	FSM	ENSG00000273783.2	ENST00000618431.1	1130	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTAATTCATTTAATA	1718	False	NA	6	True	TATAAA	-17	NA	81221217	81222460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_81221526_81221638
transcript_30681.known	chr14	-	4382	9	FSM	ENSG00000140022.14	ENST00000649389.1	4382	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.89434511361011	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTATGTAATAAAGTCT	5	True	NA	14	True	NA	NA	NA	81436459	81260781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_81261932_81270669_81270873_81276900_81278740_81324016_81324188_81370987_81371186_81395893_81396179_81398294_81398581_81427101_81427213_81436320
transcript_30683.known	chr14	-	7919	21	FSM	ENSG00000071537.14	ENST00000336735.9	7919	21	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_15	20.4242502922384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCCACTGCCTCC	-13	True	NA	NA	False	TATAAA	-19	NA	81533853	81471546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_81477182_81479611_81479741_81484224_81484398_81485671_81485747_81486288_81486455_81487389_81487539_81487854_81487943_81489251_81489315_81490387_81490466_81492479_81492549_81495080_81495138_81497891_81498047_81498412_81498495_81499458_81499519_81499608_81499663_81502720_81502884_81504200_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
transcript_30686.nic	chr14	-	534	3	ISM	ENSG00000071537.14	ENST00000557372.1	594	5	-4	22385	0	-22385	5prime_fragment	FALSE	canonical	3	242	junction_1	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCACTGATTATTAC	-13	True	NA	NA	False	AATAAA	-15	NA	81533853	81526647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_81526965_81527700_81527739_81533674
transcript_30687.nnic	chr14	-	610	5	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9591	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.2557600628726	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9608	False	NA	-2	True	AATAAA	-28	NA	81613473	81605341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81608316_81608446_81613350
transcript_30688.nnic	chr14	-	569	5	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9597	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.4236228055175	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	-5	True	NA	-2	True	AATAAA	-28	NA	81613467	81605341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81608316_81608446_81613385
transcript_30689.nnic	chr14	-	461	4	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9611	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	47.6934656600531	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9	True	NA	-2	True	AATAAA	-28	NA	81613453	81605341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81613350
transcript_3069.known	chr1	+	1664	7	FSM	ENSG00000117410.14	ENST00000473485.5	1664	7	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_6	67.9397200138149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCAGCTTCTGTTGCC	33	True	NA	25	True	AATAAA	-18	NA	43974971	43978292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_30690.nnic	chr14	-	426	4	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9611	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	38.7900330841141	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9	True	NA	-2	True	AATAAA	-28	NA	81613453	81605341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81613385
transcript_30693.known	chr14	+	1294	2	FSM	ENSG00000258743.7	ENST00000670297.1	1294	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTACATGGGTTTTGA	0	True	NA	NA	False	ATTAAA	-2	NA	82642621	82652164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_82642675_82650923
transcript_30694.known	chr14	-	3794	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	15.4631618694237	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-2	True	NA	-2	True	ATTAAA	-18	NA	87993182	87933013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_30697.known	chr14	-	7501	7	FSM	ENSG00000100433.16	ENST00000340700.9	7501	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.60727512683216	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTTCTGTTTTCCTTT	23	False	NA	NA	False	NA	NA	NA	88326907	88180102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_88186156_88187966_88188110_88192223_88192411_88227374_88227536_88240702_88240821_88263201_88263552_88326418
transcript_30699.nic	chr14	+	2065	13	NIC	ENSG00000042317.17	novel	1410	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_5	23.7814119756493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTACTTTTCTTCC	-29	True	NA	10	True	AATAAA	-20	NA	88385648	88438455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88415204_88415267_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_3070.nic	chr1	+	2022	7	NIC	ENSG00000117411.18	novel	360	2	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	248.289929092762	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	32	False	NA	14	True	AGTAAA	-14	NA	43978952	43991168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43979084_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_30701.known	chr14	+	2000	12	FSM	ENSG00000042317.17	ENST00000393545.9	2000	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	15.9684606502064	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	-21	True	NA	15	True	AATAAA	-25	NA	88385656	88438460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_30702.nic	chr14	+	1969	12	NIC	ENSG00000042317.17	novel	1410	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_4	24.1773748480983	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTACTTTTCTTCC	-29	True	NA	10	True	AATAAA	-20	NA	88385648	88438455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88385838_88391380_88391456_88396155_88396204_88415204_88415267_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_30705.known	chr14	+	1891	11	FSM	ENSG00000042317.17	ENST00000356583.9	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	14.5684590811795	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTACTTTTCTTCCTTT	-10	True	NA	13	True	AATAAA	-23	NA	88385667	88438458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_30706.nic	chr14	-	1072	5	ISM	ENSG00000070778.13	ENST00000536337.5	3943	19	78240	-189	1642	4	3prime_fragment	FALSE	canonical	3	93	junction_1	5.35607132140714	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATAATGGAGTTTTT	1686	False	NA	1	True	ATTAAA	-27	NA	88472290	88467765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_88468266_88468915_88469077_88469498_88469734_88469921_88470051_88472243
transcript_3071.known	chr1	+	2629	7	FSM	ENSG00000117411.18	ENST00000356836.10	2629	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	243.846718703005	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	188	False	NA	14	True	AGTAAA	-14	NA	43979876	43991168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43980615_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_30710.known	chr14	+	2529	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	237.996980022857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	-14	True	NA	NA	False	NA	NA	NA	88563037	88611991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30712.known	chr14	+	18153	17	FSM	ENSG00000100722.20	ENST00000251038.10	18153	17	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_10	172.532967864116	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTATTCTTGTTTTTT	-15	True	NA	NA	False	ATTAAA	-17	NA	88563036	88627596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_30714.nic	chr14	+	2480	17	NIC	ENSG00000100722.20	novel	6188	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	339	junction_14	185.780406326932	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTATTGCCTATCT	8	False	NA	13	True	AATATA	-15	NA	88562977	88611867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30715.nic	chr14	+	3592	17	NIC	ENSG00000100722.20	novel	6188	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	339	junction_14	185.780406326932	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	8	False	NA	71	True	AATAAA	-35	NA	88562977	88612979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_3072.known	chr1	-	3206	14	FSM	ENSG00000196517.13	ENST00000372310.8	3206	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	11.0512523052726	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	13	True	NA	0	True	AATGAA	-21	NA	44031462	43996482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
transcript_30724.known	chr14	+	2195	16	FSM	ENSG00000100722.20	ENST00000393514.9	2195	16	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	224.904364860563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTCTACAGAACTTGTC	41	False	NA	-44	True	NA	NA	NA	88563133	88611810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_30726.nic	chr14	+	2405	16	NIC	ENSG00000100722.20	novel	6188	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_9	235.513585359505	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTATTGCCTATCT	8	False	NA	13	True	AATATA	-15	NA	88562977	88611867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30732.known	chr14	+	2075	15	FSM	ENSG00000100722.20	ENST00000556945.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	201.80744510042	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	4	True	NA	30	True	AATATA	-32	NA	88563009	88611884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_30734.nic	chr14	+	2087	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_10	215.353198258117	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTATTGCCTATCT	8	False	NA	13	True	AATATA	-15	NA	88562977	88611867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30735.nic	chr14	+	3199	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_10	215.353198258117	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	8	False	NA	71	True	AATAAA	-35	NA	88562977	88612979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30739.known	chr14	+	2560	14	FSM	ENSG00000100722.20	ENST00000302216.12	2560	14	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_9	234.441524483968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAATAGGAACAGTT	0	True	NA	NA	False	NA	NA	NA	88562969	88612407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_30740.nic	chr14	+	3127	14	NIC	ENSG00000100722.20	novel	2195	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_9	220.809886366439	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	8	False	NA	71	True	AATAAA	-35	NA	88562977	88612979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_30745.known	chr14	+	2226	15	FSM	ENSG00000165533.19	ENST00000338104.10	2226	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.5967621168826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-7	True	NA	11	True	AATAAA	-19	NA	88824655	88877988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88846597_88846676_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_30747.known	chr14	+	2183	15	FSM	ENSG00000165533.19	ENST00000380656.7	2183	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.8796448288003	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-12	True	NA	11	True	AATAAA	-19	NA	88824650	88877988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88833692_88833723_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_30748.known	chr14	+	5270	14	FSM	ENSG00000165533.19	ENST00000622513.4	5270	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	16.9911219421223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTTTTTTTTTT	-39	True	NA	NA	False	ATTAAA	-13	NA	88824623	88881078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_30749.known	chr14	+	2058	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	12.3524626424585	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-7	True	NA	11	True	AATAAA	-19	NA	88824655	88877988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_3075.known	chr1	-	1881	12	FSM	ENSG00000196517.13	ENST00000475075.6	1881	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	22.0371587015287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGACGGCTGCTGTCA	-12	True	NA	NA	False	NA	NA	NA	44031386	43997442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44024247_44024363_44031305
transcript_30750.known	chr14	+	1859	12	FSM	ENSG00000165533.19	ENST00000554686.5	1859	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	16.6256796294316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTTAAAATAAATCATTG	76	False	NA	-21	True	ATTAAA	-21	NA	88824738	88877956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88877293
transcript_30751.known	chr14	+	490	2	FSM	ENSG00000283627.1	ENST00000637466.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTAGACTTGATG	NA	False	NA	NA	False	ACTAAA	-14	NA	89013385	89025807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_89013560_89025491
transcript_30755.known	chr14	-	2716	6	FSM	ENSG00000140025.16	ENST00000555872.5	2716	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	72.4966206108947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGCTGGGCGTGGTGGC	2016	False	NA	NA	False	AATACA	-14	NA	89954557	89795146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_30757.known	chr14	-	3136	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	14.5794375748861	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGATCAATGGTATCATTG	4	True	NA	NA	False	AATAAA	-20	NA	89954730	89794668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_30759.known	chr14	-	1856	6	FSM	ENSG00000140025.16	ENST00000556005.1	1856	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	86.3263575045304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTTCACATGTGATAT	6	True	NA	NA	False	NA	NA	NA	89954523	89923325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_30760.known	chr14	-	1870	6	FSM	ENSG00000140025.16	ENST00000538485.6	1870	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	69.7613073271997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAATAAAACTGTACT	-16	True	NA	NA	False	NA	NA	NA	89954750	89923307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_30764.known	chr14	-	568	6	FSM	ENSG00000140025.16	ENST00000556609.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	73.2846505074562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTAATTTTTGTG	1796	False	NA	-23	True	ATTAAA	-6	NA	89954777	89797136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954732
transcript_30768.known	chr14	+	3722	17	FSM	ENSG00000042088.14	ENST00000335725.9	3722	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	107.025241619676	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	-22	True	NA	18	True	AATAAA	-18	NA	89955926	90044764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_3078.known	chr1	+	1472	9	FSM	ENSG00000159214.13	ENST00000372318.8	1472	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	39.0398434295016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	0	True	NA	16	True	ATTAAA	-18	NA	43991598	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43991747_43991846_43992005_43992211_43992388_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_30781.known	chr14	+	2068	16	FSM	ENSG00000042088.14	ENST00000393454.6	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	74.2962239207948	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATATGTTTTGGAAA	-11	True	NA	10	True	AATAAA	-19	NA	89955937	90043344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_30792.known	chr14	-	14008	14	FSM	ENSG00000119720.18	ENST00000354366.8	14008	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	7.83634379182464	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGAGTCTGTCTTGG	13	True	NA	-4	True	AATAAA	-14	NA	90331941	90267859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90278462_90279061_90279134_90286353_90286493_90288216_90289146_90290220_90290608_90292696_90292873_90298259_90298381_90301238_90301373_90302719_90303126_90303934_90304383_90312393_90312544_90316577_90316812_90318004_90318114_90331840
transcript_30796.known	chr14	+	4390	11	FSM	ENSG00000100764.14	ENST00000261303.13	4390	11	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_1	238.590360241146	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCAGTATTGCCTTTT	-4	True	NA	NA	False	ATTAAA	-18	NA	90256552	90275429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_30804.known	chr14	+	1389	10	FSM	ENSG00000100764.14	ENST00000543772.2	1389	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	579.537512500323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCCCATTGGGTGGCC	21	False	NA	NA	False	AAAACA	-27	NA	90256577	90272550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90256601_90259159_90259214_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_30810.known	chr14	+	577	4	FSM	ENSG00000100764.14	ENST00000554624.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_1	364.92038705571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGGATGATCTGAG	0	True	NA	NA	False	NA	NA	NA	90256527	90263670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317
transcript_30812.known	chr14	+	1104	7	FSM	ENSG00000198668.14	ENST00000447653.8	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	3999.33063843883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATGAAAAAA	-1	True	NA	8	True	NA	NA	NA	90397028	90405072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90397234_90398990_90399088_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_30816.known	chr14	+	4203	6	FSM	ENSG00000198668.14	ENST00000356978.9	4203	6	0	0	0	0	multi-exon	FALSE	canonical	3	8699	junction_5	425.749691720382	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAACTGTGTAGGTTTC	-1	True	NA	39	True	AATAAA	-26	NA	90397028	90408268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_30820.known	chr14	+	877	6	FSM	ENSG00000198668.14	ENST00000553542.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	3598.73463317317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACAGTCAGGCCTTTG	26	False	NA	-16	True	AATACA	-43	NA	90397055	90405048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_90397155_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_30824.known	chr14	-	703	4	FSM	ENSG00000258884.3	ENST00000659138.2	706	4	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGCCTTCTTACTCTTG	NA	False	NA	NA	False	NA	NA	NA	90828199	90820063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90820366_90821686_90821745_90823021_90823154_90827988
transcript_30825.known	chr14	-	26829	17	FSM	ENSG00000100784.12	ENST00000614987.5	26829	17	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_10	5.63713967806369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTTGGACTTGTGG	-24	True	NA	NA	False	AATAAA	-24	NA	91060641	90847860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_30827.known	chr14	-	2993	17	FSM	ENSG00000100784.12	ENST00000536315.6	2993	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	7.26184377413891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAT	546	False	NA	NA	False	ATTAAA	-17	NA	91060134	90871503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060017
transcript_30828.known	chr14	-	2249	13	FSM	ENSG00000100784.12	ENST00000418736.6	2249	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	6.37867541108654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAAGAGTTGTCTTGG	17	True	NA	NA	False	AATAAA	-24	NA	91060600	90893973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_30837.known	chr14	+	2957	14	FSM	ENSG00000133943.21	ENST00000256324.15	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	18.4823600531992	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAAGTCTTTTTTTTTG	-9	True	NA	NA	False	CATAAA	-21	NA	91114072	91225632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_30838.nic	chr14	+	2617	14	NIC	ENSG00000133943.21	novel	2764	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	18.259471077325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	5	True	NA	23	True	AATAAA	-19	NA	91114380	91225355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_30842.known	chr14	+	622	3	FSM	ENSG00000133943.21	ENST00000521081.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	36	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAAATACATCCAGCAT	-19	True	NA	NA	False	AAGAAA	-7	NA	91114062	91160369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_91114529_91157638_91157691_91160265
transcript_30844.known	chr14	+	2538	14	FSM	ENSG00000133943.21	ENST00000428926.6	2538	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.6903484585767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTCTTCGGAA	3	True	NA	20	True	AATAAA	-16	NA	91114441	91225352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_30845.known	chr14	+	834	7	FSM	ENSG00000133943.21	ENST00000519019.5	834	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	46.2313025268955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGCATTACCAACACCCA	12	False	NA	-11	True	AATAAA	-5	NA	91114387	91167707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167523
transcript_30848.nic	chr14	-	3365	16	NIC	ENSG00000100796.18	novel	4108	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_15	168.948065655955	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	-9	True	NA	-40	True	ATTAAA	-18	NA	91510299	91458138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505_91509705_91510074
transcript_30850.known	chr14	-	3751	12	FSM	ENSG00000165929.13	ENST00000360594.9	3751	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	8.92484692092719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTCAGGTACAGAAGT	4	True	NA	NA	False	AATAAA	-31	NA	91836447	91780954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_30855.known	chr14	-	1770	11	FSM	ENSG00000165929.13	ENST00000556018.5	1770	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.630588376307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCAACCATAGATAG	4765	False	NA	-28	True	AATAAA	-15	NA	91836526	91782822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_30857.known	chr14	-	2625	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.85227205685164	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTGGTTCATTTT	-12	True	NA	-1	True	ATTAAA	-13	NA	91947694	91869410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
transcript_30858.known	chr14	-	9996	21	FSM	ENSG00000100815.12	ENST00000267622.8	9996	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	11.0239511972795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGACTTTTTCTTTAG	-9	True	NA	0	True	AATAAA	-19	NA	92040059	91965990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_91969894_91972716_91972862_91974626_91974744_91975171_91975287_91976107_91976190_91988283_91988384_91993808_91993913_91995351_91995516_91999239_91999434_91999967_92000109_92003418_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_30864.known	chr14	-	769	3	FSM	ENSG00000100815.12	ENST00000555105.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACATGCCTGTAATCCC	33	False	NA	NA	False	AATACA	-18	NA	92040017	92030540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92030777_92033191_92033254_92039546
transcript_30866.known	chr14	-	6950	12	FSM	ENSG00000066427.25	ENST00000545170.5	6950	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.8663826931687	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	NA	False	NA	-10	True	AATAAA	-20	NA	92106621	92058551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080540_92080568_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_30869.known	chr14	-	6884	11	FSM	ENSG00000066427.25	ENST00000644486.2	6884	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	36.8667872210205	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-8	True	NA	-10	True	AATAAA	-20	NA	92106582	92058551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_30870.known	chr14	-	1205	10	FSM	ENSG00000066427.25	ENST00000340660.10	1205	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	66.1664567586931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	1	True	NA	-10	True	ATTAAA	-14	NA	92106610	92064093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_30872.known	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_8	60.7303288275815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	11	False	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
transcript_30873.known	chr14	-	2572	10	FSM	ENSG00000066427.25	ENST00000359366.10	2572	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	64.6941522344434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAAAAATATCTTTT	-16	True	NA	NA	False	NA	NA	NA	92106590	92062785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096138_92096673_92096839_92106528
transcript_30875.known	chr14	-	1010	10	FSM	ENSG00000066427.25	ENST00000554592.5	1010	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	60.0555298591784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTGCTCACCATTC	0	True	NA	NA	False	NA	NA	NA	92106574	92070934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096135_92096673_92096839_92106528
transcript_30877.known	chr14	-	6770	9	FSM	ENSG00000066427.25	ENST00000393287.9	6770	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	69.3197978574664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	NA	False	NA	-10	True	AATAAA	-20	NA	92106621	92058551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92096092_92096138_92096673_92096839_92106528
transcript_30879.known	chr14	-	848	9	FSM	ENSG00000066427.25	ENST00000556315.6	848	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	71.1284050151555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGACCTATCAGGACAGAG	0	True	NA	NA	False	NA	NA	NA	92106574	92071010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096135_92096673_92096839_92106528
transcript_3088.nnic	chr1	+	1324	8	NNC	ENSG00000159214.13	novel	1472	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	41.2439234856457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-30	True	NA	16	True	ATTAAA	-18	NA	43991774	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_43992005_43992319_43992427_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_30882.known	chr14	-	591	6	FSM	ENSG00000066427.25	ENST00000511362.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	67.6621016522543	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCATGTAGGGAGGCTG	7	True	NA	NA	False	GATAAA	-43	NA	92106567	92090378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92090568_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_30888.known	chr14	-	454	4	FSM	ENSG00000183648.11	ENST00000553514.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1245.41746682254	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTCTTTTCATACAAAG	-23	True	NA	-16	True	AATAAA	-20	NA	92121724	92116121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92116230_92117497_92117643_92118848_92118967_92121641
transcript_30892.known	chr14	-	417	3	FSM	ENSG00000183648.11	ENST00000617122.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	43	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	190	False	NA	-20	True	AATAAA	-16	NA	92121809	92116125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92116230_92117497_92117643_92121641
transcript_309.known	chr1	-	1598	12	FSM	ENSG00000221978.13	ENST00000488340.5	1598	12	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	366.946367148711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGGGTTGCAGTGACTG	-5	True	NA	NA	False	NA	NA	NA	1399328	1387231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_3090.nic	chr1	+	1390	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	16	junction_1	34.2761891530716	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-27	True	NA	16	True	ATTAAA	-18	NA	43991777	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_30900.known	chr14	+	13003	16	FSM	ENSG00000165934.13	ENST00000298875.9	13003	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.7861545080197	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGACTGTGTATAGT	-5	True	NA	3	True	AATAAA	-16	NA	92121968	92172145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357_92154459_92155122_92155324_92156478_92156632_92157658_92157885_92158982_92159283_92161111_92161247_92161651
transcript_30910.nic	chr14	+	1456	10	ISM	ENSG00000165934.13	ENST00000298875.9	13003	16	-9	17734	-9	-742	5prime_fragment	FALSE	canonical	0	0	junction_1	73.1387992150355	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAACTAAAGAAAGAAGC	-14	True	NA	NA	False	NA	NA	NA	92121959	92154411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357
transcript_30913.nnic	chr14	-	1833	2	Antisense	novelGene_ENSG00000100599.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCACAACGCCGTAAAA	1417	False	NA	NA	False	NA	NA	NA	92628005	92623614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_92625057_92627614
transcript_30915.known	chr14	-	1980	14	FSM	ENSG00000100600.15	ENST00000334869.9	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	47.9414090137623	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-2	True	NA	-14	True	AATAAA	-21	NA	92748627	92703808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_30916.known	chr14	-	1797	13	FSM	ENSG00000100600.15	ENST00000557434.5	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	138.616276902181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	5	True	NA	-44	True	NA	NA	NA	92748645	92703838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92704362_92704639_92704708_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_30917.known	chr14	-	1728	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	146.095745804417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCCGACACTGACTT	38	False	NA	-12	True	AATAAA	-23	NA	92748612	92703806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_30920.known	chr14	+	2879	13	FSM	ENSG00000066455.13	ENST00000163416.7	2879	13	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	23.0663294773043	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTTCTAAAATAAT	-32	True	NA	NA	False	AATAAA	-14	NA	92794304	92839947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92837385_92837450_92839365
transcript_30925.nic	chr14	+	1315	3	ISM	ENSG00000066455.13	ENST00000163416.7	2879	13	21	32602	21	-3358	5prime_fragment	FALSE	canonical	3	217	junction_2	26	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAACTGTTAGAAATAT	-11	True	NA	NA	False	AATAAA	-36	NA	92794325	92807345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_92794457_92797407_92797982_92806735
transcript_30926.known	chr14	+	1985	8	FSM	ENSG00000100604.13	ENST00000216492.10	1985	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	13.8091953983938	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAATTTTTTCGCCTC	0	True	NA	16	True	AATAAA	-18	NA	92923149	92935285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_92923406_92924198_92924246_92926604_92926699_92927549_92927619_92929716_92929816_92931249_92931703_92932369_92932852_92934800
transcript_30927.known	chr14	+	3494	11	FSM	ENSG00000012963.15	ENST00000013070.11	3494	11	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	29.7430664189152	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	-4	True	NA	14	True	AATAAA	-15	NA	93207255	93229215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93207442_93209823_93209958_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_30933.nic	chr14	+	3426	10	NIC	ENSG00000012963.15	novel	3494	11	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_3	84.8778352314681	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	13	True	NA	14	True	AATAAA	-15	NA	93207227	93229215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_93207442_93209823_93209958_93210647_93210709_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_30934.known	chr14	+	1276	10	FSM	ENSG00000012963.15	ENST00000553674.1	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	87.096087139789	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	-17	True	NA	21	True	AATAAA	-22	NA	93207242	93227118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93207442_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_30938.known	chr14	+	909	2	FSM	ENSG00000153485.6	ENST00000283534.4	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGCTTGCTTTAAAA	NA	False	NA	7	True	CATAAA	-18	NA	93184950	93187086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93185033_93186259
transcript_30939.known	chr14	+	2373	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGCATTTCTTTTCT	2	True	NA	5	True	AATACA	-18	NA	93185316	93188463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93185486_93186259
transcript_30940.known	chr14	-	1125	2	FSM	ENSG00000170270.5	ENST00000306954.5	1125	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTTTCTT	-11	True	NA	-3	True	AATATA	-14	NA	93207065	93202893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93203783_93206829
transcript_30941.known	chr14	-	398	2	FSM	ENSG00000170270.5	ENST00000556566.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTTCTTGAGAAATAA	25	True	NA	NA	False	AATAAA	-2	NA	93207029	93203505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93203783_93206908
transcript_30942.known	chr14	-	2621	4	FSM	ENSG00000011114.15	ENST00000298896.7	2621	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	23.2283351869125	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGGCTCTTGTGGTGC	206	False	NA	0	True	ATTAAA	-19	NA	93333092	93287627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93288708_93293857_93294938_93295969_93296158_93332819
transcript_30943.nic	chr14	+	1485	9	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	195748	-368	-15604	0	3prime_fragment	FALSE	canonical	3	9	junction_3	14.789671226907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	NA	False	NA	5	True	AATAAA	-15	NA	93673388	93707272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_93673456_93682616_93682695_93686571_93686662_93688664_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_30944.known	chr14	+	9100	51	FSM	ENSG00000133958.13	ENST00000553484.5	9100	51	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	10.8326174122416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGCCTGGGGTTT	14	False	NA	21	True	ATTAAA	-15	NA	93430875	93707876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_93431052_93467670_93467792_93474088_93474394_93477557_93477729_93487662_93487756_93496410_93496467_93497156_93497287_93523977_93524043_93528557_93528647_93529285_93529327_93532549_93532579_93537988_93538219_93540659_93540832_93542465_93542697_93571893_93572085_93572692_93572817_93575057_93575199_93577841_93578064_93580148_93580377_93582202_93582345_93586595_93586676_93586759_93586909_93593679_93593838_93597358_93597541_93600568_93600771_93603238_93603419_93604895_93604962_93612796_93613084_93617121_93617305_93618191_93618355_93621620_93622842_93630800_93630909_93634520_93634638_93637215_93637300_93641144_93641248_93643556_93643698_93646607_93646647_93653741_93653855_93653939_93654026_93655233_93655408_93659192_93659262_93662603_93662715_93673350_93673456_93682616_93682695_93686571_93686662_93688664_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_30945.nic	chr14	+	1357	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210917	-368	-435	0	3prime_fragment	FALSE	canonical	3	34	junction_1	4.8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	NA	False	NA	5	True	AATAAA	-15	NA	93688557	93707272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_30947.nic	chr14	+	1961	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210917	-972	-435	0	3prime_fragment	FALSE	canonical	3	34	junction_1	4.8	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGCCTGGGGTTT	NA	False	NA	21	True	ATTAAA	-15	NA	93688557	93707876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_30949.known	chr14	-	2168	3	FSM	ENSG00000100628.12	ENST00000553883.1	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGCCCAGTGAAGTCC	NA	False	NA	-14	True	AATAAA	-14	NA	93940495	93934166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_93934793_93937697_93937852_93939107
transcript_30951.known	chr14	-	2769	9	FSM	ENSG00000089737.18	ENST00000555054.1	2769	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	264.167560461159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTAAACTTGATTTC	3	True	NA	10	True	NA	NA	NA	94081202	94050964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079622_94081118
transcript_30952.known	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	98.6280100934821	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	3	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_30956.known	chr14	-	810	2	FSM	ENSG00000089737.18	ENST00000555324.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGATAATTGGGAGAGA	59	False	NA	NA	False	NA	NA	NA	94081146	94078965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94079748_94081118
transcript_30959.known	chr14	+	629	6	FSM	ENSG00000165948.11	ENST00000555341.5	629	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	38.2549343222544	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTTCACCCCCTTC	26	False	NA	NA	False	GGGGCT	-24	NA	94081374	94102541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096855_94096966_94097494_94097679_94100738_94100772_94101813_94101976_94102476
transcript_30961.known	chr14	+	615	6	FSM	ENSG00000165948.11	ENST00000554166.5	615	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	53.5932831612321	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGGCTGGGTTCACCC	7	True	NA	NA	False	GGGGCT	-19	NA	94081355	94102536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94097491_94097679_94100738_94100772_94101813_94101976_94102476
transcript_30962.known	chr14	+	804	6	FSM	ENSG00000165948.11	ENST00000556381.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	57.769888350247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACAAGTCTCCTACTC	7	True	NA	-49	True	NA	NA	NA	94081355	94102641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94097491_94097679_94100738_94100772_94101813_94102060_94102476
transcript_30965.known	chr14	+	647	6	FSM	ENSG00000165948.11	ENST00000553664.1	647	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	61.6311609496365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGTGTCGGTTCTCTG	16	True	NA	18	True	AATAAA	-16	NA	94081364	94102708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94088247_94088304_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_30966.nic	chr14	+	711	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	32.5221078652661	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	19	True	AATAAA	-17	NA	94081276	94102709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94101976_94102476
transcript_30967.nic	chr14	+	795	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	50.3655388137564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	19	True	AATAAA	-17	NA	94081276	94102709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94102060_94102476
transcript_30969.known	chr14	+	647	5	FSM	ENSG00000165948.11	ENST00000555523.6	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	8.22724133595217	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	4	True	NA	19	True	AATAAA	-17	NA	94081309	94102709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_3097.nnic	chr1	+	1300	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	40.4423457941467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-27	True	NA	16	True	ATTAAA	-18	NA	43991777	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992005_43992522_43992640_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_30970.nic	chr14	+	761	5	NIC	ENSG00000165948.11	novel	647	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	50.6624861213897	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	19	True	AATAAA	-17	NA	94081279	94102709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94102060_94102476
transcript_30977.known	chr14	+	413	4	FSM	ENSG00000165948.11	ENST00000557218.5	413	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	59.5371032774241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	33	False	NA	19	True	AATAAA	-17	NA	94081381	94102709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94102476
transcript_30979.known	chr14	+	828	3	FSM	ENSG00000165948.11	ENST00000557600.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTGGAGATTTTGGG	5	True	NA	NA	False	AAAACA	-36	NA	94081310	94101348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096886_94096966_94100738
transcript_30980.known	chr14	+	674	5	FSM	ENSG00000165948.11	ENST00000393115.7	674	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.8088901493419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	23	False	NA	19	True	AATAAA	-17	NA	94081328	94102709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94081450_94096840_94096966_94100738_94100772_94101813_94101976_94102476
transcript_30982.known	chr14	+	644	5	FSM	ENSG00000165949.13	ENST00000621160.5	652	5	13	-5	2	0	multi-exon	FALSE	canonical	1	1	junction_1	4.49305018890286	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAATCTCTTCTTCTCG	12	False	NA	9	True	AATAAA	-21	NA	94110748	94116695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94110798_94111624_94111774_94114850_94114881_94115780_94115943_94116441
transcript_30984.known	chr14	-	451	4	FSM	ENSG00000119632.4	ENST00000238609.4	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	35.8360464089194	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	-19	True	NA	-11	True	AATAAA	-18	NA	94129604	94127780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94127993_94128513_94128676_94129261_94129292_94129557
transcript_30986.known	chr14	-	938	2	FSM	ENSG00000119632.4	ENST00000556552.1	938	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCCTTCTGAGTGA	5	True	NA	NA	False	NA	NA	NA	94129580	94128376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94129292_94129557
transcript_30987.known	chr14	-	516	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	1	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGCTTCTTGCA	277	False	NA	-9	True	AATAAA	-20	NA	94129401	94127778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_94127993_94128513_94128676_94129261
transcript_30988.known	chr14	+	2278	6	FSM	ENSG00000188488.14	ENST00000329597.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.52380257212004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAACTGTCTTTATGGA	-12	True	NA	10	True	AATAAA	-18	NA	94581425	94593118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94581491_94581614_94581711_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_30989.known	chr14	+	2211	5	FSM	ENSG00000188488.14	ENST00000554866.5	2211	5	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	3.34477204006491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTATAACTGTCTTTAT	-3	True	NA	7	True	AATAAA	-15	NA	94581393	94593115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_94581491_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_3099.nnic	chr1	+	1214	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	37.7211994624891	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-27	True	NA	16	True	ATTAAA	-18	NA	43991777	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992005_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_30992.known	chr14	-	10384	27	FSM	ENSG00000100697.15	ENST00000343455.8	10384	27	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_26	18.2861864636839	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCCTTTCATCTTT	-4	True	NA	-5	True	AATAAA	-16	NA	95157529	95086227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95157229
transcript_30996.known	chr14	+	723	4	FSM	ENSG00000235706.9	ENST00000435343.2	817	4	83	11	75	0	multi-exon	FALSE	canonical	3	11	junction_1	1.69967317119759	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	80	False	NA	3	True	AATAAA	-15	NA	95157759	95179925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503
transcript_30997.nnic	chr14	+	761	3	NIC	ENSG00000235706.9	novel	817	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	5	True	NA	3	True	AATAAA	-15	NA	95157684	95179925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_95157859_95158875_95159036_95179498
transcript_30998.known	chr14	+	650	2	FSM	ENSG00000235706.9	ENST00000661445.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTTTGGGCTGTCAC	1139	False	NA	9	True	AATAAA	-21	NA	95158818	95179931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95159036_95179498
transcript_31.known	ERCC-00081	+	517	1	FSM	ERCC-00081A	DQ854991	517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00081_+_0_500
transcript_310.known	chr1	-	3112	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_6	293.571132777049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-12	True	NA	-15	True	CATAAA	-17	NA	1399335	1385710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_31000.nnic	chr14	+	869	2	NNC	ENSG00000182512.5	novel	912	2	NA	NA	-407	49	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATTCCGAAGTGCATAT	NA	False	NA	69	True	AATAAA	-31	NA	95534642	95544606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_95534852_95543946
transcript_31001.known	chr14	+	1103	2	FSM	ENSG00000182512.5	ENST00000331334.5	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTCGAGCCCTGGTCT	8	True	NA	14	True	ATTAAA	-14	NA	95535049	95544714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95535385_95543946
transcript_31003.known	chr14	-	981	2	FSM	ENSG00000247092.8	ENST00000554169.2	1375	2	394	0	-10	0	multi-exon	FALSE	canonical	3	99	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAGGATCAGTAACAAA	3	True	NA	NA	False	NA	NA	NA	95534245	95532633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95533062_95533692
transcript_31005.known	chr14	-	428	2	FSM	ENSG00000247092.8	ENST00000553559.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	NA	False	NA	-36	True	ATTAAA	-14	NA	95534872	95532913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_95533062_95534592
transcript_31006.known	chr14	+	1142	4	FSM	ENSG00000213231.13	ENST00000340722.8	1142	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	6.64997911442	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	-1	True	NA	11	True	ATTAAA	-18	NA	95686425	95692628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95686630_95690735_95690907_95691267_95691337_95691930
transcript_31007.known	chr14	+	1724	3	FSM	ENSG00000213231.13	ENST00000464815.5	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	11	False	NA	11	True	ATTAAA	-18	NA	95686437	95692628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_95686630_95690735_95690907_95691267
transcript_31009.nnic	chr14	-	876	3	Antisense	novelGene_ENSG00000250366.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	3	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTTTTGAGTCTGAT	NA	False	NA	NA	False	NA	NA	NA	95975491	95920169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_95920810_95921434_95921513_95975333
transcript_3101.nnic	chr1	+	1626	7	NNC	ENSG00000159214.13	novel	1659	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	38.2695120893324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-17	True	NA	16	True	ATTAAA	-18	NA	43991787	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_43992427_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_31011.nnic	chr14	-	397	3	Antisense	novelGene_ENSG00000250366.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	2	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATCTTACCAGTTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	95975491	95920855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr14_-_95921017_95921434_95921513_95975333
transcript_31013.known	chr14	+	774	3	FSM	ENSG00000227051.7	ENST00000556728.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	41.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTCTGTGTCTGGTTC	15	True	NA	11	True	AAGAAA	-6	NA	96039371	96093887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96039528_96086510_96086763_96093521
transcript_31016.known	chr14	+	7627	2	FSM	ENSG00000227051.7	ENST00000555004.3	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCTGATGCTTTTCC	5	True	NA	95	True	TTTAAA	-21	NA	96039361	96093971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96039528_96086510
transcript_31018.known	chr14	+	760	4	FSM	ENSG00000100744.15	ENST00000554182.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	184.186499686233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTTCATATAATATCT	1	True	NA	NA	False	NA	NA	NA	96363525	96385912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96363569_96379687_96379756_96382246_96382506_96385522
transcript_31019.known	chr14	+	2169	4	FSM	ENSG00000100744.15	ENST00000555181.6	2169	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	56.2217830461547	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGTTTCCATTTTTTA	1	True	NA	26	True	GATAAA	-14	NA	96363525	96387288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96363569_96379687_96379789_96382246_96382506_96385522
transcript_31023.known	chr14	+	2140	3	FSM	ENSG00000100744.15	ENST00000438650.5	2140	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	212.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTGTTTCCATTTTT	NA	False	NA	24	True	GATAAA	-12	NA	96363451	96387286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96363569_96382246_96382506_96385522
transcript_31026.known	chr14	+	3283	18	FSM	ENSG00000140057.9	ENST00000267584.9	3283	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	7.27797074269249	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTCTGGCTTCTTTC	-9	True	NA	16	True	AATAAA	-19	NA	96392127	96489427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96392260_96398074_96398264_96404756_96404866_96408846_96408942_96420821_96420933_96437834_96437916_96442729_96442819_96446516_96446608_96449801_96449880_96451420_96451571_96456346_96456476_96458082_96458213_96471477_96471607_96472686_96472756_96478464_96478663_96482998_96483220_96486897_96487057_96488304
transcript_31032.known	chr14	+	1345	2	FSM	ENSG00000140057.9	ENST00000555570.1	1345	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGCATCCCCTCCAGAC	-4	True	NA	NA	False	AATAAA	-16	NA	96392132	96399292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96392260_96398074
transcript_31034.known	chr14	+	4515	22	FSM	ENSG00000090060.19	ENST00000216277.13	4515	22	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_21	456.193881088794	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCTGATTTCTTTTG	-29	True	NA	17	True	AATAAA	-21	NA	96502381	96567116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_31035.known	chr14	+	2588	21	FSM	ENSG00000090060.19	ENST00000392990.6	2588	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_19	554.294154759005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCATTAGAAAGTAGAA	-8	True	NA	NA	False	AATACA	-45	NA	96502557	96565428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96562818_96562894_96564954
transcript_31039.known	chr14	+	2173	12	FSM	ENSG00000090060.19	ENST00000618976.2	2173	12	0	0	0	0	multi-exon	TRUE	canonical	3	1207	junction_11	375.925876287879	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTCTCTGTGTTTT	-35	True	NA	5	True	ATTAAA	-18	NA	96502375	96537901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975
transcript_3104.known	chr1	+	728	6	FSM	ENSG00000159214.13	ENST00000490064.5	728	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	36.149688795341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGGGCTGGTCACCGA	-31	True	NA	NA	False	NA	NA	NA	43991773	43996155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_43992005_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_31041.known	chr14	+	3264	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	0	0	0	0	multi-exon	FALSE	canonical	3	1962	junction_7	93.3109720236586	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	-10	True	NA	8	True	AATAAA	-9	NA	96502400	96534885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
transcript_31043.known	chr14	+	1421	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2070	junction_3	74.1681647788771	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAATGTTGTTTTTTT	30	True	NA	NA	False	ATTAAA	-8	NA	96502440	96532248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
transcript_31044.known	chr14	-	1512	1	FSM	ENSG00000260806.1	ENST00000569214.1	1512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTAGTTC	456	False	NA	NA	False	AAAAAG	-39	NA	96502321	96500809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_96500800_96502300
transcript_31045.known	chr14	+	3030	1	FSM	ENSG00000258702.4	ENST00000553378.1	3030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCCCAGTGCAGCGGTG	NA	False	NA	NA	False	NA	NA	NA	96592732	96595762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96592700_96595800
transcript_31047.known	chr14	+	1704	14	FSM	ENSG00000100749.9	ENST00000679770.1	1704	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	329.004595209002	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTATGTTGTGGCTGT	22	True	NA	27	True	AATAAA	-24	NA	96797405	96881606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96877505_96877574_96881176
transcript_31050.known	chr14	+	1682	13	FSM	ENSG00000100749.9	ENST00000680683.1	1682	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	261.89834488892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTATGTTGTGGCTG	-4	True	NA	26	True	AATAAA	-23	NA	96797379	96881605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881155
transcript_31051.known	chr14	+	1634	13	FSM	ENSG00000100749.9	ENST00000680849.1	1634	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	257.709569520075	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTATGTTGTGGCTGT	21	True	NA	27	True	AATAAA	-24	NA	96797404	96881606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837815_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_31053.known	chr14	+	1681	13	FSM	ENSG00000100749.9	ENST00000679758.1	1681	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	341.326171799872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTCATTTCAAAATAAT	-10	True	NA	NA	False	AAAAAG	-15	NA	96797373	96945418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96943516_96943681_96945048
transcript_31054.known	chr14	+	1435	13	FSM	ENSG00000100749.9	ENST00000680538.1	1435	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	258.018033392156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTTCAGGTTATACT	NA	False	NA	36	True	ATTAAA	-19	NA	96797313	96881403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860646_96860736_96876029_96876121_96881176
transcript_31056.known	chr14	+	1823	12	FSM	ENSG00000100749.9	ENST00000681419.1	1823	12	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_10	84.2273585830892	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAAGGAATTAAAGCT	8	True	NA	NA	False	TATAAA	-35	NA	96797391	96876723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029
transcript_31057.known	chr14	+	6456	12	FSM	ENSG00000100749.9	ENST00000681524.1	6456	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	267.667982322	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTTTGTGATGCCTGC	-37	True	NA	NA	False	AATAAA	-24	NA	96797346	96886488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_31059.known	chr14	+	1520	12	FSM	ENSG00000100749.9	ENST00000680922.1	1520	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	403.958593737707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAACA	3	True	NA	NA	False	AAGAAA	-23	NA	96797386	96945391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96943516_96943681_96945048
transcript_31061.known	chr14	+	1070	11	FSM	ENSG00000100749.9	ENST00000680348.1	1070	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	354.480535431778	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACCTCAGTGTTGTGGA	11	True	NA	NA	False	ACTAAA	-29	NA	96797394	96860681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852836_96852944_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_31064.known	chr14	+	1202	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	289.800101389617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTAGCAAGTTACTA	1	True	NA	NA	False	AATAAA	-18	NA	96797384	96860922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
transcript_31067.known	chr14	+	1816	14	FSM	ENSG00000100749.9	ENST00000553683.2	1816	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	322.458694203545	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGGCTGTAAGGTT	NA	False	NA	33	True	AATAAA	-30	NA	96797303	96881612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96877501_96877574_96881176
transcript_31068.known	chr14	+	1444	13	FSM	ENSG00000100749.9	ENST00000679903.1	1444	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	258.052912317524	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCAGGTTATACTCC	4	True	NA	38	True	ATTAAA	-21	NA	96797387	96881405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876038_96876121_96881176
transcript_31069.known	chr14	+	1130	11	FSM	ENSG00000100749.9	ENST00000680509.1	1130	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	281.446193791993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTTGTTATTAAATT	-7	True	NA	NA	False	AAAACA	-10	NA	96797376	96860735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_96797434_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_3107.nnic	chr1	+	1162	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-40	0	intron_retention	FALSE	canonical	2	7	junction_1	35.3530762452152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-12	True	NA	16	True	ATTAAA	-18	NA	43992181	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992388_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_31072.known	chr14	-	2856	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	29.3300187521249	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTATTCCTTTT	4	True	NA	-6	True	ATTAAA	-17	NA	99480859	99397747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_31076.known	chr14	-	1330	9	FSM	ENSG00000183576.13	ENST00000329331.7	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	110.726013203763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATCTTTTTTCTTTGT	3	True	NA	-1	True	AATAAA	-18	NA	99480788	99409803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_99410216_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_31079.known	chr14	+	936	7	FSM	ENSG00000090061.17	ENST00000557441.5	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.93725393319377	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCATGTATAGGAGATG	-5	True	NA	NA	False	AATACA	-14	NA	99481411	99502312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_99481615_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99501355_99501414_99502206
transcript_3108.nnic	chr1	+	1161	6	NNC	ENSG00000159214.13	novel	1659	8	NA	NA	-34	0	intron_retention	FALSE	canonical	1	1	junction_1	37.7433437840369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-6	True	NA	16	True	ATTAAA	-18	NA	43992187	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_43992388_43993798_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_31080.known	chr14	+	2241	8	FSM	ENSG00000182218.10	ENST00000357223.2	2241	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	11.4481974340852	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTCTCAGCCCTTAGA	11	False	NA	NA	False	AATAAA	-20	NA	99645142	99669277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_99645463_99652223_99652871_99656999_99657144_99659427_99659757_99660279_99660407_99662875_99663022_99668221_99668304_99668831
transcript_31083.known	chr14	+	6534	5	FSM	ENSG00000100811.14	ENST00000262238.10	6534	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	30.0613955098562	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTGTGGTTCTTGT	-13	True	NA	19	True	AATAAA	-19	NA	100239143	100282788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
transcript_31086.known	chr14	+	1923	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	31.5700279801375	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	30	True	NA	32	True	AATAAA	-36	NA	100376484	100530303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_31087.known	chr14	+	1952	7	FSM	ENSG00000176473.14	ENST00000554998.5	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	27.7093044942589	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGCTGTTTGTTAAG	-22	True	NA	0	True	AATAAA	-4	NA	100376432	100530271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100376505_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_31088.known	chr14	+	2123	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	37.9956137819442	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	39	True	NA	32	True	AATAAA	-36	NA	100376493	100530303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_3109.nnic	chr1	+	1110	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-24	0	intron_retention	FALSE	canonical	1	4	junction_1	36.5480505636074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	4	True	NA	16	True	ATTAAA	-18	NA	43992197	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992388_43993839_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_31090.known	chr14	+	705	6	FSM	ENSG00000176473.14	ENST00000555775.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	40.4049501917772	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGACTTGCTGGTGAC	-37	True	NA	NA	False	NA	NA	NA	100376417	100529855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100376496_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_311.known	chr1	-	3082	6	FSM	ENSG00000221978.13	ENST00000418865.6	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_5	64.8740317846825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAGCTATGTATGAA	9716	False	NA	-47	True	AATAAA	-15	NA	1392525	1386712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765
transcript_3110.nnic	chr1	+	1060	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-24	0	intron_retention	FALSE	canonical	3	6	junction_1	35.7513636103576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	4	True	NA	16	True	ATTAAA	-18	NA	43992197	43996528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_43992388_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_31104.known	chr14	-	3092	11	FSM	ENSG00000140105.18	ENST00000355338.6	3092	11	0	0	0	0	multi-exon	FALSE	canonical	3	752	junction_10	201.354513234742	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAATAAACTTCCTT	NA	False	NA	-38	True	NA	NA	NA	100376805	100333817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100376259
transcript_31114.known	chr14	-	2466	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_9	330.498090243077	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTCCTGCTCTTGTC	-23	True	NA	-22	True	AATAAA	-4	NA	100376335	100333801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
transcript_31130.known	chr14	-	2690	10	FSM	ENSG00000140105.18	ENST00000344102.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_9	384.085381454324	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACCCAGTAGAGTAAAT	4	True	NA	-48	True	NA	NA	NA	100375608	100333827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100375282
transcript_31131.known	chr14	-	2639	11	FSM	ENSG00000140105.18	ENST00000392882.7	2639	11	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_10	275.829657578731	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCATTGTGCTCTGT	-1	True	NA	-10	True	AATAAA	-16	NA	100375347	100333789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282
transcript_31133.known	chr14	+	1426	6	FSM	ENSG00000214548.18	ENST00000521404.5	1426	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.93473376995095	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCTCAATAAATGTGTT	7	False	NA	NA	False	NA	NA	NA	100826125	100860989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100836166_100836301_100845457_100845534_100860690
transcript_31141.known	chr14	+	2102	1	FSM	ENSG00000197406.7	ENST00000510508.4	2102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGCCTTTGGTCCCT	NA	False	NA	26	True	AATAAA	-20	NA	101561350	101563452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101561400_101563500
transcript_31142.nic	chr14	+	1667	14	ISM	ENSG00000078304.19	ENST00000328724.9	4045	15	-15	15060	0	0	5prime_fragment	TRUE	canonical	3	56	junction_2	152.56850241447	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	76	False	NA	20	True	AATAAA	-22	NA	101761869	101912625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_101761921_101762904_101762971_101786017_101786184_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
transcript_31143.known	chr14	+	3845	13	FSM	ENSG00000078304.19	ENST00000350249.7	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_12	98.0281634701647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTGCGTTTGGCATC	-16	True	NA	NA	False	AATAAA	-22	NA	101809802	101927519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101925140
transcript_31144.known	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	27.9766726912982	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	12	False	NA	20	True	AATAAA	-22	NA	101809894	101912625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
transcript_31147.known	chr14	+	735	2	FSM	ENSG00000078304.19	ENST00000556946.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTTTAAATCCTAAG	16	True	NA	NA	False	ATTAAA	-19	NA	101809834	101836701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101810037_101836168
transcript_31148.known	chr14	-	448	2	FSM	ENSG00000259088.1	ENST00000554859.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGGGCTGAAGCTAGA	9194	False	NA	NA	False	NA	NA	NA	101810321	101796554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_101796898_101810216
transcript_31149.known	chr14	+	1079	1	FSM	ENSG00000271780.1	ENST00000607414.1	1079	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTTGAATAAGTGAT	-3	True	NA	83	True	ATTAAA	-36	NA	101948346	101949425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_101948300_101949400
transcript_31151.nic	chr14	+	1465	7	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-22	21211	-22	-6133	5prime_fragment	FALSE	canonical	3	94	junction_4	16.303544263612	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAATCTGAAGATG	13	True	NA	NA	False	AAGAAA	-3	NA	101964550	101983472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381
transcript_31152.known	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	1169.78661612823	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-11	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
transcript_31168.known	chr14	+	2067	4	FSM	ENSG00000140153.18	ENST00000454394.2	2067	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	59.1739432145227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGCGCTCCTGTATTAG	14	True	NA	-96	True	NA	NA	NA	102139913	102210134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102194937_102195121_102197754_102197848_102208602
transcript_31169.known	chr14	+	2616	4	FSM	ENSG00000140153.18	ENST00000335263.9	2616	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	41.1204193666467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGTTTATCTTCTGTT	420	False	NA	NA	False	ATTAAA	-16	NA	102139843	102223673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102194937_102195121_102208602_102209863_102222829
transcript_31175.known	chr14	+	491	3	FSM	ENSG00000140153.18	ENST00000557485.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	57	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACATGTACTTATATAA	79	False	NA	NA	False	NA	NA	NA	102139502	102208683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102139730_102194937_102195121_102208602
transcript_31177.known	chr14	+	2384	3	FSM	ENSG00000140153.18	ENST00000342702.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	12.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTAGCACTTTGAT	-3	True	NA	18	True	AATAAA	-18	NA	102139896	102210527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102194937_102195121_102208602
transcript_31180.known	chr14	+	2198	3	FSM	ENSG00000140153.18	ENST00000299135.6	2198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTGTAGCACTTTG	11	True	NA	16	True	AATAAA	-16	NA	102139910	102210525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102193462_102193476_102208602
transcript_31181.known	chr14	+	2382	3	FSM	ENSG00000140153.18	ENST00000556807.1	2382	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTGTTTATCTTCTG	-7	True	NA	NA	False	ATTAAA	-14	NA	102139892	102223671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102140173_102208602_102209863_102222829
transcript_31185.known	chr14	-	3228	11	FSM	ENSG00000080824.19	ENST00000216281.13	3228	11	0	0	0	0	multi-exon	FALSE	canonical	3	2377	junction_7	348.424468141949	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTGTCTCAAAGTTC	-1	True	NA	-5	True	AATACA	-19	NA	102087044	102080741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_31186.known	chr14	-	4270	6	FSM	ENSG00000100865.15	ENST00000559514.5	4270	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	175.419041155742	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACAGTGTGCTTTTTTTT	NA	False	NA	2	True	ATTAAA	-20	NA	102362916	102341101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102344390_102348278_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_31188.known	chr14	-	953	5	FSM	ENSG00000100865.15	ENST00000216756.11	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_4	40.1707293934277	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTGATCTAGTTTC	-9	True	NA	-2	True	AGTAAA	-23	NA	102362890	102348281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_31190.known	chr14	-	572	4	FSM	ENSG00000100865.15	ENST00000541568.6	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	212.540715053741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGTCTGCCTAGGAC	13	True	NA	NA	False	NA	NA	NA	102362868	102348510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_102348760_102355767_102355898_102359418_102359588_102362844
transcript_31191.known	chr14	+	8704	20	FSM	ENSG00000196663.16	ENST00000359520.12	8704	20	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	12.0147646933729	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTCTCTAACTACT	-5	True	NA	12	True	AATAAA	-21	NA	102362940	102502477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_102363117_102376649_102376941_102407337_102407467_102408487_102408620_102414635_102414794_102424978_102425292_102428249_102428383_102431795_102432129_102434234_102435212_102438021_102438206_102440435_102440610_102443646_102443828_102445805_102445948_102449628_102449870_102450559_102450650_102452393_102452628_102465140_102465290_102496978_102497121_102497569_102497720_102498102
transcript_31196.known	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_1	242.614274003846	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	25	True	NA	9	True	AATAAA	-22	NA	103334236	103345025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_312.known	chr1	-	1186	6	FSM	ENSG00000221978.13	ENST00000408918.8	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	190.28189614359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGATTTCATTTGTTT	6	True	NA	-41	True	AATACA	-18	NA	1399317	1392287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_31202.nic	chr14	+	1887	11	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	753.300345147936	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATGTTTGGCTCTGAA	-30	True	NA	9	True	AATAAA	-20	NA	103334181	103341356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_31204.nic	chr14	+	3702	11	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-7	-57	intron_retention	FALSE	canonical	3	76	junction_1	753.300345147936	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTGCTTTAATAT	-30	True	NA	-14	True	ATTAAA	-18	NA	103334181	103343171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_31205.nic	chr14	+	960	7	ISM	ENSG00000100664.11	ENST00000216554.8	5710	12	-58	6677	-10	0	5prime_fragment	FALSE	canonical	3	1777	junction_1	303.847915173949	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	-33	True	NA	NA	False	NA	NA	NA	103334178	103338348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_31208.nic	chr14	+	748	6	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	1006.94694994324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	-30	True	NA	NA	False	NA	NA	NA	103334181	103338348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_31209.nic	chr14	+	968	2	ISM	ENSG00000100664.11	ENST00000560338.5	580	4	45	229	0	-132	intron_retention	FALSE	canonical	3	76	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTCGTACAAATGTG	25	True	NA	NA	False	NA	NA	NA	103334236	103336596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_+_103334261_103335652
transcript_31210.nic	chr14	-	1381	7	ISM	ENSG00000166165.14	ENST00000348956.7	1420	8	299	0	165	0	3prime_fragment	FALSE	canonical	3	3069	junction_5	296.151800414735	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	6578	False	NA	-9	True	AATAAA	-19	NA	103522531	103519666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022_103522178_103522300
transcript_31211.nic	chr14	-	1242	6	ISM	ENSG00000166165.14	ENST00000348956.7	1420	8	561	0	33	0	3prime_fragment	FALSE	canonical	3	3069	junction_5	317.434087646554	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	6840	False	NA	-9	True	AATAAA	-19	NA	103522269	103519666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022
transcript_31212.known	chr14	-	270	3	FSM	ENSG00000166165.14	ENST00000555039.1	270	3	0	0	0	0	multi-exon	FALSE	canonical	2	60	junction_2	1939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCCTGGGCTTCTCAGAG	8008	False	NA	NA	False	NA	NA	NA	103521101	103519991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103520043_103520121_103520312_103521072
transcript_31213.known	chr14	-	735	3	FSM	ENSG00000166165.14	ENST00000554282.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	1915	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTGCCTGCGTCTG	7666	False	NA	-21	True	AATAAA	-7	NA	103521443	103519678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103520043_103520121_103520312_103521262
transcript_31216.known	chr14	+	3217	4	FSM	ENSG00000166166.13	ENST00000389749.9	3217	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	10.2740233382816	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	9	True	NA	8	True	ATTAAA	-19	NA	103529195	103537073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103529262_103529949_103530310_103532581_103532849_103534549
transcript_31220.nnic	chr14	+	1995	4	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	-6	-1028	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	59.4773532998532	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGAGTGATCCCTAGC	3	True	NA	9	True	AATAAA	-16	NA	103529189	103536045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr14_+_103529262_103530149_103530310_103532581_103532849_103534549
transcript_31221.known	chr14	+	2827	3	FSM	ENSG00000166166.13	ENST00000299202.4	2827	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	2	True	NA	8	True	ATTAAA	-19	NA	103529225	103537073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103529262_103532581_103532849_103534549
transcript_31223.known	chr14	+	2265	15	FSM	ENSG00000126214.22	ENST00000557450.5	2265	15	0	0	0	0	multi-exon	FALSE	canonical	2	93	junction_13	81.7109140163525	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	27	False	NA	-10	True	NA	NA	NA	103629240	103701514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103700654_103700728_103701200
transcript_31224.known	chr14	-	4684	2	FSM	ENSG00000166170.12	ENST00000299204.6	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTGTGAGTCTGAGG	-1	True	NA	-7	True	AATAAA	-26	NA	103562657	103556550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103561193_103562615
transcript_31229.known	chr14	+	2505	18	FSM	ENSG00000256500.6	ENST00000472726.3	2505	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	137.151369916221	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTCACTTTGGTAACA	-13	True	NA	43	True	AATACA	-25	NA	103562961	103685924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985_103685037_103685637
transcript_31230.known	chr14	+	783	6	FSM	ENSG00000256053.9	ENST00000556253.6	783	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	245.554393159642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCACATCTTCCTAAGGG	12	True	NA	NA	False	GGGGCT	-30	NA	103562986	103590384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103581568_103581657_103587273_103587365_103590180
transcript_31234.known	chr14	+	2506	5	FSM	ENSG00000256053.9	ENST00000674165.1	2506	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_2	35.2526594741446	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	-12	True	NA	NA	False	NA	NA	NA	103562962	103592171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_31236.known	chr14	+	906	5	FSM	ENSG00000256053.9	ENST00000477116.5	906	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	218.846264532891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTTTCCTGTGTTTC	136	False	NA	22	True	AATAAA	-14	NA	103563172	103590526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563380_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_31238.known	chr14	+	782	4	FSM	ENSG00000256053.9	ENST00000458117.6	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	210.086225684175	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	4	True	NA	23	True	AATAAA	-15	NA	103562978	103590527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103571622_103571821_103587273_103587365_103590180
transcript_3124.known	chr1	+	1552	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.861119962793	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	-15	True	NA	26	True	AATAGA	-23	NA	44213487	44220681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_31240.known	chr14	+	739	4	FSM	ENSG00000256053.9	ENST00000473127.5	739	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	238.06768411992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACTGTGGGCCGCCTGCC	-11	True	NA	-64	True	NA	NA	NA	103563189	103590440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563380_103571622_103571821_103587273_103587365_103590180
transcript_31241.known	chr14	+	575	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	218.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	-10	True	NA	0	True	NA	NA	NA	103562964	103590504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563125_103587273_103587365_103590180
transcript_31243.known	chr14	+	513	3	FSM	ENSG00000256053.9	ENST00000492189.5	513	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTTCCTAAGGGGCCCC	134	False	NA	NA	False	GGGGCT	-35	NA	103563170	103590389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103563384_103587273_103587365_103590180
transcript_31245.known	chr14	-	2567	10	FSM	ENSG00000126215.14	ENST00000555055.6	2567	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	65.7047267029634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	11	True	NA	-33	True	AATAAA	-16	NA	103715451	103697616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_31247.known	chr14	-	2563	9	FSM	ENSG00000126215.14	ENST00000352127.11	2563	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	63.1603861213657	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	NA	False	NA	-33	True	AATAAA	-16	NA	103715504	103697616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
transcript_31249.known	chr14	+	1521	8	FSM	ENSG00000100711.14	ENST00000216602.10	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	153.364179092027	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCTCGCCTTCCTGTG	0	True	NA	24	True	ATTAAA	-21	NA	103715729	103733668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103729792_103729847_103732619_103732763_103732982
transcript_31250.known	chr14	+	1383	7	FSM	ENSG00000100711.14	ENST00000311141.7	1383	7	0	0	0	0	multi-exon	TRUE	canonical	3	381	junction_5	128.859958438954	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	2	True	NA	20	True	ATTAAA	-17	NA	103715809	103733664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_31255.known	chr14	+	566	5	FSM	ENSG00000100711.14	ENST00000554630.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_4	26.6211851727154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGTTTGGTGCCATGC	23	True	NA	NA	False	NA	NA	NA	103715830	103729211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090
transcript_31261.known	chr14	-	842	5	FSM	ENSG00000156411.10	ENST00000414262.6	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2024.74381095486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTACTTATCTTGT	55	False	NA	-30	True	AATAAA	-15	NA	103921501	103912301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103920939_103921209_103921469
transcript_31262.known	chr14	-	749	5	FSM	ENSG00000156411.10	ENST00000555030.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2027.97095331763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACTTATCTTGTGG	3	True	NA	-28	True	AATAAA	-17	NA	103921520	103912299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103914478_103914634_103915065_103915190_103921469
transcript_31265.known	chr14	-	615	4	FSM	ENSG00000156411.10	ENST00000286953.8	615	4	0	0	0	0	multi-exon	TRUE	canonical	3	3952	junction_1	119.789630417476	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGCCTCTCTGAGCC	-6	True	NA	-16	True	AATAAA	-29	NA	103921529	103912287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103921469
transcript_31267.known	chr14	-	271	3	FSM	ENSG00000156411.10	ENST00000553449.1	271	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1952.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTACCTGGTACTGCTT	-15	True	NA	-14	True	AATAAA	-17	NA	103921538	103912516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103912695_103913960_103913985_103921469
transcript_31268.known	chr14	-	932	3	FSM	ENSG00000156411.10	ENST00000554089.5	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	4188	junction_2	16.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTAGCTGGGATT	12	True	NA	NA	False	NA	NA	NA	103921511	103913218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_103913985_103915065_103915190_103921469
transcript_31271.known	chr14	+	7578	22	FSM	ENSG00000203485.14	ENST00000330634.11	7578	22	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	20.6127231034984	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCTCCTGTTGCAGT	-10	True	NA	NA	False	NA	NA	NA	104689605	104722535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915_104703950_104706034_104706177_104706909_104707052_104707252_104708003_104708435_104708588_104708670_104708733_104709280_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713444_104713607_104714202_104714857_104718794
transcript_31274.known	chr14	+	752	4	FSM	ENSG00000184990.13	ENST00000329967.11	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	1385	junction_3	47.6678321535836	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGACTCTTGTCTGTC	6	True	NA	28	True	AATAAA	-17	NA	104753146	104759654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104759427
transcript_31277.known	chr14	+	550	3	FSM	ENSG00000184990.13	ENST00000347067.9	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	663	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTGTCTGTCAGCAC	18	True	NA	33	True	AATAAA	-22	NA	104753158	104759659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_104753320_104756603_104756761_104759427
transcript_31279.known	chr14	-	2830	6	FSM	ENSG00000142208.18	ENST00000553506.5	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_5	58.4650322842637	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTGGCTCACTTTGC	NA	False	NA	-5	True	AATAAA	-12	NA	104774680	104769351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454
transcript_3128.nic	chr1	+	1653	11	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.131969100652	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	NA	False	NA	18	True	AATAGA	-15	NA	44213424	44220673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_44213528_44213662_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_31280.known	chr14	+	846	3	FSM	ENSG00000099814.17	ENST00000251181.8	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACATGTGCCATATCCC	293	False	NA	NA	False	NA	NA	NA	104893933	104895059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_104894379_104894536_104894589_104894710
transcript_31281.known	chr14	-	1536	3	FSM	ENSG00000170779.11	ENST00000392590.3	1536	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	298.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGTGGTGTTAGTTA	20	True	NA	76	True	ATTAAA	-21	NA	105021060	105009935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_105010634_105011159_105011936_105020998
transcript_31282.known	chr14	-	2448	2	FSM	ENSG00000170779.11	ENST00000336219.4	2448	2	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	0	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTAGTAGTTGTAGTGC	-3	True	NA	33	True	NA	NA	NA	105021083	105009572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_105011936_105020998
transcript_31286.known	chr14	-	854	5	FSM	ENSG00000183828.15	ENST00000392568.7	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	17.6210101867061	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-18	True	NA	-6	True	AATAAA	-17	NA	105181312	105172938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_-_105173262_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_31287.known	chr14	+	1178	8	FSM	ENSG00000182809.11	ENST00000329146.9	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	4.29997626951212	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTCTCTGCTTGTGGG	0	True	NA	23	True	AATAAA	-17	NA	105474820	105480162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_31288.known	chr14	+	1311	5	FSM	ENSG00000213145.10	ENST00000330233.11	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.63145976158349	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTACATGCGCGTG	0	True	NA	25	True	AGTAAA	-20	NA	105486316	105488791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr14_+_105487300_105488165_105488261_105488330_105488389_105488470_105488517_105488662
transcript_3129.known	chr1	+	1545	11	FSM	ENSG00000178028.14	ENST00000361745.10	1545	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	118.635618597452	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	-6	True	NA	26	True	AATAGA	-23	NA	44213454	44220681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44213528_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_31291.known	chr15	+	5746	32	FSM	ENSG00000276550.5	ENST00000619021.4	5746	32	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_19	211.426786761398	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22516908	22590815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
transcript_31294.known	chr15	+	2799	6	FSM	ENSG00000170113.16	ENST00000559448.5	2799	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	57.0634734309085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAATGTGTTTTTGT	-5	True	NA	NA	False	ATTAAA	-13	NA	22786766	22826076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22813632_22813715_22820312_22820474_22823727
transcript_31296.known	chr15	+	6553	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	12.6589889011722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	2	True	NA	20	True	AATAAA	-21	NA	22786643	22829789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
transcript_31297.known	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_12	39.2561955478226	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-6	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_31298.nic	chr15	-	1629	14	ISM	ENSG00000273749.5	ENST00000617928.5	6826	31	-36	51661	-22	-2230	5prime_fragment	FALSE	canonical	3	343	junction_13	27.5165361794251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAACGTCATCCAGA	311	False	NA	NA	False	NA	NA	NA	22980404	22918712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_31299.nnic	chr15	-	1876	10	NNC	ENSG00000273749.5	novel	3471	10	NA	NA	12130	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	137.589656516204	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	NA	False	NA	-22	True	AATAAA	-14	NA	22893310	22869465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22893170
transcript_31300.nnic	chr15	-	1872	10	NNC	ENSG00000273749.5	novel	3471	10	NA	NA	12084	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	138.5018607532	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	NA	False	NA	-22	True	AATAAA	-14	NA	22893356	22869465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22893220
transcript_31302.known	chr15	-	4515	32	FSM	ENSG00000273749.5	ENST00000610365.4	4515	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	107.348257009783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	10	True	NA	-22	True	AATAAA	-14	NA	22980352	22869465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22947910_22948030_22980286
transcript_31304.known	chr15	+	3227	8	FSM	ENSG00000140157.16	ENST00000337451.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	352.118080843831	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	-25	True	NA	9	True	AATAAA	-21	NA	22838665	22868384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_31305.known	chr15	+	4076	7	FSM	ENSG00000140157.16	ENST00000674173.1	4076	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	363.805656299563	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	-32	True	NA	NA	False	NA	NA	NA	22838658	22869362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22838922_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_31306.known	chr15	+	1691	6	FSM	ENSG00000140157.16	ENST00000674330.1	1691	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	362.593767183056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATGAAGTGAATTTGA	-2	True	NA	14	True	ATTAAA	-14	NA	22838688	22866876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_22839175_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_31308.known	chr15	-	3744	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.8721649384925	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTATCCTTTTGCTGC	3	True	NA	-1	True	AATAAA	-19	NA	23039569	22999176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_31309.known	chr15	-	3342	22	FSM	ENSG00000275835.5	ENST00000620435.4	3342	22	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	14.8719401281273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGTGTAGTTTTTGTAA	0	True	NA	NA	False	AATAAA	-34	NA	23039572	23000283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_3131.nnic	chr1	+	1589	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.169321923445	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	4	True	NA	18	True	AATAGA	-15	NA	44213464	44220673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_44213550_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_31311.nic	chr15	-	2606	18	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	-68	5792	-68	-277	5prime_fragment	FALSE	canonical	3	87	junction_1	12.9320823661644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATGTTTTACTTTTT	-1	True	NA	-13	True	AATAAA	-15	NA	23039640	23006075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_31312.nic	chr15	-	1665	13	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	-68	17677	-68	-8001	5prime_fragment	FALSE	canonical	3	94	junction_7	13.3570102276753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAAAAATGAGTGATA	-1	True	NA	NA	False	NA	NA	NA	23039640	23017960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_3132.nnic	chr1	+	1618	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.65726447689	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	8	True	NA	18	True	AATAGA	-15	NA	44213468	44220673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_44213583_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_31320.nnic	chr15	+	1647	4	NNC	ENSG00000274471.2	novel	883	6	NA	NA	-5861	-2517	intron_retention	FALSE	canonical	3	33	junction_3	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATCTGTTTTTACTAGG	16	False	NA	NA	False	NA	NA	NA	23303745	23310759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_23303819_23304427_23304531_23309139_23309458_23309606
transcript_3133.nic	chr1	+	1656	11	NIC	ENSG00000178028.14	novel	1742	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.510621938483	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	10	True	NA	18	True	AATAGA	-15	NA	44213470	44220673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_44213663_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_3137.known	chr1	+	1742	10	FSM	ENSG00000178028.14	ENST00000372289.7	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.3829755422309	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	10	True	NA	18	True	AATAGA	-15	NA	44213470	44220673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_31382.known	chr15	+	1605	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	3395.95845354177	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	14	False	NA	21	True	AATAAA	-23	NA	24856550	24978582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_3139.known	chr1	-	1733	9	FSM	ENSG00000117419.16	ENST00000372257.7	1733	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_8	414.298635497391	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-16	True	NA	0	True	AATAAA	-39	NA	44355257	44221069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
transcript_31395.known	chr15	+	1763	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	3417.84548877271	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	-3	True	NA	-22	True	NA	NA	NA	24954947	24978539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_3140.nnic	chr1	-	1419	9	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_8	474.585016093007	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-1	True	NA	0	True	AATAAA	-39	NA	44355311	44221069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44355259
transcript_3142.nnic	chr1	-	1371	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_7	458.183013073802	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	0	True	AATAAA	-39	NA	44355339	44221069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44355259
transcript_31428.nic	chr15	+	1634	11	NIC	ENSG00000128739.23	novel	1763	12	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	3	948	junction_3	2641.83643702634	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	NA	False	NA	16	True	AATAAA	-18	NA	24954798	24978577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_3144.nnic	chr1	-	1141	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_6	572.339238635298	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-1	True	NA	0	True	AATAAA	-39	NA	44355311	44221069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44352849_44352926_44355259
transcript_3149.nnic	chr1	-	1101	7	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	3	238	junction_6	439.86689906026	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	0	True	AATAAA	-39	NA	44355347	44221069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
transcript_31500.known	chr15	+	1298	10	FSM	ENSG00000128739.23	ENST00000577565.1	1298	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	2424.93588053197	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAATAATAAATGCATAGA	26	False	NA	-13	True	NA	NA	NA	24955004	24978548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974287_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31505.known	chr15	+	1468	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	0	0	0	0	multi-exon	FALSE	canonical	3	7312	junction_5	229.178242131898	11012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	8	True	NA	12	True	GATAAA	-20	NA	24954986	24978723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31515.known	chr15	+	1304	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_3	2323.23831040072	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTTGTATATATTTT	NA	False	NA	22	True	AATAAA	-24	NA	24954934	24978583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31525.nnic	chr15	+	1434	10	NNC	ENSG00000128739.23	novel	1468	10	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_1	2326.00716536586	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	NA	False	NA	16	True	AATAAA	-18	NA	24954848	24978577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_24955037_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31594.known	chr15	+	1751	13	FSM	ENSG00000128739.23	ENST00000400100.5	1751	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3611.52637302506	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	-5	True	NA	21	True	AATAAA	-23	NA	24823646	24978582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24823851_24829797_24829906_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31599.nnic	chr15	+	3269	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	557	junction_1	87.2021916136414	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCCATCTCAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	24981993	25023250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
transcript_3160.nnic	chr1	-	977	6	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-87	-24	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	636.628808647551	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGGTGTGTGTGCAAA	NA	False	NA	-24	True	AATAAA	-15	NA	44355347	44221093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_44221641_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
transcript_31600.nic	chr15	+	4496	4	ISM	ENSG00000224078.15	ENST00000551631.7	17832	11	15720	34086	-5028	0	internal_fragment	FALSE	canonical	3	596	junction_1	173.93549251247	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	3828	False	NA	38	True	AATATA	-20	NA	24995276	25002404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_24998487_24998969_24999079_25000244_25000375_25001357
transcript_31601.nnic	chr15	+	1009	7	NIC	ENSG00000128739.23	novel	1468	10	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	2	279	junction_4	2766.67554215444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	NA	False	NA	16	True	AATAAA	-18	NA	24954882	24978577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24977777_24977917_24978192_24978319_24978406
transcript_31603.nnic	chr15	+	770	6	NIC	ENSG00000128739.23	novel	1304	10	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	3140.36256505519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	-1	True	NA	16	True	AATAAA	-18	NA	24954977	24978577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_24955063_24962113_24962210_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_31604.nnic	chr15	+	521	5	NIC	ENSG00000273173.5	novel	331	4	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	3006.57550212863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	-3	True	NA	15	True	AATAAA	-23	NA	24954947	24968829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24968794
transcript_31608.known	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	3592.03436632904	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	35	False	NA	15	True	AATAAA	-23	NA	24955013	24968829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
transcript_31610.known	chr15	+	650	3	FSM	ENSG00000273173.5	ENST00000577949.5	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	7621	junction_1	42.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTTTCTGCCAGTAG	7	True	NA	NA	False	NA	NA	NA	24954985	24968408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_24955063_24962113_24962210_24967931
transcript_31612.nic	chr15	+	1565	2	ISM	ENSG00000273173.5	ENST00000577949.5	650	3	1	4806	1	-4806	5prime_fragment	FALSE	canonical	3	7621	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTCCATCTCAGGAAAAA	8	True	NA	NA	False	NA	NA	NA	24954986	24963602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_24955063_24962113
transcript_31614.known	chr15	-	5274	14	FSM	ENSG00000114062.22	ENST00000650110.1	5274	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	179.650317802086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-10	True	NA	-19	True	AATAAA	-13	NA	25439024	25337246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25408619_25408685_25409087_25409208_25411907_25411972_25438488
transcript_31615.known	chr15	-	8728	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_10	131.316702627232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-10	True	NA	1	True	CATAAA	-21	NA	25439024	25333727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_31616.known	chr15	-	5025	11	FSM	ENSG00000114062.22	ENST00000649550.1	5025	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_10	90.6242793074792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-10	True	NA	-19	True	AATAAA	-13	NA	25439024	25337246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
transcript_31617.known	chr15	-	4494	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	277.794635252375	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	7397	False	NA	-7	True	AATAAA	-13	NA	26773788	26544784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
transcript_31625.known	chr15	+	2553	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	42.8113302759912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	-13	True	NA	17	True	AATAAA	-21	NA	26867061	26949208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_31626.known	chr15	+	2183	10	FSM	ENSG00000186297.12	ENST00000355395.9	2183	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	50.7849496515563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAAGTACTGCATGATC	194	False	NA	NA	False	AATGAA	-32	NA	26866910	26948752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_26867112_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_31627.nic	chr15	+	2333	9	NIC	ENSG00000186297.12	novel	2553	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	54.6345815395341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	-19	True	NA	16	True	AATAAA	-20	NA	26867055	26949207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_26867112_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_31630.known	chr15	-	15364	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_70	52.0765486444192	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGCTGAGCTTTCTTA	-1	False	NA	NA	False	AATAAA	-16	NA	28322179	28111039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_31631.known	chr15	-	491	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_1	54	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGGATGATGGGAT	59	False	NA	NA	False	NA	NA	NA	28322119	28320121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_28320465_28321361_28321465_28322074
transcript_31632.known	chr15	+	409	1	FSM	ENSG00000256338.2	ENST00000544920.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTATCT	-1	True	NA	17	True	AATAAA	-19	NA	28315650	28316059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_28315600_28316100
transcript_31633.known	chr15	+	480	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	5	49	-5	multi-exon	FALSE	canonical	3	40	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTATGTGTACAGTT	62	False	NA	30	True	AATATA	-26	NA	28832379	28838983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_28832461_28833275_28833379_28838687
transcript_31636.known	chr15	+	1451	1	FSM	ENSG00000259523.1	ENST00000557989.1	1451	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1052	False	NA	NA	False	NA	NA	NA	29822630	29824081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_29822600_29824100
transcript_31641.known	chr15	+	3256	11	FSM	ENSG00000285077.3	ENST00000428041.4	3256	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	74.4170007457973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTGAATATCTGATC	198	False	NA	NA	False	AATAAA	-25	NA	30625965	30649529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30648303
transcript_31646.nic	chr15	+	1478	6	NIC	ENSG00000285077.3	novel	589	5	NA	NA	116	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	89.3115893935384	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAGAAAAGAAATTG	314	False	NA	NA	False	NA	NA	NA	30626081	30635387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635308
transcript_31648.nic	chr15	+	2182	5	ISM	ENSG00000285077.3	ENST00000689358.1	2164	8	-271	4405	-271	0	5prime_fragment	TRUE	canonical	3	70	junction_4	76.9654955158479	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	30625495	30635385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079
transcript_31649.nic	chr15	+	2218	4	ISM	ENSG00000285077.3	ENST00000689358.1	2164	8	359	4395	160	8	intron_retention	FALSE	canonical	3	115	junction_2	71.4624998785299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATTGGTATATTA	-5	True	NA	NA	False	AAGAAA	-5	NA	30626125	30635395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169
transcript_31651.known	chr15	+	4849	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	30.3342771027585	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTCATGAATGCCTT	9	True	NA	NA	False	AATAAA	-25	NA	30903914	30943108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_31654.known	chr15	+	2738	4	FSM	ENSG00000198690.10	ENST00000561594.5	2738	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	89.1640186522693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACACCTGTA	-9	True	NA	NA	False	ATTAAA	-22	NA	30903851	30911788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30903888_30904511_30905898_30908117_30908259_30910613
transcript_31655.known	chr15	+	2157	4	FSM	ENSG00000198690.10	ENST00000658773.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	88.6954840388669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGTAACAATTTACCAAAA	3	True	NA	NA	False	NA	NA	NA	30903863	30911212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613
transcript_31658.known	chr15	+	2304	4	FSM	ENSG00000198690.10	ENST00000565466.5	2304	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	44.9221548904324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTCAGTTGAAAATTAC	-13	True	NA	NA	False	NA	NA	NA	30903892	30911271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613
transcript_31659.known	chr15	+	2687	4	FSM	ENSG00000198690.10	ENST00000561607.6	2687	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	76.5259578327656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTATAGAATCCTCATCT	-14	True	NA	16	True	AATAAA	-28	NA	30903891	30911640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30910613
transcript_3166.known	chr1	+	916	10	FSM	ENSG00000187147.18	ENST00000475378.5	916	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_2	66.9766865648778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTGCCCCCAGCCT	290	False	NA	NA	False	NA	NA	NA	44632254	44650808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_31665.known	chr15	-	875	4	FSM	ENSG00000261279.5	ENST00000564495.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAACACAAAACTCT	NA	False	NA	NA	False	AAAAAG	-17	NA	32434637	32406596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_32407218_32410581_32410661_32428190_32428316_32434587
transcript_31666.known	chr15	-	623	3	FSM	ENSG00000261279.5	ENST00000565207.1	623	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTATGTGAATTGTAAA	NA	False	NA	NA	False	ACTAAA	-38	NA	32434884	32424507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_32424709_32428190_32428316_32434587
transcript_31667.known	chr15	+	3152	13	FSM	ENSG00000198826.11	ENST00000543522.5	3152	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	130.338315122181	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGATGTACATGTTAGT	16	False	NA	11	True	AATAAA	-23	NA	32615570	32637903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32615608_32615804_32615919_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_3167.nic	chr1	+	1922	10	NIC	ENSG00000187147.18	novel	3099	15	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	3	276	junction_2	94.1960131262937	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	277	False	NA	NA	False	ATTAAA	-16	NA	44632241	44651723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_31674.known	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_11	42.6040777158305	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	-11	True	NA	11	True	AATAAA	-14	NA	32615503	32639941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_3168.known	chr1	-	1579	4	FSM	ENSG00000126106.14	ENST00000372243.7	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	56.1921307262463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-9	True	NA	-4	True	AATAAA	-20	NA	44674462	44635237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44636458_44645359_44645465_44660173_44660296_44674330
transcript_31680.nic	chr15	+	2274	12	NIC	ENSG00000198826.11	novel	2422	11	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	103.085858462138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	20	False	NA	4	True	ATTAAA	-15	NA	32615489	32636181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_32615608_32615804_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_31681.nic	chr15	+	2415	11	NIC	ENSG00000198826.11	novel	2422	11	NA	NA	-45	0	intron_retention	FALSE	canonical	3	43	junction_8	106.149705604867	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	314	False	NA	4	True	ATTAAA	-15	NA	32615458	32636181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629676_32632978_32633109_32633932_32634042_32635776
transcript_31682.known	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	39.188773902739	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	24	False	NA	4	True	ATTAAA	-15	NA	32615538	32636181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_31684.nic	chr15	+	2071	9	ISM	ENSG00000198826.11	ENST00000567348.5	2422	11	-80	2990	-45	-2957	5prime_fragment	TRUE	canonical	3	317	junction_7	36.3386846212132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCATATTTGAGTCATAA	314	False	NA	7	True	AATAAA	-21	NA	32615458	32633191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978
transcript_31688.known	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	31	junction_3	21.3766227454198	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	-38	True	NA	12	True	AATAAA	-21	NA	32641675	32697098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
transcript_3169.known	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-24	True	NA	-4	True	AATAAA	-20	NA	44674477	44635237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44636458_44645359_44645465_44674330
transcript_31690.known	chr15	+	1235	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	11.5308282443197	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	-38	True	NA	12	True	AATAAA	-21	NA	32641675	32697098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
transcript_31692.nic	chr15	+	1197	5	ISM	ENSG00000166922.9	ENST00000300175.9	1198	6	-33	4784	1	0	5prime_fragment	FALSE	canonical	3	31	junction_3	23.832750575626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGTCTGTTGAATT	-37	True	NA	19	True	NA	NA	NA	32641676	32692308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709
transcript_31693.known	chr15	+	949	5	FSM	ENSG00000166922.9	ENST00000497208.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.9330975564312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGATTTCTTGCA	-12	True	NA	12	True	AATAAA	-14	NA	32641701	32696889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32696513
transcript_31694.nic	chr15	+	1156	5	ISM	ENSG00000166922.9	ENST00000413748.6	1235	6	39	4790	5	0	5prime_fragment	FALSE	canonical	3	58	junction_3	12.8330627677106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGTCTGTTGAATT	1	True	NA	19	True	NA	NA	NA	32641714	32692308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709
transcript_31695.known	chr15	+	1148	5	FSM	ENSG00000166922.9	ENST00000494364.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.3729544845944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGCATATGGAGTTT	-15	True	NA	2	True	AATAAA	-11	NA	32641698	32697088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32696513
transcript_31699.known	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	29.8202951024969	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	1	True	NA	0	True	ATTAAA	-23	NA	34101862	34084016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
transcript_3170.known	chr1	-	415	3	FSM	ENSG00000126106.14	ENST00000420706.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	62.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATGCTGCGCCTGTTGC	162	False	NA	NA	False	GGGGCT	-36	NA	44674402	44654895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44655117_44660173_44660296_44674330
transcript_31700.known	chr15	-	581	4	FSM	ENSG00000134153.10	ENST00000527822.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	306.933579495992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCCAGAGCTGGCATTT	116	False	NA	NA	False	AGTAAA	-38	NA	34101807	34084329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34101603
transcript_31704.nic	chr15	-	1782	11	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	0	151	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	140.7840900102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	5	True	NA	-1	True	ATTAAA	-20	NA	34210096	34141810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
transcript_31705.nic	chr15	-	1696	11	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	0	65	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	140.7840900102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCAGCTATTTTCTTA	5	True	NA	-11	True	ATTAAA	-18	NA	34210096	34141896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
transcript_31707.known	chr15	-	2740	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	42.5858609817338	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTAGTTATCACTGTC	5	True	NA	-7	True	GATAAA	-23	NA	34210096	34140673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_3171.known	chr1	-	2236	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	23.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-28	True	NA	NA	False	AATAAA	-17	NA	44674481	44653246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44655210_44660173_44660296_44674330
transcript_31710.nnic	chr15	-	1526	10	NNC	ENSG00000134152.11	novel	2740	10	NA	NA	-19	151	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	109.368896655107	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-14	True	NA	-1	True	ATTAAA	-20	NA	34210115	34141810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34152974_34154643_34154685_34163559_34163691_34209950
transcript_31714.nic	chr15	-	1350	10	NIC	ENSG00000134152.11	novel	733	6	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	111.969021288904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTGGTCTTTATTG	-14	True	NA	2	True	TTTAAA	-11	NA	34210115	34144963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34145253_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_31724.nnic	chr15	-	1532	9	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	-19	151	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	126.316814003521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-14	True	NA	-1	True	ATTAAA	-20	NA	34210115	34141810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_31739.nic	chr15	-	1305	7	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	-19	65	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	146.013697987552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCAGCTATTTTCTTA	-14	True	NA	-11	True	ATTAAA	-18	NA	34210115	34141896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34142372_34145397_34145492_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_3174.known	chr1	-	2075	2	FSM	ENSG00000126106.14	ENST00000476724.1	2075	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	11	True	NA	NA	False	AATAAA	-17	NA	44674442	44653246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44655210_44674330
transcript_31742.known	chr15	-	924	5	FSM	ENSG00000134152.11	ENST00000560671.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	27.105119442644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGAGCTC	40	False	NA	NA	False	TTTAAA	-42	NA	34210061	34148389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_31743.nic	chr15	-	475	4	ISM	ENSG00000134152.11	ENST00000560671.5	924	5	-54	4542	-19	73	5prime_fragment	FALSE	canonical	3	386	junction_3	9.46337971105226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAAATGAACTGGCTT	-14	True	NA	NA	False	AAAACA	-34	NA	34210115	34152931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_34153070_34154643_34154685_34163559_34163691_34209950
transcript_31744.known	chr15	-	1553	1	FSM	ENSG00000134152.11	ENST00000560915.1	1553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGAGTGGTTATTCTG	4	True	NA	NA	False	AATAAA	-33	NA	34210069	34208516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34208500_34210100
transcript_31746.known	chr15	+	1006	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	528.880598528628	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	17	True	NA	26	True	AATAAA	-31	NA	34225036	34230156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
transcript_31749.known	chr15	+	852	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	550.97872513878	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	-7	True	NA	17	True	AATAAA	-22	NA	34225012	34230147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
transcript_31754.known	chr15	-	436	2	FSM	ENSG00000182117.6	ENST00000557912.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	17	True	NA	-6	True	ATTAAA	-20	NA	34343123	34341718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34342051_34343019
transcript_31755.known	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	5576	junction_1	0	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	4	True	NA	-6	True	ATTAAA	-20	NA	34343136	34341718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34342109_34343019
transcript_31759.nnic	chr15	-	1956	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	48.2459684262608	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-26	True	NA	NA	False	ATTAAA	-15	NA	34367202	34358908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361168_34361230_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_3176.known	chr1	-	117	1	FSM	ENSG00000199377.1	ENST00000362507.1	117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTCTGTTACTAAAGA	0	True	NA	-4	True	NA	NA	NA	44721902	44721785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44721800_44721900
transcript_31763.known	chr15	-	2165	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	22.8151823218378	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTACCATTCCATATT	-20	True	NA	NA	False	ATTAAA	-13	NA	34367196	34358632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_31766.nic	chr15	-	1762	13	NIC	ENSG00000176454.15	novel	2165	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	41.6549983662092	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-26	True	NA	NA	False	ATTAAA	-15	NA	34367202	34358908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_34359303_34359588_34359746_34360110_34360210_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_3177.known	chr1	-	116	1	FSM	ENSG00000200169.1	ENST00000363299.1	116	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAACGGTGTTTAAAAAT	0	True	NA	NA	False	NA	NA	NA	44731170	44731054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44731100_44731200
transcript_31776.nic	chr15	-	4257	16	ISM	ENSG00000175265.18	ENST00000359187.5	5777	25	48015	0	-2413	0	3prime_fragment	FALSE	canonical	3	18	junction_14	59.5223207432864	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTTTTGCCTTAAAA	NA	False	NA	-16	True	AATAAA	-19	NA	34389793	34379067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_34381614_34381700_34381857_34381967_34382069_34382150_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34386742_34387832_34387953_34389643
transcript_31778.nic	chr15	-	1347	8	ISM	ENSG00000215252.12	ENST00000484716.5	6114	23	-12	11511	-12	7693	5prime_fragment	FALSE	canonical	3	43	junction_7	27.0653027369896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTTAATGGGCTTGT	4	True	NA	NA	False	ATTAAA	-24	NA	34582872	34537164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34582749
transcript_31779.known	chr15	-	6114	23	FSM	ENSG00000215252.12	ENST00000484716.5	6114	23	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_22	45.8300174107295	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGCTAATAGTGGTA	1	True	NA	NA	False	AATAAA	-20	NA	34582860	34525653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34582749
transcript_3178.known	chr1	+	2862	21	FSM	ENSG00000142945.13	ENST00000372224.9	2862	21	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	61.6200251541656	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGATGTGTCTGAG	-18	True	NA	29	True	AATAAA	-37	NA	44739836	44767767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753131_44753255_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
transcript_31781.known	chr15	-	1382	7	FSM	ENSG00000159251.8	ENST00000290378.6	1382	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	41.4919670940452	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCCTCTCGTTTGTTT	-1	True	NA	NA	False	AATAAA	-23	NA	34795549	34790229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34790556_34791113_34791296_34792089_34792282_34792407_34792570_34793244_34793570_34794679_34794831_34795505
transcript_31783.known	chr15	-	9597	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	0	0	0	multi-exon	TRUE	canonical	3	266	junction_23	38.1324068192265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGGCTTTCTGTTCT	-14	True	NA	-4	True	AGTAAA	-21	NA	34969742	34851781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
transcript_31787.nnic	chr15	-	578	3	NNC	ENSG00000021776.11	novel	9597	35	NA	NA	0	-15532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTACGTGTATAATT	-14	True	NA	NA	False	AAAAAG	-8	NA	34969742	34963665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_34963983_34964233_34964291_34969538
transcript_31788.known	chr15	-	5439	3	FSM	ENSG00000198146.4	ENST00000356321.4	5439	3	0	0	0	0	multi-exon	FALSE	canonical	3	1186	junction_1	17.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-17	True	NA	-3	True	AATAAA	-16	NA	34988287	34978340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34983491_34987556_34987674_34988115
transcript_31789.known	chr15	-	563	2	FSM	ENSG00000198146.4	ENST00000559564.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCACAGAGGAAAGATGG	459	False	NA	NA	False	AAGAAA	-28	NA	34988225	34983037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_34983491_34988115
transcript_31792.known	chr15	-	2098	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_1	44.7267746992783	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTGAAGATA	7	True	NA	-4	True	AATAAA	-22	NA	35546165	35370879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
transcript_31797.known	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	15.0173453432031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	57	False	NA	1	True	AATAAA	-16	NA	36579843	36810244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
transcript_31799.known	chr15	+	2872	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	6.28410693734599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	-13	True	NA	1	True	AATAAA	-16	NA	36579625	36810244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_318.known	chr1	+	1747	3	FSM	ENSG00000224870.8	ENST00000444362.3	1759	3	12	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	80	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTCTTTTCCTAATC	3	True	NA	19	True	TATAAA	-20	NA	1399526	1402046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399686_1400157_1400304_1400604
transcript_31800.known	chr15	-	3056	13	FSM	ENSG00000134138.20	ENST00000340545.9	3056	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.53432938662683	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTTGCGTTTTTAATG	-12	True	NA	-1	True	AATAAA	-24	NA	37101299	36891021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_36892460_36894716_36894813_36895150_36895241_36896627_36896687_36950323_36950401_37036813_37036960_37083770_37083886_37093580_37093731_37094526_37094578_37095563_37095615_37096288_37096431_37097966_37098200_37100891
transcript_31803.known	chr15	+	3111	7	FSM	ENSG00000171262.11	ENST00000491535.5	3111	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.7950549357115	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7	True	NA	NA	False	NA	NA	NA	38454153	38483665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291
transcript_31804.known	chr15	-	789	2	FSM	ENSG00000259345.7	ENST00000558277.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCAGCAATCCCGTTAC	7180	False	NA	NA	False	AATGAA	-17	NA	39420709	39419029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_39419653_39420543
transcript_31805.known	chr15	-	2816	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	3.3153786416019	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTTGCTGGCACAT	-15	True	NA	NA	False	AATAAA	-22	NA	39782841	39600030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
transcript_31809.nic	chr15	+	609	5	ISM	ENSG00000128829.12	ENST00000559624.5	3548	11	15	21465	15	7069	5prime_fragment	TRUE	canonical	3	437	junction_4	32.6525267016199	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATGGCTAAGCAG	16	True	NA	41	True	GATAAA	-15	NA	39934160	39953964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903
transcript_31810.known	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	6703	junction_4	794.831546618527	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-11	True	NA	45	True	NA	NA	NA	40039181	40035689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
transcript_31813.known	chr15	+	669	4	FSM	ENSG00000248508.9	ENST00000560341.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.4571575998762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCCTCCTAATTTT	44	True	NA	NA	False	TATAAA	-23	NA	40039348	40057000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40056452_40056642_40056729
transcript_31814.known	chr15	+	1058	4	FSM	ENSG00000248508.9	ENST00000667323.1	1058	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.8884444373331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	-14	True	NA	NA	False	ATTAAA	-19	NA	40039290	40065705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40064295_40064602_40065220
transcript_31815.known	chr15	+	879	4	FSM	ENSG00000248508.9	ENST00000668306.2	942	4	60	3	0	0	multi-exon	FALSE	canonical	3	7	junction_2	14.8398861930347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	0	True	NA	NA	False	ATTAAA	-19	NA	40039304	40065705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40064460_40064602_40065220
transcript_31817.known	chr15	+	568	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	45	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	0	True	NA	NA	False	TATAAA	-26	NA	40039304	40057003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40056688
transcript_31818.known	chr15	+	2538	3	FSM	ENSG00000248508.9	ENST00000504245.7	2560	3	22	0	5	0	multi-exon	FALSE	canonical	3	15	junction_2	13.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATGTTTAATAGTT	-9	True	NA	-11	True	AATAAA	-6	NA	40039295	40067496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40039449_40045960_40046070_40065220
transcript_31819.nnic	chr15	+	3769	23	NNC	ENSG00000156970.13	novel	3669	23	NA	NA	-39	0	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_12	155.73998913213	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	NA	False	NA	15	True	AATAAA	-16	NA	40160983	40221123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202389_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_31821.known	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_5	70.7227154409306	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	15	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_31831.nic	chr15	+	3866	22	NIC	ENSG00000156970.13	novel	3669	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	565	junction_5	70.9410345673611	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	-11	True	NA	15	True	AATAAA	-16	NA	40161042	40221123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_31845.known	chr15	-	442	1	FSM	ENSG00000273855.1	ENST00000622487.1	442	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGCTCTTTCCCTGAC	5404	False	NA	NA	False	AATAAA	-15	NA	40285909	40285467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40285500_40285900
transcript_31846.known	chr15	-	1763	8	FSM	ENSG00000137841.12	ENST00000543785.3	1763	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.81395937194174	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCGATGTCAGGCTG	29	False	NA	NA	False	AGTAAA	-17	NA	40307910	40300666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40301610_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
transcript_3185.known	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	4302.76963826789	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	7	True	NA	52	True	AATATA	-21	NA	44775572	44778779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
transcript_31850.known	chr15	+	1388	9	FSM	ENSG00000128944.14	ENST00000561169.5	1388	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	156.330379325325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAACAATACACCTTG	8	True	NA	32	True	AATAAA	-32	NA	40382978	40394160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389488_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_31852.known	chr15	+	1899	9	FSM	ENSG00000128944.14	ENST00000416151.6	1899	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	151.70031105769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCTACATGAAACAATAC	-7	True	NA	26	True	AATAAA	-26	NA	40382720	40394154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393192
transcript_31853.known	chr15	+	1495	9	FSM	ENSG00000128944.14	ENST00000608100.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	29.5906974402429	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTGTAACATTGAGGA	-30	True	NA	16	True	AATAAA	-16	NA	40382940	40394246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_31858.known	chr15	+	1598	9	FSM	ENSG00000128944.14	ENST00000560981.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	142.18298069741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	-7	True	NA	44	True	AATAAA	-44	NA	40382720	40394172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386404_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_31860.known	chr15	+	1464	8	FSM	ENSG00000128944.14	ENST00000448395.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	158.649530315686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	68	False	NA	44	True	AATAAA	-44	NA	40382835	40394172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391948_40392024_40393468
transcript_31865.known	chr15	+	664	7	FSM	ENSG00000128944.14	ENST00000559304.5	664	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	175.793834426075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTCTTGGGCATAAAA	9	True	NA	NA	False	NA	NA	NA	40382979	40393618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40389488_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_31868.known	chr15	+	665	3	FSM	ENSG00000128944.14	ENST00000559591.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGTCAATGAAGAGTG	-30	True	NA	NA	False	AATACA	-15	NA	40382940	40384922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40383045_40383227_40383323_40384456
transcript_31874.known	chr15	+	4350	12	FSM	ENSG00000128928.10	ENST00000487418.8	4350	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	46.5507809452384	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGCCTGAGTGGTAA	-15	True	NA	10	True	AATAAA	-36	NA	40405794	40421308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_31875.nic	chr15	+	1714	12	NIC	ENSG00000128928.10	novel	4665	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	113.649235634608	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTACTTGTCTCTC	6449	False	NA	11	True	CATAAA	-14	NA	40405782	40435947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40435416
transcript_31886.known	chr15	+	4665	12	FSM	ENSG00000128928.10	ENST00000651168.1	4665	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	46.5507809452384	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGAGTGGTAAATGGA	6151	False	NA	15	True	AATAAA	-41	NA	40405484	40421313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_31888.known	chr15	+	2175	1	FSM	ENSG00000169105.8	ENST00000306243.7	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCATTTCTGTGATTT	-19	True	NA	23	True	AATAAA	-17	NA	40470983	40473158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40471000_40473200
transcript_31889.nnic	chr15	-	1473	5	NNC	ENSG00000128891.16	novel	1509	4	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.7487373415292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTGTGGTGCTG	-22	True	NA	-4	True	TATAAA	-17	NA	40565044	40553098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_40553906_40553943_40554128_40557215_40557373_40562771_40563028_40564975
transcript_31892.known	chr15	-	814	4	FSM	ENSG00000128891.16	ENST00000558750.5	814	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.5497436689865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	135	False	NA	NA	False	AGTAAA	-29	NA	40564980	40553941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564765
transcript_31893.known	chr15	-	557	4	FSM	ENSG00000128891.16	ENST00000559103.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	26.0895892391327	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGCCAGCAGCCGGG	8	True	NA	NA	False	NA	NA	NA	40565014	40554017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40554128_40557215_40557373_40562771_40563023_40564975
transcript_31894.known	chr15	-	349	3	FSM	ENSG00000128891.16	ENST00000558918.1	349	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGTAAATTACACACAC	3	True	NA	NA	False	NA	NA	NA	40565019	40553979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40554128_40557215_40557373_40564975
transcript_31896.known	chr15	-	1075	3	FSM	ENSG00000128891.16	ENST00000558871.1	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATCTGCCTGCCTCGGC	-20	True	NA	NA	False	NA	NA	NA	40565042	40556620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40557373_40562771_40563028_40564975
transcript_31897.known	chr15	+	2365	3	FSM	ENSG00000166133.18	ENST00000315616.12	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGTCTCTGTTTCCCTT	-22	True	NA	14	True	TATAAA	-21	NA	40569298	40574949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40569944_40571603_40571901_40573526
transcript_31898.known	chr15	+	1558	3	FSM	ENSG00000166133.18	ENST00000559271.1	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	83.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACGGGCTTCTAA	11	True	NA	-67	True	NA	NA	NA	40569331	40574358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40569761_40571603_40571901_40573526
transcript_3190.known	chr1	+	778	6	FSM	ENSG00000142937.12	ENST00000396651.8	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	7586	junction_1	1650.31177660465	9813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	-26	True	NA	52	True	AATATA	-21	NA	44775539	44778779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_31900.known	chr15	+	5923	10	FSM	ENSG00000137812.21	ENST00000533001.1	5923	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	3.02254900194121	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTTATTTTGCCAA	-4	True	NA	NA	False	NA	NA	NA	40594264	40626042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40611477_40611512_40615340_40615379_40618958_40619012_40620639
transcript_31908.known	chr15	+	2436	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	41.7854602865402	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	-2	True	NA	14	True	AATAAA	-15	NA	40695173	40732340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_31909.nic	chr15	+	1606	10	NIC	ENSG00000051180.17	novel	2436	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	121.691778230449	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTGCACAGATTCTT	-22	True	NA	17	True	AATAAA	-26	NA	40695153	40731594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_40695322_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_31910.known	chr15	+	1611	9	FSM	ENSG00000051180.17	ENST00000423169.6	1611	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	122.195284278895	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTCTGCACAGATTC	NA	False	NA	15	True	AATAAA	-24	NA	40695128	40731592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40731054
transcript_31912.known	chr15	+	1545	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_5	129.069688056491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAAAATAAAATGCCTCA	11	True	NA	-20	True	ACTAAA	-39	NA	40695186	40731557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_31913.nic	chr15	+	1572	9	NIC	ENSG00000051180.17	novel	2436	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	133.076516993044	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTGCACAGATTCTT	-2	True	NA	17	True	AATAAA	-26	NA	40695173	40731594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_40695426_40698756_40698846_40701063_40701202_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_31917.known	chr15	-	1242	4	FSM	ENSG00000245849.8	ENST00000650326.1	1242	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGTTTTATGGCTCA	5	True	NA	-84	True	AATAAA	-4	NA	40695093	40686242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40687147_40687798_40687845_40694585_40694796_40695011
transcript_31919.known	chr15	-	718	3	FSM	ENSG00000245849.8	ENST00000533146.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTGGACGGAACAGAG	2	True	NA	NA	False	NA	NA	NA	40695096	40686723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40687147_40694585_40694796_40695011
transcript_31920.known	chr15	-	1151	2	FSM	ENSG00000245849.8	ENST00000499988.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGCTGGGCGTGGTG	-9	True	NA	NA	False	NA	NA	NA	40695107	40693740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40694796_40695011
transcript_31921.known	chr15	-	2246	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	17.095117886565	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-12	True	NA	-16	True	AATAAA	-16	NA	40755254	40735886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_31922.nic	chr15	-	2186	13	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	26	0	intron_retention	TRUE	canonical	3	31	junction_12	39.3032194044655	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	NA	False	NA	-16	True	AATAAA	-16	NA	40755310	40735886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
transcript_31926.nnic	chr15	-	1813	10	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_6	52.4171303636088	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	NA	False	NA	-16	True	AATAAA	-16	NA	40755268	40735886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_31928.nic	chr15	-	1925	4	ISM	ENSG00000137824.16	ENST00000338376.8	2246	13	-14	14331	-14	-6124	5prime_fragment	FALSE	canonical	3	124	junction_1	11.8415464455544	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACGAGCTGGGCATG	NA	False	NA	NA	False	AAGAAA	-14	NA	40755268	40750217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_40751570_40751985_40752179_40754596_40754791_40755082
transcript_31933.known	chr15	+	2775	11	FSM	ENSG00000166140.17	ENST00000355341.8	2775	11	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	18.52160900138	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCATCACTTTTGGT	8	True	NA	NA	False	TATAAA	-22	NA	40807088	40815084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_31937.known	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_6	13.6091880727691	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-6	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_31938.nic	chr15	-	1125	11	NIC	ENSG00000104129.10	novel	3721	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	69.0988422478988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTACCTCTATCCCA	-13	True	NA	-3	True	AATAAA	-15	NA	40807480	40767872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776402_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_31941.known	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	24.2904238612261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	509	False	NA	28	True	AATAAA	-19	NA	40807589	40814569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_31947.nic	chr15	-	1590	10	ISM	ENSG00000104129.10	ENST00000220496.9	3721	11	-7	7802	-2	819	5prime_fragment	FALSE	canonical	3	205	junction_5	14.2984070596848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGAACTCTGGCTAC	-13	True	NA	NA	False	NA	NA	NA	40807480	40772962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_31956.known	chr15	+	727	3	FSM	ENSG00000137880.6	ENST00000260447.6	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	20	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	-16	True	NA	16	True	AATAAA	-16	NA	40764067	40767708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40764217_40765826_40765922_40767225
transcript_31958.known	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	55.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	3	True	NA	-1	True	AATAAA	-24	NA	40844387	40835992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40836283_40838542_40838687_40844178
transcript_31960.known	chr15	-	629	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACAAAAATGTTCAGC	-5	True	NA	NA	False	TATAAA	-38	NA	40844332	40835807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40836283_40844178
transcript_31961.known	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	158	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	90	False	NA	73	True	AATAAA	-19	NA	40844300	40838338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_40838687_40844178
transcript_31963.nnic	chr15	+	2072	5	NNC	ENSG00000104142.11	novel	3875	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	77.6095999216592	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	-17	True	NA	15	True	ATTAAA	-15	NA	40894446	40903975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40899209_40902615
transcript_31964.known	chr15	+	3875	5	FSM	ENSG00000104142.11	ENST00000220509.10	3875	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	13.7363568678162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	-14	True	NA	15	True	ATTAAA	-15	NA	40894449	40903975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40901015_40902615
transcript_31965.nic	chr15	+	1319	2	ISM	ENSG00000104142.11	ENST00000558855.5	1050	5	-5	2554	-3	-2554	5prime_fragment	FALSE	canonical	3	182	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTTTAGGAGTGTAGAC	-17	True	NA	NA	False	AAAAAG	-19	NA	40894446	40896843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_40894860_40895937
transcript_31966.known	chr15	+	1204	4	FSM	ENSG00000128965.13	ENST00000444189.7	1204	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	207.895807236862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTCCAGTGCACAAGA	NA	False	NA	NA	False	GGGGCT	-43	NA	40952961	40955822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40953815_40954227_40954264_40955372_40955415_40955549
transcript_31967.known	chr15	+	1520	3	FSM	ENSG00000128965.13	ENST00000617768.5	1520	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	2	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTGTGCCGGAATGT	-2	True	NA	12	True	CATAAA	-13	NA	40953470	40956512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_40953815_40954227_40954264_40955372
transcript_31968.known	chr15	+	3201	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	2.3629078131263	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTCCATTTTACA	-8	True	NA	NA	False	AATAAA	-21	NA	41231267	41281887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
transcript_31970.nic	chr15	+	750	2	ISM	ENSG00000187446.12	ENST00000560784.5	717	7	24	34628	7	-18654	5prime_fragment	FALSE	canonical	3	88	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCGGAACTATGACAATT	-30	True	NA	NA	False	NA	NA	NA	41231245	41244212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_41231450_41243666
transcript_31979.known	chr15	+	473	5	FSM	ENSG00000247556.6	ENST00000560706.5	473	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	482.514442789022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTTCTTTTACCCA	9	True	NA	NA	False	NA	NA	NA	41284007	41298069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41290304_41290417_41298040
transcript_31992.nnic	chr15	+	1509	5	NNC	ENSG00000247556.6	novel	473	5	NA	NA	-28	847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	401.171643439563	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGTATTGGAACATC	-3	True	NA	23	True	AATAAA	-27	NA	41283961	41299628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040_41298782_41299238
transcript_31993.known	chr15	+	1384	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	466.77778438996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	33	False	NA	NA	False	AATAAA	-18	NA	41284031	41309737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
transcript_31999.known	chr15	-	1201	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_2	23.8012604708238	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-14	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
transcript_32.known	ERCC-00084	+	978	1	FSM	ERCC-00084A	DQ883682	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00084_+_0_1000
transcript_320.known	chr1	+	1748	3	FSM	ENSG00000224870.8	ENST00000448629.7	1759	3	1	10	1	0	multi-exon	FALSE	canonical	3	71	junction_1	44.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAATTACTCTGTCTCT	-4	True	NA	9	True	TATAAA	-10	NA	1399519	1402036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399690_1400157_1400304_1400604
transcript_32001.nnic	chr15	+	1140	4	NNC	ENSG00000247556.6	novel	8829	4	NA	NA	-28	3203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	458.337818159876	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTGAA	-3	True	NA	NA	False	NA	NA	NA	41283961	41301984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_41284111_41285224_41285364_41286010_41286065_41301186
transcript_32002.known	chr15	+	642	4	FSM	ENSG00000247556.6	ENST00000559368.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	454.569637740529	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAATAGGCTTCATACC	9	True	NA	NA	False	NA	NA	NA	41284007	41288271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287961
transcript_32003.known	chr15	+	1482	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	455.511678103744	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	32	False	NA	16	True	AATAAA	-18	NA	41284030	41289155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
transcript_32004.known	chr15	+	8829	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_3	91.2006335260647	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	6	True	NA	36	True	AATAAA	-28	NA	41284004	41306534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
transcript_32011.known	chr15	-	485	4	FSM	ENSG00000104147.9	ENST00000560640.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	208.864123827483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGATCCTGTACCAAA	90	False	NA	NA	False	AATGAA	-39	NA	41332487	41309761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41309850_41313272_41313355_41331914_41331982_41332239
transcript_32013.known	chr15	+	676	3	FSM	ENSG00000247556.6	ENST00000558457.5	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_1	22.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAGGTGGGCAGATAC	-9	True	NA	NA	False	NA	NA	NA	41283989	41286426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41284111_41285224_41285364_41286010
transcript_32014.known	chr15	+	2256	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	659.193567929785	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	9	True	NA	25	True	AATAAA	-22	NA	41332885	41381050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_32016.known	chr15	+	5021	18	FSM	ENSG00000137815.15	ENST00000389629.9	5030	18	9	0	9	0	multi-exon	FALSE	canonical	2	383	junction_16	78.3725024160138	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTGAGTCTAAGGATT	NA	False	NA	NA	False	AATAAA	-25	NA	41417103	41483563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770_41464886_41466140_41466253_41470256_41470393_41471171_41471350_41474619_41474703_41475524_41475613_41475711_41475820_41476445_41476524_41477164_41477287_41477457_41477516_41478547_41478626_41479102_41479199_41480213_41480326_41480580
transcript_32025.nnic	chr15	-	1501	5	NNC	ENSG00000137806.10	novel	1509	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	56.1293149788949	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-12	True	NA	-6	True	AATAAA	-23	NA	41402501	41387352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_41387581_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_32027.nnic	chr15	-	1216	5	NNC	ENSG00000137806.10	novel	1364	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	56.3493566955294	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-30	True	NA	-6	True	AATAAA	-23	NA	41402519	41387352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_41387581_41388447_41388523_41394858_41395045_41396486_41397141_41402446
transcript_32028.known	chr15	-	1509	5	FSM	ENSG00000137806.10	ENST00000260361.9	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	32.7146756059112	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-7	True	NA	-6	True	AATAAA	-23	NA	41402496	41387352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_32029.nic	chr15	-	1380	5	NIC	ENSG00000137806.10	novel	1509	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	57.0985989320228	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	6	True	NA	-6	True	AATAAA	-23	NA	41402483	41387352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402259
transcript_32030.known	chr15	-	1364	5	FSM	ENSG00000137806.10	ENST00000560978.2	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	33.4888040992807	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTCTCCTGCCTCAGCT	-30	True	NA	NA	False	NA	NA	NA	41402519	41387217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402446
transcript_32034.known	chr15	-	1469	4	FSM	ENSG00000137806.10	ENST00000679240.1	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	59.0987873536054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	29	True	NA	NA	False	NA	NA	NA	41402460	41394046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41394359_41394858_41395045_41396486_41397141_41402143
transcript_32038.known	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_24	29.04115853214	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	3	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_32043.known	chr15	+	332	2	FSM	ENSG00000259838.1	ENST00000566760.1	332	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATTATAATAAACT	72	False	NA	NA	False	NA	NA	NA	41557026	41557435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41557169_41557245
transcript_32044.nic	chr15	+	3595	9	ISM	ENSG00000174197.18	ENST00000219905.13	12046	24	0	56467	0	114	5prime_fragment	FALSE	canonical	3	18	junction_2	5.35607132140714	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAGAAGCTAGAAT	-29	True	NA	17	True	NA	NA	NA	41660404	41713473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
transcript_32052.known	chr15	+	1409	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	19.8484050662382	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	-18	True	NA	13	True	AATAAA	-13	NA	41828091	41837581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_32057.nic	chr15	+	1512	7	ISM	ENSG00000168970.22	ENST00000491746.5	7227	24	-51	10562	-30	-2649	5prime_fragment	FALSE	canonical	3	127	junction_1	17.0171482138851	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	NA	False	NA	13	True	AATAAA	-13	NA	41828064	41837581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_41828189_41834739_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_32058.known	chr15	+	1192	7	FSM	ENSG00000243789.11	ENST00000408047.5	1192	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	54.6707315561891	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCCTGTCAGTAAAG	-8	True	NA	NA	False	NA	NA	NA	41828101	41837452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_41828189_41834893_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_3206.known	chr1	-	385	1	FSM	ENSG00000234093.3	ENST00000594193.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGGGATGTAATACATAT	7454	False	NA	NA	False	AAAACA	-30	NA	44780715	44780330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44780300_44780700
transcript_32064.known	chr15	-	4832	25	FSM	ENSG00000166887.16	ENST00000318006.10	4832	25	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	24.3441756666536	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTATTTCTCC	-3	True	NA	NA	False	AATAAA	-27	NA	42208304	42158700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42160830_42161681_42161774_42162031_42162167_42162331_42162482_42163349_42163396_42163625_42163729_42164357_42164487_42164995_42165114_42165717_42165817_42166158_42166233_42166562_42166650_42166771_42166914_42167393_42167538_42169723_42169867_42173722_42173853_42178217_42178339_42178449_42178571_42184516_42184701_42187270_42187364_42187757_42187857_42189113_42189209_42191124_42191168_42191495_42191561_42199895_42199962_42208080
transcript_32066.nic	chr15	-	2984	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-94	-80	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	78.2518839435845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATTTTTCTCATTT	287	False	NA	NA	False	TATAAA	-15	NA	42273172	42210531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42272888
transcript_32067.known	chr15	-	2964	20	FSM	ENSG00000103978.16	ENST00000389834.9	2964	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	59.2013326195747	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATTGTCTTATTTTC	-4	True	NA	NA	False	NA	NA	NA	42273433	42210446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_32068.nic	chr15	-	2910	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-25	-80	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	77.1424196443647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATTTTTCTCATTT	-2	True	NA	NA	False	TATAAA	-15	NA	42273461	42210531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_3207.known	chr1	-	1900	12	FSM	ENSG00000070785.17	ENST00000360403.7	1900	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	56.0072309381152	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-4	True	NA	NA	False	NA	NA	NA	44986595	44850521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44851004_44857703_44857808_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_32075.nic	chr15	-	2303	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	77.1424196443647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTGTTACAGTATGA	-2	True	NA	NA	False	AAGAAA	-11	NA	42273461	42211138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_32077.known	chr15	-	3049	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.2367830737542	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTAGATTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	42273584	42210451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
transcript_32090.known	chr15	-	1598	7	FSM	ENSG00000103978.16	ENST00000307216.10	1598	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	94.9625657240204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTAGCAGTTTGGTGT	-7	True	NA	NA	False	AGTAAA	-26	NA	42273436	42257934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_32091.known	chr15	-	750	7	FSM	ENSG00000103978.16	ENST00000568432.1	750	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	121.260051129793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGAATGTAAGTTAGGC	13	True	NA	NA	False	NA	NA	NA	42273078	42258790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42272888
transcript_3210.known	chr1	-	1923	11	FSM	ENSG00000070785.17	ENST00000620860.4	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	109.698176830793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	5532	False	NA	NA	False	NA	NA	NA	44986722	44850521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44851004_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_32102.known	chr15	+	1437	5	FSM	ENSG00000214013.10	ENST00000440615.6	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.517231140958	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAAAAAAACTAGATTT	10	True	NA	105	True	NA	NA	NA	42274241	42284389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42280916_42281134_42283610
transcript_32106.nic	chr15	-	1486	5	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-15	38172	-15	672	5prime_fragment	FALSE	canonical	3	95	junction_1	21.1822449235203	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACACAAAAAGAAATAC	NA	False	NA	NA	False	AATACA	-40	NA	42491156	42450994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_32107.known	chr15	-	10460	19	FSM	ENSG00000103994.18	ENST00000263805.8	10460	19	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_18	24.4499993688303	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	0	True	NA	-7	True	AATAAA	-18	NA	42457532	42412822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957
transcript_32113.known	chr15	+	2310	8	FSM	ENSG00000092531.10	ENST00000249647.8	2310	8	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_5	38.4697071388247	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTATTGTTCTTTCAA	-18	True	NA	18	True	ATTAAA	-14	NA	42495633	42533058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
transcript_32118.known	chr15	+	2480	7	FSM	ENSG00000092531.10	ENST00000349777.5	2480	7	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	248.876586997563	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATTGTTCTTTCAAA	45	False	NA	19	True	ATTAAA	-15	NA	42495305	42533059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42529674_42529820_42531412
transcript_32124.known	chr15	-	7097	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_5	25.3250863769504	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCAGTATTTGTCTT	-8	True	NA	-11	True	AATAAA	-22	NA	42548793	42537828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
transcript_32127.known	chr15	-	1459	5	FSM	ENSG00000180979.10	ENST00000569830.1	1459	5	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_4	27.5352047386614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTCTGTTGGAATGTG	-8	True	NA	NA	False	NA	NA	NA	42548793	42544042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42544125_42545076_42545263_42547260_42548245_42548350_42548457_42548692
transcript_32129.known	chr15	-	2407	6	FSM	ENSG00000180979.10	ENST00000563454.5	2407	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	40.4405736853472	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGCTGGAAGCAAGG	13	True	NA	64	True	AATAAA	-14	NA	42548772	42542523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548666
transcript_32131.known	chr15	+	626	7	FSM	ENSG00000137814.12	ENST00000564279.5	626	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	65.7917590246343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGTGACTGAGACAGA	20	True	NA	NA	False	NA	NA	NA	42548857	42566630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_3214.known	chr1	-	1457	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	28.5579333208052	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAAAAACTTTACTAGG	4	True	NA	-5	True	AATAAA	-21	NA	44986587	44874526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_32140.known	chr15	+	3921	6	FSM	ENSG00000137814.12	ENST00000260372.8	3921	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	22.7033037243481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	0	True	NA	81	True	AATAAA	-21	NA	42548837	42569994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_32146.known	chr15	+	2853	6	FSM	ENSG00000137814.12	ENST00000391623.8	2853	6	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	72.488343890587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGTCTTGTGAATTC	0	True	NA	19	True	AATAAA	-19	NA	42548837	42568930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_32150.known	chr15	+	861	5	FSM	ENSG00000137814.12	ENST00000570178.1	861	5	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_3	65.8876885313182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGTGTGTTTA	29	False	NA	NA	False	AATATA	-37	NA	42548866	42567096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42563748_42563858_42566606
transcript_32151.known	chr15	+	590	5	FSM	ENSG00000137814.12	ENST00000563479.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	70.1868043153412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATCTTTATAAACATGAT	0	True	NA	-14	True	AAGAAA	-1	NA	42548837	42566733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42558197_42558291_42561269_42561403_42563748_42563858_42566606
transcript_32153.known	chr15	+	1702	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	55.0022726803175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAT	-10	True	NA	NA	False	AATAAA	-4	NA	42548827	42567858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_32156.nnic	chr15	+	704	4	NNC	ENSG00000137814.12	novel	3921	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	68.538715741948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	0	True	NA	81	True	AATAAA	-21	NA	42548837	42569994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_42548966_42558197_42558291_42559338_42559352_42569524
transcript_32157.nic	chr15	+	709	4	ISM	ENSG00000137814.12	ENST00000260372.8	3921	6	0	8307	0	0	5prime_fragment	FALSE	canonical	3	130	junction_2	12.2836838484589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	0	True	NA	6	True	AATAAA	-20	NA	42548837	42561687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269
transcript_32159.known	chr15	-	1961	12	FSM	ENSG00000128881.18	ENST00000567840.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	6.27206847660376	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCATTTTTGTAACAC	-3	True	NA	NA	False	CATAAA	-18	NA	42920809	42776917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_42777243_42783418_42783636_42794643_42794802_42810613_42810740_42811687_42811781_42817031_42817098_42827927_42828033_42829937_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42920437
transcript_3216.nic	chr1	-	770	5	ISM	ENSG00000070785.17	ENST00000372183.7	1457	10	-12	52013	0	88	5prime_fragment	FALSE	canonical	3	346	junction_3	18.060661671157	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACTATACTGTGTGAAA	-8	True	NA	NA	False	AATAAA	-34	NA	44986599	44926539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_32160.known	chr15	-	3332	29	FSM	ENSG00000159459.12	ENST00000546274.6	3332	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	6.61977556805581	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTTTTTAAATTG	-15	True	NA	NA	False	AATAAA	-23	NA	43106113	43015655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
transcript_32166.known	chr15	+	1634	12	FSM	ENSG00000166946.14	ENST00000566515.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	96.6299920930392	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAATAAAATGCTAACT	36	False	NA	NA	False	AGTAAA	-32	NA	43185327	43195164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194138_43194414_43194462_43194726
transcript_32168.known	chr15	+	3515	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	22.284748147556	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGTTATTCCTT	-18	True	NA	7	True	AATAAA	-20	NA	43185402	43197177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_32170.known	chr15	+	1385	10	FSM	ENSG00000166946.14	ENST00000568507.5	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	76.6710143694763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	18	True	NA	NA	False	AATAAA	-6	NA	43185438	43195180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_32171.known	chr15	+	1450	10	FSM	ENSG00000166946.14	ENST00000563065.5	1450	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	77.6980543792506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	-15	True	NA	NA	False	AATAAA	-21	NA	43185405	43195195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43185608_43185819_43185880_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_32173.nic	chr15	+	1299	8	NIC	ENSG00000166946.14	novel	3515	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	102.541579421248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCCCTTCCAAAGTTT	-18	True	NA	NA	False	AATAAA	-24	NA	43185402	43195198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_43185608_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_32175.known	chr15	+	4268	13	FSM	ENSG00000168803.16	ENST00000562188.7	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	3.43996124009172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCTTATCATGAAATTC	-13	True	NA	NA	False	NA	NA	NA	43330671	43354569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906_43349046_43350940_43351042_43351750
transcript_3218.known	chr1	-	3597	21	FSM	ENSG00000126107.15	ENST00000372172.5	3597	21	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_9	18.9300686739378	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCAGAATGTGTTTAT	-13	True	NA	-7	True	AATAAA	-13	NA	45011324	45002547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239_45008322_45008535_45008702_45009143_45009227_45009368_45009483_45009567_45009684_45009985_45010122_45010200_45010294_45010545_45010707_45010888
transcript_32180.nic	chr15	+	1737	11	ISM	ENSG00000168803.16	ENST00000562188.7	4268	13	-22	5157	-22	0	5prime_fragment	FALSE	canonical	3	45	junction_6	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	-35	True	NA	3	True	ATTAAA	-16	NA	43330649	43349412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_32184.nic	chr15	+	1516	10	NIC	ENSG00000168803.16	novel	4268	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	15.4328493644619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	NA	False	NA	3	True	ATTAAA	-16	NA	43330644	43349412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_43330860_43331899_43332001_43333310_43333435_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_32186.nic	chr15	+	1449	9	ISM	ENSG00000168803.16	ENST00000428046.7	3514	12	-323	7918	-321	103	5prime_fragment	TRUE	canonical	3	45	junction_6	3.60338382634989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTATTTTTCCTACGT	NA	False	NA	NA	False	NA	NA	NA	43330350	43345980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853
transcript_32191.nic	chr15	+	731	3	ISM	ENSG00000168803.16	ENST00000428046.7	3514	12	-323	20467	-321	1048	5prime_fragment	FALSE	canonical	3	52	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTATGTTTTTCCATTTT	NA	False	NA	NA	False	AAGAAA	-9	NA	43330350	43333431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_43330860_43331899_43332001_43333310
transcript_32192.known	chr15	+	519	2	FSM	ENSG00000168803.16	ENST00000565555.1	519	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAAAGTTGA	140	False	NA	NA	False	NA	NA	NA	43330824	43332383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43330860_43331899
transcript_32194.nic	chr15	-	2261	12	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-73	23814	-3	-9308	5prime_fragment	FALSE	canonical	3	192	junction_2	19.8165136912635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTCAGAAGCTATGGA	-25	True	NA	NA	False	NA	NA	NA	43493159	43456462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_32195.known	chr15	-	6015	27	FSM	ENSG00000067369.14	ENST00000382039.7	6015	27	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	76.6877650842002	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATTTCTTCATCTGTT	29	False	NA	-5	True	AATAAA	-26	NA	43493105	43407213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413335_43415593_43415810_43416224_43416417_43420304_43420736_43421854_43422127_43428015_43428169_43432193_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_32196.nic	chr15	-	563	5	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-73	48298	-3	16491	5prime_fragment	FALSE	canonical	3	209	junction_1	15.0748134316813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGAAGAAGATACTTC	-25	True	NA	3	True	NA	NA	NA	43493159	43480946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_32198.nic	chr15	-	1080	4	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-73	58427	-3	6362	5prime_fragment	FALSE	canonical	3	219	junction_2	11.5758369027902	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGAGTATTATCAGAAC	-25	True	NA	NA	False	NA	NA	NA	43493159	43491075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_43491754_43492001_43492096_43492283_43492469_43493036
transcript_32201.known	chr15	+	6812	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	7.21206217599723	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	16	True	NA	NA	False	ATTAAA	-21	NA	43371100	43409771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
transcript_32206.nic	chr15	+	2276	16	ISM	ENSG00000137822.13	ENST00000564079.6	6812	18	-34	5832	-6	-1380	5prime_fragment	TRUE	canonical	3	61	junction_12	7.39248868033553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTATCAGTTGATTTT	-18	True	NA	NA	False	GATAAA	-3	NA	43371066	43403939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682
transcript_32210.known	chr15	+	10553	7	FSM	ENSG00000166963.13	ENST00000382031.5	10553	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.1091263510296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCTTAGGCTTTTTCT	5	True	NA	17	True	AATAAA	-24	NA	43510957	43531620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43511227_43512189_43512292_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
transcript_32211.known	chr15	+	10266	6	FSM	ENSG00000166963.13	ENST00000300231.6	10266	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.00665927567458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGTAGTGCTGCTTAG	-23	True	NA	8	True	AATAAA	-15	NA	43517607	43531611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43517701_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
transcript_32212.known	chr15	+	1779	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	47.0885690304275	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43593053	43599406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_32213.known	chr15	+	1579	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	16.1844833096395	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	927	False	NA	20	True	AGTAAA	-20	NA	43594026	43599406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_32214.nic	chr15	+	1623	9	NIC	ENSG00000237289.10	novel	1579	9	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	55.5606369203954	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	0	True	NA	20	True	AGTAAA	-20	NA	43594075	43599406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_43594368_43594878_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_32218.known	chr15	-	635	1	FSM	ENSG00000275601.1	ENST00000621680.1	635	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGCTGGTTGTAAAATGC	5874	False	NA	NA	False	AATAAA	-26	NA	43643023	43642388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43642400_43643000
transcript_32219.known	chr15	+	1779	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	46.2649375277266	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	17	True	AGTAAA	-20	NA	43692885	43699222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_32220.known	chr15	+	1579	9	FSM	ENSG00000223572.10	ENST00000413453.7	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	7.46659226153404	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	959	False	NA	17	True	AGTAAA	-20	NA	43693858	43699222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_32226.known	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7091	junction_4	378.359910960744	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	9	True	NA	8	True	AGTAAA	-19	NA	43746437	43773278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
transcript_32228.known	chr15	-	1755	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.21279489577087	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTCTGTGTCCTT	18	True	NA	-31	True	ATTAAA	-2	NA	43776966	43772619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
transcript_3223.known	chr1	+	1193	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	58.0372379395705	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	7	True	NA	15	True	AATAAA	-16	NA	45012253	45015575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_32233.known	chr15	+	1931	5	FSM	ENSG00000140264.21	ENST00000381359.5	1931	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4784.54466877466	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCGTGTGCCCAGGGCT	7	True	NA	51	True	NA	NA	NA	43777099	43794595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43777503_43785409_43785535_43791975_43792384_43792974_43793084_43793709
transcript_32234.known	chr15	-	603	4	FSM	ENSG00000205771.7	ENST00000692045.1	925	4	36	286	12	-69	multi-exon	FALSE	canonical	1	1	junction_1	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTGCCTAGGTGAAT	-4	True	NA	NA	False	NA	NA	NA	43746285	43736797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43737009_43744394_43744569_43745021_43745168_43746213
transcript_32238.known	chr15	+	690	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	5328.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	32	False	NA	28	True	ATTAAA	-17	NA	43792367	43794046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792612_43792974_43793084_43793709
transcript_32239.known	chr15	+	586	3	FSM	ENSG00000140264.21	ENST00000402131.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	5333.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	32	False	NA	-1	True	NA	NA	NA	43792367	43793975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792579_43792974_43793084_43793709
transcript_32240.known	chr15	+	2927	3	FSM	ENSG00000242028.8	ENST00000497142.2	2927	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	1583.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	21	False	NA	NA	False	AATAAA	-18	NA	43800626	43804427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43800785_43801517_43801570_43801710
transcript_32242.known	chr15	+	3096	2	FSM	ENSG00000242028.8	ENST00000458412.2	3096	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	-7	True	NA	NA	False	AATAAA	-18	NA	43800598	43804427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43800785_43801517
transcript_32243.known	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	3881.5	3774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	11	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792384_43792974_43793084_43793686
transcript_32244.known	chr15	+	2543	3	FSM	ENSG00000140264.21	ENST00000249786.9	2543	3	0	0	0	0	multi-exon	FALSE	canonical	3	8075	junction_1	1315.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGTAGGATGTGTGT	-16	True	NA	27	True	AATAAA	-36	NA	43792319	43796079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43792384_43792974_43793084_43793709
transcript_32245.known	chr15	+	582	2	FSM	ENSG00000140264.21	ENST00000409614.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	10706	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	503	False	NA	28	True	ATTAAA	-17	NA	43792838	43794046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43793084_43793709
transcript_32246.known	chr15	-	2043	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_3	18.0329559418305	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTCACATTTTGA	18	True	NA	-3	True	ATTAAA	-25	NA	43824690	43804491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
transcript_3225.nic	chr1	+	1298	10	NIC	ENSG00000126088.14	novel	1335	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	342.801133726175	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-5	True	NA	15	True	AATAAA	-16	NA	45012217	45015575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013574_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_32250.known	chr15	+	3932	13	FSM	ENSG00000092470.12	ENST00000263795.11	3932	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_10	10.295630140987	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCTCACTTTTGTGG	7	True	NA	27	True	AATAAA	-16	NA	43827001	43868412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_32253.known	chr15	+	2586	13	FSM	ENSG00000092470.12	ENST00000381246.6	2586	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	38.4587621861246	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATTCTATAGTA	-15	True	NA	30	True	ATTAAA	-20	NA	43826979	43867018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_43827119_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_32254.known	chr15	-	396	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCATATGAAAGACTGAAA	3656	False	NA	NA	False	AAGAAA	-5	NA	43876244	43875848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_43875800_43876200
transcript_32255.known	chr15	+	3974	10	FSM	ENSG00000166734.20	ENST00000299957.11	3974	10	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_9	37.2273628291056	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTGCTGATTCT	-7	True	NA	11	True	AATAAA	-18	NA	44288718	44415758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44402886_44403055_44413335
transcript_3226.known	chr1	+	1335	10	FSM	ENSG00000126088.14	ENST00000651476.1	1335	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	251.518499430073	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	NA	False	NA	15	True	AATAAA	-16	NA	45012161	45015575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_32261.known	chr15	+	6433	13	FSM	ENSG00000137770.14	ENST00000260327.9	6433	13	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_11	29.48964036554	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	7	True	NA	15	True	AATAAA	-16	NA	44427628	44529038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
transcript_32270.nic	chr15	+	946	4	ISM	ENSG00000137770.14	ENST00000260327.9	6433	13	-425	42460	-418	0	5prime_fragment	FALSE	canonical	3	430	junction_3	30.3461511379761	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATGTAAAACAAAATGGAA	-5	True	NA	NA	False	NA	NA	NA	44427203	44486578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550
transcript_32272.nnic	chr15	-	1377	3	NNC	ENSG00000179523.6	novel	1408	3	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	-9	True	NA	-6	True	AATAAA	-19	NA	44536687	44534504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_44535475_44536042_44536359_44536596
transcript_32273.known	chr15	-	1408	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	20.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	NA	False	NA	-6	True	AATAAA	-19	NA	44536922	44534504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536042_44536359_44536800
transcript_32278.known	chr15	-	2863	2	FSM	ENSG00000179523.6	ENST00000313807.5	2873	2	10	0	-1	0	multi-exon	FALSE	canonical	3	68	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	44536923	44533492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536042
transcript_32279.known	chr15	-	570	2	FSM	ENSG00000179523.6	ENST00000558323.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGATTGGAAGGAGGCA	939	False	NA	NA	False	NA	NA	NA	44535943	44535088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44535759
transcript_3228.known	chr1	+	1102	9	FSM	ENSG00000126088.14	ENST00000636293.1	1102	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	287.907510105242	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-4	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_32280.known	chr15	-	500	2	FSM	ENSG00000179523.6	ENST00000559356.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAGTCAGGAAAAGG	-12	True	NA	NA	False	NA	NA	NA	44536894	44535068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536800
transcript_32283.known	chr15	-	1288	3	FSM	ENSG00000179523.6	ENST00000653319.1	1288	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCTTTCTGCATATA	NA	False	NA	-28	True	NA	NA	NA	44537046	44534526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_44535475_44536042_44536359_44537022
transcript_32285.known	chr15	+	2479	8	FSM	ENSG00000104131.13	ENST00000261868.10	2479	8	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_6	87.3248684686168	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGGTACAGGTATTCT	-15	True	NA	21	True	ATTAAA	-18	NA	44537146	44562803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_32293.known	chr15	+	925	7	FSM	ENSG00000104131.13	ENST00000535391.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	235.242191982835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGCAACGTGACAAAAAA	21	True	NA	NA	False	ACTAAA	-13	NA	44537182	44561447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44560248_44560323_44561017
transcript_32298.known	chr15	+	1550	6	FSM	ENSG00000104131.13	ENST00000424492.7	1550	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	230.825821779107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTAAATTGTTATGTT	15	True	NA	38	True	TATAAA	-33	NA	44537124	44561999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44537238_44537323_44537428_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_32300.nic	chr15	+	424	4	ISM	ENSG00000104131.13	ENST00000535391.5	925	7	-136	9943	-78	-3070	5prime_fragment	FALSE	canonical	3	607	junction_3	34.7978287956144	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATTAAAAAGAGGGT	9759	False	NA	44	True	GATAAA	-32	NA	44537046	44551504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430
transcript_32302.nic	chr15	+	350	3	ISM	ENSG00000104131.13	ENST00000535391.5	925	7	-136	10517	-78	-3644	5prime_fragment	FALSE	canonical	3	655	junction_1	18.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCACTGGGGCGCCTC	9759	False	NA	NA	False	AGTAAA	-6	NA	44537046	44550930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_44537238_44537323_44537428_44550875
transcript_32303.known	chr15	+	943	4	FSM	ENSG00000166710.22	ENST00000648006.3	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	2439	junction_2	62.8242699033494	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	0	True	NA	14	True	AATAAA	-14	NA	44711516	44718145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44711614_44715422_44715702_44716328_44716357_44717606
transcript_32304.known	chr15	+	1081	3	FSM	ENSG00000166710.22	ENST00000559916.1	1081	3	0	0	0	0	multi-exon	FALSE	canonical	3	2439	junction_2	72	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAACAGGGAATTGATT	-4	True	NA	NA	False	NA	NA	NA	44711512	44717029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44711614_44715422_44715702_44716328
transcript_32305.known	chr15	+	3190	2	FSM	ENSG00000185880.13	ENST00000560141.2	3190	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATGGATGTTGTGAG	1	True	NA	2	True	AATAAA	-12	NA	44729000	44734000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_44729553_44731362
transcript_3231.known	chr1	+	1177	9	FSM	ENSG00000126088.14	ENST00000652287.1	1177	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	276.435684201588	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-4	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_32313.known	chr15	+	4758	9	FSM	ENSG00000140263.15	ENST00000674405.1	4758	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	125.049927528967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTTGCATATTTTTGT	-24	True	NA	NA	False	AATAAA	-14	NA	45023167	45077172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45068979_45072316_45072439_45073364
transcript_32315.known	chr15	+	4818	9	FSM	ENSG00000140263.15	ENST00000267814.14	4818	9	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_7	28.1247222208505	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTCCTGACTCAT	3	True	NA	NA	False	AATAAA	-27	NA	45023194	45077185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45069053_45072316_45072439_45073364
transcript_32321.known	chr15	+	817	2	FSM	ENSG00000140263.15	ENST00000674211.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTAGTCCTCTTGTA	-45	True	NA	NA	False	NA	NA	NA	45023146	45036363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45023350_45035749
transcript_32322.known	chr15	-	577	4	FSM	ENSG00000138606.20	ENST00000561091.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	66.1782105798846	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCCTCAAGTCTGAGT	505	False	NA	-35	True	AATAAA	-3	NA	45187459	45174222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_45174445_45175218_45175426_45178164_45178307_45187453
transcript_32325.known	chr15	+	1839	5	FSM	ENSG00000104164.12	ENST00000567523.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	44.2627100390385	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAATT	2	True	NA	NA	False	NA	NA	NA	45587378	45607773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45592134_45592277_45603103_45603188_45605427_45605515_45606394
transcript_32327.known	chr15	+	494	5	FSM	ENSG00000104164.12	ENST00000562384.5	494	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.3257571153372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTCTTCTCCTGTCC	3	True	NA	NA	False	NA	NA	NA	45587351	45606527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45597879_45597892_45603099_45603188_45605427_45605515_45606394
transcript_32328.known	chr15	+	3838	5	FSM	ENSG00000104164.12	ENST00000565323.6	3838	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	48.5669640805352	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	0	True	NA	12	True	AATAAA	-15	NA	45587589	45609708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587797_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_32329.known	chr15	+	616	5	FSM	ENSG00000104164.12	ENST00000565409.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	46.4724380681711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTATGTCATATGTTGA	-10	True	NA	NA	False	NA	NA	NA	45587784	45606601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587877_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_32331.known	chr15	+	592	4	FSM	ENSG00000104164.12	ENST00000568597.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	55.7275116576683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATATGTTGAAATCCT	-1	True	NA	NA	False	NA	NA	NA	45587375	45606607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45592134_45592277_45605427_45605515_45606394
transcript_32333.known	chr15	+	1052	4	FSM	ENSG00000104164.12	ENST00000567461.5	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	53.3062431198781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAGAGGTAAACCTTT	0	True	NA	NA	False	AAGAAA	-28	NA	45587235	45606981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45603099_45603188_45605427_45605515_45606394
transcript_32336.known	chr15	+	1051	3	FSM	ENSG00000104164.12	ENST00000567740.5	1051	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGATACTCTTTATTA	NA	False	NA	NA	False	NA	NA	NA	45587213	45607046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45587526_45605427_45605515_45606394
transcript_32339.known	chr15	+	1701	10	FSM	ENSG00000137767.14	ENST00000260324.12	1701	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.415739709641549	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTTCTATGAGAAAATT	-21	True	NA	28	True	AATAAA	-44	NA	45635028	45691281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_45635109_45658906_45659158_45661954_45662126_45669927_45669982_45673606_45673802_45676100_45676311_45682477_45682662_45688336_45688405_45689038_45689218_45690972
transcript_32340.known	chr15	+	2634	2	FSM	ENSG00000233932.6	ENST00000645050.1	2634	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACTCTACCATAATA	NA	False	NA	NA	False	NA	NA	NA	48178466	48203697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_48178647_48201243
transcript_32342.known	chr15	-	731	4	FSM	ENSG00000104177.19	ENST00000560172.5	731	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	75.6497778508892	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGCTTATTTGTTGCTT	2908	False	NA	NA	False	ATTAAA	-18	NA	48149326	48141797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_48142137_48142895_48143072_48149031_48149084_48149162
transcript_32344.known	chr15	+	1935	6	FSM	ENSG00000128951.14	ENST00000455976.6	1935	6	0	0	0	0	multi-exon	TRUE	canonical	3	1864	junction_5	185.699326870078	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	666	False	NA	NA	False	AATAAA	-23	NA	48332102	48343369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_32347.known	chr15	-	5560	27	FSM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	13.1944941000484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTATGAATTATTTT	2	True	NA	-1	True	AATAAA	-18	NA	48811069	48737937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_32350.known	chr15	-	1947	13	FSM	ENSG00000103995.14	ENST00000560322.5	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.49853789918334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGATGAAAAAAGCATTG	NA	False	NA	NA	False	AAGAAA	-24	NA	48811146	48772514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_32351.nic	chr15	-	1005	8	ISM	ENSG00000103995.14	ENST00000560322.5	1947	13	77	18805	0	6351	5prime_fragment	FALSE	canonical	3	51	junction_1	11.2739540896851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAGAGATACAG	2	True	NA	NA	False	NA	NA	NA	48811069	48791319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_32352.known	chr15	+	2040	1	FSM	ENSG00000255302.5	ENST00000530028.3	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAATTCAGAGCCTTA	7	True	NA	3	True	AGTAAA	-20	NA	48878133	48880173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_48878100_48880200
transcript_32355.nic	chr15	-	1954	12	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	-127	24061	-126	-1152	5prime_fragment	FALSE	canonical	1	4	junction_3	3.2878438763682	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAGAAGGAAATTGC	192	False	NA	NA	False	NA	NA	NA	49046573	49012698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_32356.nic	chr15	-	1879	10	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	-319	28216	-318	63	5prime_fragment	FALSE	canonical	1	4	junction_1	2.58198889747161	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGGTACATATTCATTT	0	True	NA	NA	False	NA	NA	NA	49046765	49016853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_32357.nic	chr15	-	1523	10	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	-26	28279	-25	0	5prime_fragment	FALSE	canonical	1	4	junction_1	2.58198889747161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTAGCAGCAGCCCTTGC	-7	True	NA	NA	False	AAAAAG	-14	NA	49046472	49016916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_32360.known	chr15	-	7059	18	FSM	ENSG00000138593.9	ENST00000559471.6	7059	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	2.81862318840257	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCCTTTCAGAAGAGAT	19	True	NA	-16	True	AATAAA	-19	NA	49046446	48988637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_32365.nic	chr15	+	2060	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	27.7064974329127	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	-37	True	NA	11	True	ATTAAA	-22	NA	49155757	49328514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_49156017_49161739_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_32367.nic	chr15	+	2029	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	28.6949472904203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	-30	True	NA	11	True	ATTAAA	-22	NA	49155764	49328514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_49156017_49161763_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_32372.known	chr15	+	5299	10	FSM	ENSG00000156958.15	ENST00000327171.7	5299	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	19.715256986017	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	-30	True	NA	6	True	AATAAA	-18	NA	49155764	49331882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_32375.known	chr15	+	5176	10	FSM	ENSG00000156958.15	ENST00000560031.6	5176	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.6599311133072	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	-18	True	NA	6	True	AATAAA	-18	NA	49170246	49331882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_32376.known	chr15	+	1834	10	FSM	ENSG00000156958.15	ENST00000396509.6	1834	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	24.4313096024116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	-13	True	NA	11	True	ATTAAA	-22	NA	49170203	49328514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49170359_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_32383.known	chr15	+	1768	10	FSM	ENSG00000156958.15	ENST00000559454.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.4352211222124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAAACTGATACCACTG	213	False	NA	0	True	ATTAAA	-11	NA	49170477	49328503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49170578_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_32384.known	chr15	-	6576	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.875257746861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAAGTATTTACTGTG	0	True	NA	NA	False	AATAAA	-15	NA	49155599	49122726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_32385.known	chr15	-	2036	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	120.91258895031	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	NA	False	NA	-6	True	AATAAA	-17	NA	49155661	49127349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_324.known	chr1	+	2228	1	FSM	ENSG00000224870.8	ENST00000572242.1	2228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCAAATTACTCTGTC	-3	True	NA	6	True	TATAAA	-7	NA	1399805	1402033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399800_1402000
transcript_32401.nic	chr15	-	1417	7	ISM	ENSG00000166262.16	ENST00000561064.5	1596	11	105	153736	-2	0	5prime_fragment	FALSE	canonical	2	3	junction_4	4.20317340430616	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-13	True	NA	-12	True	ATTAAA	-16	NA	49620824	49576135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620630
transcript_32403.nic	chr15	-	1158	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	10.8148046676766	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	NA	False	NA	-1	True	AATAAA	-23	NA	49396442	49328392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367609_49371301_49371400_49395974
transcript_32406.nic	chr15	-	1147	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	3.89871773792359	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-1	True	NA	-12	True	ATTAAA	-16	NA	49620855	49576135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_49576846_49577628_49577665_49588015_49588084_49611214_49611269_49615120_49615244_49620699
transcript_32408.nic	chr15	-	919	4	ISM	ENSG00000166262.16	ENST00000559573.3	2204	5	0	1431	0	0	intron_retention	FALSE	canonical	3	18	junction_2	3.77123616632825	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	NA	False	NA	-1	True	AATAAA	-23	NA	49396442	49328392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974
transcript_32416.nic	chr15	+	1272	6	NIC	ENSG00000104047.15	novel	1201	6	NA	NA	-79	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_2	160.671839474128	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATATATAATGCCTGT	-2	True	NA	31	True	AATAAA	-33	NA	49620957	49643657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535_49634795_49643330
transcript_32419.nnic	chr15	+	3290	6	NNC	ENSG00000104047.15	novel	13776	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	150.283199327137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	-35	True	NA	NA	False	AATAAA	-20	NA	49621016	49656232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330_49643438_49653877
transcript_32420.known	chr15	+	13776	6	FSM	ENSG00000104047.15	ENST00000251250.7	13776	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	158.108064310458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	47	False	NA	NA	False	AATAAA	-20	NA	49621098	49656232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621123_49623670_49623799_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_32422.known	chr15	+	794	5	FSM	ENSG00000104047.15	ENST00000559223.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	169.853429461992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATTTATAGATAGCAC	-7	True	NA	NA	False	NA	NA	NA	49621044	49634730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535
transcript_32423.known	chr15	+	13699	5	FSM	ENSG00000104047.15	ENST00000403028.8	13699	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	36.4717356318561	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	-4	True	NA	NA	False	AATAAA	-20	NA	49621047	49656232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_32427.nic	chr15	+	2370	4	ISM	ENSG00000104047.15	ENST00000403028.8	13699	5	-31	19896	-20	1606	5prime_fragment	FALSE	canonical	3	316	junction_2	41.7957998953111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTCTCCTGTATAATA	-35	True	NA	NA	False	AATAAA	-35	NA	49621016	49636336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535
transcript_32428.known	chr15	+	552	4	FSM	ENSG00000104047.15	ENST00000560632.5	552	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	189.221210932249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAGGATTCAAAATAA	30	True	NA	NA	False	AATAAA	-20	NA	49621081	49634595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_49621123_49625112_49625432_49632170_49632303_49634535
transcript_32429.known	chr15	-	5688	28	FSM	ENSG00000104043.15	ENST00000284509.11	5688	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.388447721544501	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTTTTATCTCTTCT	-6	True	NA	NA	False	AGTAAA	-20	NA	50119233	49858237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_49860476_49862244_49862376_49866345_49866485_49876277_49876524_49879375_49879460_49897291_49897516_49898067_49898252_49901091_49901240_49916933_49917040_49918838_49918951_49920245_49920411_49923378_49923495_49931118_49931308_49934016_49934183_49961976_49962021_49972581_49972791_49979616_49979814_49981205_49981295_49987390_49987550_49996676_49996760_50002152_50002224_50010844_50010918_50038767_50038830_50044593_50044693_50047350_50047465_50074126_50074186_50106938_50107009_50119122
transcript_32430.known	chr15	+	2384	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	6.8168274000791	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	-2	True	NA	10	True	ATTAAA	-18	NA	50182195	50236385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
transcript_32434.nic	chr15	-	2763	10	NIC	ENSG00000104064.18	novel	4609	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	88.4292281718083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	-12	True	NA	-16	True	ATTAAA	-10	NA	50355202	50277262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_32435.known	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	56.6545176927666	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	6	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32436.known	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	43.1637507058875	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-8	True	NA	NA	False	AATAAA	-17	NA	50355198	50275388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32439.known	chr15	-	1412	9	FSM	ENSG00000104064.18	ENST00000560825.5	1412	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	99.3164135478119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATGAATGAATGAGTG	-12	True	NA	-24	True	AATAAA	-6	NA	50355202	50285893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_32440.known	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	56.8976883429855	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	6	True	NA	-10	True	AATAAA	-20	NA	50355153	50285879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32441.known	chr15	-	1401	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	39.7199379328286	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-8	True	NA	-10	True	AATAAA	-20	NA	50355198	50285879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_32447.known	chr15	+	2277	3	FSM	ENSG00000244879.9	ENST00000648591.1	2277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCATCTCACTTTCAG	-2	True	NA	NA	False	AATATA	-3	NA	50355475	50372158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355766_50356099_50356258_50370329
transcript_32448.nnic	chr15	+	1526	3	NNC	ENSG00000244879.9	novel	1098	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	28.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	-18	True	NA	16	True	ATTAAA	-19	NA	50355459	50371343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_50355766_50356099_50356308_50370331
transcript_32449.nic	chr15	+	1139	3	NIC	ENSG00000244879.9	novel	2277	3	NA	NA	2	-117	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTTTCATTGTCTATT	-16	True	NA	11	True	NA	NA	NA	50355461	50371226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_50355546_50356099_50356258_50370329
transcript_32451.nnic	chr15	+	1304	3	NNC	ENSG00000244879.9	novel	1098	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	15.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	-16	True	NA	16	True	ATTAAA	-19	NA	50355461	50371343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_50355546_50356099_50356308_50370331
transcript_32453.known	chr15	+	709	2	FSM	ENSG00000244879.9	ENST00000560359.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGGCTGTGTTTTCTTTT	55	False	NA	11	True	ATTAAA	-36	NA	50355327	50356370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355766_50356099
transcript_32454.known	chr15	+	16182	2	FSM	ENSG00000244879.9	ENST00000499624.3	16182	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACTTGTCTTTGTCCT	-11	True	NA	NA	False	CATAAA	-17	NA	50355466	50372202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355546_50356099
transcript_32455.known	chr15	+	1098	2	FSM	ENSG00000244879.9	ENST00000668321.1	1098	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	-18	True	NA	16	True	ATTAAA	-19	NA	50355459	50371343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50355546_50370331
transcript_32456.known	chr15	+	18865	20	FSM	ENSG00000138592.14	ENST00000307179.9	18865	20	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	54.9065183905595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTGTCTCATACCTGT	1	True	NA	NA	False	AATAAA	-17	NA	50424404	50514421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_32460.known	chr15	+	19026	20	FSM	ENSG00000138592.14	ENST00000396444.7	19026	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	62.7604159171542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGTGTCTCATACCT	-22	True	NA	NA	False	AATAAA	-15	NA	50424381	50514419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_32465.nic	chr15	+	1913	12	NIC	ENSG00000138592.14	novel	1917	12	NA	NA	-37	71	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	84.1622792954085	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAGAAGCTGAAGAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	50424342	50481776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32466.nic	chr15	+	1965	12	NIC	ENSG00000138592.14	novel	1917	12	NA	NA	-37	123	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	84.1622792954085	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAATGGAGAAGAAAGA	NA	False	NA	NA	False	AAAAAG	-6	NA	50424342	50481828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32467.known	chr15	+	1917	12	FSM	ENSG00000138592.14	ENST00000559329.5	1917	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	87.2418505985961	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCGGGAAAGGCAGCA	1	True	NA	NA	False	AAGAAA	-3	NA	50424404	50481702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424655_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32469.nic	chr15	+	1828	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-139	32645	-114	71	5prime_fragment	FALSE	canonical	3	132	junction_1	48.9893866056721	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAGAAGCTGAAGAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	50424265	50481776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32470.nic	chr15	+	1764	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-23	32593	0	123	5prime_fragment	FALSE	canonical	3	132	junction_1	48.9893866056721	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAATGGAGAAGAAAGA	-22	True	NA	NA	False	AAAAAG	-6	NA	50424381	50481828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32476.known	chr15	+	1449	10	FSM	ENSG00000138592.14	ENST00000560730.5	1449	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	116.438613085539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCGGGAAAGGCAGCAAGA	11	True	NA	NA	False	AAAAAG	-3	NA	50424414	50481705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476998_50477275_50477500_50481480
transcript_32478.known	chr15	+	1568	10	FSM	ENSG00000138592.14	ENST00000625664.2	1568	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.6214484191256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAGAAAAA	23	True	NA	NA	False	AAGAAA	-37	NA	50424426	50481682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424655_50439008_50439178_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_32487.known	chr15	+	609	6	FSM	ENSG00000138592.14	ENST00000561211.5	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.8325932691564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCATCAGTCCAGGGT	32	False	NA	NA	False	NA	NA	NA	50424493	50465173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424515_50439008_50439178_50449399_50449486_50458999_50459163_50462279_50462323_50465046
transcript_32492.known	chr15	+	582	4	FSM	ENSG00000138592.14	ENST00000560954.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.730554087037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGATTCCAAAGACAAAA	-22	True	NA	NA	False	NA	NA	NA	50424381	50459134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50458999
transcript_32493.known	chr15	-	10382	39	FSM	ENSG00000092439.16	ENST00000646667.1	10382	39	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_15	21.4800203500422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATCAAGTAATTATTT	-6	True	NA	NA	False	AATAAA	-21	NA	50686797	50557157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583160_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
transcript_32497.nic	chr15	-	2686	10	ISM	ENSG00000092439.16	ENST00000560955.5	7218	39	-33	69913	-7	-26259	5prime_fragment	FALSE	canonical	3	84	junction_2	7.6610285226392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAATTAATAAATG	-13	True	NA	NA	False	NA	NA	NA	50686804	50630205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
transcript_32499.known	chr15	-	7270	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	20.2208469916872	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTGTTTTATTTTG	-19	True	NA	NA	False	AATAAA	-19	NA	50765706	50702265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
transcript_325.known	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	33.1762967593833	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-19	True	NA	-12	True	AATGAA	-17	NA	1407293	1401908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
transcript_32500.known	chr15	+	6743	21	FSM	ENSG00000081014.11	ENST00000261842.10	6743	21	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_11	11.4568756648573	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGGTCTATGTTC	-22	True	NA	11	True	AATAAA	-17	NA	50908682	51005895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_50908929_50912077_50912150_50915447_50915572_50923930_50924005_50925097_50925220_50929008_50929169_50930804_50930972_50934623_50934698_50941441_50941565_50941665_50941776_50948019_50948160_50949825_50949939_50950050_50950170_50958491_50958795_50968262_50968378_50984021_50984146_50993369_50993626_50997325_50997884_50999071_50999263_51001025_51001184_51002501
transcript_32501.known	chr15	-	1954	3	FSM	ENSG00000104093.14	ENST00000558507.1	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGGAACATAGTAGGT	-10	True	NA	NA	False	NA	NA	NA	51622770	51567042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_51568559_51576055_51576182_51622458
transcript_32505.known	chr15	+	3160	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_6	36.5450022586214	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	6	True	NA	18	True	AATAAA	-16	NA	51681502	51721026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_32512.known	chr15	+	2163	11	FSM	ENSG00000104112.9	ENST00000542355.6	2163	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	156.614846039576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGGATCCAGGTAAA	-5	True	NA	NA	False	NA	NA	NA	51681491	51720071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_51681838_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_32514.nic	chr15	+	1269	10	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	190	19783	161	8907	5prime_fragment	FALSE	canonical	3	486	junction_6	38.9589844469257	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGGATTGACAGCTCT	-16	True	NA	4	True	NA	NA	NA	51681692	51701243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106
transcript_32516.nic	chr15	+	1121	7	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	0	28690	0	0	5prime_fragment	FALSE	canonical	3	486	junction_6	45.5427149925088	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCACTGTGTGGTTGTG	6	True	NA	7	True	NA	NA	NA	51681502	51692336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158
transcript_32518.nic	chr15	+	304	4	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	195	37743	166	-9053	5prime_fragment	FALSE	canonical	3	568	junction_3	19.7033556081755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAAAATTGAGAA	-11	True	NA	NA	False	NA	NA	NA	51681697	51683283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218
transcript_32521.known	chr15	-	775	3	FSM	ENSG00000140280.14	ENST00000558126.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGCTGTTTAAGTGA	10	True	NA	NA	False	NA	NA	NA	51751437	51723243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_51723650_51724789_51724992_51751270
transcript_32522.known	chr15	-	1228	3	FSM	ENSG00000140280.14	ENST00000454181.6	1228	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	13.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTCCTTTTTTTTT	638	False	NA	-4	True	AATAAA	-41	NA	51751585	51723068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_51723650_51724789_51725122_51751270
transcript_32523.known	chr15	+	9150	10	FSM	ENSG00000128872.10	ENST00000249700.9	9150	10	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	3.08320820566925	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGACTGGTTTTATATG	-3	True	NA	NA	False	AATAAA	-20	NA	51751596	51816363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_51751713_51766372_51766568_51768261_51768419_51773711_51773835_51776931_51777019_51781043_51781175_51782720_51782829_51798196_51798341_51806376_51806522_51808419
transcript_32524.known	chr15	+	8232	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	24.5633471801251	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTTTTTGAAAAAGC	-17	True	NA	16	True	AATAAA	-22	NA	51829652	51915725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
transcript_32533.nic	chr15	+	567	3	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-27	46353	-2	6389	5prime_fragment	FALSE	canonical	3	320	junction_2	10	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCCCCAGAATTTTAA	-5	True	NA	NA	False	CATAAA	-40	NA	51829625	51869372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51829837_51862810_51863011_51869216
transcript_32534.nic	chr15	+	1682	2	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-27	51444	-2	1298	5prime_fragment	FALSE	canonical	3	340	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGGAAAAAGCATAAGAC	-5	True	NA	NA	False	NA	NA	NA	51829625	51864281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_51829837_51862810
transcript_32535.nnic	chr15	-	1238	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5571	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.13634802694357	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	-6	True	NA	NA	False	AATAAA	-17	NA	51936198	51918962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_51919144_51922715_51922909_51924039_51924179_51925744_51925882_51926777_51926873_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_32536.nnic	chr15	-	1229	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5571	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.18330013267038	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	-6	True	NA	NA	False	AATAAA	-17	NA	51936198	51918962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_51919144_51922724_51922909_51924039_51924179_51925744_51925882_51926777_51926873_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_32540.known	chr15	+	5338	6	FSM	ENSG00000069956.14	ENST00000681888.1	5338	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	230.563657153507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGCCAATTACTTT	-27	True	NA	-10	True	AATAAA	-3	NA	52019208	52067359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_52019391_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
transcript_32541.known	chr15	+	5330	6	FSM	ENSG00000069956.14	ENST00000261845.7	5330	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_3	34.5681934731915	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTCCACTTGCAATC	-17	True	NA	6	True	AATAAA	-19	NA	52019218	52067375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_52019377_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
transcript_32543.known	chr15	+	514	3	FSM	ENSG00000069956.14	ENST00000558100.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCACGGTAATCTGAGT	2	True	NA	NA	False	NA	NA	NA	52019237	52046124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_52019377_52042753_52042834_52045829
transcript_32548.known	chr15	-	2165	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_10	46.3167320675961	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-12	True	NA	-1	True	AATAAA	-16	NA	51971778	51938024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_32551.nnic	chr15	-	2234	12	NNC	ENSG00000166477.13	novel	2165	12	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	143.023491106407	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	96	False	NA	-1	True	AATAAA	-16	NA	51971822	51938024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_51938286_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_32554.nic	chr15	-	1361	7	ISM	ENSG00000166477.13	ENST00000299601.10	2165	12	-44	16512	-44	-1322	5prime_fragment	FALSE	canonical	3	386	junction_5	44.0482689784741	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAATGAAATTAAAGA	96	False	NA	NA	False	NA	NA	NA	51971822	51954536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_32557.known	chr15	-	866	1	FSM	ENSG00000274528.1	ENST00000612566.1	866	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	1820	False	NA	2	True	AATAAA	-22	NA	52018032	52017166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52017200_52018000
transcript_32558.known	chr15	-	1735	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	17.6022725805505	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCTATTGTCTTTT	372	False	NA	-6	True	NA	NA	NA	52180001	52122205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
transcript_32564.nic	chr15	-	1184	4	ISM	ENSG00000069966.19	ENST00000560075.1	817	6	11355	-424	-6	424	3prime_fragment	FALSE	canonical	3	215	junction_1	17.5562587763516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTAATTAGCTGGG	-43	True	NA	NA	False	NA	NA	NA	52179979	52146742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_52147536_52149883_52149926_52153939_52154077_52179767
transcript_32565.known	chr15	+	2554	3	FSM	ENSG00000259577.2	ENST00000654724.1	2554	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTCAGGAGTTCAAGAC	523	False	NA	NA	False	NA	NA	NA	52180027	52206915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_52180402_52181049_52181203_52204888
transcript_32566.known	chr15	+	2131	3	FSM	ENSG00000259577.2	ENST00000559779.2	2131	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCTAAAAGTAATTTTAAA	494	False	NA	NA	False	NA	NA	NA	52179998	52205963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_52180402_52180549_52181203_52204888
transcript_32567.known	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	36	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52149926_52153939_52154077_52179767
transcript_32568.known	chr15	+	1972	2	FSM	ENSG00000259577.2	ENST00000560518.1	1972	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATCACTGAGAATCTG	712	False	NA	NA	False	AATAAA	-20	NA	52180216	52205874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_52181203_52204888
transcript_32569.known	chr15	-	11971	40	FSM	ENSG00000197535.16	ENST00000687574.1	12223	40	252	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	16.6853150109646	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTTGTCAGTGTC	19	True	NA	NA	False	AATAAA	-12	NA	52528880	52307285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52346360_52346462_52348817_52348827_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
transcript_32571.known	chr15	-	745	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	745.590146572946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACTCTTATTTAA	42	False	52569182	NA	False	TTTAAA	-45	NA	52569167	52551593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
transcript_32574.known	chr15	-	5366	3	FSM	ENSG00000128989.11	ENST00000249822.9	5366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1564	junction_1	92.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTCATCTTATTTGT	-31	True	NA	0	True	ATTAAA	-17	NA	52569030	52547044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52552105_52557099_52557223_52568847
transcript_32575.known	chr15	-	275	3	FSM	ENSG00000128989.11	ENST00000567830.1	275	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	773.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCACATTCCCACTCC	42	False	52569182	NA	False	NA	NA	NA	52569167	52552008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52552105_52557099_52557223_52569111
transcript_32579.known	chr15	-	4726	13	FSM	ENSG00000047346.13	ENST00000619572.5	4726	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	10.3225750448013	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGTACTTGGCTTTT	-6	True	NA	NA	False	AATATA	-16	NA	52679388	52581320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678827
transcript_32580.known	chr15	-	959	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	376	2	279	-2	multi-exon	FALSE	canonical	3	16	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	351	False	NA	-14	True	AATAAA	-16	NA	52804613	52800167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_52800918_52804208_52804298_52804493
transcript_32585.nnic	chr15	+	883	5	Antisense	novelGene_ENSG00000166415.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACACAAGACAAAATTTT	NA	False	NA	NA	False	CATAAA	-26	NA	53492707	53515146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr15_+_53493004_53509129_53509183_53509731_53509801_53514003_53514093_53514770
transcript_32588.known	chr15	-	4333	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	53541103	53513740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_53517755_53523217_53523323_53540889
transcript_32589.known	chr15	-	4224	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTTTTTTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	53541080	53513741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_53517755_53523217_53523323_53540974
transcript_32594.known	chr15	-	1395	6	FSM	ENSG00000137876.11	ENST00000677730.1	1395	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	876.540244369875	1876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATATTTATTCTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	55196958	55181314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55182220_55183310_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
transcript_32595.known	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	8.67307455417179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-25	True	NA	0	True	AATAAA	-22	NA	55289813	55202965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
transcript_326.known	chr1	+	2196	2	FSM	ENSG00000224870.8	ENST00000418833.2	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAACAAACTGCAAATTA	6	True	NA	-1	True	GATAAA	-12	NA	1399529	1402026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1400304_1400604
transcript_32600.nnic	chr15	-	995	6	NIC	ENSG00000069974.16	novel	3447	7	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	15.7784663386528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCAGCTTTGTAAAT	NA	False	NA	0	True	AATAAA	-21	NA	55289864	55205348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55289715
transcript_32601.nnic	chr15	-	787	5	NNC	ENSG00000256061.7	novel	672	5	NA	NA	-30	12099	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	10.2347447452294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTTGTTTTAAAATT	184	False	NA	-2	True	AATAAA	-16	NA	55498407	55454861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_55454934_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32602.nic	chr15	-	921	4	ISM	ENSG00000256061.7	ENST00000457155.6	1567	8	-30	36416	-30	237	5prime_fragment	FALSE	canonical	3	27	junction_2	6.79869268479038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTCGAAAAGAAGAGTGT	184	False	NA	-12	True	AATAAA	-21	NA	55498407	55466723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32603.nic	chr15	-	630	4	ISM	ENSG00000256061.7	ENST00000457155.6	1567	8	-30	36707	-30	-54	5prime_fragment	FALSE	canonical	3	27	junction_2	6.79869268479038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGCAAATTAAAGAAGA	184	False	NA	NA	False	NA	NA	NA	55498407	55467014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32607.known	chr15	+	1910	12	FSM	ENSG00000069943.10	ENST00000164305.10	1910	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	14.5874394062067	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAGTTTTATTGTTTC	-6	True	NA	8	True	AATAAA	-19	NA	55319221	55355648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_55319414_55320274_55320411_55321272_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_32615.nic	chr15	+	1651	10	NIC	ENSG00000069943.10	novel	1910	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	14.3044497954524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAGTTTTATTGTTTC	-1	True	NA	8	True	AATAAA	-19	NA	55319226	55355648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_55319414_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_32617.known	chr15	-	3553	9	FSM	ENSG00000260916.8	ENST00000442196.8	3553	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	32.6831378542514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTCAGTCAATTTT	-10	True	NA	-14	True	AATAAA	-33	NA	55408359	55355238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_3262.known	chr1	-	3071	11	FSM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_7	4.77493455452533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-1	True	NA	-1	True	AATAAA	-17	NA	45491163	45343882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_32620.known	chr15	-	2970	8	FSM	ENSG00000260916.8	ENST00000569205.5	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	37.096124446896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAGAGGCAAACTAAGC	4	True	NA	NA	False	GATAAA	-9	NA	55408052	55359017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55407846
transcript_32621.known	chr15	-	6822	8	FSM	ENSG00000260916.8	ENST00000310958.10	6822	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	14.4321070632709	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTGAGTACTGTTT	NA	False	NA	-25	True	AATAAA	-22	NA	55408510	55355249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_32625.known	chr15	-	1445	8	FSM	ENSG00000256061.7	ENST00000448430.6	1445	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.0915374807517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	14	True	NA	3	True	ATTAAA	-22	NA	55498348	55417754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55418134_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32626.known	chr15	-	1567	8	FSM	ENSG00000256061.7	ENST00000457155.6	1567	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.2864823126702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-15	True	NA	NA	False	AATAAA	-15	NA	55498377	55430307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55430780_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_32629.nnic	chr15	-	1315	7	NIC	ENSG00000256061.7	novel	1897	9	NA	NA	-20	0	combination_of_known_splicesites	TRUE	canonical	2	6	junction_4	13.0820063021269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-35	True	NA	NA	False	AATAAA	-15	NA	55498397	55430307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55491122_55491257_55497711_55497860_55498206
transcript_3263.nic	chr1	-	2091	4	ISM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	40729	0	14121	5prime_fragment	FALSE	canonical	3	47	junction_2	4.02768199119819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	-1	True	NA	NA	False	NA	NA	NA	45491163	45384611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_45385961_45421724_45421847_45457563_45457872_45490851
transcript_32632.known	chr15	+	868	2	FSM	ENSG00000261652.3	ENST00000569691.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAAAAGCCTTTCATAT	-15	True	NA	103	True	AATAAA	-35	NA	55408494	55418798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_55408787_55418222
transcript_32633.known	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	18	True	NA	-7	True	AATAAA	-27	NA	55319123	55317183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55317868_55318863
transcript_32634.known	chr15	-	371	2	FSM	ENSG00000225973.4	ENST00000565225.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTATGCCAAAGATCAGA	34	False	NA	NA	False	NA	NA	NA	55319107	55317703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55317868_55318900
transcript_32635.known	chr15	-	801	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAAAACCCACAAATA	-20	True	NA	NA	False	AAAACA	-4	NA	55319161	55317321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55317868_55318906
transcript_32636.known	chr15	-	2866	7	FSM	ENSG00000260916.8	ENST00000568808.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.6685605754905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGATTCTGGTGTCT	12	True	NA	NA	False	AATAAA	-22	NA	55408279	55358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_55360945_55371792_55372031_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_32639.nic	chr15	-	1168	5	ISM	ENSG00000181827.16	ENST00000559447.8	10885	10	360	15858	360	416	intron_retention	FALSE	canonical	3	54	junction_1	5.80409338312195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTTATGGAACT	1584	False	NA	NA	False	NA	NA	NA	56243519	56103137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_56103671_56142777_56142901_56144400_56144484_56179269_56179304_56243124
transcript_32643.known	chr15	-	4399	22	FSM	ENSG00000137871.21	ENST00000267807.12	4399	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	24.3224745130899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTCCAATCACTG	-11	True	NA	-12	True	AATAAA	-18	NA	56733509	56630175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_32647.known	chr15	-	3666	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	20.0299775336868	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATTCTCTGTTTTA	4	True	NA	NA	False	AATAAA	-9	NA	56733494	56697762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
transcript_32648.nic	chr15	-	1748	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-123	33329	-53	1349	5prime_fragment	FALSE	canonical	3	63	junction_4	8.59302042357633	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTACACTTGAATGTGT	-1	True	NA	-8	True	ATTAAA	-20	NA	56733630	56699823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_32650.nic	chr15	-	595	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-123	34482	-53	196	5prime_fragment	FALSE	canonical	3	63	junction_4	8.59302042357633	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCAGATAGTTCTGTT	-1	True	NA	-16	True	AATAAA	-18	NA	56733630	56700976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_32651.nnic	chr15	-	1574	5	ISM	ENSG00000137871.21	ENST00000559237.5	4902	21	565	69639	9	1353	5prime_fragment	FALSE	canonical	2	2	junction_3	32.5221078652661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTTGAATGTGTGTTT	108	False	NA	-4	True	ATTAAA	-24	NA	56733521	56699819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707262_56707307_56733457
transcript_32653.known	chr15	-	1441	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	971	False	NA	-30	True	AATAAA	-19	NA	56918493	56916725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_56917213_56917539
transcript_32654.known	chr15	+	596	2	FSM	ENSG00000276524.1	ENST00000621974.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCCAGGCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	56887106	56888219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_56887171_56887687
transcript_32655.known	chr15	+	6114	21	FSM	ENSG00000140262.18	ENST00000333725.10	6114	21	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_15	55.0103626601389	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	-33	True	NA	NA	False	AATAAA	-37	NA	56918643	57289853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32657.known	chr15	+	6061	20	FSM	ENSG00000140262.18	ENST00000267811.9	6061	20	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_14	35.1426850176435	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	-52	True	NA	NA	False	AATAAA	-37	NA	56918624	57289853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32659.nic	chr15	+	1831	17	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	42	26683	-8	-54	5prime_fragment	FALSE	canonical	3	177	junction_14	33.8257829731996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGATGAAAACCTTCA	-10	True	NA	NA	False	AAAACA	-3	NA	56918666	57263170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111
transcript_32660.nic	chr15	+	2016	14	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-90	37996	-88	-1611	5prime_fragment	FALSE	canonical	3	258	junction_1	16.9408997057487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTTGTCATG	7	False	NA	NA	False	ATTAAA	-14	NA	56918534	57251857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349
transcript_32661.known	chr15	+	1809	14	FSM	ENSG00000140262.18	ENST00000543579.5	1809	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	89.7770413845506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAAAACAAAACACT	-3	True	NA	NA	False	NA	NA	NA	57219429	57286251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32664.known	chr15	+	3956	13	FSM	ENSG00000140262.18	ENST00000343827.7	3956	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	79.957410538361	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGTAAAATAGTGAGT	33	False	NA	10	True	AATAAA	-18	NA	57219465	57288506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32667.nic	chr15	+	1463	4	ISM	ENSG00000140262.18	ENST00000333725.10	6114	21	31	225043	0	-27019	5prime_fragment	FALSE	canonical	3	258	junction_1	27.4347711247363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAGAGAGAGAAAGAC	-2	True	NA	NA	False	NA	NA	NA	56918674	57064810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749
transcript_32669.known	chr15	+	4786	21	FSM	ENSG00000140262.18	ENST00000438423.6	4786	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	82.248692998734	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTGAGTTTTTTACA	-54	True	NA	18	True	AATAAA	-26	NA	56918622	57288514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_56918907_56919901_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_32670.known	chr15	+	2530	3	FSM	ENSG00000247982.7	ENST00000501726.2	2538	3	0	8	0	3	multi-exon	FALSE	canonical	0	0	junction_1	21	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAACTGTGGCTTGTG	369	False	NA	NA	False	AATAAA	-30	NA	57300364	57307761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57300925_57305318_57307069_57307541
transcript_32675.known	chr15	+	7214	19	FSM	ENSG00000128849.11	ENST00000281282.6	7214	19	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	35.6762275174456	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	-12	True	NA	24	True	AATAAA	-20	NA	57376504	57550717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
transcript_32677.nnic	chr15	+	2755	10	NNC	ENSG00000128849.11	novel	577	3	NA	NA	9065	-32285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.802858932134	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGAAAAAGAAGCT	9694	False	NA	13	True	NA	NA	NA	57386210	57518432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_57386301_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392
transcript_32685.nnic	chr15	+	2028	6	NNC	ENSG00000128849.11	novel	577	3	NA	NA	9065	14141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.030697589141	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGAGAGAGGATGAG	9694	False	NA	NA	False	ATTAAA	-1	NA	57386210	57452158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_57386301_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140
transcript_32690.nnic	chr15	+	551	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9067	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.556349186104	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	9696	False	NA	22	True	AGTAAA	-16	NA	57386212	57407282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_57386301_57402660_57402715_57405965_57406065_57406972
transcript_32694.known	chr15	+	4114	4	FSM	ENSG00000255529.9	ENST00000299638.8	4114	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	11.5854314646552	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTTTGGTGTCTTTC	18	True	NA	NA	False	TATAAA	-18	NA	57706713	57717557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57714535
transcript_32696.known	chr15	-	11158	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_9	74.4322510743831	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTTTGTGGATGAA	-47	True	NA	NA	False	AATAAA	-14	NA	58749707	58588808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_327.known	chr1	-	1693	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	39.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTTAGAGTCATTT	6	True	NA	-16	True	AATGAA	-13	NA	1407268	1401912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1402257_1405808_1407020_1407130
transcript_32707.known	chr15	-	995	6	FSM	ENSG00000137845.15	ENST00000558733.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	352.670611194072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCAGTTATTTCTT	11	True	NA	NA	False	ATTAAA	-21	NA	58749770	58655242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58655417_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_32709.nic	chr15	-	398	2	ISM	ENSG00000137845.15	ENST00000561149.1	529	4	-119	35438	-48	29655	5prime_fragment	FALSE	canonical	3	804	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGGATTATCTTACAA	-3	True	NA	NA	False	AATAAA	-13	NA	58749839	58717689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_58717728_58749479
transcript_3271.known	chr1	-	1677	16	FSM	ENSG00000132781.20	ENST00000475516.5	1677	16	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	64.5422858803952	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	338	False	NA	-4	True	AGTAAA	-20	NA	45340080	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45339975
transcript_32710.known	chr15	-	1932	2	FSM	ENSG00000137845.15	ENST00000461408.2	1932	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCAGTCACTGTTGTGT	-59	True	NA	2	True	AATAAA	-28	NA	58749719	58747344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58749037_58749479
transcript_32711.known	chr15	+	5278	14	FSM	ENSG00000157450.16	ENST00000559209.5	5278	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	33.6031486267751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAATTGTTAATATAGG	246	False	NA	NA	False	AATAAA	-17	NA	58987951	59097054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084101_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
transcript_32712.nic	chr15	+	2376	5	ISM	ENSG00000157450.16	ENST00000559209.5	5278	14	-289	37919	0	451	5prime_fragment	FALSE	canonical	3	109	junction_4	11.5108644332213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTAAAAAGAAACAAACAAAA	-4	True	NA	NA	False	AATAAA	-4	NA	58987662	59059135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355
transcript_32713.known	chr15	+	5905	14	FSM	ENSG00000157450.16	ENST00000348370.9	5905	14	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	22.0936682675103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTACTCTGGTGACTTT	-4	True	NA	100	True	GATAAA	-19	NA	58987662	59097419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
transcript_32717.known	chr15	+	9250	9	FSM	ENSG00000128923.11	ENST00000559228.6	9250	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	11.7553179455087	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTCGCTCTGTATATT	-2	True	NA	NA	False	AATAAA	-20	NA	58771301	58861900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_32718.known	chr15	+	4820	9	FSM	ENSG00000128923.11	ENST00000450403.3	4820	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	21.2893018908559	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58	False	NA	NA	False	AATAGA	-16	NA	58771361	58857533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854484
transcript_3272.known	chr1	-	1742	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	66.2559347446618	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	30	True	NA	-4	True	AGTAAA	-20	NA	45340388	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
transcript_32723.known	chr15	+	1859	9	FSM	ENSG00000128923.11	ENST00000560289.5	1859	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.3143824813255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTTATTTTGTAAC	-18	True	NA	NA	False	GATAAA	-21	NA	58771285	58854591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810287_58821716_58821824_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_32726.known	chr15	-	4168	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_15	73.5916265617224	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	0	True	NA	-6	True	AATAAA	-16	NA	58933679	58879049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_32729.nic	chr15	-	3710	21	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	25	0	intron_retention	FALSE	canonical	3	136	junction_15	105.048560199557	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAAAGTGTTGAGAA	-4	True	NA	-11	True	AATAAA	-17	NA	58933654	58879428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_32735.known	chr15	-	3021	19	FSM	ENSG00000137776.17	ENST00000557924.5	3021	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	173.810640896606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGTTCATTGCATTTC	-1	True	NA	NA	False	NA	NA	NA	58933599	58879559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58933403
transcript_3274.known	chr1	-	1708	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	64.4780755158079	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	0	True	NA	-4	True	AGTAAA	-20	NA	45339970	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
transcript_32749.nic	chr15	-	1662	12	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	25	84	combination_of_known_junctions	FALSE	canonical	3	136	junction_6	124.315913225105	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAGAAAAGAAGCGAATA	-4	True	NA	NA	False	ATTAAA	-5	NA	58933654	58893841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_3275.known	chr1	-	1776	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	0	0	0	multi-exon	FALSE	canonical	2	111	junction_15	46.4549483071741	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	5	True	NA	-4	True	AGTAAA	-20	NA	45340115	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_32752.nic	chr15	-	1578	12	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_6	124.315913225105	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGGATACTAAGAAAATA	-4	True	NA	19	True	AAAAAG	-40	NA	58933654	58893925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_3276.known	chr1	-	1888	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	0	0	0	multi-exon	FALSE	canonical	2	95	junction_15	48.9750957120045	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	NA	False	NA	-4	True	AGTAAA	-20	NA	45340470	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_32762.known	chr15	-	1373	11	FSM	ENSG00000137776.17	ENST00000249736.11	1373	11	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_5	129.703854992826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGATGAAAAGAGTAG	19	True	NA	NA	False	AAGAAA	-13	NA	58933579	58894157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_32766.known	chr15	-	896	10	FSM	ENSG00000137776.17	ENST00000558756.5	896	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	159.399412920833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTATTTTTATTT	5	True	NA	NA	False	GATAAA	-27	NA	58933449	58894089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_32775.known	chr15	-	685	3	FSM	ENSG00000137776.17	ENST00000484498.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTTTTGTATATAATATA	24	True	NA	NA	False	NA	NA	NA	58933574	58916573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58917000_58932355_58932444_58933403
transcript_32776.known	chr15	-	505	2	FSM	ENSG00000137776.17	ENST00000474342.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACAGTTCTTTAT	-18	True	NA	NA	False	NA	NA	NA	58933616	58932151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_58932444_58933403
transcript_32779.known	chr15	-	8644	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	39.0725118171102	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTTTGGAATATG	-1	True	NA	NA	False	AGTAAA	-20	NA	59372871	59132433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
transcript_3278.known	chr1	-	1662	16	FSM	ENSG00000132781.20	ENST00000528013.6	1662	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	81.5024471343584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAAGCCCCCATT	472	False	NA	-68	True	NA	NA	NA	45339946	45329305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333604_45334390_45334512_45339898
transcript_32783.known	chr15	+	1488	9	FSM	ENSG00000157456.8	ENST00000288207.7	1488	9	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	46.9674089129899	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGTGTATTTATTTGT	19	True	NA	18	True	AATAAA	-23	NA	59105145	59125045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516_59123628_59124766
transcript_32784.known	chr15	+	2503	8	FSM	ENSG00000157456.8	ENST00000621385.1	2503	8	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	48.7994647009784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATGTGTATTTATTTG	58	False	NA	17	True	AATAAA	-22	NA	59105268	59125044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516
transcript_32787.known	chr15	-	2515	10	FSM	ENSG00000140299.13	ENST00000612191.4	2515	10	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_1	32.12283522994	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGTTTAATTACC	NA	False	NA	-23	True	AATAAA	-17	NA	59689443	59662864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_32789.known	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_2	103.094616736278	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	8	True	NA	-5	True	AATAAA	-18	NA	59657515	59638061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
transcript_3279.nic	chr1	-	1785	16	NIC	ENSG00000132781.20	novel	1776	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	22	junction_14	64.9244347085304	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	327	False	NA	-4	True	AGTAAA	-20	NA	45340091	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45339975
transcript_32790.known	chr15	-	633	4	FSM	ENSG00000140307.11	ENST00000396064.7	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	734.684966499247	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTGGTGAAGCTAT	3	True	NA	-7	True	AATAAA	-19	NA	59657520	59638865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59650668_59650774_59652205_59652327_59657405
transcript_32792.known	chr15	-	408	4	FSM	ENSG00000140307.11	ENST00000484743.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	716.807893061701	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACCATCTTCTGTTAT	3	True	NA	-8	True	AATAGA	-15	NA	59657520	59639112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59652205_59652327_59657405
transcript_32793.known	chr15	-	518	3	FSM	ENSG00000140307.11	ENST00000267869.8	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	690	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGAAGCTATTAAGGTA	26	True	NA	0	True	AATAAA	-26	NA	59657497	59638858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59657405
transcript_32794.known	chr15	-	1278	2	FSM	ENSG00000140307.11	ENST00000480768.1	1278	2	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATATT	-18	True	NA	NA	False	AAAAAG	-2	NA	59657541	59651184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59652327_59657405
transcript_32795.known	chr15	-	970	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	720.495773755822	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAACTGGTGAAGC	9	True	NA	-10	True	AATAAA	-16	NA	59657514	59638868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
transcript_32796.known	chr15	+	795	1	FSM	ENSG00000234797.5	ENST00000484430.1	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	21	False	NA	NA	False	NA	NA	NA	59768351	59769146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_59768400_59769100
transcript_32799.known	chr15	-	1747	15	FSM	ENSG00000182718.18	ENST00000678870.1	1747	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	1191.32343018431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397257_60397339_60397942
transcript_328.known	chr1	+	1843	3	FSM	ENSG00000224870.8	ENST00000447725.2	1843	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGATAAACAAAAGTATAA	8	True	NA	-21	True	NA	NA	NA	1399571	1402006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1399690_1399980_1400304_1400604
transcript_32800.known	chr15	-	2069	15	FSM	ENSG00000182718.18	ENST00000678450.1	2069	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1195.66483085985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	1	True	NA	-14	True	AATAAA	-22	NA	60397985	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393012_60393441_60397257_60397339_60397942
transcript_32802.known	chr15	-	1920	15	FSM	ENSG00000182718.18	ENST00000558169.6	1920	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1312.62755648387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-2	True	NA	-14	True	AATAAA	-22	NA	60397988	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354209_60355914_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397257_60397339_60397942
transcript_32803.known	chr15	-	1790	15	FSM	ENSG00000182718.18	ENST00000557906.6	1790	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_12	1189.91155776643	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397257_60397339_60397942
transcript_32804.known	chr15	-	1676	14	FSM	ENSG00000182718.18	ENST00000396024.7	1676	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	1078.86460699973	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATTTCGAATGCTCAG	0	True	NA	-4	True	AATAAA	-32	NA	60397986	60347133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397942
transcript_32805.known	chr15	-	1989	14	FSM	ENSG00000182718.18	ENST00000678061.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1085.0898689365	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393012_60393441_60397942
transcript_32806.known	chr15	-	1964	14	FSM	ENSG00000182718.18	ENST00000559780.6	1964	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1084.19913998671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393037_60393441_60397942
transcript_32807.known	chr15	-	1838	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1082.77585959892	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
transcript_32808.known	chr15	-	1709	14	FSM	ENSG00000182718.18	ENST00000559956.6	1709	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1082.77585959892	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397942
transcript_32810.known	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	978.306512876253	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	0	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
transcript_32812.known	chr15	-	1444	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	831.732612615911	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTACTTTGTGGCCCTGC	1	True	NA	-7	True	AATAAA	-21	NA	60397985	60347331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
transcript_32813.known	chr15	-	1554	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	0	0	0	multi-exon	FALSE	canonical	3	2478	junction_12	225.761842927945	2600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	0	True	NA	-21	True	AATAAA	-15	NA	60397986	60347150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_32814.known	chr15	-	1560	13	FSM	ENSG00000182718.18	ENST00000679109.1	1560	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_12	836.860249019446	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	4735	False	NA	-14	True	AATAAA	-22	NA	60398157	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398114
transcript_32815.known	chr15	-	1615	13	FSM	ENSG00000182718.18	ENST00000559818.6	1615	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_12	837.670015910535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-2	True	NA	-14	True	AATAAA	-22	NA	60398742	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398644
transcript_32816.known	chr15	-	1542	13	FSM	ENSG00000182718.18	ENST00000559113.6	1542	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	1184.48673835266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397257_60397339_60397942
transcript_32817.known	chr15	-	1445	12	FSM	ENSG00000182718.18	ENST00000558985.6	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	843.024729302098	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGTGTCGCTATTTA	4859	False	NA	-77	True	AAGAAA	-35	NA	60398033	60347206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397942
transcript_32819.known	chr15	-	908	3	FSM	ENSG00000182718.18	ENST00000560936.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	119.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCGCAGTCATGGCCGT	0	True	NA	NA	False	ATTAAA	-21	NA	60397986	60395644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60396428_60397257_60397339_60397942
transcript_32824.known	chr15	-	7060	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_13	69.506834196358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTACTGTTGCCATGT	NA	False	NA	-6	True	AATAAA	-19	NA	60479160	60419612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
transcript_32825.known	chr15	-	7206	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	0	0	0	multi-exon	TRUE	canonical	3	289	junction_13	40.4703457965075	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCCATGTCCCC	-26	True	NA	-2	True	AATAAA	-23	NA	60479142	60419608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_3283.nnic	chr1	-	1676	15	NIC	ENSG00000132781.20	novel	1708	16	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_10	83.9842064841689	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-10	True	NA	-4	True	AGTAAA	-20	NA	45339980	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
transcript_3284.nnic	chr1	-	1649	15	NIC	ENSG00000132781.20	novel	1776	16	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_10	71.1529324477802	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-10	True	NA	-4	True	AGTAAA	-20	NA	45340030	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_32840.nic	chr15	-	3576	11	ISM	ENSG00000128915.12	ENST00000261520.9	7206	16	-8	27320	-8	562	5prime_fragment	FALSE	canonical	3	289	junction_8	47.4469177081083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGAGGACTTTTTC	-34	True	NA	-5	True	ATTAAA	-16	NA	60479150	60446928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_32847.known	chr15	-	3796	9	FSM	ENSG00000128915.12	ENST00000561114.5	3796	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	50.2885424326456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTATCATGGATTTTC	0	True	NA	NA	False	AATAAA	-16	NA	60479073	60451094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_3285.nnic	chr1	-	1823	15	NIC	ENSG00000132781.20	novel	1888	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_10	72.776180505572	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-29	True	NA	-4	True	AGTAAA	-20	NA	45340447	45329241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_32852.known	chr15	-	1470	9	FSM	ENSG00000128915.12	ENST00000558512.5	1470	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	121.501478900464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATCTTTCATGAAGTTC	187	False	NA	NA	False	AAGAAA	-21	NA	60478929	60453711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60478567
transcript_32853.known	chr15	-	1701	10	FSM	ENSG00000069667.16	ENST00000449337.6	1701	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	5.89622184952071	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGAACTTGTTTTTCTC	-16	True	NA	-54	True	AATGAA	-10	NA	60592541	60497284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60592386
transcript_32855.known	chr15	-	13300	83	FSM	ENSG00000129003.19	ENST00000249837.7	13300	83	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_79	14.8390181764231	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGGTTTGTGTTATT	415	False	NA	3	True	AATAAA	-32	NA	62060473	61852388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_61854559_61854870_61854955_61856285_61856410_61863439_61863529_61868658_61868774_61869499_61869624_61871988_61872035_61873245_61873410_61874875_61874952_61875731_61875846_61876972_61877055_61878606_61878747_61880608_61880723_61880842_61880955_61881562_61881633_61881746_61881829_61882595_61882737_61884127_61884270_61890164_61890401_61907263_61907391_61908991_61909126_61910176_61910306_61911839_61912005_61913310_61913416_61915632_61916023_61917340_61917636_61918135_61918258_61919288_61919450_61920066_61920332_61920497_61920648_61921946_61922034_61922396_61922763_61925455_61925549_61927090_61927321_61929500_61929749_61931089_61931260_61934218_61934332_61936596_61936751_61940646_61940795_61941762_61942068_61945714_61945883_61946306_61946411_61947192_61947310_61949442_61949606_61950357_61950418_61950944_61951025_61951823_61951981_61954420_61954555_61958607_61958717_61959447_61959596_61961588_61961894_61962370_61962539_61962748_61962853_61963834_61963952_61964698_61964862_61966082_61966143_61967367_61967448_61969298_61969453_61972624_61972765_61973453_61973533_61974287_61974418_61977081_61977200_61978625_61978750_61981341_61981479_61982458_61982574_61983819_61984013_61984856_61985000_61990999_61991095_61991672_61991803_62000563_62000627_62007307_62007480_62008654_62008762_62010471_62010600_62012106_62012165_62013038_62013120_62013932_62013993_62020478_62020539_62023410_62023521_62033440_62033543_62034956_62035053_62041323_62041367_62044211_62044256_62060274
transcript_32861.nic	chr15	+	1132	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	309	junction_9	623.886029477963	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	-2	True	NA	26	True	AATAAA	-15	NA	63042746	63066093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_32862.known	chr15	+	1295	10	FSM	ENSG00000140416.23	ENST00000288398.10	1295	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	679.716934547839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	NA	False	NA	26	True	AATAAA	-15	NA	63042631	63066093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_32863.known	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	730.254597916218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	-2	True	NA	16	True	AATAAA	-24	NA	63042746	63066178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_32864.known	chr15	+	1097	10	FSM	ENSG00000140416.23	ENST00000560970.6	1097	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	768.746020766576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	81	False	NA	26	True	AATAAA	-15	NA	63042829	63066093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_32866.known	chr15	+	933	9	FSM	ENSG00000140416.23	ENST00000559397.6	933	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	790.797767684634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCTTTCGTTTTGTT	21	False	NA	NA	False	NA	NA	NA	63042769	63071190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_32867.known	chr15	+	1670	9	FSM	ENSG00000140416.23	ENST00000267996.11	1670	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	842.382697694462	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	9	True	NA	37	True	AATAAA	-27	NA	63042757	63071915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_32871.nic	chr15	+	1052	9	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	189	junction_8	571.324215638546	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTGCTATTCTTT	-2	True	NA	25	True	AATAAA	-14	NA	63042746	63066092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63065895
transcript_32873.known	chr15	+	1717	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_8	225.619390511986	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	-2	True	NA	11	True	AATAAA	-1	NA	63042684	63071889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_32875.known	chr15	+	977	9	FSM	ENSG00000140416.23	ENST00000559556.5	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_5	607.384646970106	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACCTGCTTACCCCTT	9	True	NA	NA	False	NA	NA	NA	63042757	63071222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_32880.known	chr15	+	941	9	FSM	ENSG00000140416.23	ENST00000559281.6	941	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_8	781.931173042104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	23	False	NA	26	True	AATAAA	-15	NA	63048575	63066093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_32886.known	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	546.279550174428	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	-18	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_32889.nic	chr15	+	485	4	ISM	ENSG00000140416.23	ENST00000560970.6	1097	10	-83	6503	0	0	5prime_fragment	FALSE	canonical	3	1566	junction_2	200.237081702888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAGATGAAGAAAAAAT	-2	True	NA	NA	False	NA	NA	NA	63042746	63059590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562
transcript_32890.known	chr15	+	3957	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	0	0	0	0	multi-exon	FALSE	canonical	3	1643	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	0	True	NA	38	True	AAAACA	-20	NA	63042686	63047726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63042944_63044026
transcript_32893.known	chr15	-	693	5	FSM	ENSG00000185088.14	ENST00000635699.1	693	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	1242.05082424191	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-1	True	NA	-7	True	AATAAA	-19	NA	63157477	63153852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786_63156974_63157399
transcript_32895.known	chr15	-	6110	4	FSM	ENSG00000185088.14	ENST00000330964.10	6110	4	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_3	46.3105459551781	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTGGATTGGTAAAT	-1	True	NA	NA	False	AATAAA	-22	NA	63157477	63148248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157399
transcript_32896.known	chr15	-	528	4	FSM	ENSG00000185088.14	ENST00000411926.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1173.62979209327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAATCCCCTCTTTTTCT	-11	True	NA	-13	True	AATAAA	-13	NA	63158021	63153858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157915
transcript_32897.known	chr15	-	970	3	FSM	ENSG00000185088.14	ENST00000439025.1	970	3	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_2	39.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTTTACAAAATTTT	-2	True	NA	NA	False	TTTAAA	-18	NA	63157499	63154970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63155732_63156412_63156522_63157399
transcript_32898.known	chr15	+	774	9	FSM	ENSG00000166128.13	ENST00000558119.5	774	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	124.432147674948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCACCCAGCCTCAGA	10	True	NA	NA	False	NA	NA	NA	63189593	63263679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63251283_63251343_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_32900.known	chr15	+	4800	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	37.4002073550947	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	22	True	NA	16	True	AATAAA	-23	NA	63189605	63267776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_32905.known	chr15	+	584	7	FSM	ENSG00000166128.13	ENST00000559006.1	584	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	37.2006571029181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTTTGGCATTTGAT	22	True	NA	56	True	NA	NA	NA	63189605	63262776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691
transcript_32908.known	chr15	+	4138	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	10.590561835899	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	-1	True	NA	20	True	AATAAA	-22	NA	63277604	63309126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
transcript_32909.known	chr15	+	685	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	42.9825546006749	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGCAGACTACATCT	4	True	NA	-88	True	NA	NA	NA	63277609	63305801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
transcript_32911.known	chr15	+	5499	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	34.4547368135194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	13	False	NA	22	True	ATTAAA	-23	NA	63504733	63594640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32913.known	chr15	+	2439	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	31.7651101402501	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	12	True	NA	-6	True	AATAAA	-17	NA	63504634	63591444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32914.known	chr15	+	5517	15	FSM	ENSG00000140455.17	ENST00000380324.8	5517	15	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_5	12.4261081302758	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	-30	True	NA	15	True	ATTAAA	-16	NA	63504592	63594633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_32917.known	chr15	-	15197	78	FSM	ENSG00000103657.14	ENST00000443617.7	15197	78	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_33	30.0204517907548	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTCTTGGTATTGCT	-15	True	NA	-5	True	AATAAA	-19	NA	63833948	63608617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63662983_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675118_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181_63723356_63725291_63725514_63727646_63727839_63729235_63729369_63729496_63729650_63732923_63733146_63734723_63734850_63746917_63747084_63747723_63747859_63749366_63749539_63749646_63749792_63752957_63753086_63754504_63754649_63755228_63755326_63756436_63756749_63758174_63758370_63764095_63764192_63774693_63775650_63833826
transcript_32923.known	chr15	-	919	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_2	120.175912727967	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-8	True	NA	-22	True	AATAAA	-18	NA	64093838	64072564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
transcript_32925.known	chr15	-	826	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	414.153219097581	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATTCTTATAATGAC	22	True	NA	-35	True	AATAAA	-5	NA	64093808	64072577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
transcript_32927.known	chr15	-	561	4	FSM	ENSG00000166797.11	ENST00000559950.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_1	113.620225116638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGTTACTTTCAAAAAAG	-27	True	NA	NA	False	NA	NA	NA	64093857	64075404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64075538_64081101_64081152_64088686_64088852_64093644
transcript_32935.known	chr15	+	8214	15	FSM	ENSG00000028528.15	ENST00000559844.6	8214	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.845305887103	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCAGTGCATCCTTTGA	-11	True	NA	14	True	AATAAA	-22	NA	64095981	64144231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_32936.known	chr15	+	3373	15	FSM	ENSG00000028528.15	ENST00000261889.9	3373	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.900769961153	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCCTCAGTTTGGATT	0	True	NA	NA	False	AATACA	-14	NA	64095992	64139875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64138041
transcript_32941.known	chr15	+	1374	13	FSM	ENSG00000028528.15	ENST00000561026.5	1374	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118.492850229689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAAGGACCCCAGAGC	21	True	NA	NA	False	NA	NA	NA	64096013	64137618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64096173_64112572_64112685_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_32943.known	chr15	-	888	5	FSM	ENSG00000166794.6	ENST00000680343.1	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2360.40974991631	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	582	False	NA	NA	False	NA	NA	NA	64162581	64155739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162492
transcript_32944.known	chr15	-	893	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	5179	junction_4	144.993965391667	2775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	-26	True	NA	NA	False	AATAAA	-30	NA	64163022	64155816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
transcript_32945.known	chr15	-	869	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	2151.41052567844	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-30	True	NA	NA	False	NA	NA	NA	64163026	64155739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
transcript_32948.known	chr15	-	2485	13	FSM	ENSG00000169118.18	ENST00000634654.1	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	11.7505910016854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCTGGTTATATTGG	57	False	NA	-4	True	TTTAAA	-32	NA	64356071	64171133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64171986_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_32952.known	chr15	-	8085	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	7.2590781009735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGAAGAAGAAAATTAT	-45	True	NA	1	True	AATAAA	-20	NA	64356173	64165524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_32959.known	chr15	-	372	4	FSM	ENSG00000259316.12	ENST00000634529.1	372	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	693.991514517449	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACAGATTTTATAAACAG	9540	False	NA	NA	False	AATAAA	-27	NA	64381416	64251544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64251582_64376742_64376906_64380957_64381039_64381325
transcript_32965.known	chr15	-	2132	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_2	142.323574997258	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	-1	True	NA	-18	True	AATAAA	-27	NA	64381441	64364303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
transcript_32968.known	chr15	-	911	3	FSM	ENSG00000166803.14	ENST00000380258.6	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	664.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAGTTGGAGACCA	-4	True	NA	NA	False	NA	NA	NA	64381444	64365364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64366076_64380957_64381039_64381325
transcript_32969.known	chr15	-	749	3	FSM	ENSG00000166803.14	ENST00000559519.5	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAGTATTAATTAAACA	-1	True	NA	-71	True	ATTAAA	-2	NA	64381441	64365605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64366076_64376742_64376906_64381325
transcript_32971.known	chr15	-	766	5	FSM	ENSG00000166803.14	ENST00000558008.3	766	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	723.822276183871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTGCTTAGA	2	True	NA	35	True	NA	NA	NA	64381438	64365733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64366076_64373697_64373765_64376742_64376906_64380957_64381039_64381325
transcript_32974.nnic	chr15	+	1916	13	NIC	ENSG00000103671.10	novel	761	6	NA	NA	4	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	43.7856997203425	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	NA	False	NA	14	True	TATAAA	-21	NA	64387756	64455303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_64387789_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_32977.known	chr15	+	2013	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_7	11.4041902630373	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	-11	True	NA	14	True	TATAAA	-21	NA	64387835	64455303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_32979.nnic	chr15	+	2095	13	NIC	ENSG00000103671.10	novel	2013	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	40.3130114093315	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	-9	True	NA	14	True	TATAAA	-21	NA	64387837	64455303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_64388049_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_32989.nic	chr15	+	1686	10	ISM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	30973	0	0	5prime_fragment	FALSE	canonical	3	140	junction_7	11.7861605388232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAGTGCAAATAAAA	-11	True	NA	NA	False	NA	NA	NA	64387835	64424330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030
transcript_32990.known	chr15	+	8746	9	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	38714	0	-3086	0	3prime_fragment	FALSE	canonical	3	19	junction_2	15.8936897855721	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTTAGTTTGCCTTT	NA	False	NA	50	True	AATAAA	-25	NA	64499291	64686068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_64500167_64622826_64623053_64670345_64670434_64673915_64676257_64678115_64678483_64680184_64680361_64680645_64680863_64681308_64681388_64681691
transcript_33.known	ERCC-00085	+	828	1	FSM	ERCC-00085A	DQ883669	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00085_+_0_800
transcript_330.known	chr1	-	1976	3	FSM	ENSG00000235098.9	ENST00000427211.3	1976	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	606	False	NA	-1	True	AATAAA	-17	NA	1421769	1418419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1419550_1420796_1421006_1421132
transcript_33006.known	chr15	-	1934	6	FSM	ENSG00000180304.14	ENST00000326005.10	1934	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	1118.04998099369	3918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTATTCTTTATTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	64703281	64687572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_33018.known	chr15	-	1744	5	FSM	ENSG00000180304.14	ENST00000560258.6	1744	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1415.90695315759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTCAATAAACTGATT	3	True	NA	-36	True	NA	NA	NA	64703208	64687603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64688835_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_33020.known	chr15	-	785	4	FSM	ENSG00000180304.14	ENST00000559753.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	1249.53546924002	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTTTATGAACTGGCA	10	True	NA	-42	True	AGTAAA	-3	NA	64703201	64688484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64703028
transcript_33026.known	chr15	-	707	3	FSM	ENSG00000180304.14	ENST00000560837.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	173.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATGCCTGCCGGTTAA	17	False	NA	NA	False	ATTAAA	-20	NA	64703194	64690166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64690550_64691433_64691592_64703028
transcript_33030.nnic	chr15	-	1769	8	NNC	ENSG00000166831.9	novel	2017	8	NA	NA	825	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_7	504.024375827768	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	1133	False	NA	-11	True	AATAAA	-16	NA	64774764	64739890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64774655
transcript_33031.known	chr15	-	2017	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_2	161.68046087444	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	-4	True	NA	-11	True	AATAAA	-16	NA	64775589	64739890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
transcript_33034.nnic	chr15	-	1715	8	NNC	ENSG00000166831.9	novel	2017	8	NA	NA	-1160	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_7	508.689071465636	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	NA	False	NA	-11	True	AATAAA	-16	NA	64776749	64739890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64776694
transcript_33040.known	chr15	+	3689	6	FSM	ENSG00000241839.10	ENST00000323544.5	3689	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.56971411425142	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTCAAGCCTGT	0	True	NA	16	True	AATAAA	-16	NA	64841914	64868002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64842029_64848592_64848743_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_33041.known	chr15	+	3569	5	FSM	ENSG00000241839.10	ENST00000616065.4	3569	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36.8196618669971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGTGCCTCAAGCCT	772	False	NA	14	True	AATAAA	-14	NA	64841882	64868000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_64842029_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_33042.known	chr15	-	1613	9	FSM	ENSG00000090487.11	ENST00000433215.6	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	255.313410341094	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-14	True	NA	-7	True	AATAAA	-12	NA	64989474	64963026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989405
transcript_33043.known	chr15	-	1799	9	FSM	ENSG00000090487.11	ENST00000204566.7	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	38.0441766240249	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTTTGTGATTATTGT	-1	True	NA	-2	True	AATAAA	-17	NA	64989914	64963021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
transcript_33044.known	chr15	-	1533	8	FSM	ENSG00000090487.11	ENST00000416889.6	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	264.167077619372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATTGGTTATTTTATGC	2	True	NA	41	True	NA	NA	NA	64989911	64963203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64980863_64981026_64983506_64983594_64989664
transcript_33046.known	chr15	-	2746	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	29.0850047275224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTGCAAACTCAT	-14	True	NA	-5	True	AATAAA	-13	NA	65029639	65001511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_33053.known	chr15	-	421	2	FSM	ENSG00000103707.10	ENST00000559633.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCTTTCTGTAATAT	93	False	NA	NA	False	TATAAA	-33	NA	65029532	65026747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65027041_65029404
transcript_33054.known	chr15	-	1111	8	FSM	ENSG00000103707.10	ENST00000560717.5	1111	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	80.714412136437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGGACTTTTTTTTT	-11	True	NA	-2	True	ATTAAA	-18	NA	65029598	65002995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65026817_65027041_65029404
transcript_33055.known	chr15	-	2823	5	FSM	ENSG00000090470.15	ENST00000204549.9	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.4373429638327	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCCTTTGCTGCCAA	-1	True	NA	0	True	AATAAA	-19	NA	65133808	65117378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65118841_65119375_65119464_65119717_65119955_65129031_65129171_65132911
transcript_33056.known	chr15	-	4695	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_8	30.1869912026658	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACGTGGTGGTGTGTCC	-11	True	NA	NA	False	AATAAA	-20	NA	65185342	65148218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_3306.known	chr1	+	1887	8	FSM	ENSG00000132773.12	ENST00000372090.6	1887	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	13.3950950511212	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	5	True	NA	27	True	NA	NA	NA	45340169	45343973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_33060.nic	chr15	-	1681	3	ISM	ENSG00000166855.9	ENST00000558958.1	1493	9	-8	21122	-8	-11157	5prime_fragment	FALSE	canonical	3	251	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAAAAATCATGTAT	-19	True	NA	NA	False	AAAAAG	-8	NA	65185350	65177807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_65179052_65180043_65180205_65185074
transcript_33066.known	chr15	-	7281	20	FSM	ENSG00000074603.19	ENST00000300141.11	7281	20	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_4	8.11960453712711	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTAAGTGTTCCTTTT	-14	True	NA	-3	True	AATAAA	-18	NA	65517689	65442466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
transcript_33068.known	chr15	-	561	3	FSM	ENSG00000074603.19	ENST00000560194.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	7	True	NA	1	True	AATAAA	-26	NA	65517628	65511960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65512109_65512294_65512565_65517485
transcript_33071.known	chr15	+	1465	12	FSM	ENSG00000074696.13	ENST00000565299.5	1465	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	753.022548585158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTTCCCCAGTAAC	-12	True	NA	39	True	ATTAAA	-16	NA	65530489	65576499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65535720_65535835_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_33073.known	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	TRUE	canonical	1	601	junction_6	426.511723168309	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	-39	True	NA	32	True	ATTAAA	-17	NA	65530462	65578349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_33080.known	chr15	+	1658	11	FSM	ENSG00000074696.13	ENST00000566074.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	649.746111954508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACAACATCTATTATTA	131	False	NA	NA	False	GGGGCT	-33	NA	65530753	65576955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530834_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_33089.known	chr15	+	1332	10	FSM	ENSG00000074696.13	ENST00000442729.6	1332	10	0	0	0	0	multi-exon	FALSE	canonical	1	52	junction_3	683.483885854101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTATCTCATGTTCAGTC	-20	True	NA	-39	True	NA	NA	NA	65530481	65576637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_3309.nic	chr1	+	1922	8	NIC	ENSG00000132773.12	novel	1887	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	28.4095413693415	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	-12	True	NA	27	True	NA	NA	NA	45340152	45343973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_45340323_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_33099.known	chr15	+	393	2	FSM	ENSG00000074696.13	ENST00000566239.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	2182	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAGGAAAAAAAAAAAAA	22	False	NA	NA	False	TTTAAA	-35	NA	65530587	65551937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65530719_65551675
transcript_331.known	chr1	-	1632	3	FSM	ENSG00000235098.9	ENST00000520296.5	1632	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	931	False	NA	-1	True	AATAAA	-17	NA	1421444	1418419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1419550_1420815_1421006_1421132
transcript_3310.known	chr1	+	2173	8	FSM	ENSG00000132773.12	ENST00000495703.5	2173	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	37.24053091535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATATTTGACCAGCT	6	True	NA	18	True	NA	NA	NA	45340220	45343964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45340543_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
transcript_33105.known	chr15	-	2419	12	FSM	ENSG00000138614.16	ENST00000567744.5	2419	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	85.4956380889189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCATTTTCAAGCTTCTG	14	True	NA	NA	False	NA	NA	NA	65611121	65579026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65610685
transcript_33106.nic	chr15	-	2347	12	NIC	ENSG00000138614.16	novel	2304	12	NA	NA	7	-22	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	83.0561892847992	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-15	True	NA	-11	True	AATAAA	-17	NA	65611216	65578781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65611097
transcript_33107.nic	chr15	-	2691	12	NIC	ENSG00000138614.16	novel	2304	12	NA	NA	0	-22	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	79.2801289288508	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	4	True	NA	-11	True	AATAAA	-17	NA	65611131	65578781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610685
transcript_33108.known	chr15	-	2615	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	64.9954861751222	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGGTCTGTCTT	-1	True	NA	18	True	ACTAAA	-5	NA	65611136	65578752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
transcript_33109.known	chr15	-	2393	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-114	25	-3	-22	multi-exon	FALSE	canonical	3	118	junction_11	55.8411264657034	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-2	True	NA	-11	True	AATAAA	-17	NA	65611245	65578781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
transcript_33110.known	chr15	-	1797	12	FSM	ENSG00000138614.16	ENST00000569491.5	1797	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	129.799018193386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACCGGCAGGGGCTC	4	True	NA	NA	False	NA	NA	NA	65611131	65579096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593570_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605233_65607301_65607426_65611097
transcript_33113.known	chr15	-	1980	12	FSM	ENSG00000138614.16	ENST00000431261.6	1980	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	85.7160409107974	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTCACCTCTTCCCTC	NA	False	NA	NA	False	GGGGCT	-14	NA	65611258	65579064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607301_65607443_65611097
transcript_33115.known	chr15	-	1741	11	FSM	ENSG00000138614.16	ENST00000420799.7	1741	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	87.9027303330221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTTGAATGACTGAT	1	True	NA	NA	False	NA	NA	NA	65611242	65579146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
transcript_33121.known	chr15	+	4895	5	FSM	ENSG00000103769.10	ENST00000261890.7	4895	5	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_4	77.9326632420579	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGTTTAATTTTTA	-6	True	NA	32	True	AATATA	-29	NA	65869490	65891989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_33124.known	chr15	+	635	5	FSM	ENSG00000103769.10	ENST00000567671.1	635	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	502.077185301224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCACTGAAAACAAGC	11	True	NA	NA	False	NA	NA	NA	65870012	65887791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65870086_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_33126.known	chr15	+	588	4	FSM	ENSG00000103769.10	ENST00000566233.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	590.610042432587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACGCGAAAATGACATG	7	False	NA	NA	False	NA	NA	NA	65869463	65887736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65887700
transcript_33128.known	chr15	+	3763	17	FSM	ENSG00000166938.13	ENST00000319194.9	3763	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	37.6583635298986	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	NA	False	NA	21	True	AATAAA	-18	NA	66293216	66333898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66293368_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_33129.known	chr15	+	3780	17	FSM	ENSG00000166938.13	ENST00000319212.9	3780	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	18.3591555837952	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	-8	True	NA	21	True	AATAAA	-18	NA	66293567	66333898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_33130.known	chr15	+	2399	12	FSM	ENSG00000166938.13	ENST00000564909.5	2399	12	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	16.6505155902599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTCCTTGGTTTTT	20	True	NA	NA	False	AAAACA	-16	NA	66293595	66326561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830
transcript_33133.known	chr15	-	1728	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	18.8593072350963	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGCTTTATGGGAGG	15	True	NA	-2	True	AGTAAA	-18	NA	66356685	66336190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
transcript_33135.nnic	chr15	-	1560	8	NNC	ENSG00000075131.10	novel	1728	8	NA	NA	21	147	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	73.3162008434865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATAATCTGGTATTTAT	36	False	NA	-4	True	AGTAAA	-25	NA	66356664	66336833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356142
transcript_33137.known	chr15	-	1009	8	FSM	ENSG00000075131.10	ENST00000562124.5	1009	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	76.7460694998348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATTACTGAAGCTAGA	-21	True	NA	-92	True	TTTAAA	-32	NA	66386724	66336980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66386606
transcript_33139.known	chr15	-	1459	7	FSM	ENSG00000075131.10	ENST00000566524.5	1459	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	75.5191292911199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCACCATGTTGGC	15	True	NA	NA	False	NA	NA	NA	66356685	66336383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66352128_66352208_66352814_66352956_66356638
transcript_33144.known	chr15	+	2547	11	FSM	ENSG00000169032.11	ENST00000307102.10	2547	11	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_5	46.8333214709356	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	0	True	NA	18	True	AATAAA	-36	NA	66386911	66491544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655_66444708_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_33147.nnic	chr15	+	1792	7	NNC	ENSG00000169032.11	novel	1526	5	NA	NA	-12384	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	185.396347201221	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	2996	False	NA	18	True	AATAAA	-36	NA	66472497	66491544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_66472747_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_33149.known	chr15	-	749	4	FSM	ENSG00000174446.13	ENST00000395589.6	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	154.572528822772	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCAAGTCACCTCTT	1	True	NA	NA	False	NA	NA	NA	66497750	66490305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66490718_66494414_66494553_66495329_66495420_66497641
transcript_33150.known	chr15	-	1069	3	FSM	ENSG00000174446.13	ENST00000565465.1	1069	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATAAATTTATAAGTA	-8	True	NA	-30	True	NA	NA	NA	66497759	66493843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66494553_66495329_66495420_66497489
transcript_33151.known	chr15	-	1296	3	FSM	ENSG00000174446.13	ENST00000316634.6	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	14	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCTGCTCTCGAACT	-11	True	NA	NA	False	AGTAAA	-20	NA	66497762	66493467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66494553_66495329_66495420_66497641
transcript_33152.known	chr15	-	794	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTTGAGACATCACT	-11	True	NA	-66	True	TATAAA	-24	NA	66497762	66493879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66494553_66497641
transcript_33155.known	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_15	54.2646691779067	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	8	True	NA	9	True	AATAAA	-19	NA	66505325	66550130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_33157.known	chr15	+	3256	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	114.020533671639	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	5517	False	NA	77	True	AATAAA	-24	NA	66505116	66549487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_33167.known	chr15	+	2206	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	138.421676603172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	5359	False	NA	NA	False	AAAACA	-22	NA	66504958	66548426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_33174.known	chr15	-	2552	12	FSM	ENSG00000188501.11	ENST00000537670.5	2552	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	9.68853800090815	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGCATTTTTCTCA	17	True	NA	NA	False	GATAAA	-16	NA	66565964	66547467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66548606_66550040_66550105_66551661_66551862_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
transcript_33186.known	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	8802	junction_7	641.677970078411	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-5	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_33187.known	chr15	-	2003	8	FSM	ENSG00000174444.15	ENST00000567229.5	2003	8	0	0	0	0	multi-exon	FALSE	canonical	3	9520	junction_7	488.186983247449	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGGTGTGCTCTGT	4	True	NA	-23	True	AATAAA	-27	NA	66504846	66499319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501505_66501787_66501913_66502611_66503165_66503357_66503530_66504787
transcript_33188.known	chr15	+	6464	9	FSM	ENSG00000166949.17	ENST00000327367.9	6464	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.61769203083567	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGCCAGGAGCTCA	1	True	NA	15	True	AATAAA	-15	NA	67065601	67195169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_67066361_67164894_67165089_67165252_67165385_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
transcript_33191.known	chr15	+	1000	6	FSM	ENSG00000103599.20	ENST00000512104.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.73563184232549	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGAATCTTTTATTTATT	6	True	NA	NA	False	AATAAA	-23	NA	67254799	67307224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_67254948_67261271_67261395_67263121_67263217_67279394_67279513_67304338_67304456_67306825
transcript_33199.known	chr15	-	2251	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	149.07045314213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACTGCAAATAAAAATCC	-20	True	NA	-53	True	TTTAAA	-13	NA	67254675	67201706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
transcript_332.known	chr1	-	634	2	FSM	ENSG00000225285.1	ENST00000417917.1	634	2	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCAGCTGTTGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	1434520	1430663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1430955_1434177
transcript_33200.known	chr15	-	3132	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_3	66.4632080529623	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTGGTTTTTGGTTGT	-6	True	NA	NA	False	TTTAAA	-5	NA	67254661	67200666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_33208.nnic	chr15	-	394	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	0	3466	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	13	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	-35	True	NA	-2	True	AATAAA	-18	NA	67521662	67514919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_67515067_67518999_67519103_67521518
transcript_33209.nnic	chr15	-	367	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	0	3466	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	7	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	-35	True	NA	-2	True	AATAAA	-18	NA	67521662	67514919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_67515067_67518999_67519103_67521545
transcript_3321.known	chr1	-	1017	8	FSM	ENSG00000132781.20	ENST00000467459.5	1017	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	92.0168573730723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGTAAAGTGCTTATT	7930	False	NA	-34	True	NA	NA	NA	45332488	45329271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331873_45332022_45332087_45332165_45332311_45332390
transcript_33210.known	chr15	+	2344	22	FSM	ENSG00000137764.20	ENST00000178640.10	2344	22	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	9.55494909218228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	-17	True	NA	20	True	AATAAA	-21	NA	67542702	67807114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_33211.nnic	chr15	+	1425	14	NNC	ENSG00000137764.20	novel	412	3	NA	NA	-3628	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	21.2561164187417	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTCTGCCATAAGAGT	NA	False	NA	17	True	AATAAA	-18	NA	67636924	67807111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_67637227_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_33212.known	chr15	-	107	1	FSM	ENSG00000206625.1	ENST00000383898.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGGTTGTTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	67840045	67839938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_67839900_67840000
transcript_33215.known	chr15	+	7980	14	FSM	ENSG00000033800.14	ENST00000249636.11	7980	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	16.2600901763914	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGAAATCATCTATTAT	-3	True	NA	NA	False	AATAAA	-39	NA	68054314	68193847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541
transcript_3322.known	chr1	-	1526	6	FSM	ENSG00000280670.3	ENST00000626657.2	1526	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.506519890914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACTAAAGCAATCCTC	-17	True	NA	NA	False	NA	NA	NA	45499974	45494391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45495167_45495417_45495474_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_33220.nic	chr15	+	1338	2	ISM	ENSG00000033800.14	ENST00000564915.5	671	5	6	54732	0	-54732	5prime_fragment	FALSE	canonical	3	182	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAACAAAAACAAAG	-3	True	NA	NA	False	AAGAAA	-37	NA	68054314	68087607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_68054351_68086305
transcript_33221.known	chr15	-	3857	5	FSM	ENSG00000129007.16	ENST00000467889.3	3857	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	32.2364312540951	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATAGCTATTTTATCA	-3	True	NA	NA	False	ATTAAA	-20	NA	68205332	68190704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68194113_68197439_68197629_68199540_68199682_68205120_68205152_68205244
transcript_33223.known	chr15	-	2440	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_4	227.435705200393	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGTTTACATATGGT	0	True	NA	-11	True	TATAAA	-18	NA	68820895	68778534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
transcript_3323.known	chr1	-	2229	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.44580418759451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	-10	True	NA	60	True	ATTAAA	-18	NA	45500079	45493865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_3324.known	chr1	-	2095	5	FSM	ENSG00000280670.3	ENST00000629482.3	2095	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	8.74642784226795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	-4	True	NA	60	True	ATTAAA	-18	NA	45500073	45493865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45495167_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_33243.known	chr15	-	707	3	FSM	ENSG00000140350.15	ENST00000495420.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	3081	junction_1	24	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTAGAACCCTAGTTTCAA	-2	True	NA	NA	False	NA	NA	NA	68820897	68787178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_68787536_68787769_68787920_68820697
transcript_33247.known	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.6183802907977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	0	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
transcript_33249.known	chr15	+	1308	3	FSM	ENSG00000138604.10	ENST00000559798.2	1308	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	3	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATATAATGATTTA	5	True	NA	79	True	AATAAA	-16	NA	69160583	69197458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69160758_69194435_69194526_69196414
transcript_33253.nnic	chr15	+	1223	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-57	-52	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGTTTC	NA	False	NA	27	True	AATAAA	-26	NA	69160526	69197406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_69160758_69196414
transcript_33254.nnic	chr15	+	1276	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-57	1	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAATATAATGATTTAA	NA	False	NA	80	True	AATAAA	-17	NA	69160526	69197459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_69160758_69196414
transcript_33255.known	chr15	+	571	4	FSM	ENSG00000259504.2	ENST00000558269.2	571	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGATGAAGCCTCCCCT	NA	False	NA	NA	False	AATAAA	-18	NA	69278674	69288574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69278870_69279654_69279755_69284223_69284333_69288407
transcript_33257.known	chr15	+	5372	9	FSM	ENSG00000137819.14	ENST00000395407.7	5372	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	14.8991400758567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCCACTGTCCTAGG	-17	True	NA	NA	False	AGTAAA	-34	NA	69298911	69407780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69299057_69337340_69337502_69359965_69360132_69379882_69380011_69384676_69384883_69389653_69389781_69397467_69397565_69399973_69400116_69403580
transcript_33260.nic	chr15	+	1577	8	NIC	ENSG00000137819.14	novel	5372	9	NA	NA	-14	-367	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	19.5594332374798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTGGAGCTTTGTATT	-31	True	NA	35	True	TTTAAA	-29	NA	69298897	69404137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_69299057_69337340_69337502_69379882_69380011_69384676_69384883_69389653_69389781_69397467_69397565_69399973_69400116_69403580
transcript_33263.known	chr15	+	3660	24	FSM	ENSG00000137807.16	ENST00000679126.1	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	103.833333080476	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	11	True	NA	NA	False	ATTAAA	-21	NA	69414348	69448425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_33265.nic	chr15	+	3424	23	NIC	ENSG00000137807.16	novel	3660	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	101.08040331283	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	69414272	69448425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_33266.known	chr15	+	3620	23	FSM	ENSG00000137807.16	ENST00000647715.1	3620	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	65.6677084561681	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	11	True	NA	NA	False	ATTAAA	-23	NA	69414348	69448427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_33267.known	chr15	+	3351	22	FSM	ENSG00000137807.16	ENST00000352331.8	3351	22	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_17	55.4347075641343	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	13	False	NA	NA	False	ATTAAA	-21	NA	69414303	69448425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_33277.nic	chr15	+	1903	16	ISM	ENSG00000137807.16	ENST00000559279.6	3129	22	-86	10036	0	0	5prime_fragment	FALSE	canonical	3	79	junction_7	108.03324591172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGAACGACTGGAAAA	NA	False	NA	48	True	ACTAAA	-35	NA	69414272	69438360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247
transcript_33279.known	chr15	+	3723	23	FSM	ENSG00000137807.16	ENST00000260363.9	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	65.6677084561681	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	69414245	69448427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_3329.known	chr1	-	1234	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3249.31176712854	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	3238	False	NA	-20	True	ATTAAA	-28	NA	45521938	45511035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
transcript_33291.known	chr15	+	445	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	1029	junction_1	9844	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	-8	True	NA	51	True	AATAAA	-15	NA	69452813	69455547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69455169_69455288_69455427
transcript_33292.known	chr15	+	256	2	FSM	ENSG00000137818.12	ENST00000560274.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	2	False	NA	50	True	AATAAA	-14	NA	69452883	69455546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69455427
transcript_33293.known	chr15	+	1174	4	FSM	ENSG00000137818.12	ENST00000260379.11	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	20717	junction_3	1695.3651196391	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGCCAGGCACATGAA	-4	True	NA	78	True	AATAAA	-31	NA	69452817	69456205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427
transcript_33294.known	chr15	+	1962	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	20717	junction_2	1435.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	-3	True	NA	50	True	AATAAA	-14	NA	69452818	69455546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_69453021_69453646_69455288_69455427
transcript_33295.known	chr15	-	6904	19	FSM	ENSG00000137831.15	ENST00000322954.11	6904	19	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_10	28.0123429585012	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAAATCTTTAATATT	-4	True	NA	NA	False	AATAAA	-22	NA	70763558	70654553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723_70669463_70671038_70671092_70671964_70672002_70676492_70676592_70677107_70677141_70678098_70678207_70679607_70679677_70682757_70682796_70684264_70684447_70687539_70687647_70687749_70687821_70690453_70690512_70691298_70691364_70695016_70695106_70699526_70699661_70763329
transcript_333.known	chr1	-	424	2	FSM	ENSG00000225285.1	ENST00000454562.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGAAGGCGGCCGCGG	NA	False	NA	NA	False	NA	NA	NA	1434488	1430549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1430663_1434177
transcript_33307.known	chr15	+	6176	16	FSM	ENSG00000137821.12	ENST00000260382.10	6176	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	11.5727649630021	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATAGTGTACTTGCGG	-17	True	NA	NA	False	AATAAA	-22	NA	70892825	71053658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_33309.known	chr15	+	2586	16	FSM	ENSG00000137821.12	ENST00000560369.5	2586	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19.2141151818714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGATGGCGTGGCACTGC	17	False	NA	NA	False	ACTAAA	-8	NA	70892625	71049853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_70892943_70893583_70893656_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_3331.known	chr1	-	1107	6	FSM	ENSG00000117450.15	ENST00000447184.6	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_5	3053.83421946903	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	3238	False	NA	NA	False	NA	NA	NA	45521938	45510913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521857
transcript_33310.nic	chr15	+	1944	15	ISM	ENSG00000137821.12	ENST00000260382.10	6176	16	-17	16325	13	-12296	5prime_fragment	FALSE	canonical	3	41	junction_6	11.9488706664723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTACTGTTAATCTTT	112	False	NA	14	True	ATTAAA	-39	NA	70892808	71037333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_70892943_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178
transcript_33312.known	chr15	+	2721	15	FSM	ENSG00000137821.12	ENST00000560107.6	2721	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	19.3126795612814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTATGTTTGCCTCCTT	-14	True	NA	14	True	AATAAA	-23	NA	70892594	71050075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_33318.known	chr15	-	4467	3	FSM	ENSG00000166173.11	ENST00000299213.10	4467	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTATGGGCCAGGCAT	9	True	NA	NA	False	AATAAA	-17	NA	70854157	70829129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70833117_70836294_70836506_70853888
transcript_33319.known	chr15	-	527	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	625	False	NA	-3	True	AATAAA	-36	NA	70854121	70851426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70851721_70853888
transcript_3332.known	chr1	-	1296	6	FSM	ENSG00000117450.15	ENST00000424390.2	1296	6	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_5	2988.67859764144	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	2129	False	NA	NA	False	NA	NA	NA	45523047	45510913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45522777
transcript_33320.known	chr15	-	2047	3	FSM	ENSG00000129028.9	ENST00000249861.9	2047	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAGCCTGAACAATGA	-21	True	NA	-15	True	AATAAA	-18	NA	70892433	70881341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_70882651_70882760_70882909_70891843
transcript_33322.known	chr15	-	555	1	FSM	ENSG00000212664.5	ENST00000498103.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	71341712	71341157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_71341200_71341700
transcript_33323.known	chr15	+	4178	2	FSM	ENSG00000166192.15	ENST00000340912.6	4178	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCTCCATCTCGTCTC	-6	True	NA	NA	False	AATAAA	-17	NA	72118402	72143692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72118465_72139576
transcript_33325.known	chr15	-	3284	12	FSM	ENSG00000175318.12	ENST00000309731.12	3284	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	4.61760912698193	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGGTATAGAAAGTTCAT	1	True	NA	0	True	AATAAA	-22	NA	72197787	72159805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72162013_72162272_72162378_72163265_72163477_72163612_72163758_72165353_72165411_72166631_72166704_72166993_72167093_72167735_72167840_72168490_72168567_72168938_72168997_72169846_72169940_72197730
transcript_33337.known	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	2	6951	junction_5	1806.36751520835	9483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	10	True	NA	-5	True	AATAAA	-17	NA	72231190	72199028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_33346.known	chr15	-	2279	10	FSM	ENSG00000067225.20	ENST00000389093.7	2279	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4065.73481126789	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	6	True	NA	-5	True	AATAAA	-17	NA	72231386	72199028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209845_72217483_72217501_72218943_72219111_72231115
transcript_33367.known	chr15	-	1892	15	FSM	ENSG00000213614.11	ENST00000683681.1	1892	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	132.020406585884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTGGCATTTTTCTA	-23	True	NA	-56	True	AATAAA	-2	NA	72376009	72343911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72345676_72345777_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_33370.known	chr15	-	4785	14	FSM	ENSG00000213614.11	ENST00000268097.10	4785	14	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_6	37.7420394051718	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTAGCCGAGCCACC	-28	True	NA	-12	True	AATAAA	-28	NA	72376014	72340923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_33371.known	chr15	-	1795	14	FSM	ENSG00000213614.11	ENST00000566304.5	1795	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	104.539282274471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCATTCAATAAAGAGTAAT	-7	True	NA	-70	True	NA	NA	NA	72375993	72343925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356651_72375719
transcript_33373.known	chr15	-	2261	14	FSM	ENSG00000213614.11	ENST00000683860.1	2261	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	105.896287322262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCATCCTGGCCAGGG	-23	True	NA	NA	False	NA	NA	NA	72376009	72344020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72346129_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_33375.known	chr15	-	1743	13	FSM	ENSG00000213614.11	ENST00000567411.5	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	107.288422281044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGCATTTTTCTATAAT	-17	True	NA	-52	True	AATAAA	-6	NA	72376003	72343907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72355558_72355625_72356524_72356618_72375719
transcript_33376.known	chr15	-	2163	13	FSM	ENSG00000213614.11	ENST00000684602.1	2163	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	158.38163736859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-3	True	NA	-34	True	TTTAAA	-10	NA	72375989	72343453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72355558_72355625_72356524_72356618_72362375_72362467_72375719
transcript_33379.known	chr15	-	2075	12	FSM	ENSG00000213614.11	ENST00000684231.1	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	109.635986732354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-6	True	NA	-34	True	TTTAAA	-10	NA	72375992	72343453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72355558_72355625_72356524_72356618_72375719
transcript_33392.known	chr15	-	836	5	FSM	ENSG00000137817.17	ENST00000569972.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	34.5135842821345	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGACTGGATATG	NA	False	NA	-22	True	AATAAA	-15	NA	72250265	72241196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019
transcript_33394.known	chr15	-	2451	12	FSM	ENSG00000213614.11	ENST00000684520.1	2451	12	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	40.4391186111862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAACAACTATTTACAT	-23	True	NA	-13	True	AATAAA	-7	NA	72376009	72345241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_33395.known	chr15	+	21679	14	FSM	ENSG00000166233.15	ENST00000379887.9	21679	14	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	20.7333022571226	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCCCTTTTGTTGA	5	True	NA	NA	False	GATAAA	-6	NA	72474329	72602987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72475015_72518066_72518135_72544819_72544965_72555270_72555364_72555851_72555908_72561482_72561550_72563393_72563501_72566562_72566606_72567105_72567178_72570176_72570308_72572107_72572166_72580730_72580992_72582074_72582188_72583207
transcript_334.known	chr1	+	2481	16	FSM	ENSG00000197785.14	ENST00000378756.8	2481	16	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_14	92.7102055990721	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	5	True	NA	30	True	AATAAA	-18	NA	1512161	1534685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1512474_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_33401.known	chr15	+	2467	16	FSM	ENSG00000140463.14	ENST00000268057.9	2467	16	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_6	28.4250280953638	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	-5	True	NA	15	True	AATAAA	-17	NA	72686206	72738473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_33404.known	chr15	+	1864	16	FSM	ENSG00000140463.14	ENST00000562084.5	1864	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	83.6799192691346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGAGAGAAATAAGAA	8	True	NA	NA	False	NA	NA	NA	72686219	72737570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72686565_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_33407.nic	chr15	+	3132	15	NIC	ENSG00000140463.14	novel	2467	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	265	junction_6	29.0384157941981	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	-5	True	NA	15	True	AATAAA	-17	NA	72686183	72738473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735967_72736761_72736964_72737477
transcript_33412.known	chr15	+	2055	15	FSM	ENSG00000140463.14	ENST00000566400.5	2055	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	110.674670331839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAGAAAAAAAACAA	-3	True	NA	3	True	NA	NA	NA	72686185	72738087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_72686252_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722788_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_33420.known	chr15	-	2716	7	FSM	ENSG00000159322.18	ENST00000567941.5	2716	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	86.0982965375429	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	3	True	NA	-12	True	ATTAAA	-19	NA	72783731	72751368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783245
transcript_33424.known	chr15	-	2420	9	FSM	ENSG00000156642.17	ENST00000345330.9	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	469.660249542156	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	-18	True	NA	-13	True	AATAAA	-17	NA	73633389	73560013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73597021_73597370_73633124
transcript_33426.known	chr15	-	2817	8	FSM	ENSG00000156642.17	ENST00000351217.10	2817	8	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	89.5001995209269	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	NA	False	NA	-13	True	AATAAA	-17	NA	73634134	73560013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73633124
transcript_33429.known	chr15	-	858	6	FSM	ENSG00000156642.17	ENST00000565325.5	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	428.590900510032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTAAAATATTTAAAT	-2	True	NA	NA	False	NA	NA	NA	73633245	73560816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73633124
transcript_33431.known	chr15	+	3295	10	FSM	ENSG00000103855.18	ENST00000318443.10	3295	10	0	0	0	0	multi-exon	TRUE	canonical	3	636	junction_1	109.778677459201	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	-14	True	NA	18	True	AATAAA	-15	NA	73684382	73714514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_33432.known	chr15	+	2690	9	FSM	ENSG00000103855.18	ENST00000561213.5	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	116.04625963382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	73684390	73712154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134
transcript_33439.nnic	chr15	+	1231	3	NIC	ENSG00000260469.3	novel	1224	2	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	NA	False	NA	44	True	NA	NA	NA	73752293	73770489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_73752397_73768752_73768861_73769469
transcript_33440.nnic	chr15	+	1277	3	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTTGTGTTTCCTTTT	NA	False	NA	40	True	NA	NA	NA	73752293	73770485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_73752397_73768752_73768911_73769469
transcript_33441.nnic	chr15	+	1405	3	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73752293	73770613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_73752397_73768752_73768911_73769469
transcript_33443.known	chr15	-	7150	3	FSM	ENSG00000205363.7	ENST00000569673.3	7150	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGAGCCCCATTTGCAG	-18	True	NA	-36	True	AATAAA	-16	NA	73753351	73735457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73740643_73750974_73751698_73752109
transcript_33444.known	chr15	+	1224	2	FSM	ENSG00000260469.3	ENST00000615095.1	1224	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73752316	73770613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73752397_73769469
transcript_33446.nnic	chr15	+	1236	2	NIC	ENSG00000260469.3	novel	1193	3	NA	NA	-151	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	NA	False	NA	44	True	NA	NA	NA	73767970	73770489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_73768187_73769469
transcript_33447.nnic	chr15	+	1360	2	NIC	ENSG00000260469.3	novel	1193	3	NA	NA	-151	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73767970	73770613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_73768187_73769469
transcript_33448.known	chr15	+	2346	7	FSM	ENSG00000129038.16	ENST00000261921.8	2346	7	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_2	14.4990421139544	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGCTCTGCATGCGG	2	True	NA	11	True	AATAAA	-15	NA	73926461	73952136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_73927886_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_3345.known	chr1	+	5049	4	FSM	ENSG00000132763.15	ENST00000401061.9	5049	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAAGCTTTTCCATTA	-22	True	NA	NA	False	AATAAA	-17	NA	45500299	45513382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45500414_45507355_45507551_45508211_45508365_45508795
transcript_33451.known	chr15	-	533	3	FSM	ENSG00000261801.7	ENST00000562130.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATCAAGAAATAGGACAT	-24	True	NA	NA	False	NA	NA	NA	73926342	73919154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73919384_73919837_73920039_73926239
transcript_33452.known	chr15	-	588	3	FSM	ENSG00000261801.7	ENST00000565416.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACCTGGATCAAGAAATA	-1	True	NA	NA	False	NA	NA	NA	73927940	73919160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73919384_73919837_73920039_73927776
transcript_33453.known	chr15	-	6280	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.13160143944688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTCTTTGTTTGGACA	-3	True	NA	NA	False	AATAAA	-20	NA	73992295	73978925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_33454.known	chr15	-	1891	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	7.2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	2237	False	NA	-10	True	AATAAA	-20	NA	73992348	73983217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_33458.known	chr15	+	1346	5	FSM	ENSG00000140481.15	ENST00000560148.5	1346	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	NA	False	NA	6	True	AATAAA	-18	NA	74202704	74221557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74218496_74218862_74221249
transcript_33459.known	chr15	+	820	4	FSM	ENSG00000140481.15	ENST00000561332.1	820	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCGAGTCGGGTGTAT	25	False	NA	NA	False	NA	NA	NA	74203049	74212973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74212481
transcript_33461.known	chr15	-	2565	19	FSM	ENSG00000137868.19	ENST00000563965.5	2565	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	17.7239636901256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGGTCCTCCGGATCA	5	True	NA	NA	False	NA	NA	NA	74202858	74179974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202417
transcript_33462.known	chr15	-	2708	19	FSM	ENSG00000137868.19	ENST00000395105.9	2708	19	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	12.2075669712693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-18	True	NA	-10	True	AATAAA	-16	NA	74202787	74179465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_33463.known	chr15	-	2864	19	FSM	ENSG00000137868.19	ENST00000323940.9	2864	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	18.5738432835261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-1	True	NA	-10	True	AATAAA	-16	NA	74209030	74179465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_33465.known	chr15	-	1889	6	FSM	ENSG00000137868.19	ENST00000432245.6	1889	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	30.009331881933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	3280	False	NA	NA	False	AATAAA	-20	NA	74208978	74194386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_33466.known	chr15	-	612	2	FSM	ENSG00000277749.1	ENST00000611006.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTAAACTGCATGT	5	True	NA	-16	True	AATAAA	-15	NA	74319688	74311515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74311959_74319519
transcript_33469.nnic	chr15	-	1568	9	NNC	ENSG00000140459.18	novel	1837	9	NA	NA	5265	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	14.4481832767999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTGCGTTCCATCA	NA	False	NA	-21	True	AATAAA	-14	NA	74354338	74337761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74354277
transcript_3347.known	chr1	-	945	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	7805	junction_5	167.765789122813	11514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	1	True	NA	-35	True	ATTAAA	-13	NA	45521884	45511050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
transcript_33470.known	chr15	-	2001	9	FSM	ENSG00000140459.18	ENST00000358632.8	2001	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	9.00607433902252	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCGTTCCATCAGAC	-6	True	NA	-18	True	AATAAA	-17	NA	74366206	74337758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74365715
transcript_33476.known	chr15	+	915	4	FSM	ENSG00000260266.1	ENST00000564109.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.23609564462324	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTGGTGGATGGCAA	11	False	NA	NA	False	AATACA	-33	NA	74350767	74361903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74350940_74354525_74354686_74356282_74356476_74361513
transcript_33486.known	chr15	-	1477	12	FSM	ENSG00000138629.16	ENST00000564488.5	1477	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	252.587796699133	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	35	True	NA	-7	True	AATATA	-17	NA	74461118	74445977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461036
transcript_33487.nnic	chr15	-	1461	12	NIC	ENSG00000138629.16	novel	1477	12	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_11	252.383317283404	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-19	True	NA	-6	True	AATATA	-18	NA	74461172	74445976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461107
transcript_33499.known	chr15	-	1720	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_10	186.135864357195	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	51	False	NA	-6	True	AATATA	-18	NA	74461102	74445976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
transcript_335.known	chr1	-	1284	5	FSM	ENSG00000160075.12	ENST00000291386.4	1284	5	0	0	0	0	multi-exon	FALSE	canonical	3	1597	junction_2	89.6730171233242	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCTGGTCCTGAATTC	-8	True	NA	-5	True	AATAAA	-16	NA	1574863	1541672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1542168_1543868_1543988_1544862_1545003_1564772_1564917_1574477
transcript_33502.known	chr15	-	1409	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_10	117.606802524344	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-7	True	NA	-6	True	AATATA	-18	NA	74461160	74445976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_33503.known	chr15	-	1360	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_10	135.672583818545	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-29	True	NA	-6	True	AATATA	-18	NA	74461182	74445976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_33504.nnic	chr15	-	1337	11	NNC	ENSG00000138629.16	novel	1360	11	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_10	202.626355640129	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	NA	False	NA	-6	True	AATATA	-18	NA	74461209	74445976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461157
transcript_33514.nnic	chr15	-	1255	10	NIC	ENSG00000138629.16	novel	1360	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	236.351172079196	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	NA	False	NA	-6	True	AATATA	-18	NA	74461200	74445976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_74446228_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_3352.known	chr1	+	1360	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	383.652910265979	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550782	45570048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_33537.known	chr15	+	1296	4	FSM	ENSG00000247240.9	ENST00000657781.2	1347	4	31	20	14	-5	multi-exon	FALSE	canonical	3	21	junction_1	15.5205956357638	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGTTTCCCTGTCA	14	False	NA	8	True	AATAAA	-13	NA	74461278	74481283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462028_74466035_74466131_74479059_74479279_74481050
transcript_33539.known	chr15	+	1344	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	42	5	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.8012344973464	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	6	True	NA	13	True	AATAAA	-18	NA	74461306	74481288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
transcript_3354.known	chr1	+	1818	10	FSM	ENSG00000117448.14	ENST00000372070.7	1818	10	0	0	0	0	multi-exon	TRUE	canonical	3	398	junction_2	428.298816882804	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550542	45570049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_33541.nnic	chr15	+	1212	3	FSM	ENSG00000247240.9	ENST00000693152.1	1189	3	-27	4	14	-1	multi-exon	FALSE	canonical	2	2	junction_1	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	14	False	NA	15	True	AATAAA	-20	NA	74461278	74481290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74462032_74479059_74479279_74481050
transcript_33542.known	chr15	+	4243	9	FSM	ENSG00000179361.18	ENST00000622429.1	4243	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	274.407999154544	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGGTCTCTCTCAGTTG	NA	False	NA	25	True	AATAAA	-18	NA	74541205	74598129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593134_74593237_74595610
transcript_33544.known	chr15	+	4228	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_7	73.904393475625	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCTCTCAGTTGCT	3	True	NA	27	True	AATAAA	-20	NA	74541219	74598131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
transcript_33548.known	chr15	+	1854	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	32.9582016432262	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	-7	True	NA	12	True	AATAAA	-19	NA	74615835	74630201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_33550.nic	chr15	+	1769	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	61.5067182419034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	44	False	NA	19	True	AATAAA	-19	NA	74615886	74630116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_33552.nic	chr15	+	2467	12	ISM	ENSG00000179335.20	ENST00000395066.9	1854	13	-22	83	18	0	intron_retention	FALSE	canonical	3	146	junction_3	34.2817687615661	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	-29	True	NA	21	True	AATAAA	-21	NA	74615813	74630118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
transcript_33553.nic	chr15	+	1694	12	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	18	0	combination_of_known_junctions	TRUE	canonical	3	52	junction_3	54.6314473661674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	-29	True	NA	19	True	AATAAA	-19	NA	74615813	74630116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_33554.nic	chr15	+	1779	12	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	54.6314473661674	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	-29	True	NA	12	True	AATAAA	-19	NA	74615813	74630201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_33556.nic	chr15	+	2370	11	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	52	junction_3	57.0316578752538	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	-29	True	NA	21	True	AATAAA	-21	NA	74615813	74630118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
transcript_33560.known	chr15	-	3810	9	FSM	ENSG00000179151.13	ENST00000647659.1	3810	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	131.344430315868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGACTGACTGAGTC	83	False	NA	-19	True	AATAAA	-1	NA	74695936	74630574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
transcript_33562.known	chr15	-	1825	8	FSM	ENSG00000179151.13	ENST00000568176.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	109.361411692365	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGGACCTTGTTAAA	19	True	NA	-37	True	NA	NA	NA	74696000	74632541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74687090_74687180_74695879
transcript_33567.known	chr15	-	3744	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	44.4800204836084	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCGTGTGACTTG	-5	True	NA	-2	True	AATAAA	-18	NA	74696024	74630557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_33577.known	chr15	-	2453	9	FSM	ENSG00000140497.16	ENST00000268099.13	2453	9	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	13.4158255429921	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGTCCACATGTCTGGT	-17	True	NA	-7	True	AATAAA	-16	NA	74873365	74843729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_33586.known	chr15	-	638	6	FSM	ENSG00000140497.16	ENST00000562363.5	638	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	183.788574182401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTTCTTCTTTGTA	38	False	NA	NA	False	NA	NA	NA	74873310	74848681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74873198
transcript_33588.known	chr15	+	5793	8	FSM	ENSG00000178802.18	ENST00000352410.9	5793	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	28.8118456364668	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTCCATTCAACA	-7	True	NA	NA	False	AATAAA	-14	NA	74890041	74902219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_33593.known	chr15	+	2809	7	FSM	ENSG00000178802.18	ENST00000566377.5	2809	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	42.4486618032758	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCTAAAGGGAACCCA	-10	True	NA	6	True	AATAAA	-19	NA	74890038	74899441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897511
transcript_33594.known	chr15	+	1619	7	FSM	ENSG00000178802.18	ENST00000323744.10	1619	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	52.8519946012762	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	-7	True	NA	18	True	ATTAAA	-17	NA	74890041	74898228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74896151_74896326_74897010_74897220_74897511
transcript_33595.known	chr15	+	1523	7	FSM	ENSG00000178802.18	ENST00000535694.5	1523	7	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	46.8997157063167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACCAGGTAATTTCTA	-7	True	NA	NA	False	NA	NA	NA	74890041	74898077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_33598.known	chr15	+	1481	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	22.8508205541945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	-7	True	NA	NA	False	AATACA	-39	NA	74890041	74896930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_336.known	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1754	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-2	True	NA	-5	True	AATAAA	-31	NA	1574584	1560847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1564917_1574477
transcript_33603.known	chr15	+	851	6	FSM	ENSG00000178802.18	ENST00000561470.5	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	57.6804993043576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTACAGCTGCACC	-7	True	NA	NA	False	NA	NA	NA	74890041	74896188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_33605.known	chr15	+	1148	5	FSM	ENSG00000178802.18	ENST00000565576.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	24.2834820402676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGGTGTGGTCACTG	13	True	NA	10	True	NA	NA	NA	74890061	74893786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137
transcript_33608.known	chr15	-	587	5	FSM	ENSG00000178761.15	ENST00000562698.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.9872347679497	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCATCCCCCCTAAGCC	1	True	NA	NA	False	NA	NA	NA	74906883	74902708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74902784_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_33610.known	chr15	+	1052	6	FSM	ENSG00000178802.18	ENST00000562606.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.1993464017386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTACTCTGATTT	4	True	NA	NA	False	NA	NA	NA	74890052	74896538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_74890090_74890552_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_33611.known	chr15	-	1173	5	FSM	ENSG00000178741.12	ENST00000322347.11	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	3850	junction_2	110.338966371813	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGTCTTAGAAGCG	5	True	NA	38	True	ATTAAA	-18	NA	74938073	74919790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937914
transcript_33613.known	chr15	-	2355	1	FSM	ENSG00000178718.7	ENST00000322177.6	2355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACGTTCTGTGGCTGACT	-3	True	NA	-1	True	AATAAA	-18	NA	74956772	74954417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_74954400_74956800
transcript_33614.known	chr15	+	2215	6	FSM	ENSG00000138621.12	ENST00000342932.8	2215	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	37.2397636942019	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGAACCAACTTCTT	-9	True	NA	NA	False	AATAAA	-18	NA	75023589	75050726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_33615.known	chr15	+	926	5	FSM	ENSG00000138621.12	ENST00000568649.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	50.0118735901786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGTCCTGGCTGAG	6	True	NA	NA	False	NA	NA	NA	75023604	75049581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75048552_75048722_75049149
transcript_33617.known	chr15	+	464	5	FSM	ENSG00000138621.12	ENST00000569562.5	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	42.4882336653337	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACAAAGTGAAAGAAGTC	-9	True	NA	NA	False	NA	NA	NA	75023589	75049182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_33618.known	chr15	+	1127	4	FSM	ENSG00000138621.12	ENST00000568207.5	1127	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	29.4882274061286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGGTGTGATTTCT	-13	True	NA	NA	False	NA	NA	NA	75023585	75045168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385
transcript_33620.known	chr15	+	757	4	FSM	ENSG00000138621.12	ENST00000564923.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	53.0722777603022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGTTGTCCTCAC	-12	True	NA	NA	False	NA	NA	NA	75023586	75049490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75023627_75028246_75028454_75048552_75048722_75049149
transcript_33622.nnic	chr15	+	924	4	NIC	ENSG00000138621.12	novel	2215	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	58.0937938930562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAGACTCCATTCTTT	-9	True	NA	12	True	AATAAA	-13	NA	75023589	75049738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75023627_75044385_75044515_75048552_75048722_75049149
transcript_33623.nic	chr15	+	1263	3	ISM	ENSG00000138621.12	ENST00000569562.5	464	5	-31	3698	-27	316	5prime_fragment	FALSE	canonical	3	26	junction_1	39.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCGAGTAGCTGGGAG	-3	True	NA	NA	False	AATAAA	-36	NA	75023558	75045484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_75023627_75043440_75043537_75044385
transcript_33625.nnic	chr15	+	820	3	NIC	ENSG00000138621.12	novel	926	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	63.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAGACTCCATTCTTT	3	True	NA	12	True	AATAAA	-13	NA	75023564	75049738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75023627_75048552_75048722_75049149
transcript_33628.known	chr15	+	895	8	FSM	ENSG00000140365.16	ENST00000267935.13	895	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	175.153693442447	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	-1	True	NA	NA	False	AATAAA	-17	NA	75336062	75340273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33630.known	chr15	+	850	8	FSM	ENSG00000140365.16	ENST00000562610.5	850	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	299.617783728754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	18	False	NA	NA	False	AATAAA	-15	NA	75336053	75340271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75339036_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33633.nnic	chr15	+	1012	8	NIC	ENSG00000140365.16	novel	895	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	257.188011908385	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	0	True	NA	NA	False	AATAAA	-17	NA	75336083	75340273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75336231_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33641.known	chr15	+	722	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	313.144624024676	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	-5	True	NA	NA	False	AATAAA	-17	NA	75336058	75340273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_33647.known	chr15	+	639	7	FSM	ENSG00000140365.16	ENST00000564815.5	639	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	311.649197371375	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGGAGGCAGCCCTGGTT	17	False	NA	NA	False	NA	NA	NA	75336052	75340073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_33657.known	chr15	+	677	6	FSM	ENSG00000140365.16	ENST00000567195.5	677	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	342.760207725459	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTGCAGGGGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	75336019	75340270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339964
transcript_33669.known	chr15	+	746	6	FSM	ENSG00000140365.16	ENST00000562789.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	390.160274758976	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	15	False	NA	NA	False	AATAAA	-15	NA	75336098	75340271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_3367.known	chr1	+	1407	9	FSM	ENSG00000117448.14	ENST00000351829.9	1407	9	0	0	0	0	multi-exon	FALSE	canonical	3	916	junction_1	211.735684285857	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	-7	True	NA	27	True	AATAAA	-17	NA	45550825	45570049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_33670.known	chr15	+	536	5	FSM	ENSG00000140365.16	ENST00000565517.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	364.811595210459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCAGAAGCACTTGCG	-1	True	NA	NA	False	NA	NA	NA	75336062	75339307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338139_75338354_75338421_75338645_75338686_75338984
transcript_33677.known	chr15	+	976	4	FSM	ENSG00000140365.16	ENST00000567399.5	976	4	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	249.605466464356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCCTGTTCTGAGCCT	0	True	NA	NA	False	NA	NA	NA	75336083	75339552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338421_75338645_75338686_75338984
transcript_33679.known	chr15	+	490	3	FSM	ENSG00000140365.16	ENST00000566230.5	490	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	250.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGGGGCCCCCCACCC	-1	True	NA	NA	False	NA	NA	NA	75336062	75338746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061_75338421_75338645
transcript_33682.known	chr15	+	2284	2	FSM	ENSG00000140365.16	ENST00000566843.1	2284	2	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	75336020	75340273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75336093_75338061
transcript_33683.known	chr15	-	3177	26	FSM	ENSG00000140400.18	ENST00000569482.5	3177	26	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_3	33.0901798121437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	8	True	NA	-5	True	AATAAA	-16	NA	75368592	75355791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75356033_75356109_75356220_75356300_75356381_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_33684.known	chr15	-	3261	26	FSM	ENSG00000140400.18	ENST00000267978.10	3261	26	0	0	0	0	multi-exon	FALSE	canonical	2	119	junction_9	23.1428952380639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-7	True	NA	-5	True	AATAAA	-16	NA	75368607	75355791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_33688.known	chr15	-	6723	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_20	40.2807646402101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTATTTTTTTTTGT	3	True	NA	-9	True	ATTAAA	-14	NA	75451690	75369378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_33693.known	chr15	+	1797	10	FSM	ENSG00000140398.14	ENST00000569035.5	1797	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9.39398283904367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	14	False	NA	21	True	AATAAA	-15	NA	75347637	75355247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75348027_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_33694.nic	chr15	+	1757	10	NIC	ENSG00000140398.14	novel	1797	10	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	10.7955180457699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	27	False	NA	21	True	AATAAA	-15	NA	75347650	75355247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_75348000_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_33701.known	chr15	-	1152	5	FSM	ENSG00000140400.18	ENST00000561693.5	1152	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.5116951065759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCTGCTCAGTCCCC	NA	False	NA	-7	True	AATAAA	-14	NA	75357367	75355793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75356033_75356109_75356212_75356293_75356450_75356605_75356686_75356792
transcript_33703.known	chr15	-	4078	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATTGTCATGATATTT	-4	True	NA	NA	False	ATTAAA	-20	NA	75451664	75419209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75422824_75430186_75430409_75451422
transcript_33705.known	chr15	+	1430	1	FSM	ENSG00000260274.1	ENST00000563278.1	1430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAGGTAAAACTTACTC	48	False	NA	NA	False	AATAAA	-23	NA	75368154	75369584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75368200_75369600
transcript_33708.nic	chr15	-	1858	10	NIC	ENSG00000169371.14	novel	1641	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	100.394776313866	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	31	True	NA	NA	False	AATATA	-17	NA	75625684	75598085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625335
transcript_33709.known	chr15	-	1641	10	FSM	ENSG00000169371.14	ENST00000567134.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	102.292608617523	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTGGTTCTTAAGC	-6	True	NA	NA	False	AATATA	-20	NA	75625794	75598082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625665
transcript_33711.known	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	73.6355043440323	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	22	True	NA	NA	False	NA	NA	NA	75625693	75598121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
transcript_33712.known	chr15	-	1420	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_8	44.5897970392331	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	-10	True	NA	NA	False	AATATA	-17	NA	75625725	75598085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
transcript_33716.known	chr15	+	8002	2	FSM	ENSG00000173548.9	ENST00000308527.6	8002	2	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCTTTCTGTTGGT	-6	True	NA	9	True	ATTAAA	-16	NA	75647911	75662301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75650574_75656961
transcript_33717.known	chr15	-	1132	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAATCTGTCTGGTTT	-14	True	NA	-25	True	AATAAA	-26	NA	75640224	75639092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_75639100_75640200
transcript_33718.known	chr15	+	1597	1	FSM	ENSG00000260288.5	ENST00000623240.1	1597	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTTAAAGATCCTT	-3	True	NA	NA	False	AATAAA	-15	NA	75758539	75760136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75758500_75760100
transcript_33719.known	chr15	+	2968	13	FSM	ENSG00000140367.12	ENST00000267938.9	2968	13	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_2	22.7370231609642	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTCATTTTTCC	0	True	NA	67	True	TTTAAA	-37	NA	75843446	75901078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75843847_75854385_75854488_75859877_75859983_75868950_75869011_75873427_75873569_75876186_75876272_75877960_75878022_75879097_75879189_75883365_75883425_75890434_75890484_75890918_75891015_75896994_75897062_75899426
transcript_33725.known	chr15	+	10707	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	212.144146487451	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	-1	True	NA	8	True	AATAAA	-15	NA	75903877	75942511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_3373.nic	chr1	+	1229	8	NIC	ENSG00000117448.14	novel	1407	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	253	junction_5	443.662493527755	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	-29	True	NA	27	True	AATAAA	-17	NA	45550803	45570049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568926_45569000_45569142_45569230_45569890
transcript_33731.known	chr15	+	1486	6	FSM	ENSG00000167196.14	ENST00000453211.6	1486	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	224.066954279296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGGAGCCATTACTT	-1	True	NA	NA	False	GATAAA	-15	NA	75903877	75930655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883
transcript_33738.known	chr15	+	2164	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	204.713849067424	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGTGCAGGTATGAC	-1	True	NA	21	True	AATAAA	-15	NA	75903877	75934107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_33741.nic	chr15	+	1695	5	ISM	ENSG00000167196.14	ENST00000453211.6	1486	6	-40	12320	-38	7906	5prime_fragment	FALSE	canonical	0	0	junction_2	244.698794439204	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAAGTCATTGGTGGAT	NA	False	NA	NA	False	NA	NA	NA	75903837	75918335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229
transcript_33760.known	chr15	-	2289	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	0	0	0	0	multi-exon	TRUE	canonical	3	732	junction_11	104.943274720636	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCATTTCAGTCTTC	23	False	76311492	1	True	TATAAA	-19	NA	76311469	76215352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_33765.known	chr15	-	1346	11	FSM	ENSG00000140374.17	ENST00000433983.6	1346	11	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_10	238.363189272169	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAAAAAGCACGGCTAT	27	True	NA	NA	False	NA	NA	NA	76311404	76216083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76311349
transcript_33766.known	chr15	-	917	11	FSM	ENSG00000140374.17	ENST00000688389.1	2477	11	334	1226	-4	-24	multi-exon	FALSE	canonical	3	16	junction_4	316.374919992088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGAGATATTGAAGAAAAA	35	True	NA	NA	False	NA	NA	NA	76311396	76216582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_33768.known	chr15	-	942	10	FSM	ENSG00000140374.17	ENST00000560726.5	942	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	328.465117376767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCTACATTTCATA	26	False	76311492	-106	True	NA	NA	NA	76311466	76216467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76311349
transcript_33771.known	chr15	-	792	9	FSM	ENSG00000140374.17	ENST00000559602.5	792	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	350.164604150677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATTGGAAAGCATGGA	17	True	NA	-121	True	NA	NA	NA	76311414	76216482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76311349
transcript_33783.nnic	chr15	-	2110	12	NNC	ENSG00000140386.13	novel	4707	31	NA	NA	16738	0	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_11	6.17111372671896	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACTTTTTAAGGTC	-16	False	NA	-6	True	AATAAA	-26	NA	76648920	76348187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_76348737_76351236_76351289_76353948_76354141_76376161_76376312_76381377_76381616_76404523_76404680_76434077_76434311_76471211_76471336_76504858_76504975_76574157_76574285_76621763_76621830_76648813
transcript_33784.known	chr15	+	6218	7	FSM	ENSG00000117906.14	ENST00000394885.8	6218	7	0	0	0	0	multi-exon	FALSE	canonical	3	1548	junction_4	106.020045274467	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGCCTGCTATAAAAT	6	True	NA	NA	False	AATAAA	-13	NA	76931748	76954393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76943757_76943872_76947420_76947518_76948409_76948553_76949069
transcript_33785.known	chr15	+	1052	10	FSM	ENSG00000140368.13	ENST00000557995.1	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	4.5242829047783	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTGCGTTCTGTTCTCC	NA	False	NA	-6	True	NA	NA	NA	77028342	77037313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_77028424_77028553_77028653_77029528_77029575_77030501_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
transcript_33794.known	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	592.531480645168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	9	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
transcript_33795.known	chr15	-	1340	7	FSM	ENSG00000140391.15	ENST00000558745.5	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	602.472244635017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGACTAAAATAGATTG	NA	False	NA	-36	True	TTTAAA	-38	NA	77083984	77046331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77083846
transcript_33796.nnic	chr15	-	2195	3	NNC	ENSG00000173517.11	novel	12003	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATGCTTGTCCTTT	-16	True	NA	-5	True	AATAAA	-25	NA	77420125	77108157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_77110151_77286422_77286505_77420005
transcript_33798.known	chr15	+	3805	10	FSM	ENSG00000140382.15	ENST00000336216.9	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	42.2479453806796	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	-17	True	NA	16	True	ATTAAA	-17	NA	77420887	77485603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_33800.nic	chr15	+	1658	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-204	5999	10	0	5prime_fragment	FALSE	canonical	3	267	junction_6	38.6795730974374	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	-28	True	NA	14	True	AATAAA	-16	NA	77420683	77479604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_33801.nic	chr15	+	2689	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-214	4978	0	1021	5prime_fragment	FALSE	canonical	3	267	junction_6	38.6795730974374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAAAATATAAAATT	859	False	NA	NA	False	NA	NA	NA	77420673	77480625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_33803.known	chr15	+	747	3	FSM	ENSG00000140382.15	ENST00000560986.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCTGGGCAGTCATG	30	False	NA	NA	False	NA	NA	NA	77420934	77464823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_77421005_77458403_77458497_77464239
transcript_33804.known	chr15	-	3477	2	FSM	ENSG00000169783.13	ENST00000355300.7	3477	2	0	0	0	0	multi-exon	TRUE	canonical	3	407	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGACTGTTCTCATTAT	-4	True	NA	-15	True	NA	NA	NA	77632912	77613026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_77615901_77632309
transcript_33806.known	chr15	-	6215	14	FSM	ENSG00000103740.10	ENST00000258873.9	6215	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	3.93437287770598	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTTCAAGTGCATT	-22	True	NA	NA	False	AAAAAG	-15	NA	78234565	78167467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78171530_78173592_78173840_78174384_78174525_78178613_78178832_78179549_78179781_78180754_78180937_78181968_78182146_78182465_78182616_78182704_78182786_78193505_78193627_78193931_78194021_78194505_78194727_78208001_78208103_78234370
transcript_33809.known	chr15	+	2110	12	FSM	ENSG00000166411.14	ENST00000560667.5	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	95.0964712435493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTCCAAGAGCTTTTA	-11	True	NA	NA	False	NA	NA	NA	78149359	78169715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78149431_78155212_78155276_78156907_78157163_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_33815.known	chr15	+	4083	11	FSM	ENSG00000166411.14	ENST00000299518.7	4083	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	17.5968747225182	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTAGGTTTCTGTCTTG	-9	True	NA	NA	False	AATAAA	-21	NA	78149361	78171945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_33829.known	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_10	64.7580882979107	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-3	True	NA	-6	True	CATAAA	-17	NA	78299609	78283234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_33830.known	chr15	-	1266	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	214.57607042725	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	1	True	NA	-6	True	CATAAA	-17	NA	78299605	78283234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
transcript_33837.known	chr15	-	884	9	FSM	ENSG00000140395.9	ENST00000558459.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_6	238.260361789367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTCTTAATGCAA	15	True	NA	-27	True	NA	NA	NA	78299591	78283255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78294945_78294974_78295674_78295726_78299561
transcript_33841.known	chr15	-	1131	2	FSM	ENSG00000140395.9	ENST00000561347.1	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATGATAGGTTGGGGA	6815	False	NA	NA	False	AAAAAG	-4	NA	78299703	78294736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78295726_78299561
transcript_33842.known	chr15	+	2961	8	FSM	ENSG00000140403.13	ENST00000343789.7	2961	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.76380914300945	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	42	True	NA	13	True	ATTAAA	-23	NA	78264561	78282196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_33845.known	chr15	+	738	4	FSM	ENSG00000166426.8	ENST00000299529.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	2742	junction_3	88.6052418815551	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCCCTTTTTTGGTTT	1	True	NA	30	True	ATTAAA	-20	NA	78340352	78348225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78340499_78341042_78341222_78343498_78343613_78347926
transcript_33846.known	chr15	+	583	4	FSM	ENSG00000166426.8	ENST00000406419.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_2	1287.72072541629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGATCCCGTTTTC	124	False	NA	NA	False	NA	NA	NA	78340475	78348078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78340499_78341042_78341337_78343498_78343613_78347926
transcript_33853.known	chr15	+	6324	22	FSM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	21.0416927661992	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTCTTGTTCTGTTTT	-19	True	NA	16	True	AATAAA	-19	NA	78438215	78501453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_33857.known	chr15	+	2917	21	FSM	ENSG00000136381.13	ENST00000558570.5	2917	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.0055552126624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTACCATGGAGCAGCAG	-9	True	NA	NA	False	NA	NA	NA	78438308	78498209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_33861.nic	chr15	+	2576	15	ISM	ENSG00000136381.13	ENST00000258886.13	6324	22	26	12588	14	109	intron_retention	FALSE	canonical	3	152	junction_6	19.8582990413662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGAATACAGTTTTT	7	True	NA	NA	False	AATAAA	-14	NA	78438241	78488865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179
transcript_33862.known	chr15	+	4396	8	FSM	ENSG00000136381.13	ENST00000560440.5	4396	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	21.6380239770792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCAAGAGTAGAGGAGC	-9	True	NA	NA	False	NA	NA	NA	78438283	78476700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241
transcript_33864.nic	chr15	+	1485	5	ISM	ENSG00000136381.13	ENST00000560440.5	4396	8	-68	9477	0	787	5prime_fragment	FALSE	canonical	3	164	junction_3	19.1882125274868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCGTATGTTAACGAT	-19	True	NA	NA	False	NA	NA	NA	78438215	78467223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270
transcript_33865.known	chr15	+	847	5	FSM	ENSG00000188266.14	ENST00000408962.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1.4790199457749	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGCCAGGTCCTG	-10	True	NA	9	True	AATAAA	-20	NA	78507563	78537372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78507672_78513083_78513426_78514967_78515108_78527379_78527564_78537299
transcript_33869.known	chr15	+	4378	9	FSM	ENSG00000041357.16	ENST00000044462.12	4378	9	0	0	0	0	multi-exon	FALSE	canonical	3	3263	junction_8	245.027932081222	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTACTCCTGTGTATAA	4	True	NA	NA	False	AATAAA	-14	NA	78540443	78552417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33872.known	chr15	+	944	9	FSM	ENSG00000041357.16	ENST00000560217.5	944	9	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	1208.75250129007	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTGGGAAAATAGGACA	NA	False	NA	NA	False	NA	NA	NA	78540404	78549037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542575_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33873.known	chr15	+	1094	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1238.37562455824	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGAAGGAATAAATT	-19	True	NA	10	True	AATAAA	-11	NA	78540420	78549186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33874.known	chr15	+	786	9	FSM	ENSG00000041357.16	ENST00000559365.5	786	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1254.26990092842	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGTAATCAGAGTTC	-1	True	NA	NA	False	NA	NA	NA	78540734	78548820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540836_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33877.known	chr15	+	773	8	FSM	ENSG00000041357.16	ENST00000558281.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	1316.00910300183	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCATTTCAGTGTAAAA	38	False	NA	NA	False	GATAAA	-30	NA	78540477	78548970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78548789
transcript_33879.known	chr15	+	1019	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1337.87682847236	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	-13	True	NA	28	True	AATAAA	-29	NA	78540426	78549204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_33887.known	chr15	+	2359	13	FSM	ENSG00000185787.15	ENST00000331268.9	2359	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	2950.83075402316	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAACGTTTCTCCCCTTT	-29	True	NA	NA	False	ATTAAA	-20	NA	78872813	78898133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78884966_78885084_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_33897.known	chr15	+	2172	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	0	0	0	0	multi-exon	FALSE	canonical	3	6761	junction_6	612.367739135468	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	1	True	NA	NA	False	ATTAAA	-26	NA	78872889	78898139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_339.known	chr1	+	2101	1	FSM	ENSG00000215014.5	ENST00000366221.3	2101	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTAACCATGTGCCT	4	True	NA	NA	False	AATAAA	-25	NA	1574974	1577075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1575000_1577100
transcript_33907.known	chr15	+	1468	12	FSM	ENSG00000185787.15	ENST00000559345.5	1468	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	2326.4949872329	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGTTAATGCTATAT	6	True	NA	NA	False	NA	NA	NA	78873004	78897389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873219_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_3392.known	chr1	+	1018	4	FSM	ENSG00000117448.14	ENST00000471651.1	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	916	junction_1	257.638420185258	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAAGGCGGGCGGATCA	10	True	NA	NA	False	NA	NA	NA	45551067	45567588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868
transcript_3393.known	chr1	+	775	3	FSM	ENSG00000117448.14	ENST00000496999.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	608.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGCAGTCTCACATG	13	True	NA	NA	False	NA	NA	NA	45550845	45567213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45551156_45566568_45566689_45566868
transcript_33938.known	chr15	+	448	5	FSM	ENSG00000185787.15	ENST00000559619.5	448	5	0	0	0	0	multi-exon	FALSE	canonical	3	7759	junction_3	310.581209186905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTGGAACCAGTAA	-12	True	NA	NA	False	NA	NA	NA	78872986	78887443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268
transcript_3394.known	chr1	+	948	4	FSM	ENSG00000117448.14	ENST00000473038.5	948	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	609.184336269044	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	2793	False	NA	27	True	AATAAA	-17	NA	45567548	45570049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45568178_45568926_45569000_45569142_45569230_45569890
transcript_33940.known	chr15	+	591	4	FSM	ENSG00000185787.15	ENST00000557961.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	7759	junction_3	357.122139081606	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCGATCAAGCCATATCTA	-27	True	NA	NA	False	NA	NA	NA	78872815	78886374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140
transcript_33943.known	chr15	-	1524	13	FSM	ENSG00000103811.18	ENST00000679172.1	1524	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	63.340514943702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGAGCATGCTGGTC	25	True	NA	-34	True	AATAAA	-19	NA	78945003	78921773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78937685_78937824_78939139_78939172_78944890
transcript_33945.known	chr15	-	1881	12	FSM	ENSG00000103811.18	ENST00000678886.1	1881	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	49.2190247434284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTGTGGCCTCCCCA	6	False	NA	NA	False	NA	NA	NA	78945094	78921482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944777
transcript_33946.known	chr15	-	1386	12	FSM	ENSG00000103811.18	ENST00000525807.6	1386	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	51.1634877558092	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCATGCTGGTCCTG	23	True	NA	-31	True	AATAAA	-22	NA	78945005	78921770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939167_78944890
transcript_33947.known	chr15	-	1503	12	FSM	ENSG00000103811.18	ENST00000676808.1	1503	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	50.7829606355231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-14	True	NA	-29	True	AATAAA	-24	NA	78945042	78921768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937497_78939139_78939172_78944890
transcript_33949.known	chr15	+	1483	4	FSM	ENSG00000166557.14	ENST00000543455.1	1483	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	227.288851953241	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGACTTGTGCCTT	-4	True	NA	14	True	AATAAA	-15	NA	79311158	79322837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_79311418_79313756_79314006_79314540_79314656_79321977
transcript_33950.known	chr15	+	1418	3	FSM	ENSG00000166557.14	ENST00000299705.10	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	22	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGTGCCTTTAT	3	True	NA	17	True	AATAAA	-18	NA	79311111	79322840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_79311418_79313756_79314006_79321977
transcript_33955.known	chr15	-	859	4	FSM	ENSG00000259332.3	ENST00000479961.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	344.907072831058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATAATCAGTGTTTTA	-32	True	NA	NA	False	NA	NA	NA	79923744	79845194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79907628_79907685_79923451
transcript_33965.nic	chr15	-	951	3	NIC	ENSG00000136371.11	novel	948	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	302.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	-7	True	NA	-1	True	ATTAAA	-34	NA	79897012	79844975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_33966.known	chr15	-	2301	3	FSM	ENSG00000136371.11	ENST00000258874.4	2301	3	0	0	0	0	multi-exon	TRUE	canonical	3	595	junction_2	124.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTGAATATGGGTTTG	-9	True	NA	NA	False	AGTAAA	-16	NA	79897014	79843546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79896871
transcript_33967.known	chr15	-	632	3	FSM	ENSG00000259332.3	ENST00000494999.1	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	408.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTACTATGATGCCT	-42	True	NA	NA	False	NA	NA	NA	79923754	79845375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79923451
transcript_33969.nic	chr15	-	952	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	-63	-64	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	302.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGTGTGAATAGTAGAA	3073	False	NA	-65	True	TATAAA	-19	NA	79897077	79845039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_33971.known	chr15	-	948	3	FSM	ENSG00000136371.11	ENST00000559722.2	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	2771	False	NA	-1	True	ATTAAA	-34	NA	79897379	79844975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79845443_79889092_79889355_79897160
transcript_33977.known	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	87	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	10	True	NA	-28	True	AATAAA	-23	NA	79923702	79898903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_79899126_79907628_79907685_79923451
transcript_33979.nnic	chr15	-	691	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	189	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTCTTCAGTT	-66	True	NA	-2	True	AATAAA	-22	NA	79923778	79898839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_33983.nnic	chr15	-	627	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-66	True	NA	-28	True	AATAAA	-23	NA	79923778	79898903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_33987.known	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.156085973588	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	-3	True	NA	25	True	AATAAA	-27	NA	80059675	80138393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33992.known	chr15	+	1602	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	869.317820030294	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	14	False	NA	-10	True	NA	NA	NA	80072582	80138358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33994.known	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	255.987812209878	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	35	True	NA	-8	True	NA	NA	NA	80059713	80138360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_33995.nic	chr15	+	1515	6	NIC	ENSG00000086666.19	novel	1559	7	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	729.43868830766	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCCCTTGTATTACTT	-25	True	NA	11	True	AATAAA	-13	NA	80059653	80138379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_80059810_80120327_80120499_80121747_80121821_80122699_80122801_80131179_80131294_80137479
transcript_34.known	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00092_+_0_1100
transcript_340.known	chr1	+	2821	2	FSM	ENSG00000197530.13	ENST00000477990.1	2821	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAGAAAAAATGAGC	3	True	NA	NA	False	NA	NA	NA	1615515	1619210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_1615634_1616507
transcript_34002.known	chr15	+	1446	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	800.491099263446	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	9	True	NA	-8	True	NA	NA	NA	80072577	80138360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_34008.known	chr15	+	2152	15	FSM	ENSG00000103876.14	ENST00000407106.5	2152	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	27.4818121673226	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTGCATGTCCAGTGT	-20	True	NA	NA	False	AATACA	-18	NA	80152779	80186946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80152906_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_34009.known	chr15	+	1471	15	FSM	ENSG00000103876.14	ENST00000261755.9	1471	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	31.1805963996318	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	-6	True	NA	13	True	AATAAA	-26	NA	80152793	80186343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80152842_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_34011.known	chr15	+	1456	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.3828469211889	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTGTGTCCACTTA	-9	True	NA	19	True	AATAAA	-32	NA	80152998	80186349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_34015.known	chr15	+	2124	5	FSM	ENSG00000103876.14	ENST00000558767.6	2124	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	11.5108644332213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAATGCTCACTTTCAT	-6	True	NA	NA	False	ATTAAA	-19	NA	80152793	80163744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245
transcript_34016.known	chr15	+	1507	12	FSM	ENSG00000103876.14	ENST00000682012.1	1507	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	33.0546754672911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATCGTGATTTGATCCA	-28	True	NA	37	True	NA	NA	NA	80152979	80186367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168317_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_34017.known	chr15	-	998	5	FSM	ENSG00000259495.3	ENST00000656160.1	998	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	8.04285397107271	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCATCTTGCAACTTG	746	False	NA	-23	True	AATAAA	-9	NA	80404214	80344868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_80345128_80347698_80347785_80397943_80398007_80403501_80403586_80403708
transcript_34021.known	chr15	-	4200	3	FSM	ENSG00000117899.11	ENST00000261758.6	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	31	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACCTGTATCAGAT	1	True	NA	-5	True	AATAAA	-27	NA	80989819	80975751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_80979478_80981949_80982183_80989578
transcript_34025.known	chr15	+	1612	7	FSM	ENSG00000156206.14	ENST00000286732.5	1612	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.763762615825973	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCATCTGTTCATTCC	-7	True	NA	NA	False	AATAAA	-19	NA	81134269	81149179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_81134399_81135269_81135360_81136515_81136749_81138050_81138136_81143661_81143821_81147857_81147932_81148337
transcript_34026.known	chr15	-	4887	6	FSM	ENSG00000172345.14	ENST00000302824.7	4887	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	4.01995024844836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCATTAAGCTCTCTT	-2	True	NA	0	True	AATAAA	-25	NA	81324141	81309052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81322898_81322949_81324000
transcript_34030.known	chr15	-	1264	5	FSM	ENSG00000172345.14	ENST00000325346.6	1264	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.39509972887452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCAATGTGTCTTCCA	-12	True	NA	-7	True	TTTAAA	-25	NA	81324183	81312667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81324000
transcript_34032.nic	chr15	+	955	4	FSM	ENSG00000259343.8	ENST00000687585.1	836	4	-119	0	1	0	multi-exon	FALSE	canonical	3	22	junction_3	6.94422221866655	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	81324368	81343150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_81324562_81332344_81332542_81341561_81341709_81342732
transcript_34038.nnic	chr15	-	717	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-326	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.3541565040626	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81798396	81660374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_81660711_81661999_81662139_81797923_81798045_81798275
transcript_34040.nnic	chr15	-	937	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-322	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAGAAAAAGA	NA	False	NA	NA	False	AAAAAG	-18	NA	81798392	81660381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_81660628_81706499_81706583_81707869_81708009_81797923
transcript_34046.nnic	chr15	-	712	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100411	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	23	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697659	81660374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_81660711_81661999_81662139_81697422
transcript_34047.nnic	chr15	-	593	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100445	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697625	81660374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_81660711_81661999_81662139_81697507
transcript_34048.nnic	chr15	-	678	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	67327	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	22	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81730743	81660374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_81660711_81661999_81662139_81730540
transcript_34055.known	chr15	-	3546	20	FSM	ENSG00000140598.15	ENST00000650113.1	3546	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	68.5843799601282	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAGAGGATGTTAGA	63	False	NA	-24	True	AATAAA	-17	NA	82262638	82130240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227580_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_34060.nic	chr15	-	2316	18	ISM	ENSG00000140598.15	ENST00000268206.12	3643	20	-15	22060	-15	-136	5prime_fragment	FALSE	canonical	3	205	junction_9	27.3398450622472	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAGAAGATCAAAGCAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	82262749	82152292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_34061.nnic	chr15	-	1147	5	NNC	ENSG00000140598.15	novel	521	3	NA	NA	-15	9887	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	127.930645273132	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTACATGTGGTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	82262749	82251800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_82252549_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_34064.known	chr15	+	445	4	FSM	ENSG00000188659.10	ENST00000562097.5	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	4.02768199119819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTCCTTATGTAGC	21	True	NA	0	True	AATAAA	-11	NA	82262826	82264881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82262933_82263138_82263189_82263358_82263439_82264672
transcript_34065.known	chr15	+	811	4	FSM	ENSG00000188659.10	ENST00000565432.1	811	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCACTTTGTGTCACAT	0	True	NA	NA	False	ATTAAA	-17	NA	82262843	82272094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82262933_82263138_82263189_82265568_82265749_82271602
transcript_34067.known	chr15	+	551	2	FSM	ENSG00000188659.10	ENST00000569120.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATTTAGTAACTATT	12	True	NA	NA	False	AAGAAA	-44	NA	82262817	82265748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82263189_82265568
transcript_34068.known	chr15	+	262	2	FSM	ENSG00000188659.10	ENST00000565006.1	262	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	279	False	NA	8	True	AATAAA	-19	NA	82263143	82264889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82263189_82264672
transcript_34069.known	chr15	+	404	3	FSM	ENSG00000188659.10	ENST00000566861.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	20	True	NA	8	True	AATAAA	-19	NA	82262825	82264889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82262933_82263358_82263439_82264672
transcript_34070.known	chr15	-	636	2	FSM	ENSG00000237550.6	ENST00000418824.3	636	2	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTTCAAGCACAATAT	-7	True	NA	2	True	AATAAA	-33	NA	82372912	82372195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82372417_82372497
transcript_34071.known	chr15	-	579	1	FSM	ENSG00000237550.6	ENST00000466501.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGAGTTACCTGGCT	32	False	NA	NA	False	AAAAAG	-27	NA	82372888	82372309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82372300_82372900
transcript_34076.known	chr15	-	488	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_4	1585.89036506311	19805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCATCTTTGCAGT	-2	True	NA	-16	True	AATAAA	-18	NA	82540457	82536749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_34081.known	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_3	1802.5173138327	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-4	True	NA	-21	True	AATAAA	-13	NA	82540459	82536754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
transcript_34085.known	chr15	-	932	4	FSM	ENSG00000182774.13	ENST00000560639.1	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_3	1521.97072537184	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGAATTTTTTCTGTA	3	True	NA	-75	True	NA	NA	NA	82540452	82536808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82536882_82538305_82538986_82539980_82540133_82540425
transcript_34088.known	chr15	-	2650	18	FSM	ENSG00000103723.17	ENST00000660624.1	2650	18	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	6.75164980478884	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGCTCACCTTTCC	60	False	NA	-2	True	AATAAA	-14	NA	82680407	82659281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
transcript_34091.known	chr15	+	674	5	FSM	ENSG00000250988.7	ENST00000559366.1	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	28.1813324738203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	14	True	NA	NA	False	AATAAA	-19	NA	82750583	82757206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903_82756940_82757045
transcript_34092.nnic	chr15	+	786	5	NNC	ENSG00000250988.7	novel	674	5	NA	NA	3	-123	intron_retention	FALSE	canonical	2	7	junction_2	28.1547065337219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTCTTTATGCTGAA	-1	True	NA	NA	False	AATAAA	-18	NA	82750568	82757081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_82750849_82752438_82752555_82754628_82754785_82756729_82756786_82756903
transcript_34094.known	chr15	+	790	4	FSM	ENSG00000250988.7	ENST00000561107.5	790	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	8.16496580927726	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	2	True	NA	NA	False	AATAAA	-17	NA	82750571	82757204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903
transcript_34099.known	chr15	+	725	3	FSM	ENSG00000250988.7	ENST00000558174.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	30	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	13	True	NA	NA	False	AATAAA	-19	NA	82750582	82757206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82750849_82754628_82754785_82756903
transcript_341.known	chr1	-	2992	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_16	41.8596785341289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGTGTCGTCCTTTGA	-17	True	NA	NA	False	ATTAAA	-18	NA	1659004	1635224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_34102.known	chr15	+	594	2	FSM	ENSG00000250988.7	ENST00000544685.2	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAAAAAACAGTGTTGA	-6	True	NA	NA	False	TATAAA	-9	NA	82750563	82754937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82750849_82754628
transcript_34108.known	chr15	+	1565	4	FSM	ENSG00000169612.4	ENST00000304191.4	1565	4	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	30.169889330626	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCAGTTAGCCCATT	-3	True	NA	37	True	AATAAA	-34	NA	82986209	82991057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_82986370_82987335_82987385_82989009_82989189_82989880
transcript_34118.known	chr15	-	631	4	FSM	ENSG00000169609.14	ENST00000508990.2	631	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.8880646179498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATCATGACTTGTA	23	True	NA	NA	False	AAAAAG	-3	NA	83011585	83004685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011496
transcript_3412.known	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_5	629.410450585405	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	-2	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_34120.known	chr15	-	419	4	FSM	ENSG00000169609.14	ENST00000563387.5	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	60.8623218602628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCACAACGGTTCTG	6094	False	NA	-21	True	ATTAAA	-5	NA	83011543	83004866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011485
transcript_34123.known	chr15	-	11274	4	FSM	ENSG00000169609.14	ENST00000304177.10	11274	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.0039122552804	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTTATATAATTTTTCA	-31	True	NA	-7	True	AATAAA	-20	NA	83011639	82994816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83005693_83008547_83008676_83010236_83010364_83011496
transcript_34132.known	chr15	-	561	4	FSM	ENSG00000169609.14	ENST00000538348.6	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.3755076016458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTCTCTCCAAATAATGAA	1	True	NA	NA	False	ATTAAA	-18	NA	83011607	82988962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_82989158_83008547_83008676_83010236_83010364_83011496
transcript_34133.known	chr15	-	3194	8	FSM	ENSG00000064726.10	ENST00000261721.9	3194	8	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	54.3582222532214	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTATGTCATTTGCCT	-21	True	NA	NA	False	AATAAA	-26	NA	83067252	83016422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83018226_83018706_83018854_83020674_83020763_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
transcript_34135.known	chr15	+	1885	10	FSM	ENSG00000136404.16	ENST00000322019.14	1885	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.52659116242039	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTTAAAGAAAATTTGT	-9	True	NA	NA	False	ATTAAA	-30	NA	83107644	83137408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119682_83121920_83122004_83122756_83122879_83124671_83124777_83126754_83126848_83127357_83127478_83136480
transcript_34136.known	chr15	+	1808	10	FSM	ENSG00000136404.16	ENST00000379384.9	1808	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.004407783322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTATTGGTGGCTG	-6	True	NA	NA	False	AATGAA	-2	NA	83107647	83137281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119735_83121920_83122004_83122756_83122879_83124671_83124777_83126754_83126848_83127357_83127478_83136480
transcript_34140.known	chr15	-	12538	6	FSM	ENSG00000166503.9	ENST00000299633.7	12538	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_5	34.6156034181119	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGTGTAACCTTGG	18	True	NA	NA	False	AATAAA	-15	NA	83207823	83127752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83207330
transcript_34152.known	chr15	+	758	2	FSM	ENSG00000140600.17	ENST00000564054.1	758	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCGACATTCCTGAT	NA	False	NA	-7	True	AAGAAA	-13	NA	83609269	83618642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_83609467_83618081
transcript_34161.nic	chr15	-	1994	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_2	36.4843716541754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	4290	False	NA	NA	False	NA	NA	NA	84654316	84642767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_34163.nic	chr15	-	1680	9	NIC	ENSG00000177082.13	novel	5331	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	36.4843716541754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	4290	False	NA	-35	True	AATAAA	-15	NA	84654316	84643081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_34164.nic	chr15	-	1617	9	NIC	ENSG00000177082.13	novel	5331	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	36.4843716541754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTGTGAATTTTTTT	4290	False	NA	-11	True	TATAAA	-1	NA	84654316	84643144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_34167.known	chr15	-	1915	8	FSM	ENSG00000177082.13	ENST00000398528.7	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	28.6975786506138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	4263	False	NA	NA	False	NA	NA	NA	84654343	84642767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_34171.nic	chr15	-	2228	7	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	61	junction_6	24.3241991988774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	4290	False	NA	NA	False	NA	NA	NA	84654316	84642767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_34174.nic	chr15	-	1914	7	NIC	ENSG00000177082.13	novel	5331	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	61	junction_6	24.3241991988774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	4290	False	NA	-35	True	AATAAA	-15	NA	84654316	84643081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_84643724_84645470_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_34178.nic	chr15	+	1122	5	NIC	ENSG00000176371.14	novel	910	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	50.5717312339611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	-16	True	NA	28	True	AATAAA	-18	NA	84601004	84623717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_84601136_84603819_84604334_84620601_84620773_84622645_84622715_84623480
transcript_34182.known	chr15	-	1180	5	FSM	ENSG00000177082.13	ENST00000560252.5	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	29.608909132219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAAAATACA	4308	False	NA	NA	False	NA	NA	NA	84654298	84647085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_34185.nnic	chr15	+	1120	4	NNC	ENSG00000176371.14	novel	906	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	53.2749680640188	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTGCTTCCGAGC	-16	True	NA	9	True	AATAAA	-17	NA	84601004	84616610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_84601136_84603819_84604334_84614654_84614828_84616308
transcript_34186.nnic	chr15	+	1173	4	NNC	ENSG00000176371.14	novel	3813	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	30.6521704868604	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTGCTTCCGAGC	-16	True	NA	9	True	AATAAA	-17	NA	84601004	84616610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_84601189_84603819_84604334_84614654_84614828_84616308
transcript_34187.known	chr15	+	8975	4	FSM	ENSG00000176700.21	ENST00000348993.9	8975	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCTGAGTCTACTA	-15	True	NA	4	True	ATTAAA	-15	NA	84631450	84647478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84632299_84637346_84637421_84638395_84638478_84639507
transcript_34189.known	chr15	+	993	3	FSM	ENSG00000176371.14	ENST00000334141.7	993	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	41.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	-3	True	NA	12	True	AATAAA	-25	NA	84601017	84606889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84601136_84603819_84604334_84606528
transcript_34190.known	chr15	+	906	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	30.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	29	False	NA	13	True	AATAAA	-21	NA	84601049	84616614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84601136_84603819_84604334_84616308
transcript_34191.known	chr15	+	3756	3	FSM	ENSG00000176371.14	ENST00000546148.6	3756	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	24.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	-12	True	NA	27	True	AATAAA	-17	NA	84601008	84623716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84601136_84603819_84604334_84620601
transcript_34193.nic	chr15	+	1059	3	NIC	ENSG00000176371.14	novel	993	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	17.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	-16	True	NA	12	True	AATAAA	-25	NA	84601004	84606889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_84601189_84603819_84604334_84606528
transcript_34194.nic	chr15	+	1004	3	NIC	ENSG00000176371.14	novel	906	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	-16	True	NA	13	True	AATAAA	-21	NA	84601004	84616614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_84601189_84603819_84604334_84616308
transcript_34195.known	chr15	-	1223	1	FSM	ENSG00000276278.1	ENST00000621980.1	1223	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGATGTGTGATAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	84623237	84622014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84622000_84623200
transcript_34196.known	chr15	+	2390	3	FSM	ENSG00000176371.14	ENST00000327179.6	2390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGGCCGAGTCCTCAGA	29	False	NA	-34	True	NA	NA	NA	84601049	84622394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_84601136_84603819_84604331_84620601
transcript_34197.known	chr15	-	655	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTGGTCCTCTCCTT	1	True	NA	-4	True	AATAAA	-18	NA	84658199	84655131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84655410_84657175_84657349_84657995
transcript_34199.known	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	557.049194915095	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-1	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_34200.known	chr15	-	1223	7	FSM	ENSG00000140612.14	ENST00000455959.7	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	551.047386548763	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCACATTGAACCCC	7	True	NA	-28	True	AATAAA	-2	NA	84716163	84669559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84714730_84714867_84716024
transcript_34205.known	chr15	-	1079	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_3	28.4042250378355	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-2	True	NA	-12	True	AATAAA	-18	NA	84716139	84669543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_34216.known	chr15	-	1256	5	FSM	ENSG00000140612.14	ENST00000559729.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	523.305121320249	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-28	True	NA	-6	True	AATAAA	-24	NA	84716460	84669537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84691534_84691645_84716024
transcript_34217.known	chr15	-	882	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	512.05590515099	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	0	True	NA	-13	True	AATAAA	-17	NA	84716063	84669544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
transcript_34218.known	chr15	-	971	5	FSM	ENSG00000140612.14	ENST00000558134.5	971	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	518.180168956706	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	3	True	NA	-12	True	AATAAA	-18	NA	84716089	84669543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_84670070_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_34229.known	chr15	-	548	2	FSM	ENSG00000183655.13	ENST00000559131.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTGCCCTGCTGGGG	-1	True	NA	NA	False	GGGGCT	-27	NA	85794918	85760616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_85761012_85794765
transcript_34230.known	chr15	-	3650	3	FSM	ENSG00000183655.13	ENST00000337975.6	3650	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCCTGCCTTGTGTG	-8	True	NA	-5	True	AATAAA	-15	NA	85794925	85759325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_85761012_85768016_85769821_85794765
transcript_34231.known	chr15	+	1966	3	FSM	ENSG00000259527.2	ENST00000560153.2	1966	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTGACGATCACGTC	0	True	NA	NA	False	AATAAA	-14	NA	87576928	87579866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_87577048_87577709_87577765_87578074
transcript_3424.known	chr1	+	1538	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	746.159540025856	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	22	False	NA	14	True	AATAAA	-14	NA	45584064	45618247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_34240.nic	chr15	+	938	6	NIC	ENSG00000181991.16	novel	2002	6	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	90.9162251746079	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	274	False	NA	16	True	AATAAA	-18	NA	88467645	88478263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_88467783_88467910_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_34242.nnic	chr15	+	918	6	NNC	ENSG00000181991.16	novel	2002	6	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	132.06967857915	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	274	False	NA	16	True	AATAAA	-18	NA	88467645	88478263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_88467783_88467910_88468025_88472646_88472726_88475109_88475240_88476988_88477055_88477871
transcript_34245.known	chr15	-	2315	6	FSM	ENSG00000140543.15	ENST00000564406.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	18.9631221058137	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTGGTTGGATGA	5	True	NA	NA	False	AATAAA	-21	NA	88546653	88512482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88536311_88536382_88546539
transcript_34252.known	chr15	-	2276	5	FSM	ENSG00000140543.15	ENST00000268148.13	2276	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	10.2072278312968	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-23	True	NA	NA	False	AATAAA	-24	NA	88546681	88512479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88546539
transcript_34254.known	chr15	-	986	4	FSM	ENSG00000259494.2	ENST00000312475.5	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	46.4279609239471	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTCTCAGCTGATTTG	1	True	NA	-15	True	AATAAA	-15	NA	88467388	88459477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88459864_88464702_88464877_88465586_88465774_88467149
transcript_34264.known	chr15	+	453	2	FSM	ENSG00000181991.16	ENST00000559125.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAGTGAATGTGAGAT	-2	True	NA	85	True	AGTAAA	-23	NA	88467677	88468258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467910
transcript_34267.known	chr15	-	1002	2	FSM	ENSG00000259494.2	ENST00000558531.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCGAGGTGTAATTTGG	-1	True	NA	NA	False	NA	NA	NA	88467390	88465012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88465774_88467149
transcript_34268.known	chr15	+	766	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	124.383228371031	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAATTTTGAGATTTT	12	True	NA	12	True	AATAAA	-14	NA	88467717	88478259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
transcript_34269.known	chr15	+	458	3	FSM	ENSG00000181991.16	ENST00000560850.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	115	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCATTTACCCTCCCA	2	True	NA	19	True	AATAAA	-14	NA	88467707	88472620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467907_88468025_88472354
transcript_34270.known	chr15	+	3392	6	FSM	ENSG00000181991.16	ENST00000325844.9	3392	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	40.4949379552556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTGTCTCTTAATCAT	2	True	NA	11	True	AATAAA	-18	NA	88467707	88480776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467907_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_34271.known	chr15	+	2002	6	FSM	ENSG00000181991.16	ENST00000559323.5	2002	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.150572200052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	0	True	NA	16	True	AATAAA	-18	NA	88467705	88478263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88467783_88467907_88469146_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_34273.known	chr15	+	3072	4	FSM	ENSG00000181026.15	ENST00000332810.4	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	71.3411210702184	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	-9	True	NA	28	True	AATAAA	-18	NA	88621339	88632281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88621383_88626145_88626750_88629225_88629427_88630057
transcript_34275.nic	chr15	+	3759	3	ISM	ENSG00000181026.15	ENST00000332810.4	3072	4	-56	0	-53	0	intron_retention	TRUE	canonical	3	515	junction_1	87	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	6662	False	NA	28	True	AATAAA	-18	NA	88621283	88632281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_88621383_88626145_88626750_88629225
transcript_34276.known	chr15	+	1242	2	FSM	ENSG00000181026.15	ENST00000557787.1	1242	2	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGGGCTTAAGGGGAAA	-12	True	NA	NA	False	CATAAA	-2	NA	88621336	88627341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88621383_88626145
transcript_34277.known	chr15	+	1583	4	FSM	ENSG00000172183.16	ENST00000306072.10	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.2836838484589	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAATTTTTTTTTTT	-6	True	NA	NA	False	AATAAA	-17	NA	88639015	88656483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_88639077_88639342_88639595_88652109_88652311_88655414
transcript_34278.known	chr15	-	1892	5	FSM	ENSG00000140511.12	ENST00000359595.8	1892	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	40.1901729282172	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCTTTTCTGTGT	-9	True	NA	-5	True	AATAAA	-25	NA	88895544	88877293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88895458
transcript_34281.nnic	chr15	-	2538	8	NNC	ENSG00000140545.15	novel	1936	8	NA	NA	155	0	intron_retention	FALSE	canonical	3	26	junction_7	844.4680247931	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-7	True	NA	-5	True	AATATA	-20	NA	88913162	88898682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88912427
transcript_34282.known	chr15	-	1936	8	FSM	ENSG00000140545.15	ENST00000268150.13	1936	8	0	0	0	0	multi-exon	FALSE	canonical	3	2267	junction_2	144.108519200367	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	0	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_34285.known	chr15	-	1752	7	FSM	ENSG00000140545.15	ENST00000268151.11	1752	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	810.70723582698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATATATTTATCTTC	-2	True	NA	-35	True	NA	NA	NA	88913381	88898712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_88899533_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_34287.nnic	chr15	-	1815	4	NNC	ENSG00000140545.15	novel	1936	8	NA	NA	451	0	intron_retention	TRUE	non_canonical	0	0	junction_3	1213.58092711886	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-8	True	NA	-5	True	AATATA	-20	NA	88901509	88898682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_-_88899533_88899655_88899812_88900656_88901075_88901118
transcript_34289.known	chr15	+	8424	11	FSM	ENSG00000140526.18	ENST00000352732.10	8424	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	10.0995049383621	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTATGTGTCCTTTG	0	True	NA	12	True	AATAAA	-14	NA	89088455	89202355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89088564_89113724_89113825_89116321_89116522_89151676_89151853_89155366_89155535_89175811_89175996_89185423_89185517_89188192_89188304_89191079_89191150_89193234_89193320_89195226
transcript_34294.known	chr15	+	4733	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	84.2970503362846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGGTTGAAGTAGG	-15	True	NA	16	True	AATAAA	-16	NA	89243978	89317131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_34297.nic	chr15	+	4117	38	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	87.4480666083747	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	-15	True	NA	26	True	AATAAA	-22	NA	89243978	89316481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_34301.known	chr15	+	4713	37	FSM	ENSG00000140525.19	ENST00000300027.12	4713	37	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_23	113.032481265288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGAGTCAAGAGTGGA	NA	False	NA	NA	False	TATAAA	-20	NA	89243948	89317261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_34305.nic	chr15	+	3937	37	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_23	115.41528278352	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	-15	True	NA	26	True	AATAAA	-22	NA	89243978	89316481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_34313.nic	chr15	+	1520	14	ISM	ENSG00000140525.19	ENST00000674831.1	4239	39	9	37657	5	10183	5prime_fragment	FALSE	canonical	3	241	junction_1	102.065937615356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCATTTCAATGTCATAA	NA	False	NA	NA	False	AATAAA	-14	NA	89243953	89278814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686
transcript_34318.nic	chr15	+	1087	10	ISM	ENSG00000140525.19	ENST00000674831.1	4239	39	9	47840	5	0	5prime_fragment	FALSE	canonical	3	241	junction_1	116.078623844273	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	NA	False	NA	8	True	AATAAA	-14	NA	89243953	89268631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_34319.nic	chr15	+	1095	10	NIC	ENSG00000140525.19	novel	4503	39	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_1	152.575987949498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	-37	True	NA	8	True	AATAAA	-14	NA	89243956	89268631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_89244045_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_34320.nic	chr15	+	1096	10	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	125.545427320105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	-15	True	NA	8	True	AATAAA	-14	NA	89243978	89268631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_34324.nnic	chr15	+	653	8	NNC	ENSG00000140525.19	novel	3690	36	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	240.439393695826	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	NA	False	NA	26	True	AATAAA	-22	NA	89243953	89316481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260752_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_34334.known	chr15	+	584	6	FSM	ENSG00000140525.19	ENST00000567891.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	166.942385271087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGATTAACACCCTG	-19	True	NA	NA	False	NA	NA	NA	89243974	89261847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820
transcript_34335.known	chr15	+	1109	1	FSM	ENSG00000261441.1	ENST00000569473.1	1109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATACA	-17	NA	89335052	89336161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89335100_89336200
transcript_34336.known	chr15	+	6788	22	FSM	ENSG00000140534.14	ENST00000268138.12	6788	22	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	14.2766637997713	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCAGTTTCCCCTATA	-2	True	NA	14	True	ATTAAA	-21	NA	89575468	89628023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_89576241_89582685_89582966_89584285_89584528_89585707_89585943_89592046_89592177_89594414_89594555_89595392_89595612_89599323_89599476_89600584_89600686_89601297_89601392_89601488_89601569_89601736_89601977_89602795_89602893_89606767_89606826_89608802_89608950_89616404_89616496_89618151_89618211_89619707_89619843_89621392_89621551_89623622_89625787_89625935_89626062_89626955
transcript_34337.nic	chr15	-	2288	2	ISM	ENSG00000166813.16	ENST00000445906.1	1375	5	-22	2239	-6	-2239	5prime_fragment	FALSE	canonical	3	35	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	-18	True	NA	NA	False	NA	NA	NA	89655473	89650741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_-_89652955_89655398
transcript_34338.known	chr15	-	2708	3	FSM	ENSG00000166821.9	ENST00000300056.8	2708	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTGTCTGTGAGTG	26	False	89690780	-3	True	AATAAA	-14	NA	89690754	89681534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89683949_89686430_89686547_89690576
transcript_34343.known	chr15	-	1262	7	FSM	ENSG00000157823.17	ENST00000423566.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	222.443750692669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACCAGAGTCACCCGC	19	True	NA	NA	False	NA	NA	NA	89893977	89834981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89877305_89877425_89888520_89888633_89889048_89889141_89893880
transcript_34344.known	chr15	-	738	7	FSM	ENSG00000157823.17	ENST00000558011.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	214.935390809011	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTTGAGCCTTAGAAG	2	True	NA	NA	False	NA	NA	NA	89893994	89835439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89878264_89878301_89888520_89888633_89889048_89889141_89893880
transcript_34345.known	chr15	-	578	6	FSM	ENSG00000157823.17	ENST00000558806.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	185.321774219869	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCCAGAGATTCCTC	-32	True	NA	NA	False	AAAACA	-2	NA	89894028	89835593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889137_89893880
transcript_3435.known	chr1	+	1458	13	FSM	ENSG00000132780.17	ENST00000372052.8	1458	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	922.429295694557	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGAGGCTTTGATGGTT	20	False	NA	13	True	AATAAA	-13	NA	45584062	45618246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_34350.known	chr15	-	2439	10	FSM	ENSG00000250021.7	ENST00000398333.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	230.409994210535	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAAGGTTTGTTGCTGTG	63	False	NA	-11	True	AATACA	-15	NA	89912882	89834307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889141_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
transcript_34354.known	chr15	-	2658	11	FSM	ENSG00000182054.10	ENST00000330062.8	2658	11	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	49.4716080191457	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCCTCTGCATAGTA	16	True	NA	-16	True	AATAAA	-30	NA	90102468	90083044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90090478_90090645_90091552_90091645_90102275
transcript_34359.known	chr15	-	1141	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_2	37.446257786623	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCTGAAGAATTAAAAAC	-11	True	NA	-2	True	AGTAAA	-16	NA	90233941	90229974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
transcript_34360.nic	chr15	-	925	7	NIC	ENSG00000185043.12	novel	906	8	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	199.264202059031	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	11	True	NA	-18	True	AATAAA	-16	NA	90234084	90230249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233918
transcript_34361.known	chr15	-	1096	7	FSM	ENSG00000185043.12	ENST00000612800.1	1096	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	194.820786593446	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTGACATGAGATACAC	10	True	NA	-14	True	AATAAA	-20	NA	90234047	90230245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232448_90233668_90233704_90233834
transcript_34366.known	chr15	+	5258	5	FSM	ENSG00000183208.13	ENST00000559204.6	5258	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.69041575982343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAGCTATTTATATGC	-47	True	NA	NA	False	AGTAAA	-23	NA	90234197	90245811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90234293_90234521_90234597_90236062_90236182_90238491_90238549_90240899
transcript_34369.known	chr15	+	5128	4	FSM	ENSG00000183208.13	ENST00000329600.8	5128	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAGCTATTTATATGC	-36	True	NA	NA	False	AGTAAA	-23	NA	90234208	90245811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90234293_90234521_90234597_90238491_90238549_90240899
transcript_3437.known	chr1	+	3097	13	FSM	ENSG00000132780.17	ENST00000537798.5	3097	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	822.320750477979	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTTTAAAGATCTTA	NA	False	NA	29	True	AATAAA	-25	NA	45583987	45618904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_34373.known	chr15	+	1340	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	783.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	0	True	NA	15	True	AATAAA	-17	NA	90265671	90272211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90265877_90266287_90266399_90271187
transcript_34376.known	chr15	+	2784	2	FSM	ENSG00000182768.9	ENST00000331497.3	2784	2	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATCAATTATTATTG	-13	True	NA	NA	False	ATTAAA	-16	NA	90265658	90273231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90266399_90271187
transcript_34377.known	chr15	+	3163	4	FSM	ENSG00000196391.11	ENST00000354377.8	3163	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGAAAATTTTGGCTAA	8	True	NA	31	True	TATAAA	-43	NA	90352283	90362847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90352412_90354641_90354765_90358850_90358958_90360042
transcript_34378.known	chr15	+	7205	38	FSM	ENSG00000140575.13	ENST00000268182.10	7205	38	0	0	0	0	multi-exon	TRUE	canonical	3	378	junction_16	63.0474446553932	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTTTCTCAGTT	-32	True	NA	19	True	AATAAA	-15	NA	90388241	90502239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544_90492712_90494712_90494836_90497231_90497341_90499994
transcript_34380.nic	chr15	+	2936	24	ISM	ENSG00000140575.13	ENST00000633485.1	5863	39	-19	24154	-14	-403	5prime_fragment	FALSE	canonical	3	378	junction_16	38.0497137746985	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACAGTTGTCTGATA	2	False	NA	NA	False	AGTAAA	-18	NA	90388227	90476700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662
transcript_34383.known	chr15	+	1201	2	FSM	ENSG00000140575.13	ENST00000559809.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTGTATGTGTG	34	False	NA	5	True	AATAAA	-28	NA	90388354	90391932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90388397_90390773
transcript_34386.known	chr15	+	5240	22	FSM	ENSG00000197299.13	ENST00000355112.8	5240	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	28.503808871472	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCATTCTTTTGCC	-22	True	NA	NA	False	AATAAA	-16	NA	90717345	90816166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
transcript_34396.known	chr15	+	4002	23	FSM	ENSG00000140553.18	ENST00000672480.1	4002	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	115.470050855744	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	-3	True	NA	26	True	AATAAA	-17	NA	90930179	90954093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90930256_90933976_90934144_90934338_90934550_90934943_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_34397.known	chr15	+	3252	20	FSM	ENSG00000140553.18	ENST00000418476.2	3252	20	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	34.7078028539314	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	-8	True	NA	26	True	AATAAA	-17	NA	90935284	90954093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90935376_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_34401.nic	chr15	+	1813	10	ISM	ENSG00000140553.18	ENST00000394275.7	4001	23	5083	6882	-22	72	internal_fragment	FALSE	canonical	3	135	junction_1	59.4451713351196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGCTTTCTTGTGGTG	379	False	NA	NA	False	AATAAA	-18	NA	90935262	90947210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613
transcript_34404.nic	chr15	+	1207	6	ISM	ENSG00000140553.18	ENST00000553671.6	855	7	-22	2108	-22	0	5prime_fragment	FALSE	canonical	3	135	junction_1	79.0883050772995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAATAAAAATGGC	379	False	NA	NA	False	AAAAAG	-35	NA	90935262	90940976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305
transcript_34407.known	chr15	+	1507	5	FSM	ENSG00000140553.18	ENST00000486253.1	1507	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	48.5206141758325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAATAAAAATGGC	17	True	NA	NA	False	AAAAAG	-35	NA	90935309	90940976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_90935376_90935543_90935706_90935945_90936461_90939730_90939824_90940305
transcript_34412.known	chr15	-	1856	4	FSM	ENSG00000184508.12	ENST00000394272.8	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	8.73053390247253	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTGGAAAAGCGATCA	-5	True	NA	-15	True	ATTAAA	-16	NA	90932549	90929967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428
transcript_34414.known	chr15	-	1047	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	72.0293150198044	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-2	True	NA	-8	True	AATAAA	-17	NA	90932546	90930924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
transcript_34416.known	chr15	-	1220	3	FSM	ENSG00000184508.12	ENST00000494993.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-8	True	NA	-8	True	AATAAA	-17	NA	90932552	90930924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90931406_90931703_90931945_90932054
transcript_34417.known	chr15	-	2501	23	FSM	ENSG00000184056.15	ENST00000333371.8	2501	23	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_17	11.2811552072435	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTCGTTCTGGACA	-19	True	NA	-3	True	AATAAA	-21	NA	91022594	90998672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91017804_91017886_91022153
transcript_34418.known	chr15	-	2356	22	FSM	ENSG00000184056.15	ENST00000574755.5	2356	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	26.4832981209871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGTTGGTCGTTCTGGA	62	False	NA	-5	True	AATAAA	-19	NA	91022513	90998674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91017804_91017886_91022153
transcript_34423.nic	chr15	-	2590	15	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	99.3979068066879	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	48	False	NA	-3	True	AATAAA	-30	NA	90994602	90966039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90966654_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_34425.nic	chr15	-	2500	15	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	101.539175108096	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-3	True	NA	-3	True	AATAAA	-30	NA	90994589	90966039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90966654_90969078_90969121_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_34427.known	chr15	-	3072	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	97.9025963258735	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-2	True	NA	-3	True	AATAAA	-30	NA	90994535	90966039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_34431.nnic	chr15	-	2638	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	-90	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	76.5434478468538	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	NA	False	NA	-3	True	AATAAA	-30	NA	90994692	90966039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90966654_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_34434.nic	chr15	-	3007	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	64.674881033415	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-3	True	NA	-3	True	AATAAA	-30	NA	90994589	90966039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_34435.nic	chr15	-	2483	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	65.1276398118005	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	26	False	NA	-13	True	AATAAA	-20	NA	90994624	90966049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_34436.known	chr15	-	4087	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	69.0223358068726	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-40	True	AATATA	-13	NA	90995629	90966076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_34440.nic	chr15	-	2894	13	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	95.7370168163229	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-3	True	NA	-3	True	AATAAA	-30	NA	90994609	90966039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90994406
transcript_34456.known	chr15	-	409	2	FSM	ENSG00000185442.13	ENST00000554082.1	409	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGCCTCGAGGTATTTT	-3	True	NA	NA	False	ATTAAA	-16	NA	92809884	92808843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_92809014_92809645
transcript_34458.known	chr15	+	2232	13	FSM	ENSG00000173575.22	ENST00000420239.7	2232	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7.1278015934477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGGAGTTTTTAT	-6	True	NA	6	True	AATAAA	-17	NA	92900323	92949234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951
transcript_34459.known	chr15	+	7764	38	FSM	ENSG00000173575.22	ENST00000626874.2	7764	38	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_16	7.82757949371708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGTTCCGCAGGCTGT	3053	False	NA	NA	False	NA	NA	NA	92900188	93022162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176_93002318_93004616_93004752_93009144_93009324_93012344_93012445_93014695_93014910_93020011
transcript_34461.known	chr15	+	1740	2	FSM	ENSG00000173575.22	ENST00000627622.1	1740	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGTGATTCATTATG	-9	True	NA	115	True	TATAAA	-21	NA	92900320	92902402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_92900825_92901166
transcript_34462.known	chr15	+	802	5	FSM	ENSG00000272888.8	ENST00000556895.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_1	133.139729232112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCACACTAACCCAGATA	12	False	NA	-78	True	AAGAAA	-2	NA	92882861	92897975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_92883187_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_34463.nic	chr15	+	689	5	NIC	ENSG00000272888.8	novel	1776	4	NA	NA	414	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	397.062652486985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	120	False	NA	19	True	AATAAA	-2	NA	92883428	92898072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_92883544_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_34464.known	chr15	-	1358	3	FSM	ENSG00000258433.2	ENST00000554649.2	1358	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAAGGTGACCAAAACA	NA	False	NA	NA	False	AAGAAA	-2	NA	95047088	95034107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_95034745_95035383_95035739_95046722
transcript_34465.known	chr15	-	1135	4	FSM	ENSG00000258489.4	ENST00000668885.1	1135	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTCTGTGATTT	NA	False	NA	NA	False	AATAAA	-29	NA	95493843	95463586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_95464387_95464719_95464810_95491498_95491550_95493649
transcript_34468.known	chr15	+	1149	5	FSM	ENSG00000259485.2	ENST00000656523.1	1149	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.79021822544144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACACACTTGTGCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	97295836	97432089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_97296324_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_34471.known	chr15	+	956	4	FSM	ENSG00000259485.2	ENST00000655490.1	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5.90668171555645	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACACACTTGTGCTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	97295874	97432090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_97296324_97411191_97411279_97429769_97429890_97431790
transcript_34472.known	chr15	+	798	3	FSM	ENSG00000259485.2	ENST00000659377.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295908	97432086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_97296324_97411191_97411279_97431790
transcript_34474.known	chr15	-	334	2	FSM	ENSG00000259424.2	ENST00000560221.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGAGATAAGAAGTGGTT	3465	False	NA	-11	True	AATAAA	-35	NA	98647371	98646950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_98647194_98647280
transcript_34475.nic	chr15	-	3216	11	NIC	ENSG00000103852.13	novel	3872	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	17.9022344974028	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCCTTTCTGTACTTC	-2	True	NA	-4	True	AATAAA	-18	NA	99249581	99136322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99249416
transcript_34481.known	chr15	+	967	10	FSM	ENSG00000168904.15	ENST00000561276.5	967	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	30.2177284240744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTAGTTTTGTGGCTT	2	True	NA	NA	False	NA	NA	NA	99251519	99386035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99251542_99255897_99255974_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34483.known	chr15	+	5852	10	FSM	ENSG00000168904.15	ENST00000301981.8	5852	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	12.6227308191743	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGAGTTTTGTGGTGTTT	3	True	NA	NA	False	NA	NA	NA	99251480	99390729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34486.known	chr15	+	1235	9	FSM	ENSG00000168904.15	ENST00000447360.6	1235	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	28.0131107697806	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	27	True	NA	24	True	AATATA	-20	NA	99251504	99386296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
transcript_34487.nnic	chr15	+	1244	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	31.5228092022269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	-29	True	NA	24	True	AATATA	-20	NA	99251448	99386296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34488.nic	chr15	+	1410	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	27.4451156856735	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	-29	True	NA	24	True	AATATA	-20	NA	99251448	99386296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_99251542_99255897_99256126_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_34494.nic	chr15	+	1250	8	NIC	ENSG00000168904.15	novel	1235	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	34.8670945981205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	-29	True	NA	24	True	AATATA	-20	NA	99251448	99386296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr15_+_99251542_99255897_99256126_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
transcript_34503.known	chr15	-	2672	3	FSM	ENSG00000183060.16	ENST00000409796.5	2672	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	26.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	65	False	NA	-11	True	AATAAA	-24	NA	99733339	99727404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_99729732_99731717_99732008_99733284
transcript_34504.known	chr15	-	2710	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	11	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-33	True	NA	-11	True	AATAAA	-24	NA	99733437	99727404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_99729732_99731717_99732008_99733344
transcript_34506.known	chr15	-	2431	2	FSM	ENSG00000183060.16	ENST00000545021.2	2431	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	-40	False	NA	-7	True	AATAAA	-28	NA	99733444	99727400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_99729732_99733344
transcript_34507.known	chr15	+	760	4	FSM	ENSG00000259363.6	ENST00000560059.6	760	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTACTTTAGGTGAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	99806984	99839086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_99807099_99808146_99808303_99812972_99813087_99838710
transcript_34511.known	chr15	+	1694	5	FSM	ENSG00000183475.13	ENST00000343276.4	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.08431365765238	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGATTTCATAAAAAT	44	True	NA	NA	False	AATAAA	-19	NA	100602608	100630209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436
transcript_34512.known	chr15	-	1612	5	FSM	ENSG00000140471.17	ENST00000561308.5	1612	5	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_4	10.917302780449	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTGTTGAGTC	4	True	NA	NA	False	AATGAA	-31	NA	100602171	100573414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602120
transcript_34515.known	chr15	+	3469	13	FSM	ENSG00000184254.17	ENST00000329841.10	3469	13	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	8.29114319955671	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTTTTTCATTTAA	-1	True	NA	7	True	AATAAA	-18	NA	100879830	100916626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100892509_100892640_100892944_100893007_100893953_100894083_100895932_100896047_100898082_100898186_100900574_100900760_100905522_100905688_100907120_100907279_100908407_100908483_100914700
transcript_34517.known	chr15	-	1439	7	FSM	ENSG00000131871.15	ENST00000398226.7	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	344.908079541975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCAGGAGTGTCCA	8	True	NA	NA	False	NA	NA	NA	101277450	101270816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101271646_101272763_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_34521.known	chr15	-	1218	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_3	89.0721056223552	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTACTTATTTCTCT	-27	True	NA	-8	True	ATTAAA	-21	NA	101277485	101272190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_34524.known	chr15	-	355	2	FSM	ENSG00000131871.15	ENST00000534014.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAATA	5	True	NA	NA	False	AGTAAA	-35	NA	101277453	101276432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101276676_101277341
transcript_34529.known	chr15	-	1052	9	FSM	ENSG00000131876.18	ENST00000254193.11	1052	9	0	0	0	0	multi-exon	FALSE	canonical	3	2311	junction_3	231.296887138586	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-15	True	NA	-9	True	AATAAA	-22	NA	101295248	101281509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_34538.known	chr15	-	924	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	980.736437165293	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	87	False	NA	-13	True	AATAAA	-18	NA	101295204	101281513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_34541.known	chr15	-	2108	7	FSM	ENSG00000131876.18	ENST00000558036.5	2108	7	0	0	0	0	multi-exon	FALSE	canonical	3	2560	junction_2	163.346683127907	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	9	False	NA	-13	True	AATAAA	-18	NA	101295282	101281513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_34543.known	chr15	-	556	6	FSM	ENSG00000131876.18	ENST00000394082.8	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	1316.29033271539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGTGTTAGCAAAGT	88	False	NA	NA	False	NA	NA	NA	101295203	101281653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101295096
transcript_34544.known	chr15	-	506	5	FSM	ENSG00000131876.18	ENST00000540017.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1402.32752950229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAATAGGCCCTCTTG	-22	True	NA	NA	False	NA	NA	NA	101295255	101281708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101295096
transcript_34546.known	chr15	-	509	2	FSM	ENSG00000131876.18	ENST00000561187.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	2749	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAATGAGAAATGAACT	20	False	NA	NA	False	AATACA	-9	NA	101295271	101292838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101293173_101295096
transcript_34547.known	chr15	-	1353	6	FSM	ENSG00000184277.13	ENST00000559107.5	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	111.575266076313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-5	True	NA	NA	False	NA	NA	NA	101652384	101632976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_34548.known	chr15	-	1395	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	94.3029161797237	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGCCTGTTTTCTA	-2	True	NA	63	True	AATAAA	-17	NA	101652381	101641847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_34549.known	chr15	-	1267	5	FSM	ENSG00000184277.13	ENST00000428002.6	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	109.964767084735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	3	True	NA	NA	False	NA	NA	NA	101652376	101632976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_34550.known	chr15	-	1329	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	37.3162163140906	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	-12	True	NA	65	True	AATAAA	-19	NA	101652391	101641845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_34553.known	chr15	-	503	3	FSM	ENSG00000259658.5	ENST00000558592.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	101745710	101737098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101737370_101744440_101744597_101745634
transcript_34554.known	chr15	-	517	3	FSM	ENSG00000259658.5	ENST00000635726.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	101746870	101737098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_-_101737370_101744440_101744597_101746780
transcript_34555.known	chr15	+	1187	3	FSM	ENSG00000248893.3	ENST00000507796.3	1187	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	101954884	101956412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_101955246_101955484_101955690_101955791
transcript_34558.known	chr15	+	427	3	FSM	ENSG00000185596.16	ENST00000559884.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAACTCACACTTCAT	-4	True	NA	NA	False	TATAAA	-24	NA	101961602	101966755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr15_+_101961642_101966069_101966224_101966521
transcript_34559.nic	chr15	+	1749	2	ISM	ENSG00000185596.16	ENST00000559884.5	427	3	3	-1027	2	1027	intron_retention	FALSE	canonical	3	285	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAAAGGAATGGAACAG	-1	True	NA	NA	False	ATTAAA	-11	NA	101961605	101967782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr15_+_101961642_101966069
transcript_34560.known	chr16	+	1054	2	FSM	ENSG00000231439.4	ENST00000527434.1	1054	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	22909	25123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23086_24245
transcript_34561.known	chr16	-	1372	3	FSM	ENSG00000161980.6	ENST00000293860.6	1372	3	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_2	25.5	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATGTTGATCAGTTCC	9	True	NA	NA	False	NA	NA	NA	53608	46406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_47558_51557_51646_53475
transcript_34563.known	chr16	+	831	6	FSM	ENSG00000161981.11	ENST00000397876.6	831	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	461.838326690196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAATGCCCTAGTCACA	28	True	NA	-61	True	NA	NA	NA	53886	57372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_54059_55458_55550_55776_55883_56320_56421_56538_56614_57085
transcript_34565.known	chr16	+	1085	5	FSM	ENSG00000161981.11	ENST00000383018.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_2	50.8004675175337	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGCTCACAGTGGC	-30	True	NA	13	True	AATAAA	-24	NA	53828	57668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
transcript_3457.known	chr1	+	604	5	FSM	ENSG00000132780.17	ENST00000464190.6	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	1285	junction_3	50.0899191454728	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCCTAAGATGCTT	-2	True	NA	NA	False	GGGGCT	-15	NA	45584040	45606680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481
transcript_34572.known	chr16	-	2784	12	FSM	ENSG00000103148.17	ENST00000399953.7	2784	12	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_9	36.7558394753431	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	185	False	NA	-44	True	AATAAA	-32	NA	138512	85800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149
transcript_34573.known	chr16	+	1036	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	29.2612751298063	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTAGCCAGAGCTC	-12	True	NA	28	True	AATAAA	-19	NA	78224	85846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78334_79424_79701_83051_83257_85400
transcript_34574.known	chr16	+	1193	5	FSM	ENSG00000103152.12	ENST00000219431.4	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	223.804602276182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	20	True	NA	24	True	AATAAA	-15	NA	78256	85842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78334_79138_79332_79424_79701_83051_83257_85400
transcript_34575.known	chr16	+	513	3	FSM	ENSG00000188536.13	ENST00000397806.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	12	False	NA	NA	False	AATAAA	-17	NA	172889	173710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_172959_173124_173330_173471
transcript_34576.known	chr16	+	576	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	-2	True	NA	NA	False	AATAAA	-17	NA	172875	173710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_173008_173124_173330_173471
transcript_34577.known	chr16	+	577	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	0	True	NA	NA	False	AATAAA	-17	NA	176679	177522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_176812_176928_177134_177282
transcript_34578.known	chr16	+	528	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	-10	True	NA	9	True	AGTAAA	-17	NA	180458	181179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_180582_180665_180871_180979
transcript_34594.known	chr16	-	1520	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	185.28356645963	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCCTCTGCGTAGAG	-19	True	NA	-16	True	AATAAA	-38	NA	229450	188974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_34599.known	chr16	-	989	11	FSM	ENSG00000007392.17	ENST00000418978.5	989	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	232.200538328403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGCGTCGGAGGCGGTCA	5305	False	NA	NA	False	NA	NA	NA	229374	190121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_3460.known	chr1	+	1036	5	FSM	ENSG00000132780.17	ENST00000470768.5	1036	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	550.252896403099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGTAGAGGCTGGAT	18	False	NA	NA	False	NA	NA	NA	45584060	45607972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45604935_45605017_45606481_45606592_45607320
transcript_34601.known	chr16	-	1504	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	140.795973567569	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTGCGTAGAGGCTT	5216	False	NA	-12	True	AATAAA	-42	NA	229463	188970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_34606.known	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	70.1465837363199	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-18	True	NA	-31	True	AATAAA	-23	NA	229449	188989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_34611.known	chr16	-	1211	10	FSM	ENSG00000007392.17	ENST00000419516.5	1211	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	195.092254214054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-3	True	NA	NA	False	NA	NA	NA	229434	189895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_3462.known	chr1	+	532	4	FSM	ENSG00000132780.17	ENST00000527470.5	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	561.381035186144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCTCTGAAGAGGCAAAA	2	True	NA	-94	True	AAAAAG	-28	NA	45584044	45607533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45606481_45606592_45607320
transcript_34622.known	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_8	72.4530020081984	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	5216	False	NA	-10	True	AATAAA	-44	NA	229463	188968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_34630.known	chr16	-	423	3	FSM	ENSG00000007392.17	ENST00000442701.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTAGTTTAAAATTT	NA	False	NA	-37	True	AATACA	-6	NA	190549	189114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_189340_189946_190136_190540
transcript_34637.nnic	chr16	+	2908	13	NNC	ENSG00000167930.17	novel	2909	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	245.357038596591	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	-23	True	NA	15	True	AATAAA	-23	NA	234794	266096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262199_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_34638.known	chr16	+	2909	13	FSM	ENSG00000167930.17	ENST00000399932.8	2909	13	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	93.3518954756083	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	3	True	NA	15	True	AATAAA	-23	NA	234820	266096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_34640.nic	chr16	+	2908	13	NIC	ENSG00000167930.17	novel	2909	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_4	230.202567801105	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	-23	True	NA	15	True	AATAAA	-23	NA	234794	266096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259995_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_34646.known	chr16	+	964	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	4.58693797647189	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTCGTCTCTTT	-7	True	NA	14	True	ATTAAA	-22	NA	280590	283010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
transcript_3465.known	chr1	+	2080	12	FSM	ENSG00000132780.17	ENST00000453748.5	2080	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	793.021765565837	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAATTGAGGAACT	2	True	NA	-35	True	ACTAAA	-41	NA	45584044	45615354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45584206_45591222_45591271_45600384_45600458_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304
transcript_34656.nnic	chr16	-	1113	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	724.921402636175	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	5778	False	NA	-21	True	AGTAAA	-16	NA	370389	367393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370335
transcript_34657.known	chr16	-	800	6	FSM	ENSG00000086504.18	ENST00000441883.5	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	720.756824456071	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTCAGAGCCGGCGG	5735	False	NA	NA	False	NA	NA	NA	370432	367723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370361
transcript_34658.nnic	chr16	-	1111	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	737.936203204586	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	5714	False	NA	-21	True	AGTAAA	-16	NA	370453	367393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370401
transcript_3466.known	chr1	-	3641	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_12	132.909404190306	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	4	True	NA	-17	True	AATAAA	-27	NA	45686533	45627303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
transcript_34660.nic	chr16	-	1124	6	NIC	ENSG00000086504.18	novel	1524	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	692.160674988113	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	-1	True	NA	-21	True	AGTAAA	-16	NA	370508	367393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370443
transcript_34661.known	chr16	-	865	6	FSM	ENSG00000086504.18	ENST00000389675.6	865	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	724.456320284391	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACAGATCCCGGGGAG	-2	True	NA	NA	False	NA	NA	NA	370509	367612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370484
transcript_34662.known	chr16	-	1524	6	FSM	ENSG00000086504.18	ENST00000199706.13	1524	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	674.004747757759	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGTGTTGGGATTACA	-4	True	NA	-47	True	NA	NA	NA	370538	366968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370498
transcript_34666.known	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	521.5363721736	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-2	True	NA	-11	True	AGTAAA	-26	NA	370509	367383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
transcript_34672.known	chr16	+	1551	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	42.3489964461969	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATCGTTTAGGGGTTGT	-1	True	NA	13	True	ATTAAA	-16	NA	401884	412482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_34678.known	chr16	+	1167	6	FSM	ENSG00000103202.13	ENST00000448828.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1062.96464663694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTTTGCACACCCA	3	True	NA	0	True	AGTAAA	-1	NA	397198	400734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
transcript_34684.known	chr16	+	1232	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	972.644944211401	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	-2	True	NA	12	True	AGTAAA	-13	NA	396724	400746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
transcript_34686.known	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	939.572608955795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	2	True	NA	22	True	ATTAAA	-18	NA	397236	400648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
transcript_34688.known	chr16	+	1000	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_1	233.536934980315	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	3	True	NA	20	True	AGTAAA	-21	NA	397198	400754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
transcript_34690.known	chr16	+	985	5	FSM	ENSG00000103202.13	ENST00000450036.1	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	959.771164132368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAACCTGCCTGTCCCAA	450	False	NA	NA	False	NA	NA	NA	397741	400416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_398180_398989_399124_399378_399481_399626_399740_400218
transcript_34692.known	chr16	+	904	4	FSM	ENSG00000103202.13	ENST00000621774.4	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_2	882.056813488917	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	-4	True	NA	19	True	AGTAAA	-20	NA	397191	400753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_397314_398989_399124_399626_399740_400218
transcript_34695.known	chr16	+	2071	2	FSM	ENSG00000257108.2	ENST00000540585.1	2071	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	-16	True	NA	NA	False	AATAAA	-16	NA	567004	569495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_567076_567495
transcript_34696.known	chr16	+	2096	2	FSM	ENSG00000257108.2	ENST00000424439.3	2096	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	-16	True	NA	NA	False	AATAAA	-16	NA	567004	569495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_567076_567470
transcript_34697.known	chr16	-	755	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	354.823110859482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACAGCCCCACCCAGTC	95	False	NA	-101	True	NA	NA	NA	636239	634512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
transcript_34698.known	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	320.420036826663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	3	True	NA	-90	True	NA	NA	NA	636331	634501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
transcript_34699.known	chr16	-	518	5	FSM	ENSG00000130731.16	ENST00000564039.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	434.121742717409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTGATCTTCCGG	56	False	NA	NA	False	NA	NA	NA	636278	634625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_636093
transcript_34702.known	chr16	-	604	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	448.718421977772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGCTTGCTGGTGTC	-17	True	NA	-26	True	AATAAA	-10	NA	636351	634437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_634645_634718_634798_635280_635341_636093
transcript_34703.known	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	165.25283658685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	13	True	NA	-14	True	GGGGCT	-5	NA	642450	648437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
transcript_34705.known	chr16	+	1728	1	FSM	ENSG00000172366.20	ENST00000575894.1	1728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	3844	False	NA	23	True	AATAAA	-15	NA	646746	648474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_646700_648500
transcript_34709.known	chr16	+	2490	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_10	159.400961937708	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	13	True	NA	12	True	NA	NA	NA	668131	674171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_3471.known	chr1	-	3599	12	FSM	ENSG00000159592.11	ENST00000290795.7	3599	12	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_11	133.001273839671	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	1	True	NA	-17	True	AATAAA	-27	NA	45686536	45627303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686411
transcript_3472.nic	chr1	-	3591	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_11	166.491307196204	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-9	True	NA	-17	True	AATAAA	-27	NA	45687109	45627303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_34728.nic	chr16	+	2566	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-13	0	intron_retention	TRUE	canonical	3	809	junction_9	111.054243424999	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	NA	False	NA	28	True	ATTAAA	-19	NA	668091	674125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34731.nic	chr16	+	2549	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-13	0	intron_retention	FALSE	canonical	3	211	junction_6	242.023519689812	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	NA	False	NA	28	True	ATTAAA	-19	NA	668091	674125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34735.nic	chr16	+	2430	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-13	0	intron_retention	FALSE	canonical	3	104	junction_4	285.252816901381	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	NA	False	NA	28	True	ATTAAA	-19	NA	668091	674125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_3474.nic	chr1	-	3402	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	24	-189	combination_of_known_junctions	FALSE	canonical	3	137	junction_11	166.491307196204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	-9	True	NA	-60	True	AATAAA	-15	NA	45687109	45627492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_34746.nic	chr16	+	2585	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-13	0	intron_retention	FALSE	canonical	3	83	junction_8	269.076015920687	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	NA	False	NA	28	True	ATTAAA	-19	NA	668091	674125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670773_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34785.known	chr16	+	2559	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_5	259.685609761024	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	16	True	NA	15	True	NA	NA	NA	668134	674174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_34786.known	chr16	+	1458	8	FSM	ENSG00000103269.14	ENST00000352681.8	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.20883424647321	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	-13	True	NA	15	True	AATAAA	-15	NA	675670	678268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
transcript_34787.known	chr16	-	1015	8	FSM	ENSG00000161999.13	ENST00000562824.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	180.855788755933	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	9769	False	NA	NA	False	CATAAA	-33	NA	684363	682527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684233
transcript_34788.known	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_4	50.1386965216377	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	-5	True	NA	12	True	NA	NA	NA	680409	682801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_34791.known	chr16	-	3243	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_8	23.2002155162404	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-13	True	NA	-8	True	AATAAA	-15	NA	690398	684621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_34793.known	chr16	-	2095	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	17.7471124411832	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	1	True	NA	-14	True	AATAAA	-19	NA	740997	729764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
transcript_34795.nnic	chr16	-	1994	10	NIC	ENSG00000103245.14	novel	2095	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	41.4812169303733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCTACGAAAACAGCTCC	NA	False	NA	-15	True	AATAAA	-18	NA	741016	729765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734736_734872_736265_736399_737185_737330_739642_739739_740919
transcript_3480.known	chr1	-	1947	10	FSM	ENSG00000197429.11	ENST00000359942.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.3628275961788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTCAGGGATTTTCA	-6	True	NA	NA	False	CATAAA	-38	NA	45750650	45694323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45694516_45700069_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_34800.nic	chr16	+	743	4	ISM	ENSG00000103253.19	ENST00000389701.9	1295	7	1067	0	-39	0	3prime_fragment	FALSE	canonical	0	0	junction_2	107.079409785448	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	685	False	NA	9	True	AATAAA	-14	NA	728471	729715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_728605_728793_728896_729008_729089_729287
transcript_34801.known	chr16	+	870	5	FSM	ENSG00000103254.10	ENST00000569529.6	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_4	25.3870045495722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	-19	True	NA	17	True	GATAAA	-17	NA	721145	722590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_721437_721597_721703_721800_721942_722083_722135_722308
transcript_34803.nnic	chr16	-	902	3	NNC	ENSG00000103245.14	novel	499	2	NA	NA	-1	-368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATTAAAATTCACCTG	NA	False	NA	NA	False	AAAAAG	-1	NA	741016	738348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_738701_739285_739739_740919
transcript_34805.known	chr16	+	4494	19	FSM	ENSG00000127586.17	ENST00000471202.5	4494	19	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	135.44740676735	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	-23	True	NA	27	True	TATAAA	-21	NA	788634	798072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790006_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_34809.known	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	15.3231850475024	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-12	True	NA	-3	True	NA	NA	NA	970984	853633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
transcript_34816.known	chr16	+	3109	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	934.562912133096	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-24	True	NA	20	True	ATTAAA	-15	NA	1309634	1327018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34818.known	chr16	+	2832	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	786.541303570399	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-12	True	NA	20	True	ATTAAA	-15	NA	1309152	1327018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34819.known	chr16	+	3253	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	794.942083844268	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	NA	False	NA	20	True	ATTAAA	-15	NA	1308879	1327018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34822.known	chr16	+	2850	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	199.951382979852	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	-23	True	NA	19	True	ATTAAA	-14	NA	1309635	1327017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_34827.known	chr16	+	1771	4	FSM	ENSG00000103275.21	ENST00000473256.6	1771	4	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	120.66850827324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	-23	True	NA	NA	False	NA	NA	NA	1309635	1317125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653
transcript_34828.known	chr16	-	1210	6	FSM	ENSG00000007520.4	ENST00000007390.3	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_5	78.0138449251157	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	-32	True	NA	-6	True	AATGAA	-16	NA	1351878	1349239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1349609_1349888_1349953_1350057_1350235_1350806_1351001_1351378_1351599_1351692
transcript_34829.known	chr16	+	1975	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	27.9291961932312	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGTAGCACAAAATATA	-16	True	NA	5	True	AATAAA	-20	NA	1351930	1364113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_34830.known	chr16	+	2185	10	FSM	ENSG00000090581.11	ENST00000683366.1	2185	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	117.155273140783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	-7	True	NA	NA	False	GATAAA	-31	NA	1351939	1364387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_34833.known	chr16	-	1431	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5463442476886	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAGTAGAGGATTTTGT	5986	False	NA	NA	False	AATAAA	-17	NA	1414751	1398304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_34836.known	chr16	-	917	2	FSM	ENSG00000174109.5	ENST00000442039.3	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-10	True	NA	-7	True	AATAAA	-22	NA	1420747	1419751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1420613_1420691
transcript_34837.known	chr16	-	1005	1	FSM	ENSG00000174109.5	ENST00000563974.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-19	True	NA	-7	True	AATAAA	-22	NA	1420756	1419751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1419800_1420800
transcript_34838.known	chr16	+	3314	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	77.7718458055356	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	-13	True	NA	NA	False	AATAAA	-15	NA	1493359	1510454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_3484.known	chr1	-	3117	9	FSM	ENSG00000197429.11	ENST00000396478.4	3117	9	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	10.1242283656583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTCCTTTTTTGCTA	-9	True	NA	NA	False	AAAAAG	-7	NA	45750653	45698710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_34843.known	chr16	+	593	6	FSM	ENSG00000206053.13	ENST00000566742.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	385.052412016858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACACCTGTCCAATT	6	True	NA	NA	False	NA	NA	NA	1678289	1700225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810_1698844_1700073
transcript_34846.known	chr16	+	3185	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	435.157167009806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	-7	True	NA	88	True	NA	NA	NA	1678276	1701490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_34849.known	chr16	+	3695	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_4	50.4430371805664	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	-5	True	NA	25	True	AATAAA	-32	NA	1678278	1702086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_34855.known	chr16	+	1065	4	FSM	ENSG00000206053.13	ENST00000561516.5	1065	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	431.008893953091	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGCCCTGACCCTCT	-5	True	NA	44	True	NA	NA	NA	1678278	1699599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1685438_1685588_1697811_1697861_1698810
transcript_34858.known	chr16	+	911	4	FSM	ENSG00000206053.13	ENST00000569256.5	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	416.240582142374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCCATTCTGGAGA	7445	False	NA	NA	False	NA	NA	NA	1678255	1699428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1678357_1691842_1691986_1697811_1697861_1698810
transcript_34864.known	chr16	-	811	5	FSM	ENSG00000103024.8	ENST00000564628.1	811	5	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	167.765461284497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	1975	False	NA	-6	True	AATAAA	-40	NA	1771495	1770319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771268_1771411_1771488
transcript_34865.known	chr16	-	848	5	FSM	ENSG00000103024.8	ENST00000219302.8	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_4	28.4868390664882	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-13	True	NA	-6	True	AATAAA	-40	NA	1771543	1770319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279_1771411_1771488
transcript_34868.known	chr16	+	1049	8	FSM	ENSG00000095906.17	ENST00000565987.5	1049	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	289.107846553454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCGCTTTCCAGGGCC	25	True	NA	NA	False	NA	NA	NA	1782989	1788726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1783876_1784067_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34872.known	chr16	+	1349	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	113.831259131908	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	-5	True	NA	18	True	ATTAAA	-25	NA	1782959	1789186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34877.known	chr16	-	1535	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_6	78.0628308195107	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-18	True	NA	-2	True	AATAAA	-25	NA	1782571	1776711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
transcript_34879.known	chr16	+	815	6	FSM	ENSG00000095906.17	ENST00000565134.5	815	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	119.210066689018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGACTTCATCCAGGAG	42	True	NA	NA	False	NA	NA	NA	1783006	1788613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788208_1788568
transcript_34881.known	chr16	+	1173	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	168.872259415216	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	-33	True	NA	13	True	ATTAAA	-20	NA	1782931	1789181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34882.known	chr16	+	582	6	FSM	ENSG00000095906.17	ENST00000569898.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	277.48225168468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGGACGCGACGCCCG	34	True	NA	NA	False	NA	NA	NA	1782998	1788680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788160_1788208_1788568
transcript_34883.known	chr16	+	995	6	FSM	ENSG00000095906.17	ENST00000565603.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	113.73899946808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGAAACAGAGGCCT	31	True	NA	NA	False	NA	NA	NA	1782995	1788767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34885.known	chr16	-	2316	6	FSM	ENSG00000162032.16	ENST00000564709.5	2316	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	157.923272509152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGGCGTGAGCTGAAAC	2	True	NA	-4	True	AATAAA	-23	NA	1782505	1776713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1781765
transcript_34886.known	chr16	-	1628	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_5	80.3328077437855	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-4	True	NA	-8	True	AATAAA	-19	NA	1782557	1776717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
transcript_34892.known	chr16	+	2196	5	FSM	ENSG00000095906.17	ENST00000567700.5	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	41.2128620699898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGATGTTTCTAGAGT	-33	True	NA	15	True	ATTAAA	-22	NA	1782931	1789183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1783037_1786536_1787832_1787940_1788052_1788137_1788208_1788568
transcript_34894.known	chr16	-	1746	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	88.0379889593123	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACCCACATGGCGTGA	NA	False	NA	-12	True	AATAAA	-15	NA	1782594	1776721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
transcript_34898.known	chr16	-	1781	4	FSM	ENSG00000162032.16	ENST00000569380.5	1781	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	101.6267681273	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	1	True	NA	-8	True	AATAAA	-19	NA	1782552	1776717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1777444_1777746_1778613_1781357_1781496_1782501
transcript_34900.known	chr16	-	713	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	2723	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGTCGTGGTGTCTT	33	True	NA	-10	True	AATAAA	-13	NA	1772698	1771895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1772514_1772603
transcript_34901.known	chr16	-	1257	10	FSM	ENSG00000063854.13	ENST00000397353.6	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	77.9387223685662	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTGCAGACTGTTT	-24	True	NA	-5	True	NA	NA	NA	1826841	1809102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826506_1826603_1826711
transcript_34902.known	chr16	+	1845	2	FSM	ENSG00000180185.12	ENST00000382668.8	1845	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTTTCAATTTTTGAA	21	False	NA	NA	False	AATAAA	-16	NA	1826966	1840207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1827866_1839261
transcript_34903.known	chr16	+	1974	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAGGGTAATTTTTTT	-5	True	NA	27	True	AATAAA	-20	NA	1826940	1828914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1826900_1828900
transcript_34904.known	chr16	-	1363	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	-94	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	142.037847069012	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGTCTTTTTTTTTG	9625	False	NA	-10	True	AATGAA	-9	NA	1943293	1938233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_1939144_1940777_1940812_1940814_1940893_1941256_1941406_1943101
transcript_34905.known	chr16	-	550	5	FSM	ENSG00000198736.13	ENST00000564908.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	156.814380718096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGACGGCCACCACAC	-2	True	NA	NA	False	AAGAAA	-41	NA	1943199	1939094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1939144_1940777_1940893_1941028_1941168_1941256_1941406_1943101
transcript_34906.known	chr16	-	1277	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	18.1842422626478	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTGTTTTG	-2	True	NA	-5	True	AATGAA	-14	NA	1943199	1938228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
transcript_34907.known	chr16	-	373	3	FSM	ENSG00000198736.13	ENST00000473663.1	373	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACTCATTTGCTGA	9795	False	NA	-7	True	NA	NA	NA	1943123	1938941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1939144_1941256_1941406_1943101
transcript_34909.known	chr16	+	628	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	1195.47823996182	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	10	True	NA	26	True	TATAAA	-14	NA	1959551	1961975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
transcript_3491.known	chr1	+	1465	3	FSM	ENSG00000159596.7	ENST00000372025.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	7	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	-6	True	NA	11	True	ATTAAA	-15	NA	45688180	45694436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45688276_45690973_45691111_45693203
transcript_34910.known	chr16	+	495	4	FSM	ENSG00000140990.15	ENST00000570172.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	1311.01597583282	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGGCAGAGGATGCT	16	True	NA	NA	False	NA	NA	NA	1959557	1961840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961292_1961496_1961612_1961796
transcript_34911.known	chr16	+	675	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	2364	junction_3	225.700391374642	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	-4	True	NA	26	True	TATAAA	-14	NA	1959537	1961975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
transcript_34912.known	chr16	+	830	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	2740	junction_1	81.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1	True	NA	26	True	TATAAA	-14	NA	1959542	1961975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152_1961292_1961496
transcript_34914.known	chr16	+	958	2	FSM	ENSG00000140990.15	ENST00000565031.1	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	2740	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGGCAGCTGTGGGT	2	True	NA	-50	True	NA	NA	NA	1959543	1961899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1959755_1961152
transcript_34918.known	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_4	11939.2473241267	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-5	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
transcript_34925.known	chr16	-	170	3	FSM	ENSG00000140988.16	ENST00000563194.1	170	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	8497.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTTGAAGATTATGCC	NA	False	NA	NA	False	NA	NA	NA	1964841	1963211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1963257_1964275_1964366_1964806
transcript_34926.known	chr16	+	275	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	60	0	60	0	multi-exon	FALSE	canonical	3	570	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCGGGTGTTCTTGGG	7	True	NA	20	True	AATAAA	-20	NA	1964958	1965509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1965130_1965405
transcript_34927.known	chr16	-	242	1	FSM	ENSG00000277602.1	ENST00000618631.1	242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTATTGAGCACCTT	9572	False	NA	NA	False	AATAAA	-19	NA	1971896	1971654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_1971700_1971900
transcript_34930.known	chr16	+	6783	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_10	35.9624394633372	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	-21	True	NA	NA	False	NA	NA	NA	1972052	1982929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_34934.known	chr16	+	2472	26	NNC	ENSG00000183751.16	novel	6783	22	NA	NA	23	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	230.051416861536	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGGTCCGGCCTCTCTCC	35	True	NA	14	True	CATAAA	-14	NA	1972108	1978683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977177_1977177_1977285_1977355_1977378_1977378_1977382_1977382_1977427_1977513_1977608_1977611_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978314_1978472_1978551
transcript_34935.known	chr16	+	2365	3	FSM	ENSG00000127554.13	ENST00000248114.7	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	13	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	-10	True	NA	10	True	AATAAA	-20	NA	1984192	1987749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1984477_1984746_1984944_1985865
transcript_34936.known	chr16	+	483	2	FSM	ENSG00000127554.13	ENST00000567719.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTCTCAGTTGGG	9	True	NA	26	True	ATTAAA	-18	NA	1984710	1986115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_1984944_1985865
transcript_3494.nnic	chr1	+	1468	3	NNC	ENSG00000159596.7	novel	1465	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	803	False	NA	11	True	ATTAAA	-15	NA	45688155	45694436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_45688254_45690973_45691111_45693203
transcript_34940.known	chr16	-	1030	6	FSM	ENSG00000065057.9	ENST00000651570.2	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_3	20.1553962997506	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-4	True	NA	-7	True	AATAAA	-18	NA	2047834	2039819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
transcript_34941.nnic	chr16	-	1054	6	NNC	ENSG00000065057.9	novel	1030	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	241.531447227892	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-3	True	NA	-7	True	AATAAA	-18	NA	2047833	2039819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046392_2047708
transcript_34942.known	chr16	-	837	6	FSM	ENSG00000065057.9	ENST00000568513.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	253.299822344983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	36	False	NA	-8	True	AATAAA	-17	NA	2047794	2039820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046279_2046367_2047708
transcript_34944.known	chr16	-	802	5	FSM	ENSG00000065057.9	ENST00000651583.1	802	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	272.87726178632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	52	False	NA	-8	True	AATAAA	-17	NA	2047778	2039820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2046127_2046367_2047708
transcript_34947.known	chr16	+	3388	10	FSM	ENSG00000103197.18	ENST00000569930.2	3388	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	47.0542109213628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGAGGCACAGATTGCA	3008	False	NA	21	True	AATAAA	-25	NA	2081929	2088692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_3495.known	chr1	+	722	2	FSM	ENSG00000159596.7	ENST00000496366.1	722	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAGTAGTTAAAAGTAG	9	True	NA	NA	False	NA	NA	NA	45688195	45693845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_45688276_45693203
transcript_34950.known	chr16	+	2793	4	FSM	ENSG00000103197.18	ENST00000461648.3	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	7.78888096369861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGCTTGAAACCGGAA	2	True	NA	NA	False	NA	NA	NA	2047984	2055799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341
transcript_34951.known	chr16	-	342	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	5	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTCAAGTGTCTTTA	-4	False	NA	0	True	AATAAA	-23	NA	2155358	2154796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2154923_2155142
transcript_34952.known	chr16	+	3683	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	0	0	0	0	multi-exon	TRUE	canonical	3	1002	junction_1	81.8256683443527	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	-5	True	NA	10	True	AATAAA	-21	NA	2155781	2178129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
transcript_34955.known	chr16	+	666	4	FSM	ENSG00000131653.13	ENST00000567653.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	104.260357865405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTTGCTGCTGGGTA	17	True	NA	6	True	AATAAA	-16	NA	2155803	2168510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076
transcript_34956.nic	chr16	+	1634	9	NIC	ENSG00000167965.18	novel	1671	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_3	218.914937818322	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	-16	True	NA	16	True	AATAAA	-17	NA	2205452	2209397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_2205513_2206030_2206215_2206357_2206410_2206478_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34958.known	chr16	+	1671	9	FSM	ENSG00000167965.18	ENST00000569417.6	1671	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	142.176771573278	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGCGAGGGTGCCG	-15	True	NA	30	True	GATAAA	-19	NA	2205453	2209453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34961.known	chr16	+	1861	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	171.797437044328	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	15	True	AATAAA	-16	NA	2205176	2209396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34963.known	chr16	+	1691	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	135.959035650449	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	-8	True	NA	16	True	AATAAA	-17	NA	2205740	2209397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34964.known	chr16	+	1588	9	FSM	ENSG00000167965.18	ENST00000565250.1	1588	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	180.396784893745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGGCTCAGTCTGGGA	20	True	NA	-29	True	NA	NA	NA	2205768	2209352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_34965.known	chr16	+	1735	8	FSM	ENSG00000167965.18	ENST00000301724.14	1735	8	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	150.62427914977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGTCGATGCAGAGAT	25	False	NA	-11	True	AATAAA	-32	NA	2205493	2209412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449
transcript_34968.known	chr16	+	1403	8	FSM	ENSG00000167965.18	ENST00000565330.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	147.836230405162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGGCTAGCCTGCACT	-15	True	NA	NA	False	NA	NA	NA	2205453	2209098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2205513_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_3497.known	chr1	-	5174	11	FSM	ENSG00000117461.15	ENST00000420542.5	5174	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	30.6568100101756	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGTCTTCATGCTA	295	False	NA	NA	False	AATAAA	-17	NA	46133036	46040141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846_46131957_46132783
transcript_34976.known	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1544	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-28	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2214054_2214137
transcript_34977.known	chr16	+	2548	14	FSM	ENSG00000167967.16	ENST00000301727.9	2548	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	21.2947753127687	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	-6	True	NA	15	True	AATAAA	-16	NA	2223590	2235742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_34978.known	chr16	-	961	6	FSM	ENSG00000167969.13	ENST00000566379.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_5	52.5904934375026	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCCAGAAGTCCCTGC	-7	True	NA	NA	False	NA	NA	NA	2251591	2240036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315
transcript_3498.known	chr1	-	5596	10	FSM	ENSG00000117461.15	ENST00000262741.10	5596	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	15.6914697279198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTTCATGCTATG	19	True	NA	NA	False	AATAAA	-19	NA	46132629	46040139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846
transcript_34981.known	chr16	-	1951	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_7	744.902486427394	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGGGTTCACTGC	2	True	NA	75	True	AATAAA	-20	NA	2268126	2253119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
transcript_34983.known	chr16	-	2037	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_6	703.416582750854	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-5	True	NA	78	True	AATAAA	-23	NA	2268397	2253116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_34985.known	chr16	-	735	5	FSM	ENSG00000205937.12	ENST00000570051.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_4	833.016356382034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGGCTGCACTTCTT	14	True	NA	NA	False	GGGGCT	-14	NA	2268114	2262207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_34987.known	chr16	-	1826	1	FSM	ENSG00000205937.12	ENST00000566783.1	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	1518	False	NA	NA	False	NA	NA	NA	2267328	2265502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2265500_2267300
transcript_34988.known	chr16	+	543	2	FSM	ENSG00000260778.5	ENST00000563734.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGACCTGGGGTTT	NA	False	NA	13	True	AATAAA	-13	NA	2268154	2273418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2268266_2272986
transcript_34989.known	chr16	+	4230	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	54.0014105718545	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGATGGACGTCCTT	-2	True	NA	29	True	ATTAAA	-20	NA	2429446	2458854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_34990.nnic	chr16	+	2396	14	NNC	ENSG00000162063.13	novel	4230	17	NA	NA	-14	2919	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	143.855614662141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGCCTTCTGTGTCTA	-16	True	NA	14	True	TATAAA	-14	NA	2429432	2452794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2451934
transcript_34993.known	chr16	+	857	4	FSM	ENSG00000162063.13	ENST00000569093.1	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	69.6387503876653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGCTCCTTGAAAGAAA	0	True	NA	NA	False	NA	NA	NA	2429448	2436351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805
transcript_34997.known	chr16	+	1633	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	45.8583433447065	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	-14	True	NA	17	True	ATTAAA	-17	NA	2460108	2464963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_35.known	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00095_+_0_500
transcript_3500.nic	chr1	-	2452	23	NIC	ENSG00000085998.15	novel	2543	23	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	115.257275993412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	0	True	NA	-16	True	ATTAAA	-20	NA	46198428	46188682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_46188981_46189241_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_35000.known	chr16	+	1864	9	FSM	ENSG00000162062.15	ENST00000563531.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	48.4613247858537	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTTGTGTGATATTAAA	11	True	NA	-19	True	NA	NA	NA	2460133	2464927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_35004.nic	chr16	+	1563	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	73.1948384450707	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	1807	False	NA	17	True	ATTAAA	-17	NA	2460079	2464963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_35006.nic	chr16	+	1854	8	NIC	ENSG00000162062.15	novel	2156	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	34	junction_1	78.2286027340019	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	1807	False	NA	16	True	ATTAAA	-16	NA	2460079	2464962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_35007.known	chr16	+	3172	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_8	32.251511592482	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	-10	True	NA	27	True	AATACA	-22	NA	2520370	2531417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
transcript_3501.known	chr1	-	2719	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	49.1348738439858	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-6	True	NA	-16	True	ATTAAA	-20	NA	46198434	46188682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_35010.known	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_1	22	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	-10	True	NA	26	True	AATAAA	-15	NA	2513951	2520218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2514183_2519217_2519402_2519540
transcript_35011.known	chr16	-	2001	1	FSM	ENSG00000261613.2	ENST00000563449.2	2001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAAACGTTTATTTGT	NA	False	NA	NA	False	AATAAA	-33	NA	2556060	2554059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2554100_2556100
transcript_35013.nnic	chr16	+	896	4	NNC	ENSG00000215154.6	novel	2748	4	NA	NA	24	-1290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.8094285712381	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAATTTAAAAATGAAA	-1	True	NA	NA	False	ATTAAA	-45	NA	2603443	2629204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_2603728_2610461_2610585_2613959_2614069_2628824
transcript_35014.known	chr16	+	2748	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	7.31816613336672	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAATAAGTTACTA	5471	False	NA	NA	False	AATAAA	-23	NA	2603349	2630494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
transcript_35017.known	chr16	-	745	3	FSM	ENSG00000260565.8	ENST00000665778.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATCTTAGATATGATT	-4	True	NA	NA	False	AATAAA	-28	NA	2682378	2661192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2661375_2663083_2663408_2682139
transcript_35018.known	chr16	+	2434	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	30.6698549067321	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	-2	True	NA	16	True	AATAAA	-17	NA	2682522	2709030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
transcript_35020.known	chr16	+	9044	15	FSM	ENSG00000167978.17	ENST00000301740.13	9044	15	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_12	638.187580382995	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTGTAGACTGTTTA	-34	True	NA	18	True	AATAAA	-18	NA	2752637	2771412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
transcript_35022.known	chr16	-	582	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	3240.46470432869	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	2	True	NA	-8	True	AATAAA	-16	NA	2777277	2771413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
transcript_35028.known	chr16	+	461	4	FSM	ENSG00000167978.17	ENST00000576415.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	634.408911244685	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	42	True	NA	38	True	NA	NA	NA	2752713	2758524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469
transcript_3503.known	chr1	+	1849	2	FSM	ENSG00000171357.6	ENST00000371980.4	1849	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGGGATCTCACTTCC	-18	True	NA	10	True	AATAGA	-15	NA	46203333	46221256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46203625_46219698
transcript_35032.known	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	4933	junction_3	1502.92078596608	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-1	True	NA	-8	True	AATAAA	-16	NA	2777280	2771413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
transcript_35035.known	chr16	+	1759	3	FSM	ENSG00000167978.17	ENST00000574331.5	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	6.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	307	False	NA	16	True	AATAAA	-16	NA	2769373	2771410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2770466_2770603_2770718_2770857
transcript_35036.known	chr16	-	331	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	2272	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTTGCTGCCTCTTT	7	True	NA	-8	True	AATAAA	-16	NA	2777272	2771942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2772103_2776992_2777128_2777236
transcript_35037.known	chr16	-	997	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	7288	junction_1	636.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGCATTTCTCATTT	9410	False	NA	-9	True	AATAAA	-15	NA	2777195	2771414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2772103_2775450_2775557_2776992
transcript_35038.known	chr16	+	3250	1	FSM	ENSG00000276791.1	ENST00000621230.1	3250	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTTCTGTGCATCG	5335	False	NA	6	True	AATAAA	-15	NA	2777318	2780568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2777300_2780600
transcript_35039.known	chr16	-	761	3	FSM	ENSG00000263280.3	ENST00000662388.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGTCGGAGTACTCTG	NA	False	NA	NA	False	AATAAA	-38	NA	2868251	2866324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2866857_2867460_2867530_2868091
transcript_35040.known	chr16	-	667	2	FSM	ENSG00000263280.3	ENST00000575693.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTATTTTGCTTCAG	586	False	NA	NA	False	AATAAA	-15	NA	2867618	2866347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2866857_2867460
transcript_35041.known	chr16	+	990	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	31.3793987620328	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	-1	True	NA	12	True	AATAAA	-26	NA	2883214	2899365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
transcript_35042.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	418	junction_6	61.8595940416683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTCATGTGGCAACAT	1	True	NA	-23	True	AATAAA	-28	NA	2980446	2972807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_35043.known	chr16	-	1891	9	FSM	ENSG00000127564.17	ENST00000573944.5	1891	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	162.72671684453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGTGTCTAATAAAAAGT	-32	True	NA	-66	True	NA	NA	NA	2980479	2972850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979913_2980285
transcript_35044.known	chr16	+	1995	9	FSM	ENSG00000131650.14	ENST00000303746.10	1995	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.1840579525043	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	-1	True	NA	8	True	AATAAA	-16	NA	2964274	2968380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
transcript_35045.known	chr16	-	1892	9	FSM	ENSG00000127564.17	ENST00000574385.5	1892	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	208.437603073438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACCCAAGCTTGCTCA	23	True	NA	-34	True	AATAAA	-17	NA	2980424	2972818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979937_2980285
transcript_35046.known	chr16	+	1269	1	FSM	ENSG00000272079.2	ENST00000607794.2	1269	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCTGCCCAGGTGTA	1903	False	NA	6	True	AATAAA	-20	NA	3006119	3007388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3006100_3007400
transcript_35047.known	chr16	+	1583	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCTAATCTGTGCGC	0	True	NA	NA	False	AATAAA	-17	NA	3012922	3014505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3012900_3014500
transcript_35048.known	chr16	+	977	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	1214	junction_1	133.479087001173	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	-1	True	NA	23	True	AATAAA	-19	NA	3020367	3022383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
transcript_35049.known	chr16	+	881	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	719.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	-10	True	NA	23	True	AATAAA	-19	NA	3020358	3022383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3020492_3021554_3021690_3021770
transcript_35054.known	chr16	-	461	3	FSM	ENSG00000184697.7	ENST00000572154.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	1864	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACGTCCACCCCCCAG	6101	False	NA	NA	False	NA	NA	NA	3018170	3014856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3015182_3015928_3016043_3018148
transcript_35056.known	chr16	-	1366	2	FSM	ENSG00000184697.7	ENST00000328796.5	1366	2	0	0	0	0	multi-exon	FALSE	canonical	3	4055	junction_1	0	7575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTTGCAGCGGGTTA	0	True	NA	-30	True	AATAAA	-19	NA	3018183	3014711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3016043_3018148
transcript_35057.known	chr16	+	1678	3	FSM	ENSG00000006327.14	ENST00000571351.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	1459	junction_1	32.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	21	False	NA	23	True	AATAAA	-19	NA	3020389	3022383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3021320_3021554_3021690_3021770
transcript_35058.known	chr16	+	1300	14	FSM	ENSG00000131652.14	ENST00000574549.5	1300	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	306.571400604556	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTTCTATGAATGG	5	True	NA	69	True	AATAAA	-22	NA	3024040	3027755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3024087_3024192_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_35062.known	chr16	+	1360	13	FSM	ENSG00000131652.14	ENST00000575576.5	1360	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	237.503099394981	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAATAAAGTTTCAGG	18	True	NA	36	True	NA	NA	NA	3024053	3027722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_35067.known	chr16	+	1246	12	FSM	ENSG00000131652.14	ENST00000253952.9	1246	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	258.573710257566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTCTTTCTTTCTAT	28	True	NA	63	True	AATAAA	-16	NA	3024063	3027749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027576
transcript_35069.nnic	chr16	+	1334	12	NIC	ENSG00000131652.14	novel	1411	13	NA	NA	-26	0	intron_retention	FALSE	canonical	3	30	junction_10	248.55010968574	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTCTTTCTTTCTATG	727	False	NA	64	True	AATAAA	-17	NA	3024000	3027750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027365_3027501_3027576
transcript_3507.nic	chr1	+	2490	18	NIC	ENSG00000085999.13	novel	2549	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	87.2979624965862	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTGAGAGCAGTGT	0	True	NA	11	True	AATAAA	-14	NA	46247687	46278472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_46247747_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_3509.known	chr1	+	3078	18	FSM	ENSG00000085999.13	ENST00000371975.9	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_6	40.6263248386584	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	6	True	NA	12	True	AATAAA	-15	NA	46247762	46278473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_35096.known	chr16	-	495	5	FSM	ENSG00000103145.11	ENST00000573842.1	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	186.37244297374	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCAGTCCCCCCTACC	-15	True	NA	NA	False	NA	NA	NA	3024286	3022917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3023969_3024180
transcript_35098.known	chr16	-	610	4	FSM	ENSG00000103145.11	ENST00000572355.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	241.905399324245	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTCAGTCTGGAAC	37	True	NA	-31	True	AATAAA	-15	NA	3024234	3022628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3024180
transcript_35102.known	chr16	-	618	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	213.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	7	True	NA	-27	True	AATAAA	-19	NA	3023961	3022624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023846
transcript_35104.known	chr16	-	765	3	FSM	ENSG00000103145.11	ENST00000354679.3	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	273.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCCTTCTTCCCCAC	-2	True	NA	NA	False	NA	NA	NA	3024273	3022840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023413_3023846
transcript_35105.known	chr16	-	1199	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	2	True	NA	-27	True	AATAAA	-19	NA	3024269	3022624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023969_3024180
transcript_35106.known	chr16	-	656	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_3	103.82998924524	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	26	True	NA	-27	True	AATAAA	-19	NA	3023942	3022624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
transcript_35107.known	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	10	True	NA	-65	True	NA	NA	NA	3024261	3022662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3022999_3023232
transcript_35108.known	chr16	+	818	7	FSM	ENSG00000008517.19	ENST00000525643.7	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.52016505389306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGGGGAGATACCATG	3	True	NA	4	True	AATAAA	-17	NA	3065639	3069530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_35109.known	chr16	+	1105	7	FSM	ENSG00000008517.19	ENST00000325568.9	1105	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6.44635986860457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	5675	False	NA	NA	False	TATAAA	-19	NA	3065296	3069667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065495_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_35110.known	chr16	+	920	7	FSM	ENSG00000008517.19	ENST00000440815.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.42555646998182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGAGGTGGGTTTCCCA	25	False	NA	25	True	AATAAA	-38	NA	3065368	3069551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065495_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_35111.known	chr16	+	892	7	FSM	ENSG00000008517.19	ENST00000444393.7	892	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.09459888459759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGAGGTGGGTTTCCCA	163	False	NA	25	True	AATAAA	-38	NA	3065609	3069551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065711_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_35112.known	chr16	+	1056	6	FSM	ENSG00000008517.19	ENST00000008180.13	1056	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.10925397308532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGATGGAGTTTCGCT	-6	True	NA	NA	False	NA	NA	NA	3065630	3069819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_35113.known	chr16	+	1067	6	FSM	ENSG00000008517.19	ENST00000396890.6	1067	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.56417109729742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTATAAAGAAAAGAAGTT	2	True	NA	114	True	TATAAA	-20	NA	3065638	3069640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065688_3065783_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
transcript_35115.known	chr16	+	774	6	FSM	ENSG00000008517.19	ENST00000530890.5	774	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.23904756996088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCGCGGAGGTGGGTTTC	163	False	NA	22	True	AATAAA	-35	NA	3065609	3069548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065656_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_35116.known	chr16	+	623	6	FSM	ENSG00000008517.19	ENST00000552356.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.23904756996088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCTGTCCTGTGCCC	40	False	NA	NA	False	NA	NA	NA	3065676	3069409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3065711_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_35119.known	chr16	+	1968	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	19.3081732837562	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	8	True	NA	20	True	ATTAAA	-16	NA	3112585	3120517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_35121.known	chr16	+	2062	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.0587801693788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	-18	True	NA	20	True	ATTAAA	-16	NA	3112559	3120517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_35122.known	chr16	+	1006	7	FSM	ENSG00000122386.11	ENST00000414351.5	1006	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	23.2067997697993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGCCCAACGAGGAGG	217	False	NA	NA	False	NA	NA	NA	3112794	3119496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3112951_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_35123.known	chr16	+	2309	7	FSM	ENSG00000122386.11	ENST00000620094.4	2309	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.1551696790195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCCCGCCTACACAGCT	1	True	NA	18	True	ATTAAA	-14	NA	3112578	3120515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3112951_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_35129.known	chr16	-	1489	4	FSM	ENSG00000263072.9	ENST00000573447.2	1489	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	19.0262975904404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	-11	True	NA	-33	True	NA	NA	NA	3134873	3128861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3129654_3131746_3132104_3132849_3132946_3134629
transcript_35132.known	chr16	-	1592	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-20	True	NA	NA	False	NA	NA	NA	3134882	3128671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3129654_3131746_3132104_3134629
transcript_35133.known	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	50	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	8860	False	NA	-12	True	CATAAA	-17	NA	3134827	3131667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3132104_3134629
transcript_35134.known	chr16	+	302	3	FSM	ENSG00000263011.2	ENST00000570700.2	305	3	0	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATGCTCAGACTTCA	-3	True	NA	NA	False	AATAAA	-17	NA	3106763	3109576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3106831_3108248_3108332_3109424
transcript_35135.known	chr16	-	2373	5	FSM	ENSG00000010539.12	ENST00000396870.8	2373	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	20.7484939212464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTCTCATTTGT	-19	True	NA	-103	True	AATATA	-13	NA	3235186	3223335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_35136.known	chr16	-	1350	5	FSM	ENSG00000010539.12	ENST00000575948.1	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	19.2272592950738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGAACCCTTTCTGGG	-5	True	NA	NA	False	NA	NA	NA	3235070	3223891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_35137.known	chr16	-	3008	5	FSM	ENSG00000010539.12	ENST00000414144.7	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	17.5552698640608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	9	True	NA	-16	True	NA	NA	NA	3235158	3222324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_35139.known	chr16	-	3348	5	FSM	ENSG00000010539.12	ENST00000431561.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	19.3455421221531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATAGTTTTTGTTTCTTGC	0	True	NA	-36	True	NA	NA	NA	3235167	3222344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_35142.nic	chr16	-	1998	5	NIC	ENSG00000010539.12	novel	3082	5	NA	NA	7	105	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	24.7222066167242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTGTCTACTGTTCTT	-12	True	NA	2	True	GATAAA	-34	NA	3235179	3223230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3235111
transcript_35151.known	chr16	+	2859	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	21.7153299665364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3	True	NA	NA	False	AATAAA	-17	NA	3305496	3318851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_35152.known	chr16	+	2546	6	FSM	ENSG00000162086.16	ENST00000498240.6	2546	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	28.7569122125447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	NA	False	NA	16	True	AATAAA	-17	NA	3305405	3318574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_35153.known	chr16	+	598	5	FSM	ENSG00000162086.16	ENST00000571101.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	36.9687367920517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGCAGGCGTCATA	14	True	NA	NA	False	NA	NA	NA	3305507	3317252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_35155.nic	chr16	+	1319	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	72	9109	-6	-7	5prime_fragment	FALSE	canonical	3	72	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAACAAAAAAAAAA	-16	True	NA	NA	False	NA	NA	NA	3305477	3309465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_3305644_3308312
transcript_35156.nic	chr16	+	1620	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	72	8808	-6	294	5prime_fragment	FALSE	canonical	3	72	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAGATCCACAAGGAGAA	-16	True	NA	NA	False	NA	NA	NA	3305477	3309766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_3305644_3308312
transcript_35157.nic	chr16	+	1795	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	72	8633	-6	469	5prime_fragment	FALSE	canonical	3	72	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAAGCCAGGCTGATG	-16	True	NA	NA	False	NA	NA	NA	3305477	3309941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_3305644_3308312
transcript_35158.known	chr16	-	3421	2	FSM	ENSG00000140993.11	ENST00000396862.2	3421	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTGTTTCATAA	1	True	NA	1	True	TATAAA	-44	NA	3305430	3298807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3302010_3305211
transcript_35162.known	chr16	-	3108	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	10.3225750448013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-13	True	NA	-4	True	AATAAA	-17	NA	3401004	3382084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_35169.known	chr16	-	2441	4	FSM	ENSG00000140987.21	ENST00000576500.5	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	17.6320415405843	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAACAGAAAGAAG	-4	True	NA	NA	False	NA	NA	NA	3400995	3382357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3383712_3384458_3384942_3397191_3397745_3400944
transcript_35173.known	chr16	+	1068	4	FSM	ENSG00000103343.13	ENST00000575752.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	33.6286914537109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTCCTCCTCTGTG	10	True	NA	7	True	AATAAA	-19	NA	3401234	3405043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3404908
transcript_35174.known	chr16	+	1586	4	FSM	ENSG00000103343.13	ENST00000571936.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	34.4125300177453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTTGCATGTAAATCA	10	True	NA	NA	False	NA	NA	NA	3401234	3408973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3408320
transcript_35177.known	chr16	-	5483	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.35702260395516	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAACTTTTTAAAAA	-26	True	NA	NA	False	ATTAAA	-23	NA	3443504	3432413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
transcript_35180.known	chr16	+	4083	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	10.8025096563731	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	11	True	NA	NA	False	AATACA	-23	NA	3501003	3539048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
transcript_35190.known	chr16	+	2656	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	144.772164423403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	-9	True	NA	14	True	AATAAA	-16	NA	3443679	3486953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_35195.known	chr16	+	2531	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	121.4780501435	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3	True	NA	13	True	AATAAA	-15	NA	3458077	3486952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_35196.known	chr16	+	2619	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	137.7672150969	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	-22	True	NA	13	True	AATAAA	-15	NA	3458011	3486952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_35199.nic	chr16	+	720	7	ISM	ENSG00000103351.13	ENST00000341633.9	1643	13	-8	16580	0	-3217	5prime_fragment	FALSE	canonical	3	63	junction_6	12.7758452644912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATTAGAACTGGAAA	11	True	NA	NA	False	NA	NA	NA	3501003	3519979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902
transcript_352.nic	chr1	-	873	8	ISM	ENSG00000248333.9	ENST00000340677.9	2534	21	40	6648	0	-614	5prime_fragment	FALSE	canonical	3	22	junction_6	28.6056937389345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	15	True	NA	NA	False	NA	NA	NA	1658972	1642385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_35200.known	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	130.752590796512	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	11	True	NA	-25	True	NA	NA	NA	3458044	3486914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_35203.known	chr16	+	1045	6	FSM	ENSG00000122390.19	ENST00000421765.7	1045	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_4	141.396746780115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTGCCCTCACTGGGC	NA	False	NA	NA	False	NA	NA	NA	3457984	3485578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484690_3485084_3485466
transcript_35204.known	chr16	+	833	6	FSM	ENSG00000122390.19	ENST00000570819.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	121.682537777612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCGCTGCCTGTTCTTG	17	False	NA	NA	False	NA	NA	NA	3458129	3485604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485062_3485466
transcript_35205.known	chr16	+	1089	6	FSM	ENSG00000122390.19	ENST00000572942.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	138.281741383308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGTGGCCCCCACTC	3	True	NA	NA	False	NA	NA	NA	3458077	3485786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485084_3485466
transcript_35208.known	chr16	+	2522	6	FSM	ENSG00000122390.19	ENST00000360862.9	2522	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	147.199184780351	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	NA	False	NA	13	True	AATAAA	-15	NA	3457992	3486952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_3521.known	chr1	-	2842	10	FSM	ENSG00000132128.18	ENST00000615587.4	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_6	43.8983112248645	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGCCCTTCTTGATG	-1	True	NA	-26	True	AATAAA	-14	NA	46303263	46278402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46279085_46279181_46279258_46279491_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283_46298371_46303123
transcript_35211.known	chr16	+	3899	5	FSM	ENSG00000122390.19	ENST00000648681.1	3899	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	28.1813324738203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCACCCTGCCCCAC	-8	True	NA	-98	True	NA	NA	NA	3458104	3486841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362
transcript_35214.known	chr16	+	803	5	FSM	ENSG00000122390.19	ENST00000572739.5	803	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	157.87495051464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGTCCATCTGACCC	-4	True	NA	NA	False	NA	NA	NA	3458070	3484909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3483362_3483598_3484698
transcript_35218.known	chr16	+	326	3	FSM	ENSG00000122390.19	ENST00000615865.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	45	False	NA	NA	False	AATAAA	-17	NA	3443733	3450165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443828_3448470_3448541_3450003
transcript_35219.known	chr16	+	537	2	FSM	ENSG00000122390.19	ENST00000574762.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGGAAGCAGTATCAT	99	False	NA	NA	False	NA	NA	NA	3443787	3448967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_3443828_3448470
transcript_35225.known	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	4.29793231940921	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	17	True	NA	-5	True	AATAAA	-20	NA	4273023	4257185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
transcript_35229.known	chr16	-	595	4	FSM	ENSG00000090447.12	ENST00000574639.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.4276973520408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCGTGAAGCCTGTC	-26	True	NA	NA	False	NA	NA	NA	4272894	4258188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4272657
transcript_3523.nnic	chr1	-	645	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	305.210674052458	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	0	True	NA	3	True	AATAAA	-22	NA	46303277	46296741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_46297075_46297562_46297634_46298283_46298371_46303123
transcript_35232.known	chr16	-	3472	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	14.8448769065415	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGCTGCTGTGGTC	-12	True	NA	-4	True	ATTAAA	-18	NA	4416596	4354541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_3524.nnic	chr1	-	930	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	311.325481699709	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGGAGTCTGTGTAAC	0	True	NA	-2	True	AATAAA	-17	NA	46303277	46296746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_46297365_46297562_46297634_46298283_46298371_46303123
transcript_35248.nnic	chr16	-	725	6	NNC	ENSG00000217930.8	novel	674	6	NA	NA	-58	0	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_5	348.719027298483	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	NA	False	NA	-9	True	AATAAA	-14	NA	4351379	4340250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4343482_4343617_4351231
transcript_3525.known	chr1	+	2577	19	FSM	ENSG00000085999.13	ENST00000671528.1	2577	19	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	84.099973576426	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGTGTGGTAAGCC	12	False	NA	19	True	AATAAA	-22	NA	46247699	46278480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46247747_46248317_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_35254.known	chr16	-	533	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_4	142.967435103243	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-10	True	NA	-9	True	AATAAA	-14	NA	4351321	4340250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
transcript_35255.known	chr16	-	606	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	320.10193688886	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4	True	NA	-9	True	AATAAA	-14	NA	4351315	4340250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
transcript_35256.known	chr16	-	650	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	292.769000237389	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4	True	NA	-9	True	AATAAA	-14	NA	4351270	4340250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
transcript_35260.known	chr16	-	340	4	FSM	ENSG00000262686.1	ENST00000576080.1	340	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGCTGAATGAATCGTCG	NA	False	NA	NA	False	AATAAA	-1	NA	4328340	4324666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4324776_4325269_4325355_4326429_4326495_4328259
transcript_35261.known	chr16	-	353	4	FSM	ENSG00000217930.8	ENST00000571178.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	370.7086307181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGGCTCCCCCCGCCCA	18	True	NA	-76	True	AAAAAG	-22	NA	4351293	4340317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4351231
transcript_35264.known	chr16	-	806	2	FSM	ENSG00000217930.8	ENST00000575942.1	806	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGCACCGTGCCTG	-9	True	NA	NA	False	ATTAAA	-18	NA	4351320	4345289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4346007_4351231
transcript_35266.known	chr16	+	2700	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	152.864440567722	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	-2	True	NA	17	True	AAAAAG	-17	NA	4425867	4456775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
transcript_35269.nnic	chr16	+	2202	12	NNC	ENSG00000103423.14	novel	2700	12	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	143.856907784629	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAATTGTGGTCATTTCT	-16	True	NA	11	True	AAAAAG	-11	NA	4425853	4456769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545_4456154_4456542
transcript_35270.known	chr16	+	2591	11	FSM	ENSG00000103423.14	ENST00000355296.8	2591	11	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	62.4695926031217	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	-10	True	NA	17	True	AAAAAG	-17	NA	4425859	4456775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545
transcript_35273.known	chr16	+	403	3	FSM	ENSG00000103423.14	ENST00000573120.5	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	80	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAT	178	False	NA	NA	False	NA	NA	NA	4426047	4437625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4426093_4434383_4434518_4437401
transcript_35279.known	chr16	+	1797	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	212.998435049024	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCGCTGTGTAAATGCT	1617	False	NA	-39	True	NA	NA	NA	4476339	4510295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_35286.known	chr16	+	1727	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	189.877434151613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	22	False	NA	12	True	AATAAA	-17	NA	4474702	4510346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_35287.known	chr16	+	1673	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	53.4475443776419	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	-12	True	NA	13	True	AATAAA	-18	NA	4476397	4510347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_3529.known	chr1	+	537	4	FSM	ENSG00000173660.12	ENST00000311672.10	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	5242	junction_2	560.970785533634	7546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	12	True	NA	76	True	AATAAA	-19	NA	46303697	46316776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100_46309128_46310154_46310317_46316551
transcript_35292.known	chr16	-	1233	6	FSM	ENSG00000153406.14	ENST00000404295.7	1233	6	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_5	58.7142231490803	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-20	True	NA	-21	True	AATAAA	-16	NA	4474622	4461693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474409
transcript_35293.known	chr16	-	1240	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	174.487134196192	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTTCCAGGAGAAGA	-41	True	NA	-22	True	AATAAA	-15	NA	4474643	4461694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
transcript_35295.known	chr16	+	1027	5	FSM	ENSG00000103415.12	ENST00000575120.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	205.46456507145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGTGACTTTTTAAA	-4	True	NA	-52	True	ACTAAA	-6	NA	4476405	4509836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4476488_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_35299.nnic	chr16	-	1044	5	NIC	ENSG00000153406.14	novel	1233	6	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	199.664718966572	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-22	True	NA	-21	True	AATAAA	-16	NA	4474624	4461693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_4461960_4466152_4466403_4469226_4469466_4474092_4474167_4474409
transcript_3530.known	chr1	+	674	5	FSM	ENSG00000173660.12	ENST00000496387.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	2895.09579936485	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	23	True	NA	76	True	AATAAA	-19	NA	46303708	46316776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100_46309128_46309896_46310045_46310154_46310317_46316551
transcript_35304.known	chr16	-	1092	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	159.787859363595	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-23	True	NA	-21	True	AATAAA	-16	NA	4474625	4461693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
transcript_35307.known	chr16	-	1463	6	FSM	ENSG00000089486.17	ENST00000563507.5	1463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	310.441363223395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCGGAAGGAGCCCCTG	-4	True	NA	NA	False	NA	NA	NA	4538784	4511805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4512684_4512790_4512948_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_35308.known	chr16	-	2774	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_5	62.7330853696835	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATATGTGCTTTTTTA	9	True	NA	26	True	AATGAA	-10	NA	4538470	4510674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
transcript_35309.known	chr16	-	2706	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	233.490556554221	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTTTTTAAAACCC	7	True	NA	32	True	AATACA	-3	NA	4538773	4510668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_3531.known	chr1	+	687	2	FSM	ENSG00000173660.12	ENST00000486951.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	5331	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	21	True	NA	NA	False	NA	NA	NA	46303706	46309673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100
transcript_35316.known	chr16	+	1349	3	FSM	ENSG00000168101.14	ENST00000304301.10	1349	3	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_2	54.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCTGTGTGTTTGTTT	-3	True	NA	28	True	AATAAA	-32	NA	4693693	4695859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4693880_4693977_4694239_4694957
transcript_3532.known	chr1	+	553	4	FSM	ENSG00000173660.12	ENST00000489056.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2812.95325236663	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	12	True	NA	76	True	AATAAA	-19	NA	46303697	46316776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46303821_46309100_46309144_46310154_46310317_46316551
transcript_35322.known	chr16	-	834	2	FSM	ENSG00000168096.15	ENST00000590689.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATCCCTGGCCTTC	3772	False	NA	NA	False	AAAAAG	-7	NA	4734195	4729357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4730152_4734155
transcript_35324.known	chr16	-	1418	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	0	0	0	0	multi-exon	TRUE	canonical	3	392	junction_2	19.8343137012602	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	13	True	NA	-6	True	AATAAA	-16	NA	4802633	4796967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_35330.known	chr16	+	394	4	FSM	ENSG00000267795.6	ENST00000588606.5	394	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCTGCAGTGTCTT	12	False	NA	NA	False	NA	NA	NA	4795377	4796281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_4795450_4795714_4795859_4795947_4796034_4796189
transcript_35331.nic	chr16	-	3345	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_7	212.012298803041	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-18	True	NA	-7	True	AATAAA	-19	NA	4847306	4803202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35332.nic	chr16	-	3363	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_1	162.235349396332	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-18	True	NA	-7	True	AATAAA	-19	NA	4847306	4803202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35334.known	chr16	-	1831	16	FSM	ENSG00000140632.17	ENST00000591451.5	1831	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	170.477238624072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGTCAGCAGGATTGG	23	True	NA	NA	False	NA	NA	NA	4847265	4805048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35335.known	chr16	-	3718	16	FSM	ENSG00000140632.17	ENST00000321919.14	3718	16	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_6	86.086777923984	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	0	True	NA	-7	True	AATAAA	-19	NA	4847288	4803202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35337.nic	chr16	-	3667	15	NIC	ENSG00000140632.17	novel	3718	16	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_8	245.078038383612	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-18	True	NA	-7	True	AATAAA	-19	NA	4847306	4803202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35338.nic	chr16	-	3685	15	NIC	ENSG00000140632.17	novel	3718	16	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_8	197.602931069726	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-18	True	NA	-7	True	AATAAA	-19	NA	4847306	4803202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35342.nic	chr16	-	1023	9	ISM	ENSG00000140632.17	ENST00000591451.5	1831	16	-41	16155	-18	0	5prime_fragment	FALSE	canonical	3	694	junction_1	65.8662233242502	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGTCGGGTCTCCCTT	-18	True	NA	3	True	GATAAA	-25	NA	4847306	4821203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35346.nic	chr16	-	2331	5	ISM	ENSG00000140632.17	ENST00000591451.5	1831	16	-41	25177	-18	2229	5prime_fragment	FALSE	canonical	3	788	junction_4	34.0477605724664	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAAAGTTGGCCAGG	-18	True	NA	NA	False	NA	NA	NA	4847306	4830225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_35348.nic	chr16	-	901	3	ISM	ENSG00000140632.17	ENST00000587875.1	630	4	-24	11914	-18	-11504	5prime_fragment	FALSE	canonical	3	788	junction_2	47	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTCATGTGTAAAACTA	-18	True	NA	NA	False	AATAAA	-17	NA	4847306	4844368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_4845154_4846173_4846211_4847227
transcript_35349.known	chr16	-	1091	1	FSM	ENSG00000275056.1	ENST00000614098.1	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCGGCTTGTTCTCAC	6954	False	NA	-1	True	AATAAA	-14	NA	4840334	4839243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_4839200_4840300
transcript_35350.known	chr16	+	2671	14	FSM	ENSG00000033011.14	ENST00000588623.5	2671	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	113.258619066716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTTCATGTCTGATTT	0	True	NA	21	True	AAGAAA	-18	NA	5033959	5085390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5034062_5042094_5042968_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_35355.known	chr16	+	3900	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_12	21.5450110234365	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	9	True	NA	11	True	GATAAA	-18	NA	5071842	5087379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_35360.known	chr16	+	2668	12	FSM	ENSG00000033011.14	ENST00000682985.1	2668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	122.232538173883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	332	False	NA	-28	True	NA	NA	NA	5033922	5085532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5034062_5042094_5042968_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_35361.known	chr16	+	1952	12	FSM	ENSG00000033011.14	ENST00000684335.1	1952	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	90.0556301900421	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGGAAATTAACATTC	NA	False	NA	-55	True	NA	NA	NA	5071805	5085505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5082558_5082674_5083681_5083758_5084749
transcript_35362.known	chr16	+	2051	12	FSM	ENSG00000033011.14	ENST00000684190.1	2051	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	91.3930753114044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	NA	False	NA	-28	True	NA	NA	NA	5071805	5085532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_35365.nic	chr16	-	1384	9	NIC	ENSG00000118894.15	novel	1282	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_8	107.807046963545	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	7	False	NA	NA	False	NA	NA	NA	5097787	5085362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279_5097354_5097643
transcript_35368.known	chr16	-	2397	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	60.4243497343275	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-1	True	NA	NA	False	AATAAA	-37	NA	5097795	5084283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
transcript_3537.known	chr1	+	4347	6	FSM	ENSG00000117481.11	ENST00000474844.6	4347	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	8.08455317256309	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	4	True	NA	12	True	AATAAA	-14	NA	46340806	46365018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46340920_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
transcript_35372.known	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	131.445185285327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	28	False	NA	NA	False	NA	NA	NA	5097766	5085362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
transcript_35378.known	chr16	-	2268	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	93.5546483196972	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	6	False	NA	NA	False	AATAAA	-17	NA	5097788	5084303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
transcript_35381.nic	chr16	-	1243	7	NIC	ENSG00000118894.15	novel	1282	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	117.003442494465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	NA	False	NA	NA	False	NA	NA	NA	5097801	5085362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097643
transcript_35389.known	chr16	-	873	6	FSM	ENSG00000118894.15	ENST00000587133.1	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	135.326272393796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGGAAAGCGGATAAA	52	False	NA	NA	False	NA	NA	NA	5097742	5085571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5095451_5095515_5097643
transcript_3539.known	chr1	+	4344	5	FSM	ENSG00000117481.11	ENST00000307089.7	4344	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	22.3886131772381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGTGAGTATTAATG	-14	True	NA	NA	False	NA	NA	NA	46340788	46365152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46340920_46344800_46345145_46352867_46353029_46360703_46360829_46361569
transcript_35392.nic	chr16	-	908	5	ISM	ENSG00000153446.16	ENST00000472572.8	1360	8	7241	0	-95	0	3prime_fragment	FALSE	canonical	3	17	junction_2	4.26468052730799	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	7315	False	NA	-1	True	AATAAA	-17	NA	5058715	5044121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492
transcript_35395.known	chr16	+	2265	2	FSM	ENSG00000033011.14	ENST00000632058.1	2265	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	111	False	NA	NA	False	NA	NA	NA	5033701	5043999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5034062_5042094
transcript_35396.known	chr16	+	1580	3	FSM	ENSG00000078328.23	ENST00000585867.2	1580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGTTGTCAG	NA	False	NA	NA	False	AATACA	-18	NA	5239814	5600151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_5240106_5467215_5467255_5598901
transcript_35402.known	chr16	+	4974	11	FSM	ENSG00000067365.15	ENST00000381920.8	4974	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	34.0189652987859	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGG	0	True	NA	NA	False	AATACA	-17	NA	8621697	8649654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_35405.nnic	chr16	+	1420	10	NNC	ENSG00000067365.15	novel	1510	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	58.8840668885339	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	-8	True	NA	17	True	AGTAAA	-18	NA	8621689	8646218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_8621776_8625495_8625799_8628729_8629026_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_35406.nnic	chr16	+	1377	10	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	24	junction_9	59.845067455601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	-8	True	NA	17	True	AGTAAA	-18	NA	8621689	8646218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_35408.known	chr16	+	1510	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	45.8693797647189	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	-7	True	NA	23	True	AGTAAA	-24	NA	8621690	8646224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_3541.nic	chr1	+	1546	2	ISM	ENSG00000117481.11	ENST00000474844.6	4347	6	-67	18852	-49	792	5prime_fragment	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATCTACCAAATGCT	-5	True	NA	NA	False	NA	NA	NA	46340739	46346166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_46340920_46344800
transcript_35411.nnic	chr16	+	1319	9	NIC	ENSG00000067365.15	novel	1510	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	24	junction_8	69.9820289431508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	9	True	NA	17	True	AGTAAA	-18	NA	8621706	8646218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_35416.nnic	chr16	+	1327	2	NIC	ENSG00000183044.12	novel	1870	2	NA	NA	-27	140	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATAGTATTTTATTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	8674568	8715773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_8674712_8714589
transcript_35417.known	chr16	+	4779	16	FSM	ENSG00000183044.12	ENST00000268251.13	4779	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	3.80992854992788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGAATGTGGACTTT	0	True	NA	9	True	AATAAA	-15	NA	8674616	8784570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8674712_8735698_8735810_8746000_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8764068_8764150_8764737_8764831_8766207_8766271_8768192_8768257_8768824_8768974_8772779_8772918_8774889_8775058_8776343_8776491_8779478_8779591_8781308
transcript_35420.known	chr16	+	2285	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	38.2425129393763	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCATTCCGATT	-7	True	NA	25	True	ATTAAA	-15	NA	8797838	8849325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_35422.known	chr16	+	986	7	FSM	ENSG00000140650.13	ENST00000566604.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	128.223329477214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCCCCATCATTCTAG	-9	True	NA	NA	False	NA	NA	NA	8797836	8848124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_35423.known	chr16	+	931	7	FSM	ENSG00000140650.13	ENST00000562318.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	127.195387757051	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCCACCCACCCCC	-4	True	NA	NA	False	NA	NA	NA	8797841	8848051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_35424.known	chr16	+	1557	6	FSM	ENSG00000140650.13	ENST00000566540.5	1557	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	174.859257690292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCTATCTGCACTCAC	-4	True	NA	NA	False	NA	NA	NA	8797841	8848777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_35425.known	chr16	+	793	6	FSM	ENSG00000140650.13	ENST00000565221.5	793	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	135.529480187891	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAATGCCTCGCACAAA	21	True	NA	NA	False	NA	NA	NA	8797866	8848030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_35426.known	chr16	+	698	5	FSM	ENSG00000140650.13	ENST00000569958.5	698	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.989582992094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGCACAAAAGGTCTTCC	21	True	NA	NA	False	NA	NA	NA	8797866	8848039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_8797949_8801798_8801911_8811641_8811714_8812990_8813107_8847723
transcript_35429.known	chr16	-	556	5	FSM	ENSG00000153048.11	ENST00000565287.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	1351.04163518376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGGCACCAAGCATGAG	2	True	NA	NA	False	NA	NA	NA	8869006	8855213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8860104_8860219_8868965
transcript_35433.known	chr16	-	565	4	FSM	ENSG00000153048.11	ENST00000567908.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1298.03090187492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATCACTCACCTGGCAC	1293	False	NA	NA	False	NA	NA	NA	8867887	8855230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8867706
transcript_35434.known	chr16	-	3026	4	FSM	ENSG00000153048.11	ENST00000396593.6	3026	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	1290.52159997421	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	779	False	NA	-27	True	AATAAA	-22	NA	8868401	8852941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048
transcript_35435.known	chr16	-	2709	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1731	junction_3	494.741908024331	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATGCGTGTGTTTGTGT	2	True	NA	-32	True	AATAAA	-17	NA	8869006	8852946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
transcript_3544.nnic	chr1	+	1996	16	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_5	125.07004259836	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393762	46413845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46405870_46405953_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_35448.known	chr16	-	1439	2	FSM	ENSG00000184857.8	ENST00000333050.7	1439	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTACGTTATTTTATA	1	True	NA	1	True	AATAAA	-16	NA	8797639	8795179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8796591_8797611
transcript_35449.known	chr16	-	1913	2	FSM	ENSG00000153048.11	ENST00000563815.5	1913	2	0	0	0	0	multi-exon	FALSE	canonical	3	1731	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCG	2	True	NA	NA	False	AATACA	-10	NA	8869006	8857463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_8859336_8868965
transcript_35453.known	chr16	+	5952	4	FSM	ENSG00000182831.12	ENST00000327827.12	5952	4	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_3	10.8730042868667	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTGACTTGTGTTCCT	17	True	NA	NA	False	AATAAA	-36	NA	9091643	9121635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_9092271_9092920_9093002_9102983_9103260_9116667
transcript_35465.nnic	chr16	-	1055	4	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.7161665492222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676917	9666884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667391_9668890_9669099_9674300_9674398_9676673
transcript_35472.nnic	chr16	-	816	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	29	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676917	9666884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667360_9674300_9674398_9676673
transcript_35473.nnic	chr16	-	873	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	58.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676917	9666884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667360_9674300_9674455_9676673
transcript_35474.nnic	chr16	-	1169	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	59	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676921	9666884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667360_9674300_9674747_9676673
transcript_35478.nnic	chr16	-	847	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676917	9666884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667391_9674300_9674398_9676673
transcript_35479.nnic	chr16	-	1200	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676921	9666884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_9667391_9674300_9674747_9676673
transcript_35482.nnic	chr16	+	1344	2	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGACTGTGTTTCTTGAT	NA	False	NA	14	True	AATAAA	-32	NA	9673940	9717553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_+_9674462_9716730
transcript_35484.nnic	chr16	+	1070	2	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTGTCCCTCAGGTTT	NA	False	NA	8	True	AATAAA	-26	NA	9674321	9717660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_+_9674462_9716730
transcript_35486.known	chr16	-	660	2	FSM	ENSG00000260362.1	ENST00000561538.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676843	9666884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_9667375_9676673
transcript_35492.known	chr16	+	3665	12	FSM	ENSG00000166669.14	ENST00000396560.6	3665	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.7956220082705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTATGTCTTTATTTT	-4	True	NA	11	True	AATAAA	-17	NA	10386054	10483638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10457371_10457530_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
transcript_35493.known	chr16	+	1907	10	FSM	ENSG00000166669.14	ENST00000535850.5	1907	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	17.8885438199983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTACTTTATCTCAGTTT	2	True	NA	NA	False	ATTAAA	-20	NA	10386060	10482118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10473478_10473535_10473922_10473990_10480878_10480965_10481835
transcript_35494.known	chr16	+	576	3	FSM	ENSG00000166669.14	ENST00000566316.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	9.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	-1	True	NA	11	True	AATAAA	-21	NA	10386057	10387741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10386123_10387143_10387291_10387377
transcript_35495.nic	chr16	+	692	2	ISM	ENSG00000166669.14	ENST00000566316.5	576	3	-35	6	-32	-2	intron_retention	FALSE	canonical	3	82	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCAAGAGTATTAGTTCTC	-2	True	NA	5	True	AATAAA	-15	NA	10386022	10387735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_10386123_10387143
transcript_35496.known	chr16	+	1681	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	2	True	NA	11	True	AATAAA	-21	NA	10386060	10387741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10386100_10387700
transcript_35499.known	chr16	-	5097	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	9.86154146165801	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCCCTCTGCTTCTTT	-7	True	NA	NA	False	GATAAA	-20	NA	10580598	10528421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
transcript_35500.known	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	35.5681036885578	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	6	True	NA	23	True	AATAAA	-16	NA	10743841	10769351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_35501.nic	chr16	+	1191	10	NIC	ENSG00000103274.11	novel	1231	11	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_9	77.5324702986902	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	NA	False	NA	23	True	AATAAA	-16	NA	10743797	10769351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10769046
transcript_35505.known	chr16	+	1185	10	FSM	ENSG00000103274.11	ENST00000433392.6	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	84.6138651335554	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	19	True	NA	23	True	AATAAA	-16	NA	10743854	10769351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_3551.nnic	chr1	+	1914	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_1	92.9575281556923	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393762	46413845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_3552.nnic	chr1	+	1866	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_13	117.918512160746	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393762	46413845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413122_46413221_46413446
transcript_35520.known	chr16	+	1137	10	FSM	ENSG00000103274.11	ENST00000571790.5	1137	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	88.7606018706748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCATCACGGCCCATA	5	True	NA	NA	False	NA	NA	NA	10743840	10763834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10763540
transcript_35521.nic	chr16	+	2132	10	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-17	122801	0	-20933	5prime_fragment	FALSE	canonical	3	43	junction_7	10.6249183003395	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTTAGTATTTTTAA	-27	True	NA	NA	False	NA	NA	NA	10944563	11003986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073
transcript_35523.known	chr16	+	818	2	FSM	ENSG00000175643.10	ENST00000576027.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACTCAAACATTTAGAC	-1	True	NA	NA	False	NA	NA	NA	11345449	11351365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11345544_11350641
transcript_35524.known	chr16	+	1427	2	FSM	ENSG00000175643.10	ENST00000312499.6	1427	2	0	0	0	0	multi-exon	FALSE	canonical	3	1703	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTTTTTTTTTA	8	True	NA	13	True	AATAAA	-13	NA	11345458	11351760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11345767_11350641
transcript_35525.known	chr16	-	680	2	FSM	ENSG00000122304.11	ENST00000241808.9	680	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGTCGGGTTT	-1	True	NA	NA	False	AATAAA	-14	NA	11276480	11275638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11275938_11276099
transcript_35530.known	chr16	-	2292	5	FSM	ENSG00000189067.14	ENST00000413364.6	2292	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	462.719407416633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATGAGTTCTTTT	-4	True	NA	-51	True	AATAAA	-20	NA	11586950	11547998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11551706_11551805_11553532_11553690_11556510_11556736_11586885
transcript_35533.known	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_3	242.910591690761	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	2	True	NA	-12	True	AATAAA	-16	NA	11586919	11547721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
transcript_35534.known	chr16	-	1118	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	417.923703829087	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGACTTCATTAGCACA	220	False	NA	NA	False	NA	NA	NA	11587247	11549106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
transcript_35535.known	chr16	-	2632	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	536.755893203688	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	11587563	11547721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
transcript_35537.known	chr16	-	2356	4	FSM	ENSG00000189067.14	ENST00000339430.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	558.722550904193	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATTTATGAGTTCTTT	1094	False	NA	-52	True	AATAAA	-19	NA	11586373	11547999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586145
transcript_35550.known	chr16	+	3264	2	FSM	ENSG00000184602.6	ENST00000329565.6	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	3	True	NA	21	True	AATAAA	-33	NA	11668454	11679152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11668541_11675974
transcript_35552.known	chr16	+	808	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGAGGTCTCATTTATA	-40	True	NA	NA	False	NA	NA	NA	11797467	11798275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11797500_11798300
transcript_35557.known	chr16	-	1323	9	FSM	ENSG00000171490.13	ENST00000355674.9	1323	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	746.968529708582	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAATCAAAGAAGAGGCA	-7	True	NA	-11	True	NA	NA	NA	11851544	11837965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11838114_11839694_11839986_11841694_11841818_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_35560.known	chr16	-	1470	8	FSM	ENSG00000171490.13	ENST00000396503.7	1470	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	792.658610922374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTTTGTAACCTTCTC	-4	True	NA	NA	False	NA	NA	NA	11851580	11837717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11851407
transcript_35561.nic	chr16	-	985	8	ISM	ENSG00000171490.13	ENST00000571133.6	5440	9	-56	6092	-18	-93	5prime_fragment	FALSE	canonical	3	1873	junction_1	231.025928397305	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGGAAGAAGAAGAGGC	NA	False	NA	NA	False	AAGAAA	-16	NA	11851598	11839941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_35563.known	chr16	-	871	7	FSM	ENSG00000171490.13	ENST00000570767.5	871	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	877.622055455663	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAGAAAAAAGTTAGTA	-5	True	NA	13	True	NA	NA	NA	11851542	11841707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850414_11851403
transcript_35564.known	chr16	-	710	5	FSM	ENSG00000171490.13	ENST00000573618.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	896.570131110779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGCAGTGAAGGAAAA	19	True	NA	0	True	NA	NA	NA	11851518	11837954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11841930_11851407
transcript_35566.known	chr16	-	1603	15	FSM	ENSG00000103342.13	ENST00000420576.6	1603	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	500.510091847124	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTCTTGATGACCCTG	600	False	NA	NA	False	NA	NA	NA	11916082	11873118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11916041
transcript_35568.nic	chr16	+	1844	14	NIC	ENSG00000048471.14	novel	8173	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	4.43092948428144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTGGTGGTTTTTC	6	True	NA	NA	False	AATAAA	-18	NA	11976744	12135737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846_12052223_12061527_12061647_12069056_12069133_12078832_12078916_12126632_12126697_12129629_12129759_12135550
transcript_35569.known	chr16	+	8173	21	FSM	ENSG00000048471.14	ENST00000566228.6	8173	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	4.73787927241714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTCTGTCTCAGTTC	-5	True	NA	16	True	TATAAA	-16	NA	11976733	12574287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846_12052223_12061527_12061647_12069056_12069133_12078832_12078916_12126632_12126697_12129629_12129759_12199600_12199684_12277932_12278037_12356162_12356280_12398445_12398502_12403447_12403530_12477718_12477860_12524701_12524842_12568505
transcript_35570.known	chr16	-	1993	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTCTTCTTTTAGTGT	-12	True	NA	-1	True	ATTAAA	-16	NA	12803851	12663486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_12665116_12781184_12781404_12803706
transcript_35571.known	chr16	-	6143	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	18.6607133363712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-48	True	NA	1	True	ATTAAA	-21	NA	12803887	12659798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
transcript_35572.known	chr16	+	324	1	FSM	ENSG00000241932.1	ENST00000468671.1	324	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACTAATGAAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	12881169	12881493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_12881200_12881500
transcript_35576.known	chr16	+	2803	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	6.20730313782869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTTCTCTGTTTA	-12	True	NA	NA	False	NA	NA	NA	13920157	13936727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
transcript_35580.known	chr16	+	2073	6	FSM	ENSG00000175595.16	ENST00000575156.5	2073	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	5.57135531087365	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAATATCCTTTTTAA	-13	True	NA	NA	False	AATAAA	-17	NA	13920156	13933247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156
transcript_35581.known	chr16	+	604	3	FSM	ENSG00000175595.16	ENST00000576348.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTGAGATCTACTG	21	True	NA	NA	False	NA	NA	NA	13920190	13926801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_13920373_13922030_13922212_13926560
transcript_35589.known	chr16	-	3071	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	77.9885358256381	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	3810	False	14630279	-1	True	ATTAAA	-16	NA	14630260	14435700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_35593.nic	chr16	-	1605	19	NIC	ENSG00000140694.17	novel	1988	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	115.459896303093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGGACTTGTAGTTT	3807	False	14630279	NA	False	AATAAA	-38	NA	14630263	14576071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_14576277_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_35594.nic	chr16	-	1606	18	ISM	ENSG00000140694.17	ENST00000651027.1	1740	22	-16	29060	-3	-4596	5prime_fragment	FALSE	canonical	0	0	junction_15	88.8334626311785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACATTGCTAGACGTAG	3807	False	14630279	NA	False	ATTAAA	-24	NA	14630263	14580667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_356.nic	chr1	-	1138	7	ISM	ENSG00000248333.9	ENST00000407249.7	2677	20	-272	6799	-272	-614	5prime_fragment	FALSE	canonical	3	78	junction_3	9.51606828241347	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	NA	False	NA	NA	False	NA	NA	NA	1659284	1642385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_35601.known	chr16	+	2903	8	FSM	ENSG00000103429.11	ENST00000261658.7	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	56.9346205784158	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAGAGAAAAAGCAATT	16	True	NA	NA	False	AATAAA	-30	NA	14632950	14669236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803_14649974_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_35617.known	chr16	+	1662	6	FSM	ENSG00000103429.11	ENST00000563971.5	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	94.7641282342638	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTGTCTTATTGAAG	-4	True	NA	23	True	CATAAA	-31	NA	14632930	14668350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_35625.known	chr16	+	1414	4	FSM	ENSG00000103429.11	ENST00000562442.5	1414	4	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_3	13.0213499897497	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTATTTTGTGTCTG	-3	True	NA	15	True	TATAAA	-14	NA	14632931	14650589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803
transcript_35627.known	chr16	+	706	4	FSM	ENSG00000103429.11	ENST00000563313.5	706	4	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_2	117.502718644672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTGGAATTATTCTCC	-2	True	NA	NA	False	NA	NA	NA	14632973	14665019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14661891_14662066_14664868
transcript_35628.known	chr16	+	1177	3	FSM	ENSG00000103429.11	ENST00000566520.5	1177	3	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	137	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGACGTTTGATATAAA	-4	True	NA	-18	True	NA	NA	NA	14632930	14650556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14633019_14644273_14644610_14649803
transcript_35631.known	chr16	-	636	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694308	14672547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
transcript_35634.nnic	chr16	+	1525	8	NNC	ENSG00000254852.8	novel	954	7	NA	NA	382	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	76.2166621667253	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	14751194	14765413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_14751730_14755191_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
transcript_35635.known	chr16	-	706	2	FSM	ENSG00000255277.3	ENST00000542005.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGAGCCTTTCTGCTC	NA	False	NA	-24	True	AATAAA	-13	NA	14824702	14822431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_14823069_14824633
transcript_35639.known	chr16	+	4598	23	FSM	ENSG00000179889.20	ENST00000396410.9	4598	23	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_18	97.9217620736234	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCCTGAATTAGTAAGA	17	True	NA	NA	False	AATAAA	-17	NA	14975025	15038332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_35640.known	chr16	+	2683	22	FSM	ENSG00000179889.20	ENST00000627450.2	2683	22	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	176.994612829096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCCCGTGGCAACTTTT	12	True	NA	NA	False	NA	NA	NA	14975128	15036604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14975221_14997752_14997827_14998342_14998406_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_35642.nic	chr16	+	2461	17	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-48	5034	-23	0	5prime_fragment	FALSE	canonical	3	502	junction_16	78.7747728892315	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	48	False	NA	NA	False	NA	NA	NA	14975056	15032653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734
transcript_35643.known	chr16	+	2048	17	FSM	ENSG00000179889.20	ENST00000535621.6	2048	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_16	157.912740441517	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGACCTAACTCCATCTAA	3	True	NA	NA	False	AATAAA	-41	NA	14975011	15139339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15138878
transcript_35646.nnic	chr16	+	2247	17	NNC	ENSG00000179889.20	novel	2048	17	NA	NA	-23	22229	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	171.049232222042	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTGCCTGGGAGATTT	48	False	NA	NA	False	AATAAA	-25	NA	14975056	15161568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15160863
transcript_35647.nnic	chr16	+	2459	17	NNC	ENSG00000179889.20	novel	2048	17	NA	NA	-23	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	172.375124637373	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAATAAAATTAGAAAAC	48	False	NA	NA	False	AATACA	-17	NA	14975056	15139381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030410_15138817
transcript_3565.nnic	chr1	+	1790	14	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-544	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	111.681817689214	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393772	46413845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_46393862_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_35658.nic	chr16	+	1335	13	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-48	14881	-23	5419	5prime_fragment	FALSE	canonical	3	555	junction_4	73.8682667546311	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTTGAATGATTTTAG	48	False	NA	8	True	AATATA	-18	NA	14975056	15022806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703
transcript_35660.nic	chr16	+	1911	13	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-48	14305	-23	5995	5prime_fragment	FALSE	canonical	3	555	junction_4	73.8682667546311	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTCATTGAGTGTTTCT	48	False	NA	5	True	AATATA	-20	NA	14975056	15023382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703
transcript_35662.known	chr16	+	884	9	FSM	ENSG00000179889.20	ENST00000562119.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	231.022590886692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGGCCTTCCAGAAAGG	15	False	NA	NA	False	GGGGCT	-25	NA	14975088	15036197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001789_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_35667.nnic	chr16	-	1333	11	NNC	ENSG00000157045.9	novel	1210	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	357.795877561495	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	-5	True	NA	-4	True	AATAAA	-17	NA	15055803	15037856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15046356_15046515_15047441_15047551_15047854_15047921_15047996_15048100_15055654
transcript_35672.known	chr16	-	1210	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_9	106.15397621694	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	0	True	NA	-4	True	AATAAA	-17	NA	15056074	15037856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
transcript_35673.known	chr16	-	1043	9	FSM	ENSG00000157045.9	ENST00000565187.5	1043	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	231.834497810399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTATTTTGGCAAAGGC	-14	True	NA	-21	True	NA	NA	NA	15056027	15037873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
transcript_35676.known	chr16	-	1049	8	FSM	ENSG00000157045.9	ENST00000622833.4	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	252.971967471755	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	-5	True	NA	-1	True	AATAAA	-20	NA	15056079	15037853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15055890
transcript_35678.known	chr16	-	3706	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_6	20.9454721304669	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTCAATTTCTGTTT	NA	False	NA	-24	True	AATAAA	-16	NA	15094272	15060032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_35680.known	chr16	-	2198	17	FSM	ENSG00000085721.13	ENST00000429751.6	2198	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	44.2236856786044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAATATAGGCAGCA	7	False	NA	NA	False	NA	NA	NA	15094249	15061427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15091314_15091372_15092508_15092615_15094144
transcript_35688.known	chr16	-	2128	19	FSM	ENSG00000085721.13	ENST00000563559.5	2128	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	53.5880779536403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTTTCAATTTCTGT	NA	False	NA	-26	True	AATAAA	-14	NA	15094311	15060034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15060174_15061788_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_35690.nnic	chr16	-	1524	8	NNC	ENSG00000183793.14	novel	1084	8	NA	NA	414	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	119.262016465548	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	450	False	NA	NA	False	AATAAA	-21	NA	15377880	15363627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15377377
transcript_35692.known	chr16	+	2111	6	FSM	ENSG00000166780.11	ENST00000300006.9	2111	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	27.1366910289372	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	-2	True	NA	11	True	ATTAAA	-37	NA	15434587	15588259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15586716
transcript_35696.nic	chr16	+	1031	5	ISM	ENSG00000166780.11	ENST00000300006.9	2111	6	-108	4666	5	355	5prime_fragment	FALSE	canonical	3	161	junction_3	24.9035640019657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGCCATTTCAGAGAA	-23	True	NA	NA	False	NA	NA	NA	15434479	15583593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155
transcript_35698.known	chr16	+	546	4	FSM	ENSG00000166780.11	ENST00000567550.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	16.5730705262081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCATCTTCTGCTCCT	-2	True	NA	NA	False	NA	NA	NA	15434587	15581392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216
transcript_357.nnic	chr1	-	795	7	NNC	ENSG00000248333.9	novel	2992	20	NA	NA	1	-614	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	31.939613161228	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	16	True	NA	NA	False	NA	NA	NA	1658971	1642385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_1642509_1645125_1645263_1649498_1649638_1652468_1652567_1655368_1655485_1657374_1657499_1658913
transcript_35700.known	chr16	+	1854	5	FSM	ENSG00000166780.11	ENST00000566490.5	1854	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	80.5306618624236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTACTTTTTTTCTTGA	NA	False	NA	19	True	AATAAA	-31	NA	15434474	15587972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15586716
transcript_35701.nic	chr16	+	1408	2	ISM	ENSG00000261130.5	ENST00000568222.5	652	3	38530	-1099	38530	1084	3prime_fragment	FALSE	canonical	3	201	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATACAAAAAATATA	-23	True	NA	NA	False	AAGAAA	-5	NA	15434479	15516432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_15434760_15515304
transcript_35702.nnic	chr16	+	2943	10	NNC	ENSG00000072864.16	novel	5861	10	NA	NA	5	1420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	23.0988215187606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGAACTTGTTGGGC	-16	True	NA	23	True	AATAAA	-13	NA	15650232	15701911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699596_15700631_15701054
transcript_35703.nnic	chr16	+	2811	10	NNC	ENSG00000072864.16	novel	5861	10	NA	NA	5	1420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.0146142626022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGAACTTGTTGGGC	-16	True	NA	23	True	AATAAA	-13	NA	15650232	15701911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699728_15700631_15701054
transcript_35704.known	chr16	+	3203	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	7.07106781186548	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	-4	True	NA	18	True	AATAAA	-20	NA	15650244	15726353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
transcript_35707.nic	chr16	+	1880	8	ISM	ENSG00000072864.16	ENST00000674538.1	3241	10	5	8039	5	879	5prime_fragment	FALSE	canonical	2	7	junction_7	18.0056680418321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGTGGCTTGAAGG	-16	True	NA	NA	False	GATAAA	-34	NA	15650232	15725170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15724190
transcript_35708.known	chr16	-	646	6	FSM	ENSG00000133393.13	ENST00000573429.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	281.536924754108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTAAAATTGTATTAT	-14	True	NA	NA	False	NA	NA	NA	15888614	15867419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883021_15884007_15884206_15888557
transcript_35709.known	chr16	-	2264	5	FSM	ENSG00000133393.13	ENST00000255759.11	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_3	34.2928563989645	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCAAAGGGTGTTC	-3	True	NA	-11	True	AATAAA	-17	NA	15888603	15865718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15884007_15884206_15888557
transcript_35712.known	chr16	-	565	4	FSM	ENSG00000133393.13	ENST00000575744.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	275.778091144956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTGAGATGGA	-3	True	NA	48	True	AAAAAG	-21	NA	15888603	15867219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15888557
transcript_35713.known	chr16	-	851	4	FSM	ENSG00000133393.13	ENST00000573087.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	274.153647107279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGAGTAGTTTTTGTATT	9277	False	NA	NA	False	AAAACA	-16	NA	15888625	15867068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15873490_15873628_15884007_15884206_15888557
transcript_35714.known	chr16	-	530	4	FSM	ENSG00000133393.13	ENST00000575073.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	247.958777936083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTTTCTACAAAACAC	9277	False	NA	-70	True	NA	NA	NA	15888625	15867337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_15867517_15879803_15879889_15884007_15884206_15888557
transcript_35717.known	chr16	-	714	2	FSM	ENSG00000091262.17	ENST00000575728.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	26	False	NA	NA	False	AATAAA	-21	NA	16223467	16221186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_16221832_16223398
transcript_35719.known	chr16	+	2943	11	FSM	ENSG00000256340.9	ENST00000546162.6	2943	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.2865780427261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTTGTTGAAGAAAATAA	NA	False	NA	40	True	AATAAA	-15	NA	18571187	18598328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_18571312_18572876_18573061_18574319_18574436_18574760_18574887_18575025_18575155_18580209_18580336_18582405_18582468_18585805_18585938_18591103_18591308_18592538_18592717_18596766
transcript_35720.nic	chr16	+	2804	10	FSM	ENSG00000256340.9	ENST00000565647.6	1534	10	-5	-1265	-5	0	multi-exon	FALSE	canonical	2	4	junction_2	12.3388376105793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTTGTTGAAGAAAATAA	-6	True	NA	40	True	AATAAA	-15	NA	18571210	18598328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_18571312_18572876_18573061_18574760_18574887_18575025_18575155_18580209_18580336_18582405_18582468_18585805_18585938_18591103_18591308_18592538_18592717_18596766
transcript_35722.known	chr16	+	796	2	FSM	ENSG00000256340.9	ENST00000565118.2	813	2	0	17	0	-17	multi-exon	FALSE	canonical	3	47	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	18571161	18573522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_18571312_18572876
transcript_35731.known	chr16	-	2278	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	3644	junction_2	115.149641771045	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTCACTTTCTTTATA	-2	True	NA	-19	True	AATAAA	-16	NA	18801549	18791668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
transcript_35734.known	chr16	-	802	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	5826.7977644243	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	8517	False	NA	-36	True	AATAAA	-13	NA	18790260	18782968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
transcript_35736.known	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_4	5357.45718601652	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-4	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
transcript_35737.known	chr16	-	948	5	FSM	ENSG00000170540.15	ENST00000563861.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1670.04655623728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTGGCTACAGGAAGC	0	True	NA	NA	False	NA	NA	NA	18801547	18792878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18793371_18794598_18794684_18797924_18798045_18798700_18798835_18801430
transcript_35739.known	chr16	-	778	4	FSM	ENSG00000170540.15	ENST00000569976.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	3713	junction_1	117.218693996402	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGCCTATAATCCCAGC	-1	True	NA	NA	False	AGTAAA	-44	NA	18801548	18795175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18795582_18797924_18798045_18798700_18798835_18801430
transcript_35741.known	chr16	-	525	5	FSM	ENSG00000134419.15	ENST00000563390.5	525	5	0	0	0	0	multi-exon	FALSE	canonical	3	6512	junction_4	3157.1567410409	9657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCGTTTTGAGCCTT	8394	False	NA	-23	True	AATAAA	-26	NA	18790383	18782955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790309
transcript_35742.known	chr16	-	481	5	FSM	ENSG00000134419.15	ENST00000569365.6	481	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	5447.53280738171	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-4	True	NA	-35	True	AATAAA	-14	NA	18790334	18782967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788160_18788980_18789119_18790309
transcript_35743.known	chr16	-	418	4	FSM	ENSG00000134419.15	ENST00000574723.5	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	4949.11610514668	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCACTTGGTCGTTTTG	8415	False	NA	-29	True	AATAAA	-20	NA	18790362	18782961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788980_18789119_18790309
transcript_35744.known	chr16	-	589	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	5772.98106700516	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	8415	False	NA	-35	True	AATAAA	-14	NA	18790362	18782967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
transcript_35745.known	chr16	-	427	5	FSM	ENSG00000134419.15	ENST00000562935.5	427	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	5365.30625290859	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-4	True	NA	-35	True	AATAAA	-14	NA	18790334	18782967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18783103_18784737_18784824_18788062_18788106_18788980_18789119_18790309
transcript_35746.known	chr16	-	606	2	FSM	ENSG00000134419.15	ENST00000573554.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	6512	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCAGCCTGGGCGACAG	8437	False	NA	NA	False	NA	NA	NA	18790340	18788543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18789119_18790309
transcript_35747.known	chr16	-	16062	63	FSM	ENSG00000157106.18	ENST00000446231.7	16062	63	0	0	0	0	multi-exon	TRUE	canonical	2	26	junction_48	46.2788791070482	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCATTTAAGTTCTGAA	6477	False	NA	-7	True	AATAAA	-18	NA	18926408	18804859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_18809647_18811760_18811868_18811947_18812128_18815174_18815282_18815439_18815652_18816301_18816530_18817290_18817471_18819501_18819655_18828030_18828169_18829285_18829756_18829925_18830116_18830218_18830370_18832939_18833167_18834203_18834439_18834891_18835165_18835932_18836213_18836359_18836533_18837252_18837444_18838013_18838233_18838356_18838467_18838550_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236_18850468_18852066_18852206_18852317_18852463_18853582_18853868_18854655_18854905_18858169_18858291_18859021_18859182_18859555_18859704_18860666_18860777_18863649_18863852_18864001_18864145_18866620_18866776_18868189_18868355_18868522_18868720_18869103_18869304_18869853_18869995_18870609_18870712_18870800_18870889_18871363_18871483_18872183_18872346_18872493_18872625_18876123_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18925949
transcript_35748.nic	chr16	+	686	5	ISM	ENSG00000167186.11	ENST00000544894.6	819	6	4052	0	3980	0	3prime_fragment	FALSE	canonical	3	65	junction_1	5.93190525885234	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTGTTGATTTTTC	3950	False	NA	21	True	AATAAA	-29	NA	19071968	19078304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_35750.known	chr16	+	2546	5	FSM	ENSG00000261210.8	ENST00000636231.2	2546	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTTTTATTTTTATT	0	True	NA	NA	False	GATAAA	-11	NA	19285730	19310947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19285940_19298672_19298839_19304061_19304156_19307544_19307678_19309003
transcript_35755.known	chr16	-	633	3	FSM	ENSG00000260592.2	ENST00000561762.2	698	3	65	0	65	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAACTCCTCATCTTCCC	4	True	NA	NA	False	NA	NA	NA	19487899	19476915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19477081_19486928_19487321_19487823
transcript_35756.known	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	88.843682949324	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-18	True	NA	NA	False	NA	NA	NA	19522123	19502382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
transcript_35765.known	chr16	+	5549	15	FSM	ENSG00000103540.16	ENST00000396212.6	5549	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	24.8953933940578	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	1739	False	NA	NA	False	AATAAA	-20	NA	19523810	19553408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19524089_19525718_19525862_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19551195
transcript_35766.known	chr16	+	3606	31	FSM	ENSG00000103544.16	ENST00000417362.7	3606	31	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	35.2954041704519	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCTCCAGAAGAGAAAGA	-10	True	NA	55	True	NA	NA	NA	19555702	19701163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685_19616809_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
transcript_35772.nic	chr16	+	1044	10	NIC	ENSG00000174628.16	novel	3482	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	24.7526030555312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGTAAGCTGGTATCAT	-22	True	NA	5	True	AATAAA	-17	NA	19718270	19857585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486_19856562_19857454
transcript_35773.known	chr16	+	3482	10	FSM	ENSG00000174628.16	ENST00000320394.10	3482	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.1694384000276	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGAATTGCTCCATCGT	44	False	NA	NA	False	AATAAA	-17	NA	19716455	19858467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19716543_19717694_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_35778.known	chr16	+	946	8	FSM	ENSG00000174628.16	ENST00000561839.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	26.467538839962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTTCACTTTCTGCAT	22	True	NA	NA	False	AAGAAA	-4	NA	19718314	19856736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_3578.nnic	chr1	+	574	3	NNC	ENSG00000232022.8	novel	575	3	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTTGGGGGTAATTTG	NA	False	NA	3	True	AATAAA	-17	NA	46442838	46482489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_46443038_46453897_46453993_46482209
transcript_35781.known	chr16	+	1915	7	FSM	ENSG00000174628.16	ENST00000568300.6	1915	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	26.9814751264641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTTAGCTCTTCATC	-10	True	NA	6	True	AATAAA	-20	NA	19718282	19857539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19764113_19788837_19788923_19827025_19827138_19856486
transcript_35784.nnic	chr16	+	1487	6	NIC	ENSG00000174628.16	novel	1915	7	NA	NA	-8	-175	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	27.2426136778394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACAGCCTTTTAAATTT	-22	True	NA	5	True	AATAAA	-16	NA	19718270	19857364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_19718488_19730429_19730495_19733697_19733828_19788837_19788923_19827025_19827138_19856486
transcript_35785.nnic	chr16	+	1662	6	NIC	ENSG00000174628.16	novel	1915	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	16	junction_3	27.2426136778394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTTAGCTCTTCATC	-22	True	NA	6	True	AATAAA	-20	NA	19718270	19857539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_19718488_19730429_19730495_19733697_19733828_19788837_19788923_19827025_19827138_19856486
transcript_35787.known	chr16	+	473	3	FSM	ENSG00000174628.16	ENST00000566312.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATACTTTGATTTTACA	62	False	NA	NA	False	AATAAA	-17	NA	19718415	19734033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_19718488_19730429_19730495_19733697
transcript_3579.nic	chr1	+	556	3	FSM	ENSG00000232022.8	ENST00000455247.2	575	3	1	18	1	-18	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGCAAGCCACTAAGT	NA	False	NA	-11	True	AATAAA	-3	NA	46442838	46482475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46443038_46455819_46455911_46482209
transcript_35792.known	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_3	34.928498393146	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-20	True	NA	-8	True	AATAAA	-30	NA	19718227	19701936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
transcript_35795.nic	chr16	-	1930	4	NIC	ENSG00000103550.14	novel	6422	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	323.497552798575	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGCAGGGTGTTGTAC	-16	True	NA	-31	True	AATAAA	-23	NA	19718223	19706355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_19707222_19710508_19710587_19714117_19715038_19718157
transcript_35798.known	chr16	-	1020	2	FSM	ENSG00000103550.14	ENST00000564480.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGTAGAACCTGAGAC	676	False	NA	NA	False	AAAAAG	-37	NA	19718131	19714798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19715038_19717350
transcript_3580.known	chr1	+	398	2	FSM	ENSG00000232022.8	ENST00000635606.2	492	2	94	0	62	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	41	False	NA	7	True	AATAAA	-21	NA	46442923	46482493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46443038_46482209
transcript_35800.nic	chr16	-	947	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	5	3904	-3	635	5prime_fragment	FALSE	canonical	3	752	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAGGAAAGAGAGTG	-23	True	NA	15	True	AAGAAA	-3	NA	19718230	19714163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_35801.nic	chr16	-	893	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	8	3955	0	584	5prime_fragment	FALSE	canonical	3	752	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAGAGCAGCCAGTCA	-20	True	NA	-36	True	AAAAAG	-15	NA	19718227	19714214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_35803.nic	chr16	-	720	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	12	4124	4	415	5prime_fragment	FALSE	canonical	3	752	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGGAGGGAGATGCC	-16	True	NA	18	True	AAGAAA	-8	NA	19718223	19714383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_35806.nic	chr16	-	816	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-281	4321	-281	218	5prime_fragment	FALSE	canonical	3	752	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAAAAGGGGGCCC	291	False	NA	NA	False	AAAACA	-4	NA	19718516	19714580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_35808.nic	chr16	-	264	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	16	4576	8	-37	5prime_fragment	FALSE	canonical	3	752	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAAAGAAGGGTG	-12	True	NA	NA	False	AAGAAA	-3	NA	19718219	19714835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_19715038_19718157
transcript_3581.nic	chr1	+	700	2	FSM	ENSG00000232022.8	ENST00000692135.1	718	2	12	6	4	-6	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCCTCATGATCTCTGG	NA	False	NA	NA	False	AATAAA	-16	NA	46442841	46445702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_46443038_46445198
transcript_35810.known	chr16	-	2078	2	FSM	ENSG00000167191.12	ENST00000562348.1	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGTCTCTGCTGTCT	9947	False	NA	-6	True	AATAAA	-19	NA	19862340	19858970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_19860545_19861836
transcript_35812.known	chr16	+	2533	14	FSM	ENSG00000005187.12	ENST00000289416.10	2533	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	7.17325737038447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTGTGGTTCCTGAA	3	True	NA	NA	False	AATAAA	-17	NA	20764013	20797581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
transcript_35815.known	chr16	+	1517	9	FSM	ENSG00000005187.12	ENST00000440284.6	1517	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	4.18143217091943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCTTCTTGGTCTCCA	-11	True	NA	16	True	TATAAA	-21	NA	20764039	20786314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077
transcript_35821.known	chr16	-	4122	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	118.904110526087	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	NA	False	NA	-16	True	AATAAA	-16	NA	20742084	20733663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
transcript_35824.known	chr16	-	4357	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_2	17.5941909605289	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	-5	True	NA	-16	True	AATAAA	-16	NA	20741818	20733663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
transcript_3583.known	chr1	-	2686	13	FSM	ENSG00000079277.22	ENST00000650508.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41.8535807574719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-4	True	NA	-1	True	AATAAA	-23	NA	46604294	46557407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_35833.known	chr16	-	3502	9	FSM	ENSG00000196678.14	ENST00000357967.9	3502	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	23.9099874529453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-10	True	NA	-2	True	AATAAA	-21	NA	20806472	20796339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_35835.known	chr16	-	2646	9	FSM	ENSG00000196678.14	ENST00000569729.5	2646	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	30.0663329157382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTATGCATTTGT	-14	True	NA	-6	True	AATAAA	-17	NA	20806476	20796343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_35837.nic	chr16	+	2745	20	NIC	ENSG00000005189.20	novel	2691	20	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	9.89193689387803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	11	True	NA	11	True	AATAAA	-20	NA	20806488	20849665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_20806722_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_35838.known	chr16	+	2691	20	FSM	ENSG00000005189.20	ENST00000261377.11	2691	20	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	8.8452375404403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	0	True	NA	11	True	AATAAA	-20	NA	20806526	20849665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_35839.known	chr16	+	2604	19	FSM	ENSG00000005189.20	ENST00000348433.10	2604	19	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	10.2083238851052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	-6	True	NA	11	True	AATAAA	-20	NA	20806520	20849665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_3584.nic	chr1	-	2635	13	NIC	ENSG00000079277.22	novel	2719	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	41.1105386596781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	-5	True	NA	-11	True	AATAAA	-13	NA	46604295	46557417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_35845.known	chr16	+	1626	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	56.8391370448215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	38	False	NA	9	True	AATAAA	-15	NA	20900752	20925004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
transcript_35846.known	chr16	+	1558	4	FSM	ENSG00000102897.10	ENST00000439021.5	1558	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	63.8818353594266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	348	False	NA	9	True	AATAAA	-15	NA	20900234	20925004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900536_20915555_20915715_20920121_20920215_20923999
transcript_35848.known	chr16	+	1378	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	44.6119067315243	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	-4	True	NA	11	True	AATAAA	-17	NA	20900770	20925006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
transcript_35849.known	chr16	+	931	4	FSM	ENSG00000102897.10	ENST00000562740.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63.92356546863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCGGAAGGATGTAAG	3	True	NA	NA	False	NA	NA	NA	20900665	20924381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900890_20902485_20902718_20920121_20920215_20923999
transcript_3585.nic	chr1	-	2641	12	NIC	ENSG00000079277.22	novel	2686	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	43.4444644069104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-3	True	NA	-1	True	AATAAA	-23	NA	46604293	46557407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_35851.nnic	chr16	-	3077	4	NIC	ENSG00000188215.10	novel	6136	3	NA	NA	-16	922	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	30.6847772609735	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATACTCTTGAGGTAATG	-16	True	NA	-16	True	AATAAA	-15	NA	20900374	20858073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_20860370_20862107_20862644_20896307_20896382_20900203
transcript_35852.known	chr16	+	931	4	FSM	ENSG00000102897.10	ENST00000567165.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	58.1262992686328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTCACTACAACCT	-13	True	NA	NA	False	NA	NA	NA	20900410	20921463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_20900536_20915555_20915715_20920121_20920607_20921301
transcript_35854.nnic	chr16	+	1222	3	NIC	ENSG00000102897.10	novel	1378	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	78	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	-7	True	NA	11	True	AATAAA	-17	NA	20900767	20925006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_20900890_20920121_20920215_20923999
transcript_35855.known	chr16	-	6136	3	FSM	ENSG00000188215.10	ENST00000324344.9	6136	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	5.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGATATTTCTACAAAAA	0	True	NA	-24	True	AATAAA	-15	NA	20900358	20854924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_20860370_20862107_20862644_20900203
transcript_35859.known	chr16	+	713	6	FSM	ENSG00000011638.11	ENST00000572599.5	713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.2990066116245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTATGGCTTAGAAGA	26	False	NA	NA	False	NA	NA	NA	21158704	21179612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21160977_21161009_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_3586.known	chr1	-	1270	12	FSM	ENSG00000079277.22	ENST00000428112.7	1270	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	42.6034957631374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCTGATGGCCTCT	-4	True	NA	NA	False	NA	NA	NA	46604255	46558698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_35867.known	chr16	+	1378	6	FSM	ENSG00000011638.11	ENST00000451578.6	1378	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	47.4737822381996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTTTTTTTTTT	10	True	NA	NA	False	NA	NA	NA	21158688	21180220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21179474
transcript_35872.known	chr16	+	1812	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.0415945787923	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	0	True	NA	14	True	AATAAA	-20	NA	21158678	21180609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
transcript_35876.known	chr16	+	1717	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.4693686064843	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	-5	True	NA	21	True	AATAAA	-27	NA	21158673	21180616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_35881.nic	chr16	+	1758	4	NIC	ENSG00000011638.11	novel	1812	5	NA	NA	-60	0	intron_retention	FALSE	canonical	3	10	junction_3	47.5558151602468	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	5052	False	NA	21	True	AATAAA	-27	NA	21158600	21180616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_21158747_21160977_21161279_21170436_21170606_21179474
transcript_35882.known	chr16	+	584	4	FSM	ENSG00000011638.11	ENST00000572258.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	46.2048578494609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGATTATGGCTTAGA	-18	True	NA	NA	False	NA	NA	NA	21158660	21179609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21179474
transcript_35883.nic	chr16	+	1743	2	ISM	ENSG00000011638.11	ENST00000577162.1	305	4	-109	4308	-60	-4308	intron_retention	FALSE	canonical	3	91	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTATTTTGTGGTGTAT	5052	False	NA	NA	False	TATAAA	-25	NA	21158600	21162574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_21158747_21160977
transcript_35888.nnic	chr16	-	1337	9	NIC	ENSG00000103316.12	novel	1244	8	NA	NA	81	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	62.8628218822541	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTCGGTAACTTC	5691	False	NA	-14	True	AATAAA	-19	NA	21284023	21258520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_21258846_21261253_21261339_21262036_21262159_21267553_21267738_21269789_21269892_21275531_21275595_21277430_21277585_21278081_21278170_21283809
transcript_35891.known	chr16	+	1817	5	FSM	ENSG00000197006.15	ENST00000396014.8	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	294.169487710741	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAACAAA	34	False	NA	NA	False	NA	NA	NA	21599557	21656119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655229
transcript_35892.nic	chr16	+	2429	2	ISM	ENSG00000197006.15	ENST00000396014.8	1817	5	25371	-1352	7031	0	3prime_fragment	FALSE	canonical	3	319	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	NA	False	NA	13	True	AATAAA	-19	NA	21624928	21657471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_21625116_21655229
transcript_35900.nnic	chr16	-	1421	8	NIC	ENSG00000248124.9	novel	1178	8	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	22.1221100960564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	21820487	21810426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
transcript_35901.known	chr16	-	1151	8	FSM	ENSG00000248124.9	ENST00000551681.2	1178	8	27	0	10	0	multi-exon	FALSE	canonical	2	6	junction_6	24.4365066476953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	21820410	21810426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819301_21819482_21820294
transcript_35905.nic	chr16	-	517	2	ISM	ENSG00000248124.9	ENST00000551681.2	1178	8	-50	8731	-46	-8731	5prime_fragment	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCACGTAGAGATTTG	NA	False	NA	NA	False	NA	NA	NA	21820487	21819157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_21819482_21820294
transcript_35911.known	chr16	+	1914	14	FSM	ENSG00000140740.11	ENST00000268379.9	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_11	56.5333854340871	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATTCCCATTCATTC	-10	True	NA	56	True	AATAAA	-38	NA	21953360	21983660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407_21965506_21968627_21968686_21971524_21971621_21971922_21972123_21973895_21973977_21976166_21976244_21980546_21980701_21983087
transcript_3592.nic	chr1	-	712	6	ISM	ENSG00000079277.22	ENST00000496619.6	738	8	-1	6370	-1	0	5prime_fragment	FALSE	canonical	3	69	junction_5	40.8685698306168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-5	True	NA	2	True	AATAAA	-20	NA	46604295	46574825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_35921.known	chr16	+	535	5	FSM	ENSG00000140740.11	ENST00000630839.2	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	420.79589767487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATCTCCTCATCTGTT	NA	False	NA	NA	False	AAGAAA	-24	NA	21953287	21959405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21959338
transcript_35923.known	chr16	+	4469	3	FSM	ENSG00000185716.12	ENST00000542527.7	4469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTGAAAT	-6	True	NA	NA	False	AATAAA	-24	NA	22008110	22084654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22008408_22075486_22075700_22080695
transcript_35924.known	chr16	+	695	2	FSM	ENSG00000185716.12	ENST00000562695.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACATAAAAATATAAAT	166	False	NA	NA	False	AATAAA	-15	NA	22008282	22076056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22008408_22075486
transcript_35928.known	chr16	+	3690	21	FSM	ENSG00000058600.16	ENST00000299853.10	3690	21	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	30.5697562960518	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATATGTCTCAGCTT	-11	True	NA	9	True	AGTAAA	-15	NA	22297408	22335096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_35932.known	chr16	+	2469	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	44.2218030730997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	13	True	NA	34	True	AATAAA	-36	NA	22297432	22334025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
transcript_35933.known	chr16	-	2704	5	FSM	ENSG00000140743.8	ENST00000268383.7	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	3.26917420765551	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	-16	True	NA	NA	False	AATAAA	-19	NA	22374619	22345935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22364901_22365015_22374230
transcript_35934.known	chr16	+	2661	9	FSM	ENSG00000257838.5	ENST00000550753.5	2661	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11102430216445	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTTAATTTTTTT	9282	False	NA	NA	False	ATTAAA	-12	NA	22545697	22576865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_22547057_22552383_22552514_22556842_22557031_22561003_22561160_22568062_22568206_22568506_22568644_22569164_22569263_22573221_22573418_22576611
transcript_35937.known	chr16	-	2935	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	15.0244592248773	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTGTTTCCTTCTTCT	-14	True	NA	-1	True	AATAAA	-20	NA	23453189	23388492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
transcript_35938.nnic	chr16	+	821	4	NNC	ENSG00000260136.6	novel	730	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.24264068711928	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	NA	False	NA	-5	True	NA	NA	NA	23452725	23457588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_23453270_23454742_23454798_23455469_23455531_23457427
transcript_35939.known	chr16	+	730	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	NA	False	NA	-5	True	NA	NA	NA	23452757	23457588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23453266_23455469_23455531_23457427
transcript_3594.nic	chr1	-	567	4	ISM	ENSG00000079277.22	ENST00000528077.6	1557	11	-25	22047	1	0	5prime_fragment	FALSE	canonical	3	58	junction_3	56.1129812669641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-3	True	NA	-18	True	AATAAA	-19	NA	46604293	46580439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604184
transcript_35940.nnic	chr16	+	919	3	NNC	ENSG00000260136.6	novel	579	2	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	NA	False	NA	10	True	AATAAA	-33	NA	23452725	23455789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_23453270_23454742_23454798_23455469
transcript_35941.known	chr16	+	438	2	FSM	ENSG00000260136.6	ENST00000562842.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATAGTCTTTTCTCAT	NA	False	NA	13	True	CATAAA	-16	NA	23453006	23457606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23453266_23457427
transcript_35942.known	chr16	+	579	2	FSM	ENSG00000260136.6	ENST00000565747.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	NA	False	NA	10	True	AATAAA	-33	NA	23453006	23455789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23453266_23455469
transcript_35943.nnic	chr16	+	1230	2	NNC	ENSG00000260136.6	novel	658	2	NA	NA	-32	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAAATTTATTTATT	NA	False	NA	NA	False	AATACA	-14	NA	23452725	23455428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_23453270_23454742
transcript_35945.known	chr16	-	5973	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	35.1425112043804	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTGTCGTCTTTTTT	-21	True	NA	-5	True	AATAAA	-15	NA	23510494	23463541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
transcript_35946.known	chr16	-	5196	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_6	17.1464281994822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCTGTGCTATC	-1	True	NA	-28	True	AATAAA	-37	NA	23557350	23520753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_3595.nic	chr1	-	527	4	ISM	ENSG00000079277.22	ENST00000496619.6	738	8	-1	11984	-1	0	5prime_fragment	FALSE	canonical	3	69	junction_3	50.9531375110721	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-5	True	NA	-18	True	AATAAA	-19	NA	46604295	46580439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604226
transcript_35950.known	chr16	-	599	1	FSM	ENSG00000103356.18	ENST00000564759.1	599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATACATCGTGGCTTC	NA	False	NA	-32	True	AAGAAA	-28	NA	23523645	23523046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23523000_23523600
transcript_35953.known	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_2	123.704284485219	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-5	True	NA	-27	True	AATAAA	-14	NA	23596316	23581013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
transcript_35954.known	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1574.63794780472	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	34	False	NA	-27	True	AATAAA	-14	NA	23596277	23581013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
transcript_35955.known	chr16	-	4008	13	FSM	ENSG00000083093.10	ENST00000261584.9	4008	13	0	0	0	0	multi-exon	TRUE	canonical	1	44	junction_1	22.4405077680718	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTGGCATGTTATTG	-15	True	NA	-11	True	AATAAA	-17	NA	23641310	23603164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
transcript_35956.nic	chr16	-	3851	12	NIC	ENSG00000083093.10	novel	4008	13	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	2	10	junction_1	32.0286545259679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATGTTATTGTTTCC	-2	True	NA	-6	True	AATAAA	-22	NA	23641297	23603159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_23603670_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
transcript_3596.known	chr1	-	2815	4	FSM	ENSG00000142961.16	ENST00000319928.9	2738	4	-73	-4	-73	4	multi-exon	FALSE	canonical	3	9	junction_3	4.92160768674447	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGGAAGCGGTGATCT	NA	False	NA	NA	False	AATAAA	-20	NA	46616884	46607714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46609685_46610001_46610205_46612903_46613372_46616710
transcript_35967.nnic	chr16	+	1509	7	NNC	ENSG00000166847.10	novel	10954	6	NA	NA	-35	-11	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_6	138.283525169607	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCTGGAACTGCTTC	-7	True	NA	8	True	AATAAA	-19	NA	23641430	23669861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046_23667574_23669442
transcript_35969.known	chr16	+	878	6	FSM	ENSG00000166847.10	ENST00000563998.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	149.418338901221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAACAGTCACTTTG	-16	True	NA	103	True	NA	NA	NA	23641470	23667371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
transcript_3597.known	chr1	-	535	6	FSM	ENSG00000123472.12	ENST00000474020.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	91.0757926125268	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTTAATAAAGATGC	9568	False	NA	NA	False	AATAAA	-41	NA	46668109	46652420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_35971.known	chr16	+	10954	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	24.9158584038359	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	-21	True	NA	28	True	AATAAA	-31	NA	23641465	23677472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
transcript_35974.known	chr16	+	523	3	FSM	ENSG00000166847.10	ENST00000568272.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	200	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTTTGCAAGTATAGT	42	False	NA	NA	False	AATAAA	-29	NA	23641528	23651147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23641591_23642954_23643024_23650755
transcript_35975.known	chr16	+	2160	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	0	0	0	0	multi-exon	TRUE	canonical	3	1524	junction_2	137.598449603669	789	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTATTTCCTGAG	-16	True	NA	28	True	ATTAAA	-16	NA	23678888	23690367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
transcript_35979.known	chr16	+	8010	17	FSM	ENSG00000166501.14	ENST00000643927.1	8010	17	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	9.27698765763974	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTTTATATGTCTTT	2	True	NA	NA	False	ATTAAA	-19	NA	23835982	24220611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_23836349_23837374_23837407_23988507_23988591_24032135_24032248_24035418_24035548_24092790_24092948_24094162_24094298_24112972_24113070_24123834_24123982_24154683_24154858_24172269_24172362_24174517_24174581_24180789_24180929_24185110_24185192_24185459_24185568_24191089_24191231_24214657
transcript_3598.known	chr1	-	5817	11	FSM	ENSG00000159658.15	ENST00000371933.8	5817	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	51.4553204246169	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGACTAAAGCCTCT	-1	True	NA	0	True	AATAAA	-22	NA	46719114	46675158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_35982.known	chr16	+	1917	4	FSM	ENSG00000006116.4	ENST00000005284.4	1917	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGCCGGGGGTGTTTTGT	3	True	NA	NA	False	ATTAAA	-23	NA	24256334	24362412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_24256966_24346733_24346818_24354832_24354974_24361351
transcript_35986.nic	chr16	+	242	3	ISM	ENSG00000090905.19	ENST00000315183.11	8303	24	3	75451	3	-7	5prime_fragment	FALSE	canonical	3	182	junction_2	22	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGACGACAAGAAAA	-17	True	NA	NA	False	AAGAAA	-8	NA	24729697	24750770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_24729847_24730252_24730301_24750725
transcript_35987.known	chr16	-	1292	3	FSM	ENSG00000140750.17	ENST00000571843.1	1292	3	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	11	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	178	False	NA	-12	True	ATTAAA	-19	NA	24931160	24919394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_24920261_24927683_24927733_24930783
transcript_35988.known	chr16	+	1032	1	FSM	ENSG00000262587.3	ENST00000619106.1	1032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGCGGTGTCATTAGAGT	4	True	NA	11	True	ATTAAA	-24	NA	25031743	25032775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25031700_25032800
transcript_35989.known	chr16	-	534	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGATTTGCTTAGTGAAT	18	True	NA	-1	True	AATAAA	-18	NA	25107102	25106568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_25106600_25107100
transcript_35991.known	chr16	+	1529	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	291.248495189955	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	-13	True	NA	31	True	AATAAA	-19	NA	25111730	25178231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_35996.known	chr16	+	1352	11	FSM	ENSG00000205629.12	ENST00000399069.8	1352	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	247.678905036339	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	-2	True	NA	28	True	AATAAA	-16	NA	25111741	25178228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_36.known	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13893	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00096_+_0_1100
transcript_3601.known	chr1	+	2256	12	FSM	ENSG00000186377.8	ENST00000371901.4	2256	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.43688521524088	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTATGGTATTCT	-12	True	NA	10	True	AATAAA	-19	NA	47023668	47050751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_47023995_47029989_47030132_47031435_47031481_47033240_47033369_47035805_47035934_47036016_47036172_47038659_47038767_47039341_47039533_47046466_47046601_47048564_47048630_47049421_47049505_47049999
transcript_36013.known	chr16	+	1168	9	FSM	ENSG00000205629.12	ENST00000564011.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	256.903161473346	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTGTTTAAATAAATCTCA	-9	True	NA	-2	True	NA	NA	NA	25111734	25178198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_36020.known	chr16	+	612	4	FSM	ENSG00000205629.12	ENST00000570981.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	261.72037665332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGACAAGGTTTTTG	103	False	NA	62	True	NA	NA	NA	25111931	25140503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170
transcript_36021.known	chr16	+	2431	8	FSM	ENSG00000155666.12	ENST00000286096.9	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	7.02473763036814	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	0	True	NA	13	True	AATAGA	-20	NA	27203525	27221768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_36031.known	chr16	-	1042	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	5.01426536422407	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-18	True	NA	-4	True	AATAAA	-22	NA	27268772	27224993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_36033.known	chr16	-	1853	7	FSM	ENSG00000169189.17	ENST00000565070.5	1853	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	5.12076383191241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATAAACCATCCTGGG	13	True	NA	-35	True	NA	NA	NA	27268741	27225024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_27225237_27225725_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_36035.known	chr16	+	2900	11	FSM	ENSG00000077238.14	ENST00000568746.5	2900	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	39.7497169801245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCAGCCAGGCTGGCA	0	True	NA	NA	False	NA	NA	NA	27313933	27363903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_27314021_27340185_27340274_27341069_27341314_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_36036.known	chr16	+	3624	11	FSM	ENSG00000077238.14	ENST00000395762.7	3624	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	13.9413055342748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	40	True	NA	33	True	AATAAA	-18	NA	27313973	27364778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_36037.known	chr16	+	3539	10	FSM	ENSG00000077238.14	ENST00000543915.6	3539	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	15.1249936230983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	-8	True	NA	33	True	AATAAA	-18	NA	27313925	27364778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_36038.known	chr16	+	2953	9	FSM	ENSG00000103522.16	ENST00000395754.4	2953	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.72753437013566	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGGTCAAGTTGTTTGT	-4	True	NA	16	True	AATAAA	-33	NA	27427243	27450485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_27427362_27430055_27430121_27434346_27434450_27437487_27437688_27442961_27443117_27444541_27444720_27445176_27445277_27446006_27446089_27448533
transcript_36040.nic	chr16	-	2382	14	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	-60	37075	-60	-14550	5prime_fragment	FALSE	canonical	3	404	junction_6	69.399623142404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATAATAAAATGGGCATA	NA	False	NA	NA	False	NA	NA	NA	27549973	27497687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_36041.known	chr16	-	7015	37	FSM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	0	0	0	multi-exon	TRUE	canonical	3	404	junction_29	76.2807719732798	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-8	True	NA	-8	True	ATTAAA	-16	NA	27549913	27460612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464394_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_36042.known	chr16	-	7090	37	FSM	ENSG00000077235.18	ENST00000356183.9	7090	37	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	96.3669203271191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-8	True	NA	-8	True	ATTAAA	-16	NA	27549913	27460612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464319_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_36046.nic	chr16	+	692	5	ISM	ENSG00000047578.14	ENST00000261588.10	6599	28	-1	148926	-1	164	5prime_fragment	FALSE	canonical	3	24	junction_1	8.25757228245687	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGTCCCAGCTACTCA	-2	True	NA	NA	False	AATAAA	-33	NA	27550142	27631418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064
transcript_36048.known	chr16	-	1173	6	FSM	ENSG00000169181.13	ENST00000380897.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.09544511501033	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCGGTGTATGGAGG	NA	False	NA	-3	True	AATAAA	-17	NA	27888157	27790893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_27791468_27807486_27807555_27828788_27828957_27844949_27845062_27884485_27884639_27888059
transcript_36050.known	chr16	-	2913	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	0	0	0	multi-exon	TRUE	canonical	3	2702	junction_12	503.475845994622	601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-8	True	NA	NA	False	ACTAAA	-16	NA	28403841	28379714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
transcript_3606.known	chr1	-	5351	19	FSM	ENSG00000123473.17	ENST00000337817.10	5351	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	34.0421398262597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTTAATAAAATGTCTA	NA	False	NA	-40	True	TATAAA	-38	NA	47314892	47250172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035_47314564_47314801
transcript_36061.known	chr16	-	1685	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	49.2474928859892	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-12	True	NA	-6	True	AATAAA	-20	NA	28492074	28477278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_36062.known	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_10	33.9255637764654	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-12	True	NA	1	True	AATAAA	-27	NA	28492074	28477271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_36063.known	chr16	-	1452	15	FSM	ENSG00000188603.22	ENST00000567963.6	1452	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	64.9621946573072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAACTGTGCTCCCAGC	-12	True	NA	NA	False	NA	NA	NA	28492074	28477432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713_28491836_28492019
transcript_36066.known	chr16	-	1616	15	FSM	ENSG00000188603.22	ENST00000568452.6	1616	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	50.6907390004147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGAGACCCTCCATG	16	True	NA	NA	False	NA	NA	NA	28492046	28477447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_36070.known	chr16	-	1720	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	56.0089806830991	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATATCGTTTTTGT	3565	False	NA	-7	True	AATAAA	-19	NA	28492005	28477279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_36072.known	chr16	-	1608	14	FSM	ENSG00000188603.22	ENST00000333496.14	1608	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	66.2831473400424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACTTCTTATATCGTT	3679	False	NA	-12	True	AATAAA	-14	NA	28491891	28477284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28489289_28489387_28491481_28491561_28491713
transcript_36075.known	chr16	-	1536	14	FSM	ENSG00000188603.22	ENST00000636172.1	1536	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	63.0762664130922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	4	True	NA	NA	False	GGGGCT	-44	NA	28492058	28477515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_36076.known	chr16	-	1173	14	FSM	ENSG00000188603.22	ENST00000355477.10	1173	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	64.0437165781007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	3811	False	NA	NA	False	GGGGCT	-44	NA	28491759	28477515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_36078.known	chr16	-	1957	14	FSM	ENSG00000188603.22	ENST00000561689.6	1957	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	35.0966543694551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGACTTCTTATAT	18	True	NA	-16	True	AATAAA	-10	NA	28492044	28477288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_36081.known	chr16	-	1577	13	FSM	ENSG00000188603.22	ENST00000637578.1	1577	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	78.8565416859417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCCAGCCATTGTCTC	-3	True	NA	-88	True	NA	NA	NA	28492023	28477360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_3609.known	chr1	-	5019	17	FSM	ENSG00000123473.17	ENST00000371877.8	5019	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_3	23.0268186035327	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGTCTGTTATAGTT	-25	True	NA	-6	True	AATAAA	-22	NA	47314147	47250138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
transcript_36091.known	chr16	-	1469	12	FSM	ENSG00000188603.22	ENST00000357806.11	1469	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	89.1220724717109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	3587	False	NA	-18	True	AATAAA	-8	NA	28491983	28477290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_36099.known	chr16	-	1406	7	FSM	ENSG00000233232.7	ENST00000452313.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.02305952453618	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	NA	False	NA	NA	False	AAAAAG	-41	NA	28470547	28456371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28457027_28458385_28458422_28458530_28458592_28462673_28462870_28462981_28463082_28466719_28466903_28470372
transcript_36102.nic	chr16	+	1268	11	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_5	50.3531528307811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTCTCCTGGGTTTTA	NA	False	NA	20	True	ATTAAA	-14	NA	28553890	28591788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28588609_28588692_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_36103.known	chr16	+	1159	10	FSM	ENSG00000176476.9	ENST00000317058.8	1159	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	9.44117590499911	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	-3	True	NA	22	True	ATTAAA	-16	NA	28553919	28591790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_36104.nic	chr16	+	1840	9	ISM	ENSG00000176476.9	ENST00000317058.8	1159	10	-29	2	-24	0	intron_retention	FALSE	canonical	3	110	junction_1	9.97183533758957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTCTCCTGGGTTTTA	NA	False	NA	20	True	ATTAAA	-14	NA	28553890	28591788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772
transcript_36107.nic	chr16	+	1256	9	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	-24	0	intron_retention	FALSE	canonical	3	110	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTCTCCTGGGTTTTA	NA	False	NA	20	True	ATTAAA	-14	NA	28553890	28591788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590443_28590630_28590667_28590772_28590936_28591589
transcript_36110.known	chr16	-	1031	8	FSM	ENSG00000197165.11	ENST00000335715.9	1031	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.68534797531291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTCTCTATTCCAAG	-1	True	NA	-3	True	AATAAA	-18	NA	28597050	28591942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28592141_28592262_28592444_28593251_28593347_28593441_28593569_28595366_28595465_28595549_28595676_28595782_28595935_28596996
transcript_36111.known	chr16	-	1162	8	FSM	ENSG00000196502.13	ENST00000314752.12	1569	8	37	370	-17	0	multi-exon	FALSE	canonical	3	20	junction_6	11.7438650940369	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	3	True	NA	-26	True	NA	NA	NA	28610007	28605627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930
transcript_36113.known	chr16	-	939	8	FSM	ENSG00000196502.13	ENST00000566189.5	939	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	15.2917211161425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGGCAGGCTGCAGC	76	False	NA	NA	False	NA	NA	NA	28609990	28605864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608891_28609930
transcript_36114.nnic	chr16	-	868	6	NIC	ENSG00000197165.11	novel	1031	8	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.71593044902064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTCTCTATTCCAAG	-1	True	NA	-3	True	AATAAA	-18	NA	28597109	28591942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_28592141_28592262_28592444_28595366_28595465_28595549_28595676_28595782_28595935_28596996
transcript_36116.known	chr16	-	432	1	FSM	ENSG00000275441.1	ENST00000613454.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTGCTGCTTGCTGG	49	False	NA	0	True	AATAAA	-28	NA	28554140	28553708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28553700_28554100
transcript_36117.known	chr16	+	3128	21	FSM	ENSG00000184110.15	ENST00000566501.5	3128	21	0	0	0	0	multi-exon	TRUE	canonical	2	72	junction_1	892.055906319778	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGATTGCTTGTTGC	NA	False	NA	NA	False	ACTAAA	-18	NA	28688557	28735598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28688829_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_36120.known	chr16	+	2910	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	0	0	0	0	multi-exon	FALSE	canonical	3	3157	junction_1	369.781459107944	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-6	True	NA	NA	False	ACTAAA	-16	NA	28711463	28735596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_36124.known	chr16	+	3137	21	FSM	ENSG00000184110.15	ENST00000395587.5	3137	21	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	854.043469326942	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGCTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	28711416	28735727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_36132.known	chr16	+	2986	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	3269	junction_7	344.966857776206	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	33	False	NA	NA	False	ACTAAA	-17	NA	28711526	28735597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_36135.known	chr16	+	1963	2	FSM	ENSG00000251417.2	ENST00000507031.2	1963	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTTTGTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	28802742	28817828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28803013_28816135
transcript_3614.known	chr1	+	2937	6	FSM	ENSG00000162368.14	ENST00000371873.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_5	18.088670487352	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTTTAGATTTCTG	-8	True	NA	33	True	AATAAA	-23	NA	47333789	47378839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_47334117_47368468_47368616_47372954_47373108_47374908_47374986_47375196_47375294_47376703
transcript_36142.known	chr16	+	1294	9	FSM	ENSG00000168488.19	ENST00000568266.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	167.006549272776	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCGTGGTATCAATGG	10	True	NA	NA	False	NA	NA	NA	28824137	28830768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614
transcript_36149.known	chr16	-	2011	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	0	0	0	multi-exon	TRUE	canonical	3	1397	junction_5	90.0634892659919	1980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTCAGTGAAGTT	14	False	28846362	-15	True	AATAAA	-16	NA	28846348	28842410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
transcript_36174.known	chr16	+	3033	10	FSM	ENSG00000178188.15	ENST00000359285.9	3033	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	37.1227526650718	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	6	True	NA	21	True	AATAAA	-22	NA	28863804	28874205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872759_28873169_28873270_28873446
transcript_36175.known	chr16	-	2307	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	10.6258986548067	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-31	True	NA	-3	True	AATAAA	-17	NA	28925238	28904420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
transcript_36176.nic	chr16	-	2387	12	ISM	ENSG00000177548.13	ENST00000358201.9	2307	13	407	0	-4	0	3prime_fragment	TRUE	canonical	3	75	junction_4	10.6948663053474	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	892	False	NA	-3	True	AATAAA	-17	NA	28924831	28904420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402
transcript_36179.nnic	chr16	-	483	3	NIC	ENSG00000260442.6	novel	437	3	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	40	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-15	True	NA	-8	True	ATTAAA	-19	NA	28879931	28878956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_28879108_28879488_28879756_28879866
transcript_36180.nnic	chr16	-	430	3	FSM	ENSG00000260442.6	ENST00000686287.1	437	3	7	0	5	0	multi-exon	FALSE	canonical	3	37	junction_1	21.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-15	True	NA	-8	True	ATTAAA	-19	NA	28879931	28878956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28879108_28879541_28879756_28879866
transcript_36181.known	chr16	-	558	2	FSM	ENSG00000260442.6	ENST00000561547.5	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	21	True	NA	-8	True	ATTAAA	-19	NA	28879895	28878956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28879108_28879488
transcript_36182.known	chr16	-	530	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	16	0	16	0	multi-exon	FALSE	canonical	3	37	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-4	True	NA	-8	True	ATTAAA	-19	NA	28879920	28878956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_28879108_28879541
transcript_36184.known	chr16	+	4569	8	FSM	ENSG00000176953.13	ENST00000320805.9	4564	8	0	-5	0	5	multi-exon	FALSE	canonical	3	233	junction_3	14.7786387487247	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTGGAGGATTTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	28950936	28967097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28951399_28952131_28952205_28954564_28954683_28955977_28956059_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_36186.nnic	chr16	+	2203	14	NNC	ENSG00000169682.18	novel	2102	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	255.747286508016	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-9	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28978945_28979029_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_36189.known	chr16	+	2102	13	FSM	ENSG00000169682.18	ENST00000323081.12	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	155.412957953962	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	12	True	NA	13	True	AATAAA	-14	NA	28974793	28984543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_36190.nnic	chr16	+	1878	13	NIC	ENSG00000169682.18	novel	1979	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	184.527079464114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-4	True	NA	10	True	AATAAA	-11	NA	28974777	28984540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28974864_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_36192.nic	chr16	+	1964	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	223.760165289195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-9	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_36194.nic	chr16	+	1983	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	232.841378277179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-9	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_28975101_28975187_28975393_28975491_28975558_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_36198.known	chr16	-	1840	2	FSM	ENSG00000260908.1	ENST00000562618.1	1840	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29107711	29103656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29105140_29107354
transcript_3620.known	chr1	-	5003	13	FSM	ENSG00000132122.12	ENST00000371847.8	5003	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.7704085029937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTTTGTTTATCCATT	-5	True	NA	NA	False	AATATA	-1	NA	48472204	48295372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_48298894_48305786_48305879_48355669_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_36200.known	chr16	+	1356	8	FSM	ENSG00000213648.11	ENST00000360423.12	1356	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	77.8357768848317	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	28	False	NA	11	True	AATAAA	-19	NA	29459912	29464966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29459986_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
transcript_3621.known	chr1	-	2297	13	FSM	ENSG00000132122.12	ENST00000371843.7	2297	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	17.7920081934434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAACCACAATGTGA	189	False	NA	NA	False	TTTAAA	-9	NA	48472010	48297836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_48298894_48305786_48305879_48355717_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_36222.known	chr16	+	762	5	FSM	ENSG00000181625.17	ENST00000351581.4	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	401.850329724886	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	33	False	NA	NA	False	AATAAA	-14	NA	29454561	29458219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29454931_29455397_29455450_29457631_29457760_29457927_29458016_29458094
transcript_36225.known	chr16	-	937	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_3	984.792363902158	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTGATAAGTTTTT	3	True	NA	NA	False	NA	NA	NA	29454347	29443229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
transcript_36228.known	chr16	-	1305	5	FSM	ENSG00000261740.7	ENST00000568556.2	1305	5	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	994.003521120524	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGCCATTATATTTA	375	False	NA	NA	False	AATAAA	-14	NA	29454651	29443269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29454015_29454114_29454190
transcript_36234.known	chr16	-	1012	3	FSM	ENSG00000183336.9	ENST00000330978.4	399	3	-613	0	-613	0	multi-exon	FALSE	canonical	3	2413	junction_1	236.5	774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	62	False	NA	NA	False	ATTAAA	-14	NA	29454964	29453592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29453733_29454015_29454114_29454190
transcript_36241.known	chr16	+	579	4	FSM	ENSG00000103485.19	ENST00000562473.1	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	319.762759279786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAACTCTGGCTCTGCC	22	True	NA	-92	True	NA	NA	NA	29679181	29697524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29679211_29694663_29694756_29696995_29697128_29697198
transcript_36243.nnic	chr16	+	900	4	NNC	ENSG00000103485.19	novel	1237	5	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	319.762759279786	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTTCTGCGGTGATAAT	-23	True	NA	22	True	AATAAA	-13	NA	29679136	29697638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_29679211_29694663_29694918_29696995_29697128_29697198
transcript_36245.known	chr16	+	2200	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	49.8285950924656	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	20	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
transcript_36247.known	chr16	+	913	3	FSM	ENSG00000103485.19	ENST00000219771.7	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	349.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAGACCAGCCTGG	NA	False	NA	NA	False	NA	NA	NA	29679007	29697776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29679211_29696995_29697128_29697198
transcript_36249.known	chr16	+	1853	3	FSM	ENSG00000197471.12	ENST00000563039.2	1853	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTCAAAAAGGTGTTC	8	False	NA	92	True	AATAAA	-29	NA	29663254	29670876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29663317_29663694_29665082_29670472
transcript_36257.known	chr16	+	2081	14	FSM	ENSG00000079616.14	ENST00000160827.9	2081	14	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_8	89.840489810928	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	10	True	NA	25	True	AATACA	-15	NA	29790750	29805384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_36264.known	chr16	+	2493	14	FSM	ENSG00000079616.14	ENST00000400751.9	2493	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	408.196292263601	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	191	False	NA	25	True	AATACA	-15	NA	29790970	29805384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29791462_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_36268.nic	chr16	+	2873	13	FSM	ENSG00000079616.14	ENST00000691169.1	2853	13	-20	0	-20	0	multi-exon	TRUE	canonical	3	1334	junction_8	87.5428466523679	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	478	False	NA	25	True	AATACA	-15	NA	29790706	29805384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29805027_29805114_29805175_29805262
transcript_36282.known	chr16	+	2698	6	FSM	ENSG00000103495.15	ENST00000219782.10	2698	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	437.835768296744	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCTGGATTGAAT	63	False	NA	13	True	AATAAA	-18	NA	29806595	29811164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29809539_29809765_29810076
transcript_36284.known	chr16	+	672	4	FSM	ENSG00000103495.15	ENST00000561855.1	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	458.281087931365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGTCCCTTGGTACAA	115	False	NA	NA	False	NA	NA	NA	29806647	29810266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29806894_29808229_29808294_29808569_29808742_29810076
transcript_36288.known	chr16	+	1464	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_2	211.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	240	False	NA	-26	True	NA	NA	NA	29808050	29811125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29808294_29808569_29808742_29810076
transcript_36289.known	chr16	+	599	5	FSM	ENSG00000103495.15	ENST00000568411.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	457.26872569639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGGCTCTGGATTGAA	88	False	NA	12	True	AATAAA	-17	NA	29807774	29811163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29807829_29808229_29808294_29808569_29808742_29810076_29810228_29811005
transcript_3629.nnic	chr1	-	1509	9	NNC	ENSG00000162373.13	novel	1693	6	NA	NA	-480852	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.2178224760139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCGTGTTTTCCTTGTG	7	True	NA	NA	False	AATAAA	-19	NA	49257821	48727866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48867190_48867231_49045583_49045801_49245769_49245865_49257723
transcript_36290.known	chr16	+	3002	2	FSM	ENSG00000167371.21	ENST00000300797.7	3002	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTCCAATCTCGGTT	-21	True	NA	6	True	AATAAA	-16	NA	29812240	29815880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29812352_29812989
transcript_36291.known	chr16	+	3874	3	FSM	ENSG00000280789.2	ENST00000320330.8	3874	3	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	1	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTGTGTCCTTGTT	5	True	NA	21	True	NA	NA	NA	29816151	29822489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29817008_29817209_29817293_29819554
transcript_36292.known	chr16	+	1593	4	FSM	ENSG00000103495.15	ENST00000568282.1	1593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	479.55627638706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACCCCATTACAATAAAT	8	True	NA	-23	True	NA	NA	NA	29808145	29811128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29808294_29808569_29808742_29809539_29809772_29810087
transcript_36293.known	chr16	-	1843	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_4	11.2960169971544	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGAGTGTGG	-18	True	NA	-13	True	AATAAA	-18	NA	29863226	29858356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_36296.known	chr16	+	729	6	FSM	ENSG00000214725.9	ENST00000565014.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.78885438199983	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGTTTCTCTGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	29863592	29868053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865355_29865443_29867863
transcript_36299.known	chr16	-	3843	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_13	69.7347421021643	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	7	True	NA	-11	True	AATAAA	-21	NA	29899550	29871158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_363.nic	chr1	-	666	5	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-173	13874	-173	-7840	5prime_fragment	FALSE	canonical	3	78	junction_1	9.93415824315276	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGAGCACGAACGTCG	6	True	NA	13	True	AAGAAA	-3	NA	1659185	1649611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_36301.known	chr16	-	3801	17	FSM	ENSG00000174938.15	ENST00000308713.9	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	78.8510264676371	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	10	True	NA	-11	True	AATAAA	-21	NA	29899547	29871158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_36303.known	chr16	-	3015	16	FSM	ENSG00000174938.15	ENST00000346932.9	3015	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	87.0510961064439	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	0	True	NA	-11	True	AATAAA	-21	NA	29899064	29871158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29896821_29897122_29897852_29897985_29898940
transcript_36307.nic	chr16	-	1332	8	ISM	ENSG00000174938.15	ENST00000346932.9	3015	16	21517	348	8472	-346	3prime_fragment	FALSE	canonical	3	229	junction_4	58.2794114239185	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCTCTTCTCAGTTGCC	NA	False	NA	0	True	AATAAA	-21	NA	29877547	29871506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270
transcript_36310.nic	chr16	-	1237	7	ISM	ENSG00000174938.15	ENST00000308713.9	3801	17	22056	348	8528	-346	3prime_fragment	FALSE	canonical	3	124	junction_3	91.3892772703669	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCTCTTCTCAGTTGCC	-10	True	NA	0	True	AATAAA	-21	NA	29877491	29871506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270
transcript_36317.known	chr16	+	1732	5	FSM	ENSG00000174939.11	ENST00000566693.1	1732	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	47.9374592568275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	20	False	NA	NA	False	AATAAA	-17	NA	29900857	29919864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
transcript_36318.known	chr16	+	775	4	FSM	ENSG00000174939.11	ENST00000563177.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	28.8905982400273	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTTGAAGGAAGGTGC	-2	True	NA	NA	False	GGGGCT	-33	NA	29900374	29905887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787
transcript_3632.known	chr1	-	1693	6	FSM	ENSG00000162373.13	ENST00000371833.4	1693	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	18.7552659272003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTCTTTATCCTCATTT	0	True	NA	1	True	AATAAA	-23	NA	48776891	48727518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48776605
transcript_36320.known	chr16	+	1115	4	FSM	ENSG00000174939.11	ENST00000483405.5	1115	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.4630711207319	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	2	True	NA	10	True	TATAAA	-19	NA	29900378	29906056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29900742_29901551_29901921_29904851_29904966_29905787
transcript_36321.known	chr16	+	1451	4	FSM	ENSG00000174939.11	ENST00000414952.6	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	45.5655815525515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGATATTAAATAAAAAT	20	False	NA	-13	True	AAAACA	-40	NA	29900857	29919632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29901921_29904851_29904966_29905787_29905960_29919530
transcript_36322.known	chr16	+	1816	3	FSM	ENSG00000174939.11	ENST00000308748.10	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	13	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	-3	True	NA	10	True	TATAAA	-19	NA	29900487	29906056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29901921_29904851_29904966_29905787
transcript_36324.known	chr16	+	1013	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	423.442243208366	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	31	False	NA	14	True	AATAAA	-16	NA	29962110	29973048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
transcript_36326.known	chr16	+	946	6	FSM	ENSG00000149932.17	ENST00000279396.11	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	276.530938594581	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	-1	True	NA	14	True	AATAAA	-16	NA	29962078	29973048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_3633.known	chr1	-	1465	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	24.1412510032103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTCGTGTTTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	48776932	48727869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
transcript_36331.known	chr16	+	1249	5	FSM	ENSG00000149932.17	ENST00000561899.6	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	304.19771531029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGGTTTTACTTAT	24	True	NA	-10	True	NA	NA	NA	29962103	29972005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407
transcript_36332.known	chr16	+	721	5	FSM	ENSG00000149932.17	ENST00000575829.6	721	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	409.506410206238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCCTTCTCTGCTGTG	7	True	NA	NA	False	NA	NA	NA	29962086	29971466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971410
transcript_36342.known	chr16	+	1412	8	FSM	ENSG00000169592.15	ENST00000562441.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	106.813589290609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCTGTATTAAAGGAGT	10	True	NA	-2	True	TTTAAA	-35	NA	29996245	30005762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30004567_30004658_30005220
transcript_36344.nic	chr16	+	1282	8	NIC	ENSG00000169592.15	novel	1926	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	90.3749558952104	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTGTCCTTTTT	442	False	NA	26	True	ATTAAA	-14	NA	29996201	30005790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30004567_30004658_30005220
transcript_36346.known	chr16	+	883	7	FSM	ENSG00000169592.15	ENST00000567065.5	883	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	86.5885866227953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGATGCCCCCCCCCACG	10	True	NA	NA	False	GGGGCT	-35	NA	29996245	30005323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30005220
transcript_36347.known	chr16	+	1154	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	41.4192655120242	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	5	True	NA	27	True	ATTAAA	-15	NA	29996240	30005791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
transcript_36349.known	chr16	+	880	7	FSM	ENSG00000169592.15	ENST00000567705.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	87.96479725183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAACATGCACGGGTGTC	14	True	NA	NA	False	NA	NA	NA	29996249	30005577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001464_30001531_30005220
transcript_36352.known	chr16	-	2560	7	FSM	ENSG00000149929.16	ENST00000279392.8	2560	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	25.1490004219297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTACTATTCAGTGGCCA	7	True	NA	-9	True	AATAAA	-20	NA	29995617	29992329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29993905_29994844_29995102_29995218_29995342_29995464_29995540
transcript_36355.known	chr16	+	515	6	FSM	ENSG00000169592.15	ENST00000620599.4	515	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	93.2450534881074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAGAGCAAAGCCCAG	-26	True	NA	NA	False	GGGGCT	-40	NA	29996209	30001229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211
transcript_36356.known	chr16	+	1489	6	FSM	ENSG00000169592.15	ENST00000304516.11	1489	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	78.131683714099	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTTAAAAGGGCAGCT	14	True	NA	-47	True	NA	NA	NA	29995714	30005717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30005220
transcript_3636.known	chr1	+	1653	7	FSM	ENSG00000162374.18	ENST00000448907.7	1653	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.6718699236469	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAATAATA	NA	False	NA	NA	False	AAGAAA	-4	NA	50048013	50201570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_50048183_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_36361.known	chr16	-	988	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	47.9249413145181	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	-19	True	NA	-1	True	AATAAA	-27	NA	29995643	29992989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
transcript_36371.known	chr16	-	2065	12	FSM	ENSG00000149927.18	ENST00000616445.4	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.9451539310318	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGACTCGTGTGTGCT	1	True	NA	-7	True	AATAAA	-12	NA	30011421	30005515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902_30010990_30011329
transcript_36372.known	chr16	+	2323	14	FSM	ENSG00000285043.3	ENST00000338110.11	2323	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	3406.02539887058	2406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-21	True	NA	22	True	AATAAA	-18	NA	30053150	30070414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30053218_30053463_30053500_30054783_30054928_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_36377.known	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	2977.48801658191	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-2	True	NA	22	True	AATAAA	-18	NA	30065759	30070414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_36379.known	chr16	+	1550	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_1	1942.36762338518	1836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	62	False	NA	22	True	AATAAA	-18	NA	30064273	30070414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_36380.known	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	2362.91697047844	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	27	False	NA	19	True	AATAAA	-15	NA	30064496	30070411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_36386.known	chr16	+	1486	9	FSM	ENSG00000149925.22	ENST00000643777.4	1486	9	0	0	0	0	multi-exon	FALSE	canonical	3	5055	junction_1	745.047219560613	6608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-2	True	NA	22	True	AATAAA	-18	NA	30065759	30070414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_36388.known	chr16	+	1447	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	0	0	0	0	multi-exon	TRUE	canonical	2	289	junction_5	2311.14753693917	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	15	False	NA	-12	True	NA	NA	NA	30065776	30070380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_3639.known	chr1	-	6821	19	FSM	ENSG00000185104.21	ENST00000396153.7	6821	19	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_9	30.3795435559303	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTCTATAAACTCT	0	True	NA	NA	False	AATAAA	-17	NA	50960267	50437027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_50441524_50475463_50475680_50490587_50490666_50491720_50491802_50535368_50535458_50539591_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50655441_50655529_50705785_50705892_50738862_50738955_50744683_50744776_50787999_50788206_50801630_50801678_50857928_50857998_50959766
transcript_36393.known	chr16	+	1499	8	FSM	ENSG00000149925.22	ENST00000569798.5	1499	8	0	0	0	0	multi-exon	FALSE	canonical	3	5055	junction_1	763.446962994891	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGCTAAGTCCATCAC	10	False	NA	-40	True	NA	NA	NA	30065771	30070352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829
transcript_3640.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_17	9.96776812451429	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-3	True	NA	1	True	NA	NA	NA	51345116	51287257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
transcript_36405.known	chr16	+	801	4	FSM	ENSG00000149925.22	ENST00000566130.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	6801	junction_2	265.870060158885	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	355	False	NA	22	True	AATAAA	-18	NA	30069261	30070414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30069390_30069498_30069674_30069829_30070030_30070116
transcript_36407.nic	chr16	+	1425	9	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	616	junction_1	851.396637516851	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	-27	True	NA	10	True	AATAAA	-15	NA	30075976	30085376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_36408.nic	chr16	+	1455	9	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_2	1016.76813359782	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	-4	True	NA	10	True	AATAAA	-15	NA	30075999	30085376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_30076095_30076314_30076476_30081199_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_36410.known	chr16	+	1402	9	FSM	ENSG00000149923.14	ENST00000279387.12	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	343.816970748973	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	-10	True	NA	10	True	AATAAA	-15	NA	30075993	30085376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_36411.known	chr16	+	1490	9	FSM	ENSG00000149923.14	ENST00000566749.5	1490	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	1055.44515934036	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTTGGGTTTGTGCC	13	True	NA	5	True	AATAAA	-10	NA	30076016	30085371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082964_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_36417.nic	chr16	+	1373	8	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	231	junction_2	1251.71102487592	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	-27	True	NA	10	True	AATAAA	-15	NA	30075976	30085376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_30076101_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_36419.known	chr16	+	1447	8	FSM	ENSG00000149923.14	ENST00000563200.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	367.517540883619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCTAATAAAAGAAG	3	True	NA	-19	True	GATAAA	-21	NA	30076006	30085347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083782_30084665_30084856_30084932
transcript_36422.known	chr16	+	941	8	FSM	ENSG00000149923.14	ENST00000562664.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	922.03740682894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGACTACTTCCTGTG	14	True	NA	NA	False	NA	NA	NA	30076017	30085041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_36423.known	chr16	+	1301	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1035.68969428934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	19	True	NA	-10	True	GATAAA	-30	NA	30076022	30085356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_36429.known	chr16	+	846	7	FSM	ENSG00000149923.14	ENST00000563732.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1099.80250752376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGGAAGGTTACAAG	-26	True	NA	NA	False	NA	NA	NA	30075977	30084779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665
transcript_3643.known	chr1	-	5163	25	FSM	ENSG00000085832.17	ENST00000371733.8	5163	25	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_16	25.1553161489884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-8	True	NA	-9	True	AATAAA	-20	NA	51519266	51354262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51448045_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_36435.known	chr16	-	1796	8	FSM	ENSG00000149922.12	ENST00000279386.6	1796	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	1.88441513689613	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGGCTCCTGTGTT	5012	False	NA	-3	True	AATAAA	-25	NA	30091249	30085795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075
transcript_3644.known	chr1	-	1773	9	FSM	ENSG00000085832.17	ENST00000371727.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.7528139059899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13	True	NA	NA	False	NA	NA	NA	51519245	51457535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51458734_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_36440.known	chr16	-	730	5	FSM	ENSG00000090238.12	ENST00000563788.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	147.117937383584	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCATGCACTGTGA	NA	False	NA	NA	False	NA	NA	NA	30096915	30092576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096744
transcript_36443.known	chr16	+	1650	2	FSM	ENSG00000250616.3	ENST00000515455.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	NA	False	NA	30	True	AGTAAA	-18	NA	30096429	30104116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30097420_30103456
transcript_36446.nic	chr16	-	1876	10	NIC	ENSG00000102882.12	novel	1787	9	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	134.790372224593	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	-23	True	NA	-5	True	TATAAA	-24	NA	30123258	30114104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_30114709_30115594_30115646_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_36448.nic	chr16	-	1709	9	NIC	ENSG00000102882.12	novel	1787	9	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	115.647024929308	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	206	False	NA	-5	True	TATAAA	-24	NA	30123029	30114104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30122926
transcript_36449.known	chr16	-	1787	9	FSM	ENSG00000102882.12	ENST00000263025.9	1787	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	31.6336450634447	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	15	True	NA	-5	True	TATAAA	-24	NA	30123220	30114104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_36451.known	chr16	-	1743	8	FSM	ENSG00000102882.12	ENST00000322266.9	1743	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	114.457549389478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	NA	False	NA	-6	True	TATAAA	-23	NA	30123309	30114105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_36452.known	chr16	-	2567	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	33.3582899772168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-1	True	NA	-6	True	TATAAA	-23	NA	30122968	30114105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
transcript_36454.known	chr16	+	1623	11	FSM	ENSG00000102879.16	ENST00000219150.10	1623	11	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_7	10.9178752511649	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAGACTCTGATGACT	-13	True	NA	NA	False	AATAAA	-20	NA	30183601	30189076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_36457.known	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	78.0418516710419	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	0	True	NA	7	True	AATAAA	-18	NA	30199254	30204310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_36461.known	chr16	+	762	5	FSM	ENSG00000132207.18	ENST00000345535.8	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	399.835903840563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	11	False	NA	NA	False	AATAAA	-14	NA	30193903	30197561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30194273_30194739_30194792_30196973_30197102_30197269_30197358_30197436
transcript_36465.known	chr16	-	335	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	1140.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	0	True	NA	NA	False	ATTAAA	-15	NA	30193666	30192933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193075_30193357_30193418_30193532
transcript_36466.known	chr16	-	1012	3	FSM	ENSG00000169627.9	ENST00000305321.4	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	122	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	62	False	NA	NA	False	ATTAAA	-14	NA	30194306	30192934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193075_30193357_30193456_30193532
transcript_36467.known	chr16	-	687	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	2651	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	-5	True	NA	NA	False	ATTAAA	-15	NA	30193697	30192933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193456_30193532
transcript_36468.known	chr16	-	307	2	FSM	ENSG00000169627.9	ENST00000565525.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	844	False	NA	NA	False	ATTAAA	-14	NA	30193524	30192934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30193075_30193357
transcript_36469.known	chr16	+	1133	6	FSM	ENSG00000132207.18	ENST00000251303.11	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_2	122.025571090653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	4	False	NA	NA	False	AATAAA	-14	NA	30193874	30197561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30194273_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
transcript_3647.known	chr1	+	3660	24	FSM	ENSG00000117859.19	ENST00000428468.6	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	183.922766728274	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTGCAGTTTATTTAT	3	True	NA	6	True	CATAAA	-44	NA	51617091	51789219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36473.known	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_6	36.052816194516	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-34	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
transcript_36475.nnic	chr16	-	1369	7	NNC	ENSG00000169217.9	novel	3361	7	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	196.670338948765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTTGGCTGTGCTG	143	False	NA	-33	True	AATAAA	-17	NA	30355216	30352846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355037
transcript_36478.nic	chr16	+	603	5	ISM	ENSG00000180209.12	ENST00000322861.12	657	7	1245	0	227	0	3prime_fragment	FALSE	canonical	3	12	junction_3	4.52769256906871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	-15	True	NA	18	True	AATAAA	-24	NA	30376046	30377991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_36479.known	chr16	+	657	7	FSM	ENSG00000180209.12	ENST00000322861.12	657	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.34846922834953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	0	True	NA	18	True	AATAAA	-24	NA	30374801	30377991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30374861_30375819_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_36483.known	chr16	-	878	3	FSM	ENSG00000179958.10	ENST00000568973.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCAGGGGTGCCTCTGA	210	False	NA	48	True	NA	NA	NA	30429800	30423978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429588
transcript_36484.known	chr16	-	1024	3	FSM	ENSG00000179958.10	ENST00000678016.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	186	False	NA	-17	True	AATAAA	-20	NA	30429824	30423697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429747
transcript_36485.known	chr16	-	1181	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_2	13	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGTTATTACCTGTTT	-20	True	NA	-3	True	AGTAAA	-22	NA	30430030	30423614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429879
transcript_36486.known	chr16	-	801	2	FSM	ENSG00000179958.10	ENST00000567983.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	-20	True	NA	-17	True	AATAAA	-20	NA	30430030	30423697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424424_30429955
transcript_36487.known	chr16	-	749	3	FSM	ENSG00000179958.10	ENST00000565758.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	569	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTATTCCTGGATGGC	18	True	NA	-7	True	AGTAAA	-21	NA	30429992	30424033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30424534_30429056_30429168_30429854
transcript_36488.known	chr16	-	2244	1	FSM	ENSG00000179918.19	ENST00000478753.5	2244	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTAATGTTTGGTGG	-1	True	NA	-1	True	AATAAA	-26	NA	30445874	30443630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30443600_30445900
transcript_36489.known	chr16	-	1511	3	FSM	ENSG00000169955.8	ENST00000568028.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTTTGCTGAGGCAG	6169	False	NA	NA	False	NA	NA	NA	30535004	30532305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30533149_30534196_30534311_30534450
transcript_3649.known	chr1	+	3352	26	FSM	ENSG00000117859.19	ENST00000371714.5	3352	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	238.770403526065	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	10	False	NA	20	True	CATAAA	-29	NA	51577178	51788469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51577257_51598123_51598194_51614304_51614420_51616873_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36492.known	chr16	+	1153	2	FSM	ENSG00000235560.4	ENST00000664247.1	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTTCCACTTCATTG	-15	True	NA	NA	False	GATAAA	-21	NA	30535048	30537149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30535481_30536428
transcript_36493.known	chr16	-	1999	2	FSM	ENSG00000169957.10	ENST00000562803.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGGTGGGGAGTG	8144	False	NA	NA	False	NA	NA	NA	30526821	30524132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30526052_30526741
transcript_36494.nnic	chr16	-	1185	3	NNC	ENSG00000229809.9	novel	1106	3	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	11.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGAGTGA	785	False	NA	29	True	NA	NA	NA	30571612	30569685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_30570437_30571009_30571124_30571292
transcript_36495.known	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	5	True	NA	-11	True	AATAGA	-17	NA	30571714	30569725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30570437_30571009_30571124_30571433
transcript_36496.known	chr16	+	1488	2	FSM	ENSG00000239791.2	ENST00000492040.1	1488	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCGTGGTGGCCCAT	12	False	NA	NA	False	AATAAA	-13	NA	30572254	30583860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30572412_30582529
transcript_36498.known	chr16	+	2078	12	FSM	ENSG00000156858.12	ENST00000300835.9	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	15.9570705072565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	-22	True	NA	28	True	AGTAAA	-20	NA	30650959	30656413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_36499.known	chr16	+	2316	11	FSM	ENSG00000156858.12	ENST00000542965.2	2316	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	8.24681756800767	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	137	False	NA	28	True	AGTAAA	-20	NA	30651189	30656413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_36503.known	chr16	+	5309	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.1539305399106	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	-1	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_36508.known	chr16	+	1536	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	72.1202699199978	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	25	True	NA	-12	True	NA	NA	NA	30748439	30757331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
transcript_36509.known	chr16	+	5384	10	FSM	ENSG00000156873.16	ENST00000563588.6	5384	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	26.3227826965328	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTCTTCACACTCA	10	True	NA	NA	False	AATAAA	-22	NA	30748424	30761176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_3651.known	chr1	+	2831	23	FSM	ENSG00000117859.19	ENST00000495776.5	2831	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	186.689714732164	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	3	True	NA	20	True	CATAAA	-29	NA	51617091	51788469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51617222_51651990_51652042_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36521.known	chr16	+	1791	9	FSM	ENSG00000156873.16	ENST00000563913.5	1791	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	27.7297223210042	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAATCTGCTACAC	28	True	NA	-9	True	NA	NA	NA	30748442	30757334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_36530.known	chr16	-	1142	2	FSM	ENSG00000261840.4	ENST00000568500.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACACTACTTGGTGCCTT	-1	True	NA	-9	True	AATAAA	-17	NA	30699058	30697712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30697932_30698135
transcript_36531.known	chr16	-	306	2	FSM	ENSG00000261840.4	ENST00000564775.3	348	2	41	1	41	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGGTGCCTTGATTAT	96	False	NA	-3	True	AATAAA	-23	NA	30698961	30697706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30697932_30698880
transcript_36532.known	chr16	-	6083	3	FSM	ENSG00000102870.6	ENST00000262525.6	6083	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-13	True	NA	-7	True	AATAAA	-15	NA	30787205	30778455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30784255_30784409_30784516_30787027
transcript_36533.known	chr16	-	857	6	FSM	ENSG00000099385.12	ENST00000215115.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	47.50999894759	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	-29	True	NA	-2	True	AATAAA	-14	NA	30894077	30887794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_36534.known	chr16	+	1284	2	FSM	ENSG00000260083.3	ENST00000662645.2	1361	2	77	0	77	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	10	True	NA	16	True	AATAAA	-22	NA	30875538	30895220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30876119_30894516
transcript_36535.known	chr16	+	1375	2	FSM	ENSG00000260083.3	ENST00000663816.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAATGAGTGTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	30875407	30895211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30876119_30894547
transcript_36536.known	chr16	+	925	1	FSM	ENSG00000260083.3	ENST00000658747.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	5399	False	NA	16	True	AATAAA	-22	NA	30894295	30895220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30894300_30895200
transcript_36537.known	chr16	+	2204	2	FSM	ENSG00000175938.7	ENST00000318663.5	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGTTGCTGTGAAGG	-23	True	NA	7	True	AATAAA	-15	NA	30949067	30954938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30949518_30953184
transcript_36538.known	chr16	+	2171	7	FSM	ENSG00000099377.14	ENST00000297679.10	2171	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.57436097443867	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	-3	True	NA	23	True	ATTAAA	-15	NA	30985206	30989147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_30985298_30985652_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_36539.nnic	chr16	+	2354	7	NNC	ENSG00000099377.14	novel	2171	7	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.5114897006935	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	-17	True	NA	23	True	ATTAAA	-15	NA	30985192	30989147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_30985298_30985483_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_36541.known	chr16	-	4674	10	FSM	ENSG00000099365.11	ENST00000215095.11	4674	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.73755680118397	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCGTGTGCTCACTTCC	23	True	NA	-1	True	NA	NA	NA	31010638	30989255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_30992902_30993129_30993241_30993346_30993485_30996682_30996757_30996950_30997060_30997501_30997576_31000927_31001003_31001093_31001194_31001528_31001604_31010366
transcript_36544.nic	chr16	+	1456	11	NIC	ENSG00000103496.15	novel	1410	11	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	61.2277714766755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCCTGTGCACGTGT	-30	True	NA	8	True	ATTAAA	-18	NA	31033532	31040163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_36545.known	chr16	+	1410	11	FSM	ENSG00000103496.15	ENST00000313843.8	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	16.9422548676379	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	-5	True	NA	9	True	ATTAAA	-19	NA	31033557	31040164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_36551.nic	chr16	+	1567	10	NIC	ENSG00000103496.15	novel	1410	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	194	junction_6	14.7631506557357	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCCTGTGCACGTGT	-27	True	NA	8	True	ATTAAA	-18	NA	31033535	31040163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_31033836_31034012_31034115_31034225_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_36557.known	chr16	+	649	4	FSM	ENSG00000103496.15	ENST00000613541.1	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	26.4701089281224	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	16	False	NA	6	True	AATAAA	-18	NA	31033804	31034877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461
transcript_36558.known	chr16	+	1002	3	FSM	ENSG00000103496.15	ENST00000461455.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	20.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	25	True	NA	6	True	AATAAA	-18	NA	31033587	31034877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034225
transcript_36559.known	chr16	+	846	4	FSM	ENSG00000103496.15	ENST00000565483.1	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	97.3801257387199	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTACTTTCTCCT	43	True	NA	-18	True	NA	NA	NA	31033605	31034853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461
transcript_36560.known	chr16	-	2685	3	FSM	ENSG00000167394.13	ENST00000300849.5	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	4.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTCTGTGTTCTGG	-16	True	NA	-5	True	ATTAAA	-19	NA	31074240	31060846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31062281_31063812_31064482_31073658
transcript_36561.nnic	chr16	-	1055	4	NNC	ENSG00000167397.15	novel	1077	4	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	330.458603895993	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	26	True	NA	-1	True	AATAAA	-30	NA	31094916	31090841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_31091343_31092782_31092867_31093311_31093422_31094556
transcript_36563.known	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_2	41.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-32	True	NA	-13	True	AATAAA	-18	NA	31094797	31090853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31093311_31093422_31094556
transcript_36564.known	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	391	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	5	True	NA	-1	True	AATAAA	-30	NA	31094760	31090841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31093311_31093483_31094556
transcript_36565.known	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-14	True	NA	-1	True	AATAAA	-30	NA	31094956	31090841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31094556
transcript_36566.known	chr16	-	1077	4	FSM	ENSG00000167397.15	ENST00000319788.11	1077	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	333.103587491939	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	2	True	NA	-1	True	AATAAA	-30	NA	31094940	31090841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31091343_31092782_31092865_31093311_31093422_31094556
transcript_36567.known	chr16	+	2036	12	FSM	ENSG00000103507.14	ENST00000219794.11	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_11	63.5270489666663	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCCGGGTCCCAG	-25	True	NA	15	True	NA	NA	NA	31108385	31112791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112120
transcript_36569.known	chr16	+	1997	11	FSM	ENSG00000103507.14	ENST00000394950.7	1997	11	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	31.736571963588	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGGCCCCGTGTGTGGG	NA	False	NA	28	True	ATTAAA	-20	NA	31108293	31112567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868
transcript_3657.known	chr1	+	2210	21	FSM	ENSG00000117859.19	ENST00000531828.5	2210	21	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_6	117.471475261018	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAAGATGCAAAGTTTA	2652	False	NA	NA	False	NA	NA	NA	51729807	51787789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36574.known	chr16	+	392	1	FSM	ENSG00000278133.1	ENST00000613584.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTTTTTGTAGTTCTT	5615	False	NA	NA	False	AATAAA	-19	NA	31123672	31124064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31123700_31124100
transcript_36577.known	chr16	-	1837	6	FSM	ENSG00000052344.16	ENST00000317508.11	1837	6	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_1	28.3083026690051	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	-9	True	NA	-17	True	ATTAAA	-15	NA	31135727	31131432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135153_31135172_31135413
transcript_36582.nnic	chr16	-	1114	3	NIC	ENSG00000178226.11	novel	2811	15	NA	NA	635	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGTGTGGCCTTGTGG	7966	False	NA	-2	True	AATAAA	-14	NA	31142223	31138925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_31139417_31140293_31140416_31141722
transcript_366.nic	chr1	-	740	4	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-272	16700	-272	-10666	5prime_fragment	FALSE	canonical	3	83	junction_3	8.05536398239638	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAAGCATTTACTTTCT	NA	False	NA	23	True	NA	NA	NA	1659284	1652437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1652567_1655368_1655485_1657374_1657499_1658913
transcript_3660.nic	chr1	+	2699	21	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	-3	-66	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	133.555456646294	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGTTTAATTAATTATT	2649	False	NA	14	True	ATTAAA	-18	NA	51729804	51788398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_3661.nic	chr1	+	2770	21	NIC	ENSG00000117859.19	novel	2721	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	133.555456646294	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	2649	False	NA	20	True	CATAAA	-29	NA	51729804	51788469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36622.known	chr16	+	1785	15	FSM	ENSG00000089280.19	ENST00000568685.1	1785	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	640.780773744032	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCATTAAAAGTGACCAT	12	False	NA	1	True	NA	NA	NA	31180150	31191575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189119_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_36634.known	chr16	+	1818	15	FSM	ENSG00000089280.19	ENST00000380244.7	1818	15	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_3	510.220465553262	4343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	0	True	NA	28	True	ATTAAA	-17	NA	31180138	31191602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183860_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_3664.known	chr1	+	2755	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	110.341323882907	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	27	False	NA	20	True	CATAAA	-29	NA	51729903	51788469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36641.known	chr16	+	1787	14	FSM	ENSG00000089280.19	ENST00000566605.5	1787	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	665.017942543903	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	-1	True	NA	28	True	ATTAAA	-17	NA	31180137	31191602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_36654.known	chr16	+	4920	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_3	443.552225097439	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	11	False	NA	28	True	ATTAAA	-17	NA	31180149	31191602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_3668.known	chr1	+	2721	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	128.759368860103	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	2659	False	NA	20	True	CATAAA	-29	NA	51729814	51788469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36693.known	chr16	+	952	3	FSM	ENSG00000089280.19	ENST00000487045.6	952	3	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	39	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGACTCTTCTTA	0	True	NA	NA	False	NA	NA	NA	31180138	31183350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31180228_31182397_31182423_31182512
transcript_36694.known	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	5.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-9	True	NA	-13	True	AATATA	-18	NA	31202760	31201485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31201842_31202146_31202204_31202416
transcript_36695.known	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-5	True	NA	-13	True	AATATA	-18	NA	31202756	31201485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31201842_31202416
transcript_36696.known	chr16	-	589	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGCGCGCACACGT	-1	False	NA	-4	True	AATAAA	-19	NA	31217135	31215961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31216158_31216742
transcript_36697.known	chr16	-	372	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGGCTCTGTGGGGAG	-14	True	NA	1	True	AATAAA	-16	NA	31428360	31427730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31427858_31428014_31428152_31428252
transcript_36698.known	chr16	+	1805	11	FSM	ENSG00000140682.19	ENST00000394863.8	1805	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.40337760755184	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	-7	True	NA	6	True	CATAAA	-18	NA	31472151	31477958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_367.nic	chr1	-	399	4	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	11	16758	3	-10724	5prime_fragment	FALSE	canonical	3	83	junction_3	8.05536398239638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGATGAAAAGAGAAAA	-14	True	NA	-35	True	AAAAAG	-10	NA	1659001	1652495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1652567_1655368_1655485_1657374_1657499_1658913
transcript_36700.nic	chr16	+	1346	7	ISM	ENSG00000140682.19	ENST00000569703.5	1005	8	-36	949	-2	580	5prime_fragment	FALSE	canonical	3	12	junction_1	7.86694914747063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTATGTTATTATTGT	-20	True	NA	20	True	AATAAA	-29	NA	31472138	31475339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562
transcript_36701.known	chr16	+	1803	11	FSM	ENSG00000140682.19	ENST00000394858.6	1803	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.1039596198718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCTGTCTCTGAATG	27	False	NA	8	True	CATAAA	-20	NA	31473204	31477960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31473251_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_36702.known	chr16	-	2785	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	13.3624681685516	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTGCAGCTGGACCC	-2	True	NA	-10	True	AATAAA	-31	NA	31508391	31489474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_3671.known	chr1	+	2529	19	FSM	ENSG00000117859.19	ENST00000486942.5	2529	19	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	163.146680953591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	157	False	NA	20	True	CATAAA	-29	NA	51730033	51788469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_51730125_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_36712.known	chr16	+	660	4	FSM	ENSG00000140675.13	ENST00000568891.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	2.94392028877595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCTGGTTTTGTGGA	3541	False	NA	NA	False	NA	NA	NA	31488209	31490344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31488491_31489122_31489339_31490103_31490231_31490308
transcript_36713.nic	chr16	+	668	3	ISM	ENSG00000140675.13	ENST00000419665.6	1852	12	4892	1151	-10	-826	internal_fragment	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGGAGGCTTGATGTT	3341	False	NA	NA	False	AATACA	-15	NA	31488009	31489518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_31488174_31488382_31488491_31489122
transcript_36714.known	chr16	+	655	2	FSM	ENSG00000260625.3	ENST00000569782.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGATCCCCACAGTTT	-11	True	NA	NA	False	AATAAA	-25	NA	31508470	31509256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31509037_31509167
transcript_36715.known	chr16	+	488	3	FSM	ENSG00000169877.10	ENST00000302312.9	488	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	-1	True	NA	8	True	AATAAA	-23	NA	31527899	31528803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31527963_31528135_31528215_31528457
transcript_36719.known	chr16	+	1812	9	FSM	ENSG00000131797.13	ENST00000254109.10	1844	9	32	0	4	0	multi-exon	TRUE	canonical	1	2	junction_1	6.63207169744115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	-11	True	NA	NA	False	NA	NA	NA	31700589	31707437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31700739_31701662_31701859_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_36722.known	chr16	+	1571	8	FSM	ENSG00000131797.13	ENST00000693004.1	1643	8	72	0	5	0	multi-exon	FALSE	canonical	2	5	junction_1	5.71785602748272	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	34	True	NA	NA	False	NA	NA	NA	31700634	31707437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31700739_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_36724.known	chr16	+	1449	7	FSM	ENSG00000131797.13	ENST00000686087.1	1777	7	36	292	1	-15	multi-exon	FALSE	canonical	2	5	junction_1	5.5502752684489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	-6	True	NA	NA	False	NA	NA	NA	31700594	31707422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31700739_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_36731.known	chr16	+	518	5	FSM	ENSG00000197302.11	ENST00000529515.2	5982	5	62	5402	3	-52	multi-exon	FALSE	canonical	3	39	junction_4	29.5338788512447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGCCAAGGCATAAGC	2	True	NA	NA	False	AATAAA	-11	NA	31713305	31754484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31754454
transcript_36732.known	chr16	+	2769	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-10	0	2	0	multi-exon	FALSE	canonical	3	74	junction_4	17.4839211849059	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	-30	True	NA	5	True	AATAAA	-14	NA	31713233	31761565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
transcript_36733.nic	chr16	+	1048	5	NIC	ENSG00000197302.11	novel	2759	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	38.3210125127194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGTATGTAATGTGG	-20	True	NA	-36	True	AAAAAG	-12	NA	31713243	31759841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765_31753901_31759356
transcript_36734.known	chr16	+	1670	5	FSM	ENSG00000197302.11	ENST00000531864.6	1670	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	9.63068014212911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTATAATTAACTTTCA	-17	True	NA	NA	False	TTTAAA	-11	NA	31713246	31794869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31753765_31753901_31792629_31792731_31793334_31793412_31793701
transcript_36739.known	chr16	+	639	3	FSM	ENSG00000197302.11	ENST00000533488.6	639	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTAAAGAATGTGACAA	9	True	NA	NA	False	AAGAAA	-35	NA	31713272	31754795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31753765_31753901_31754454
transcript_36740.known	chr16	+	481	3	FSM	ENSG00000197302.11	ENST00000542684.5	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAATTAAATGGG	23	True	NA	NA	False	NA	NA	NA	31713286	31759553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713436_31753765_31753901_31759356
transcript_36743.known	chr16	+	837	3	FSM	ENSG00000197302.11	ENST00000539915.5	837	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGTATGTAATGTGG	-32	True	NA	-36	True	AAAAAG	-12	NA	31713231	31759841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31713449_31753765_31753901_31759356
transcript_36744.known	chr16	+	680	5	FSM	ENSG00000185947.15	ENST00000394846.7	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	33.0189339621981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAACTTTGATCAATATA	-2	True	NA	NA	False	NA	NA	NA	31873806	31914725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31890206_31890251_31914475
transcript_36745.known	chr16	+	3268	4	FSM	ENSG00000185947.15	ENST00000300870.15	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	27.7408643620842	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAATTACTTCAATT	-2	True	NA	77	True	ATTAAA	-20	NA	31873806	31917357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475
transcript_36747.known	chr16	-	5177	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_8	16.2685791225499	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGTAATATATCAATGC	-29	True	NA	72	True	AATATA	-17	NA	46621379	46578590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_36754.known	chr16	-	530	2	FSM	ENSG00000171241.9	ENST00000564272.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATGGCATCGCTTAT	-1	True	NA	NA	False	AATAAA	-27	NA	46621351	46620465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46620901_46621256
transcript_36755.known	chr16	-	6776	17	FSM	ENSG00000069329.18	ENST00000299138.12	6776	17	0	0	0	0	multi-exon	TRUE	canonical	3	528	junction_3	61.7636624561724	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGGAGAAAGAAAAAAA	3	True	NA	NA	False	NA	NA	NA	46689178	46656131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46689130
transcript_36770.known	chr16	+	1615	7	FSM	ENSG00000091651.9	ENST00000219097.7	1615	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	35.3761532988286	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	-12	True	NA	27	True	AATAAA	-18	NA	46689658	46698394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_36771.nic	chr16	+	1709	7	NIC	ENSG00000091651.9	novel	1615	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	172.922349304215	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	5	False	NA	27	True	AATAAA	-18	NA	46689623	46698394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_46689830_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_36775.known	chr16	+	888	6	FSM	ENSG00000091651.9	ENST00000568364.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	186.678975784634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAATTGGAGGCCGG	26	True	NA	NA	False	NA	NA	NA	46689696	46697818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46696016_46696086_46697457
transcript_36776.known	chr16	+	1833	4	FSM	ENSG00000091651.9	ENST00000569239.5	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	34.7786652353933	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGGCCGGGCGGGGGG	-12	True	NA	NA	False	GGGGCT	-29	NA	46689658	46694519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092
transcript_36782.known	chr16	-	6845	4	FSM	ENSG00000155330.10	ENST00000285697.9	6845	4	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_1	43.0426145426444	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATACTTACCAT	-17	True	NA	NA	False	AGTAAA	-18	NA	46831180	46796602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46803071_46809602_46809786_46824385_46824483_46831083
transcript_36783.known	chr16	-	6640	3	FSM	ENSG00000155330.10	ENST00000394806.6	6640	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	133.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTATCATGTATACTTA	1	True	NA	NA	False	AGTAAA	-14	NA	46831162	46796606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46803071_46824385_46824483_46831083
transcript_36790.known	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_7	43.6348484585429	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-3	True	NA	-9	True	AATAAA	-17	NA	46973674	46955361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
transcript_36796.known	chr16	+	516	2	FSM	ENSG00000261173.1	ENST00000562536.1	516	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAGCCACTGTAGC	61	False	NA	14	True	AATAAA	-22	NA	46973988	46978983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_46974126_46978604
transcript_36798.known	chr16	-	3185	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_13	43.3152122522417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCAGTGAGTTT	11	True	NA	NA	False	AATAAA	-16	NA	47461063	47154390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_368.known	chr1	-	5948	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	20.1645573965808	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTGTTTTCTTCCTT	93	False	NA	-2	True	AATAAA	-13	NA	1692728	1661478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_36801.nic	chr16	-	2204	14	ISM	ENSG00000129636.13	ENST00000320640.11	3185	18	-7	63751	-7	42518	5prime_fragment	FALSE	canonical	3	338	junction_9	46.2374883124482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAACTCATTATATGGA	4	True	NA	NA	False	AAAAAG	-6	NA	47461070	47218141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_36803.nic	chr16	-	856	8	ISM	ENSG00000129636.13	ENST00000320640.11	3185	18	-7	211368	-7	-188	5prime_fragment	FALSE	canonical	3	338	junction_3	47.5325881766974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGCCTTTCCAATTCT	4	True	NA	NA	False	AAAAAG	-1	NA	47461070	47365758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_36806.nic	chr16	+	4063	32	NIC	ENSG00000102893.16	novel	3829	32	NA	NA	4	255	combination_of_known_junctions	FALSE	canonical	3	120	junction_1	24.5647226390828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTTTGAGCTCCTGC	1	True	NA	23	True	AATAAA	-17	NA	47461298	47700000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_36808.known	chr16	+	3829	32	FSM	ENSG00000102893.16	ENST00000566044.5	3829	32	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	33.1788267927984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	-3	True	NA	13	True	AATAAA	-16	NA	47461294	47699745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_47461427_47463881_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_36810.known	chr16	+	5464	31	FSM	ENSG00000102893.16	ENST00000299167.12	5464	31	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	40.3393383959408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGCCAATGCCTGTTTT	-6	True	NA	5	True	AGTAAA	-19	NA	47461325	47701523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_47461427_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_36812.known	chr16	-	1325	2	FSM	ENSG00000261325.2	ENST00000570024.2	1330	2	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTCTCTGGGTCTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	47887130	47849313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_47849949_47886440
transcript_36813.known	chr16	+	8195	15	FSM	ENSG00000102910.14	ENST00000285737.9	8195	15	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_6	17.6844506818382	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGTTAGGATCATA	-47	True	NA	NA	False	GATAAA	-18	NA	48244299	48357349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48244622_48252130_48252366_48256609_48256742_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_36815.known	chr16	+	2580	14	FSM	ENSG00000102910.14	ENST00000535754.5	2580	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	39.1886651889286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTTTATAAACATAATC	-14	True	NA	-81	True	NA	NA	NA	48244332	48351899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48244622_48252130_48252366_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_36817.known	chr16	-	2415	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	NA	False	NA	-23	True	ATTAAA	-25	NA	48365901	48360530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_48362431_48365386
transcript_36818.known	chr16	-	2110	2	FSM	ENSG00000196470.12	ENST00000394725.3	2110	2	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-2	True	NA	-23	True	ATTAAA	-25	NA	48385413	48360530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_48362431_48385203
transcript_36819.known	chr16	+	2237	4	FSM	ENSG00000260086.4	ENST00000568150.4	2244	4	7	0	7	0	multi-exon	FALSE	canonical	2	7	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGACAAA	1929	False	NA	NA	False	GATAAA	-37	NA	48623421	48746318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48623604_48741282_48741403_48744246_48744330_48744466
transcript_36821.nnic	chr16	+	762	2	FSM	ENSG00000260086.4	ENST00000686696.1	750	2	-13	1	6	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGCGACATTTGCTT	1928	False	NA	NA	False	AATAAA	-16	NA	48623420	48676972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_48623604_48676393
transcript_36824.known	chr16	-	615	1	FSM	ENSG00000275155.1	ENST00000615979.1	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTGCACTGAATTTT	9600	False	NA	0	True	AATAAA	-18	NA	49847632	49847017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_49847000_49847600
transcript_36826.known	chr16	+	2965	7	FSM	ENSG00000205423.12	ENST00000458059.7	2965	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	94.6337971105226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTTTTCTTTATTGT	NA	False	NA	16	True	AATAAA	-22	NA	50024409	50037088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_36827.known	chr16	+	2092	6	FSM	ENSG00000205423.12	ENST00000427478.7	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	26.6953179415417	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGATTGGACTTTTTCT	-17	True	NA	9	True	AATAAA	-15	NA	50025224	50037081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_36828.known	chr16	+	1992	5	FSM	ENSG00000205423.12	ENST00000568890.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	95.1774658204346	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGACTTTTTCTTTAT	13	True	NA	13	True	AATAAA	-19	NA	50025254	50037085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50025341_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_36829.known	chr16	-	2145	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	102.880923280266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAATGTGCTTGGGGC	271	False	NA	-29	True	AATAAA	-21	NA	50368779	50319029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_3683.known	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	306.10881790376	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-1	True	NA	-3	True	AATAAA	-45	NA	51878805	51789190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
transcript_36832.known	chr16	-	5424	17	FSM	ENSG00000166164.16	ENST00000394688.8	5424	17	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_14	53.9432210175662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGAGAGGGAGTCT	-16	True	NA	NA	False	NA	NA	NA	50368988	50315956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320775_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_36833.known	chr16	+	1579	4	FSM	ENSG00000121281.13	ENST00000568930.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTCCAGGCCAGCTGG	9102	False	NA	NA	False	NA	NA	NA	50313103	50315738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50314063_50314291_50314407_50315013_50315139_50315358
transcript_36835.known	chr16	+	5371	20	FSM	ENSG00000083799.18	ENST00000311559.13	5371	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	33.2927083928743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	-8	True	NA	NA	False	NA	NA	NA	50742073	50798617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50742125_50742761_50742842_50744729_50744867_50749575_50750203_50751603_50751907_50754318_50754425_50775165_50775175_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_36837.known	chr16	+	3513	18	FSM	ENSG00000083799.18	ENST00000569418.5	3513	18	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	17.7865078526308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	7	False	NA	10	True	AATAAA	-17	NA	50742049	50796881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50742125_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_36842.known	chr16	+	2248	2	FSM	ENSG00000261241.8	ENST00000576842.2	2264	2	16	0	16	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTCTGAGAGTCCCT	25	False	NA	NA	False	AATAAA	-17	NA	50880208	50884101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_50880262_50881906
transcript_36843.nic	chr16	-	2315	2	ISM	ENSG00000103449.13	ENST00000251020.9	5134	3	11839	0	11166	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTCTGTGTTTTTAG	2451	False	NA	17	True	GATAAA	-7	NA	51139431	51135981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_51137553_51138687
transcript_36845.known	chr16	+	1377	1	FSM	ENSG00000224578.5	ENST00000562726.1	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTGCAGAACACCTAT	NA	False	NA	NA	False	GATAAA	-29	NA	51645755	51647132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_51645800_51647100
transcript_36852.nic	chr16	+	2182	5	ISM	ENSG00000177200.18	ENST00000447540.6	11547	39	-13	101110	-13	-16	5prime_fragment	FALSE	canonical	0	0	junction_1	9.2736184954957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAGAAAAAAATACGCA	-34	True	NA	NA	False	NA	NA	NA	53054977	53226387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53055078_53155925_53157542_53209481_53209814_53222643_53222756_53226365
transcript_36854.known	chr16	+	11504	39	FSM	ENSG00000177200.18	ENST00000564845.5	11504	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.10100295833626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTTAATTATTT	NA	False	NA	25	True	ATTAAA	-27	NA	53130920	53327451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53131059_53155925_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307906_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
transcript_36858.nic	chr16	+	2083	4	ISM	ENSG00000177200.18	ENST00000447540.6	11547	39	-13	104819	-13	-77	5prime_fragment	FALSE	canonical	0	0	junction_1	9.28559218478941	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATGAGTCTTCAGAT	-34	True	NA	NA	False	AAGAAA	-8	NA	53054977	53222678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53055078_53155925_53157542_53209481_53209814_53222643
transcript_36859.nic	chr16	+	2160	4	ISM	ENSG00000177200.18	ENST00000447540.6	11547	39	-13	104742	-13	0	5prime_fragment	FALSE	canonical	0	0	junction_1	9.28559218478941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	-34	True	NA	NA	False	ATTAAA	-17	NA	53054977	53222755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53055078_53155925_53157542_53209481_53209814_53222643
transcript_36863.nic	chr16	+	754	4	NIC	ENSG00000177200.18	novel	703	3	NA	NA	-29	-16	intron_retention	FALSE	canonical	3	14	junction_1	3.39934634239519	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAGAAAAAAATACGCA	-4	True	NA	NA	False	NA	NA	NA	53208421	53226387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_53208710_53209481_53209814_53222643_53222756_53226365
transcript_36864.nnic	chr16	+	645	4	NNC	ENSG00000177200.18	novel	242	4	NA	NA	-28	-16	intron_retention	FALSE	canonical	0	0	junction_1	9.93310961716756	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAGAAAAAAATACGCA	-3	True	NA	NA	False	NA	NA	NA	53208422	53226387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_53208602_53209481_53209814_53222643_53222756_53226365
transcript_36865.nic	chr16	+	1954	3	ISM	ENSG00000177200.18	ENST00000615216.4	10603	38	5	117722	-1	-34	5prime_fragment	FALSE	canonical	0	0	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTCTAAGTTAAAAGAG	26	True	NA	NA	False	AAAACA	-5	NA	53055037	53209779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53055078_53155925_53157542_53209481
transcript_36869.known	chr16	+	703	3	FSM	ENSG00000177200.18	ENST00000565442.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	-12	True	NA	NA	False	ATTAAA	-17	NA	53208450	53222755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53208710_53209481_53209814_53222643
transcript_36873.known	chr16	+	720	2	FSM	ENSG00000177200.18	ENST00000561869.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATCATGTTAGAGTC	27	True	NA	NA	False	NA	NA	NA	53055038	53121980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53055078_53121299
transcript_36876.known	chr16	+	968	2	FSM	ENSG00000177200.18	ENST00000564582.2	968	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGTTCAATATTTAT	-11	True	NA	14	True	AATAAA	-28	NA	53099179	53122178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53099269_53121299
transcript_36877.nic	chr16	+	586	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-29	12976	-29	-34	5prime_fragment	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTCTAAGTTAAAAGAG	-4	True	NA	NA	False	AAAACA	-5	NA	53208421	53209779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53208710_53209481
transcript_36878.nic	chr16	+	1112	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-29	12450	-29	492	5prime_fragment	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTAATACCATATAAATC	-4	True	NA	NA	False	AATAAA	-44	NA	53208421	53210305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_53208710_53209481
transcript_36882.nic	chr16	-	2105	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	16.0769753312764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	53503266	53491378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36883.known	chr16	-	1162	10	FSM	ENSG00000166971.17	ENST00000570004.5	1162	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	40.4145188432738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGCCAGTGTTTTCCA	-5	True	NA	-5	True	AGTAAA	-17	NA	53503223	53492304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503117
transcript_36884.known	chr16	-	2384	10	FSM	ENSG00000166971.17	ENST00000394657.12	2384	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.7406298511598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	9	True	NA	NA	False	ATTAAA	-19	NA	53503209	53491039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36888.nic	chr16	-	1794	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-22	-42	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	16.0769753312764	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGAAACTACCCTTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	53503266	53491689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36891.nic	chr16	-	1176	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	16.0769753312764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGACTGCCAGTGTTTT	NA	False	NA	-8	True	AGTAAA	-14	NA	53503266	53492307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_36896.nic	chr16	-	1496	12	ISM	ENSG00000103494.16	ENST00000564374.5	3877	25	0	53018	0	4469	5prime_fragment	FALSE	canonical	3	34	junction_7	27.9409057633433	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTCTGAACTTCATCG	-1	True	NA	NA	False	TATAAA	-3	NA	53703889	53658412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
transcript_36899.nnic	chr16	-	1840	4	NNC	ENSG00000103494.16	novel	2429	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.6055552676731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTGTTTTTATTTTC	-1	True	NA	NA	False	AATAAA	-23	NA	53703889	53693311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_53694187_53695509_53696296_53700638_53700731_53703802
transcript_36902.known	chr16	-	893	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	15.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGATTTATGTGCAAAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	53703938	53695630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_53696296_53700638_53700731_53703802
transcript_36904.known	chr16	-	2429	4	FSM	ENSG00000103494.16	ENST00000568653.7	2429	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	52.2323867176508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTGTTTTTATTTTC	7	True	NA	NA	False	AATAAA	-23	NA	53703847	53693311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_53695459_53696150_53696296_53700638_53700731_53703802
transcript_36906.known	chr16	+	11573	9	FSM	ENSG00000140718.21	ENST00000471389.6	11573	9	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	39.645105309483	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATGCTTGGTGTTA	-6	True	NA	NA	False	AATAAA	-14	NA	53704155	54121941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761
transcript_36909.known	chr16	-	1866	5	FSM	ENSG00000245694.11	ENST00000559598.7	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	109.130655638093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTAACCTTTTGGGGT	19	True	NA	-32	True	TATAAA	-37	NA	54928827	54917969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928493
transcript_3691.known	chr1	-	3594	31	FSM	ENSG00000078618.23	ENST00000352171.12	3594	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	199.502773581388	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-1	True	NA	-22	True	AATAAA	-26	NA	51878727	51789209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_36910.known	chr16	-	1603	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	15.1739909054935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAACCTTTTGGGGTTT	8	True	NA	-30	True	ATTAAA	-2	NA	54928838	54917967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
transcript_36913.nnic	chr16	+	2803	14	NNC	ENSG00000087245.13	novel	3514	13	NA	NA	-29	0	intron_retention	FALSE	non_canonical	0	0	junction_1	75.1492400761556	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTTGCCATCTGTTT	-1	True	NA	10	True	AATAAA	-16	NA	55479168	55506237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_55479276_55479561_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_36914.known	chr16	+	832	2	FSM	ENSG00000087253.13	ENST00000566911.1	832	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCTGCAGTGGCATA	-6	True	NA	NA	False	NA	NA	NA	55509071	55526058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_55509353_55525507
transcript_36917.known	chr16	-	1835	14	FSM	ENSG00000198848.13	ENST00000361503.8	1835	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	2.67577340475786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGATCCAGCCGGCCTT	932	False	NA	NA	False	NA	NA	NA	55833186	55803048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_55803233_55803528_55803602_55806332_55806465_55810516_55810665_55810926_55811011_55812902_55813044_55816923_55816963_55819534_55819640_55820371_55820480_55821367_55821522_55823549_55823684_55826150_55826296_55828766_55828972_55833003
transcript_36918.nnic	chr16	-	553	3	NNC	ENSG00000198848.13	novel	659	4	NA	NA	6787	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	5225	False	NA	NA	False	AATAAA	-20	NA	55803868	55802850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_55803233_55803528_55803602_55803770
transcript_36919.known	chr16	-	2540	18	FSM	ENSG00000125124.14	ENST00000682855.1	2540	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	41.6706480220118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTCCTAAATCTTGG	1	True	NA	NA	False	AATAAA	-21	NA	56520024	56470402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36920.known	chr16	-	2704	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	34.6896395736537	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTGATTGATTATA	1	True	NA	0	True	ATTAAA	-17	NA	56520024	56484384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36921.known	chr16	-	2835	17	FSM	ENSG00000125124.14	ENST00000682737.1	2835	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	43.4690982193098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	56520114	56484132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519956
transcript_36922.known	chr16	-	2992	16	FSM	ENSG00000125124.14	ENST00000684020.1	2992	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	35.8269916869018	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	23	False	56520091	28	True	ATTAAA	-45	NA	56520068	56484356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36924.known	chr16	-	2611	16	FSM	ENSG00000125124.14	ENST00000683020.1	2611	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	45.2695629903066	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	16	False	56520091	28	True	ATTAAA	-45	NA	56520075	56484356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36927.known	chr16	-	2928	17	FSM	ENSG00000125124.14	ENST00000682493.1	2928	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	44.0310614793693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-4	True	NA	28	True	ATTAAA	-45	NA	56520095	56484356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498694_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36929.known	chr16	-	2638	16	FSM	ENSG00000125124.14	ENST00000682449.1	2638	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	45.8473796658241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	16	False	56520091	28	True	ATTAAA	-45	NA	56520075	56484356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36930.known	chr16	-	2610	17	FSM	ENSG00000125124.14	ENST00000682658.1	2610	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	44.5382121750526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTGAGTTTGTACTTT	1	True	NA	-3	True	TATAAA	-22	NA	56520024	56484449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502701_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_36936.known	chr16	+	4587	13	FSM	ENSG00000087263.17	ENST00000566157.6	4587	13	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_8	26.8762596604017	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTTCTCTCTTTAT	8	True	NA	7	True	GATAAA	-24	NA	56451553	56479104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56451767_56453262_56453409_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_36951.known	chr16	-	4393	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	0	0	0	multi-exon	TRUE	canonical	3	1151	junction_4	78.4615971174575	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGATTGTTTTGG	-5	True	NA	-7	True	AATAAA	-18	NA	56451332	56429132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
transcript_36958.known	chr16	+	642	2	FSM	ENSG00000087263.17	ENST00000569645.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCAGGATGGAGAGAGTG	10	True	NA	NA	False	NA	NA	NA	56451555	56453693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56451767_56453262
transcript_36959.known	chr16	+	2415	13	FSM	ENSG00000087263.17	ENST00000336111.9	2415	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	160.43714155048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAGAAAA	-22	True	NA	NA	False	NA	NA	NA	56451523	56477129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56451568_56453262_56453381_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_36960.known	chr16	+	401	3	FSM	ENSG00000125148.7	ENST00000245185.6	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	-2	True	NA	15	True	AATAAA	-16	NA	56608583	56609497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56608684_56608991_56609058_56609262
transcript_36961.known	chr16	+	903	1	FSM	ENSG00000125148.7	ENST00000562017.1	903	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	9	False	NA	15	True	AATAAA	-16	NA	56608594	56609497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56608600_56609500
transcript_36962.known	chr16	+	186	3	FSM	ENSG00000260549.3	ENST00000566367.2	186	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGGACAGCCCTGCTCC	70	False	NA	NA	False	NA	NA	NA	56617562	56618680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56617591_56618178_56618245_56618588
transcript_36963.known	chr16	+	704	3	FSM	ENSG00000169715.15	ENST00000306061.10	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	0.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	7297	False	NA	16	True	AATAAA	-18	NA	56625474	56627112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56625880_56626465_56626532_56626879
transcript_36964.known	chr16	+	332	2	FSM	ENSG00000169715.15	ENST00000568293.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	-3	True	NA	16	True	AATAAA	-18	NA	56625780	56627112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56625880_56626879
transcript_36965.known	chr16	+	746	2	FSM	ENSG00000169715.15	ENST00000330439.7	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	-3	True	NA	16	True	AATAAA	-18	NA	56625780	56627112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56625880_56626465
transcript_36966.known	chr16	+	398	3	FSM	ENSG00000205364.4	ENST00000379818.4	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	-1	True	NA	4	True	AATAAA	-17	NA	56632658	56633981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56632760_56633339_56633406_56633750
transcript_36967.known	chr16	+	186	3	FSM	ENSG00000255986.6	ENST00000444023.4	186	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAACAGCTCTTCTCC	90	False	NA	NA	False	NA	NA	NA	56635817	56636943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56635846_56636438_56636505_56636851
transcript_36968.known	chr16	+	396	3	FSM	ENSG00000205362.11	ENST00000290705.12	396	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTCTGGTTTTCTTT	-2	True	NA	NA	False	AATAAA	-15	NA	56638665	56640087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56638767_56639263_56639330_56639858
transcript_36969.known	chr16	+	425	3	FSM	ENSG00000198417.7	ENST00000334350.7	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	6	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTCAGTTTCCCTT	-1	True	NA	9	True	ATTAAA	-15	NA	56657958	56659303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56658087_56658674_56658741_56659072
transcript_36970.known	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	67	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	3	True	NA	11	True	ATTAAA	-17	NA	56658011	56659305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56658087_56658674_56658783_56659072
transcript_36972.known	chr16	-	406	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	102	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGGTTCCTGTTGTGT	-2	True	NA	-1	True	ATTAAA	-18	NA	56668065	56666730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56666971_56667311_56667378_56667965
transcript_36974.known	chr16	-	305	2	FSM	ENSG00000125144.14	ENST00000569500.5	305	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	29	False	NA	-5	True	ATTAAA	-14	NA	56668034	56666734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_56666971_56667965
transcript_36975.nnic	chr16	+	643	3	NNC	ENSG00000205358.4	novel	397	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	110	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	-10	True	NA	14	True	ATTAAA	-14	NA	56669796	56671129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_56669913_56670505_56670572_56670668
transcript_36976.known	chr16	+	397	3	FSM	ENSG00000205358.4	ENST00000332374.5	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	5	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	7	True	NA	14	True	ATTAAA	-14	NA	56669813	56671129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56669913_56670505_56670572_56670897
transcript_36977.known	chr16	+	697	2	FSM	ENSG00000205358.4	ENST00000569155.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	4	True	NA	14	True	ATTAAA	-14	NA	56669839	56671129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56669913_56670505
transcript_36978.known	chr16	+	404	3	FSM	ENSG00000187193.9	ENST00000394485.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_2	54	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	0	True	NA	6	True	AATAAA	-14	NA	56682469	56684196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56682569_56683164_56683231_56683957
transcript_36979.known	chr16	+	549	3	FSM	ENSG00000187193.9	ENST00000564974.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	551.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	11	False	NA	6	True	AATAAA	-14	NA	56682480	56684196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56682569_56683164_56683387_56683957
transcript_36980.known	chr16	+	1727	1	FSM	ENSG00000187193.9	ENST00000568370.1	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	0	True	NA	6	True	AATAAA	-14	NA	56682469	56684196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56682500_56684200
transcript_36984.known	chr16	+	8234	22	FSM	ENSG00000102900.13	ENST00000308159.10	8234	22	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_7	105.537303589677	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTGCCATGTGCCC	-20	True	NA	NA	False	AGTAAA	-15	NA	56730128	56850286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56730212_56748233_56748427_56758537_56758656_56798475_56798539_56805503_56805633_56818663_56818739_56821503_56821594_56823706_56823847_56828976_56829110_56830527_56830686_56831841_56832008_56832294_56832389_56833214_56833407_56834127_56834255_56834369_56834443_56834733_56834779_56836600_56836718_56837607_56837727_56838951_56839070_56839520_56839605_56841704_56841834_56844498
transcript_37.known	ERCC-00099	+	1344	1	FSM	ERCC-00099A	DQ875387	1344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00099_+_0_1300
transcript_370.known	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_16	48.6679062314469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-33	True	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_37000.known	chr16	+	1862	8	FSM	ENSG00000051108.15	ENST00000300302.9	1862	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	107.822227082644	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	2	True	NA	29	True	AATAAA	-22	NA	56932146	56943881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_37002.known	chr16	+	1388	6	FSM	ENSG00000051108.15	ENST00000344114.8	1388	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.032325188638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	2	True	NA	29	True	AATAAA	-22	NA	56932146	56943881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56942131_56942238_56943125
transcript_37003.known	chr16	+	1125	4	FSM	ENSG00000051108.15	ENST00000569569.5	1125	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	13.9283882771841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCCCCTTTTTCTAGTA	2	True	NA	NA	False	NA	NA	NA	56932146	56937413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234_56935313_56935400_56935476_56936686
transcript_37004.known	chr16	+	571	3	FSM	ENSG00000051108.15	ENST00000568676.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTAGCAGATTGTTCCG	2	True	NA	NA	False	NA	NA	NA	56932146	56935648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_56932392_56935234_56935313_56935400
transcript_3702.known	chr1	-	3819	31	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	259.682415012389	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTTGTTTGTATT	NA	False	NA	-8	True	AATAAA	-40	NA	51878937	51789195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792426_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_37027.known	chr16	-	1086	7	FSM	ENSG00000172775.17	ENST00000567439.5	1086	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	367.845717960971	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTGCATCCTGTGT	-7	True	NA	-81	True	NA	NA	NA	57186040	57154199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185824
transcript_37028.nic	chr16	-	1681	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-58	203	intron_retention	FALSE	canonical	0	0	junction_3	343.115829163013	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGAGAAACAAACGTAG	164	False	NA	41	True	AATAAA	-23	NA	57186174	57153532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_37031.nic	chr16	-	1478	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-58	0	intron_retention	FALSE	canonical	0	0	junction_3	343.115829163013	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGGGGGTGTCACTTC	164	False	NA	-29	True	AGTAAA	-15	NA	57186174	57153735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_37036.nic	chr16	-	984	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	343.115829163013	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTGTGGCCCGAATCG	259	False	NA	-16	True	NA	NA	NA	57186079	57154134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_37038.known	chr16	-	1066	7	FSM	ENSG00000172775.17	ENST00000566077.5	1066	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	378.198654442638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGAATCCACCTGTGGC	1	True	NA	-24	True	NA	NA	NA	57186032	57154142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173797_57185820
transcript_37043.known	chr16	+	3503	15	FSM	ENSG00000159579.14	ENST00000394420.9	3503	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	40.6687088257178	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	5	True	NA	36	True	AATAAA	-21	NA	57186328	57240469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57186452_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_37044.known	chr16	+	3586	15	FSM	ENSG00000159579.14	ENST00000537866.5	3586	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	71.7639625893847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATGAATTATTGACTA	9	True	NA	23	True	AATAAA	-20	NA	57186332	57239957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57187051_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_37045.nic	chr16	+	2449	15	NIC	ENSG00000159579.14	novel	3586	15	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	61.0324436973768	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	143	False	NA	NA	False	AAAAAG	-8	NA	57186293	57239046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_37047.nic	chr16	+	2059	15	NIC	ENSG00000159579.14	novel	3503	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	72.9309150316033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	4	True	NA	NA	False	AAAAAG	-8	NA	57186327	57239046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57186430_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_37051.known	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	16.2185079461706	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	13	True	NA	44	True	AGTAAA	-35	NA	57245258	57253635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
transcript_37053.known	chr16	+	3285	3	FSM	ENSG00000006210.7	ENST00000006053.7	3285	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATGGGTGATTTCTCT	-1	True	NA	6	True	AATAAA	-19	NA	57372489	57385044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57372639_57379633_57379755_57382029
transcript_37058.known	chr16	-	2016	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	321.627016122713	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	NA	False	NA	-18	True	AATAAA	-15	NA	57447419	57428186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
transcript_37060.known	chr16	-	2021	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_2	116.953984006531	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	8	True	NA	-18	True	AATAAA	-15	NA	57447385	57428186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_37072.known	chr16	-	1137	8	FSM	ENSG00000005194.15	ENST00000568940.5	1137	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	379.433304617638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTCATGTTAAGAGAAG	25	False	NA	NA	False	NA	NA	NA	57447368	57428937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57429281_57430257_57430340_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_37073.nic	chr16	-	1438	8	NIC	ENSG00000005194.15	novel	2016	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_7	378.311824735487	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATATCTTGAGATTCTGC	NA	False	NA	-20	True	ATTAAA	-16	NA	57447420	57428553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57447341
transcript_37085.known	chr16	+	1630	9	FSM	ENSG00000088682.14	ENST00000262507.11	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	25.5119457313628	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	-11	True	NA	16	True	AATAAA	-17	NA	57447478	57461270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_3709.nic	chr1	-	2753	11	ISM	ENSG00000078618.23	ENST00000352171.12	3594	31	-78	25978	0	741	5prime_fragment	FALSE	canonical	3	830	junction_9	55.803673714192	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAGGTAAGC	-1	True	NA	NA	False	ATTAAA	-14	NA	51878805	51815187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_37090.known	chr16	+	1764	9	FSM	ENSG00000102978.13	ENST00000219252.10	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_5	36.3797247790579	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	10	True	NA	28	True	AATAAA	-18	NA	57462678	57472009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57462811_57463028_57463079_57465952_57466022_57466174_57466228_57469164_57469294_57469709_57469762_57469960_57470130_57470279_57470355_57470974
transcript_37099.known	chr16	-	1848	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	13.1086511393765	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACAGCAGGTGGCTTC	6609	False	NA	NA	False	NA	NA	NA	57479874	57472876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_37102.known	chr16	-	2851	7	FSM	ENSG00000125170.11	ENST00000566936.5	2851	7	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	10.6562449087639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCTCTGGTTTTCTCC	6678	False	NA	-5	True	AATAAA	-19	NA	57479805	57471921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_37105.known	chr16	+	882	6	FSM	ENSG00000088682.14	ENST00000567933.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	83.6946832242049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTGAAAAATGAGATG	7	True	NA	NA	False	NA	NA	NA	57447496	57460873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57459564_57459721_57460050_57460105_57460588
transcript_37109.known	chr16	+	1827	3	FSM	ENSG00000088682.14	ENST00000566388.5	1827	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	22.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAACATGTTGC	NA	False	NA	NA	False	NA	NA	NA	57447424	57454304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57447579_57451039_57451209_57452800
transcript_37110.known	chr16	+	518	2	FSM	ENSG00000102978.13	ENST00000564626.1	518	2	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTTTCACCCCTAGCC	108	False	NA	NA	False	TATAAA	-40	NA	57462776	57463512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57462811_57463028
transcript_37111.known	chr16	+	1482	8	FSM	ENSG00000088682.14	ENST00000567072.5	1482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.7300647563773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATAAATATGTTTG	4	True	NA	-12	True	NA	NA	NA	57447493	57461242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456627_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_37117.nic	chr16	+	2688	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_16	83.2038513917871	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	-6	True	NA	13	True	ATTAAA	-13	NA	57735750	57757244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
transcript_37118.known	chr16	+	2618	20	FSM	ENSG00000140854.13	ENST00000379661.8	2618	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.2038513917871	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	13	True	NA	13	True	ATTAAA	-13	NA	57735769	57757244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_37119.nic	chr16	+	2795	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_16	93.6534544428868	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	37	False	NA	13	True	ATTAAA	-13	NA	57735853	57757244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_57736117_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_37122.nic	chr16	+	400	4	ISM	ENSG00000159648.13	ENST00000441824.4	1434	8	8598	545	-39	0	3prime_fragment	FALSE	canonical	3	25	junction_1	6.54896090146283	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAATTGTCTCTGTCTGTG	8595	False	NA	8	True	AATAAA	-24	NA	57985141	57987571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_57985268_57985481_57985547_57985908_57985942_57987395
transcript_37125.known	chr16	+	2248	7	FSM	ENSG00000103005.12	ENST00000219281.8	2248	7	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_5	40.297504747675	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGGACTACTTGTA	-22	True	NA	20	True	AATAAA	-22	NA	58001406	58021618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140
transcript_37127.known	chr16	+	1212	6	FSM	ENSG00000103005.12	ENST00000539737.6	1212	6	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_3	262.670439905217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCTCTCTTCCTCTCC	-24	True	NA	NA	False	NA	NA	NA	58001404	58020634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58017333_58017440_58018971_58019056_58020140
transcript_37128.known	chr16	+	1217	4	FSM	ENSG00000103005.12	ENST00000423271.7	1217	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	329.709973562625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCATTTCACTCACCCT	-22	True	NA	NA	False	NA	NA	NA	58001406	58011708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011017
transcript_37129.known	chr16	+	1751	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_3	329.238852844287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	-9	True	NA	7	True	AATAAA	-27	NA	58001419	58013558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
transcript_37131.known	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	31.2512399753994	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-8	True	NA	-3	True	AATAAA	-24	NA	58129381	58113591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
transcript_37135.known	chr16	-	1605	5	FSM	ENSG00000070761.8	ENST00000562622.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	20.6639783197718	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTGTAAATTTGTT	2	True	NA	-17	True	AATAAA	-10	NA	58129371	58113605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58114031_58114809_58115458_58116040_58116153_58116871_58116952_58129031
transcript_37136.known	chr16	-	1887	12	FSM	ENSG00000070770.10	ENST00000262506.8	1887	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	35.3966893908839	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGGAGAGTTTTCAGTA	11	True	NA	NA	False	AATAAA	-16	NA	58198106	58157906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58158354_58164053_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58184259_58184311_58186754_58186857_58196732_58196845_58197632
transcript_37139.known	chr16	+	5272	9	FSM	ENSG00000103021.10	ENST00000219299.8	5272	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	11.0049704679295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	-27	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_37142.known	chr16	+	891	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-11	5009	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	27.7885602655599	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAATTGAAAAAGAAA	14	True	NA	NA	False	AATATA	-43	NA	58249976	58267549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259869_58259869_58259935_58262384_58262541_58267478
transcript_37144.known	chr16	+	5110	8	FSM	ENSG00000103021.10	ENST00000443128.6	5110	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.4729357369109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	-27	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58250116_58252726_58252854_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_37145.known	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	-20	True	NA	19	True	AATACA	-22	NA	58392470	58406147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58392788_58403097_58403332_58404498
transcript_37147.known	chr16	+	1932	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	-2	True	NA	18	True	AATAAA	-19	NA	58392393	58406036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58392788_58404498
transcript_37149.known	chr16	-	655	1	FSM	ENSG00000276131.1	ENST00000613275.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAAGTCCGACCCTTTC	NA	False	NA	-11	True	AATAAA	-24	NA	58392807	58392152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58392200_58392800
transcript_37150.nic	chr16	+	3229	16	NIC	ENSG00000103034.15	novel	583	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	42.8570751322216	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	-13	True	NA	15	True	ATTAAA	-16	NA	58463388	58513619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_58463436_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_37151.known	chr16	+	3324	16	FSM	ENSG00000103034.15	ENST00000258187.9	3324	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	25.0105755409365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTCATTTCTCCCCTG	-8	True	NA	24	True	ATTAAA	-25	NA	58463664	58513628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58463798_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_37154.known	chr16	+	3265	14	FSM	ENSG00000103034.15	ENST00000566192.5	3265	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	42.3346767091826	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	NA	False	NA	15	True	ATTAAA	-16	NA	58500046	58513619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_37158.nic	chr16	-	451	3	ISM	ENSG00000125107.19	ENST00000568158.1	496	4	-26	23841	-3	11	5prime_fragment	FALSE	canonical	3	15	junction_1	21	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTTCTTTTCTTTTTTT	-9	True	NA	NA	False	TATAAA	-13	NA	58629841	58623214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_58623410_58624652_58624795_58629727
transcript_37159.known	chr16	-	304	2	FSM	ENSG00000125107.19	ENST00000569263.1	304	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGGAAGTATTTTCT	42	False	58629857	NA	False	AATAAA	-40	NA	58629847	58623225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58623410_58629727
transcript_37160.known	chr16	+	2042	9	FSM	ENSG00000103037.12	ENST00000310682.6	2042	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	26.5753645318366	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGGGGAAAAGGATAT	0	True	NA	NA	False	TTTAAA	-39	NA	58515478	58519662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58515565_58515790_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_37166.known	chr16	+	873	1	FSM	ENSG00000276259.1	ENST00000622896.1	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTGTGTTCAAC	7446	False	NA	2	True	AATAAA	-18	NA	58522969	58523842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_58523000_58523800
transcript_37168.nic	chr16	-	2669	12	NIC	ENSG00000103042.9	novel	4058	12	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	56.1363452337106	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGCAGGGCTGGGCG	14	True	NA	NA	False	NA	NA	NA	58684745	58666377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684084_58684716
transcript_37169.known	chr16	-	4058	12	FSM	ENSG00000103042.9	ENST00000219320.9	4058	12	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_11	32.0930980453549	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTCCCCTGTGTCTGA	-11	True	NA	-6	True	AATAAA	-19	NA	58684770	58665108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
transcript_3717.known	chr1	-	1020	2	FSM	ENSG00000078618.23	ENST00000491410.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTATATCTCTCAGAGG	33	False	NA	NA	False	TATAAA	-41	NA	51878771	51839991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51840515_51878274
transcript_37174.known	chr16	-	2867	8	FSM	ENSG00000103042.9	ENST00000564100.5	2867	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	72.2425054371506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGCTGGGCGCAGTGG	52	False	NA	NA	False	NA	NA	NA	58684707	58666371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58667488_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954
transcript_37176.known	chr16	-	2421	10	FSM	ENSG00000125166.13	ENST00000245206.10	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_8	58.0748771675386	944	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTACTAAGTTATC	0	True	NA	-15	True	AATAAA	-17	NA	58734316	58707130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
transcript_37180.known	chr16	-	566	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15598	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGCTATCAACCT	NA	False	NA	NA	False	AATAAA	-30	NA	61055964	61055398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_61055400_61056000
transcript_37181.known	chr16	-	3986	9	FSM	ENSG00000150394.14	ENST00000584337.5	3986	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.1514304763539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTTCTCTGAAGAAA	1	True	NA	NA	False	AATAAA	-43	NA	62036402	61725165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_61727216_61789345_61789483_61817478_61817733_61820925_61821114_61825011_61825180_61857118_61857239_61901178_61901474_62021151_62021603_62036079
transcript_37187.known	chr16	-	539	2	FSM	ENSG00000150394.14	ENST00000577228.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTAACTGGAGATATC	NA	False	NA	NA	False	NA	NA	NA	61918714	61901391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_61901474_61918257
transcript_37191.nnic	chr16	-	639	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-71	1	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_2	311.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-105	True	AATAAA	-18	NA	65235004	65229844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65230206_65233014_65233174_65234885
transcript_37193.nnic	chr16	-	768	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-71	-1	-71	1	multi-exon	FALSE	canonical	3	159	junction_2	293	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-105	True	AATAAA	-18	NA	65235004	65229844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_65230206_65233014_65233303_65234885
transcript_37196.nnic	chr16	-	349	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-82	-10	at_least_one_novel_splicesite	FALSE	canonical	3	204	junction_1	28.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	NA	False	NA	-29	True	AATAAA	-17	NA	65235015	65227904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65228022_65233014_65233117_65234885
transcript_37200.nnic	chr16	-	593	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-82	1	at_least_one_novel_splicesite	FALSE	canonical	3	261	junction_2	242	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-105	True	AATAAA	-18	NA	65235015	65229844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_65230206_65233014_65233117_65234885
transcript_37203.known	chr16	-	146	2	FSM	ENSG00000260834.2	ENST00000565901.1	146	2	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACACATGTGTACAGCA	8	True	NA	-19	True	AATAAA	-27	NA	65234904	65227894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_65228022_65234885
transcript_37204.nnic	chr16	-	527	2	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-118	1	combination_of_known_splicesites	FALSE	canonical	3	1912	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-105	True	AATAAA	-18	NA	65235051	65229844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_65230206_65234885
transcript_37205.known	chr16	-	2745	9	FSM	ENSG00000166548.17	ENST00000527800.6	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	3.39116499156263	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCCTGAAGCTTTGGA	9	True	NA	-10	True	AATAAA	-16	NA	66549856	66510743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977
transcript_37206.known	chr16	+	656	4	FSM	ENSG00000217555.13	ENST00000264001.9	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	77.5112895003044	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	-36	True	NA	21	True	ATTAAA	-21	NA	66552575	66566068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66558189_66558349_66563121_66563218_66565885
transcript_37208.known	chr16	+	571	3	FSM	ENSG00000217555.13	ENST00000345436.8	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	50	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66558189_66558349_66565885
transcript_37209.known	chr16	+	508	3	FSM	ENSG00000217555.13	ENST00000351137.8	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	42.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66563121_66563218_66565885
transcript_37210.nic	chr16	+	528	3	NIC	ENSG00000217555.13	novel	656	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	128.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	-17	True	NA	21	True	ATTAAA	-21	NA	66552594	66566068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_66552794_66563071_66563218_66565885
transcript_37211.known	chr16	+	564	2	FSM	ENSG00000217555.13	ENST00000526149.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGAGCATAAGTTCT	-39	True	NA	NA	False	NA	NA	NA	66552572	66558532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66558189
transcript_37212.known	chr16	+	412	2	FSM	ENSG00000217555.13	ENST00000362093.4	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66552794_66565885
transcript_37215.known	chr16	-	4326	13	FSM	ENSG00000135720.13	ENST00000258198.7	4326	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	34.9221356098901	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGGCTTTCTTTAT	1	True	NA	-3	True	AATAAA	-23	NA	66751609	66720892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_37216.known	chr16	-	1502	12	FSM	ENSG00000135720.13	ENST00000443351.6	1502	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	87.0948945757271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCACATCTGGGCTTC	9	True	NA	NA	False	NA	NA	NA	66751601	66723477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66749196_66749314_66751272_66751347_66751484
transcript_3722.known	chr1	-	3149	31	FSM	ENSG00000078618.23	ENST00000485608.5	3149	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	288.942985533286	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTGTATTTTAAAA	24	True	NA	-24	True	AATAAA	-24	NA	51840454	51789211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51840225
transcript_37221.nic	chr16	-	866	7	ISM	ENSG00000135720.13	ENST00000258198.7	4326	13	-23	11550	-23	-434	5prime_fragment	FALSE	canonical	3	242	junction_3	38.2651567646367	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAAAAACCTCGACTT	194	False	NA	NA	False	NA	NA	NA	66751632	66732442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_37226.known	chr16	-	1909	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_20	406.688136045299	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTAGTCTTGTTCTT	-33	True	NA	NA	False	AATAAA	-17	NA	66830976	66802879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
transcript_37232.known	chr16	-	1813	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	0	0	0	multi-exon	FALSE	canonical	3	1311	junction_19	83.7365939987723	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-33	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_37239.known	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_18	320.845622660255	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-12	True	NA	NA	False	NA	NA	NA	66830955	66802911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_3727.known	chr1	-	12780	5	FSM	ENSG00000169213.7	ENST00000371655.4	12780	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	14.0423466699836	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	13	True	NA	-10	True	ATTAAA	-17	NA	51990700	51907955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_37275.known	chr16	+	6997	2	FSM	ENSG00000172840.7	ENST00000311765.4	6997	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTAGTTTCTTTTGG	-44	True	NA	0	True	ATTAAA	-24	NA	66880514	66891101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66880641_66884230
transcript_37277.known	chr16	-	668	5	FSM	ENSG00000166595.12	ENST00000422424.7	668	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	492.605509002894	824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCAGCATGCCTTGGTG	-8	True	NA	-13	True	AATAAA	-16	NA	66934402	66932064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_37278.known	chr16	+	3858	13	FSM	ENSG00000172828.13	ENST00000303334.9	3858	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.53432938662683	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGGTCCACACTGCC	4	True	NA	24	True	AATAAA	-16	NA	66961265	66975149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66961390_66963178_66963384_66963490_66963630_66963801_66963936_66964356_66964511_66964622_66964728_66966243_66966346_66966724_66966866_66969678_66969760_66971171_66971320_66972355_66972506_66972667_66972747_66972853
transcript_37279.known	chr16	+	3868	12	FSM	ENSG00000172831.14	ENST00000417689.6	3868	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	35.0916156311348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAAATAAATTCT	-26	True	NA	-10	True	NA	NA	NA	66934443	66945069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942738_66943298_66943372_66943838
transcript_37280.known	chr16	+	2871	12	FSM	ENSG00000172831.14	ENST00000317091.10	2871	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	20.1100279249059	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTGCCTCTCCCC	-7	True	NA	17	True	AATAAA	-18	NA	66935515	66945096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_37284.known	chr16	+	2818	6	FSM	ENSG00000067955.15	ENST00000651988.1	2818	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	264.10255583769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTTCTGTGTAGTAA	NA	False	NA	82	True	NA	NA	NA	67028983	67101035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67029028_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_37285.nic	chr16	+	2818	6	NIC	ENSG00000067955.15	novel	3103	6	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	261.075008378818	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	-6	True	NA	105	True	AATAAA	-18	NA	67029097	67101058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082309_67098709
transcript_37286.known	chr16	+	584	6	FSM	ENSG00000067955.15	ENST00000561924.6	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	256.669904741479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACACATTGCTTCTAG	12	False	NA	-46	True	NA	NA	NA	67029115	67098811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_37288.known	chr16	+	3134	6	FSM	ENSG00000067955.15	ENST00000290858.11	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	125.195846576474	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	-11	True	NA	105	True	AATAAA	-18	NA	67029148	67101058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_37291.known	chr16	+	1353	17	FSM	ENSG00000125149.12	ENST00000569600.5	1353	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	35.0708546196126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCACCACCCATGCCC	15	True	NA	NA	False	NA	NA	NA	67109962	67147131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67109990_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_37294.nic	chr16	+	2785	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	80	junction_1	23.506647995833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	11	True	NA	18	True	NA	NA	NA	67109958	67148544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_37297.known	chr16	+	1592	6	FSM	ENSG00000140939.14	ENST00000564053.5	1592	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.64269439186635	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGGGTGACTTCTCT	7	True	NA	NA	False	NA	NA	NA	67170539	67175485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67170575_67171151_67171458_67173861_67174047_67174161_67174465_67174620_67174945_67175046
transcript_37298.known	chr16	-	2824	3	FSM	ENSG00000196123.13	ENST00000561679.5	2824	3	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_2	4.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGGCCTTTG	5985	False	NA	-7	True	ATTAAA	-12	NA	67179552	67175603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67176976_67178009_67178108_67178198
transcript_37299.known	chr16	+	2110	10	FSM	ENSG00000205250.9	ENST00000379378.8	2110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	308.225066076763	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATGTGGTTCTTTGG	-16	True	NA	21	True	AATAAA	-18	NA	67192154	67198918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67192363_67192760_67192871_67193008_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_3730.known	chr1	-	800	8	FSM	ENSG00000117862.13	ENST00000472624.5	800	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	607.2637526694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAGAGTTAGTGTTCTG	10	True	NA	NA	False	AAGAAA	-41	NA	52055176	52020913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52030366_52030549_52041536_52041598_52054999
transcript_37302.known	chr16	+	2486	20	FSM	ENSG00000102890.16	ENST00000393997.8	2486	20	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	11.6006972758244	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGCCAGCTCTGTA	-1	True	NA	9	True	AATAAA	-20	NA	67199130	67204004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67199405_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_37303.known	chr16	+	2281	19	FSM	ENSG00000102890.16	ENST00000477898.5	2281	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.895831120317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGAGCCTGTGACAGT	10	False	NA	34	True	AATAAA	-45	NA	67199508	67204029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_37304.known	chr16	-	1468	7	FSM	ENSG00000125122.17	ENST00000637247.1	1468	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.44802681092953	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTGTCTTAAGTTCT	9829	False	NA	NA	False	ATTAAA	-14	NA	67226818	67207139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67207505_67207598_67207774_67207872_67208091_67208311_67208456_67210047_67210323_67223825_67223928_67226629
transcript_37307.known	chr16	+	776	6	FSM	ENSG00000168701.19	ENST00000304800.14	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_4	36.9940535762168	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	-8	True	NA	25	True	AATAAA	-15	NA	67227129	67229278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_37309.known	chr16	+	775	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	232.36522975695	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	19	True	NA	25	True	AATAAA	-15	NA	67227156	67229278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
transcript_37311.known	chr16	+	887	6	FSM	ENSG00000168701.19	ENST00000563953.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	233.559414282533	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	-18	True	NA	9	True	NA	NA	NA	67227119	67229262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227718_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_37314.known	chr16	+	915	5	FSM	ENSG00000168701.19	ENST00000567193.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	22.3983816379666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTATACTTATACTC	NA	False	NA	-28	True	NA	NA	NA	67227102	67229225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228882_67228975
transcript_37316.known	chr16	+	698	4	FSM	ENSG00000168701.19	ENST00000561586.5	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACCGTTTCTCTTGTAGG	7	True	NA	NA	False	NA	NA	NA	67227144	67228956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494
transcript_37317.known	chr16	+	832	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_4	39.274673773311	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	30	True	NA	25	True	AATAAA	-15	NA	67227167	67229278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
transcript_3732.known	chr1	-	1416	7	FSM	ENSG00000117862.13	ENST00000371626.9	1416	7	0	0	0	0	multi-exon	TRUE	canonical	3	1216	junction_2	108.304226859138	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGATGGCCTTTTT	-5	True	NA	-8	True	AATAAA	-15	NA	52055191	52020130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
transcript_37320.known	chr16	-	1021	4	FSM	ENSG00000159713.11	ENST00000393957.7	1021	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCTGGTTGACGATGA	-3	True	NA	-1	True	AATAAA	-18	NA	67393498	67389808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67390363_67390478_67390633_67390923_67391118_67393379
transcript_37321.nic	chr16	+	1678	5	NIC	ENSG00000176387.7	novel	540	4	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	50.9239629251299	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	-27	True	NA	44	True	AATAAA	-25	NA	67430604	67437553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_67430780_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_37323.known	chr16	-	905	6	FSM	ENSG00000159720.13	ENST00000565835.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	236.431469986548	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAGGATGGACGAAGA	2467	False	NA	NA	False	GGGGCT	-13	NA	67481079	67438320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67480956
transcript_37324.known	chr16	-	1636	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	0	0	0	0	multi-exon	TRUE	canonical	3	507	junction_6	36.284026957394	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCTGTCTCGTTTAG	-4	True	NA	-5	True	AATAAA	-21	NA	67481157	67438018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
transcript_37325.known	chr16	+	696	2	FSM	ENSG00000270049.4	ENST00000602596.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGCCTGTAGTAG	-4	True	NA	NA	False	AATAAA	-17	NA	67481383	67484669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67481520_67484109
transcript_37326.known	chr16	+	3706	12	FSM	ENSG00000102974.16	ENST00000646771.1	3706	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	114.371079393581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTACAGCTAATAAATC	34	True	NA	-26	True	AATAAA	-39	NA	67562588	67639138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637693
transcript_37327.nic	chr16	+	928	3	ISM	ENSG00000102974.16	ENST00000646771.1	3706	12	103	27537	103	280	5prime_fragment	FALSE	canonical	3	443	junction_1	13.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAAAGGTAAAACG	85	False	NA	NA	False	NA	NA	NA	67562691	67611601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_67562725_67571147_67571265_67610823
transcript_37329.known	chr16	-	1408	12	FSM	ENSG00000102977.17	ENST00000602320.1	1408	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	155.449973351159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCATGCGGCAGGAGAG	13	True	NA	-39	True	AATAAA	-3	NA	67660239	67657545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67657685_67657761_67657815_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660037_67660121
transcript_37332.known	chr16	-	2065	12	FSM	ENSG00000102977.17	ENST00000620338.4	2065	12	0	0	0	0	multi-exon	TRUE	canonical	3	349	junction_1	35.5358043166291	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGCCGCCGCCTCTTT	6592	False	NA	-6	True	AATAAA	-36	NA	67660815	67657512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660046_67660121
transcript_37333.nnic	chr16	-	1509	12	NNC	ENSG00000102977.17	novel	2065	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	119.246879128211	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGGAGAGGATCAGGG	-6	True	NA	-26	True	AATAAA	-16	NA	67660297	67657532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659719_67659796_67659902_67660046_67660121
transcript_37347.known	chr16	-	1858	9	FSM	ENSG00000102977.17	ENST00000602860.5	1858	9	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	40.8516753022443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTTTTTAATAAAATAAT	10	True	NA	-56	True	NA	NA	NA	67660281	67657562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659614_67659701_67659796_67659902_67660046_67660121
transcript_3735.known	chr1	-	1708	1	FSM	ENSG00000198841.4	ENST00000371614.2	1708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATCTCTTTCACTTAA	-11	True	NA	-4	True	AATAAA	-19	NA	52033810	52032102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52032100_52033800
transcript_37354.known	chr16	+	1248	3	FSM	ENSG00000102981.10	ENST00000219255.3	1248	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	70.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	-10	True	NA	12	True	ATTAAA	-18	NA	67660958	67662774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67661102_67661454_67661678_67661892
transcript_37355.known	chr16	+	1244	3	FSM	ENSG00000102981.10	ENST00000458121.7	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	37.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	-9	True	NA	12	True	ATTAAA	-18	NA	67660959	67662774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67661102_67661454_67661678_67661895
transcript_37357.known	chr16	+	1281	2	FSM	ENSG00000102981.10	ENST00000602727.1	1281	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCAGCCTGGGGAA	180	False	NA	-32	True	NA	NA	NA	67661231	67662730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67661678_67661895
transcript_37359.nnic	chr16	-	873	5	NNC	ENSG00000124074.12	novel	1253	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.7164451068153	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTCCATAAGAGCTT	-25	True	NA	-1	True	ATTAAA	-16	NA	67666751	67662945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936_67663999_67666617
transcript_37360.known	chr16	+	1266	4	FSM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.9566858950296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-7	True	NA	11	True	AATAAA	-18	NA	67666813	67668755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668199
transcript_37361.known	chr16	+	1314	4	FSM	ENSG00000159761.15	ENST00000445068.1	1314	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	12.5698050899765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	16	True	NA	13	True	AATAAA	-20	NA	67666836	67668757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67667073_67667226_67667526_67667877_67668099_67668199
transcript_37362.nnic	chr16	-	894	4	NIC	ENSG00000124074.12	novel	1253	4	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	28.2881993457028	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTCCATAAGAGCTT	1120	False	NA	-1	True	ATTAAA	-16	NA	67666287	67662945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_67663322_67663419_67663557_67663656_67663821_67666070
transcript_37364.known	chr16	-	1991	3	FSM	ENSG00000141098.13	ENST00000602377.1	1991	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	49.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATGTGGTTTTTGTTTG	-5	True	NA	-2	True	AATAAA	-20	NA	67719339	67674530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67676054_67685511_67685803_67719162
transcript_37365.known	chr16	-	2018	3	FSM	ENSG00000141098.13	ENST00000268797.12	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	7.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGGCATGTGGTTTTT	18	True	NA	-7	True	AATAAA	-15	NA	67719316	67674535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67676054_67685456_67685803_67719162
transcript_3737.known	chr1	+	892	7	FSM	ENSG00000134717.18	ENST00000477828.6	892	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	572.203537990538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACTAAAAGTTTGGT	43	False	NA	NA	False	NA	NA	NA	52056198	52086747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52059834_52059902_52060427_52060660_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_37370.known	chr16	-	2580	16	FSM	ENSG00000102901.13	ENST00000562787.6	2580	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	168.993438399904	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	4	True	NA	0	True	AATAAA	-16	NA	67847693	67828156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749_67834101_67835171_67835301_67835537_67835659_67847400
transcript_37387.known	chr16	-	2133	12	FSM	ENSG00000102901.13	ENST00000565157.5	2133	12	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	52.560708701211	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	0	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_37402.known	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	TRUE	canonical	3	366	junction_4	30.8776958137331	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-16	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
transcript_37408.known	chr16	+	2120	5	FSM	ENSG00000102898.12	ENST00000219169.9	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	464.994892445068	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCTTTCTTCCAA	3	True	NA	14	True	AATAAA	-15	NA	67846932	67872567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_37409.known	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1046.77179342013	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	-18	True	NA	28	True	AATAAA	-29	NA	67847160	67871323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_3741.known	chr1	+	4533	6	FSM	ENSG00000134717.18	ENST00000313334.13	4533	6	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_1	73.6966756373719	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTCTGATGCGGCAG	-17	True	NA	4	True	AATACA	-17	NA	52056294	52090716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_37412.known	chr16	+	1876	1	FSM	ENSG00000168286.3	ENST00000303596.3	1876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTCTCGCCATTTTAT	11	True	NA	16	True	ATTAAA	-19	NA	67842319	67844195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67842300_67844200
transcript_37413.known	chr16	-	1990	11	FSM	ENSG00000102901.13	ENST00000436104.6	1990	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	160.426805740188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	0	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67828391_67828473_67828560_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831840_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_37414.known	chr16	+	4767	29	FSM	ENSG00000038358.15	ENST00000358933.10	4767	29	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_17	42.155733505028	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTATGTGTGTGCTTTT	-36	True	NA	17	True	AATAAA	-2	NA	67873051	67884499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67873344_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67877657_67877740_67877846_67878165_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67881846_67881953_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883178_67883567_67883732_67883955
transcript_37415.known	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	15.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	-8	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67884983_67885721_67885855_67885973
transcript_37416.nnic	chr16	+	635	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	26.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	NA	False	NA	28	True	ATTAAA	-17	NA	67884841	67886368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_67884983_67885721_67885855_67886007
transcript_37417.nnic	chr16	+	607	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	38	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	-10	True	NA	28	True	ATTAAA	-17	NA	67884882	67886368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_67884983_67885742_67885855_67885973
transcript_37421.known	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	269.826853022906	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-13	True	NA	-4	True	AATAAA	-20	NA	67936850	67934505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
transcript_37425.known	chr16	-	591	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	42.4604391038163	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-15	True	NA	-4	True	AATAAA	-20	NA	67935795	67934505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
transcript_37426.nic	chr16	-	624	3	ISM	ENSG00000205220.12	ENST00000570985.1	591	4	70	0	70	0	intron_retention	FALSE	canonical	3	545	junction_2	36	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-45	True	NA	-4	True	AATAAA	-20	NA	67935725	67934505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_67934672_67934796_67934949_67935419
transcript_37428.known	chr16	+	3497	3	FSM	ENSG00000159792.10	ENST00000291041.6	3497	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGCTTCTTGCTGT	-7	True	NA	34	True	AGTAAA	-39	NA	67893253	67929676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67893372_67908679_67909707_67927324
transcript_37429.known	chr16	+	1509	2	FSM	ENSG00000159792.10	ENST00000570631.5	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTTTTGTTTTGTTT	11	True	NA	NA	False	NA	NA	NA	67893271	67910088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_67893372_67908679
transcript_37430.known	chr16	-	3627	24	FSM	ENSG00000124067.17	ENST00000541864.6	3627	24	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_23	39.9961718394992	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGGTAGCCAGGGA	2745	False	NA	NA	False	NA	NA	NA	67966878	67944481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
transcript_37433.known	chr16	+	4122	11	FSM	ENSG00000072736.19	ENST00000563319.5	4122	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.6068092689725	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAAGA	4497	False	NA	103	True	AAAAAG	-11	NA	68084750	68226934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68085181_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68214328_68214433_68226349
transcript_37437.known	chr16	+	1982	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	19.5095129039656	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-6	True	NA	13	True	CATAAA	-1	NA	68023283	68079320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_37442.known	chr16	+	1933	16	FSM	ENSG00000167264.18	ENST00000358896.10	1933	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	25.3820584052769	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-9	True	NA	13	True	CATAAA	-1	NA	68023252	68079320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68023352_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_3745.known	chr1	+	794	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_3	442.752188023955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTCTTTTCCC	4	True	NA	9	True	AATAAA	-14	NA	52056270	52087155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
transcript_37452.known	chr16	-	3177	1	FSM	ENSG00000262160.1	ENST00000571197.1	3177	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGATGTGGGGGTG	8403	False	NA	-67	True	AATAAA	-18	NA	68229145	68225968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_68226000_68229100
transcript_37453.known	chr16	+	2694	6	FSM	ENSG00000103066.13	ENST00000219345.10	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	9.23904756996088	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCTGGCCTACATTCT	-7	True	NA	19	True	AATAAA	-20	NA	68245372	68261058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255765_68255991_68259145
transcript_37454.known	chr16	+	1203	6	FSM	ENSG00000103066.13	ENST00000566188.5	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	22.4374686629308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTGTTGGCCTCTGG	-7	True	NA	NA	False	NA	NA	NA	68245372	68259692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255890_68255991_68259145
transcript_37457.known	chr16	+	6308	12	FSM	ENSG00000103064.15	ENST00000566454.5	6308	12	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	42.2941294795123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	29	False	NA	6	True	AATAAA	-16	NA	68264559	68301819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_37458.known	chr16	+	6255	11	FSM	ENSG00000103064.15	ENST00000219343.11	6255	11	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	25.5765517613301	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	-5	True	NA	6	True	AATAAA	-16	NA	68264525	68301819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_37464.known	chr16	-	4191	5	FSM	ENSG00000103061.13	ENST00000263997.11	4191	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	5.59016994374947	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAGGTAAGACTCAA	-5	True	NA	NA	False	AGTAAA	-18	NA	68310946	68298033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_68301406_68302380_68302502_68304025_68304233_68310334_68310614_68310734
transcript_37469.known	chr16	-	910	3	FSM	ENSG00000103061.13	ENST00000568538.2	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTGACAACAAAATCT	119	False	NA	NA	False	GATAAA	-25	NA	68310822	68303689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_68304233_68310334_68310614_68310734
transcript_37470.nnic	chr16	+	982	2	NIC	ENSG00000103064.15	novel	6308	12	NA	NA	2	518	intron_retention	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATACTTTATATTTGA	-13	True	NA	NA	False	NA	NA	NA	68264517	68275613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68264577_68274690
transcript_37471.known	chr16	+	3753	20	FSM	ENSG00000132600.18	ENST00000675132.1	3753	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	96.7059970296354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCATGAAGATACAATAC	-3	True	NA	-52	True	NA	NA	NA	68311018	68358524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356140_68356216_68356700_68356798_68357053
transcript_37473.known	chr16	+	3738	19	FSM	ENSG00000132600.18	ENST00000441236.3	3738	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	68.3258577663404	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAATCTCAGCAAGTT	-3	True	NA	8	True	ATTAAA	-19	NA	68311018	68358584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37476.nic	chr16	+	2450	19	ISM	ENSG00000132600.18	ENST00000687654.1	4265	21	-25	3593	1	0	5prime_fragment	FALSE	canonical	3	27	junction_1	75.4241504369509	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-28	True	NA	13	True	AATAAA	-18	NA	68310993	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_68311112_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37477.known	chr16	+	4238	19	FSM	ENSG00000132600.18	ENST00000339507.9	4238	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	76.8349401294187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAATTAAAAAAGTTT	2	True	NA	-23	True	AATACA	-9	NA	68311133	68358553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37481.nic	chr16	+	2304	18	NIC	ENSG00000132600.18	novel	4531	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	59.827433500928	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-29	True	NA	13	True	AATAAA	-18	NA	68310992	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37485.nic	chr16	+	2309	18	NIC	ENSG00000132600.18	novel	4265	21	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	70.6511484343072	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-22	True	NA	13	True	AATAAA	-18	NA	68310999	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311112_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37486.nnic	chr16	+	2827	18	FSM	ENSG00000132600.18	ENST00000687558.1	4058	18	-3	1234	2	0	multi-exon	FALSE	canonical	2	7	junction_1	75.1830062518502	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	32	False	NA	13	True	AATAAA	-18	NA	68311115	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311746_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_3749.known	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	450.064439830565	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	-8	True	NA	45	True	NA	NA	NA	52056303	52088418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_37490.known	chr16	+	2091	17	FSM	ENSG00000132600.18	ENST00000449359.7	2091	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	85.8850066949989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	34	True	NA	13	True	AATAAA	-18	NA	68311055	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37494.nic	chr16	+	2217	16	FSM	ENSG00000132600.18	ENST00000691961.1	3416	16	-35	1234	0	0	multi-exon	FALSE	canonical	3	56	junction_11	83.7008960525513	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-29	True	NA	13	True	AATAAA	-18	NA	68310992	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37505.nic	chr16	+	2082	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	76.0214792418725	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-29	True	NA	13	True	AATAAA	-18	NA	68310992	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37511.nic	chr16	+	1986	14	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	101.108822972282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	30	True	NA	13	True	AATAAA	-18	NA	68311051	68357259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68311100_68315896_68316075_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_37516.known	chr16	+	1062	2	FSM	ENSG00000287760.1	ENST00000666035.1	1062	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAGAAAA	1	True	NA	NA	False	NA	NA	NA	68448842	68450002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68449067_68449164
transcript_37520.known	chr16	+	695	5	FSM	ENSG00000184939.16	ENST00000611381.4	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	19.5751756058534	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	13	True	NA	NA	False	NA	NA	NA	68539315	68576040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68539470_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_37521.known	chr16	+	3611	16	FSM	ENSG00000062038.15	ENST00000429102.6	3611	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_15	221.02900764882	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGCCTGGGGAGTGAA	1	True	NA	13	True	ATTAAA	-13	NA	68644992	68699036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698092
transcript_37522.known	chr16	+	4452	16	FSM	ENSG00000062038.15	ENST00000264012.9	4452	16	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_13	87.5992389616866	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTAATTCTGTAAAG	-11	True	NA	5	True	AATAAA	-16	NA	68645309	68700292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_37524.nic	chr16	+	1561	8	ISM	ENSG00000062038.15	ENST00000429102.6	3611	16	280	17482	-28	-838	5prime_fragment	FALSE	canonical	3	791	junction_7	88.3222300812803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGGCGGTGGCTCACA	-3	True	NA	4	True	AATAAA	-14	NA	68645272	68681554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967
transcript_37525.nic	chr16	+	1888	8	ISM	ENSG00000062038.15	ENST00000429102.6	3611	16	280	17155	-28	-511	5prime_fragment	FALSE	canonical	3	791	junction_7	88.3222300812803	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTTCCAGTCTTTGTC	-3	True	NA	25	True	AATAAA	-37	NA	68645272	68681881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967
transcript_37526.nic	chr16	+	1820	5	NIC	ENSG00000062038.15	novel	3611	16	NA	NA	-28	-107	intron_retention	FALSE	canonical	3	859	junction_4	76.3916716664847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	-3	True	NA	NA	False	NA	NA	NA	68645272	68679705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678657_68678761
transcript_37530.known	chr16	+	9789	7	FSM	ENSG00000168807.17	ENST00000336278.9	9754	7	-35	0	-18	0	multi-exon	FALSE	canonical	3	50	junction_6	7.22072634081149	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTTGTTTTTTTTTTC	-29	True	NA	NA	False	AATAAA	-17	NA	69187128	69309052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69187747_69245601_69245816_69260049_69260261_69270142_69270286_69284047_69284245_69299589_69299775_69300831
transcript_37531.nnic	chr16	+	2118	17	NNC	ENSG00000141076.18	novel	2188	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	23	junction_16	214.357032774761	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	-30	True	NA	NA	False	AATAAA	-16	NA	69132595	69169021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167124_69168881
transcript_37532.known	chr16	+	2188	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	72.6858609015536	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	23	True	NA	NA	False	AATAAA	-16	NA	69132648	69169021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_37534.known	chr16	+	2186	17	FSM	ENSG00000141076.18	ENST00000562237.5	2186	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	194.896276500476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	-30	True	NA	NA	False	AATAAA	-15	NA	69132595	69169020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69132690_69133511_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_37541.nic	chr16	+	2080	16	NIC	ENSG00000141076.18	novel	2186	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	221.435578793372	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	-30	True	NA	NA	False	AATAAA	-16	NA	69132595	69169021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_69132690_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_37547.nic	chr16	-	1262	4	NIC	ENSG00000286140.2	novel	2761	3	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_1	78.029908795709	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	442	False	NA	-10	True	AATAAA	-15	NA	69132233	69118009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_69118526_69120106_69120650_69121435_69121494_69132088
transcript_37549.known	chr16	-	1073	4	FSM	ENSG00000168802.14	ENST00000398235.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	139.207279503145	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGACCAAACCCCAATCT	1	True	NA	NA	False	NA	NA	NA	69132146	69119810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132088
transcript_37550.known	chr16	-	2921	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_2	72.8941393772885	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-12	True	NA	-10	True	AATAAA	-15	NA	69132588	69118009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
transcript_37551.known	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	56.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-4	True	NA	-10	True	AATAAA	-15	NA	69132151	69118009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69120650_69121435_69121494_69132088
transcript_37555.known	chr16	+	4106	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_8	32.9698346977961	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	-25	True	NA	NA	False	AATAAA	-19	NA	69311349	69326939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
transcript_37556.known	chr16	-	2996	10	FSM	ENSG00000132604.11	ENST00000254942.8	2996	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	60.8221450898711	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAGTAGCTGTTTAATT	-11	True	NA	-4	True	ATTAAA	-17	NA	69386007	69355566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69357057_69357517_69357562_69361403_69361490_69366806_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
transcript_37560.known	chr16	+	2055	5	FSM	ENSG00000132603.15	ENST00000254940.10	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	28.9946115683587	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGATTGTGGCCTT	-12	True	NA	19	True	AATAAA	-30	NA	69339771	69343106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341179_69341321_69341532
transcript_37565.known	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	204.43798298968	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	13	True	NA	17	True	AATAAA	-28	NA	69339796	69343104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
transcript_37571.known	chr16	+	4262	5	FSM	ENSG00000103018.18	ENST00000307892.13	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	32.889017923921	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	0	True	NA	25	True	AATAAA	-18	NA	69424618	69466264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462429
transcript_37573.known	chr16	+	2492	3	FSM	ENSG00000103018.18	ENST00000514123.5	2492	3	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAAAACTATTGAGC	0	True	NA	NA	False	NA	NA	NA	69424618	69450238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69424858_69447149_69447279_69448114
transcript_37575.known	chr16	+	1588	1	FSM	ENSG00000260772.1	ENST00000561622.1	1588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGCAGTGGATAGCTG	3011	False	NA	3	True	AATAAA	-15	NA	69703064	69704652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69703100_69704700
transcript_37576.known	chr16	-	2521	6	FSM	ENSG00000181019.13	ENST00000320623.10	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_2	37.0599514300815	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	1	True	NA	-3	True	AATAAA	-26	NA	69726560	69709400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69711282_69713027_69713130_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_37577.known	chr16	-	1716	9	FSM	ENSG00000141101.13	ENST00000268802.10	1716	9	0	0	0	0	multi-exon	TRUE	canonical	3	444	junction_4	26.219029348929	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	2	True	NA	-25	True	AATAAA	-15	NA	69754926	69741870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
transcript_37579.nic	chr16	-	1649	8	NIC	ENSG00000141101.13	novel	1716	9	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	159.104637626581	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	3081	False	NA	-25	True	AATAAA	-15	NA	69754990	69741870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69754593_69754727_69754847
transcript_3758.known	chr1	-	5338	25	FSM	ENSG00000154222.15	ENST00000284376.8	5338	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_18	8.2525248661647	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAGTCTTGCTTACAA	-38	True	NA	-2	True	AATAAA	-20	NA	52366205	52350596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52353224_52353517_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
transcript_37584.known	chr16	+	4487	24	FSM	ENSG00000198373.13	ENST00000359154.7	4487	24	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	24.9852130182077	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTGTTGTTGTGGAT	-9	True	NA	14	True	AATAAA	-14	NA	69762331	69941739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
transcript_37587.nic	chr16	+	2555	10	NIC	ENSG00000198373.13	novel	2474	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	61.2761408061797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	NA	False	NA	2	True	AATAAA	-13	NA	69762308	69910250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_69762392_69776188_69776242_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
transcript_37589.nic	chr16	+	2527	9	ISM	ENSG00000198373.13	ENST00000359154.7	4487	24	-48	31489	-44	0	5prime_fragment	FALSE	canonical	3	138	junction_1	36.5476999960326	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	NA	False	NA	2	True	AATAAA	-13	NA	69762283	69910250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
transcript_37597.known	chr16	-	2764	25	FSM	ENSG00000196696.13	ENST00000530079.5	2764	25	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	106.511923889091	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCACACTCCAAAAACAAA	105	False	NA	NA	False	AAGAAA	-44	NA	70065853	69976351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_69976733_69978076_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596_69990684_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
transcript_37599.known	chr16	+	1970	12	FSM	ENSG00000157335.21	ENST00000569347.6	1970	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.16489003373258	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATGCTCATTTCAA	239	False	NA	NA	False	ATTAAA	-17	NA	70174024	70186895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70174403_70174946_70175039_70177240_70177481_70181849_70181948_70182367_70182490_70182646_70182755_70183280_70183374_70183752_70183860_70184493_70184624_70184895_70184993_70185884_70185977_70186482
transcript_376.nic	chr1	-	1063	7	ISM	ENSG00000008128.23	ENST00000460465.5	2333	20	-235	6637	-202	-4910	5prime_fragment	FALSE	canonical	3	22	junction_3	31.6723679078292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	-21	True	NA	NA	False	NA	NA	NA	1724559	1709517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_37600.known	chr16	-	3489	21	FSM	ENSG00000090861.17	ENST00000676212.1	3489	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	291.932029760354	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-18	True	NA	-31	True	AATAAA	-8	NA	70289557	70252304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255719_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_37602.known	chr16	-	3717	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_20	285.914829975642	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGCGTCTTTAAACAA	NA	False	NA	NA	False	NA	NA	NA	70289580	70251982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
transcript_37604.known	chr16	-	3296	20	FSM	ENSG00000090861.17	ENST00000676168.1	3296	20	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_6	284.929043020866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-18	True	NA	-31	True	AATAAA	-8	NA	70289557	70252304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_37607.known	chr16	-	3623	19	FSM	ENSG00000090861.17	ENST00000675371.1	3623	19	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	287.322467999431	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCCTGCTGGCTGC	-18	True	NA	-36	True	AATAAA	-3	NA	70289557	70252309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_37610.known	chr16	+	2923	12	FSM	ENSG00000168872.17	ENST00000302243.12	2923	12	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_1	121.949928757531	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGTGTATATAAAGTGA	14	True	NA	17	True	AATATA	-18	NA	70346902	70373383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361511_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_37616.known	chr16	+	1717	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	185.897821396594	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	-30	True	NA	43	True	AATACA	-19	NA	70299161	70333826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37620.known	chr16	+	1790	9	FSM	ENSG00000157349.17	ENST00000562519.5	1790	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	241.495341569977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAGTGGTGGAAAGGG	4325	False	NA	NA	False	NA	NA	NA	70299141	70333972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37625.known	chr16	+	1692	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	178.443520476368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	2	True	NA	40	True	AATACA	-16	NA	70299193	70333823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37626.known	chr16	+	3275	12	FSM	ENSG00000157349.17	ENST00000288071.11	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_4	115.740590535562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGCAGACTCCCAC	-6	True	NA	104	True	ATTAAA	-26	NA	70299185	70335305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_37627.known	chr16	-	887	3	FSM	ENSG00000261777.6	ENST00000570278.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAAATAATTTTTTTCT	24	True	NA	NA	False	NA	NA	NA	70346747	70333782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70333961_70341939_70342100_70346198
transcript_37629.known	chr16	-	3000	20	FSM	ENSG00000103051.20	ENST00000564415.6	3000	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	121.290795461617	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGCTGTTACCAGG	-12	True	NA	-31	True	AATAAA	-19	NA	70523558	70480567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70515867_70516041_70517625_70517741_70519648_70519732_70523372
transcript_37630.known	chr16	-	2820	19	FSM	ENSG00000103051.20	ENST00000323786.10	2820	19	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_11	34.4364237973489	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTGCTGTTACC	-8	True	NA	-34	True	AATAAA	-16	NA	70523554	70480570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_37634.known	chr16	-	2761	18	FSM	ENSG00000103051.20	ENST00000674443.1	2761	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	97.914128043854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTGCTGTTA	-14	True	NA	-36	True	AATAAA	-14	NA	70523560	70480572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_3764.known	chr1	-	3080	17	FSM	ENSG00000085840.13	ENST00000371566.1	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_16	64.1209489461128	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	81	False	NA	-3	True	ATTAAA	-17	NA	52404387	52372830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402226_52404245
transcript_37640.known	chr16	+	9692	26	FSM	ENSG00000189091.13	ENST00000302516.10	9692	26	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_18	108.99536870895	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCATTTCTTTTTCTT	11	True	NA	5	True	AATAAA	-18	NA	70523815	70577668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_70523929_70526586_70526727_70528872_70529200_70530744_70530918_70532478_70532621_70535307_70535421_70538322_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672
transcript_37649.nnic	chr16	+	2080	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-27205	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	6.35085296108588	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70619353	70660682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_70619813_70646547_70646976_70654537_70654672_70656601_70656680_70656962_70657122_70659617_70659754_70659996
transcript_37652.nnic	chr16	+	1871	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-22676	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	4.6696419087073	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70623882	70660682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_70624130_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_37653.nnic	chr16	+	3376	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-24184	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	6.46572158042361	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70622374	70660682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_70624130_70646547_70646976_70654537_70654672_70656601_70656680_70656962_70657122_70659617_70659754_70659996
transcript_37655.known	chr16	-	4875	3	FSM	ENSG00000180917.18	ENST00000434935.7	4875	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	11	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTTGTAATCTGT	-1	True	NA	NA	False	ATTAAA	-15	NA	71289402	71281391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71285940_71288877_71288938_71289135
transcript_37657.known	chr16	+	1454	11	FSM	ENSG00000172137.19	ENST00000302628.9	1454	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	6.24819974072532	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGTCTAGTGGTC	-2	True	NA	8	True	AATAAA	-28	NA	71358722	71390433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71385576_71385649_71389748
transcript_37658.known	chr16	+	704	10	FSM	ENSG00000172137.19	ENST00000562305.5	704	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.11805216802087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGAGATTGTGCTCTG	69	False	NA	NA	False	NA	NA	NA	71358793	71389826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71389748
transcript_37659.nic	chr16	-	2671	3	ISM	ENSG00000261348.2	ENST00000567469.2	1211	6	12	41354	12	-41354	5prime_fragment	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71426452	71408286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_71410535_71414864_71414996_71426160
transcript_37660.known	chr16	-	3206	6	FSM	ENSG00000157429.16	ENST00000288177.10	3206	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.31026675299883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGTTGTACAACTTGAA	0	True	NA	NA	False	AATAAA	-19	NA	71489324	71473582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71476273_71478227_71478342_71478878_71479006_71482081_71482144_71484588_71484749_71489271
transcript_37662.known	chr16	-	1947	5	FSM	ENSG00000157429.16	ENST00000569717.5	1947	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	6.04152298679729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGAGTTAGGTTTTCT	7	True	NA	-2	True	AATAAA	-34	NA	71484613	71474748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71476273_71478227_71478342_71478878_71479101_71482081_71482144_71484588
transcript_37664.known	chr16	-	2612	5	FSM	ENSG00000157429.16	ENST00000565637.5	2612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.64852927038918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGTTTATTCAGTT	22	False	NA	NA	False	ACTAAA	-22	NA	71489314	71474378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71476273_71478227_71478342_71478878_71479006_71484588_71484749_71488997
transcript_37665.nnic	chr16	-	1896	4	NIC	ENSG00000157429.16	novel	1947	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	7.84573486395988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGAGTTAGGTTTTCT	-4	True	NA	-2	True	AATAAA	-34	NA	71484624	71474748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_71476273_71478227_71478342_71478878_71479101_71484588
transcript_37667.known	chr16	-	2799	7	FSM	ENSG00000167377.19	ENST00000497160.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.1614166717532	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-13	True	NA	5	True	AATAAA	-23	NA	71462246	71447596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449883_71450589_71450716_71453242_71453351_71454041_71454169_71456071_71456122_71456763_71456829_71462209
transcript_3767.nnic	chr1	-	3080	16	NIC	ENSG00000085840.13	novel	3121	17	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	69.0949748936604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	NA	False	NA	-3	True	ATTAAA	-17	NA	52404492	52372830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
transcript_37672.known	chr16	-	3677	12	FSM	ENSG00000261611.6	ENST00000561908.1	3677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	19.2306573423318	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTATGAGTACATTTTT	25	False	NA	2	True	AATAAA	-20	NA	71489311	71447599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456071_71456122_71456763_71456829_71462209_71462371_71463545_71463649_71478227_71478342_71478878_71479006_71482081_71482144_71484588_71484749_71488997
transcript_37675.nic	chr16	-	3176	5	NIC	ENSG00000167377.19	novel	2627	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_3	19.4084388862165	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-12	True	NA	5	True	AATAAA	-23	NA	71462245	71447596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763_71456829_71461658
transcript_37676.nic	chr16	-	2627	5	FSM	ENSG00000167377.19	ENST00000647773.2	2627	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	19.615045245933	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-14	True	NA	5	True	AATAAA	-23	NA	71462247	71447596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763_71456829_71462209
transcript_37679.known	chr16	-	3186	5	FSM	ENSG00000167377.19	ENST00000357254.8	3186	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	21.6794833886788	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	NA	False	NA	5	True	AATAAA	-23	NA	71462759	71447596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456763_71456829_71462209
transcript_37682.known	chr16	-	2358	3	FSM	ENSG00000167377.19	ENST00000539742.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATGAAAAATAAAGAT	-19	True	NA	-34	True	NA	NA	NA	71462252	71447635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71449886_71456763_71456829_71462209
transcript_37683.known	chr16	-	2589	4	ISM	ENSG00000167377.19	ENST00000647773.2	2627	5	5419	0	0	0	3prime_fragment	FALSE	canonical	3	14	junction_3	19.7989898732233	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	5405	False	NA	5	True	AATAAA	-23	NA	71456828	71447596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763
transcript_37685.known	chr16	+	2412	3	FSM	ENSG00000140835.10	ENST00000338482.5	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTTCTTTCTTGTGT	NA	False	NA	NA	False	AATAGA	-13	NA	71525232	71538746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71525365_71526119_71526313_71536659
transcript_37687.known	chr16	+	2159	2	FSM	ENSG00000140835.10	ENST00000539698.4	2159	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTTTCTTGTGTGA	-7	True	NA	NA	False	AATAGA	-15	NA	71526425	71538748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71526496_71536659
transcript_37689.known	chr16	+	683	3	FSM	ENSG00000260886.2	ENST00000666821.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACCACCACTTTGAGA	7	True	NA	NA	False	AATAAA	-13	NA	71564969	71572426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71565095_71566050_71566202_71572019
transcript_3769.known	chr1	-	2152	3	FSM	ENSG00000134744.14	ENST00000355809.4	2152	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	11	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAATAAAACTATTGAC	451	False	NA	NA	False	NA	NA	NA	52552994	52514777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52516055_52525562_52526374_52552930
transcript_37690.known	chr16	-	3593	24	FSM	ENSG00000166747.13	ENST00000393512.7	3593	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	43.9945433976904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATGGAGTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71809201	71732384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71767876_71767886_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_37691.known	chr16	-	6602	23	FSM	ENSG00000166747.13	ENST00000299980.9	6602	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_22	19.6750460740637	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	-9	True	NA	0	True	AATAAA	-25	NA	71808834	71728999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_37692.known	chr16	+	1962	11	FSM	ENSG00000182149.21	ENST00000541571.6	1962	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	341.243314952835	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTCTGTTGATCCTG	9519	False	NA	NA	False	NA	NA	NA	71893933	71927973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71894482_71894720_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_37697.known	chr16	+	2356	10	FSM	ENSG00000182149.21	ENST00000329908.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	275.531316138183	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTACTGTTTGGTCA	17	True	NA	31	True	AATAAA	-21	NA	71895542	71929010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924772_71924818_71927613
transcript_37698.nnic	chr16	+	2345	10	NNC	ENSG00000182149.21	novel	4561	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	283.820670211854	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTGCTTTCTCTACTG	-18	True	NA	23	True	AATAAA	-13	NA	71895507	71929002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924810_71924818_71927613
transcript_377.nic	chr1	-	1033	7	ISM	ENSG00000008128.23	ENST00000358779.9	2419	20	-235	6637	-202	-4910	5prime_fragment	FALSE	canonical	3	24	junction_3	31.0523751104485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	-21	True	NA	NA	False	NA	NA	NA	1724559	1709517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_37707.known	chr16	+	2255	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	264.963411389195	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	27	True	NA	29	True	AATAAA	-19	NA	71895552	71929008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
transcript_37715.known	chr16	-	1187	9	FSM	ENSG00000102984.15	ENST00000563878.5	1187	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	19.7954382371293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGATATTGCCTTTAGTC	6	True	NA	NA	False	NA	NA	NA	71884158	71860597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867892_71868038_71879906_71880024_71881316_71881435_71883210_71883274_71883907
transcript_37719.known	chr16	-	1987	8	FSM	ENSG00000102984.15	ENST00000425432.6	1987	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	16.9873902813654	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	-18	True	NA	-10	True	AATAAA	-16	NA	71884182	71859684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867911_71868038_71879906_71880024_71883210_71883274_71883907
transcript_3772.known	chr1	+	5233	10	FSM	ENSG00000134748.13	ENST00000257181.10	5233	10	0	0	0	0	multi-exon	TRUE	canonical	3	384	junction_3	28.4752437421146	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGTTGGGAGTTAAAA	-5	True	NA	NA	False	AATAAA	-26	NA	52404601	52420836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52404880_52405679_52405840_52408568_52408691_52411114_52411201_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_37724.known	chr16	+	445	2	FSM	ENSG00000224470.9	ENST00000565676.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTAAAAGAAAGCACAAAG	77	False	NA	NA	False	NA	NA	NA	71846068	71848418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71846105_71848009
transcript_37725.known	chr16	+	542	6	FSM	ENSG00000182149.21	ENST00000539186.5	542	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	372.654478035619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATTGCAAAGAATTAC	63	False	NA	NA	False	NA	NA	NA	71895588	71921400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_71895617_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342
transcript_37728.known	chr16	+	4669	9	FSM	ENSG00000102967.12	ENST00000219240.9	4669	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	20.3004772111396	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTCTGTGACTTACTT	-6	True	NA	13	True	AATATA	-14	NA	72008743	72027659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123_72021312_72022361_72022476_72023164_72023319_72023473_72023634_72024144
transcript_37731.known	chr16	+	607	5	FSM	ENSG00000102967.12	ENST00000574309.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	75.2429398681365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTCAGGCAAGCCTTT	19	False	NA	NA	False	NA	NA	NA	72008768	72024238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72024144
transcript_37732.known	chr16	+	4323	27	FSM	ENSG00000140829.12	ENST00000268482.8	4323	27	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	37.4117699734239	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTCTGACTTTTTCC	33	True	NA	22	True	AATAAA	-22	NA	72093846	72112912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_37733.known	chr16	-	3427	21	FSM	ENSG00000118557.16	ENST00000237353.15	3427	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.35287261472237	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGGTGAGCTGTTG	-5	True	NA	NA	False	AATAAA	-19	NA	72172155	72119096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_72119355_72119850_72120090_72122913_72122989_72123545_72123650_72124766_72124935_72125237_72125406_72125967_72126133_72128656_72128795_72129065_72129234_72130212_72130358_72130532_72130723_72132747_72132992_72136447_72136606_72136692_72136820_72139288_72139400_72140411_72140583_72150607_72150830_72154210_72154460_72164763_72164917_72171196_72171269_72172053
transcript_37735.known	chr16	+	1187	5	FSM	ENSG00000257017.10	ENST00000565574.5	1187	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.1650635094611	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCATTGCTGAGTCAA	1	True	NA	NA	False	NA	NA	NA	72054628	72061009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_72054658_72056160_72056244_72056529_72056632_72057391_72057467_72060111
transcript_37738.nnic	chr16	-	935	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	30.6521704868604	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-4	True	NA	-4	True	AATAAA	-17	NA	72093661	72084856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
transcript_37740.known	chr16	-	2521	4	FSM	ENSG00000140830.9	ENST00000268483.8	2521	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.05536398239638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	2	True	NA	-4	True	AATAAA	-17	NA	72093620	72084856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_72086803_72088986_72089139_72090617_72090787_72093366
transcript_37742.nic	chr16	+	640	3	ISM	ENSG00000140829.12	ENST00000268482.8	4323	27	-2	16000	-2	0	5prime_fragment	FALSE	canonical	3	130	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGGGAACATGGTGTCTA	31	True	NA	NA	False	NA	NA	NA	72093844	72096912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_72094052_72096138_72096481_72096821
transcript_37745.nnic	chr16	+	598	2	NNC	ENSG00000140829.12	novel	2258	12	NA	NA	3596	0	intron_retention	FALSE	canonical	3	15	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCATGTCTGACTTTT	-15	True	NA	19	True	AATAAA	-19	NA	72112225	72112909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_72112327_72112412
transcript_3775.known	chr1	+	1059	8	FSM	ENSG00000134748.13	ENST00000474048.1	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	147.989381858487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGTAGTTTAGTTTTT	21	False	NA	33	True	ATTAAA	-22	NA	52404627	52417022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52404880_52405679_52405714_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_37750.known	chr16	-	436	7	FSM	ENSG00000261008.8	ENST00000655530.1	436	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.55902698029904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-3	True	NA	NA	False	AATAAA	-27	NA	72664977	72521007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_72521042_72522552_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_37753.known	chr16	-	1984	6	FSM	ENSG00000261008.8	ENST00000659470.1	1984	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	5.91269819963779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-40	False	NA	NA	False	AATAAA	-27	NA	72665014	72521007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_37755.nnic	chr16	+	777	5	NNC	ENSG00000259768.7	novel	2409	5	NA	NA	-2	-9380	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	5.71729831301464	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATTCAGTCTGTTCTA	-16	True	NA	NA	False	AATAAA	-21	NA	72665130	72812312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_72665334_72713332_72713417_72713946_72713990_72745404_72745467_72811927
transcript_37757.nnic	chr16	+	734	4	NNC	ENSG00000259768.7	novel	2409	5	NA	NA	-2	-9380	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	6.59966329107444	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATTCAGTCTGTTCTA	-16	True	NA	NA	False	AATAAA	-21	NA	72665130	72812312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_72665334_72713332_72713417_72745404_72745467_72811927
transcript_37762.known	chr16	+	1395	8	FSM	ENSG00000103035.11	ENST00000568717.1	1395	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	906.733833546515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGAATGGAGACTGAT	0	True	NA	117	True	NA	NA	NA	74296819	74305888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74296989_74299575_74299746_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_37768.known	chr16	+	1631	7	FSM	ENSG00000103035.11	ENST00000219313.9	1631	7	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_2	152.942708954112	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTAGTCGTTTTT	-6	True	NA	25	True	ATTAAA	-16	NA	74296813	74306288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_37774.known	chr16	+	931	6	FSM	ENSG00000103035.11	ENST00000568615.2	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_2	161.477676475728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGTGTCCTTCTCAAC	9	True	NA	NA	False	AATAAA	-18	NA	74296828	74304709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302
transcript_37779.known	chr16	+	1428	7	FSM	ENSG00000196436.9	ENST00000429990.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.7938424357067	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAAACA	-32	NA	74377877	74392080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_74378040_74381515_74381699_74385341_74385442_74385553_74385750_74389824_74389886_74389994_74390031_74391390
transcript_37780.known	chr16	-	8261	27	FSM	ENSG00000090863.12	ENST00000205061.9	8261	27	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	120.776708489714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGTGGTGACTGGG	-8	True	NA	-1	True	AATAAA	-27	NA	74607114	74447426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_37781.known	chr16	-	9287	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_8	41.4976818629668	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTGTTAAATCTTCTC	-8	True	NA	-14	True	AATAAA	-14	NA	74607114	74447439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_37783.known	chr16	-	3033	14	FSM	ENSG00000168411.14	ENST00000571750.5	3033	14	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_13	80.9098409766322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTGTCCGGTTTA	7	True	NA	NA	False	NA	NA	NA	74666870	74623428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74664623_74664746_74666785
transcript_37784.known	chr16	-	4948	13	FSM	ENSG00000168411.14	ENST00000361070.9	4948	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	57.680152565679	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	0	True	NA	-13	True	AATAAA	-15	NA	74666877	74621398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74666785
transcript_37788.known	chr16	-	2477	11	FSM	ENSG00000168404.13	ENST00000308807.12	2477	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	2.37486841740758	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTGGTTTTTTAC	24	True	NA	2	True	AATAAA	-22	NA	74700862	74671854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74672539_74674959_74675101_74675354_74675405_74675612_74675765_74678898_74678981_74682650_74682787_74685485_74685584_74691276_74691464_74692341_74692417_74695297_74695760_74700452
transcript_37789.known	chr16	-	5878	26	FSM	ENSG00000103091.15	ENST00000262144.11	5878	26	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_11	29.3284844477174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTGTTTGTTTATTTG	-10	True	NA	NA	False	AATAGA	-18	NA	74985123	74871361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_37791.known	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	29.7363414023985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	30	True	NA	0	True	ATTAAA	-18	NA	74985083	74908732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_37794.nic	chr16	-	1587	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-52	3385	-12	0	5prime_fragment	FALSE	canonical	3	184	junction_2	14.4201535498887	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATGAGATTCGGAAGT	-22	True	NA	-10	True	AGTAAA	-17	NA	74985135	74912117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_37797.nnic	chr16	+	615	5	NNC	ENSG00000186187.12	novel	2046	2	NA	NA	-375	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	210.478027356777	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATATAAAAA	NA	False	NA	-5	True	TTTAAA	-9	NA	74998648	75108004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_74998700_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_37799.known	chr16	+	4626	5	FSM	ENSG00000186187.12	ENST00000335325.9	4626	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	23.6259920426635	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCAGGTTGGTGTAAC	-16	True	NA	NA	False	NA	NA	NA	74999023	75110994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75000096_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_3780.known	chr1	+	1229	3	FSM	ENSG00000116157.6	ENST00000361314.5	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	2.5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATAGTCTCCCTCCC	-11	True	NA	11	True	AATAAA	-20	NA	52602370	52609051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52602548_52606683_52606946_52608261
transcript_37802.known	chr16	-	2007	11	FSM	ENSG00000166816.15	ENST00000450168.3	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	16.0374561573836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTGGAAGTCAGCAGG	4	True	NA	-9	True	AATAAA	-29	NA	75116780	75111863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_37803.known	chr16	-	2067	11	FSM	ENSG00000166816.15	ENST00000300051.8	2067	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	26.0315193563495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAGTCAGCAGGCAGC	17	True	NA	-5	True	AATAAA	-33	NA	75116767	75111859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_37805.known	chr16	+	560	5	FSM	ENSG00000184517.12	ENST00000563356.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.7689015585056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGACAAGTACCTTAT	-26	True	NA	NA	False	NA	NA	NA	75148493	75169402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75148644_75152908_75152967_75157136_75157212_75166769_75166897_75169252
transcript_37806.known	chr16	+	3287	4	FSM	ENSG00000184517.12	ENST00000570010.6	3287	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	2.05480466765633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTTTGTATATG	4	True	NA	9	True	AATAAA	-15	NA	75148523	75172234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75148644_75152908_75152967_75166769_75166897_75169252
transcript_37808.known	chr16	+	3250	4	FSM	ENSG00000184517.12	ENST00000393430.6	3250	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	25.7725090401036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTTTGTATATGAT	62	False	NA	11	True	AATAAA	-17	NA	75148581	75172236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75148663_75152908_75152967_75166769_75166897_75169252
transcript_37811.known	chr16	+	3067	4	FSM	ENSG00000184517.12	ENST00000464850.5	3067	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	28.7672653471886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTATTTTTTGGTAA	7	True	NA	-86	True	AATAAA	-36	NA	75148526	75172000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75148644_75152908_75152967_75166769_75166914_75169252
transcript_37812.known	chr16	-	4084	1	FSM	ENSG00000280152.1	ENST00000624205.1	4084	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1795	False	NA	NA	False	AATAGA	-16	NA	75250077	75245993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75246000_75250100
transcript_37819.known	chr16	-	1293	7	FSM	ENSG00000153774.9	ENST00000283882.4	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	87.1022706681953	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTCGCTCACCTTCCCT	-38	True	NA	-7	True	AATAAA	-41	NA	75433503	75293709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75294043_75305023_75305183_75395089_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_37832.known	chr16	-	1167	5	FSM	ENSG00000153774.9	ENST00000566901.5	1167	5	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	55.1333610439269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	75433461	75394681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_37834.known	chr16	-	608	4	FSM	ENSG00000153774.9	ENST00000565646.5	608	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	379.134394230976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAATGTTCCTTCAGCTC	-8	True	NA	NA	False	AAGAAA	-8	NA	75433473	75395134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75433288
transcript_37838.nic	chr16	-	2276	3	NIC	ENSG00000166822.13	novel	2331	3	NA	NA	0	14	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	32	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGTCAGGAGGACCA	14	True	NA	20	True	NA	NA	NA	75464416	75445699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_75447689_75451737_75451840_75464231
transcript_37839.known	chr16	-	4959	3	FSM	ENSG00000166822.13	ENST00000357613.8	4959	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	38	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	0	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75447689_75451737_75451840_75464467
transcript_37840.known	chr16	-	2331	3	FSM	ENSG00000166822.13	ENST00000569540.5	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	46	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	14	True	NA	6	True	NA	NA	NA	75464416	75445713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75447689_75451668_75451840_75464231
transcript_37841.known	chr16	-	5028	3	FSM	ENSG00000166822.13	ENST00000561878.2	5028	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	24	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	0	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75447689_75451668_75451840_75464467
transcript_37845.known	chr16	-	547	3	FSM	ENSG00000166822.13	ENST00000566980.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	47.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTCATGTGTACCTTT	NA	False	NA	NA	False	AAAACA	-40	NA	75464737	75447309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75447689_75451737_75451840_75464671
transcript_37854.known	chr16	+	2557	1	FSM	ENSG00000274220.1	ENST00000621929.1	2557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGCGGTGGCTCACACT	970	False	NA	NA	False	AATGAA	-15	NA	75433835	75436392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75433800_75436400
transcript_37855.known	chr16	-	1869	11	FSM	ENSG00000065457.11	ENST00000307921.7	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	18.1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGACTTCCATTGTGT	-25	True	NA	NA	False	NA	NA	NA	75623300	75600001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402_75622465_75623237
transcript_37859.known	chr16	-	5757	10	FSM	ENSG00000065457.11	ENST00000564657.2	5757	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	9.11652955411823	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTTTTGTTTATCC	-6	True	NA	-26	True	AATAAA	-16	NA	75623281	75596867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402
transcript_3786.known	chr1	-	908	3	FSM	ENSG00000162377.6	ENST00000486918.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	135.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAGCCTACAATGTTT	276	False	NA	-55	True	NA	NA	NA	52698068	52687561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52688169_52692726_52692868_52697908
transcript_37860.known	chr16	-	2768	10	FSM	ENSG00000065457.11	ENST00000566445.5	2768	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	25.9933514766306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	809	False	NA	NA	False	NA	NA	NA	75622466	75599099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618699_75620265_75620335_75620630_75620821_75622402
transcript_37865.known	chr16	-	4247	7	FSM	ENSG00000205084.12	ENST00000258173.11	4247	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	9.17726659862414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTGGTTTATTTCCT	-6	True	NA	-2	True	TATAAA	-17	NA	75556252	75536740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803_75555974_75556070
transcript_37866.known	chr16	-	2991	7	FSM	ENSG00000205084.12	ENST00000562410.5	2991	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	24.8109518828547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTCAAAATGGAAG	-22	True	NA	-23	True	AATAAA	-13	NA	75556268	75538135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75546078_75555803_75555974_75556070
transcript_3787.known	chr1	-	3988	3	FSM	ENSG00000162377.6	ENST00000371538.5	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	19.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGCCTCATATCCCA	-3	True	NA	-15	True	ATTAAA	-8	NA	52698347	52684448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52688169_52692726_52692868_52698220
transcript_37870.known	chr16	+	974	4	FSM	ENSG00000034713.8	ENST00000037243.7	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_1	39.1606378338703	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	-10	True	NA	NA	False	AATAAA	-19	NA	75566378	75577881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75566521_75566851_75566908_75568036_75568210_75577278
transcript_37871.known	chr16	+	791	3	FSM	ENSG00000034713.8	ENST00000563744.1	791	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	306.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	0	True	NA	NA	False	AATAAA	-19	NA	75566388	75577881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75566521_75566851_75566908_75577278
transcript_37873.known	chr16	+	668	1	FSM	ENSG00000276408.1	ENST00000621911.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTGTGTGTGTGCCTTT	990	False	NA	NA	False	GATAAA	-18	NA	75556391	75557059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_75556400_75557100
transcript_37882.known	chr16	-	1991	14	FSM	ENSG00000065427.15	ENST00000302445.8	1991	14	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_13	107.518541128452	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTCTCTTCTCTTT	-7	True	NA	-49	True	ATTAAA	-30	NA	75647665	75627723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75647577
transcript_37898.known	chr16	-	649	6	FSM	ENSG00000065427.15	ENST00000566249.5	649	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	341.634658663315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCACTTATCACAACGAG	1035	False	NA	NA	False	NA	NA	NA	75647607	75634240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75647577
transcript_379.known	chr1	-	2078	7	FSM	ENSG00000215790.8	ENST00000647043.1	2078	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	66.6418703885845	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCCCTGCTTTGTTT	151	False	NA	NA	False	AATAAA	-22	NA	1745919	1724837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1725423_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
transcript_37902.known	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	357.079707011983	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	10	True	NA	-95	True	NA	NA	NA	75647648	75627769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
transcript_37903.known	chr16	-	2421	15	FSM	ENSG00000065427.15	ENST00000319410.9	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_14	281.999963815311	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTCTGGTGGTGG	-7	True	NA	NA	False	AGTAAA	-3	NA	75647665	75627473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75644282_75644463_75647577
transcript_37904.known	chr16	+	5813	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	9.21737489744233	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	-9	True	NA	14	True	AATAAA	-15	NA	77191189	77202398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
transcript_37907.known	chr16	+	1057	11	FSM	ENSG00000205078.6	ENST00000378644.5	1057	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.1720256084048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACAGGGGCCGGAGGG	-18	True	NA	NA	False	NA	NA	NA	77199407	77213215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77199513_77206440_77206501_77208209_77208270_77208464_77208540_77209096_77209145_77209416_77209472_77211212_77211277_77212129_77212200_77212281_77212370_77212573_77212647_77212856
transcript_37908.known	chr16	+	598	2	FSM	ENSG00000205078.6	ENST00000568925.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACAGGGGCCGGAGGG	89	False	NA	NA	False	NA	NA	NA	77212407	77213215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77212647_77212856
transcript_37909.nnic	chr16	+	1282	6	NNC	ENSG00000140876.11	novel	899	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	40.485058972416	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGTGGCATTTACCT	-1	True	NA	NA	False	AATAAA	-16	NA	77722478	77742257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77737393_77737454_77741581
transcript_3791.known	chr1	-	455	1	FSM	ENSG00000228929.1	ENST00000437890.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGTGTACTCAAGC	27	False	NA	NA	False	NA	NA	NA	52772648	52772193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52772200_52772600
transcript_37911.known	chr16	+	899	5	FSM	ENSG00000140876.11	ENST00000564085.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	38.989581941847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATTCACGAGGATT	-11	True	NA	NA	False	CATAAA	-41	NA	77722513	77741969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77741581
transcript_37912.known	chr16	+	1096	4	FSM	ENSG00000140876.11	ENST00000268533.9	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	38.8529993122224	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGCATTTACCTTAT	-11	True	NA	NA	False	AATAAA	-19	NA	77722513	77742260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77741581
transcript_37915.known	chr16	+	678	3	FSM	ENSG00000140876.11	ENST00000568787.5	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	32	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAGATGCTTCAGAATT	-9	True	NA	NA	False	NA	NA	NA	77722515	77736249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77735827
transcript_37916.known	chr16	+	930	3	FSM	ENSG00000140876.11	ENST00000437314.3	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	41.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	-6	True	NA	NA	False	AATAAA	-17	NA	77722518	77742258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77722618_77725430_77725585_77741581
transcript_37918.known	chr16	+	3791	9	FSM	ENSG00000171724.3	ENST00000302536.3	3791	9	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	18.0238557195734	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	0	True	NA	24	True	AATAAA	-24	NA	77788563	77980107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77884607_77884803_77971849_77971934_77977596
transcript_37919.nic	chr16	+	2649	2	ISM	ENSG00000171724.3	ENST00000302536.3	3791	9	183232	0	109048	0	3prime_fragment	FALSE	canonical	3	144	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	NA	False	NA	24	True	AATAAA	-24	NA	77971795	77980107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_77971934_77977596
transcript_37920.nnic	chr16	+	2434	6	Fusion	ENSG00000276007.1_ENSG00000186153.18	novel	2447	6	NA	NA	-3	-2	multi-exon	FALSE	canonical	0	0	junction_5	43.2823289576705	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGCGATTCTGGGAAT	5	True	NA	11	True	AATAAA	-11	NA	78099690	78124330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78118954_78120295_78123733
transcript_37921.known	chr16	+	710	6	FSM	ENSG00000186153.18	ENST00000355860.7	710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.7513636103576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACATCTTCTTTTGTGG	-7	True	NA	NA	False	AATAAA	-21	NA	78099678	78278696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78164182_78164290_78278602
transcript_37923.known	chr16	+	448	4	FSM	ENSG00000186153.18	ENST00000565562.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	38.9101529166874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGTTCGGGGCCACTAC	48	False	NA	NA	False	GATAAA	-13	NA	78099733	78111992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78111819
transcript_37924.nic	chr16	+	296	2	ISM	ENSG00000186153.18	ENST00000565562.5	448	4	-106	3532	2	-3532	5prime_fragment	FALSE	canonical	3	93	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAAAAAGAAAACGAGTG	207	False	NA	8	True	NA	NA	NA	78099627	78108460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_78099886_78108422
transcript_37925.known	chr16	+	525	1	FSM	ENSG00000186153.18	ENST00000569818.1	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCAGCTCCCTCCTGC	-11	True	NA	23	True	AATAAA	-19	NA	78099674	78100199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_78099700_78100200
transcript_37926.known	chr16	-	1217	2	FSM	ENSG00000178573.7	ENST00000569649.1	1217	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTCCTTTTCT	834	False	NA	NA	False	NA	NA	NA	79599902	79585842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_79585942_79598784
transcript_37927.known	chr16	-	2669	2	FSM	ENSG00000178573.7	ENST00000326043.5	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCTGTGTGATTTTTT	-1	True	NA	NA	False	AATACA	-17	NA	79600737	79593837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_79594554_79598784
transcript_3793.nnic	chr1	-	1681	11	NNC	ENSG00000121310.17	novel	1606	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	52.4347213208958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	9	True	NA	-28	True	ATTAAA	-6	NA	52921738	52896231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52912022_52912753_52912864_52913894_52914096_52921552
transcript_37930.known	chr16	+	628	4	FSM	ENSG00000168589.15	ENST00000305904.11	628	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGCTCCTTGTGATAA	-13	True	NA	NA	False	AATACA	-22	NA	80540992	80550811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_80541080_80543275_80543352_80549483_80549652_80550514
transcript_37936.known	chr16	+	3928	11	FSM	ENSG00000166451.14	ENST00000305850.10	3928	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	456.452943905503	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	-11	True	NA	28	True	AATAAA	-19	NA	81007213	81031485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_37939.known	chr16	+	1556	11	FSM	ENSG00000166451.14	ENST00000393335.7	1556	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	482.623093106826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACTTGCCTTGAAGCT	-11	True	NA	NA	False	AAAACA	-14	NA	81007213	81033114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81032569
transcript_37944.known	chr16	+	971	10	FSM	ENSG00000166451.14	ENST00000428963.6	971	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	475.671325472267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTTAAGCACAGCTCC	19	True	NA	NA	False	GATAAA	-13	NA	81007243	81028660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_3795.known	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_5	41.3264629893471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	7	True	NA	0	True	AATAAA	-38	NA	52921740	52895909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_37952.known	chr16	+	1398	7	FSM	ENSG00000166451.14	ENST00000299572.9	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_6	178.385739963211	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTGTTTTATACCA	14	True	NA	25	True	AATAAA	-27	NA	81006551	81022885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022754
transcript_37956.known	chr16	-	663	6	FSM	ENSG00000103121.9	ENST00000565613.5	663	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	519.74555313153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAATCCGAAAAATAAATT	-3	True	NA	NA	False	AAGAAA	-17	NA	81006854	80976109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80978241_80978416_80980769_80980880_80981805_80981878_80997313_80997430_81006733
transcript_37960.known	chr16	-	640	6	FSM	ENSG00000103121.9	ENST00000565925.5	640	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	399.513704395732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-24	True	NA	NA	False	AATAAA	-43	NA	81006875	80976049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_37961.known	chr16	-	573	6	FSM	ENSG00000103121.9	ENST00000562713.3	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	395.90221014791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAGAGGAATCCGAAAA	-7	True	NA	NA	False	AAGAAA	-10	NA	81006858	80976116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81001247_81001335_81006733
transcript_37967.nic	chr16	-	864	5	NIC	ENSG00000103121.9	novel	871	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	312	junction_2	419.682841560148	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	209	False	NA	-11	True	AATAAA	-14	NA	81006921	80975801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81006733
transcript_37969.known	chr16	-	801	5	FSM	ENSG00000103121.9	ENST00000570086.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	522.118281618256	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTTTTTTCTCCTTTC	-24	True	NA	-16	True	AATAAA	-9	NA	81006875	80975806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80981805_80981878_80996922_80997021_80997313_80997430_81006733
transcript_37971.known	chr16	-	671	5	FSM	ENSG00000103121.9	ENST00000565650.5	671	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	487.195225243434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAGGGCGTTTAGTAC	236	False	NA	NA	False	NA	NA	NA	81006894	80975927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_37972.nic	chr16	-	822	5	NIC	ENSG00000103121.9	novel	573	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	481.932308524755	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	228	False	NA	-11	True	AATAAA	-14	NA	81006902	80975801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_80976180_80981805_80981878_80997313_80997430_81001247_81001335_81006733
transcript_37975.known	chr16	-	766	4	FSM	ENSG00000103121.9	ENST00000486645.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	498.469880957939	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	235	False	NA	-11	True	AATAAA	-14	NA	81006895	80975801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80980769_80980880_80997313_80997430_81006733
transcript_37976.known	chr16	-	10072	4	FSM	ENSG00000103121.9	ENST00000219400.8	10072	4	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	148.501402911443	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCATTATTTTTT	-34	True	NA	NA	False	ATTAAA	-19	NA	81006885	80966447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_81006733
transcript_37980.known	chr16	-	612	3	FSM	ENSG00000103121.9	ENST00000569187.5	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	399	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTCTCCTTTCTCT	233	False	NA	-13	True	AATAAA	-12	NA	81006897	80975803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80981805_80981878_81006733
transcript_37981.known	chr16	-	399	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	560.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-35	True	NA	NA	False	AATAAA	-43	NA	81006886	80976049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_37983.known	chr16	+	716	1	FSM	ENSG00000261061.1	ENST00000566639.1	716	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	NA	False	NA	28	True	AATAAA	-19	NA	81030769	81031485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81030800_81031500
transcript_37984.known	chr16	+	461	4	FSM	ENSG00000166451.14	ENST00000562943.1	461	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	481.793178310638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTATAATTGTATTGT	NA	False	NA	14	True	AATAAA	-16	NA	81017754	81022874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_81017835_81020099_81020277_81022596_81022653_81022726
transcript_37985.known	chr16	-	1488	7	FSM	ENSG00000166473.17	ENST00000531391.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.77123616632825	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTCTGGGATCTGCT	-3	True	NA	0	True	AATAAA	-16	NA	81181329	81170288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_81170806_81170942_81171075_81174719_81174915_81175604_81175751_81177806_81177984_81179644_81179787_81181150
transcript_3799.nic	chr1	-	1216	10	NIC	ENSG00000121310.17	novel	1606	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	48.5020045404769	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-15	True	NA	-28	True	ATTAAA	-6	NA	52921544	52896231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52913894_52914096_52921482
transcript_37991.known	chr16	-	829	4	FSM	ENSG00000261235.1	ENST00000567021.1	829	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCATCTATCAGGAATA	NA	False	NA	-38	True	NA	NA	NA	82139631	82044370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82044609_82063092_82063254_82070802_82071190_82139588
transcript_37992.known	chr16	-	566	3	FSM	ENSG00000261235.1	ENST00000561826.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTCTCATTTCTCC	NA	False	NA	-3	True	AATAAA	-14	NA	82063222	82044335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82044606_82052292_82052459_82063092
transcript_37998.known	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	17.5356779167502	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-20	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
transcript_38.known	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00108_+_0_1000
transcript_38006.known	chr16	-	619	3	FSM	ENSG00000135698.10	ENST00000569599.5	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACGGAAAAATGTTACT	5	True	NA	NA	False	NA	NA	NA	82170199	82151083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_82151515_82164081_82164195_82170124
transcript_3801.known	chr1	-	1606	10	FSM	ENSG00000121310.17	ENST00000371520.5	1606	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	49.3485962375556	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-7	True	NA	-28	True	ATTAAA	-6	NA	52921703	52896231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52912022_52913894_52914096_52921482
transcript_38011.known	chr16	+	8649	4	FSM	ENSG00000230989.8	ENST00000433866.7	8649	4	0	0	0	0	multi-exon	FALSE	canonical	3	5804	junction_3	326.662244868032	1430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTTATCTTTATTTT	-33	True	NA	NA	False	ATTAAA	-16	NA	83807977	83819737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_83808122_83808679_83808747_83809304_83809426_83811420
transcript_38018.known	chr16	+	1922	6	FSM	ENSG00000140961.14	ENST00000393306.6	1922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.00665927567458	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCGTCTGAGGACTC	0	True	NA	2	True	AATAAA	-17	NA	83953239	83966332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_83953371_83957639_83957739_83959259_83959397_83960568_83960761_83960980_83961073_83965061
transcript_38019.known	chr16	-	4377	23	FSM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_5	23.8124993221405	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTAACGGACTCT	-22	True	NA	-15	True	AATAAA	-27	NA	84116942	84053762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_38022.nic	chr16	-	2192	11	ISM	ENSG00000140943.18	ENST00000343411.8	4377	23	13	27759	13	0	5prime_fragment	FALSE	canonical	3	259	junction_7	16.6541286172528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTGAGTGGTTTTTT	-9	True	NA	NA	False	TATAAA	-14	NA	84116929	84081521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_-_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_38024.known	chr16	+	521	1	FSM	ENSG00000260018.1	ENST00000565382.1	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGGGTGACTTAGAT	3	True	NA	23	True	AATAAA	-36	NA	84117050	84117571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84117000_84117600
transcript_38025.known	chr16	-	1493	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	113.710768570478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGCTGCACTTCA	-6	True	NA	NA	False	NA	NA	NA	84145169	84124122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
transcript_38028.known	chr16	-	3648	6	FSM	ENSG00000103160.12	ENST00000219439.9	3648	6	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_5	25.6093732840146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATAACTATGTGCCT	-14	True	NA	-12	True	ATTAAA	-23	NA	84145177	84122140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84124729_84129547_84129776_84129985_84130432_84131101_84131328_84135543_84135606_84145079
transcript_38036.known	chr16	-	542	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	18	False	84145210	3	True	AATAAA	-30	NA	84145192	84130960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84131328_84135543_84135606_84145079
transcript_38037.nnic	chr16	-	3395	10	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-6	1622	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.6390409747735	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGATGCCTCAGTTAAAAA	NA	False	NA	-9	True	ATTAAA	-20	NA	84504696	84478074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_84479391_84479447_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
transcript_3804.known	chr1	-	1126	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	29.0492577357839	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCTGAGTCTTGGTAT	21	True	NA	-29	True	ATTAAA	-5	NA	52921726	52896232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_38041.nnic	chr16	-	3477	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-6	1647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5176391216864	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCCGTCAGTGTCT	NA	False	NA	16	True	ATTAAA	-45	NA	84504696	84478049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
transcript_38042.nnic	chr16	-	3273	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-6	1622	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.9362875995571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGATGCCTCAGTTAAAAA	NA	False	NA	-9	True	ATTAAA	-20	NA	84504696	84478074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_84479391_84479447_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_38045.nnic	chr16	-	1888	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-6	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5176391216864	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTTATACTTTGTTC	NA	False	NA	-9	True	AAGAAA	-20	NA	84504696	84479638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
transcript_38047.known	chr16	-	5013	8	FSM	ENSG00000140950.16	ENST00000343629.11	5013	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.7851343953503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAAAACTATATTTTG	-12	True	NA	NA	False	ATTAAA	-20	NA	84504659	84476354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_38051.known	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	84.2060963747083	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-2	True	NA	-20	True	AATAAA	-24	NA	84618078	84565595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
transcript_38052.nnic	chr16	-	1637	4	NNC	ENSG00000103187.8	novel	1842	4	NA	NA	-637	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	445.936716985219	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	NA	False	NA	-20	True	AATAAA	-24	NA	84618715	84565595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_84566956_84590104_84590263_84617500_84617584_84618679
transcript_38058.known	chr16	+	3328	14	FSM	ENSG00000103194.16	ENST00000219473.12	3328	14	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_4	163.701163728048	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	5	True	NA	31	True	AATAAA	-21	NA	84699999	84779922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_38070.known	chr16	+	1315	12	FSM	ENSG00000103194.16	ENST00000563048.5	1315	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	421.117423407677	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTGAAACCAACTGCTG	9	True	NA	NA	False	NA	NA	NA	84700003	84779015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733434_84733504_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_38078.nic	chr16	+	1902	8	NIC	ENSG00000103194.16	novel	3070	11	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	538.889333987707	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	NA	False	NA	31	True	AATAAA	-21	NA	84699961	84779922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_84700112_84733434_84733504_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_38080.known	chr16	+	888	5	FSM	ENSG00000103194.16	ENST00000562743.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	706.572492742252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCGGGGCTGATTTT	-9	True	NA	NA	False	NA	NA	NA	84699985	84745211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733052_84733106_84733434_84733504_84740308_84740370_84744632
transcript_38082.nic	chr16	+	571	4	ISM	ENSG00000103194.16	ENST00000219473.12	3328	14	-38	34999	-24	0	5prime_fragment	FALSE	canonical	3	1494	junction_3	79.2590688817374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGTAAAAAGAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	84699961	84744923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632
transcript_38085.known	chr16	+	569	5	FSM	ENSG00000103194.16	ENST00000562283.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	737.203966009408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGTAAAAAGAAGAAAAAG	9	True	NA	NA	False	NA	NA	NA	84700003	84744923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_84700112_84733052_84733106_84733447_84733504_84740308_84740370_84744632
transcript_38086.known	chr16	-	601	3	FSM	ENSG00000270124.1	ENST00000602862.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGTCTACTGTCT	3	True	NA	NA	False	NA	NA	NA	85583571	85580008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_85580230_85582018_85582170_85583342
transcript_38088.known	chr16	-	2628	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	55.9598070046708	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAAGATTTTATTTTT	12	True	NA	-10	True	CATAAA	-23	NA	85688954	85676197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
transcript_38098.known	chr16	+	716	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2370.22629457611	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	7	True	NA	31	True	AATAAA	-19	NA	85799696	85807002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
transcript_38099.known	chr16	+	873	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	2295.4336600085	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	3	True	NA	-7	True	AATGAA	-6	NA	85799692	85807044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
transcript_38100.known	chr16	+	490	5	FSM	ENSG00000131143.10	ENST00000566405.5	490	5	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	2226.43981504104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAAGGTGAACCCCAT	8	True	NA	NA	False	NA	NA	NA	85799697	85806802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_85799753_85801204_85801279_85804940_85805105_85805732_85805865_85806737
transcript_38101.nnic	chr16	+	700	2	Antisense	novelGene_ENSG00000268754.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGGCTCTTC	NA	False	NA	20	True	AATAAA	-22	NA	86278392	86281241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr16_+_86278682_86280830
transcript_38103.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000543303.6	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.8603170684879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	11	True	NA	NA	False	NA	NA	NA	86555203	86531971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554749_86555168
transcript_38104.known	chr16	-	1210	8	FSM	ENSG00000103248.19	ENST00000381214.9	1210	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	14.0494752607363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	11	True	NA	NA	False	NA	NA	NA	86555203	86531971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_38105.known	chr16	-	845	6	FSM	ENSG00000103248.19	ENST00000568037.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.44580418759451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGACCATGTCTTATG	36	False	NA	-7	True	AATAAA	-15	NA	86555178	86547145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_86547569_86548034_86548112_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_38110.known	chr16	-	974	5	FSM	ENSG00000260456.7	ENST00000618367.4	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	13.7545447034789	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGACCTCTGATTTC	10	False	NA	0	True	AATAAA	-35	NA	87317420	87302800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317086
transcript_38111.known	chr16	-	953	5	FSM	ENSG00000260456.7	ENST00000253461.8	953	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	25.8589926331247	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	14	False	NA	-13	True	AATAAA	-22	NA	87317416	87302813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317090
transcript_38112.known	chr16	-	1113	7	FSM	ENSG00000260456.7	ENST00000567970.2	1113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	27.3704016939629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-10	True	NA	-13	True	AATAAA	-22	NA	87317392	87302813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87303076_87305718_87305906_87310296_87310334_87311149_87311297_87314970_87315097_87315771_87315824_87317090
transcript_38113.known	chr16	+	2147	4	FSM	ENSG00000140941.14	ENST00000268607.10	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_2	24.4176620957499	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCCAGTTTAATGGG	5	True	NA	15	True	AATAAA	-21	NA	87392335	87404774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87392468_87398814_87398871_87402174_87402282_87402922
transcript_38115.nic	chr16	-	2073	12	NIC	ENSG00000104731.14	novel	4572	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	32.3707857271806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAATTTCTTTTTAATC	-35	True	NA	NA	False	ACTAAA	-4	NA	87765992	87703025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_87703433_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_38117.known	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	17.0453939392862	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-29	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_38119.known	chr16	-	1757	11	FSM	ENSG00000104731.14	ENST00000562155.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	43.7671109396085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATAAATTGGACTTG	28	True	NA	NA	False	NA	NA	NA	87765929	87707839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87761948_87762041_87765791
transcript_38121.nnic	chr16	-	1614	9	NIC	ENSG00000104731.14	novel	1924	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	41.0791918128875	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCGGAGGGTGTCTT	-35	True	NA	NA	False	AATAAA	-17	NA	87765992	87707812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87761948_87762041_87765791
transcript_38125.known	chr16	+	1551	12	FSM	ENSG00000172530.21	ENST00000479780.6	1551	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	27.0429716201749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGCCCATGGCACCAGG	-23	True	NA	NA	False	NA	NA	NA	87951433	88076661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_38128.known	chr16	+	2164	12	FSM	ENSG00000172530.21	ENST00000355022.8	2164	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	36.4170062897465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	30	True	NA	17	True	AATAAA	-18	NA	87951486	88077318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_38136.known	chr16	+	3705	18	FSM	ENSG00000158545.16	ENST00000301011.10	3705	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	28.5202532297779	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	-1	True	NA	15	True	AATAAA	-16	NA	88570402	88631964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_38137.known	chr16	+	1060	3	FSM	ENSG00000124391.5	ENST00000244241.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGAGGCCAACATTCA	0	True	NA	13	True	ATTAAA	-13	NA	88638571	88640468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88638648_88638980_88639310_88639813
transcript_38138.known	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2382	junction_1	134.6054976589	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-6	True	NA	-4	True	AATAAA	-17	NA	88651053	88643288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
transcript_3814.nic	chr1	-	1140	8	NIC	ENSG00000121310.17	novel	2645	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	38.9022847028557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	-31	True	NA	-19	True	ATTAAA	-15	NA	52921778	52896222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_38142.nic	chr16	-	2065	12	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	11	junction_11	240.348747991657	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	-36	True	NA	-10	True	AATAAA	-15	NA	88663145	88651939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88660519_88660638_88660747_88660842_88663010
transcript_38144.nic	chr16	-	1995	11	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	211.687883451085	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	9006	False	NA	-10	True	AATAAA	-15	NA	88663185	88651939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657145_88657248_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_38152.known	chr16	-	1799	10	FSM	ENSG00000167508.12	ENST00000301012.8	1799	10	0	0	0	0	multi-exon	TRUE	canonical	3	465	junction_4	48.883080463035	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	18	True	NA	-10	True	AATAAA	-15	NA	88663091	88651939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_38163.known	chr16	-	217	2	FSM	ENSG00000167508.12	ENST00000562741.1	217	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGGTTTTTGTGTGA	9030	False	NA	-16	True	AATAAA	-17	NA	88663161	88662101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88662168_88663010
transcript_38164.known	chr16	+	2446	4	FSM	ENSG00000260630.8	ENST00000669434.1	2446	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCAGCTGTCCCCCAT	-13	True	NA	11	True	AGTAAA	-11	NA	88663334	88675484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88673603
transcript_38165.known	chr16	+	1090	4	FSM	ENSG00000260630.8	ENST00000563261.7	1094	4	0	4	0	-4	multi-exon	TRUE	canonical	0	0	junction_3	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCAGTGTCTGGGTCT	NA	False	NA	110	True	CATAAA	-15	NA	88663297	88687278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88686790
transcript_38166.known	chr16	+	588	3	FSM	ENSG00000260630.8	ENST00000569786.6	1136	3	46	502	0	-502	multi-exon	FALSE	canonical	3	5	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGATTGTTTTCTGGT	21	True	NA	NA	False	NA	NA	NA	88663368	88672179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88663401_88671276_88671466_88671812
transcript_38169.known	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_2	5.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-10	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88678630_88681093_88681715_88686330
transcript_38170.known	chr16	+	1905	15	FSM	ENSG00000174177.13	ENST00000567949.5	1905	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	48.9750040368366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	23	True	NA	6	True	AATAAA	-24	NA	88706521	88715386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712060_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_38173.known	chr16	+	1721	15	FSM	ENSG00000174177.13	ENST00000453996.7	1721	15	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	23.6987901180888	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGGGGACGGCAGCGC	4	True	NA	16	True	AATAAA	-34	NA	88706502	88715396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_38176.known	chr16	+	1586	14	FSM	ENSG00000174177.13	ENST00000564105.5	1586	14	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_2	50.0194045186702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGGGGGACTGGCCTCT	-16	True	NA	-60	True	NA	NA	NA	88706482	88715320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88706599_88707135_88707211_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_38181.known	chr16	-	2884	7	FSM	ENSG00000103335.22	ENST00000484567.6	2884	7	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_4	17.2086864370552	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGAGGCCAGTCCCCC	6927	False	NA	-7	True	ATTAAA	-25	NA	88718741	88715345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88715855_88715932_88716120_88716197_88716278_88716360_88716484_88716558_88716732_88716805_88716899_88717022
transcript_38182.known	chr16	+	1672	14	FSM	ENSG00000174177.13	ENST00000312060.9	1672	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	47.9817519554055	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	-16	True	NA	6	True	AATAAA	-24	NA	88706482	88715386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715181
transcript_38185.known	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2079.327941307	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	2	True	NA	-5	True	AGTAAA	-15	NA	88811925	88809468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_38187.known	chr16	-	931	5	FSM	ENSG00000198931.11	ENST00000378364.8	931	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1998.61958611438	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAACCCTCCAGGCACTG	-1	True	NA	NA	False	NA	NA	NA	88811928	88809338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88809841_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_38192.known	chr16	-	542	4	FSM	ENSG00000198931.11	ENST00000568319.5	542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1912.83077023441	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-10	True	NA	-5	True	AGTAAA	-15	NA	88811937	88809468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88809707_88810069_88810149_88811549_88811657_88811819
transcript_38193.known	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2038.97343451715	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-1	True	NA	-5	True	AGTAAA	-15	NA	88811928	88809468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
transcript_38199.known	chr16	+	1084	5	FSM	ENSG00000167515.10	ENST00000565205.5	1084	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	421.829645710208	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGACCATGTGGGTC	-2	True	NA	NA	False	NA	NA	NA	88857130	88861287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860913
transcript_38202.known	chr16	+	801	5	FSM	ENSG00000167515.10	ENST00000568583.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	498.650365988034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGCTGAACAGGTGGG	8	True	NA	NA	False	NA	NA	NA	88857140	88861309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860892
transcript_38203.known	chr16	+	2215	5	FSM	ENSG00000167515.10	ENST00000301021.7	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_4	334.243455433311	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTCTGTTAGG	NA	False	NA	22	True	AATAAA	-29	NA	88857085	88862686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860910
transcript_38206.known	chr16	+	854	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	485.410650892623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	88857085	88861351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
transcript_38207.known	chr16	+	499	4	FSM	ENSG00000167515.10	ENST00000567312.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	455.321376124113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	2	True	NA	28	True	ACTAAA	-16	NA	88857134	88861112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858790_88859892_88859973_88860913
transcript_38208.nic	chr16	+	1476	4	NIC	ENSG00000167515.10	novel	499	4	NA	NA	-8	0	intron_retention	FALSE	canonical	3	917	junction_3	118.974320291771	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	-14	True	NA	28	True	ACTAAA	-16	NA	88857118	88861112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_88857184_88858618_88859751_88859892_88859973_88860913
transcript_3821.known	chr1	+	2759	16	FSM	ENSG00000116171.19	ENST00000371514.8	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	352.117871678726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCTGGACATAATCAC	-9	True	NA	107	True	AATAAA	-30	NA	52927275	53051698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52950754_52950887_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_38210.known	chr16	+	915	5	FSM	ENSG00000167515.10	ENST00000564404.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	534.512102295168	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGGCTTTTTCCTTC	11	True	NA	26	True	ACTAAA	-14	NA	88857143	88861110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860892
transcript_38211.known	chr16	+	4095	11	FSM	ENSG00000176715.17	ENST00000614302.5	4095	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	23.3957261054236	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTCTGGTGCTGAC	3	True	NA	NA	False	ATTAAA	-18	NA	89093851	89156233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_38213.known	chr16	+	2247	10	FSM	ENSG00000176715.17	ENST00000406948.7	2247	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.8506570848124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	-19	True	NA	9	True	AAAACA	-24	NA	89093882	89154589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_38214.known	chr16	+	1541	9	FSM	ENSG00000176715.17	ENST00000378345.8	1541	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	33.990577738544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	-4	True	NA	8	True	AAAACA	-23	NA	89093897	89154588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89093993_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_38218.nic	chr16	+	988	3	ISM	ENSG00000129910.8	ENST00000289746.3	2866	14	21661	0	21642	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGGCGCCCACTGCCAC	3050	False	NA	NA	False	AATGAA	-25	NA	89193408	89195492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89193607_89193754_89193914_89194861
transcript_38219.known	chr16	-	2443	1	FSM	ENSG00000259877.2	ENST00000570267.2	2443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTATAGGAGTTC	-2	True	NA	1	True	ATTAAA	-16	NA	89217653	89215210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89215200_89217700
transcript_38220.known	chr16	-	1584	10	NNC	ENSG00000167522.17	novel	9301	13	NA	NA	1	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	59.4918813840786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGCGAAAGAAAGAAACAA	1187	False	NA	NA	False	AATAAA	-9	NA	89490318	89285174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_-_89285563_89285563_89285650_89286038_89286187_89288527_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317079_89418283_89418369_89490244
transcript_38224.known	chr16	-	2740	6	FSM	ENSG00000167522.17	ENST00000644784.1	2740	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	39.2917294096353	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAAACTTGGTCTTTGT	NA	False	NA	-13	True	AATAAA	-14	NA	89418364	89286668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317076_89418283
transcript_38225.nic	chr16	+	1481	2	ISM	ENSG00000261253.2	ENST00000562995.1	1205	3	1400	195	-691	-8	3prime_fragment	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTATCCTATTAGTGC	2081	False	NA	NA	False	AATAAA	-15	NA	89322532	89324915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89323334_89324235
transcript_38226.known	chr16	+	3384	8	FSM	ENSG00000197912.16	ENST00000645392.1	3384	8	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	33.5662610004603	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGTTGGAAAATCTACA	NA	False	NA	3	True	AATAAA	-3	NA	89542982	89557748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_38230.known	chr16	+	2187	6	FSM	ENSG00000167526.14	ENST00000311528.10	2187	6	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	3343.70971228066	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	9	True	NA	30	True	AATACA	-20	NA	89560681	89564542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_38235.known	chr16	+	712	6	FSM	ENSG00000167526.14	ENST00000567815.5	712	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6817.33034552382	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCCACGTGGTGTGT	8	True	NA	16	True	AATAAA	-38	NA	89560680	89563080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89560713_89560953_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_38236.nic	chr16	+	1673	11	FSM	ENSG00000015413.10	ENST00000690203.1	1631	11	-45	3	-45	0	multi-exon	FALSE	canonical	2	4	junction_5	4.66476151587624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	43	False	NA	3	True	AATAAA	-15	NA	89613596	89638430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_38237.known	chr16	+	1772	9	FSM	ENSG00000015413.10	ENST00000564281.5	1772	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	4.63006479436303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGGCCCGCAATAAAAG	6	True	NA	-29	True	NA	NA	NA	89613672	89638398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637972_89638051
transcript_38240.known	chr16	-	2342	7	FSM	ENSG00000131165.16	ENST00000397901.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_3	35.0463978177501	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-15	True	NA	-7	True	AATAAA	-19	NA	89657708	89644434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_38241.known	chr16	-	2300	7	FSM	ENSG00000131165.16	ENST00000675536.1	2300	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	194.505712569637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCCTAGAATGCTGT	34	True	NA	-55	True	NA	NA	NA	89657659	89644482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649553_89651568_89651647_89653903_89653924_89657581
transcript_38242.known	chr16	-	2330	7	FSM	ENSG00000131165.16	ENST00000535997.7	2330	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	189.290781603331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTGTTGTAAATAAACA	-20	True	NA	-43	True	NA	NA	NA	89657713	89644470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646734_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_38243.known	chr16	-	1845	6	FSM	ENSG00000131165.16	ENST00000675778.1	1845	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	210.70681052116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCGTGGGTGTTAC	0	True	NA	NA	False	NA	NA	NA	89657693	89644769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89651568_89651647_89653903_89653924_89657581
transcript_38244.known	chr16	-	2797	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	38.2591165606317	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	18	True	NA	-7	True	AATAAA	-19	NA	89657675	89644434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_38246.known	chr16	-	2412	7	FSM	ENSG00000131165.16	ENST00000674799.1	2412	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	190.701701326676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTAGAATGCTGTTGTA	-32	True	NA	-51	True	NA	NA	NA	89657725	89644478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89654021_89657581
transcript_38247.nic	chr16	+	1189	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	25	0	intron_retention	FALSE	canonical	3	12	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	NA	False	NA	-4	True	NA	NA	NA	89657764	89661483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89657836_89658247_89658422_89660539
transcript_38248.known	chr16	+	2190	3	FSM	ENSG00000167523.15	ENST00000301031.8	2190	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	33	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAAGC	-15	True	NA	NA	False	NA	NA	NA	89657801	89671267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89657836_89658247_89658422_89669285
transcript_3825.known	chr1	+	1889	15	FSM	ENSG00000116171.19	ENST00000371509.8	1889	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	363.994673654684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATTAGGAACAGTAA	1	True	NA	NA	False	NA	NA	NA	52927285	53050970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_38251.nic	chr16	+	1260	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	5	0	intron_retention	FALSE	canonical	3	12	junction_2	34.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	-10	True	NA	-4	True	NA	NA	NA	89657806	89661483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89657949_89658247_89658422_89660539
transcript_38252.known	chr16	+	1297	3	FSM	ENSG00000167523.15	ENST00000457689.3	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	10	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCCACCCTGTGAG	21	True	NA	NA	False	NA	NA	NA	89657837	89670297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89657949_89658247_89658422_89669285
transcript_38255.known	chr16	+	2368	2	FSM	ENSG00000167523.15	ENST00000565890.1	2368	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTGAAA	12	True	NA	NA	False	NA	NA	NA	89657828	89671272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89658210_89669285
transcript_38258.known	chr16	+	1546	2	FSM	ENSG00000167523.15	ENST00000611218.1	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGGCTCTGCAGAG	-5	True	NA	9	True	AATAAA	-19	NA	89658046	89670456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89658422_89669285
transcript_3826.known	chr1	+	2239	15	FSM	ENSG00000116171.19	ENST00000407246.6	2239	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	363.703491311036	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGATCAGAGCTTGAAC	1	True	NA	-53	True	AATAAA	-4	NA	52927285	53051260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_52927466_52941795_52941854_52950754_52950887_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_38264.nic	chr16	+	1885	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	122.756760393154	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	-19	True	NA	27	True	GATAAA	-16	NA	89686666	89696354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694568_89694789_89694930_89695071_89695292_89695346_89695594
transcript_38266.known	chr16	+	1767	13	FSM	ENSG00000185324.22	ENST00000353379.12	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	77.4078304968058	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	3	True	NA	27	True	GATAAA	-16	NA	89686688	89696354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_38267.nic	chr16	+	1655	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_12	117.337121150981	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	-19	True	NA	27	True	GATAAA	-16	NA	89686666	89696354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_3827.known	chr1	+	1871	2	FSM	ENSG00000235563.1	ENST00000439621.1	1871	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGTGAAATTAGTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	53114575	53118609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53116233_53118395
transcript_38274.nic	chr16	+	1750	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	89.3144802867312	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	-18	True	NA	27	True	GATAAA	-16	NA	89686667	89696354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_38275.known	chr16	+	1424	13	FSM	ENSG00000185324.22	ENST00000505473.5	1424	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_12	124.218529437261	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAGGACAAGAGGGACA	-16	True	NA	NA	False	NA	NA	NA	89686669	89696164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_38287.known	chr16	+	1376	12	FSM	ENSG00000185324.22	ENST00000510811.6	1376	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	115.485536284459	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGGTGGACGCTGGC	5	True	NA	NA	False	NA	NA	NA	89686690	89696038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_38294.known	chr16	+	1703	12	FSM	ENSG00000185324.22	ENST00000505733.5	1703	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	120.88598548882	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	4	True	NA	27	True	GATAAA	-16	NA	89686689	89696354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_38296.nic	chr16	+	2182	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	132	junction_1	90.0010100953418	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	-18	True	NA	27	True	GATAAA	-16	NA	89686667	89696354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694789_89694930_89695071_89695292_89695346_89695594
transcript_3831.known	chr1	-	1102	8	FSM	ENSG00000162384.14	ENST00000294360.5	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	29.2463149606153	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTATCTTCAGTTG	-11	True	NA	-9	True	ATTAAA	-18	NA	53220634	53214098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260_53220345_53220569
transcript_38311.known	chr16	+	2532	11	FSM	ENSG00000185324.22	ENST00000472018.5	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	78.4841385249274	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	14	True	NA	27	True	GATAAA	-16	NA	89686699	89696354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_38326.known	chr16	-	1088	11	FSM	ENSG00000187741.15	ENST00000534992.5	1088	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	64.8448147502944	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCTGCACCAATGTT	-12	True	NA	NA	False	NA	NA	NA	89816655	89798918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89799080_89799171_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_38328.known	chr16	-	1694	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	20.5882622678524	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATAAAGCACTGTGT	8	True	NA	-34	True	ATTAAA	-32	NA	89816635	89798384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_38335.known	chr16	+	2377	19	FSM	ENSG00000141002.20	ENST00000263347.11	2377	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	98.3242305893499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCCGCACCTTCTCCT	-2	True	NA	37	True	TATAAA	-19	NA	89873585	89911384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909084_89910590_89910664_89911079
transcript_38336.nic	chr16	+	2417	19	NIC	ENSG00000141002.20	novel	2377	19	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	60	junction_16	93.1241041053931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	NA	False	NA	32	True	TATAAA	-14	NA	89873564	89911379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909108_89910590_89910664_89911079
transcript_38339.known	chr16	+	2248	18	FSM	ENSG00000141002.20	ENST00000263346.13	2248	18	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_7	36.9005959198324	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	4	True	NA	32	True	TATAAA	-14	NA	89873591	89911379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_38340.nnic	chr16	+	2290	18	NNC	ENSG00000141002.20	novel	2248	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_11	85.6091949270367	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	NA	False	NA	32	True	TATAAA	-14	NA	89873564	89911379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898888_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_38341.nic	chr16	+	2230	18	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	79.9691549532983	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	NA	False	NA	32	True	TATAAA	-14	NA	89873564	89911379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895082_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_38349.nic	chr16	+	2209	17	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	87.4578246570883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	NA	False	NA	32	True	TATAAA	-14	NA	89873564	89911379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_38356.known	chr16	+	1706	4	FSM	ENSG00000258947.8	ENST00000315491.12	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	35.5902608401044	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGCCAGAGATGTCC	-1	True	NA	35	True	AATAAA	-23	NA	89923341	89936097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934728
transcript_38357.known	chr16	+	2688	20	FSM	ENSG00000141002.20	ENST00000640279.1	2688	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	107.374200050874	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTCAATGCAGGCACCA	NA	False	NA	NA	False	NA	NA	NA	89873569	89913627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079_89911251_89912494_89912646_89913231
transcript_38358.known	chr16	+	2111	1	FSM	ENSG00000258839.4	ENST00000555147.2	2111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGCCCCTTCCAGAAAG	-5	True	NA	6	True	AATAAA	-20	NA	89918861	89920972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89918900_89921000
transcript_38359.known	chr16	+	437	3	FSM	ENSG00000141002.20	ENST00000565860.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	201.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	3022	False	NA	32	True	TATAAA	-14	NA	89910292	89911379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89910357_89910590_89910664_89911079
transcript_38360.known	chr16	+	3620	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	163.028861623402	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	-11	True	NA	5	True	ATTAAA	-14	NA	89948754	89968060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_38363.nic	chr16	+	3544	12	NIC	ENSG00000140995.17	novel	3620	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	164.702185526955	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	-32	True	NA	5	True	ATTAAA	-14	NA	89948733	89968060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_38366.known	chr16	+	852	6	FSM	ENSG00000140995.17	ENST00000418391.6	852	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	175.302025088132	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	29	True	NA	NA	False	ATTAAA	-14	NA	89948794	89959366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_38368.nic	chr16	+	1034	6	ISM	ENSG00000140995.17	ENST00000268676.11	3725	13	-37	8694	7	0	5prime_fragment	FALSE	canonical	3	40	junction_2	222.824594692776	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	-28	True	NA	NA	False	ATTAAA	-14	NA	89948737	89959366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89948815_89949416_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_38369.nic	chr16	+	889	6	NIC	ENSG00000140995.17	novel	852	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	190.884886777345	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	-11	True	NA	NA	False	ATTAAA	-14	NA	89948754	89959366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr16_+_89948815_89949419_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_38371.known	chr16	+	516	6	FSM	ENSG00000140995.17	ENST00000566079.5	516	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	242.378711936507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGTGCTCCTTGAGCACC	-11	True	NA	NA	False	NA	NA	NA	89948754	89959039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949419_89949514_89954288_89954377_89955168_89955267_89957510_89957661_89959013
transcript_38372.known	chr16	+	580	6	FSM	ENSG00000140995.17	ENST00000561741.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	248.073859969163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACAAGTGTAACACCAT	9	True	NA	NA	False	NA	NA	NA	89948774	89959097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89949564_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_38373.known	chr16	+	816	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	133.507256357098	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	89948730	89959363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_38375.nic	chr16	+	664	4	ISM	ENSG00000140995.17	ENST00000562986.5	468	5	-27	1606	-3	0	5prime_fragment	FALSE	canonical	3	10	junction_1	243.53690115098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	-14	True	NA	NA	False	ATTAAA	-14	NA	89948751	89959366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89948815_89955168_89955267_89957510_89957661_89959013
transcript_38376.known	chr16	+	535	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	12	True	NA	NA	False	ATTAAA	-13	NA	89958350	89959365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_89958534_89959013
transcript_38377.known	chr16	-	2744	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAAAGCTCATATA	273	False	NA	-25	True	ATTAAA	-17	NA	89972534	89969790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_89969800_89972500
transcript_38378.nic	chr16	+	1315	6	ISM	ENSG00000223959.9	ENST00000557444.5	2447	17	-45	15482	0	485	5prime_fragment	FALSE	canonical	3	26	junction_2	10.1980390271856	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAGACAAAGG	-22	True	NA	NA	False	AAAAAG	-1	NA	89972585	89985186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr16_+_89972766_89977638_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_38380.known	chr16	+	3094	11	FSM	ENSG00000141013.17	ENST00000268699.9	3094	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.8302148655407	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	7	True	NA	14	True	TATAAA	-16	NA	90022679	90044960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_90022725_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_38383.known	chr16	-	2073	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	311.14412523245	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-26	True	NA	-7	True	ATTAAA	-20	NA	90019890	90004870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
transcript_38384.known	chr16	-	1381	4	FSM	ENSG00000222019.7	ENST00000517889.5	1381	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTTCCCACTCAGGTT	NA	False	NA	NA	False	NA	NA	NA	90047773	90042901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047742
transcript_38385.known	chr16	+	1906	4	FSM	ENSG00000260528.6	ENST00000663989.1	1906	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	7.36357401145817	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTGGTCTGTGCTT	4261	False	NA	NA	False	AATAAA	-13	NA	90106528	90120883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr16_+_90106706_90111371_90111486_90116287_90116484_90119464
transcript_38388.nnic	chr17	-	1596	3	NNC	ENSG00000181031.16	novel	2809	9	NA	NA	-134	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	30	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	NA	False	NA	-32	True	ATTAAA	-17	NA	216067	212501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_213924_215653_215803_216042
transcript_38389.nnic	chr17	-	1704	3	NNC	ENSG00000181031.16	novel	2809	9	NA	NA	-35	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	30.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	NA	False	NA	-32	True	ATTAAA	-17	NA	215968	212501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_213924_215653_215916_215948
transcript_38390.known	chr17	-	880	2	FSM	ENSG00000181031.16	ENST00000572965.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCCAGGACCGTGGG	NA	False	NA	NA	False	NA	NA	NA	215933	213323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_213924_215653
transcript_38392.known	chr17	-	2939	7	FSM	ENSG00000141252.21	ENST00000576019.6	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.0657918651588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCGGATTTGTGTGTG	26	True	NA	NA	False	CATAAA	-19	NA	714809	651059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_38395.nic	chr17	-	1043	4	ISM	ENSG00000141252.21	ENST00000681295.1	1264	5	-8	22763	7	620	5prime_fragment	FALSE	canonical	3	52	junction_2	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTTTATAAGTCTT	-12	True	NA	NA	False	NA	NA	NA	714847	696797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_697485_699330_699381_710532_710614_714622
transcript_38396.known	chr17	-	1387	3	FSM	ENSG00000141252.21	ENST00000679865.1	1387	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	26	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTAGTTTCGTGTCTTT	6033	False	NA	NA	False	NA	NA	NA	715281	708140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_708788_710532_710614_714622
transcript_38397.known	chr17	-	1369	3	FSM	ENSG00000141252.21	ENST00000571456.2	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTGATTGTCTTT	21	True	NA	1	True	AATAAA	-14	NA	714814	704999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_706096_710532_710614_714622
transcript_38398.known	chr17	-	2690	2	FSM	ENSG00000141252.21	ENST00000574029.6	2690	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTAGTTTCGTGTCTTT	-4	True	NA	NA	False	NA	NA	NA	714839	708140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_710614_714622
transcript_38399.known	chr17	+	2224	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.6631167472837	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	7	True	NA	5	True	ATTAAA	-19	NA	732595	742968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
transcript_38401.known	chr17	-	3744	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGAGTTATTTCGTCTT	8	True	NA	-10	True	AAAAAG	-25	NA	752264	744420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_748033_752132
transcript_38410.known	chr17	-	2059	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-233	-47	226	multi-exon	FALSE	canonical	3	771	junction_5	28.6792607994	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATGCTATTATACCTT	NA	False	NA	NA	False	NA	NA	NA	782341	759096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
transcript_38415.nnic	chr17	+	968	4	NNC	ENSG00000171861.11	novel	1729	4	NA	NA	-6	1020	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	86.8600406784769	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTCTGGTTCTTTAT	-15	True	NA	6	True	AATAGA	-15	NA	782346	789218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_782693_783082_783328_787964_788133_789009
transcript_38417.known	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	31.2836485510668	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	-9	True	NA	27	True	AATAAA	-23	NA	782352	792509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_782693_783082_783328_787964_788133_791533
transcript_38419.known	chr17	+	572	3	FSM	ENSG00000171861.11	ENST00000571157.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGTCACTTGAGCCCA	198	False	NA	NA	False	NA	NA	NA	782599	788198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_782693_783082_783328_787964
transcript_38422.known	chr17	+	727	3	FSM	ENSG00000171861.11	ENST00000574509.1	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	85.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGATGTAGAAAC	5	True	NA	NA	False	NA	NA	NA	782366	791766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_782693_787964_788133_791533
transcript_38423.known	chr17	+	770	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGTGGGGTTTCACCA	-4	True	NA	NA	False	NA	NA	NA	782357	783517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_782693_783082
transcript_38425.known	chr17	+	3182	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	53.0178167118271	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	2	True	NA	NA	False	ATTAAA	-17	NA	997128	1003671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
transcript_3843.known	chr1	+	2699	5	FSM	ENSG00000157184.7	ENST00000371486.4	2699	5	0	0	0	0	multi-exon	TRUE	canonical	3	218	junction_3	33.7120156620751	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTCTTAATTTCTTTT	0	True	NA	8	True	AATAAA	-19	NA	53196823	53214197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53213263
transcript_38431.known	chr17	-	1818	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	4821.76792150855	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCGCCTCCATCCTTT	-22	True	NA	-17	True	AATAAA	-25	NA	1400220	1344539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
transcript_38432.known	chr17	-	2052	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	9776	junction_2	536.426472128287	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATTATGGATCA	-24	True	NA	-8	True	ATTAAA	-18	NA	1400222	1344274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
transcript_38434.known	chr17	-	540	3	FSM	ENSG00000108953.17	ENST00000575977.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	2	94	junction_1	5299.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTTCCTGCCCTGTTGG	-16	True	NA	NA	False	NA	NA	NA	1400214	1345327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1345500_1364858_1365059_1400046
transcript_38437.known	chr17	-	691	3	FSM	ENSG00000108953.17	ENST00000486241.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	10693	junction_2	361	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCAAACGGCATACATTT	-11	True	NA	-91	True	NA	NA	NA	1400209	1361680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1362009_1364858_1365059_1400046
transcript_38438.known	chr17	-	465	2	FSM	ENSG00000108953.17	ENST00000489287.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	10693	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTTATAATGTTTCTG	-2	True	NA	NA	False	NA	NA	NA	1400200	1364747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1365059_1400046
transcript_38439.known	chr17	-	3675	3	FSM	ENSG00000167193.8	ENST00000398970.5	3675	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	82.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATTTTTCACAA	8	True	NA	2	True	AAAAAG	-4	NA	1456223	1420688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1423651_1436789_1437156_1455876
transcript_3844.known	chr1	-	841	2	FSM	ENSG00000162384.14	ENST00000474227.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACCAAGCAGAGTGG	23	True	NA	NA	False	NA	NA	NA	53220600	53219534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53220345_53220569
transcript_38440.known	chr17	-	3850	3	FSM	ENSG00000167193.8	ENST00000300574.3	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	84	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGAATATTTTTC	-1	True	NA	-2	True	AATAAA	-42	NA	1456232	1420692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1423651_1436619_1437156_1455876
transcript_38444.known	chr17	-	3888	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	162.713559605028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACCAAACAAGCAAAACAT	-7	True	NA	NA	False	NA	NA	NA	1562792	1517717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_38447.nic	chr17	-	1216	12	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	195.4333180862	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTTTGTGATGTGGT	55	False	NA	-25	True	NA	NA	NA	1562730	1520212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562655
transcript_38448.known	chr17	+	542	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	54	5	54	-5	multi-exon	FALSE	canonical	3	193	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	7	True	NA	18	True	AATAAA	-18	NA	1516930	1518096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_1517094_1517717
transcript_38449.known	chr17	-	7280	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_28	197.26541078012	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGGGCTGGTTTGTTT	-21	True	NA	-8	True	AATAAA	-30	NA	1684867	1650628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_3845.known	chr1	-	490	1	FSM	ENSG00000162384.14	ENST00000602807.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGTCTTGGAAAGCTT	47	False	NA	0	True	ATTAAA	-21	NA	53220576	53220086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53220100_53220600
transcript_38450.known	chr17	-	865	3	FSM	ENSG00000174231.17	ENST00000571346.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCGTCTCAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	1684852	1683020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1683702_1684471_1684583_1684779
transcript_38451.known	chr17	-	450	4	FSM	ENSG00000186594.15	ENST00000610106.6	1722	4	12	1260	0	-406	multi-exon	FALSE	canonical	0	0	junction_1	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCAGGATGCGTGTGGGA	3	True	NA	NA	False	NA	NA	NA	1716208	1712766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1712896_1713855_1714015_1714370_1714454_1716129
transcript_38453.known	chr17	-	570	3	FSM	ENSG00000186594.15	ENST00000608913.6	1965	3	23	1372	0	-518	multi-exon	FALSE	canonical	0	0	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTGGGAGGAGATGTG	1	True	NA	NA	False	NA	NA	NA	1716210	1712878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1713056_1713702_1714015_1716129
transcript_38454.known	chr17	-	2626	2	FSM	ENSG00000186594.15	ENST00000574306.2	2633	2	0	7	0	-4	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCAGTGTTATTATTTA	-1	True	NA	NA	False	AATATA	-7	NA	1716251	1711510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1714015_1716129
transcript_38458.known	chr17	+	1438	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	21.2468485058037	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	0	True	NA	29	True	AATAAA	-17	NA	1762059	1777565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_3846.known	chr1	-	656	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	98.4793760134578	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAACTCTTCTCAATT	-2	True	NA	-20	True	AATAAA	-44	NA	53238518	53226899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
transcript_38460.nic	chr17	+	1488	8	NIC	ENSG00000132386.11	novel	459	4	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	131.651984025913	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	720	False	NA	29	True	AATAAA	-17	NA	1762779	1777565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_1762884_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_38465.known	chr17	+	4847	17	FSM	ENSG00000132383.12	ENST00000254719.10	4847	17	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_5	102.587158065715	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGTAAATGTTTAAGAAA	0	True	NA	NA	False	NA	NA	NA	1830004	1900082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_1830127_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660_1875794_1877211_1877315_1878992_1879062_1879214_1879408_1879559_1879700_1880542_1880692_1883811_1883945_1888674_1888852_1891832_1891941_1895008_1895096_1897070
transcript_38472.known	chr17	-	4405	11	FSM	ENSG00000186532.12	ENST00000305513.12	4405	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	16.6916146612603	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAGATGGAGTTTCA	-35	True	NA	38	True	NA	NA	NA	1829902	1779484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_1781440_1783034_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
transcript_38477.known	chr17	+	1031	2	FSM	ENSG00000262664.3	ENST00000572195.3	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	-7	True	NA	10	True	AATAAA	-14	NA	2042021	2043425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2042232_2042604
transcript_3848.known	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	500.720369956015	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	17	True	NA	-46	True	AATAAA	-18	NA	53238499	53226925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
transcript_38480.known	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_7	72.4602635650628	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-8	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
transcript_38486.known	chr17	+	2482	8	FSM	ENSG00000167720.13	ENST00000344595.10	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	16.9428812334206	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGACCTGCAGGGTCTG	-14	True	NA	11	True	AATAAA	-24	NA	2303949	2325260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2304018_2315556_2315729_2317869_2317997_2318825_2318930_2321305_2321426_2321541_2321617_2323135_2323346_2323654
transcript_38496.nic	chr17	+	1765	2	ISM	ENSG00000141258.13	ENST00000572925.1	644	3	-106	-244	-106	0	intron_retention	FALSE	canonical	3	195	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCCTCTGGGACTGGA	146	False	NA	16	True	AATAAA	-16	NA	2379061	2381054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_2379204_2379431
transcript_38497.known	chr17	-	2813	1	FSM	ENSG00000070444.15	ENST00000575402.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGGAGAGTGGGGGAGG	9004	False	NA	NA	False	AGTAAA	-10	NA	2392078	2389265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_2389300_2392100
transcript_385.nic	chr1	-	626	4	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-235	16491	-202	-206	5prime_fragment	FALSE	canonical	3	64	junction_3	14.290634073484	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAGAAAAATGTAGGC	-21	True	NA	6	True	AAAAAG	-23	NA	1724559	1719371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_1719456_1721595_1721712_1722707_1722832_1724257
transcript_38500.nnic	chr17	-	3978	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	48.6691894323298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	NA	False	NA	-5	True	AATAAA	-33	NA	2511914	2416048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_2417174_2418961_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_38502.nnic	chr17	-	2426	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.6691894323298	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	NA	False	NA	-5	True	AATAAA	-33	NA	2511914	2416048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_2417174_2420513_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_38509.known	chr17	-	5740	10	FSM	ENSG00000127804.13	ENST00000263092.11	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.5758372192228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	1	True	NA	-5	True	AATAAA	-33	NA	2511888	2416048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_3851.known	chr1	+	567	3	FSM	ENSG00000225675.2	ENST00000445039.2	567	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTACTTCCTTTAAGT	3	True	NA	NA	False	NA	NA	NA	53328232	53336509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53328376_53331167_53331252_53336169
transcript_38514.nnic	chr17	-	1918	7	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3455043696562	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	NA	False	NA	-5	True	AATAAA	-33	NA	2511914	2416048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_2417174_2464298_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_38515.nnic	chr17	-	897	7	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	-1012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3455043696562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAACCCAT	NA	False	NA	NA	False	NA	NA	NA	2511914	2417069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_2417174_2464298_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_38520.known	chr17	+	5337	12	FSM	ENSG00000007168.14	ENST00000674608.1	5337	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	216.854142243731	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	3	True	NA	6	True	ATTAAA	-41	NA	2593952	2685608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2594007_2638098_2638321_2662780_2662835_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_38523.known	chr17	+	5589	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_4	44.4185771946829	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	9	True	NA	13	True	ATTAAA	-15	NA	2593653	2685615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_38524.known	chr17	+	5204	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	172.381360167894	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	-3	True	NA	6	True	ATTAAA	-41	NA	2593946	2685608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_38528.known	chr17	+	443	2	FSM	ENSG00000262050.1	ENST00000572876.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTCGGCCGGGCGG	286	False	NA	NA	False	TTTAAA	-29	NA	2712308	2712833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_2712400_2712481
transcript_38529.known	chr17	-	3147	1	ISM	ENSG00000277200.2	ENST00000614400.2	4643	4	25705	0	25705	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGTCCAATCTCTTGCA	NA	False	NA	-9	True	AATAAA	-15	NA	2723947	2720800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_2720800_2723900
transcript_38531.known	chr17	-	534	4	FSM	ENSG00000261848.5	ENST00000572821.5	534	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTATTCCCTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	3176935	3134968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3135191_3160233_3160289_3163692_3163890_3176875
transcript_38532.nnic	chr17	-	612	3	NIC	ENSG00000261848.5	novel	534	4	NA	NA	17	65	combination_of_known_splicesites	TRUE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTGGTTGTTCTTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	3176918	3134903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_3135191_3163692_3163890_3176790
transcript_38534.known	chr17	-	3788	7	FSM	ENSG00000197417.9	ENST00000225519.5	3788	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	13.208793367383	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTGCCTTTTTTTT	2	True	NA	NA	False	AAAAAG	-13	NA	3636250	3608239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
transcript_38536.known	chr17	+	2657	12	FSM	ENSG00000040531.16	ENST00000673965.1	2657	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19.8461021007915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGCTTGTCAGTCC	-22	True	NA	-72	True	NA	NA	NA	3636458	3661448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636704_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_38537.known	chr17	+	4139	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	9.916177616017	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	-1	True	NA	NA	False	ATTAAA	-22	NA	3636759	3663103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_38539.known	chr17	-	2060	12	FSM	ENSG00000083454.22	ENST00000225328.10	2060	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.7462241246806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-7	True	NA	-4	True	AATAAA	-17	NA	3696155	3673226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
transcript_3854.known	chr1	-	4552	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	0	0	0	0	multi-exon	TRUE	canonical	3	461	junction_7	54.5177029119519	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAACAGTTAATTGAAATA	-5	True	NA	-18	True	AATAAA	-18	NA	53838296	53765477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_38544.known	chr17	-	1863	11	FSM	ENSG00000083454.22	ENST00000551178.5	1863	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	23.2096962496281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	376	False	NA	-4	True	AATAAA	-17	NA	3696033	3673226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
transcript_38545.known	chr17	-	2031	11	FSM	ENSG00000083454.22	ENST00000345901.7	2031	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	19.8143887112371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGTCAATTTCAAACG	20	True	NA	-22	True	CATAAA	-7	NA	3696216	3673244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
transcript_38548.known	chr17	+	2417	10	FSM	ENSG00000040531.16	ENST00000673669.1	2417	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	22.7373625190124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	2	True	NA	-8	True	NA	NA	NA	3636725	3661512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_38551.known	chr17	+	803	6	FSM	ENSG00000040531.16	ENST00000399306.7	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	27.3671335729557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGCTGAGAGGGGAT	68	False	NA	NA	False	AATAAA	-21	NA	3636828	3650519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3650173
transcript_38553.nnic	chr17	-	1248	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.712594018244	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-1	False	NA	-6	True	AATAAA	-15	NA	3668641	3662894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_3663563_3663657_3663886_3664194_3664273_3664678_3664799_3668487
transcript_38554.nnic	chr17	-	1272	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.712594018244	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-1	False	NA	-6	True	AATAAA	-15	NA	3668641	3662894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_3663567_3663637_3663886_3664194_3664273_3664678_3664799_3668487
transcript_38558.known	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	6.0184900284226	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	0	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
transcript_38563.known	chr17	-	1302	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	174.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGGCTTTGCTGAGGC	NA	False	NA	-7	True	AATAAA	-14	NA	3668679	3662895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3663886_3664678_3664799_3668487
transcript_38566.known	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1261	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	2	True	NA	18	True	ATTAAA	-15	NA	3668811	3669665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3668900_3669097
transcript_38567.known	chr17	+	762	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTCTTTCCTGCTG	12	True	NA	21	True	ATTAAA	-18	NA	3668821	3669668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_3669013_3669097
transcript_38568.known	chr17	-	851	3	FSM	ENSG00000083454.22	ENST00000552456.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAATGGTGTCAATTT	8369	False	NA	-28	True	CATAAA	-1	NA	3688040	3673250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3673878_3679589_3679785_3688011
transcript_38571.known	chr17	-	721	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	262.530950556311	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGTGCAAAAAGTAAAC	NA	False	NA	-75	True	NA	NA	NA	3723854	3714691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
transcript_38572.known	chr17	-	672	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_3	11.6141675934562	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCCTTTAATCTGGAA	-34	True	NA	-11	True	AATAAA	-19	NA	3723837	3714627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
transcript_38576.known	chr17	-	12772	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_6	33.2802702646611	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTAGTGGCATT	-7	True	NA	-2	True	AATAAA	-20	NA	3846246	3802157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_38577.nnic	chr17	-	2782	13	NNC	ENSG00000074356.17	novel	12772	13	NA	NA	299	396	intron_retention	FALSE	canonical	3	8	junction_12	69.447622149518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGAGAGGAGTCTTAT	292	False	NA	-7	True	AATATA	-21	NA	3845947	3812143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3845745
transcript_38583.nic	chr17	-	1374	3	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	36946	0	-16600	5prime_fragment	FALSE	canonical	3	227	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGAGTCTATGTTCTT	-7	True	NA	-7	True	AATAAA	-19	NA	3846246	3839103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_3840206_3843085_3843152_3846040
transcript_38585.nic	chr17	-	1927	10	ISM	ENSG00000185722.18	ENST00000574367.5	5033	25	-23	28187	0	0	5prime_fragment	FALSE	canonical	2	74	junction_6	23.3036848673136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	-12	True	NA	NA	False	NA	NA	NA	4263979	4194460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_38587.known	chr17	-	1881	9	FSM	ENSG00000185722.18	ENST00000570934.5	1881	9	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_6	24.6221445044903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	4242450	4194460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255
transcript_38588.known	chr17	+	694	4	FSM	ENSG00000167740.10	ENST00000577075.6	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	33.2365260920372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTCTTCTGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4143167	4157085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4143314_4149890_4150032_4154673_4154861_4156865
transcript_3859.nic	chr1	-	2196	17	NIC	ENSG00000058804.12	novel	4552	18	NA	NA	-7	-2242	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	134.460902774747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCATTGATGGCAGTC	-12	True	NA	-16	True	AATAAA	-18	NA	53838303	53767719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53838204
transcript_38593.known	chr17	+	1969	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.6144555520604	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	-9	True	NA	12	True	ATTAAA	-25	NA	4143196	4157697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
transcript_38595.known	chr17	+	1588	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	38.8930156540563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCAGGTGTGGTGTG	5	True	NA	35	True	TTTAAA	-29	NA	4143210	4157572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
transcript_38597.nnic	chr17	-	1663	6	NNC	ENSG00000132388.13	novel	4167	6	NA	NA	24608	549	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_5	470.259332709091	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	NA	False	NA	-6	True	AATATA	-16	NA	4307315	4271430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4307242
transcript_386.known	chr1	-	3098	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	169.055177065247	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	8627	False	NA	NA	False	AATAAA	-20	NA	1778790	1751231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
transcript_38602.known	chr17	+	1919	8	FSM	ENSG00000188176.12	ENST00000338859.8	1919	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.63624111659431	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4	False	NA	9	True	CATAAA	-20	NA	4583998	4608319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4584099_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_38604.known	chr17	-	2697	14	FSM	ENSG00000161905.13	ENST00000293761.8	2697	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	3.19578124274477	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAGCATCAAAAAATTT	-1	True	NA	NA	False	AATAAA	-16	NA	4641678	4630918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4631780_4631888_4632057_4632180_4632282_4632860_4632983_4633145_4633316_4633413_4633501_4635758_4635969_4637114_4637259_4638216_4638378_4638580_4638685_4638849_4638973_4639050_4639133_4639429_4639632_4641516
transcript_38610.known	chr17	-	3465	17	FSM	ENSG00000141456.16	ENST00000574876.5	3465	17	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_9	56.5461302278945	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	0	True	NA	-3	True	AATAAA	-20	NA	4704129	4671384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_38611.nic	chr17	-	3334	17	NIC	ENSG00000141456.16	novel	3673	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	5	junction_10	221.058674337833	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTGCTGCTTCTGCCTT	-16	True	NA	-6	True	AATAAA	-17	NA	4704145	4671387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676500_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_38614.known	chr17	-	3673	17	FSM	ENSG00000141456.16	ENST00000301396.8	3673	17	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_9	56.5461302278945	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	8283	False	NA	-3	True	AATAAA	-20	NA	4704337	4671384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_3862.nnic	chr1	-	2513	17	NIC	ENSG00000058804.12	novel	4552	18	NA	NA	-87	-2242	combination_of_known_splicesites	FALSE	canonical	3	29	junction_4	136.660719827425	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCATTGATGGCAGTC	10	True	NA	-16	True	AATAAA	-18	NA	53838550	53767719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_38622.known	chr17	+	472	2	FSM	ENSG00000244184.1	ENST00000497885.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCTGCGTGTGGCTT	NA	False	NA	7	True	CATAAA	-17	NA	4704229	4705529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4704371_4705198
transcript_38624.nic	chr17	+	1826	15	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_13	125.430951002485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	20	False	NA	19	True	AATAAA	-15	NA	4710619	4721497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
transcript_38625.known	chr17	+	1778	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	61.3775535650669	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	-33	True	NA	19	True	AATAAA	-15	NA	4710631	4721497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38626.known	chr17	+	1779	15	FSM	ENSG00000141480.18	ENST00000412477.7	1779	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	130.232073073966	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	28	True	NA	18	True	AATAAA	-14	NA	4710692	4721496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716672_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38628.nnic	chr17	+	1745	15	NNC	ENSG00000141480.18	novel	1659	13	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	125.122062851621	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	3	True	NA	19	True	AATAAA	-15	NA	4710809	4721497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_4710890_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38631.known	chr17	+	1236	14	FSM	ENSG00000141480.18	ENST00000381488.10	1236	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	126.297057549106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGGTTGGGAGAGG	28	True	NA	NA	False	NA	NA	NA	4710692	4721061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38633.known	chr17	+	1348	14	FSM	ENSG00000141480.18	ENST00000574954.5	1348	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	79.9128963679653	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACTGTCAATGGGG	-35	True	NA	NA	False	NA	NA	NA	4710629	4721096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_38641.known	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	5.84465567848098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-22	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_38642.known	chr17	-	1668	5	FSM	ENSG00000161921.17	ENST00000574412.6	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.85234995535981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGCTTTTCACACTGG	-16	True	NA	NA	False	TTTAAA	-16	NA	4739922	4734285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_38644.known	chr17	+	652	3	FSM	ENSG00000161920.11	ENST00000575284.5	652	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	84	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCAAATGGTGGGCAT	2	True	NA	NA	False	NA	NA	NA	4731427	4733312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4731575_4731775_4731907_4732938
transcript_38645.known	chr17	+	836	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	3.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	2	True	NA	NA	False	AATAAA	-33	NA	4731427	4733607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4731575_4731775_4731907_4733049
transcript_38646.known	chr17	+	802	2	FSM	ENSG00000161920.11	ENST00000573708.1	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTGGTGGTGAGTA	5	True	NA	NA	False	NA	NA	NA	4731430	4732433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4731575_4731775
transcript_38648.known	chr17	-	698	3	FSM	ENSG00000182853.12	ENST00000328739.6	698	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCGCCTGTTTAT	1	True	NA	-1	True	ATTAAA	-16	NA	4786364	4785284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4785660_4785936_4786053_4786157
transcript_38650.known	chr17	+	871	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	2699.12007884051	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	5541	False	NA	37	True	AATAAA	-23	NA	4796143	4798502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
transcript_38651.known	chr17	+	824	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	0	0	0	0	multi-exon	FALSE	canonical	3	6421	junction_3	391.823123360529	3989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	-12	True	NA	30	True	AATAAA	-16	NA	4796163	4798495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
transcript_38662.known	chr17	+	3391	25	FSM	ENSG00000129219.14	ENST00000572940.5	3391	25	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_23	24.2525771826418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	3	True	NA	8	True	AATAAA	-12	NA	4807168	4823428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819550_4821792_4821908_4822639
transcript_38663.known	chr17	+	3443	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_23	15.6097703556316	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCGTCTTCCTTGGAG	-14	True	NA	10	True	AATAAA	-14	NA	4807151	4823430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
transcript_38668.nic	chr17	+	1466	10	ISM	ENSG00000129219.14	ENST00000263088.11	3443	25	-21	12119	-21	1986	5prime_fragment	FALSE	canonical	3	143	junction_1	9.70426913817691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGAGAGAGAGTTTT	-35	True	NA	15	True	AATAAA	-27	NA	4807130	4811311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801
transcript_38675.known	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	171.139968706579	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	-3	True	NA	28	True	AATAAA	-21	NA	4940267	4945222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38686.known	chr17	-	952	7	FSM	ENSG00000108528.14	ENST00000544061.6	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	395.178862457664	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTGCTGCGCCTATA	4	True	NA	NA	False	GGGGCT	-4	NA	4940053	4937723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939815
transcript_38688.known	chr17	+	1757	9	FSM	ENSG00000108523.16	ENST00000575111.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_3	44.4297197830461	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	11	False	NA	-3	True	NA	NA	NA	4940380	4945191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38689.known	chr17	+	1436	10	FSM	ENSG00000108523.16	ENST00000576229.5	1436	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	229.500800181504	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGTCTTCACTTCTTG	90	False	NA	-22	True	GGGGCT	-28	NA	4940486	4945172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_38693.nic	chr17	+	1657	12	NIC	ENSG00000108515.18	novel	1448	11	NA	NA	173	0	combination_of_known_junctions	FALSE	canonical	1	26	junction_1	46.4172595428799	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	201	False	NA	21	True	AATAAA	-17	NA	4950362	4957129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_4950631_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_38695.known	chr17	+	1453	12	FSM	ENSG00000108515.18	ENST00000519602.6	1453	12	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_4	34.9240024970395	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	0	True	NA	21	True	AATAAA	-17	NA	4951118	4957129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_38698.known	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_1	43.4286724040335	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	538	False	NA	23	True	AATAAA	-19	NA	4951094	4957131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_387.nic	chr1	-	3316	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	160.58555043423	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	9058	False	NA	NA	False	AATAAA	-20	NA	1780167	1751231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_3870.nic	chr1	-	1863	11	ISM	ENSG00000058804.12	ENST00000371429.4	4552	18	-254	34863	-87	18629	5prime_fragment	FALSE	canonical	3	477	junction_1	37.9327035682931	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATGACTGTAGT	10	True	NA	NA	False	NA	NA	NA	53838550	53800340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_38707.nnic	chr17	-	925	3	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-512	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	14438.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	-5	True	NA	-16	True	AATAAA	-18	NA	4947981	4945651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_4945998_4946627_4946821_4947595
transcript_38708.known	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	28033	junction_2	437	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	0	True	NA	-16	True	AATAAA	-18	NA	4948530	4945651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4945998_4946627_4946821_4948262
transcript_38709.known	chr17	+	890	6	FSM	ENSG00000108515.18	ENST00000519834.5	890	6	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_4	41.0784615096525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTTGAATTTAATCTCA	0	True	NA	NA	False	NA	NA	NA	4951118	4954225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711
transcript_38712.known	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	344.192492977726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	5575	False	NA	-32	True	GGGGCT	-8	NA	4967191	4959255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
transcript_38715.known	chr17	-	1005	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_1	42.5519290592879	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	2	True	NA	-2	True	AATAAA	-16	NA	4967817	4959225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_38719.known	chr17	-	1094	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	32.6042941957037	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	4976	False	NA	-2	True	AATAAA	-16	NA	4967790	4959225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_38724.known	chr17	-	579	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTAGCTGGGCTTGGT	11	True	NA	NA	False	AATAAA	-34	NA	4967808	4965829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4966320_4967719
transcript_38725.known	chr17	-	431	2	FSM	ENSG00000091640.8	ENST00000570341.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCCGCGGCGGACGGA	6017	False	NA	NA	False	NA	NA	NA	4966749	4966237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4966320_4966400
transcript_38728.known	chr17	-	856	2	FSM	ENSG00000108509.21	ENST00000572192.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGGCGCCGCGGGGA	1	True	NA	NA	False	NA	NA	NA	4969081	4968138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_4968820_4968906
transcript_38731.nnic	chr17	-	1095	7	NNC	ENSG00000196388.8	novel	973	7	NA	NA	-564	0	intron_retention	FALSE	non_canonical	0	0	junction_6	4.19324854180304	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTTGTCTTTCTTCT	-9	True	NA	-5	True	ATTAAA	-16	NA	4998174	4988129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_4988555_4988778_4988945_4989427_4989625_4989889_4989930_4990151_4990266_4994393_4994476_4998103
transcript_38738.known	chr17	-	2179	5	FSM	ENSG00000167840.13	ENST00000250076.7	2179	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.9441342542496	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTTGGATGCAAGTA	16	False	NA	-22	True	NA	NA	NA	5123102	5105634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799_5112352_5122976
transcript_38743.nic	chr17	-	1176	4	NIC	ENSG00000167840.13	novel	574	5	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	57.5905084772367	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	-28	True	NA	-5	True	CATAAA	-19	NA	5111891	5105734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5106534_5108925_5109053_5109710_5109869_5111799
transcript_38745.known	chr17	-	1610	4	FSM	ENSG00000167840.13	ENST00000575898.5	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	47.1616605117146	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTGTTT	22	True	NA	72	True	NA	NA	NA	5111841	5105540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106507_5108925_5109053_5109393_5109869_5111799
transcript_38747.known	chr17	+	452	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	16	1	-15	-1	multi-exon	FALSE	canonical	3	112	junction_1	152.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	-17	True	NA	15	True	AATAAA	-20	NA	5111941	5114382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5112102_5113385_5113453_5114157
transcript_38749.known	chr17	-	1907	3	FSM	ENSG00000167840.13	ENST00000574735.1	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	67	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	NA	False	NA	-5	True	CATAAA	-19	NA	5112064	5105734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106534_5108925_5109769_5111799
transcript_38750.nic	chr17	-	1855	3	NIC	ENSG00000167840.13	novel	1907	3	NA	NA	-67	0	intron_retention	FALSE	canonical	3	85	junction_2	42.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	NA	False	NA	-5	True	CATAAA	-19	NA	5111912	5105734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5106534_5108925_5109869_5111799
transcript_38754.nnic	chr17	-	1386	3	NIC	ENSG00000167840.13	novel	2179	5	NA	NA	-67	-1	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	22.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCCTGTGTCTTTCT	NA	False	NA	-6	True	CATAAA	-18	NA	5111912	5105735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5106534_5109393_5109869_5111799
transcript_38756.known	chr17	-	1553	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	16.9558249578132	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	18	True	NA	-43	True	NA	NA	NA	5111845	5105772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
transcript_38757.known	chr17	+	474	3	FSM	ENSG00000234327.9	ENST00000413077.2	508	3	18	16	6	0	multi-exon	FALSE	canonical	3	378	junction_1	19.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTCTTTGAACATTCA	-27	True	NA	10	True	AATAAA	-15	NA	5111931	5114377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5112119_5113385_5113453_5114157
transcript_38759.known	chr17	-	3611	17	FSM	ENSG00000108559.12	ENST00000573584.6	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	418	junction_6	49.7540434914591	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATATGTTTCCTTTAT	0	True	NA	-85	True	AATAAA	-17	NA	5419662	5384832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_38760.known	chr17	-	2194	17	FSM	ENSG00000108559.12	ENST00000225696.8	2194	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	122.877463734201	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTGTGGTTCATCT	196	False	NA	-25	True	TATAAA	-15	NA	5419466	5386101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387953_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_3877.nic	chr1	-	1902	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_10	96.9243549295655	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-24	True	NA	-18	True	AATAAA	-27	NA	53889813	53851718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_38775.nic	chr17	-	1826	13	ISM	ENSG00000108559.12	ENST00000573584.6	3611	17	-18	2811	-4	-100	5prime_fragment	FALSE	canonical	3	418	junction_2	48.1077349983001	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAACTAGAAGATCTCA	NA	False	NA	NA	False	TTTAAA	-29	NA	5419680	5387643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_38778.known	chr17	-	5535	12	FSM	ENSG00000005100.13	ENST00000225296.8	5535	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	3.24737656354395	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTGTGTGGCTTGTT	11	True	NA	-7	True	ATTAAA	-14	NA	5468982	5440916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5463528_5463690_5468570
transcript_38779.known	chr17	-	2081	11	FSM	ENSG00000108559.12	ENST00000574867.5	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_7	45.5126356081473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGTTGCAGTGAGC	0	True	NA	NA	False	NA	NA	NA	5419662	5388375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_38786.known	chr17	+	995	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	199.660267009293	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	-8	True	NA	5	True	AATAAA	-16	NA	5420181	5432877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
transcript_38791.known	chr17	+	1394	6	FSM	ENSG00000129197.15	ENST00000381208.9	1394	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	263.455954573056	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5432541
transcript_38793.known	chr17	+	1471	6	FSM	ENSG00000129197.15	ENST00000539417.6	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	293.834919640263	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5428070_5428212_5432541
transcript_38795.known	chr17	+	1688	6	FSM	ENSG00000129197.15	ENST00000571613.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_4	189.100396615131	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5428070_5428212_5432541
transcript_38799.known	chr17	+	1423	6	FSM	ENSG00000129197.15	ENST00000571558.5	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	268.521433036545	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5428070_5428212_5432541
transcript_38801.known	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	5817	junction_4	306.41775405482	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-34	True	NA	-4	True	CATAAA	-20	NA	5439155	5432776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
transcript_38804.known	chr17	+	815	5	FSM	ENSG00000129197.15	ENST00000327154.10	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	315.623589105757	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCATTCCCTCTGAGG	398	False	NA	-72	True	NA	NA	NA	5419887	5432608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5432541
transcript_38806.known	chr17	+	1547	5	FSM	ENSG00000129197.15	ENST00000571043.5	1547	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	272.371414616145	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5432541
transcript_38808.known	chr17	+	1282	5	FSM	ENSG00000129197.15	ENST00000573577.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	338.584830581643	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5432541
transcript_38810.known	chr17	+	1359	5	FSM	ENSG00000129197.15	ENST00000575599.5	1359	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	328.80883503945	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5428070_5428212_5432541
transcript_38814.known	chr17	+	1057	4	FSM	ENSG00000129197.15	ENST00000536255.6	1057	4	0	0	0	0	multi-exon	TRUE	canonical	3	275	junction_3	248.210931803309	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTTGGTCTTTTGTG	151	False	NA	35	True	AAGAAA	-18	NA	5419640	5432715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541
transcript_38816.known	chr17	+	597	3	FSM	ENSG00000129197.15	ENST00000572174.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_2	3.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGTAAGATAGTAGTAT	9	True	NA	NA	False	NA	NA	NA	5420166	5423069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295_5421467_5422768
transcript_38819.known	chr17	+	732	2	FSM	ENSG00000129197.15	ENST00000575711.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTGCCACCATGC	-1	True	NA	NA	False	NA	NA	NA	5420188	5421924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5420292_5421295
transcript_38828.nic	chr17	-	1127	8	NIC	ENSG00000072849.11	novel	657	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	388.397965483648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTCACTGTAT	-15	True	NA	-52	True	AATAAA	-9	NA	5486190	5474308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5474790_5480053_5480145_5480386_5480544_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38830.nic	chr17	-	1343	7	NIC	ENSG00000072849.11	novel	4167	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	326.404486624937	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTCACTGTAT	605	False	NA	-52	True	AATAAA	-9	NA	5486203	5474308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5485862
transcript_38831.known	chr17	-	4167	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_2	52.2390339369582	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATCTGGTATTTTTAA	-3	True	NA	-2	True	AATAAA	-25	NA	5486178	5471253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38833.known	chr17	-	657	7	FSM	ENSG00000072849.11	ENST00000570848.5	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	424.206186764042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTGGACACTTTTG	-3	True	NA	NA	False	NA	NA	NA	5486178	5474609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_38836.known	chr17	-	570	6	FSM	ENSG00000072849.11	ENST00000571476.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	355.707520302847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGCTTCGCCTGGGGTG	660	False	NA	NA	False	NA	NA	NA	5486148	5474726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5482808_5482883_5485150_5485217_5486068
transcript_38841.known	chr17	+	945	4	FSM	ENSG00000167842.16	ENST00000576570.5	945	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	49.9955553580071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCATTTCAAGACTAC	0	True	NA	NA	False	NA	NA	NA	5486384	5488935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5486685_5487556_5487695_5488195_5488590_5488822
transcript_38846.known	chr17	-	589	4	FSM	ENSG00000072849.11	ENST00000572834.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	414.185412050637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATATCCTGCCA	13	True	NA	NA	False	NA	NA	NA	5486162	5474451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5474790_5480053_5480145_5485150_5485217_5486068
transcript_3885.known	chr1	-	1602	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	74.148769376167	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	1000	False	NA	-18	True	AATAAA	-27	NA	53889733	53851718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_38850.known	chr17	+	2502	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	23.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	-13	True	NA	28	True	ATTAAA	-16	NA	5486565	5490811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5486685_5488195_5488590_5488822
transcript_38855.known	chr17	+	2505	3	FSM	ENSG00000167842.16	ENST00000381165.3	2505	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	54	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTATTTTCTGC	14	False	NA	31	True	ATTAAA	-19	NA	5486926	5490814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5487046_5488195_5488590_5488822
transcript_38857.known	chr17	+	2204	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	11	True	NA	-46	True	AATGAA	-24	NA	5486395	5490737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_5486685_5488822
transcript_38858.known	chr17	-	1500	2	FSM	ENSG00000286190.2	ENST00000568641.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTCTCCATTAATT	-7	True	NA	-16	True	AATAAA	-23	NA	5501006	5499426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_5499951_5500030
transcript_38859.known	chr17	-	2894	6	FSM	ENSG00000129221.16	ENST00000381129.8	2894	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTGTAGGTGTGTT	4	True	NA	NA	False	AATAAA	-16	NA	6435121	6423737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6425831_6426614_6426757_6426880_6427058_6428317_6428507_6433918_6434099_6435008
transcript_38860.known	chr17	-	2783	5	FSM	ENSG00000129221.16	ENST00000250087.9	2783	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTGTAGGTGTGTT	8999	False	NA	NA	False	AATAAA	-16	NA	6435199	6423737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6425831_6426614_6426757_6426880_6427058_6433918_6434099_6435008
transcript_38861.nic	chr17	-	905	2	ISM	ENSG00000091622.16	ENST00000575201.2	734	3	2004	0	2004	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCTCATCTGTCTACG	9471	False	NA	NA	False	AATAAA	-21	NA	6461877	6460568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_6460969_6461372
transcript_38867.known	chr17	+	891	7	FSM	ENSG00000129195.16	ENST00000570337.6	891	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	393.832204822759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCCTGTCTGACCGCCA	20	False	NA	NA	False	AAAAAG	-22	NA	6444442	6450365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6449703_6449779_6450027_6450073_6450361
transcript_38871.known	chr17	+	831	6	FSM	ENSG00000129195.16	ENST00000573557.5	831	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	377.891836376495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTCGTCAGTACCCCT	19	False	NA	NA	False	NA	NA	NA	6444441	6450441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445343_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_38872.known	chr17	+	1551	6	FSM	ENSG00000129195.16	ENST00000572595.6	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	285.895505386146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTGACATCTGTTCC	-8	True	NA	13	True	AATAAA	-7	NA	6444445	6451055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6446094_6446188_6447462_6447759_6449311_6449408_6450361
transcript_38874.known	chr17	+	1908	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	326.120223230636	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	1	True	NA	7	True	AATAAA	-18	NA	6444454	6451469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_38877.known	chr17	+	1473	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	398.066812859349	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCCCTTTCACCGG	18	False	NA	23	True	AATAAA	-17	NA	6444440	6451065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
transcript_38883.known	chr17	-	4647	19	FSM	ENSG00000198920.11	ENST00000361413.8	4647	19	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_18	7.33501664182178	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGCATTGCTCTCCGTG	177	False	6640730	-16	True	AATAAA	-24	NA	6640711	6578146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6640636
transcript_38888.known	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	1475.55029282863	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	185	False	NA	-6	True	NA	NA	NA	6640984	6643067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
transcript_38889.known	chr17	+	518	4	FSM	ENSG00000129235.11	ENST00000577146.5	518	4	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_1	1557.87469186567	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGCATGTGTCTAAA	248	False	NA	15	True	AATAAA	-11	NA	6641307	6643119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641499_6641752_6641835_6642248_6642325_6642950
transcript_3889.known	chr1	-	1821	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	94.6678403683109	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-8	True	NA	-32	True	AATAAA	-13	NA	53889797	53851732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_38893.known	chr17	+	2100	1	FSM	ENSG00000129235.11	ENST00000574429.1	2100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATGTGTCTAAACAAT	8	False	NA	19	True	AATAAA	-15	NA	6641023	6643123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641000_6643100
transcript_38894.known	chr17	+	459	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1579.9874120455	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGGCATGTGT	0	True	NA	10	True	AATAAA	-41	NA	6641015	6643114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
transcript_38895.known	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_3	332.862667710808	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	0	True	NA	-41	True	NA	NA	NA	6641059	6644541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
transcript_38896.known	chr17	+	505	4	FSM	ENSG00000129235.11	ENST00000573792.5	505	4	0	0	0	0	multi-exon	FALSE	canonical	2	144	junction_1	1513.69489073004	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCATGTGTCTAAAC	406	False	NA	16	True	AATAAA	-12	NA	6641465	6643120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641643_6641752_6641835_6642248_6642325_6642950
transcript_38897.known	chr17	-	593	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	70	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	6130	False	NA	-12	True	AATAGA	-31	NA	6651634	6644278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6644660_6650355_6650434_6651500
transcript_38898.known	chr17	+	616	4	FSM	ENSG00000129235.11	ENST00000574734.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1447.1411664228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGGCATGTGTCT	3	True	NA	12	True	AATAAA	-43	NA	6641033	6643116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6641228_6641752_6641933_6642248_6642325_6642950
transcript_38903.known	chr17	+	700	4	FSM	ENSG00000274114.2	ENST00000603173.6	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	6.0184900284226	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	7	True	NA	NA	False	AATAAA	-13	NA	6657303	6658491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6657405_6657644_6657784_6657861_6657985_6658154
transcript_38906.known	chr17	-	665	3	FSM	ENSG00000215067.11	ENST00000399541.6	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTGGTTTCACTGACT	6	True	NA	NA	False	CATAAA	-22	NA	7012334	6985108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_6985541_7009795_7009890_7012195
transcript_38907.known	chr17	+	2392	14	FSM	ENSG00000108839.12	ENST00000251535.11	2392	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.23076923076923	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTAGTCTTCTTTTGGT	-1	True	NA	21	True	AATAAA	-35	NA	6996048	7010754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6998952_6999057_6999305_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
transcript_38917.known	chr17	+	850	6	FSM	ENSG00000258315.5	ENST00000439424.6	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	67.8987481475174	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	-16	True	NA	30	True	AATAAA	-14	NA	7014781	7017520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_3892.nic	chr1	-	1656	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.0791658800246	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	881	False	NA	-32	True	AATAAA	-13	NA	53889852	53851732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_38924.known	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	254.37410933505	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	-4	True	NA	16	True	AAAACA	-5	NA	7014752	7017506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
transcript_38927.known	chr17	+	760	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	239.804086704126	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	12	False	NA	29	True	AATAAA	-13	NA	7014768	7017519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
transcript_38931.known	chr17	+	952	4	FSM	ENSG00000219200.12	ENST00000546395.5	952	4	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_1	755.506158515968	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	15	False	NA	19	True	AATAAA	-7	NA	7012460	7014520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012762_7013318_7013517_7013665_7013743_7014144
transcript_38935.known	chr17	+	591	3	FSM	ENSG00000219200.12	ENST00000552039.2	591	3	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	681.5	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	-5	True	NA	31	True	AATAAA	-19	NA	7012631	7014532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012758_7013665_7013743_7014144
transcript_38939.known	chr17	+	1485	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	9	True	NA	31	True	AATAAA	-19	NA	7012645	7014532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7013743_7014144
transcript_38940.known	chr17	+	739	3	FSM	ENSG00000219200.12	ENST00000552321.2	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	794.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	1	True	NA	19	True	AATAAA	-7	NA	7013230	7014520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7013517_7013665_7013743_7014144
transcript_38941.known	chr17	+	779	5	FSM	ENSG00000258315.5	ENST00000552775.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	171.80566783433	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	-19	True	NA	30	True	AATAAA	-14	NA	7015039	7017520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
transcript_38942.known	chr17	+	783	4	FSM	ENSG00000219200.12	ENST00000549393.2	783	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	772.124486221116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTCTTCAGCCCTGT	11	True	NA	18	True	AATAAA	-6	NA	7012647	7014519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012762_7013318_7013536_7013665_7013743_7014144
transcript_38943.known	chr17	+	595	3	FSM	ENSG00000219200.12	ENST00000552842.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	831	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGTGTCTGTGCTTG	9	True	NA	29	True	AATAAA	-17	NA	7012645	7014530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7012778_7013665_7013743_7014144
transcript_38944.known	chr17	+	3527	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	4.23526858652435	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	-1	True	NA	12	True	AATAAA	-18	NA	7023049	7029644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
transcript_38945.known	chr17	+	1804	4	FSM	ENSG00000174327.7	ENST00000308027.7	1804	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGAGGACTCT	7	True	NA	NA	False	GGGGCT	-25	NA	7036014	7040117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7036582_7036726_7036871_7038151_7038890_7039762
transcript_38948.nnic	chr17	-	1091	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.2231539093728	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	8	True	NA	-5	True	AGTAAA	-17	NA	7177499	7173430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7177442
transcript_38949.known	chr17	-	944	8	FSM	ENSG00000141505.12	ENST00000380920.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	11.2231539093728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAAGGATAGGGTGA	1436	False	NA	-87	True	NA	NA	NA	7178116	7173552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178084
transcript_38950.nnic	chr17	-	1099	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	10.1136400116731	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	1366	False	NA	-5	True	AGTAAA	-17	NA	7178186	7173430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178121
transcript_38951.nnic	chr17	-	1085	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	9.58740670603572	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-11	True	NA	-5	True	AGTAAA	-17	NA	7178178	7173430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178127
transcript_38953.nic	chr17	-	1880	7	ISM	ENSG00000141505.12	ENST00000380920.8	944	8	-56	-122	-56	0	intron_retention	FALSE	canonical	3	17	junction_6	7.0099136149377	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-5	True	NA	-5	True	AGTAAA	-17	NA	7178172	7173430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209
transcript_3896.known	chr1	-	1503	9	FSM	ENSG00000058799.15	ENST00000371399.5	1503	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	110.872392866755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	10	True	NA	-32	True	AATAAA	-13	NA	53889779	53851732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53889712
transcript_38960.known	chr17	+	562	2	FSM	ENSG00000072778.20	ENST00000578033.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	1664	False	NA	15	True	AATAAA	-17	NA	7224632	7225266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7224885_7224956
transcript_38963.known	chr17	-	2989	15	FSM	ENSG00000004975.12	ENST00000005340.10	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_11	52.6955057526789	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	-16	True	NA	-7	True	AATAAA	-18	NA	7234517	7225341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230156_7230284_7230431_7230727_7230798_7234068
transcript_38964.nic	chr17	-	2831	15	NIC	ENSG00000004975.12	novel	2989	15	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_11	93.1717746521807	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	-3	True	NA	-7	True	AATAAA	-18	NA	7234371	7225341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230057_7230156_7230284_7230431_7230727_7230798_7234068
transcript_38967.known	chr17	-	1768	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	253.626078115008	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCCTGCTCG	4	True	NA	-4	True	AATAAA	-26	NA	7239439	7235028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
transcript_3897.nic	chr1	-	1492	9	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	107.943272138656	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	881	False	NA	-32	True	AATAAA	-13	NA	53889852	53851732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889712
transcript_38971.known	chr17	-	1978	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_4	89.0066710982946	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-14	True	NA	-13	True	AATAAA	-17	NA	7239457	7235037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
transcript_38981.known	chr17	-	1944	4	FSM	ENSG00000040633.13	ENST00000576955.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	305.911025554091	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-12	True	NA	-13	True	AATAAA	-17	NA	7239455	7235037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7239245
transcript_38982.known	chr17	+	1304	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	252	-34	-3	0	multi-exon	FALSE	canonical	3	40	junction_1	222.044160866707	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	1074	False	NA	NA	False	AATAAA	-19	NA	7252052	7259931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_38984.known	chr17	+	1389	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	225.729373365541	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	19	False	NA	NA	False	AATAAA	-28	NA	7252231	7259940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_38985.known	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	201	junction_6	202.846679810649	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_38988.known	chr17	-	1767	8	FSM	ENSG00000175826.12	ENST00000574322.6	1767	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_4	55.8964056381563	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-13	True	NA	-6	True	TTTAAA	-27	NA	7251734	7243590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
transcript_38990.known	chr17	+	2209	6	FSM	ENSG00000170291.16	ENST00000574993.6	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	194.8790394065	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_38994.known	chr17	+	671	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	255.198452189664	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTTTTGACTTTTT	1077	False	NA	39	True	AATAAA	-27	NA	7252055	7254913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_38996.known	chr17	+	473	5	FSM	ENSG00000170291.16	ENST00000570500.6	473	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	268.801506692206	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCCTTTCCTGGGGGGC	24	False	NA	NA	False	NA	NA	NA	7252236	7254633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252346_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_39.known	ERCC-00109	+	520	1	FSM	ERCC-00109A	DQ854998	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00109_+_0_500
transcript_390.nic	chr1	-	2077	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	160.58555043423	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAAACTTCTGCAGGG	9058	False	NA	39	True	NA	NA	NA	1780167	1752470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_39000.known	chr17	-	605	5	FSM	ENSG00000181885.18	ENST00000575313.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	656.774504681782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCCTGGGAGGTGCAC	0	True	NA	NA	False	NA	NA	NA	7263200	7260488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262086_7263158
transcript_39003.known	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	630.434919321574	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	756	False	7263223	-52	True	AATAAA	-19	NA	7263213	7260136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
transcript_3901.nnic	chr1	-	956	6	NNC	ENSG00000081870.12	novel	894	6	NA	NA	-617	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	358.769898402862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTTTGCCAAGTTT	-23	True	NA	-20	True	AATAAA	-15	NA	53946316	53916573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_53917117_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
transcript_39010.known	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	57.567351858497	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	97	False	NA	32	True	AATAAA	-20	NA	7252375	7254906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
transcript_39013.known	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	1006.68796886953	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	1	True	NA	-10	True	AATAAA	-32	NA	7241819	7240407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
transcript_39015.known	chr17	-	568	4	FSM	ENSG00000170296.10	ENST00000571129.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1086.21677803691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCCTGCTGTAGACTTC	9978	False	NA	NA	False	NA	NA	NA	7242156	7240627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242078
transcript_39017.known	chr17	-	1319	4	FSM	ENSG00000170296.10	ENST00000302386.10	1319	4	0	0	0	0	multi-exon	FALSE	canonical	3	1716	junction_3	310.935148651076	1860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTTGGCTAGACTTTT	-58	True	NA	NA	False	AGTAAA	-20	NA	7242449	7240007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242240
transcript_39019.known	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_3	55.6496980125579	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	0	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
transcript_3902.known	chr1	-	685	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_5	99.674269498201	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-10	True	NA	-8	True	ATTAAA	-15	NA	53945699	53921560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_39024.known	chr17	-	583	3	FSM	ENSG00000170296.10	ENST00000570856.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	1211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTCTGTTCCCTTTC	33	True	NA	NA	False	NA	NA	NA	7242358	7240573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7240920_7241341_7241461_7242240
transcript_39026.known	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	245.664687916047	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	-14	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
transcript_39027.known	chr17	+	3375	11	FSM	ENSG00000181856.15	ENST00000317370.13	3375	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	4.73392015141785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGCCTGTTTTTGTTTT	-17	True	NA	NA	False	AAAACA	-25	NA	7281717	7288257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704_7285909_7286425
transcript_39028.known	chr17	+	1768	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.64471543707927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGCATTAATACTACAA	1	True	NA	-8	True	AATAAA	-8	NA	7281735	7286151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
transcript_3903.nnic	chr1	-	620	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-617	0	at_least_one_novel_splicesite	FALSE	canonical	3	280	junction_5	228.989432070565	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-23	True	NA	-8	True	ATTAAA	-15	NA	53946316	53921560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
transcript_39032.known	chr17	-	1176	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_10	182.755574470384	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	-8	True	NA	-8	True	AATAAA	-16	NA	7315360	7312660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
transcript_39046.known	chr17	-	1977	8	FSM	ENSG00000132522.16	ENST00000571697.5	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_7	215.684766192114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTCCCAGGCCAATAAA	NA	False	NA	-43	True	NA	NA	NA	7315564	7312695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7312840_7313028_7313292_7313379_7313470_7313567_7313989_7314079_7314160_7314290_7314404_7314487_7315120_7315330
transcript_39048.known	chr17	+	1256	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	4199.86728361742	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	5	True	NA	-42	True	AATAAA	-28	NA	7306998	7312463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_3905.known	chr1	-	760	5	FSM	ENSG00000081870.12	ENST00000371377.3	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_4	111.418972800865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTGAGATTCATATAAG	-11	True	NA	NA	False	AAAAAG	-43	NA	53945610	53923532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_39051.known	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	9070	junction_1	611.167603853477	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	-6	True	NA	-42	True	AATAAA	-28	NA	7307627	7312463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_39052.known	chr17	+	1089	6	FSM	ENSG00000132507.18	ENST00000573542.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	4200.26715340822	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTGGGGACCAGCCC	12	False	NA	NA	False	NA	NA	NA	7307601	7312244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7307753_7309596_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_39054.known	chr17	+	1271	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_1	3625.28407714485	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	-18	True	NA	38	True	AATAAA	-20	NA	7307973	7312455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_39055.known	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	4162.27963500772	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	12	True	NA	38	True	AATAAA	-20	NA	7308370	7312455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_39063.known	chr17	+	2511	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_2	11.1948319790227	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	-14	True	NA	21	True	ATTAAA	-21	NA	7336528	7351477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_39067.known	chr17	+	761	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	9.16515138991168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	6	False	NA	NA	False	ACTAAA	-14	NA	7336596	7342753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
transcript_39068.nic	chr17	+	1058	4	NIC	ENSG00000072818.12	novel	761	5	NA	NA	-22	0	intron_retention	FALSE	canonical	3	78	junction_2	10.4986771653491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	-36	True	NA	NA	False	ACTAAA	-14	NA	7336506	7342753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_7336788_7337311_7337370_7341947_7342329_7342415
transcript_39069.nnic	chr17	+	294	3	NNC	ENSG00000072818.12	novel	274	3	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	-8	True	NA	21	True	ATTAAA	-21	NA	7350353	7351477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_7350415_7350949_7351000_7351294
transcript_39070.known	chr17	+	274	3	FSM	ENSG00000072818.12	ENST00000570504.5	274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	28	False	NA	21	True	ATTAAA	-21	NA	7350389	7351477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7350431_7350949_7351000_7351294
transcript_39072.known	chr17	+	320	3	FSM	ENSG00000072818.12	ENST00000571471.5	320	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	63.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGGTTCACTTCTTG	-3	True	NA	20	True	ATTAAA	-20	NA	7350316	7351476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7350405_7350949_7351000_7351294
transcript_39073.known	chr17	+	412	3	FSM	ENSG00000072818.12	ENST00000574499.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	59	False	NA	21	True	ATTAAA	-21	NA	7350420	7351477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7350600_7350949_7351000_7351294
transcript_39074.known	chr17	+	3051	1	FSM	ENSG00000213859.8	ENST00000576980.2	3051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTTGTGAAGGCTGTT	54	False	NA	8	True	AATAAA	-16	NA	7351888	7354939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7351900_7354900
transcript_39079.known	chr17	-	1740	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	95.6302195380147	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-9	True	NA	-1	True	TATAAA	-26	NA	7394842	7389726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_39091.known	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_3	41.1204193666467	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-1	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
transcript_39092.known	chr17	-	403	2	FSM	ENSG00000205544.4	ENST00000575427.1	403	2	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGGAGTCTTTGTTC	616	False	NA	-26	True	ATTAAA	-15	NA	7403480	7402977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7403210_7403309
transcript_39093.known	chr17	+	2560	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	32.5699247773156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	-25	True	NA	14	True	ATTAAA	-18	NA	7445060	7457710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_39095.known	chr17	+	1623	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	16.7994708911389	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATCTTGAAGAAGCTC	-14	True	NA	NA	False	NA	NA	NA	7445502	7456926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_39097.nic	chr17	+	2121	9	NIC	ENSG00000170175.11	novel	1623	10	NA	NA	-21	-97	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	30.4197201663658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	396	False	NA	23	True	AATAAA	-32	NA	7445481	7457613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_39101.known	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.1245437895437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	-4	True	NA	-12	True	NA	NA	NA	7440742	7444902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_39103.nic	chr17	+	2634	4	ISM	ENSG00000161958.11	ENST00000575082.5	2315	5	-1	-35	0	0	intron_retention	FALSE	canonical	3	20	junction_1	19.2930615046504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	-5	True	NA	23	True	ATTAAA	-20	NA	7440741	7444937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593
transcript_39105.known	chr17	+	1095	2	FSM	ENSG00000170175.11	ENST00000575379.1	1095	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTTCACTGCAGCA	16	False	NA	NA	False	NA	NA	NA	7455593	7457329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7455942_7456582
transcript_39108.nic	chr17	+	1689	7	NIC	ENSG00000161955.17	novel	1593	7	NA	NA	-112	0	intron_retention	TRUE	canonical	3	6	junction_1	6.37704215656966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	1	True	NA	8	True	AATAAA	-16	NA	7558179	7561601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_7558376_7559067_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_39109.known	chr17	+	726	6	FSM	ENSG00000161955.17	ENST00000396542.5	726	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	9.2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATAAAAAGTGGCTCC	16	False	NA	NA	False	NA	NA	NA	7558292	7560835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7558376_7559067_7559298_7559850_7559894_7560048_7560168_7560349_7560489_7560723
transcript_3911.known	chr1	+	1764	9	FSM	ENSG00000116212.15	ENST00000371370.8	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	83.2442753286975	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-7	True	NA	28	True	AATAAA	-19	NA	53946349	53968168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53946550_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_39110.known	chr17	+	1811	6	FSM	ENSG00000161955.17	ENST00000338784.9	1811	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	5.41848687365763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	8	True	NA	8	True	AATAAA	-16	NA	7558749	7561601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_3912.nic	chr1	+	1861	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	120.54330134852	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-18	True	NA	28	True	AATAAA	-19	NA	53946338	53968168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_39122.known	chr17	+	2567	11	FSM	ENSG00000161956.13	ENST00000321337.12	2567	11	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_10	34.1058645983356	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	-10	True	NA	28	True	AATAAA	-22	NA	7561918	7571969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372
transcript_3913.nnic	chr1	+	1633	9	NNC	ENSG00000116212.15	novel	611	3	NA	NA	262	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	106.830400050735	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	190	False	NA	28	True	AATAAA	-19	NA	53946619	53968168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_53946689_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_39133.known	chr17	+	1758	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	996.406187254977	10102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGCTTCTCATTTCT	-1	True	NA	20	True	AATAAA	-18	NA	7572824	7579006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_39135.known	chr17	+	1319	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	3555.16880611878	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	11	False	NA	-33	True	AATAAA	-35	NA	7572836	7578641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
transcript_39149.known	chr17	+	1645	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_9	3608.75604914245	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAAACTGCCTGTT	16	False	NA	4	True	AATAAA	-2	NA	7572841	7578990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
transcript_3917.known	chr1	+	1727	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	59.8682226363256	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-4	True	NA	28	True	AATAAA	-19	NA	53946352	53968168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_39179.known	chr17	+	916	8	FSM	ENSG00000161960.16	ENST00000578495.5	916	8	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	3974.8903822647	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	0	True	NA	NA	False	NA	NA	NA	7572825	7577706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576529_7576693_7577055_7577166_7577343_7577488_7577568
transcript_39181.known	chr17	+	1444	8	FSM	ENSG00000161960.16	ENST00000581544.5	1444	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4064.59967152928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGACCTCATCTGAG	2	True	NA	NA	False	NA	NA	NA	7572827	7578467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7578245_7578341
transcript_39189.known	chr17	+	917	7	FSM	ENSG00000129255.16	ENST00000572719.5	917	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	162.025460962159	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAGTGGAAACAAATGG	7	True	NA	NA	False	NA	NA	NA	7583859	7587685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586655_7586778_7586898_7587018_7587160_7587272_7587425
transcript_39192.known	chr17	+	809	7	FSM	ENSG00000129255.16	ENST00000576272.5	809	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	155.326537762654	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCCTCTGCACTTGC	32	False	NA	NA	False	NA	NA	NA	7583884	7587643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_39199.known	chr17	+	924	6	FSM	ENSG00000129255.16	ENST00000581886.5	924	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	169.427978799253	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTTCTCCCCATCTGA	12	False	NA	NA	False	NA	NA	NA	7583864	7587595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587272_7587425
transcript_39201.known	chr17	+	591	6	FSM	ENSG00000129255.16	ENST00000570458.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	171.10628276016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCAGTAGAGCCAGCTACT	21	False	NA	NA	False	AAAAAG	-1	NA	7583873	7587542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7585731_7585798_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_39203.known	chr17	-	838	6	FSM	ENSG00000141504.12	ENST00000575826.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	153.429332267334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAGGGTTAGGGGTGCC	45	False	NA	NA	False	NA	NA	NA	7627796	7626341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626706_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627556
transcript_39207.known	chr17	-	860	6	FSM	ENSG00000141504.12	ENST00000571074.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	153.027317822669	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTAGGGGTGCCTATCC	-18	True	NA	NA	False	NA	NA	NA	7627859	7626336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627556
transcript_39208.known	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	113.118345108121	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	20	True	NA	NA	False	AATAAA	-20	NA	7627821	7626233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
transcript_39212.known	chr17	+	1645	5	FSM	ENSG00000129255.16	ENST00000577088.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_4	21.1704392963396	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATAATACAAAACTGTT	-1	True	NA	-22	True	AATAAA	-15	NA	7583851	7588177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7587272_7587425
transcript_39215.known	chr17	+	900	5	FSM	ENSG00000129255.16	ENST00000574558.1	900	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.939506291697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAGAGTGGAGGGACTG	42	False	NA	NA	False	NA	NA	NA	7583894	7587938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7583966_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_39216.known	chr17	-	685	5	FSM	ENSG00000141504.12	ENST00000570850.5	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	143.858437361178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGAAGCACTCTTCAG	39	False	NA	NA	False	NA	NA	NA	7627802	7626402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626706_7626794_7627142_7627227_7627362_7627415_7627552
transcript_39221.known	chr17	-	582	5	FSM	ENSG00000141504.12	ENST00000576686.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	91.3848318923879	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGCCCAAGATCTGAC	-35	True	NA	NA	False	NA	NA	NA	7627876	7626533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627552
transcript_39222.known	chr17	-	640	5	FSM	ENSG00000141504.12	ENST00000573566.1	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	114.298950126412	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGACTACGTCCACAG	36	True	NA	NA	False	NA	NA	NA	7627805	7626387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627569
transcript_39225.known	chr17	+	782	4	FSM	ENSG00000161960.16	ENST00000584712.5	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	1542.66918755196	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGATGTCAGAGCATGT	0	True	NA	NA	False	NA	NA	NA	7572825	7575679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118
transcript_39233.known	chr17	+	716	3	FSM	ENSG00000161960.16	ENST00000584054.5	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	1683.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATCGATTCTGCAGCA	-2	True	NA	NA	False	NA	NA	NA	7572823	7575171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259_7574309_7574545
transcript_39235.known	chr17	-	1050	3	FSM	ENSG00000129194.8	ENST00000538513.6	1050	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	22	False	NA	-5	True	ATTAAA	-19	NA	7590072	7588177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7588547_7589143_7589739_7589986
transcript_39236.known	chr17	+	2222	12	FSM	ENSG00000161956.13	ENST00000429205.6	2222	12	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_11	169.512914254854	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	235	False	NA	28	True	AATAAA	-22	NA	7562225	7571969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372_7571871_7571908
transcript_39237.known	chr17	+	562	2	FSM	ENSG00000161960.16	ENST00000580886.5	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTCATCCCAGCTTG	0	True	NA	-50	True	NA	NA	NA	7572825	7574782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7572865_7574259
transcript_39239.known	chr17	-	679	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	259	504	12	-497	multi-exon	FALSE	canonical	3	18	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTGGACAGGACAGGA	27	True	NA	NA	False	NA	NA	NA	7583518	7582471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582532_7582899
transcript_39240.known	chr17	-	725	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	8	12	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGACTGCATTATCTC	0	True	NA	-12	True	AATAAA	-16	NA	7584086	7581975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582532_7583917
transcript_39241.known	chr17	-	287	2	FSM	ENSG00000233223.4	ENST00000572046.2	1058	2	732	39	520	-37	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCGTCACATTTAATAA	7084	False	NA	-48	True	CATAAA	-35	NA	7583010	7582011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582164_7582875
transcript_39242.known	chr17	-	299	2	FSM	ENSG00000233223.4	ENST00000417897.2	371	2	30	42	4	-41	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGTTCGTCACATTTA	6026	False	NA	-52	True	CATAAA	-31	NA	7584068	7582015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582164_7583917
transcript_39243.known	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	0	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7588547_7589143
transcript_39245.known	chr17	-	1563	1	FSM	ENSG00000141504.12	ENST00000576846.1	1563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	45	False	NA	NA	False	AATAAA	-20	NA	7627796	7626233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7626200_7627800
transcript_39246.known	chr17	+	1705	6	FSM	ENSG00000129226.14	ENST00000250092.11	1705	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.83303027798234	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTTCTATGCCTTCC	16	True	NA	NA	False	ATTAAA	-20	NA	7579637	7582111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7579727_7579809_7580328_7580465_7580586_7580710_7580784_7580895_7581067_7581377
transcript_39247.known	chr17	-	352	2	FSM	ENSG00000233223.4	ENST00000415124.1	352	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCTCATATTTATTTAT	6022	False	NA	0	True	AATAAA	-28	NA	7584072	7581963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7582161_7583917
transcript_39248.known	chr17	+	3341	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	19.8221256848671	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	1	True	NA	16	True	AATAAA	-41	NA	7650925	7657770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
transcript_3925.known	chr1	-	6457	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_7	151.553721868666	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATCTTGTAAAAGTGTC	16	True	NA	-11	True	AATAAA	-28	NA	54053204	54026680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
transcript_39251.known	chr17	+	2657	11	FSM	ENSG00000141499.17	ENST00000498311.5	2657	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	74.4586462407154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGTCTTCGTGTCTGT	165	False	NA	13	True	TATAAA	-15	NA	7687599	7703501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701426_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_39253.known	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	20.2605528058837	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	16	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_39256.known	chr17	-	2512	11	FSM	ENSG00000141510.18	ENST00000269305.9	2512	11	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_10	21.9462980933004	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	-2	True	NA	-19	True	AATAAA	-13	NA	7687490	7668420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
transcript_39258.known	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	18.3491514251938	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_39267.known	chr17	-	1112	1	FSM	ENSG00000141510.18	ENST00000571370.1	1112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTACAATTCTTTTTG	1223	False	NA	-20	True	AATAAA	-14	NA	7686371	7685259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7685300_7686400
transcript_39268.known	chr17	-	1883	12	FSM	ENSG00000141510.18	ENST00000635293.1	1883	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.520935254124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTGTGGGTTTTT	-3	True	NA	-4	True	ATTAAA	-14	NA	7687491	7665415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7665532_7666901_7667426_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
transcript_39269.known	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	1	True	NA	9	True	AATAAA	-17	NA	7855065	7856099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7855285_7855444
transcript_39270.known	chr17	+	510	2	FSM	ENSG00000167874.7	ENST00000574668.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGTCCACGCATCAATA	1	True	NA	-29	True	GGGGCT	-23	NA	7855065	7856061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7855285_7855770
transcript_39272.known	chr17	+	3489	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	2.62466929133727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	-31	True	NA	10	True	AATAAA	-18	NA	7858002	7862282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
transcript_39274.known	chr17	+	1870	4	FSM	ENSG00000182224.12	ENST00000571846.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	21.0765799460496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAACTTTGGAAAGTTTAA	20	True	NA	NA	False	NA	NA	NA	7857745	7860474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859449
transcript_39275.nnic	chr17	-	527	4	NIC	ENSG00000183011.14	novel	556	5	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	214.974417082591	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	5463	False	NA	-4	True	ATTAAA	-13	NA	7885247	7856684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_7856844_7857014_7857199_7883234_7883336_7885164
transcript_39277.known	chr17	+	538	3	FSM	ENSG00000182224.12	ENST00000574196.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATCCGGGATGAGGAG	251	False	NA	NA	False	NA	NA	NA	7858284	7859505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7858480_7858605_7858825_7859381
transcript_39278.known	chr17	-	553	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	116	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-43	True	NA	-4	True	ATTAAA	-13	NA	7857562	7856684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7856844_7856984_7857199_7857382
transcript_39279.known	chr17	-	520	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	89	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-40	True	NA	-4	True	ATTAAA	-13	NA	7857559	7856684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7856844_7857014_7857199_7857382
transcript_39280.known	chr17	-	424	2	FSM	ENSG00000183011.14	ENST00000576384.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGACCGAATGGGCC	-59	True	NA	-18	True	NA	NA	NA	7857263	7856698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7856844_7856984
transcript_39281.known	chr17	+	2783	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_17	29.9281031477889	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	880	False	NA	17	True	AATAAA	-17	NA	7933079	7949578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
transcript_39286.known	chr17	-	759	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	449.887208086649	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	1080	False	NA	-3	True	AATAAA	-20	NA	7931999	7930344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
transcript_39287.known	chr17	-	812	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_2	60.0721788073869	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	3	True	NA	-7	True	AATAAA	-16	NA	7931946	7930348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
transcript_39288.known	chr17	-	409	4	FSM	ENSG00000170043.12	ENST00000572656.2	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	466.776891744511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCCACTGGGATCAAAGT	956	False	NA	NA	False	NA	NA	NA	7932123	7931094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7931150_7931505_7931577_7931730_7931830_7931939
transcript_39289.known	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	616.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	28	True	NA	NA	False	NA	NA	NA	7931921	7930503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931730
transcript_3929.known	chr1	-	1116	8	FSM	ENSG00000116209.12	ENST00000371341.5	1116	8	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_7	227.108982199997	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	NA	False	NA	28	True	NA	NA	NA	54053504	54031965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
transcript_39291.known	chr17	-	648	4	FSM	ENSG00000170043.12	ENST00000571739.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	555.721153097486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTGAGCGTGTTGGTT	-13	True	NA	-6	True	AATAAA	-17	NA	7931962	7930347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_7930735_7931010_7931150_7931730_7931830_7931939
transcript_39293.known	chr17	+	2697	14	FSM	ENSG00000179593.16	ENST00000380183.9	2697	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	1.5268794800984	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCTGGTGGTATGTGG	0	True	NA	NA	False	AATAAA	-15	NA	8039058	8049134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8039303_8039385_8039606_8039901_8039984_8042368_8042492_8042780_8042885_8044828_8045002_8045237_8045385_8045482_8045687_8046667_8046755_8046906_8047077_8047257_8047380_8047563_8047665_8047744_8047916_8048385
transcript_39296.known	chr17	+	1804	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	NA	False	NA	4	True	AATAAA	-19	NA	8079481	8081565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8079525_8079804
transcript_39297.known	chr17	-	4676	23	FSM	ENSG00000179094.16	ENST00000317276.9	4676	23	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_22	12.1175373217416	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTTTGTGGAATGAAG	-8	True	NA	-4	True	GATAAA	-7	NA	8152404	8140471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
transcript_39302.known	chr17	-	2126	5	FSM	ENSG00000220205.9	ENST00000316509.11	2126	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	43.412987688018	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTCTAAGATCTTTT	12	True	NA	-2	True	AATAAA	-18	NA	8162948	8159148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877
transcript_39304.known	chr17	-	557	4	FSM	ENSG00000220205.9	ENST00000481878.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	45.7456737480897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTATTTAGCCTGCATT	12	True	NA	NA	False	NA	NA	NA	8162948	8161318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8162877
transcript_39305.known	chr17	-	2263	5	FSM	ENSG00000179029.15	ENST00000437139.7	2263	5	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_2	3.93700393700591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTTATTGAGTACCT	-6	True	NA	-22	True	NA	NA	NA	8176380	8172456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8174519_8174617_8175756_8175858_8175958_8176027_8176199
transcript_39306.known	chr17	-	756	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.7032164438842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGACTTATATACAGT	-25	True	NA	-13	True	AATAAA	-17	NA	8176399	8174000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
transcript_39319.known	chr17	-	455	3	FSM	ENSG00000179029.15	ENST00000431792.2	455	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	41	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTAAGACTTATATACA	1	True	NA	-15	True	AATAAA	-15	NA	8176316	8174002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8175958_8176027_8176199
transcript_39321.known	chr17	-	2358	3	FSM	ENSG00000179029.15	ENST00000532998.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	1	True	NA	NA	False	NA	NA	NA	8176373	8173741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8175858_8175958_8176027_8176199
transcript_39323.known	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	1	True	NA	-27	True	AATACA	-3	NA	8176373	8173236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8176199
transcript_39327.known	chr17	-	726	5	FSM	ENSG00000179029.15	ENST00000533070.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	35.7036412708844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTATATACAGTTT	-14	True	NA	-11	True	AATAAA	-19	NA	8176388	8173998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8174273_8174540_8174617_8175756_8175876_8175958_8176027_8176199
transcript_39328.nnic	chr17	-	1313	3	Genic_Genomic	ENSG00000271002.1	novel	315	1	NA	NA	-791	7831	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATGTCTCCAAGCT	-4	True	NA	NA	False	AATAAA	-33	NA	8200228	8191291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr17_-_8192501_8199212_8199289_8200200
transcript_39344.known	chr17	-	1243	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	0	0	0	multi-exon	TRUE	canonical	3	539	junction_8	87.8335606417046	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	3	True	NA	-7	True	AATAAA	-22	NA	8210575	8204733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_39350.nic	chr17	-	1206	9	NIC	ENSG00000178999.13	novel	1243	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	240.099426019722	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	NA	False	NA	-7	True	AATAAA	-22	NA	8210634	8204733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206935_8207317_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_39361.known	chr17	-	1167	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	245.48228249796	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-3	True	NA	-16	True	AATAAA	-13	NA	8210581	8204742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
transcript_39367.nic	chr17	-	1559	8	NIC	ENSG00000178999.13	novel	1243	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	539	junction_7	91.6428293063091	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	NA	False	NA	-7	True	AATAAA	-22	NA	8210604	8204733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_39387.known	chr17	-	323	2	FSM	ENSG00000178999.13	ENST00000583124.1	323	2	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCTGCCAACGTGAATC	NA	False	NA	NA	False	NA	NA	NA	8210600	8209997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8210250_8210529
transcript_39389.known	chr17	-	7039	23	FSM	ENSG00000178971.16	ENST00000651323.1	7039	23	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_4	16.5427695124032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTCTTGGTTATTAA	-7	True	NA	-1	True	AATAAA	-22	NA	8248056	8224814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229141_8229207_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237520_8238030_8238243_8238391_8238630_8242984_8243149_8248003
transcript_39390.known	chr17	+	674	1	FSM	ENSG00000269947.1	ENST00000602597.1	674	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCAATCAGTCTCCCTC	9161	False	NA	18	True	ATTAAA	-23	NA	8277762	8278436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8277800_8278400
transcript_39391.known	chr17	+	831	5	FSM	ENSG00000108961.14	ENST00000226105.11	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_4	81.0030863609529	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTCTGTGCCTTTGA	-3	True	NA	NA	False	AATAAA	-17	NA	8288669	8290087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502_8289589_8289812
transcript_39394.known	chr17	-	1940	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	2.54950975679639	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-33	True	NA	2	True	TATAAA	-17	NA	8295400	8290060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_39396.known	chr17	+	1074	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	33.4896335536171	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	-19	True	NA	NA	False	AATAAA	-20	NA	8288653	8290090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
transcript_39397.known	chr17	+	749	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	218.037203757116	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	-2	True	NA	NA	False	AATAAA	-22	NA	8288670	8290092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
transcript_39400.known	chr17	+	1140	3	FSM	ENSG00000108961.14	ENST00000439238.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	30.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	5	True	NA	NA	False	AATAAA	-22	NA	8288677	8290092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8288866_8288955_8289073_8289257
transcript_39408.known	chr17	-	563	4	FSM	ENSG00000161970.15	ENST00000584343.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	5960.23178147368	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAACTGGACAAAGACC	182	False	NA	-68	True	NA	NA	NA	8383009	8377678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382774
transcript_39409.known	chr17	-	763	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_3	5772.25370967778	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGATTAAAACTTGA	25	False	NA	62	True	AATAAA	-15	NA	8383166	8377548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
transcript_39411.known	chr17	-	3209	3	FSM	ENSG00000184619.8	ENST00000643221.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGACCATGCCACTGC	6533	False	NA	NA	False	NA	NA	NA	8376658	8368709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8370387_8371308_8372082_8375899
transcript_39413.known	chr17	-	12370	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-18	True	NA	NA	False	GATAAA	-1	NA	8376704	8358821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8370387_8375899
transcript_39415.known	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_3	2137.3447701919	12153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-2	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
transcript_39416.known	chr17	-	564	4	FSM	ENSG00000161970.15	ENST00000583011.6	564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6073.10669170968	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTGTTTTGTGTGTG	NA	False	NA	88	True	AATAAA	-41	NA	8383213	8377522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795_8379937_8382142_8382339_8383156
transcript_39417.known	chr17	-	456	2	FSM	ENSG00000161970.15	ENST00000578069.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	11442	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGTGTTTTGTGT	3107	False	NA	85	True	AATAAA	-38	NA	8380084	8377525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377693_8379795
transcript_39418.known	chr17	-	443	3	FSM	ENSG00000161970.15	ENST00000582485.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGATTAAAACTTGAAACAA	882	False	NA	67	True	AATAAA	-20	NA	8382309	8377543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8377679_8379795_8379937_8382142
transcript_39426.nic	chr17	-	3022	23	ISM	ENSG00000133026.14	ENST00000465458.2	4236	26	35	6878	-6	-6878	5prime_fragment	FALSE	canonical	0	0	junction_17	306.276063151373	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAGAAAAAAATGCAAG	553	False	NA	NA	False	AAGAAA	-20	NA	8630786	8512481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_39427.nic	chr17	-	3007	23	NIC	ENSG00000133026.14	novel	7809	43	NA	NA	-2	-6878	combination_of_known_junctions	FALSE	canonical	3	124	junction_22	282.386849277065	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAGAAAAAAATGCAAG	-2	True	NA	NA	False	AAGAAA	-20	NA	8630727	8512481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
transcript_39428.nic	chr17	-	2992	22	ISM	ENSG00000133026.14	ENST00000269243.8	7662	41	-25	38270	-6	-6878	5prime_fragment	FALSE	canonical	3	835	junction_17	102.795351809999	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAGAAAAAAATGCAAG	553	False	NA	NA	False	AAGAAA	-20	NA	8630786	8512481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_39432.nic	chr17	-	1385	9	ISM	ENSG00000133026.14	ENST00000687661.1	2213	14	-17	7747	-6	-1830	5prime_fragment	FALSE	canonical	3	835	junction_4	142.846727298878	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGAGGCAATATTAAT	553	False	NA	NA	False	AATAAA	-20	NA	8630786	8548455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_39433.nic	chr17	-	960	6	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	-17	2696	-6	1949	5prime_fragment	FALSE	canonical	3	78	junction_1	442.140882525016	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGCTTAGAGCCTTAT	553	False	NA	NA	False	ATTAAA	-19	NA	8630786	8576509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_39436.nic	chr17	+	2472	10	NIC	ENSG00000166579.16	novel	2352	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	112.772577876839	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	-7	True	NA	23	True	AATAAA	-19	NA	8435850	8468163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_8436046_8444259_8444358_8444953_8445041_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_39439.known	chr17	+	2352	9	FSM	ENSG00000166579.16	ENST00000334527.12	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_8	33.8922926341668	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	-36	True	NA	23	True	AATAAA	-19	NA	8435883	8468163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_39446.known	chr17	+	2181	8	FSM	ENSG00000166579.16	ENST00000380025.8	2181	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	103.225728480879	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGACGTTGCTTTATTC	-20	True	NA	20	True	AATAAA	-16	NA	8435899	8468160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8466929
transcript_39447.known	chr17	-	2256	1	FSM	ENSG00000185156.6	ENST00000329805.6	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTATAGTCACTATATG	-4	True	NA	-2	True	AATACA	-19	NA	8799365	8797109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8797100_8799400
transcript_39448.known	chr17	-	680	6	FSM	ENSG00000141506.15	ENST00000578743.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	12.4354332453679	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGCCCAGCGCCAGA	9738	False	NA	NA	False	NA	NA	NA	8885086	8880640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8884919
transcript_39451.known	chr17	-	731	7	FSM	ENSG00000170310.15	ENST00000574431.5	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	221.037515669475	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAAAGCTCTGACCTC	0	True	NA	-17	True	AATAAA	-2	NA	9575837	9250486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9575791
transcript_39453.known	chr17	-	830	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_7	70.7504957796143	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	17	True	NA	-1	True	AATAAA	-18	NA	9575820	9250470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
transcript_39454.known	chr17	-	638	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	207.526962103723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTGCATTGCTTCA	2	True	NA	-2	True	AATAAA	-17	NA	9575835	9250471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
transcript_39455.known	chr17	-	454	5	FSM	ENSG00000170310.15	ENST00000575294.6	454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	251.962670846298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGCTCTCAATAAAT	26	True	NA	-37	True	NA	NA	NA	9575811	9250506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9568370_9568471_9575791
transcript_39459.known	chr17	-	9577	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	42.1881499949927	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTTTTTTTTGTA	-6	True	NA	NA	False	AATAAA	-17	NA	10697533	10672473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
transcript_3946.known	chr1	-	3276	18	FSM	ENSG00000157216.16	ENST00000610401.5	3276	18	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	50.3013754653133	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-2	True	NA	-23	True	ATTAAA	-19	NA	54406419	54225432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54258068_54258150_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_39462.known	chr17	-	2813	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	4.3081318457076	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATCTTTTTTTTTTTT	-18	True	NA	NA	False	ATTAAA	-17	NA	10730023	10713294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
transcript_39467.known	chr17	+	1534	4	FSM	ENSG00000170222.12	ENST00000379774.5	1534	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.32049379893857	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTATACTTGGATTTTT	-24	True	NA	NA	False	NA	NA	NA	10697593	10711558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10697668_10704909_10705528_10706437_10706555_10710833
transcript_39468.known	chr17	+	1277	4	FSM	ENSG00000170222.12	ENST00000468843.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	6.64997911442	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGCTTGCATAACAAAAT	-4	True	NA	12	True	AATAAA	-25	NA	10697613	10711233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10697668_10704909_10705616_10706437_10706555_10710833
transcript_39472.known	chr17	+	575	4	FSM	ENSG00000263400.8	ENST00000579114.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTATACCCAGGTGGTA	16	True	NA	NA	False	NA	NA	NA	10729803	10768030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10729901_10754228_10754363_10766678_10766857_10767864
transcript_39476.known	chr17	+	1138	3	FSM	ENSG00000170222.12	ENST00000609540.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGCTTGCATAACAA	7282	False	NA	9	True	AATAAA	-22	NA	10704899	10711230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_10705528_10706437_10706551_10710833
transcript_39478.known	chr17	-	2261	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	27.4043792120894	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTATCTTATTTGTTT	0	True	NA	-14	True	AATAAA	-13	NA	11997457	11977451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_39479.known	chr17	-	2295	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	25.0399680510978	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-18	True	NA	-1	True	AATAAA	-26	NA	11997475	11977438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_39483.nnic	chr17	+	1613	3	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_2	4.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGTTCT	NA	False	NA	12	True	AATAAA	-18	NA	11971995	11976905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_11972336_11973569_11974438_11976500
transcript_39485.nnic	chr17	+	797	2	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	560	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGTTCT	NA	False	NA	12	True	AATAAA	-18	NA	11971943	11976905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_11972336_11976500
transcript_39487.nic	chr17	-	2780	24	NIC	ENSG00000006744.19	novel	3767	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_23	173.38921109896	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	-1	True	NA	-9	True	AATAAA	-15	NA	13017683	12992390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017566
transcript_39488.known	chr17	+	2898	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	45.6240677225908	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	-15	True	NA	14	True	AATAAA	-15	NA	14069503	14208677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
transcript_39492.known	chr17	+	1384	6	FSM	ENSG00000006695.12	ENST00000580561.1	1384	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	95.6757022446138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCACTTGGTGGCCAGA	85	False	NA	NA	False	NA	NA	NA	14069603	14207585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_14069649_14074322_14074457_14102117_14102243_14159876_14159948_14191988_14192222_14206809
transcript_39493.known	chr17	+	875	3	FSM	ENSG00000006695.12	ENST00000429152.6	875	3	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	10.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCTTTAGTGTTT	-23	True	NA	NA	False	ATTAAA	-22	NA	14069495	14077322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_14069649_14074322_14074457_14076734
transcript_39494.known	chr17	-	459	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTTTGTT	41	False	NA	NA	False	AAGAAA	-4	NA	14705534	14705075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_14705100_14705500
transcript_39495.known	chr17	-	1740	9	FSM	ENSG00000125409.13	ENST00000395930.6	1740	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGTCTCGGAAAGCCT	2	True	NA	NA	False	ATTAAA	-27	NA	15341597	15303811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15304153_15308663_15308819_15312258_15312482_15314086_15314231_15319076_15319148_15327991_15328076_15331006_15331615_15340027_15340062_15341517
transcript_39496.known	chr17	-	2047	5	FSM	ENSG00000109099.16	ENST00000675808.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.16441400296898	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCACTGGTCTCTCTTG	9687	False	NA	-7	True	AATAAA	-9	NA	15262605	15229785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260984_15262428
transcript_39500.nnic	chr17	-	2983	8	NIC	ENSG00000259024.6	novel	2833	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	108.954025129119	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	46	False	NA	-18	True	AATAAA	-15	NA	15563576	15436020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15438201_15440207_15440286_15503097_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_39506.known	chr17	-	2833	7	FSM	ENSG00000259024.6	ENST00000522212.6	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	103.660369583666	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	61	False	NA	-18	True	AATAAA	-15	NA	15563561	15436020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_39507.known	chr17	-	520	7	FSM	ENSG00000259024.6	ENST00000518506.4	520	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	125.786415094088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCACCTATACCTCT	174	False	NA	NA	False	AAAACA	-15	NA	15563448	15438140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553764_15553830_15555281_15555365_15563436
transcript_39509.known	chr17	-	556	6	FSM	ENSG00000259024.6	ENST00000481756.7	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	107.181341659824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCGAGGAAAGACCCTG	16	True	NA	NA	False	NA	NA	NA	15563472	15438063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15555281_15555365_15563436
transcript_39514.known	chr17	-	1527	6	FSM	ENSG00000175106.17	ENST00000225576.7	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	94.3152161636711	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGCCTTCGTAATGAAA	78	False	NA	NA	False	ATTAAA	-19	NA	15563544	15502263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_39515.nic	chr17	-	2599	12	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	6	junction_5	16.9086021434736	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	NA	False	NA	-13	True	AATAAA	-16	NA	15684333	15627965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_39517.nic	chr17	-	2524	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	26	junction_5	9.79846926820715	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	NA	False	NA	-13	True	AATAAA	-16	NA	15684333	15627965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_39526.known	chr17	+	5443	6	FSM	ENSG00000187607.16	ENST00000395894.6	5443	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	50.5276162113354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	-16	True	NA	10	True	AATAAA	-27	NA	15699738	15720787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_39530.known	chr17	+	607	6	FSM	ENSG00000187607.16	ENST00000585194.5	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	66.9429607949932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCTTTCAGACATGG	-10	True	NA	NA	False	NA	NA	NA	15699744	15716044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_39535.nic	chr17	+	831	5	ISM	ENSG00000187607.16	ENST00000395894.6	5443	6	1	12363	0	0	5prime_fragment	FALSE	canonical	3	79	junction_1	54.2148503640838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	-15	True	NA	10	True	AATAAA	-22	NA	15699739	15708424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154
transcript_3954.known	chr1	-	6193	8	FSM	ENSG00000215883.11	ENST00000534324.6	6193	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	11.4321422992815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTGCTTGTTCAATG	-15	True	NA	-3	True	ATTAAA	-15	NA	54200030	54169650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54190747_54190897_54195418_54195716_54196368_54196492_54199975
transcript_39542.nic	chr17	+	1404	3	ISM	ENSG00000187607.16	ENST00000395894.6	5443	6	-62	18652	-42	835	5prime_fragment	FALSE	canonical	3	79	junction_1	63	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTGAATTTAGGCGG	NA	False	NA	NA	False	NA	NA	NA	15699676	15702135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_15699778_15700047_15700367_15701151
transcript_39543.nic	chr17	+	1599	2	ISM	ENSG00000187607.16	ENST00000395893.6	654	5	-381	7803	0	835	5prime_fragment	FALSE	canonical	3	205	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTGAATTTAGGCGG	-3	True	NA	NA	False	NA	NA	NA	15699751	15702135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_15700367_15701151
transcript_39544.known	chr17	+	690	1	FSM	ENSG00000276855.1	ENST00000612568.1	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTGTCTAAAAGTGG	2833	False	NA	21	True	AATAAA	-24	NA	15789015	15789705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_15789000_15789700
transcript_39545.known	chr17	+	1522	2	FSM	ENSG00000170425.4	ENST00000304222.3	1522	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGCCAGGAAGGTG	10	True	NA	NA	False	AATAAA	-23	NA	15945129	15975746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_15945584_15974678
transcript_39548.known	chr17	-	1264	8	FSM	ENSG00000214941.8	ENST00000490395.5	1264	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	238.555431456823	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	11	True	NA	-4	True	GATAAA	-32	NA	15999650	15976559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_3955.known	chr1	+	1483	7	FSM	ENSG00000116221.15	ENST00000360840.9	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_5	73.6176307385368	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTGGTATGAGGG	-15	True	NA	26	True	AATAAA	-22	NA	54200166	54218383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54218171
transcript_39550.known	chr17	-	721	8	FSM	ENSG00000214941.8	ENST00000497719.5	721	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	254.431980405493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAAAATAGATGACAGA	-8	True	NA	-63	True	NA	NA	NA	15999713	15977011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_3956.known	chr1	+	1582	7	FSM	ENSG00000116221.15	ENST00000605337.5	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	599.895824289518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACATATATCGTACACA	14	True	NA	-5	True	AATAAA	-6	NA	54200195	54225464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54225124
transcript_39560.nic	chr17	-	839	7	NIC	ENSG00000214941.8	novel	987	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	221.122452249628	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-12	True	NA	-4	True	AATAAA	-25	NA	15999717	15977729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
transcript_39561.nic	chr17	-	834	7	NIC	ENSG00000214941.8	novel	987	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	211.725451154713	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	745	False	NA	-4	True	AATAAA	-25	NA	15999725	15977729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999518
transcript_39566.known	chr17	-	969	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	251.610333651064	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	882	False	NA	-4	True	GATAAA	-32	NA	15999588	15976559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_39567.nic	chr17	-	1090	6	NIC	ENSG00000214941.8	novel	1264	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	201.762831066577	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	745	False	NA	-4	True	GATAAA	-32	NA	15999725	15976559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
transcript_39571.known	chr17	-	918	6	FSM	ENSG00000214941.8	ENST00000486706.6	918	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	240.875569537469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	-8	True	NA	-7	True	AATAAA	-22	NA	15999669	15977732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
transcript_39574.known	chr17	-	671	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	173.606912304781	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	22	True	NA	-1	True	AATAAA	-28	NA	15999639	15977726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_39575.known	chr17	-	703	6	FSM	ENSG00000214941.8	ENST00000472495.5	703	6	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_5	118.174447322592	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	786	False	15999705	-1	True	AATAAA	-28	NA	15999684	15977726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
transcript_39576.known	chr17	-	558	6	FSM	ENSG00000214941.8	ENST00000495825.6	558	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	215.967034521475	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-22	True	NA	-4	True	AATAAA	-25	NA	15999683	15977729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_39577.known	chr17	-	682	5	FSM	ENSG00000214941.8	ENST00000460252.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	225.936246538708	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGGGCTGTGGAGG	-20	True	NA	NA	False	NA	NA	NA	15999681	15977890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_39578.known	chr17	-	2020	5	FSM	ENSG00000214941.8	ENST00000399277.6	2020	5	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_4	107.66237736554	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	1	True	NA	-4	True	GATAAA	-32	NA	15999704	15976559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
transcript_39579.known	chr17	-	1869	5	FSM	ENSG00000214941.8	ENST00000399280.6	1869	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	237.611026680161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	11	True	NA	-4	True	GATAAA	-32	NA	15999694	15976559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_39580.known	chr17	-	677	5	FSM	ENSG00000214941.8	ENST00000584519.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	237.369437796865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGCTGGGGTGCAGTG	834	False	NA	43	True	NA	NA	NA	15999636	15977682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15999518
transcript_39587.known	chr17	-	987	8	FSM	ENSG00000214941.8	ENST00000585208.5	987	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	205.395387743061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	836	False	NA	-7	True	AATAAA	-22	NA	15999634	15977732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986887_15987265_15987369_15990864_15991105_15993756_15993779_15999505
transcript_39590.nic	chr17	+	1651	9	ISM	ENSG00000011295.16	ENST00000261647.10	3050	10	251	1233	241	-615	3prime_fragment	FALSE	canonical	3	513	junction_6	39.3636888515291	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGTGTTTATATAAAAC	252	False	NA	-27	True	AATAAA	-38	NA	16000074	16028171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_39591.nic	chr17	+	2266	9	ISM	ENSG00000011295.16	ENST00000261647.10	3050	10	251	618	241	0	3prime_fragment	FALSE	canonical	3	513	junction_6	39.3636888515291	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	252	False	NA	33	True	AATAAA	-19	NA	16000074	16028786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_39596.known	chr17	+	1289	7	FSM	ENSG00000108474.17	ENST00000225609.10	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.4419672692682	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	-6	True	NA	NA	False	NA	NA	NA	16217209	16326411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
transcript_39598.nic	chr17	+	2216	6	NIC	ENSG00000108474.17	novel	1289	7	NA	NA	-3	-157	intron_retention	FALSE	canonical	3	66	junction_2	18.5105375394665	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACAGATGTGACTTTTA	NA	False	NA	15	True	CATAAA	-26	NA	16217187	16326254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16317909_16325799
transcript_39599.known	chr17	+	1257	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	36.8423669163641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	-6	True	NA	NA	False	NA	NA	NA	16217209	16326411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
transcript_39601.nnic	chr17	+	794	5	NNC	ENSG00000108474.17	novel	946	5	NA	NA	-3	-2661	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	37.1508748214628	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGTGACATAGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	16217187	16314172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16313911
transcript_39604.known	chr17	+	395	2	FSM	ENSG00000108474.17	ENST00000489009.1	395	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTAATGTGAGTGGC	21	False	NA	NA	False	AATAAA	-29	NA	16217236	16234140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16217462_16233970
transcript_39605.known	chr17	+	888	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCCATTTGTTTG	30	False	NA	14	True	AATAAA	-25	NA	16217245	16218219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16217462_16217547
transcript_39608.known	chr17	-	671	1	NIC	ENSG00000166582.11	novel	1770	5	NA	NA	1248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACCACTGTTAATATTT	4742	False	NA	-17	True	AATAAA	-25	NA	16348708	16348037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_16348000_16348700
transcript_39609.known	chr17	-	554	2	FSM	ENSG00000166582.11	ENST00000472570.2	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	2327	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	8708	False	NA	-17	True	AATAAA	-20	NA	16344742	16342533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_16342942_16344596
transcript_39612.known	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6628	junction_1	0	9214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	-3	True	NA	24	True	AATAAA	-18	NA	16381090	16382740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381185_16381901
transcript_39613.known	chr17	+	1056	2	FSM	ENSG00000170315.14	ENST00000614404.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTTTGTCATG	0	True	NA	26	True	AATAAA	-20	NA	16381464	16382742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381680_16381901
transcript_39614.known	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	0	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	196	False	NA	24	True	AATAAA	-18	NA	16381289	16382740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381463_16381901
transcript_39615.known	chr17	+	1014	2	FSM	ENSG00000170315.14	ENST00000395837.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	6	True	NA	24	True	AATAAA	-18	NA	16381340	16382740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381516_16381901
transcript_39616.known	chr17	+	704	3	FSM	ENSG00000170315.14	ENST00000535788.1	704	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3314	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATACTTGGTGTTTTGTC	-3	True	NA	23	True	AATAAA	-17	NA	16381090	16382739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16381185_16381901_16382131_16382358
transcript_39618.known	chr17	+	2779	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1.11574995370095	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	7	True	NA	25	True	AATATA	-17	NA	16415570	16437003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
transcript_39625.known	chr17	+	1149	6	FSM	ENSG00000175061.19	ENST00000484836.2	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1407.83612682727	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440110_16440254_16441073_16441131_16441367
transcript_39626.known	chr17	+	1061	6	FSM	ENSG00000175061.19	ENST00000662869.1	1061	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1366.90037676489	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439531_16439704_16440184_16440254_16441073_16441131_16441367
transcript_39629.known	chr17	+	1056	6	FSM	ENSG00000175061.19	ENST00000667979.2	1066	6	0	10	0	0	multi-exon	FALSE	canonical	3	209	junction_2	1307.47582769243	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	4	False	NA	-26	True	AATAAA	-20	NA	16438992	16442018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
transcript_3963.nic	chr1	-	846	6	NIC	ENSG00000215883.11	novel	5643	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.00856880627	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTGTGGGTATGTAT	-15	True	NA	-3	True	ATTAAA	-17	NA	54200030	54186152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_54186287_54187651_54187740_54190747_54190897_54195418_54195716_54196368_54196492_54199975
transcript_39630.known	chr17	+	604	6	FSM	ENSG00000175061.19	ENST00000584926.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1482.06294063376	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGAGTGTGGTGGCA	0	True	NA	NA	False	NA	NA	NA	16439036	16441615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440110_16440254_16441073_16441131_16441367
transcript_39631.known	chr17	+	993	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	0	4	0	0	multi-exon	FALSE	canonical	3	198	junction_2	1310.53766065688	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	-2	True	NA	-16	True	AATAAA	-30	NA	16438986	16442028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_39636.known	chr17	+	879	5	FSM	ENSG00000175061.19	ENST00000582911.6	885	5	0	6	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	1371.05898851946	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATTCTTGAAAATGTG	31	False	NA	-32	True	AATAAA	-14	NA	16439019	16442012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439394_16440184_16440254_16441073_16441131_16441367
transcript_39637.known	chr17	+	1300	5	FSM	ENSG00000175061.19	ENST00000653954.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	1165.75219815362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTGAAAATGTGTATT	0	True	NA	-28	True	AATAAA	-18	NA	16439036	16442016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073
transcript_39638.known	chr17	+	1035	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_4	814.961770575774	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	21	False	NA	-26	True	AATAAA	-20	NA	16439009	16442018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
transcript_3964.known	chr1	+	1179	5	FSM	ENSG00000116221.15	ENST00000336230.10	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	720.481566384595	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTTTGGTATGAG	-15	True	NA	24	True	AATAAA	-20	NA	54200166	54218381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54200590_54209947_54210132_54212500_54212659_54216140_54216345_54218171
transcript_39642.known	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	209	junction_2	877.879405157679	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	0	True	NA	-21	True	AATAAA	-25	NA	16439036	16442023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
transcript_39646.known	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	880.255751188256	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
transcript_39648.known	chr17	+	973	5	FSM	ENSG00000175061.19	ENST00000477249.7	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1369.39137940912	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440110_16440254_16441073_16441131_16441367
transcript_39649.known	chr17	+	1217	5	FSM	ENSG00000175061.19	ENST00000475947.7	1217	5	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	376.111270105005	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCAGATATTCGCTCT	8581	False	NA	32	True	AGTAAA	-26	NA	16438766	16442076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_39650.known	chr17	+	1178	5	FSM	ENSG00000175061.19	ENST00000480811.6	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_2	1051.04552113598	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439704_16440184_16440254_16441073_16441131_16441367
transcript_39651.known	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1371.4202492307	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	12	False	NA	-16	True	AATAAA	-30	NA	16439000	16442028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_39652.known	chr17	+	1159	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	397.256424323971	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	15	False	NA	-26	True	AATAAA	-20	NA	16439003	16442018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
transcript_39655.known	chr17	+	897	4	FSM	ENSG00000175061.19	ENST00000580180.6	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	1170.31970940518	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8796	False	NA	-16	True	AATAAA	-30	NA	16438981	16442028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441367
transcript_39657.known	chr17	+	1685	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	427.564679967319	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	22	False	NA	-26	True	AATAAA	-20	NA	16439010	16442018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
transcript_39658.known	chr17	+	793	4	FSM	ENSG00000175061.19	ENST00000658116.2	801	4	1	7	0	-5	multi-exon	FALSE	canonical	3	20	junction_1	1570.24867103554	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAATTCTTGAAAATGT	1	True	NA	-33	True	AATAAA	-13	NA	16439037	16442011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16440184_16440254_16441073_16441131_16441367
transcript_39661.known	chr17	+	1470	3	FSM	ENSG00000175061.19	ENST00000654561.1	1470	3	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	454	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGTCTTGCTGTATT	0	True	NA	NA	False	NA	NA	NA	16439036	16441592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439061_16439326_16440254_16441073
transcript_39662.known	chr17	+	1201	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	8	0	7	0	multi-exon	FALSE	canonical	3	198	junction_1	1446.31037039081	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8	False	NA	-16	True	AATAAA	-30	NA	16439044	16442028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_39663.known	chr17	+	794	6	FSM	ENSG00000175061.19	ENST00000472367.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	330.790810029541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGAGGGCCTGGGTGT	8	True	NA	16	True	AAAAAG	-15	NA	16439326	16463986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439415_16439527_16439704_16440184_16440254_16462832_16462942_16463163_16463248_16463718
transcript_39664.known	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	70.7153920067383	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
transcript_39665.known	chr17	-	7639	6	FSM	ENSG00000141040.15	ENST00000395825.4	7639	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	11.3947356265953	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATATGTACAAATGCGTG	-9	True	NA	NA	False	ATTAAA	-23	NA	16569204	16546953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568951
transcript_39666.nnic	chr17	+	2409	12	NNC	ENSG00000170160.18	novel	3375	12	NA	NA	-22826	6910	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.43739893644017	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGAAATATTTTGAGG	NA	False	NA	NA	False	AATAAA	-19	NA	16666710	16734805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_16666930_16692978_16693050_16705150_16705400_16707468_16707543_16708795_16709636_16711678_16711816_16720197_16720232_16720516_16720659_16727526_16727741_16731799_16731984_16732537_16732667_16734689
transcript_3967.nic	chr1	-	821	4	ISM	ENSG00000215883.11	ENST00000528287.5	2642	8	6	17333	0	0	5prime_fragment	FALSE	canonical	3	40	junction_3	5.71547606649408	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGCATTTACTATC	-15	True	NA	-4	True	AATAAA	-15	NA	54200030	54190550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_54190897_54195418_54195716_54196368_54196492_54199975
transcript_39671.known	chr17	-	3667	14	FSM	ENSG00000154803.13	ENST00000285071.9	3667	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	10.9965029406206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACTACATGGTTTTAT	-9	True	NA	-10	True	AATAAA	-17	NA	17237168	17212211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17213857_17214984_17215091_17215184_17215317_17216379_17216504_17217068_17217183_17219018_17219210_17221536_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_39674.known	chr17	-	1692	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	8.34461820943442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTCCCAAGTTTTCCAT	20	True	NA	-7	True	AATAAA	-14	NA	17237139	17221170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_39682.known	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	648	junction_9	78.6130811565456	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-3	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_39683.nic	chr17	-	1668	12	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_11	213.070779378106	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-1	True	NA	-31	True	ATTAAA	-19	NA	17281300	17246834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_39685.known	chr17	-	1625	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	286.034413926739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTGAACATTAATG	108	False	NA	32	True	ATTAAA	-17	NA	17281191	17246836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_39688.nic	chr17	-	1521	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_10	227.604064111342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-3	True	NA	-31	True	ATTAAA	-19	NA	17281302	17246834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17281131
transcript_39692.nic	chr17	-	1481	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	229.354223854718	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-7	True	NA	-31	True	ATTAAA	-19	NA	17281306	17246834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_39703.known	chr17	-	809	7	FSM	ENSG00000141030.13	ENST00000492672.5	809	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	257.464344888547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATCTCAAATTGTGGGT	-3	True	NA	NA	False	NA	NA	NA	17281246	17261997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_39704.known	chr17	+	1581	5	FSM	ENSG00000205309.14	ENST00000389022.9	1581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.2226242670917	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	16	True	NA	18	True	AATAAA	-24	NA	17303372	17347663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344909_17346804
transcript_39705.known	chr17	+	2209	2	FSM	ENSG00000141026.6	ENST00000268711.4	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCTTTTTGTACTGA	-9	True	NA	18	True	ATTAAA	-27	NA	17476999	17493221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_17477266_17491278
transcript_3971.known	chr1	+	2356	10	FSM	ENSG00000243725.7	ENST00000371281.4	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	26.1892448002969	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTAATTTGAGGCTGG	-4	True	NA	26	True	AGTAAA	-26	NA	54715860	54742657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_39710.known	chr17	-	1021	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_6	38.4812364088728	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-18	True	NA	-10	True	AATAAA	-17	NA	17591708	17505562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_39711.nic	chr17	-	958	7	NIC	ENSG00000133027.18	novel	960	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	182.930238676448	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-21	True	NA	-10	True	AATAAA	-17	NA	17591711	17505562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591596
transcript_39714.nic	chr17	-	938	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	45	junction_4	186.861017871572	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	392	False	NA	-10	True	AATAAA	-17	NA	17591741	17505562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17576919_17577028_17591530
transcript_39717.known	chr17	-	708	5	FSM	ENSG00000133027.18	ENST00000580147.5	708	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	218.290374272436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATAAAGGCACCCTGA	7	True	NA	-36	True	NA	NA	NA	17591683	17505588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17576919_17577028_17591530
transcript_39718.known	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.20792175244519	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-5	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_39721.known	chr17	+	2064	14	FSM	ENSG00000171962.18	ENST00000313838.12	2064	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1.88736063790543	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	NA	False	NA	NA	False	AATAAA	-29	NA	17972812	18016873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_17972975_17973851_17973963_17977581_17977759_17983827_17983945_17987931_17988099_17992764_17992912_17994298_17994419_17994998_17995110_17997457_17997635_18004362_18004495_18006182_18006255_18007024_18007148_18016063_18016196_18016557
transcript_39726.known	chr17	-	1553	8	FSM	ENSG00000171953.16	ENST00000474627.8	1553	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.4553368303793	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTAAGCTGGTTGT	12	True	NA	-1	True	NA	NA	NA	18039168	18018020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
transcript_39730.nnic	chr17	+	2024	13	NNC	ENSG00000108591.10	novel	1900	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	86.1708171147415	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	-2	True	NA	24	True	AATAAA	-14	NA	18087886	18107969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104559_18104682_18106432_18106487_18107153
transcript_39731.known	chr17	+	1897	13	FSM	ENSG00000108591.10	ENST00000395726.8	1897	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	85.08312928477	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAACGGTTCCTGTTCA	-31	True	NA	14	True	AATAAA	-4	NA	18087924	18107959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106471_18107153
transcript_39733.known	chr17	+	1838	13	FSM	ENSG00000108591.10	ENST00000580055.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	86.5398110056227	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCCTGGCTCTCCTTTC	10	True	NA	-18	True	NA	NA	NA	18087965	18107927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101494_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_39739.nic	chr17	+	2600	12	NIC	ENSG00000108591.10	novel	1900	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	283	junction_7	20.4717099698806	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	-2	True	NA	24	True	AATAAA	-14	NA	18087886	18107969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_39740.known	chr17	+	2531	12	FSM	ENSG00000108591.10	ENST00000467099.6	2531	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.924312725984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTCAGACTGAGAACA	12	True	NA	25	True	AATAAA	-15	NA	18087967	18107970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093969_18098269_18098360_18099016_18099094_18099632_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_39749.known	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	117.69214077414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	51	False	NA	NA	False	NA	NA	NA	18088006	18107600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_3975.nnic	chr1	+	1964	9	NIC	ENSG00000243725.7	novel	2356	10	NA	NA	-40	0	intron_retention	FALSE	canonical	3	27	junction_7	83.1977125586996	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTAGCTGTGTGACTTC	-5	True	NA	14	True	NA	NA	NA	54715820	54742307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54737581_54737665_54741410
transcript_39753.known	chr17	+	3159	4	FSM	ENSG00000091542.9	ENST00000399138.5	3159	4	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_2	36.5908306668336	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTCTGATGTTGTTGT	1	True	NA	21	True	AATAAA	-25	NA	18183827	18209954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18185014_18194954_18195036_18206814_18206971_18208218
transcript_39754.known	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	TRUE	canonical	3	526	junction_19	152.736870873204	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-8	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_39759.nic	chr17	-	1720	10	ISM	ENSG00000177731.16	ENST00000545457.6	3975	29	11271	-5	-16	0	3prime_fragment	FALSE	canonical	3	993	junction_9	116.810493355797	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATTTTTAATATTAAA	9823	False	NA	NA	False	ATTAAA	-25	NA	18247452	18244835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168
transcript_39769.known	chr17	+	3236	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	3.85861230093008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATCTCAGTCTGTTTG	47	True	NA	NA	False	AATAAA	-31	NA	18260661	18266552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
transcript_39770.known	chr17	+	718	3	FSM	ENSG00000177427.13	ENST00000395703.8	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGACTCTGGGGCAATG	-11	True	NA	NA	False	NA	NA	NA	18260603	18263515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18260738_18262713_18262868_18263085
transcript_39771.known	chr17	-	2929	19	FSM	ENSG00000177302.15	ENST00000580095.5	2929	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	18.1053160462833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCAGGGTAGGGTAGAG	281	False	NA	NA	False	NA	NA	NA	18314703	18274803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18290556_18290687_18290841_18291028_18292644_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308350_18308425_18308881_18308942_18314598
transcript_39773.known	chr17	-	727	4	FSM	ENSG00000177302.15	ENST00000583328.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.0720922897661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTTAA	210	False	NA	NA	False	NA	NA	NA	18314774	18306549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18306967_18308350_18308425_18308881_18308942_18314598
transcript_39774.known	chr17	-	588	4	FSM	ENSG00000177302.15	ENST00000582230.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.3230081419718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGTTCAAGCGATTCTC	15	True	NA	NA	False	NA	NA	NA	18314969	18307525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18307571_18308312_18308425_18308881_18308942_18314598
transcript_39778.nic	chr17	-	1991	13	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	110.0990715472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	1	True	NA	-9	True	ATTAAA	-12	NA	18363530	18328527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18360413_18360553_18363371
transcript_39779.known	chr17	-	2527	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	35.8234883009679	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-19	True	NA	-10	True	AATAAA	-19	NA	18363550	18327872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39784.known	chr17	-	1759	11	FSM	ENSG00000176974.21	ENST00000580002.5	1759	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	88.403676394141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGTCATAATCATTTAG	-2	True	NA	-2	True	AATAAA	-14	NA	18363495	18328469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18353671_18353818_18355885_18356001_18363371
transcript_39785.known	chr17	-	1656	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	79.5537554110427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	80	False	NA	-9	True	ATTAAA	-12	NA	18363451	18328527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39789.nnic	chr17	-	2275	10	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	93.7195711934885	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-7	True	NA	-10	True	AATAAA	-19	NA	18363538	18327872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_3979.known	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-3	True	NA	-15	True	AATAAA	-16	NA	54764523	54756897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54759191_54764460
transcript_39790.nnic	chr17	-	1620	10	NIC	ENSG00000176974.21	novel	1656	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	93.7195711934885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	-7	True	NA	-9	True	ATTAAA	-12	NA	18363538	18328527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_39794.nnic	chr17	+	989	3	NNC	ENSG00000220161.4	novel	1871	2	NA	NA	556	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCACGGTTTGTAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	18411714	18414380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_18412338_18412663_18412799_18414149
transcript_39795.nic	chr17	-	1331	3	ISM	ENSG00000240445.6	ENST00000395675.7	5859	4	-3	12216	-3	906	5prime_fragment	FALSE	canonical	3	25	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTGAATTTAGGCGG	NA	False	NA	NA	False	NA	NA	NA	18682317	18679844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_18680830_18681614_18681847_18682203
transcript_39796.known	chr17	-	504	2	FSM	ENSG00000240445.6	ENST00000443457.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCCCAGGTGAGTGAGT	420	False	NA	NA	False	NA	NA	NA	18681818	18680750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18680830_18681393
transcript_398.known	chr1	-	3163	12	FSM	ENSG00000078369.18	ENST00000378609.9	3163	12	0	0	0	0	multi-exon	FALSE	canonical	3	1627	junction_11	327.328025631226	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGGTGATTATTT	7	True	NA	-4	True	AATAAA	-19	NA	1891087	1785285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
transcript_3980.known	chr1	-	4233	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	0	0	0	multi-exon	FALSE	canonical	3	2242	junction_1	204.988261859064	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCGTTTCTTGCTTGG	-13	True	NA	-1	True	AATAAA	-19	NA	54887195	54849626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_39802.nnic	chr17	+	1029	7	NNC	ENSG00000108448.23	novel	576	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5.28099317258495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-12	True	NA	9	True	AATAAA	-16	NA	18697991	18736112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18735764
transcript_39804.known	chr17	+	815	5	FSM	ENSG00000108448.23	ENST00000449697.8	836	5	21	0	18	0	multi-exon	FALSE	canonical	0	0	junction_4	5.35607132140714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTTAATCTATTTCCT	24	False	NA	11	True	AATAAA	-23	NA	18698027	18704547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704128
transcript_39805.known	chr17	+	1049	7	FSM	ENSG00000171928.14	ENST00000574294.5	1049	7	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	132.056069741438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGCATTTTGATCCA	NA	False	NA	NA	False	AATGAA	-26	NA	18781110	18805895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352_18789436_18790895_18790961_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_39807.known	chr17	+	1876	7	FSM	ENSG00000171928.14	ENST00000307767.13	1876	7	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	46.1398839279954	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	-2	True	NA	NA	False	TATAAA	-21	NA	18781182	18806714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_3981.nnic	chr1	+	1053	4	NNC	ENSG00000143001.5	novel	1256	3	NA	NA	-82	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.09120616516523	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGACTCTATGAGTTG	NA	False	NA	5	True	AATAAA	-16	NA	54980545	54992288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_54980669_54980953_54981081_54986096_54986447_54991835
transcript_39810.known	chr17	+	2989	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	106.452519410716	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	50	False	NA	NA	False	TATAAA	-21	NA	18781313	18806714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_39813.known	chr17	+	718	6	FSM	ENSG00000171928.14	ENST00000571018.5	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	131.797420308593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTTTGTTTTTCCAC	NA	False	NA	NA	False	NA	NA	NA	18781142	18805661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352_18789436_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_39816.known	chr17	+	336	2	FSM	ENSG00000171928.14	ENST00000582288.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTAATTCTGTGCTAT	23	False	NA	NA	False	TTTAAA	-30	NA	18781286	18789669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18781306_18789352
transcript_39817.known	chr17	+	985	1	FSM	ENSG00000265478.2	ENST00000584957.2	985	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAATGGTGGAGTATGG	NA	False	NA	NA	False	ATTAAA	-21	NA	18809955	18810940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18810000_18810900
transcript_3983.known	chr1	+	3637	12	FSM	ENSG00000169174.11	ENST00000302118.5	3637	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	19.2684386308992	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATAGACTTGACTG	5	True	NA	19	True	AATAAA	-22	NA	55039547	55064852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_55040045_55043842_55044035_55046522_55046647_55052277_55052412_55052649_55052792_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
transcript_39833.nic	chr17	+	1814	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	3	-53	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	66.1202692069535	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	65	False	NA	31	True	AATAAA	-28	NA	18858106	18931215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39834.nic	chr17	+	1867	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	66.1202692069535	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	65	False	NA	16	True	AATAAA	-17	NA	18858106	18931268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_3984.known	chr1	+	573	4	FSM	ENSG00000223956.4	ENST00000451914.2	573	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTAGGTTCGCTAT	-6	True	NA	8	True	AATAAA	-22	NA	56414934	56415966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_56415151_56415247_56415343_56415532_56415610_56415781
transcript_39840.known	chr17	+	1540	10	FSM	ENSG00000141127.15	ENST00000395656.6	1540	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	99.6907564099112	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAATAAAATAA	-13	True	NA	NA	False	NA	NA	NA	18858136	18931024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39846.known	chr17	+	1958	12	FSM	ENSG00000141127.15	ENST00000268835.7	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	56.297615292331	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	-19	True	NA	35	True	AATAAA	-36	NA	18858130	18931287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_39847.known	chr17	-	5226	6	FSM	ENSG00000188522.15	ENST00000388995.11	5226	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	20.7980768341691	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTTGTTATTGAATCT	-3	True	NA	0	True	AATAAA	-30	NA	19004764	18968788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_18971749_18977583_18978851_18979548_18979674_18988246_18988415_19003519_19004170_19004708
transcript_39848.nnic	chr17	+	1130	3	NNC	ENSG00000228157.4	novel	1176	2	NA	NA	-3526	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19089447	19094307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_19089641_19093212_19093307_19093464
transcript_3985.known	chr1	+	9355	9	FSM	ENSG00000162409.12	ENST00000371244.9	9355	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	8.67107259801231	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTCTGCTCCATCA	-31	True	NA	15	True	ATTAAA	-25	NA	56645313	56715335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_56645482_56674380_56674523_56691393_56691488_56692357_56692503_56693764_56693853_56695934_56696160_56703970_56704476_56706091_56706219_56707474
transcript_39851.nnic	chr17	+	1136	3	NNC	ENSG00000281856.1	novel	1173	2	NA	NA	-3535	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19215607	19220473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_19215810_19219381_19219476_19219633
transcript_39853.known	chr17	-	923	7	FSM	ENSG00000108641.20	ENST00000461069.6	923	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	87.5195216318432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACCTTCTGTATATT	-7	True	NA	-6	True	AATAAA	-13	NA	19362614	19340920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19341327_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39855.nnic	chr17	-	812	7	NNC	ENSG00000108641.20	novel	913	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	83.5452305972971	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTAGGCCTGGGGCTGCCT	-12	True	NA	-6	True	AATAAA	-17	NA	19362723	19343174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_19343361_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39856.nic	chr17	-	949	7	NIC	ENSG00000108641.20	novel	913	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	87.1577433291054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTAGGCCTGGGGCTGCCT	-14	True	NA	-6	True	AATAAA	-17	NA	19362725	19343174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_19343496_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39857.known	chr17	-	733	7	FSM	ENSG00000108641.20	ENST00000395616.7	733	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	83.5452305972971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTTCTCAGGGCTTTGT	10	True	NA	NA	False	NA	NA	NA	19362733	19343453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19343551_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39858.known	chr17	-	1031	7	FSM	ENSG00000108641.20	ENST00000261499.11	913	7	0	-118	0	0	multi-exon	FALSE	canonical	3	139	junction_1	40.8275506109403	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-12	True	NA	NA	False	NA	NA	NA	19362723	19343056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39860.known	chr17	-	744	7	FSM	ENSG00000108641.20	ENST00000642870.2	744	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	83.7531093950149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCCTAGGCCTGGGGCT	-2	True	NA	-10	True	AATAAA	-13	NA	19377910	19343178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19377858
transcript_39861.known	chr17	-	1346	6	FSM	ENSG00000108641.20	ENST00000647252.1	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	22.969545054267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	1	True	NA	NA	False	NA	NA	NA	19362710	19343056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39862.known	chr17	-	601	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	89.515585235198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAGTATGAGTCAGAC	201	False	NA	-6	True	ATTAAA	-19	NA	19362542	19346949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_39864.known	chr17	-	1932	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	34.1970758983864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-7	True	NA	-12	True	AATAAA	-20	NA	19387190	19383441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
transcript_39865.known	chr17	-	1820	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	10.6282642044691	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTCAGGGGGAGTTG	-7	True	NA	-15	True	AATAAA	-17	NA	19387190	19383444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
transcript_39871.known	chr17	+	2902	7	FSM	ENSG00000166484.20	ENST00000395604.8	2902	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	57.5634915163731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	-13	True	NA	24	True	AATACA	-21	NA	19378497	19383544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_39872.known	chr17	+	3280	17	FSM	ENSG00000142494.13	ENST00000270570.8	3280	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	3.18198051533946	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTCTACATTTTTGA	2	True	NA	NA	False	AATAAA	-15	NA	19533853	19579034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19534075_19542392_19542495_19546434_19546504_19547984_19548134_19549634_19549678_19551423_19551469_19555211_19555310_19555592_19555691_19555795_19555910_19555994_19556063_19560187_19560297_19560417_19560494_19566789_19566860_19567095_19567229_19571477_19571573_19572779_19572862_19577326
transcript_39875.known	chr17	+	3828	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	143.379252334499	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
transcript_39877.known	chr17	+	1708	11	FSM	ENSG00000072210.19	ENST00000672357.1	1708	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	108.779777532407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATATGCAAAC	NA	False	NA	-73	True	AATGAA	-28	NA	19648722	19675664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19648844_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_39880.known	chr17	+	3703	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	40.2246776414433	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_39885.known	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	120.922431231761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	11	False	NA	5	True	AATAAA	-13	NA	19648805	19675742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
transcript_39886.known	chr17	+	1524	9	FSM	ENSG00000072210.19	ENST00000672567.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	123.768937944866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	141	False	NA	NA	False	NA	NA	NA	19649080	19685700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19685274
transcript_39887.known	chr17	+	3822	9	FSM	ENSG00000072210.19	ENST00000631291.2	3822	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	114.945571358796	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGATGGTATTTGTCA	NA	False	NA	19	True	TATAAA	-16	NA	19648525	19677590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19671720_19671957_19675557
transcript_39888.known	chr17	+	3276	8	FSM	ENSG00000072210.19	ENST00000395575.7	3276	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	129.20052441923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGACAATCCTTTGA	20	True	NA	-40	True	NA	NA	NA	19648785	19677531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_39891.known	chr17	-	1925	10	FSM	ENSG00000108602.18	ENST00000457500.6	1925	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	1.9436506316151	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCAGGCATATGGCAC	7637	False	NA	NA	False	AATAAA	-27	NA	19745459	19737987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19738236_19738322_19738454_19738995_19739096_19739507_19739675_19740335_19740478_19741092_19741211_19742003_19742213_19742544_19742631_19743231_19743464_19744967
transcript_39892.known	chr17	-	3908	28	FSM	ENSG00000083290.20	ENST00000361658.6	3908	28	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	12.966031382874	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	0	True	NA	-4	True	AATAAA	-22	NA	19867936	19770829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19771068_19776308_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_39893.known	chr17	-	9149	27	FSM	ENSG00000083290.20	ENST00000395544.9	9149	27	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_16	10.2467342177973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	0	True	NA	-4	True	AATAAA	-22	NA	19867936	19770829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_39897.known	chr17	-	4063	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	21.0203982563876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCGGCTACTTTT	-7	True	NA	NA	False	TATAAA	-16	NA	19977828	19904301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_39900.known	chr17	-	1815	14	FSM	ENSG00000108599.15	ENST00000395536.7	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	38.7480100653397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAACTTGAGATAAAGG	142	False	NA	NA	False	NA	NA	NA	19977679	19906226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_39907.known	chr17	+	3081	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	79.3473376995095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACGTGTGAAGAAAAA	-9	True	NA	NA	False	NA	NA	NA	20156057	20239273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_39908.nic	chr17	+	1247	5	ISM	ENSG00000128487.19	ENST00000395525.7	2536	6	49385	0	-266	0	3prime_fragment	FALSE	canonical	3	38	junction_4	69.9870523739927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGTCTTATGAAAAGT	1136	False	NA	NA	False	AATAAA	-23	NA	20205473	20237179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_39910.known	chr17	-	1184	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTTTTTTTTTAAAT	NA	False	NA	NA	False	AATAAA	-36	NA	20009234	20008050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_20008000_20009200
transcript_39911.nic	chr17	+	1669	5	NIC	ENSG00000233098.10	novel	1488	4	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	16.1941347407016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	42	False	NA	NA	False	AATAAA	-29	NA	20868568	20930046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_20868686_20887591_20887850_20892229_20892433_20924358_20924834_20929430
transcript_39913.nic	chr17	+	1493	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	0	-5	0	0	multi-exon	FALSE	canonical	3	15	junction_2	14.4299072146089	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	-2	True	NA	NA	False	AATAAA	-29	NA	20868486	20930046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
transcript_39914.known	chr17	+	3727	4	FSM	ENSG00000233098.10	ENST00000577537.5	3727	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.34209919681348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	230	False	NA	NA	False	AATAAA	-20	NA	20868432	20905230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20902217
transcript_39915.known	chr17	+	3382	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	31	False	NA	NA	False	AATAAA	-20	NA	20868519	20905230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20892229_20892433_20902217
transcript_39917.known	chr17	+	1257	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	36	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	15	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	31	False	NA	NA	False	AATAAA	-29	NA	20868519	20930046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_20868686_20924358_20924834_20929430
transcript_3992.nnic	chr1	-	678	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-9	1408	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	42.6692707538653	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-21	True	NA	NA	False	AATAAA	-18	NA	57424069	57144008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423929
transcript_39920.known	chr17	+	1910	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	21126963	21128873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_21127000_21128900
transcript_39921.known	chr17	-	827	4	FSM	ENSG00000178307.10	ENST00000583929.1	827	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.9620697104393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGATCTCCTGGCAGTT	-9	True	NA	NA	False	NA	NA	NA	21214176	21198539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21208391_21208540_21210935_21211228_21214090
transcript_39922.known	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	16	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	6	True	NA	-11	True	ATTAAA	-13	NA	21214161	21197957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21210935_21211228_21214090
transcript_39923.known	chr17	-	819	3	FSM	ENSG00000178307.10	ENST00000583264.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	46.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGAGGCAGCAGA	4	True	NA	NA	False	NA	NA	NA	21214163	21198255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21211066_21211228_21214090
transcript_39924.known	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	0	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	6	True	NA	-7	True	ATTAAA	-17	NA	21214161	21197953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_21198841_21214090
transcript_39925.known	chr17	+	1152	2	FSM	ENSG00000235530.7	ENST00000580291.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTGGGTCAGAGTGT	-13	True	NA	NA	False	AATAAA	-23	NA	21214330	21219120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_21214451_21218088
transcript_39926.known	chr17	+	2256	12	FSM	ENSG00000034152.19	ENST00000342679.9	2256	12	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	14.7911074468456	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	1	True	NA	102	True	ATTAAA	-17	NA	21284710	21315232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_21284970_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
transcript_39932.nnic	chr17	+	2299	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_6	181.757333813692	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	NA	False	NA	NA	False	AATACA	-10	NA	27294056	27312887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39937.known	chr17	+	4187	9	FSM	ENSG00000109046.15	ENST00000467843.6	4187	9	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_5	105.785159639715	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	NA	False	NA	38	True	ATTAAA	-20	NA	27294092	27313631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39940.known	chr17	+	5105	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_5	141.619593895054	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	2	True	NA	2	True	AATAAA	-15	NA	27294113	27315926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39948.nic	chr17	+	4340	8	NIC	ENSG00000109046.15	novel	4187	9	NA	NA	-19	0	intron_retention	FALSE	canonical	3	515	junction_1	61.7344543763275	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	NA	False	NA	NA	False	AATACA	-10	NA	27294056	27312887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39956.known	chr17	+	1611	7	FSM	ENSG00000109046.15	ENST00000348811.6	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	257.474917872272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	19	False	NA	NA	False	AATACA	-10	NA	27294130	27312887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_39957.nic	chr17	+	1514	6	ISM	ENSG00000109046.15	ENST00000467843.6	4187	9	-36	5424	-19	0	5prime_fragment	FALSE	canonical	3	323	junction_5	94.4046609018856	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	27294056	27308207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743
transcript_39958.known	chr17	+	1900	5	FSM	ENSG00000109046.15	ENST00000581185.5	1900	5	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	32.5614803103299	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACACAGGCGCACAATGG	2	True	NA	NA	False	NA	NA	NA	27294113	27307789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781
transcript_39960.known	chr17	+	544	2	FSM	ENSG00000109046.15	ENST00000584354.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAGTGTAGGGTAATAA	2	True	NA	NA	False	NA	NA	NA	27294113	27302009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_27294436_27301787
transcript_39961.known	chr17	-	807	5	FSM	ENSG00000232859.10	ENST00000508862.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7539677541881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGCAATAAGATGAAGGT	NA	False	NA	NA	False	AAGAAA	-43	NA	27893383	27879050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_27879491_27880120_27880184_27880273_27880367_27882568_27882713_27893316
transcript_39965.nnic	chr17	-	1485	4	NNC	ENSG00000232859.10	novel	1419	4	NA	NA	3111	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	16.9705627484771	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	4146	False	NA	-5	True	AGTAAA	-18	NA	27889210	27878357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_27879491_27880273_27880367_27882568_27882713_27889095
transcript_39966.known	chr17	-	1419	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	12.2565175405668	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-9	True	NA	-5	True	AGTAAA	-18	NA	27893365	27878357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
transcript_39968.nnic	chr17	-	1275	3	NIC	ENSG00000232859.10	novel	1419	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-9	True	NA	-5	True	AGTAAA	-18	NA	27893365	27878357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_27879491_27880273_27880367_27893316
transcript_39970.nnic	chr17	+	3000	12	NNC	ENSG00000087095.13	novel	1702	12	NA	NA	-30	0	intron_retention	FALSE	canonical	2	5	junction_1	40.0101226860825	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCATCTGTTTTATT	NA	False	NA	18	True	ATTAAA	-17	NA	28041706	28196381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_28041780_28043275_28043332_28122602_28122733_28132619_28132676_28161159_28161267_28163542_28163629_28168447_28168658_28172516_28172619_28185178_28185266_28191020_28191220_28192119_28192214_28194581
transcript_39978.known	chr17	+	695	3	FSM	ENSG00000087095.13	ENST00000583517.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTTATTCTTGGGG	-2	True	NA	NA	False	NA	NA	NA	28041736	28048324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28041780_28043087_28043332_28047916
transcript_39980.known	chr17	-	852	6	FSM	ENSG00000109083.14	ENST00000585313.5	852	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	73.4373202125459	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAATGGCTTGATGTA	26	True	NA	-25	True	AATAAA	-7	NA	28335439	28328336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
transcript_39981.known	chr17	-	1071	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	53.3906358830835	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGATGTACCTTTTTT	16	True	NA	-17	True	AATAAA	-15	NA	28335449	28328328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_39982.known	chr17	-	831	5	FSM	ENSG00000109083.14	ENST00000578985.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	56.9138603505332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAACTTGTTAATATCA	25	True	NA	NA	False	AATAAA	-23	NA	28335440	28328998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_39983.known	chr17	-	860	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	28.2001773044071	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-7	True	NA	-14	True	AATAAA	-18	NA	28335472	28328325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
transcript_39985.known	chr17	+	1075	2	FSM	ENSG00000109084.14	ENST00000582384.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGTGTATCACCTGT	86	False	NA	-50	True	ACTAAA	-17	NA	28319268	28327511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28319366_28326533
transcript_39986.known	chr17	+	2463	3	FSM	ENSG00000109084.14	ENST00000226230.8	2463	3	0	0	0	0	multi-exon	TRUE	canonical	3	1015	junction_1	19	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	17	True	NA	12	True	AATAAA	-17	NA	28319199	28328685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28319366_28325502_28325648_28326533
transcript_39987.known	chr17	-	774	4	FSM	ENSG00000109083.14	ENST00000588477.5	774	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.9814793641114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTACCTTTTTTCCTG	-24	True	NA	-13	True	AATAAA	-19	NA	28335489	28328324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28328734_28330442_28330529_28331858_28331988_28335339
transcript_39988.known	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	5.76387215526353	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	-2	True	NA	9	True	AATAAA	-17	NA	28335760	28347009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_39992.known	chr17	-	1626	8	FSM	ENSG00000109072.14	ENST00000226218.9	1626	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_3	4.05069910821652	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATTATTGTTCTGA	-9	True	NA	-4	True	AATAAA	-17	NA	28370307	28367283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28367482_28367714_28368060_28368520_28368674_28368871_28369029_28369288_28369429_28369506_28369852_28369926_28370047_28370139
transcript_39997.known	chr17	+	3082	6	FSM	ENSG00000244045.13	ENST00000292114.8	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	5.34415568635495	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTATCTTTGCTTCAT	-9	True	NA	19	True	ATTAAA	-16	NA	28357646	28363683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361156
transcript_4.known	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00009_+_0_1000
transcript_40.known	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00111_+_0_1000
transcript_400.known	chr1	-	3145	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	0	0	0	multi-exon	TRUE	canonical	3	386	junction_10	664.31655857731	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-23	True	NA	-3	True	AATAAA	-20	NA	1891117	1785284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
transcript_4000.nic	chr1	-	1976	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	24.7941525364349	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	58546802	58480718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
transcript_40004.known	chr17	+	585	1	FSM	ENSG00000263266.2	ENST00000571702.1	585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATGACTAAATAAAA	42	False	NA	NA	False	NA	NA	NA	28467821	28468406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28467800_28468400
transcript_40005.known	chr17	-	1379	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	31.4880929876676	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-15	True	NA	-8	True	AATAAA	-18	NA	28552624	28546707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
transcript_40007.known	chr17	-	2529	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_11	24.4729569082837	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-4	True	NA	-5	True	AATAAA	-29	NA	28571524	28553386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
transcript_40009.known	chr17	-	2397	11	FSM	ENSG00000087111.21	ENST00000268758.13	2397	11	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_10	91.1754352882398	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTACTCTTTCT	-8	True	NA	-1	True	AATAAA	-33	NA	28571528	28553382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571462
transcript_4001.nic	chr1	-	1900	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	30.797727188869	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-23	True	NA	NA	False	AATAAA	-19	NA	58546752	58480718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546689
transcript_40015.known	chr17	-	2815	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_7	21.6168915434204	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-16	True	NA	-5	True	AATAAA	-29	NA	28571536	28553386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
transcript_40016.known	chr17	-	1722	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_9	62.1118067939573	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGTCTGTTTTACA	7643	False	NA	0	True	AATAAA	-19	NA	28576948	28573114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
transcript_40017.known	chr17	-	1608	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_8	21.9598354957409	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTACTTTGCCTGTCTGTT	3	True	NA	-5	True	AATAAA	-14	NA	28576895	28573119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
transcript_4002.known	chr1	-	1861	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.7561183575623	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	3	True	NA	NA	False	AATAAA	-19	NA	58546726	58480718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_40023.nic	chr17	-	3194	24	NIC	ENSG00000076382.17	novel	3786	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_22	139.549884028347	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-6	True	NA	-13	True	AATAAA	-15	NA	28599025	28577573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28592475_28598509_28598636_28598895
transcript_40025.known	chr17	-	3786	24	FSM	ENSG00000076382.17	ENST00000321765.10	3786	24	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_17	70.0284036351678	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-6	True	NA	-13	True	AATAAA	-15	NA	28599025	28577573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
transcript_40031.known	chr17	-	1582	11	FSM	ENSG00000007202.15	ENST00000580882.5	1582	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	28.1211664053965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATGATAAGGAATGTC	-10	True	NA	NA	False	AATAAA	-17	NA	28645155	28639060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_40035.known	chr17	-	7428	39	FSM	ENSG00000007202.15	ENST00000528896.7	7428	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	74.1777503208292	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCATTTTTGTGTGTGTG	-13	True	NA	-10	True	AAAAAG	-16	NA	28645158	28614445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28617000_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_40038.known	chr17	-	735	4	FSM	ENSG00000132581.10	ENST00000591903.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	135.381764733003	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCCTGCCACAAGTTC	340	False	NA	NA	False	NA	NA	NA	28661819	28648924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28661725
transcript_40039.known	chr17	-	583	4	FSM	ENSG00000132581.10	ENST00000587338.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	5.24933858267454	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGACCTATCAGTGGGCA	-30	True	NA	NA	False	NA	NA	NA	28662189	28649126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28662045
transcript_40040.known	chr17	-	1309	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	11	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTATCTGTTACTGC	3	True	NA	NA	False	AATAAA	-17	NA	28661906	28648345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28655286_28655484_28661725
transcript_40041.known	chr17	-	1025	3	FSM	ENSG00000132581.10	ENST00000592250.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	130.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-26	True	NA	-3	True	GATAAA	-20	NA	28662185	28648588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28649277_28655286_28655484_28662045
transcript_40043.nic	chr17	+	811	5	ISM	ENSG00000109111.15	ENST00000314616.11	6404	37	-267	27680	-260	0	5prime_fragment	FALSE	canonical	3	284	junction_4	8.26135582092915	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACGAGGACGATGACGA	2	True	NA	-32	True	NA	NA	NA	28661937	28674999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969
transcript_40046.nic	chr17	-	1428	4	NIC	ENSG00000167525.15	novel	1566	4	NA	NA	69	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.7919455049082	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	9826	False	NA	-5	True	AATAAA	-18	NA	28711017	28703196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28704213_28704306_28704436_28704707_28704844_28710870
transcript_40047.known	chr17	-	1566	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	20.4993224820291	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	12	True	NA	-5	True	AATAAA	-18	NA	28711854	28703196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
transcript_40049.known	chr17	-	1007	4	FSM	ENSG00000167525.15	ENST00000579650.5	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	23.3285709425636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCGCCACCGCCTCCC	-6	True	NA	NA	False	NA	NA	NA	28711299	28704080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28704213_28704306_28704617_28704707_28704844_28710870
transcript_40055.nnic	chr17	-	2069	3	NIC	ENSG00000167525.15	novel	1684	5	NA	NA	-424	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	30.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	8531	False	NA	-5	True	AATAAA	-18	NA	28712312	28703196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28704213_28704306_28704617_28711569
transcript_40056.nic	chr17	-	1700	3	NIC	ENSG00000167525.15	novel	1566	4	NA	NA	69	0	intron_retention	FALSE	canonical	3	9	junction_2	26.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	9826	False	NA	-5	True	AATAAA	-18	NA	28711017	28703196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28704213_28704306_28704844_28710870
transcript_40059.known	chr17	-	766	2	FSM	ENSG00000167525.15	ENST00000581289.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTCACAAGCCAGGAAGG	9096	False	NA	NA	False	AAAAAG	-12	NA	28711747	28703624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28704213_28711569
transcript_40062.known	chr17	-	863	11	FSM	ENSG00000109113.20	ENST00000436730.7	863	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	357.163883952451	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGCCCAGCCCTAGG	18	True	NA	NA	False	NA	NA	NA	28718161	28714624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_40063.known	chr17	-	1592	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	356.879825711681	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	6	True	NA	-1	True	ATTAAA	-19	NA	28718415	28714283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_40064.nnic	chr17	-	1413	11	NIC	ENSG00000109113.20	novel	1592	11	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_10	375.680835284421	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-4	True	NA	-1	True	ATTAAA	-19	NA	28718484	28714283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718369
transcript_40066.known	chr17	-	1184	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	446.390871322432	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	13	True	NA	-2	True	ATTAAA	-18	NA	28718166	28714284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_40067.nic	chr17	-	1549	11	NIC	ENSG00000109113.20	novel	1592	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_10	446.187225276565	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-2	True	NA	-1	True	ATTAAA	-19	NA	28718396	28714283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_40078.known	chr17	-	1293	10	FSM	ENSG00000109113.20	ENST00000415040.6	1293	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	500.585163756218	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	-4	True	NA	-2	True	ATTAAA	-18	NA	28718183	28714284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28716902_28716995_28717212_28717426_28718121
transcript_4008.nic	chr1	-	1750	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	41.3511592019733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-23	True	NA	NA	False	AATAAA	-19	NA	58546752	58480718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546689
transcript_40084.nic	chr17	-	1547	9	NIC	ENSG00000109113.20	novel	1741	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_8	396.165980840102	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	9151	False	NA	-1	True	ATTAAA	-19	NA	28717766	28714283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28717212
transcript_40085.known	chr17	-	914	9	FSM	ENSG00000109113.20	ENST00000430132.6	914	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_8	430.744685834892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGGCTGAGGAGACTGT	9532	False	NA	NA	False	NA	NA	NA	28718405	28714646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28718121
transcript_4009.nic	chr1	-	1787	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	45.0328678153354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	58546802	58480718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_58481175_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_40097.known	chr17	-	1597	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	345.438851318146	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	5	True	NA	-1	True	ATTAAA	-19	NA	28717748	28714283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_40100.known	chr17	+	3573	15	FSM	ENSG00000160602.14	ENST00000268766.11	3573	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.4892247247004	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	-8	True	NA	12	True	AATAAA	-14	NA	28728787	28743455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28728861_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737515_28737674_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
transcript_40109.known	chr17	+	580	6	FSM	ENSG00000198242.14	ENST00000394935.7	580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6717.78128253667	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATGCCTGTCTGTCA	9	True	NA	55	True	AATATA	-23	NA	28720263	28723933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720329_28720413_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_4011.known	chr1	-	7751	20	FSM	ENSG00000162601.11	ENST00000472487.6	7751	20	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_15	42.4312381659924	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	3	True	NA	-21	True	AATAAA	-15	NA	58700062	58654742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_40111.known	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	5901.40197326025	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	-11	True	NA	58	True	AATATA	-26	NA	28720243	28723936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_40115.known	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	2.94392028877595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-12	True	NA	1	True	AATGAA	-15	NA	28726233	28724347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
transcript_40116.known	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	119.04714285619	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	1005	False	NA	-104	True	NA	NA	NA	28726932	28724452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
transcript_40117.known	chr17	-	578	4	FSM	ENSG00000160606.11	ENST00000580518.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	108.677913528412	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTACTTTTCCCGCCTC	2	True	NA	NA	False	NA	NA	NA	28727935	28724598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28727818
transcript_40119.known	chr17	+	590	2	FSM	ENSG00000160602.14	ENST00000581000.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTAGCCGGGTG	18	False	NA	NA	False	AATACA	-6	NA	28728813	28734525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28728861_28733982
transcript_40120.known	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	11065	junction_1	1714.97208432091	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	3	True	NA	35	True	AATAAA	-23	NA	28719984	28724359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_40126.known	chr17	+	1841	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_9	42.2727767519593	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	-5	True	NA	33	True	AATAAA	-22	NA	28855015	28861061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
transcript_40127.nic	chr17	+	1754	10	NIC	ENSG00000132591.12	novel	1841	10	NA	NA	-53	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_9	171.582683520076	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	NA	False	NA	33	True	AATAAA	-22	NA	28854956	28861061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860576
transcript_4014.nic	chr1	-	1189	8	ISM	ENSG00000162601.11	ENST00000659812.1	3533	20	-81	22915	-3	-5111	5prime_fragment	FALSE	canonical	3	101	junction_3	45.6874921480213	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAACAAGCAAT	3128	False	NA	NA	False	AATAGA	-23	NA	58700080	58681882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_40141.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583522.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	33.431833632034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	NA	False	NA	-18	True	AGTAAA	-15	NA	28842839	28755979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759765_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_40142.known	chr17	-	4169	4	FSM	ENSG00000173065.14	ENST00000581229.6	4169	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	148.728686614998	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	4	True	NA	-18	True	AGTAAA	-15	NA	28842783	28755979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28842681
transcript_40144.known	chr17	-	4050	4	FSM	ENSG00000173065.14	ENST00000577682.6	4050	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	16.539514973407	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759765_28766585_28766708_28834292_28834327_28842681
transcript_40146.known	chr17	-	4162	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	145.249976094854	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
transcript_40147.known	chr17	-	4246	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	31.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	1	True	NA	-18	True	AGTAAA	-15	NA	28812435	28755979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28812208
transcript_40148.known	chr17	-	4128	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	142	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759877_28766585_28766708_28842681
transcript_40150.known	chr17	-	4010	3	FSM	ENSG00000173065.14	ENST00000582266.6	4010	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	3	True	NA	-18	True	AGTAAA	-15	NA	28842784	28755979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28759765_28766585_28766708_28842681
transcript_40153.known	chr17	-	2668	11	FSM	ENSG00000132589.16	ENST00000394908.9	2668	11	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_5	106.818584525353	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-61	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
transcript_40154.known	chr17	-	2585	11	FSM	ENSG00000132589.16	ENST00000585169.5	2585	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	502.67866475513	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCTGCATTGTGTCTTC	20	True	NA	-9	True	AATAAA	-15	NA	28897652	28879340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28885856_28885948_28888944_28889027_28897525
transcript_40156.nnic	chr17	-	2527	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_9	394.001410036958	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-2	True	NA	-7	True	AATAAA	-17	NA	28897674	28879338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28897525
transcript_40158.nnic	chr17	-	1694	4	NIC	ENSG00000167536.14	novel	1929	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	20	junction_3	108.077132949883	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-12	True	NA	-12	True	AATAAA	-15	NA	28902966	28897783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_28898893_28900989_28901302_28901492_28901617_28902817
transcript_40159.known	chr17	-	1569	3	FSM	ENSG00000167536.14	ENST00000426464.2	1569	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	106.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-11	True	NA	-12	True	AATAAA	-15	NA	28902965	28897783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28898893_28900989_28901302_28902817
transcript_4016.known	chr1	-	378	5	FSM	ENSG00000162601.11	ENST00000483003.5	378	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	24.3451740597598	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTTAAAAATTATGGAAT	-7	True	NA	-128	True	TATAAA	-11	NA	58700072	58690187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_40162.nnic	chr17	+	2059	8	NNC	ENSG00000179761.12	novel	1772	10	NA	NA	-10770	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	72.9246186140181	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	NA	False	NA	28	True	AATAAA	-33	NA	29032370	29057216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_29032460_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_40163.known	chr17	+	2169	8	FSM	ENSG00000179761.12	ENST00000323372.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	18.5075825608019	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	5	True	NA	28	True	AATAAA	-33	NA	29043140	29057216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_29043340_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_40168.known	chr17	-	4506	15	FSM	ENSG00000109118.14	ENST00000332830.9	4506	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_14	24.9591502995088	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGACTGTCTGTC	-26	True	NA	-9	True	TATAAA	-19	NA	28951518	28905249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_28906518_28906855_28906995_28907589_28907673_28908782_28908882_28910225_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
transcript_4017.known	chr1	-	698	3	FSM	ENSG00000162601.11	ENST00000489282.1	698	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTTTCCCTACATT	-12	True	NA	NA	False	AATAAA	-26	NA	58700077	58692405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_58692932_58695128_58695208_58699984
transcript_40171.nic	chr17	-	1333	2	ISM	ENSG00000063015.21	ENST00000442608.7	3805	16	9	25666	9	753	5prime_fragment	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGCTCATGCCTGTA	550	False	NA	-7	True	AATAAA	-13	NA	29005904	28980796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_28982040_29005814
transcript_40172.known	chr17	-	10877	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	10.3708994574027	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTTGTTATCTTTT	-1	True	NA	-13	True	AATAAA	-16	NA	29294148	29255838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
transcript_40177.known	chr17	-	559	3	FSM	ENSG00000108256.9	ENST00000579665.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	73.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATACATATATATATAT	1	True	NA	NA	False	AATATA	-12	NA	29294115	29264398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29264592_29267497_29267531_29293782
transcript_4018.nic	chr1	-	864	4	NIC	ENSG00000235215.2	novel	317	3	NA	NA	-165	1864	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGCATTTCTGTGTCC	NA	False	NA	5	True	AATAAA	-19	NA	59078281	59054134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_59054531_59056012_59056186_59059637_59059683_59078031
transcript_40180.known	chr17	-	341	1	FSM	ENSG00000239256.1	ENST00000492004.1	341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	29340822	29340481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29340500_29340800
transcript_40184.known	chr17	-	965	8	FSM	ENSG00000141298.19	ENST00000579040.5	965	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.0709255283711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTACATCTATATCAT	34	True	NA	NA	False	AATAAA	-32	NA	29930173	29673900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29674160_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
transcript_40185.known	chr17	-	560	3	FSM	ENSG00000141298.19	ENST00000582084.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTTTTCTGTAGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	29930276	29925216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29925556_29929937_29930041_29930158
transcript_40186.known	chr17	-	570	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTGATACCTATATT	-21	True	NA	NA	False	NA	NA	NA	29930228	29925276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_29925556_29929937
transcript_4019.known	chr1	-	317	3	FSM	ENSG00000235215.2	ENST00000451090.1	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTCACATTGAT	NA	False	NA	NA	False	NA	NA	NA	59078116	59055998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_59056186_59059637_59059683_59078031
transcript_40197.known	chr17	+	1242	8	FSM	ENSG00000126653.18	ENST00000475652.5	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	177.605386937975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGAACCGACCCAGTG	9	True	NA	16	True	AAGAAA	-17	NA	30116828	30185193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_40205.known	chr17	+	2506	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	78.9444248963929	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCATTTATTTTAAAA	-4	True	NA	19	True	AATAAA	-22	NA	30116815	30186475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_40211.known	chr17	+	1800	7	FSM	ENSG00000126653.18	ENST00000394826.8	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	200.452543566357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGAGTGTGTTACCAG	0	True	NA	-14	True	NA	NA	NA	30116819	30185744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30156539_30156663_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_40212.known	chr17	+	774	7	FSM	ENSG00000126653.18	ENST00000580103.6	774	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	145.914072887665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCAAGGGGCTTCTC	352	False	NA	NA	False	TATAAA	-5	NA	30117171	30184630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_40219.known	chr17	+	2420	6	FSM	ENSG00000126653.18	ENST00000612959.4	2420	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	155.444652529445	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	-13	True	NA	18	True	AATAAA	-21	NA	30116806	30186474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_4022.nic	chr1	+	1937	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	16.5939748101532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGAGTCTTCATTTCA	-25	True	NA	11	True	AATAAA	-22	NA	59296783	59762727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_40225.nic	chr17	+	414	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-31	7331	4	0	5prime_fragment	FALSE	canonical	3	233	junction_1	88.3544000036218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	-5	True	NA	NA	False	AAAAAG	-8	NA	30116784	30179144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_40231.known	chr17	+	582	4	FSM	ENSG00000126653.18	ENST00000585881.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	206.856364551724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	172	False	NA	NA	False	AAAAAG	-8	NA	30116991	30179144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30117333_30172541_30172599_30178070_30178200_30179089
transcript_40232.known	chr17	+	482	3	FSM	ENSG00000126653.18	ENST00000584423.5	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAGTTATATATATAT	NA	False	NA	NA	False	NA	NA	NA	30116780	30128163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30116864_30118079_30118174_30127858
transcript_40233.known	chr17	-	2307	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_8	37.309737722552	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	23	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
transcript_40234.nic	chr17	-	1823	10	NIC	ENSG00000108578.15	novel	2307	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	132.879040883703	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	23	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286852_30291491_30291509_30291806
transcript_40237.known	chr17	+	5987	9	FSM	ENSG00000108587.16	ENST00000451249.7	5987	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	70.7582813174543	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	-9	True	NA	NA	False	NA	NA	NA	30477407	30527592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_40238.known	chr17	+	6039	9	FSM	ENSG00000108587.16	ENST00000225724.9	6039	9	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_2	85.8297733889587	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	30477361	30527592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_40239.known	chr17	+	1011	9	FSM	ENSG00000108587.16	ENST00000467337.6	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	155.582725181814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	6	True	NA	NA	False	ATTAAA	-14	NA	30477422	30522609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477487_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_40240.known	chr17	+	947	9	FSM	ENSG00000108587.16	ENST00000414833.2	947	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	160.16163710452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTTTCTAACACATT	25	False	NA	NA	False	NA	NA	NA	30477441	30522558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30477487_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_40241.nnic	chr17	+	1518	9	NNC	ENSG00000108587.16	novel	1011	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	155.877355635769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	6	True	NA	NA	False	ATTAAA	-14	NA	30477422	30522609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_30477994_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_40243.known	chr17	+	1273	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	28.6569751059358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	168	False	NA	NA	False	AATAAA	-22	NA	30600891	30634326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
transcript_40245.known	chr17	+	1411	9	FSM	ENSG00000214719.13	ENST00000398849.6	1411	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.5628489837824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATTTTAAGAAGTTAAG	41	False	NA	NA	False	AATAAA	-19	NA	30576507	30634323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30576662_30599903_30599979_30607551_30607666_30608429_30608563_30610888_30610943_30615895_30615981_30631754_30631928_30633097_30633391_30633993
transcript_40246.known	chr17	-	1352	3	FSM	ENSG00000231421.8	ENST00000436477.7	1352	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCGTGTGATCTGGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	30577000	30573470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30573778_30573935_30573986_30576005
transcript_40249.known	chr17	-	2873	8	FSM	ENSG00000176390.12	ENST00000324238.7	2873	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.6418390534633	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTACTTTTTTCTTC	16	True	NA	-8	True	AATAAA	-17	NA	30824692	30782683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_40258.nic	chr17	-	1049	5	ISM	ENSG00000176390.12	ENST00000324238.7	2873	8	-37	10621	-37	-8198	5prime_fragment	FALSE	canonical	3	157	junction_4	17.8937838368524	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACCTCATGTGATTTTT	-21	True	NA	-10	True	NA	NA	NA	30824729	30793304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_40259.known	chr17	-	1392	7	FSM	ENSG00000176390.12	ENST00000578692.1	1392	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.6178371974522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATAGAAGATATAGG	37	True	NA	NA	False	AATAAA	-16	NA	30824671	30783935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30824522
transcript_4026.known	chr1	+	1873	16	FSM	ENSG00000172456.18	ENST00000303721.12	1873	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.8096131631513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTTCATTTCAAAA	14	True	NA	14	True	AATAAA	-25	NA	59297093	59762730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_40261.nic	chr17	+	3590	7	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-24	20559	-20	-13972	5prime_fragment	FALSE	canonical	3	54	junction_3	7.31247032282677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCCTTTCTTCTGTAC	-41	True	NA	NA	False	AAAAAG	-15	NA	30831945	30855880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_30832414_30834147_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30844834_30844917_30855142
transcript_40262.nic	chr17	+	2403	3	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-24	39200	-20	-32613	5prime_fragment	FALSE	canonical	3	69	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTAAGAAAAAATCTAACAA	-41	True	NA	NA	False	AATGAA	-29	NA	30831945	30837239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_30832414_30834147_30836049_30837205
transcript_40263.nic	chr17	+	1838	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-24	40922	-20	-34335	5prime_fragment	FALSE	canonical	3	72	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAATAAGAAAACAT	-41	True	NA	NA	False	AATAAA	-9	NA	30831945	30835517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_30832414_30834147
transcript_40264.nic	chr17	+	1907	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-24	40853	-20	-34266	5prime_fragment	FALSE	canonical	3	72	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAACAACCTTTTTCT	-41	True	NA	NA	False	AAAACA	-20	NA	30831945	30835586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_30832414_30834147
transcript_40265.known	chr17	+	6873	23	FSM	ENSG00000176208.9	ENST00000321990.5	6873	23	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	17.7056394807273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGATGTAATCATCT	-21	True	NA	28	True	ATTAAA	-37	NA	30831965	30895869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_30832414_30834147_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30844834_30844917_30855142_30855328_30856954_30857113_30858160_30858324_30860432_30860613_30865703_30865801_30868332_30868413_30869247_30869391_30869495_30869647_30876373_30876551_30877415_30877550_30878002_30878097_30879422_30879488_30887191_30887373_30892606_30892789_30893293_30894151_30894563_30894723_30894834
transcript_40266.known	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	8.80656320908194	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-10	True	NA	-5	True	AATAAA	-13	NA	30906238	30898985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
transcript_40267.nnic	chr17	-	1298	4	NNC	ENSG00000172171.11	novel	1306	4	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	55.874860178796	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-25	True	NA	-5	True	AATAAA	-13	NA	30906253	30898985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_30899607_30900412_30900563_30904065_30904530_30906190
transcript_40269.known	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-7	True	NA	-5	True	AATAAA	-13	NA	30906235	30898985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30900563_30904065_30904530_30906167
transcript_40272.known	chr17	-	559	2	FSM	ENSG00000172171.11	ENST00000541382.2	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATTTGAGAACCTACT	-7	True	NA	NA	False	NA	NA	NA	30906235	30904038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_30904530_30906167
transcript_40279.known	chr17	-	868	4	FSM	ENSG00000172301.11	ENST00000302362.11	868	4	0	0	0	0	multi-exon	FALSE	canonical	2	450	junction_2	86.8498064988569	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGCTTCGTCTGCTT	-13	True	NA	-13	True	AATAAA	-16	NA	31859244	31851870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31859100
transcript_4028.nic	chr1	+	1725	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.7546559363723	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGAGTCTTCATTTCA	-28	True	NA	11	True	AATAAA	-22	NA	59296780	59762727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_40281.nic	chr17	-	2179	20	NIC	ENSG00000108651.10	novel	4330	19	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	146.671226740157	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGTCTTGCTCTGTTG	NA	False	NA	-7	True	ATTAAA	-17	NA	31901765	31863172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_31863517_31865365_31865439_31866654_31866716_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_40286.known	chr17	-	4330	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	30.1205397292321	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTACTTTAGAACA	-3	True	NA	-29	True	ATTAAA	-13	NA	31901708	31860903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_40302.known	chr17	+	4495	16	FSM	ENSG00000178691.11	ENST00000322652.10	4495	16	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_4	36.8573225047917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGTTTTGGGGTTTTT	-3	True	NA	21	True	TATAAA	-6	NA	31937006	32001038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_40304.known	chr17	+	3977	15	FSM	ENSG00000178691.11	ENST00000580398.1	3977	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	76.4131159272692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTTAGGGGAGATGT	15	True	NA	NA	False	NA	NA	NA	31937066	32000649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_40307.known	chr17	+	393	2	FSM	ENSG00000185158.12	ENST00000581370.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCCGAAGCTTTGT	648	False	NA	13	True	AATAAA	-14	NA	32008035	32017220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32008133_32016924
transcript_40308.known	chr17	+	431	3	FSM	ENSG00000264164.1	ENST00000358484.4	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACACATGGACATAACTG	NA	False	NA	NA	False	AAGAAA	-17	NA	32083178	32096989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32083323_32095061_32095202_32096842
transcript_40311.nic	chr17	+	735	2	ISM	ENSG00000264164.1	ENST00000358484.4	431	3	-94	1431	-94	-1431	5prime_fragment	FALSE	canonical	3	111	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAAATAAAATAATC	NA	False	NA	NA	False	CATAAA	-12	NA	32083084	32095558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_32083323_32095061
transcript_40312.nnic	chr17	+	1800	3	NNC	ENSG00000264164.1	novel	431	3	NA	NA	-117	15361	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	53.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACTCCTCCTTTAGAAA	NA	False	NA	100	True	ATTAAA	-36	NA	32083061	32112426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_32083323_32095061_32095202_32111027
transcript_40314.known	chr17	+	860	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTCATTTATTTAT	3	True	NA	NA	False	ATTAAA	-16	NA	32127594	32128454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32127600_32128500
transcript_40316.known	chr17	+	2960	20	FSM	ENSG00000126858.19	ENST00000394692.6	2960	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_19	83.5223857397979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	102	False	NA	10	True	AATAAA	-20	NA	32142679	32225727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
transcript_40317.known	chr17	+	3165	20	FSM	ENSG00000126858.19	ENST00000545287.7	3165	20	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	93.1850688882715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	4	True	NA	10	True	AATAAA	-20	NA	32142501	32225727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
transcript_40318.known	chr17	+	2919	19	FSM	ENSG00000126858.19	ENST00000354266.7	2919	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	84.4801094275386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTCCATCATCAG	13	False	NA	24	True	AATAAA	-29	NA	32142559	32225666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32142730_32171046_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
transcript_40322.known	chr17	+	13740	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_8	262.148560493082	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	-5	True	NA	14	True	AATAAA	-20	NA	32350156	32381885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_4033.nic	chr1	+	1721	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	23.7636289141957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGAGTCTTCATTTCA	-25	True	NA	11	True	AATAAA	-22	NA	59296783	59762727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59757930_59757993_59762502
transcript_40332.known	chr17	+	2124	11	FSM	ENSG00000010244.19	ENST00000394673.6	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_8	169.709192444016	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTTTTTATTCATAAC	NA	False	NA	28	True	AATAAA	-15	NA	32350137	32370343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32367771_32368015_32369294_32369455_32369598
transcript_40335.known	chr17	+	2283	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	398.5993602604	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	NA	False	NA	21	True	AATAAA	-22	NA	32350131	32370451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_40354.nic	chr17	-	1369	10	NIC	ENSG00000108666.10	novel	4547	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	201.113566590289	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGAGTCCTAGATA	8677	False	NA	-28	True	AATAAA	-14	NA	32341951	32331595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341800
transcript_40356.known	chr17	-	4547	10	FSM	ENSG00000108666.10	ENST00000577809.6	4547	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	157.527971257155	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTGTTTTTGTTTAAT	-21	True	NA	-1	True	AATAAA	-18	NA	32342173	32328440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
transcript_40380.known	chr17	+	3850	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_5	139.509919903494	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	20	True	NA	NA	False	AATAAA	-19	NA	32444509	32483319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
transcript_40384.known	chr17	+	2159	13	FSM	ENSG00000108671.11	ENST00000457654.6	2159	13	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_5	142.40571929838	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGCCCCCAAGGGGCCT	-16	True	NA	NA	False	NA	NA	NA	32444473	32481471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488
transcript_40389.known	chr17	+	896	9	FSM	ENSG00000006042.12	ENST00000439138.5	896	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	343.725544584629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGCAATTTAGTGCCT	31	True	NA	NA	False	GATAAA	-34	NA	32928209	32940978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32928238_32930899_32930972_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_40390.known	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_1	89.5975127205788	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	-26	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_40395.nic	chr17	+	1609	7	NIC	ENSG00000006042.12	novel	4218	8	NA	NA	-21	0	intron_retention	FALSE	canonical	3	580	junction_1	96.5500733643774	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	0	True	NA	-4	True	NA	NA	NA	32928131	32941613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_32928238_32931326_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_40397.known	chr17	+	1683	7	FSM	ENSG00000006042.12	ENST00000394642.7	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	254.11398361103	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	24	False	NA	-4	True	NA	NA	NA	32927909	32941613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_32928238_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_40398.nnic	chr17	+	1255	6	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	308.830309393362	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	-26	True	NA	-4	True	NA	NA	NA	32928152	32941613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_32928238_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_40399.nnic	chr17	+	1123	5	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	348.219399229853	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	-26	True	NA	-4	True	NA	NA	NA	32928152	32941613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_32928238_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_404.nnic	chr1	-	824	3	NIC	ENSG00000178821.13	novel	935	5	NA	NA	141	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	30.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	157	False	NA	-9	True	AATAAA	-17	NA	1919117	1917590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_1918163_1918252_1918432_1919044
transcript_40402.nnic	chr17	-	2102	2	Fusion	ENSG00000108684.15_ENSG00000279668.3	novel	913	2	NA	NA	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTAGTAAGTTGTTGTT	NA	False	NA	NA	False	AGTAAA	-25	NA	34157296	33827698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr17_-_33828482_34155977
transcript_40404.nnic	chr17	+	1420	4	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	2257	-1503	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	13.5973853695808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAATGGGAATAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34157870	34164233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_34158121_34159042_34159116_34161424_34161900_34163611
transcript_40405.known	chr17	+	1937	3	FSM	ENSG00000263571.3	ENST00000667899.1	1937	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	34155613	34162199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34156703_34159042_34159116_34161424
transcript_40406.nnic	chr17	+	1291	3	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	2064	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	12	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	34157677	34162199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_34158121_34159042_34159116_34161424
transcript_40407.nnic	chr17	+	1072	4	NNC	ENSG00000108691.9	novel	741	3	NA	NA	-3828	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	241.287288425138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	-1	True	NA	22	True	AATAAA	-18	NA	34251389	34257203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_34251591_34255154_34255426_34256221_34256340_34256721
transcript_40410.known	chr17	+	741	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_2	17	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	1	True	NA	22	True	AATAAA	-18	NA	34255284	34257203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34255426_34256221_34256340_34256721
transcript_40411.known	chr17	+	3055	20	FSM	ENSG00000005156.12	ENST00000262327.9	3055	20	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_19	78.7123871394883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAAGCAGGTCCAGCAA	14	True	NA	NA	False	NA	NA	NA	34980545	35003172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35002994
transcript_40412.known	chr17	+	8382	20	FSM	ENSG00000005156.12	ENST00000378526.9	8382	20	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	29.29768882757	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAGGAGGGAAACTGA	-20	True	NA	NA	False	NA	NA	NA	34980511	35009743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_40415.nic	chr17	+	3468	20	NIC	ENSG00000005156.12	novel	8382	20	NA	NA	5	260	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	80.0727162596391	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGTTCTCCTATTA	-15	True	NA	22	True	AAGAAA	-24	NA	34980516	35005064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_34980623_34983231_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_40416.known	chr17	-	1847	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	3.96881333523521	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAATATTTAAATATTT	-3	True	NA	60	True	AATAAA	-16	NA	34961460	34927860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
transcript_40419.known	chr17	-	7210	7	FSM	ENSG00000092871.17	ENST00000394597.7	7210	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	35.7382459309662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	-12	True	NA	NA	False	ATTAAA	-20	NA	35063707	35005989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35063575
transcript_40420.known	chr17	-	7293	7	FSM	ENSG00000092871.17	ENST00000315249.11	7293	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	19.8781007364609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	576	False	NA	NA	False	ATTAAA	-20	NA	35089319	35005989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35089104
transcript_40429.known	chr17	-	9966	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	19.9078122267195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCTATAAATATGTCA	-17	True	NA	NA	False	AATAAA	-17	NA	35119860	35092220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
transcript_40431.known	chr17	-	1528	10	FSM	ENSG00000185379.21	ENST00000590016.5	1528	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	27.9567567309511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGAGCATCTCTGATG	30	True	NA	NA	False	NA	NA	NA	35119813	35100671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35116858_35117038_35119110_35119173_35119531
transcript_40437.known	chr17	-	1571	9	FSM	ENSG00000185379.21	ENST00000586044.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	16.0058583025091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	3	True	NA	-12	True	TATAAA	-15	NA	35119746	35100382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
transcript_40439.known	chr17	-	1409	8	FSM	ENSG00000185379.21	ENST00000588594.5	1409	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	25.4822867650356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	1791	False	NA	-12	True	TATAAA	-15	NA	35119719	35100382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35107365_35107448_35119110_35119173_35119531
transcript_4044.known	chr1	+	5713	22	FSM	ENSG00000134709.13	ENST00000371208.5	5713	22	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_19	19.8124997764616	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAGTTGTGAAATGAT	-17	True	NA	-45	True	AATAAA	-18	NA	59814948	59876322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314_59848517_59849072_59849184_59858427_59858516_59858984_59859046_59860187_59860329_59862783_59862878_59864631_59864667_59865162_59865246_59865871_59865973_59868249_59868352_59871041_59871111_59872794
transcript_40441.known	chr17	-	1353	7	FSM	ENSG00000185379.21	ENST00000335858.11	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	20.5946325261921	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	4	True	NA	-12	True	TATAAA	-15	NA	35119745	35100382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35119110_35119173_35119531
transcript_40444.nic	chr17	-	2001	14	NIC	ENSG00000073536.18	novel	5193	13	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	70.6705834201667	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTGTGTTGGGTTC	8982	False	NA	-23	True	NA	NA	NA	35142335	35132070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_35132450_35133170_35133242_35133338_35133499_35134942_35135060_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_40446.known	chr17	-	5193	13	FSM	ENSG00000073536.18	ENST00000442241.9	5193	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_12	27.1890245421853	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCCCAACCGGATCC	-9	True	NA	11	True	AATAAA	-39	NA	35142303	35128729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_40451.known	chr17	+	5668	20	FSM	ENSG00000141161.12	ENST00000394570.7	5668	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.976170367946916	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAACTTGTGGCAAAACA	1	True	NA	NA	False	AATAAA	-20	NA	35147816	35189343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35147911_35148263_35148432_35148972_35149010_35150047_35150224_35152892_35152983_35154573_35154742_35155295_35155465_35159374_35159546_35163994_35164167_35168060_35168362_35169836_35169932_35170113_35170256_35171321_35171463_35174241_35174370_35175967_35176035_35177016_35177131_35177494_35177611_35180558_35180677_35183426_35183583_35186298
transcript_40452.known	chr17	+	10555	5	FSM	ENSG00000166750.10	ENST00000299977.9	10555	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.67423461417477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTCTTCTTTCTTCT	-1	True	NA	NA	False	AATAAA	-24	NA	35243071	35273655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35243144_35258650_35259703_35260970_35261097_35264182_35264904_35265071
transcript_40454.nic	chr17	+	3050	4	ISM	ENSG00000166750.10	ENST00000299977.9	10555	5	-48	7721	-47	-426	intron_retention	FALSE	canonical	3	13	junction_2	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTGTGAAACCATTTAA	571	False	NA	NA	False	AAGAAA	-25	NA	35243023	35265934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_35243144_35258650_35259703_35260970_35261097_35264182
transcript_40455.known	chr17	+	718	5	FSM	ENSG00000267364.3	ENST00000591886.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.04152298679729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	0	True	NA	NA	False	ATTAAA	-21	NA	35313625	35324909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35316355_35316410_35321734_35321866_35323147_35323344_35324653
transcript_40456.known	chr17	+	1088	4	FSM	ENSG00000267364.3	ENST00000664542.1	1088	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.68331255192114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTACTCCATTTTCCAT	-13	True	NA	NA	False	GATAAA	-12	NA	35313505	35325296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35321734_35321866_35323147_35323261_35324653
transcript_40458.known	chr17	+	1343	4	FSM	ENSG00000267364.3	ENST00000664469.1	1343	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	-4	True	NA	20	True	AATATA	-31	NA	35313485	35325448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35321734_35321866_35323147_35323344_35324653
transcript_4046.nic	chr1	+	1287	11	ISM	ENSG00000134709.13	ENST00000686716.1	3756	15	-110	13990	-27	13109	5prime_fragment	FALSE	canonical	3	167	junction_4	15.7098695093244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAATTAAAAAAAGCAAA	-4	True	NA	7	True	AATACA	-13	NA	59814904	59848459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314
transcript_40460.known	chr17	+	1116	3	FSM	ENSG00000267364.3	ENST00000659130.2	1167	3	51	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTTATTTCCAGGTT	-11	True	NA	21	True	AATATA	-32	NA	35313507	35325449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35323147_35323269_35324653
transcript_40461.known	chr17	+	1219	3	FSM	ENSG00000267364.3	ENST00000662865.1	1219	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	-11	True	NA	20	True	AATATA	-31	NA	35313478	35325448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35323147_35323344_35324653
transcript_40462.known	chr17	+	526	3	FSM	ENSG00000267364.3	ENST00000663051.2	540	3	14	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	6	True	NA	NA	False	ATTAAA	-21	NA	35313495	35324909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313645_35323147_35323269_35324653
transcript_40463.known	chr17	+	764	4	FSM	ENSG00000267364.3	ENST00000585387.2	764	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	5	True	NA	NA	False	ATTAAA	-21	NA	35313523	35324909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35313707_35321736_35321866_35323147_35323344_35324653
transcript_40464.known	chr17	-	2506	4	FSM	ENSG00000172123.13	ENST00000304905.10	2506	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	5.09901951359278	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAAAACAAAACTCCA	4	True	NA	NA	False	AATGAA	-19	NA	35432500	35410921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432187
transcript_40465.known	chr17	-	6004	7	FSM	ENSG00000154760.14	ENST00000526861.5	6004	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	37.5218454888467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTTCACGAATTAA	-7	True	NA	NA	False	NA	NA	NA	35448782	35437542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35446716_35446754_35447267_35447415_35448721
transcript_40467.known	chr17	-	8398	6	FSM	ENSG00000154760.14	ENST00000285013.11	8398	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	23.2155120555201	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTTTTTACTCTGC	9	True	NA	0	True	AATAAA	-19	NA	35448766	35435095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
transcript_4047.known	chr1	-	1879	9	FSM	ENSG00000134716.11	ENST00000371204.4	1879	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.97647022494766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTCCTTCCTGCTTC	-21	True	NA	1	True	CATAAA	-26	NA	59926773	59893307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_59893830_59900964_59901104_59904870_59905059_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_40471.known	chr17	+	5700	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	0	0	0	0	multi-exon	TRUE	canonical	2	100	junction_14	63.8072494264177	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	10	True	NA	NA	False	AATAAA	-18	NA	35587321	35726413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_40474.nic	chr17	+	3451	22	NIC	ENSG00000006125.18	novel	3483	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_1	76.4986624162405	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACTTTACTGTTTTA	-5	True	NA	17	True	ATTAAA	-23	NA	35587415	35724089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_40475.known	chr17	+	5702	21	FSM	ENSG00000006125.18	ENST00000621914.4	5702	21	0	0	0	0	multi-exon	FALSE	canonical	2	181	junction_14	40.1239018541318	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGTTTGTGGTATG	-38	True	NA	NA	False	AATAAA	-14	NA	35587273	35726409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_40479.nic	chr17	+	2515	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_14	73.5477076877482	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	-29	True	NA	19	True	AATAAA	-24	NA	35587282	35660120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_4048.known	chr1	-	1667	8	FSM	ENSG00000134716.11	ENST00000466095.5	1667	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.34248118673448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCTATAGTGTGCCT	-9	True	NA	-11	True	CATAAA	-14	NA	59926761	59893319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_59893830_59900964_59901104_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_40480.nic	chr17	+	2471	15	NIC	ENSG00000006125.18	novel	2285	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_14	90.0899776980362	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	16	True	NA	19	True	AATAAA	-24	NA	35587495	35660120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_40484.nic	chr17	+	246	3	ISM	ENSG00000006125.18	ENST00000590538.5	568	6	-39	9896	9	-2716	5prime_fragment	FALSE	canonical	3	234	junction_1	28	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAGAAAGGAGG	-29	True	NA	NA	False	ACTAAA	-22	NA	35587282	35598269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_35587429_35594007_35594068_35598229
transcript_40485.known	chr17	+	2285	15	FSM	ENSG00000006125.18	ENST00000614600.4	2285	15	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_1	81.4798397501755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCATCTGTTTTTT	55	False	NA	NA	False	NA	NA	NA	35587366	35670898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856
transcript_40488.known	chr17	-	1604	3	FSM	ENSG00000108733.11	ENST00000586663.2	1604	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAAGGGAATCATGT	-4	True	NA	NA	False	ATTAAA	-15	NA	35578552	35575788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35576182_35577037_35577592_35577895
transcript_40489.known	chr17	+	1298	2	FSM	ENSG00000267321.4	ENST00000592381.1	1298	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGTCTGAATGAAAAATT	11	True	NA	NA	False	TATAAA	-20	NA	35568119	35574792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35568502_35573876
transcript_40507.nnic	chr17	+	2094	16	NNC	ENSG00000270647.7	novel	2324	18	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	16.2426051550305	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	NA	False	NA	38	True	AATAAA	-20	NA	35809444	35847234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820249_35820331_35820438_35822639_35822834_35824077_35824100_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_40511.known	chr17	+	2140	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	15.9114214743163	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	6	True	NA	38	True	AATAAA	-20	NA	35809488	35847234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_40523.known	chr17	+	760	7	FSM	ENSG00000270647.7	ENST00000605197.3	2388	7	0	1628	0	627	multi-exon	FALSE	canonical	3	20	junction_1	4.78423336480244	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGTTAAGAGACTTTA	23	False	NA	NA	False	NA	NA	NA	35809505	35824289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820249_35820331_35820438_35822639_35822834_35824077
transcript_40526.known	chr17	+	2103	1	FSM	ENSG00000270647.7	ENST00000604434.1	2103	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGCCATTAATAATTTT	-1	True	NA	NA	False	ATTAAA	-15	NA	35809481	35811584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_35809500_35811600
transcript_40527.known	chr17	-	1163	7	FSM	ENSG00000278023.7	ENST00000620284.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	22.6764684689266	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	1	True	NA	-19	True	AATAAA	-16	NA	35930773	35918079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_40528.known	chr17	-	1032	6	FSM	ENSG00000278023.7	ENST00000616596.4	1032	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	33.3142612104786	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGAGGCGGGGCCGCGG	47	False	NA	-5	True	AATAAA	-30	NA	35930727	35918065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_40529.nnic	chr17	-	995	6	NNC	ENSG00000278023.7	novel	779	5	NA	NA	-4	1084	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	31.7389350798038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTCAGAAGCTTTGT	-3	True	NA	NA	False	AATAAA	-14	NA	35930777	35921070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_35921349_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_4053.nic	chr1	-	1013	7	NIC	ENSG00000162604.12	novel	921	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	93.0049281848369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-9	True	NA	-6	True	AATAAA	-18	NA	61725144	61681045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
transcript_40531.known	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.9032558571174	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	10	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_40532.known	chr17	-	1535	6	FSM	ENSG00000278023.7	ENST00000619262.4	1535	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	23.2843294943187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	5	True	NA	-19	True	AATAAA	-16	NA	35930769	35918079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075
transcript_40534.known	chr17	-	3931	26	FSM	ENSG00000278259.5	ENST00000614623.5	3931	26	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_14	31.3591836628443	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATGTCAAGTTTT	-10	True	NA	-2	True	AGTAAA	-15	NA	36534868	36495635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_40542.known	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	12.879829191414	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-10	True	NA	-26	True	ATTAAA	-21	NA	36534868	36513085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_40543.known	chr17	-	4299	19	FSM	ENSG00000278259.5	ENST00000621550.4	4299	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.9209152201425	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCATCTGAATGTCAAG	-17	True	NA	-6	True	AGTAAA	-11	NA	36535457	36495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_36496407_36498265_36498555_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36512657_36512780_36512873_36513506_36513628_36513726_36514445_36514549_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_40545.known	chr17	+	905	5	FSM	ENSG00000273611.5	ENST00000617429.5	905	5	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	29.521178838251	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	-4	True	NA	81	True	AATAAA	-21	NA	36486680	36495822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36495222
transcript_40547.known	chr17	+	834	5	FSM	ENSG00000273611.5	ENST00000620324.4	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	313.088246345978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGTTAGGGATGGATC	10	True	NA	36	True	NA	NA	NA	36486694	36498148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36497605
transcript_4055.known	chr1	-	1250	7	FSM	ENSG00000162604.12	ENST00000294613.9	1250	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	100.03943666819	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAGTGCTTTGTTATT	39	False	NA	-7	True	AATAAA	-17	NA	61725423	61681046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723785_61724954
transcript_40551.known	chr17	+	926	4	FSM	ENSG00000273611.5	ENST00000619730.4	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	306.805403400194	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCTTTTTAAAGGA	NA	False	NA	82	True	AATAAA	-22	NA	36486628	36495823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36495222
transcript_40555.known	chr17	+	876	2	FSM	ENSG00000277161.2	ENST00000619326.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCACTGAAGAGGTTAA	11	True	NA	NA	False	NA	NA	NA	36535019	36537934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36535055_36537093
transcript_40556.known	chr17	+	2816	2	FSM	ENSG00000277161.2	ENST00000614443.2	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGATTGTCAATACTTG	-22	True	NA	32	True	AATAAA	-39	NA	36534986	36539303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36535593_36537093
transcript_40557.known	chr17	+	2264	2	FSM	ENSG00000277161.2	ENST00000620233.1	2264	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATACTTGTTTATTG	27	True	NA	39	True	TATAAA	-40	NA	36535554	36539310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36535602_36537093
transcript_4056.nnic	chr1	-	951	6	NIC	ENSG00000162604.12	novel	969	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	94.7409098541913	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-7	True	NA	-6	True	AATAAA	-18	NA	61725142	61681045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724901
transcript_40563.known	chr17	+	2281	6	FSM	ENSG00000278311.5	ENST00000619573.1	2281	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	65.7248811334034	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	36576656	36586153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_40564.known	chr17	+	1515	7	FSM	ENSG00000278535.5	ENST00000618403.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	51.4805788623244	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	-7	True	NA	16	True	ATTAAA	-20	NA	36591878	36600804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
transcript_40565.known	chr17	+	638	3	FSM	ENSG00000278535.5	ENST00000612205.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	187.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCTGAGTCTATTAG	29	True	NA	12	True	ATTAAA	-25	NA	36591914	36597013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36592157_36594970_36595181_36596827
transcript_40569.known	chr17	+	1839	5	FSM	ENSG00000278619.5	ENST00000614766.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_1	8.61321658847611	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	-34	True	NA	13	True	AATAAA	-14	NA	36601582	36608964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36602353_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_4057.nnic	chr1	-	933	6	NIC	ENSG00000162604.12	novel	969	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	106.691330481909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-7	True	NA	-6	True	AATAAA	-18	NA	61725142	61681045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724919
transcript_40571.known	chr17	+	1284	5	FSM	ENSG00000278619.5	ENST00000612760.1	1284	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	24.3823706804732	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	345	False	NA	13	True	AATAAA	-14	NA	36601961	36608964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36602177_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_40573.nnic	chr17	+	1231	3	NNC	ENSG00000278619.5	novel	1839	5	NA	NA	-15	-5684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGTAGTTTTAGCTTTT	1566	False	NA	NA	False	AATAAA	-17	NA	36601567	36603280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_36602353_36602552_36602647_36602928
transcript_40574.known	chr17	+	2062	12	FSM	ENSG00000275700.6	ENST00000619387.5	2062	12	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	56.0759520355581	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCTTGTGATTTCTTA	-26	True	NA	18	True	AATAAA	-18	NA	36948953	37056871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_40575.known	chr17	+	2018	11	FSM	ENSG00000275700.6	ENST00000680340.1	2018	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_10	225.077431120937	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCTTGTGATTTCTT	6718	False	NA	17	True	AATAAA	-17	NA	36948924	37056870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37056600
transcript_40576.known	chr17	+	2712	11	FSM	ENSG00000275700.6	ENST00000679881.1	2712	11	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_1	58.634119759744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGCCACCACCGCTT	310	False	NA	7	True	AATAAA	-7	NA	36949289	37056860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_40578.nnic	chr17	-	679	4	NNC	ENSG00000278540.5	novel	451	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	63.0467198900061	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	9609	False	NA	1	True	AATAAA	-24	NA	37359141	37328644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_37328987_37330172_37330336_37339819_37339851_37358998
transcript_40579.nic	chr17	-	785	4	NIC	ENSG00000278540.5	novel	451	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	59.4866931898779	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	9609	False	NA	1	True	AATAAA	-24	NA	37359141	37328644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_37328987_37330172_37330426_37339803_37339851_37358998
transcript_40580.nnic	chr17	+	1916	17	NNC	ENSG00000276234.5	novel	2211	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.0733710789639	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	-18	True	NA	24	True	ATTAAA	-17	NA	37406885	37478267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477192_37478053
transcript_40582.known	chr17	+	4236	16	FSM	ENSG00000276234.5	ENST00000615182.5	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.22030007562579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACTCTTCTCTGTG	-18	True	NA	5	True	AATAAA	-18	NA	37406885	37479725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_40588.known	chr17	+	2211	17	FSM	ENSG00000276234.5	ENST00000620628.4	2211	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	17.0733710789639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	-14	True	NA	24	True	ATTAAA	-17	NA	37406889	37478267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477491_37478053
transcript_40589.known	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	20.5	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	-1	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_37489959_37510676_37510765_37512180
transcript_4059.nnic	chr1	-	3017	5	NIC	ENSG00000162604.12	novel	969	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	35	junction_4	102.698588111035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-7	True	NA	-6	True	AATAAA	-18	NA	61725142	61681045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724901
transcript_40591.known	chr17	-	8141	22	FSM	ENSG00000275066.5	ENST00000612223.5	8141	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_16	15.8532098654673	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGCTACTAAGCCTTT	-19	True	NA	-19	True	AATACA	-13	NA	37609418	37514806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_40593.known	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_12	53.7297185276568	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-7	True	NA	-2	True	AATAAA	-35	NA	37643446	37609738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_40595.nnic	chr17	-	2417	15	NNC	ENSG00000278053.5	novel	6383	15	NA	NA	-36	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	117.775924396062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTTCCACTGCTCACT	45	False	NA	NA	False	AATAAA	-15	NA	37643482	37613751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_37614354_37618280_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_406.known	chr1	+	2385	18	FSM	ENSG00000067606.17	ENST00000378567.8	2385	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	14.4756088851266	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCTGATGCCTTTTTT	-11	True	NA	34	True	AATAAA	-20	NA	2050410	2185395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2050702_2055440_2055563_2056483_2056574_2059540_2059592_2135261_2135348_2144209_2144342_2146026_2146109_2148871_2148925_2150789_2150979_2155994_2156093_2169517_2169605_2172054_2172191_2172300_2172389_2173896_2174017_2174753_2174834_2175223_2175314_2184582_2184699_2184921
transcript_40604.nic	chr17	-	1711	13	ISM	ENSG00000278053.5	ENST00000617633.5	6383	15	-36	10029	-36	0	5prime_fragment	FALSE	canonical	3	342	junction_10	51.631910352675	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATCTTGAATTTACCT	45	False	NA	-1	True	CATAAA	-22	NA	37643482	37619767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_40606.nic	chr17	-	330	2	ISM	ENSG00000278053.5	ENST00000613633.1	776	6	-49	15302	-36	-11319	5prime_fragment	FALSE	canonical	3	550	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACGATGACTTCAGGT	45	False	NA	61	True	AAGAAA	-5	NA	37643482	37642127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_37642309_37643333
transcript_40607.known	chr17	-	1971	9	FSM	ENSG00000275410.6	ENST00000621123.4	1971	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	9.25928587959136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATTGCCACAATGCCT	1	True	NA	NA	False	NA	NA	NA	37745059	37687171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733744_37739439_37739640_37744540
transcript_40608.known	chr17	-	2790	9	FSM	ENSG00000275410.6	ENST00000617811.5	2790	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	5.25446238924593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTCATATTTCTG	1	True	NA	-5	True	ATTAAA	-20	NA	37745059	37686430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733822_37739439_37739640_37744540
transcript_4061.known	chr1	-	1056	5	FSM	ENSG00000162604.12	ENST00000371178.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.810999045859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAAGGGC	342	False	NA	NA	False	NA	NA	NA	61725120	61694153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_61694771_61700933_61701026_61709328_61709438_61723712_61723787_61724956
transcript_40611.known	chr17	-	1546	7	FSM	ENSG00000275410.6	ENST00000613727.4	1546	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.6062665476262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTCCTGCTGGCACCTC	71	False	NA	NA	False	NA	NA	NA	37745018	37687241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_37687393_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733744_37739439_37739640_37744540
transcript_40614.known	chr17	-	1643	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	0	2	0	multi-exon	FALSE	canonical	1	2	junction_9	145.769488582669	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAATCTGAAACTTTT	153	False	NA	NA	False	NA	NA	NA	38257192	38195702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
transcript_4062.known	chr1	-	427	1	FSM	ENSG00000271200.1	ENST00000605725.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAGTCATTATTTTCT	NA	False	NA	0	True	AATAAA	-20	NA	61742424	61741997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_61742000_61742400
transcript_40623.known	chr17	+	1553	8	FSM	ENSG00000278845.5	ENST00000613675.5	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	34.6221587650311	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGCCTTTGATTGTG	-6	True	NA	12	True	TATAAA	-18	NA	38297167	38323211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38320617_38320768_38322125_38322300_38322508
transcript_40626.known	chr17	+	1554	7	FSM	ENSG00000278845.5	ENST00000619548.1	1554	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	264.364437009889	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGATTGTGTTCTTA	NA	False	NA	18	True	TATAAA	-24	NA	38297022	38323217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38322125_38322300_38322508
transcript_4063.nic	chr1	+	3721	26	ISM	ENSG00000132849.22	ENST00000635214.1	4863	36	-52	199601	-52	39118	5prime_fragment	FALSE	canonical	3	59	junction_5	7.05362318245028	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAGAAAAGGTAAC	-40	True	NA	NA	False	NA	NA	NA	61742424	61914649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586
transcript_40633.known	chr17	-	702	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	0	32	0	multi-exon	FALSE	canonical	3	19	junction_3	10.077477638554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	0	True	NA	NA	False	AATAAA	-33	NA	38452399	38450393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
transcript_40636.nic	chr17	-	866	4	NIC	ENSG00000276170.5	novel	734	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	12.0830459735946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-9	True	NA	NA	False	AATAAA	-33	NA	38452431	38450393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38450724_38451305_38451526_38451625_38451828_38452317
transcript_40638.nic	chr17	-	901	3	ISM	ENSG00000276170.5	ENST00000617990.5	734	4	323	0	-162	0	3prime_fragment	FALSE	canonical	3	26	junction_2	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1495	False	NA	NA	False	AATAAA	-33	NA	38452108	38450393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_38450724_38451305_38451394_38451625
transcript_40639.nic	chr17	-	1022	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	-172	0	-151	0	multi-exon	FALSE	canonical	3	16	junction_2	13.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1506	False	NA	NA	False	AATAAA	-33	NA	38452097	38450393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451305_38451526_38451625
transcript_40642.nic	chr17	-	642	3	FSM	ENSG00000276170.5	ENST00000688817.1	654	3	8	4	0	-4	multi-exon	FALSE	canonical	3	19	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGAGGCTCAAAGAGA	-9	True	NA	NA	False	AATAAA	-29	NA	38452431	38450397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451625_38451828_38452317
transcript_40645.known	chr17	-	419	2	FSM	ENSG00000276170.5	ENST00000622796.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCCCGAGGAACATGG	1657	False	NA	-60	True	NA	NA	NA	38451946	38450625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38450724_38451625
transcript_40648.known	chr17	-	486	2	FSM	ENSG00000275532.2	ENST00000618407.2	494	2	0	8	0	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAAAATGTCAGTCCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	38706261	38703479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38703758_38706053
transcript_40656.nnic	chr17	-	1306	11	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	38.9780707577992	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	-12	True	NA	-6	True	AATAAA	-13	NA	38748341	38733899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38734254_38735491_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_40657.known	chr17	-	1534	11	FSM	ENSG00000277258.5	ENST00000616129.4	1534	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	41.3967390020035	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	1450	False	NA	-25	True	AATATA	-43	NA	38748378	38735043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
transcript_40661.known	chr17	-	1499	10	FSM	ENSG00000277258.5	ENST00000618941.4	1499	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.9858164339244	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGGGTTTTATAAATAAAT	1644	False	NA	-90	True	NA	NA	NA	38748184	38735108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
transcript_40662.nnic	chr17	-	1513	10	NIC	ENSG00000277258.5	novel	1534	11	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	33.8923495500783	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	3	True	NA	-25	True	AATATA	-43	NA	38748454	38735043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_40669.known	chr17	+	2552	4	FSM	ENSG00000277972.2	ENST00000613478.2	2552	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	15.121728296285	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGGGAGGAGAGA	-7	True	NA	NA	False	NA	NA	NA	38730340	38735605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38730407_38730759_38730796_38731319_38731440_38733275
transcript_40676.known	chr17	+	762	6	FSM	ENSG00000277791.5	ENST00000619426.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_5	206.633395171255	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	-25	True	NA	27	True	AATAAA	-16	NA	38752740	38764225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760430_38760609_38762410_38762506_38764118
transcript_40679.known	chr17	+	552	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	1121.77415284896	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	7	True	NA	27	True	AATAAA	-16	NA	38752772	38764225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
transcript_40680.known	chr17	+	426	3	FSM	ENSG00000277791.5	ENST00000614132.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_2	195.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	7619	False	NA	27	True	AATAAA	-16	NA	38760384	38764225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38760609_38762410_38762506_38764118
transcript_40686.known	chr17	-	3067	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	13.9044357430761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	5	True	NA	-8	True	AATAAA	-30	NA	38825321	38800440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_40691.nic	chr17	-	2231	10	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	-2	254	intron_retention	FALSE	canonical	3	37	junction_5	22.6312359252908	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTTGGTCAATGAC	3	True	NA	-1	True	AAAAAG	-17	NA	38825323	38801470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_40694.nic	chr17	-	2459	9	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	-19	254	intron_retention	FALSE	canonical	3	74	junction_4	14.2297004536287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTTGGTCAATGAC	NA	False	NA	-1	True	AAAAAG	-17	NA	38825374	38801470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_38802207_38802699_38802862_38806296_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_40696.nic	chr17	-	712	5	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-53	10132	-19	-219	5prime_fragment	FALSE	canonical	3	82	junction_1	9.85837207656518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAGAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	38825374	38810572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_40697.known	chr17	-	625	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	2722.71585002916	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTAAATGTTTTCCTT	8	True	NA	NA	False	ATTAAA	-17	NA	38853722	38847864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_40699.known	chr17	-	588	5	FSM	ENSG00000125691.14	ENST00000245857.9	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	3172.46137683345	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	338	False	NA	-25	True	AATAAA	-25	NA	38853428	38850080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853301
transcript_407.nic	chr1	+	1948	15	NIC	ENSG00000067606.17	novel	1859	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	50.0463560621754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTCCTCTGATGCCT	4530	False	NA	29	True	AATAAA	-15	NA	2116188	2185390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_2116311_2135261_2135348_2144209_2144342_2146026_2146109_2148871_2148925_2150789_2150979_2155994_2156093_2169517_2169605_2172054_2172191_2172300_2172389_2173896_2174017_2174753_2174834_2175223_2175314_2184582_2184699_2184921
transcript_4070.nic	chr1	+	1711	12	ISM	ENSG00000132849.22	ENST00000635214.1	4863	36	-52	312485	-52	-63846	5prime_fragment	FALSE	canonical	3	59	junction_5	6.37401750653022	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTAGGCACAAAGCATT	-40	True	NA	NA	False	AAGAAA	-45	NA	61742424	61801765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622
transcript_40701.known	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_4	898.178260424956	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	9	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_40703.known	chr17	-	3081	1	FSM	ENSG00000125691.14	ENST00000577760.1	3081	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	2	True	NA	NA	False	NA	NA	NA	38853764	38850683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_38850700_38853800
transcript_40704.known	chr17	+	3492	8	FSM	ENSG00000002834.18	ENST00000435347.7	3492	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	221.563921766544	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGACTTGGTTTCCT	82	False	NA	18	True	AATAAA	-13	NA	38870142	38921761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604_38919983_38920306
transcript_40705.known	chr17	+	3910	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_6	57.1792988958611	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	-3	True	NA	27	True	AATAAA	-22	NA	38870057	38921770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
transcript_40706.known	chr17	+	3692	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAGAATTATAAATTA	5791	False	NA	NA	False	AATAAA	-22	NA	38925167	38929384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_38925892_38926416
transcript_40709.known	chr17	+	2698	4	FSM	ENSG00000214553.11	ENST00000647826.2	2714	4	0	16	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	76.3675323681471	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCACTCTGCAAAGAAT	5848	False	NA	7	True	AATAAA	-31	NA	39033108	39053199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39033446_39034169_39034242_39044387_39046342_39052864
transcript_40710.known	chr17	-	1753	13	FSM	ENSG00000067191.16	ENST00000394310.7	1753	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	24.8845947436472	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	0	True	NA	NA	False	NA	NA	NA	39197702	39177135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_40712.known	chr17	+	1051	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_1	5401.4371050675	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTAATCTGCCTTC	-5	True	NA	58	True	AATAAA	-1	NA	39200341	39204711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_40713.known	chr17	+	792	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5873.55610852574	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	-2	True	NA	67	True	AATAAA	-10	NA	39200344	39204720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_40716.known	chr17	+	690	6	FSM	ENSG00000108298.12	ENST00000579374.5	690	6	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	5619.1926608722	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	1	True	NA	74	True	AATAAA	-17	NA	39200315	39204727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200350_39201221_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_40717.known	chr17	+	1247	5	FSM	ENSG00000108298.12	ENST00000577741.2	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	10069	junction_1	1954.85376690943	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	2	True	NA	74	True	AATAAA	-17	NA	39200316	39204727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39200350_39201212_39201320_39202316_39203110_39204076_39204188_39204524
transcript_40718.known	chr17	+	1330	5	FSM	ENSG00000108298.12	ENST00000678573.1	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	13054	junction_4	951.293067356217	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAGATCAGCCATTAAA	134	False	NA	33	True	AATAAA	-38	NA	39200506	39204686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_40720.known	chr17	-	8137	17	FSM	ENSG00000125686.12	ENST00000300651.11	8137	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	6.06958349065239	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-2	True	NA	0	True	AATAAA	-20	NA	39451263	39404284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_40722.known	chr17	-	4584	16	FSM	ENSG00000125686.12	ENST00000577831.5	4584	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	9.65401470891774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAGTAAAAGAC	-11	True	NA	NA	False	AATACA	-31	NA	39451272	39407713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_40723.known	chr17	+	8287	14	FSM	ENSG00000167258.15	ENST00000447079.6	8287	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	15.7829208867046	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTCCATTGCAT	-9	True	NA	6	True	ATTAAA	-18	NA	39461485	39534544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530603
transcript_40725.known	chr17	+	645	1	FSM	ENSG00000273576.1	ENST00000615852.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGCCTAAACTCCCTT	3989	False	NA	16	True	AATAAA	-16	NA	39566914	39567559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39566900_39567600
transcript_40726.known	chr17	+	1504	7	FSM	ENSG00000131771.14	ENST00000394267.2	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	24.3584345419268	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACTCCTCTTTCAGG	-8	True	NA	16	True	AATAAA	-16	NA	39628497	39636626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39628707_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_40728.known	chr17	+	1419	7	FSM	ENSG00000131771.14	ENST00000394265.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.4280029363954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGACTCCTCTTTCAG	-8	True	NA	15	True	AATAAA	-15	NA	39628497	39636625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39628623_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_4073.nic	chr1	+	2023	11	ISM	ENSG00000132849.22	ENST00000646453.1	5234	18	-269	46557	-269	0	5prime_fragment	FALSE	canonical	3	6	junction_1	24.5242736895509	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCCTAGATTTTTCTC	NA	False	NA	16	True	AATAAA	-25	NA	61951783	62117393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
transcript_40731.known	chr17	+	1666	15	FSM	ENSG00000131748.16	ENST00000544210.6	1666	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	123.627567759801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACTGGCTGGAGGAAGT	-12	True	NA	NA	False	NA	NA	NA	39637140	39663094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657840_39657972_39658027_39658404_39658523_39658708_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40733.nic	chr17	+	2044	15	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	86.6732074978144	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	-13	True	NA	32	True	ATTAAA	-27	NA	39637139	39663484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657840_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40739.known	chr17	+	2770	15	FSM	ENSG00000131748.16	ENST00000336308.10	2770	15	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	26.6095157139436	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGCTCAGTAATCAAT	-9	True	NA	17	True	ATTAAA	-18	NA	39637143	39664201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40740.nic	chr17	+	2136	15	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_14	96.4444695889076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	7914	False	NA	32	True	ATTAAA	-27	NA	39637083	39663484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_40747.nic	chr17	+	2014	14	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	95.4569204858352	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	7914	False	NA	32	True	ATTAAA	-27	NA	39637083	39663484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40748.known	chr17	+	1949	14	FSM	ENSG00000131748.16	ENST00000394250.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	100.81044371557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTATTAAGCCAAT	-9	True	NA	-18	True	NA	NA	NA	39637143	39663434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_40753.known	chr17	+	1989	14	FSM	ENSG00000131748.16	ENST00000580611.5	1989	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	134.230791271764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	0	True	NA	32	True	ATTAAA	-27	NA	39637152	39663484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39637232_39653480_39653751_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_40754.known	chr17	+	960	2	FSM	ENSG00000173991.6	ENST00000309889.3	960	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATCTCTTTCCTTGTG	0	True	NA	15	True	AATAAA	-20	NA	39665348	39666554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39665470_39665715
transcript_40755.known	chr17	+	821	3	FSM	ENSG00000141744.4	ENST00000394246.1	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	23	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	12	False	NA	6	True	AATAAA	-15	NA	39667980	39670473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39668071_39669628_39669837_39669950
transcript_40756.nnic	chr17	+	823	3	NNC	ENSG00000141744.4	novel	821	3	NA	NA	467	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	25	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	-6	True	NA	6	True	AATAAA	-15	NA	39668929	39670473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_39669022_39669628_39669837_39669950
transcript_40759.known	chr17	-	2687	8	FSM	ENSG00000161395.14	ENST00000300658.9	2687	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	23.8353193597147	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-19	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_4076.known	chr1	+	3657	26	NNC	ENSG00000132849.22	novel	5349	34	NA	NA	0	42545	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	15.0208388580665	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACATTATCAATTCC	12	True	NA	NA	False	AAAAAG	-11	NA	61742476	61918076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908481_61918023
transcript_40761.known	chr17	-	3028	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	16.8498269031663	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-19	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_40765.known	chr17	+	849	4	FSM	ENSG00000141736.14	ENST00000584014.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	7.71722460186015	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCGCAGGACAGAAGA	6	True	NA	NA	False	NA	NA	NA	39688100	39695181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39688279_39688695_39688801_39693260_39693326_39694680
transcript_40766.known	chr17	-	1397	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	22.6421435969889	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCTGTACAAAGCCTGG	0	True	NA	NA	False	AGTAAA	-15	NA	39730532	39728509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
transcript_40767.known	chr17	-	806	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_2	24.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTAACTAGTGTGTGTT	-4	True	NA	-8	True	AGTAAA	-18	NA	39730510	39729157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39729762_39730193_39730292_39730406
transcript_40769.known	chr17	-	1999	1	FSM	ENSG00000141741.12	ENST00000582963.1	1999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGATACTGACACCATT	38	False	NA	NA	False	AGTAAA	-29	NA	39730494	39728495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39728500_39730500
transcript_40770.known	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	594	junction_1	23.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	41	False	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39729606_39729684_39729762_39730193
transcript_40771.known	chr17	-	804	6	FSM	ENSG00000161395.14	ENST00000584620.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	60.4297939761505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACATCAGCTGTCCTG	37	False	NA	NA	False	NA	NA	NA	39688001	39673874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39674055_39674616_39674680_39676613_39676756_39684596_39684750_39685921_39686020_39687833
transcript_40772.known	chr17	+	2233	15	FSM	ENSG00000141738.14	ENST00000309156.9	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	37.0427910307382	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	0	True	NA	24	True	AATAAA	-18	NA	39737937	39747285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_40774.known	chr17	+	2093	15	FSM	ENSG00000141738.14	ENST00000394211.7	2093	15	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	28.7473157575678	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	-3	True	NA	24	True	AATAAA	-18	NA	39738336	39747285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_40789.known	chr17	-	2209	4	FSM	ENSG00000073605.19	ENST00000479136.5	2209	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	9845	False	NA	0	True	ATTAAA	-23	NA	39907739	39904594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110
transcript_40792.known	chr17	-	2109	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	15.1070255914995	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCTGGCCTTCGC	-1	True	NA	-8	True	AATAAA	-20	NA	39927601	39921042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
transcript_40795.known	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_3	58.5512419499732	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	0	True	NA	69	True	AATAAA	-16	NA	39980806	39997959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
transcript_40798.known	chr17	-	3480	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_25	39.892134563094	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-2	True	NA	-13	True	AATAAA	-17	NA	40054408	40019103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
transcript_40799.known	chr17	+	2538	10	FSM	ENSG00000126351.13	ENST00000264637.8	2538	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	5.18544972870135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	540	False	NA	21	True	CATAAA	-18	NA	40062809	40093867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093019
transcript_40800.known	chr17	+	2421	10	FSM	ENSG00000126351.13	ENST00000584985.5	2421	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	8.75312995165828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	540	False	NA	21	True	CATAAA	-18	NA	40062809	40093867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093136
transcript_40801.known	chr17	-	2630	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	3.39867921524866	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	-6	True	NA	-6	True	NA	NA	NA	40100589	40092792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
transcript_40803.known	chr17	-	604	3	FSM	ENSG00000008838.21	ENST00000580302.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	76	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAATCCTCTCATCTTG	NA	False	NA	NA	False	NA	NA	NA	40054742	40053347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40053381_40053468_40053658_40054360
transcript_40804.known	chr17	+	3890	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_13	71.3226687450987	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	11	True	NA	18	True	AATAAA	-19	NA	40140536	40172171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
transcript_40806.known	chr17	+	580	4	FSM	ENSG00000108349.17	ENST00000581849.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_3	31.0519278342299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTGGGTAAAAAGGGC	11	True	NA	NA	False	NA	NA	NA	40140536	40162023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752
transcript_40808.known	chr17	+	577	2	FSM	ENSG00000108349.17	ENST00000583649.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTCTGTTTTATTTC	18	True	NA	NA	False	NA	NA	NA	40140543	40141547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40140780_40141206
transcript_40809.nic	chr17	+	2631	8	ISM	ENSG00000108352.13	ENST00000545893.5	1527	11	2110	-1819	-822	0	3prime_fragment	FALSE	canonical	3	59	junction_6	3.74165738677394	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTGTTCTCCATT	2251	False	NA	14	True	GATAAA	-14	NA	40190647	40195650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_40190763_40191315_40191495_40191581_40191673_40192212_40192264_40192605_40192694_40192925_40192991_40193362_40193418_40193663
transcript_40811.known	chr17	+	7492	8	FSM	ENSG00000171475.14	ENST00000323571.9	7492	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	6.5993196928292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTCCTGACTTGAAA	6	True	NA	21	True	AATAAA	-21	NA	40219303	40284136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_40813.known	chr17	+	1529	8	FSM	ENSG00000171475.14	ENST00000583130.5	1529	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.5382865837286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCCCGTTCCTCAGG	117	False	NA	NA	False	NA	NA	NA	40219789	40278231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40219921_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_40820.known	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_11	66.7073291969859	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	-24	True	NA	8	True	AATAAA	-19	NA	40287878	40304657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_40825.known	chr17	+	1948	12	FSM	ENSG00000094804.12	ENST00000649662.1	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	240.022106419904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTATCTCTAG	30	True	NA	-72	True	CATAAA	-41	NA	40287932	40302236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40287950_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_40842.known	chr17	+	2024	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	15.1801679832603	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTACTGGGGACCTTC	14	True	NA	NA	False	NA	NA	NA	40318280	40356331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_40844.known	chr17	-	5695	35	FSM	ENSG00000131747.15	ENST00000423485.6	5695	35	0	0	0	0	multi-exon	TRUE	canonical	1	375	junction_4	170.132952285227	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAGAATGCCTCTTTTA	-2	True	NA	-5	True	AATAAA	-19	NA	40417896	40388524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40845.nic	chr17	-	4013	30	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	4163	-47	-3126	5prime_fragment	FALSE	canonical	3	914	junction_20	113.168999086941	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAGAGAAATCCCTG	NA	False	NA	-103	True	AAGAAA	-34	NA	40417943	40392687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40846.nic	chr17	-	3943	29	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	6944	-47	914	5prime_fragment	FALSE	canonical	3	914	junction_19	113.207435574647	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAGAAAAGAGAACCAG	NA	False	NA	NA	False	AAAACA	-13	NA	40417943	40395468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40848.nic	chr17	-	3862	28	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	7768	-47	90	5prime_fragment	FALSE	canonical	3	914	junction_18	115.246964497069	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTAAGGTAATACTCT	NA	False	NA	NA	False	AATAAA	-3	NA	40417943	40396292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40851.nic	chr17	-	3565	26	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	10288	-47	-2430	5prime_fragment	FALSE	canonical	3	914	junction_16	116.819149115203	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAAAGATGAACTCT	NA	False	NA	-40	True	NA	NA	NA	40417943	40398812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_40854.nic	chr17	-	204	2	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-47	28340	-47	-3385	5prime_fragment	FALSE	canonical	3	1317	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAAATGAAGATGCT	NA	False	NA	-43	True	AATGAA	-20	NA	40417943	40416864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_40416896_40417770
transcript_40855.known	chr17	+	2205	4	FSM	ENSG00000141753.7	ENST00000269593.5	2205	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	1.24721912892465	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGTTTGGTTGAT	1	True	NA	34	True	AAAACA	-23	NA	40443449	40457725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40444085_40452984_40453143_40453927_40454063_40456448
transcript_40856.known	chr17	-	2488	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	451.564973862937	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAAAAGGTCTCAG	-3	True	NA	-14	True	AATAAA	-6	NA	40647837	40627721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40858.known	chr17	-	2491	12	FSM	ENSG00000073584.20	ENST00000647294.1	2491	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	474.124700268778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTCCAAATGTAATAAAAA	-10	True	NA	-37	True	AATAGA	-44	NA	40647844	40627744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40639980_40640079_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40859.known	chr17	-	5150	11	FSM	ENSG00000073584.20	ENST00000348513.12	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_2	90.2576312563098	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTTAAGAGCCTGA	16	True	NA	-1	True	ATTAAA	-18	NA	40647818	40624961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40866.known	chr17	-	2388	10	FSM	ENSG00000073584.20	ENST00000578112.6	2388	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	396.703764216083	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCAGTGTTTTTAATGC	-14	True	NA	-2	True	AATAAA	-18	NA	40647848	40627709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645795_40645848_40647772
transcript_40867.known	chr17	-	2840	10	FSM	ENSG00000073584.20	ENST00000647508.1	2840	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	390.589140329336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAAGGTCTCAGTGT	287	False	NA	-11	True	AATAAA	-9	NA	40648370	40627718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
transcript_40870.known	chr17	-	2519	9	FSM	ENSG00000073584.20	ENST00000646448.1	2519	9	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_2	73.7648290176287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTGTTCTAAATA	1	True	NA	28	True	AAAAAG	-15	NA	40647833	40628775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40628994_40630713_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40871.known	chr17	-	2319	6	FSM	ENSG00000073584.20	ENST00000493660.6	2319	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	495.896118153792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAACCAGTCTCAAAAA	-8	True	NA	NA	False	NA	NA	NA	40647842	40634162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
transcript_40872.known	chr17	-	2703	6	FSM	ENSG00000213424.9	ENST00000394052.5	2703	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.78567765543682	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-23	True	NA	NA	False	AATAAA	-19	NA	40665177	40654664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40665003
transcript_40875.known	chr17	-	2156	4	FSM	ENSG00000073584.20	ENST00000474246.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_2	25.8499946271217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCCTAGTTATGCAT	-12	True	NA	-5	True	AATAAA	-16	NA	40647846	40640573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40876.known	chr17	-	2828	3	FSM	ENSG00000073584.20	ENST00000643806.1	2828	3	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_1	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTATTGTTGACCATAAA	10	True	NA	NA	False	NA	NA	NA	40647824	40642895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40645620_40645795_40645848_40647772
transcript_40877.known	chr17	-	1973	11	FSM	ENSG00000073584.20	ENST00000447024.6	1973	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	360.038122981442	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCCAACAGAAATAAAATG	-8	True	NA	NA	False	NA	NA	NA	40647842	40629455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_40878.nic	chr17	+	622	4	NIC	ENSG00000167920.11	novel	611	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	41.9602986961088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTGTGTGTGTGG	-20	True	NA	7	True	ATTAAA	-12	NA	40819115	40836267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_40819209_40833114_40833200_40834381_40834520_40835961
transcript_40879.known	chr17	+	2070	3	FSM	ENSG00000167920.11	ENST00000301665.8	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	17	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTGTGGTTT	NA	False	NA	10	True	ATTAAA	-15	NA	40819112	40836270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40819209_40833114_40833200_40834381
transcript_40880.known	chr17	+	854	3	FSM	ENSG00000167920.11	ENST00000436612.5	854	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	49.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTTTCATGACTTCT	NA	False	NA	13	True	AATAAA	-15	NA	40819105	40835085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_40819171_40833114_40833200_40834381
transcript_40881.known	chr17	-	2143	8	FSM	ENSG00000186395.9	ENST00000269576.6	2143	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	488.8481672383	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	-1	True	NA	-4	True	AATAAA	-22	NA	40822614	40818116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_40818483_40818786_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_40882.known	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	4345	junction_5	224.824020069031	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-2	True	NA	-14	True	AATAAA	-19	NA	41528308	41523616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
transcript_40886.known	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	4217	junction_1	379.415632548558	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	-2	True	NA	10	True	AATAAA	-17	NA	41688884	41692668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
transcript_40891.known	chr17	+	1428	3	FSM	ENSG00000173812.11	ENST00000482111.1	1428	3	0	0	0	0	multi-exon	FALSE	canonical	3	4217	junction_1	463.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTGTTTTCAGA	8	False	NA	8	True	TTTAAA	-10	NA	41688894	41691622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41689070_41689777_41690190_41690781
transcript_40893.known	chr17	+	1120	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2557	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	14	False	NA	16	True	AATAAA	-2	NA	41688900	41691630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41689070_41690087_41690190_41690781
transcript_40896.known	chr17	+	2170	2	FSM	ENSG00000173812.11	ENST00000462917.1	2170	2	0	0	0	0	multi-exon	FALSE	canonical	3	5144	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	-2	True	NA	32	True	AATAAA	-18	NA	41688884	41691646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41690190_41690781
transcript_40908.known	chr17	+	2585	10	FSM	ENSG00000141756.19	ENST00000321562.9	2585	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	17.1658575861116	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	7	True	NA	13	True	AATAAA	-13	NA	41813003	41823213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_40919.nic	chr17	+	1392	4	ISM	ENSG00000141756.19	ENST00000585664.5	598	5	134	-475	24	475	3prime_fragment	FALSE	canonical	3	109	junction_3	7.25718035235908	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGGGTGCTTTATTC	114	False	NA	NA	False	NA	NA	NA	41812813	41818971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381
transcript_40921.nic	chr17	+	1343	3	ISM	ENSG00000141756.19	ENST00000489591.5	2826	9	-272	4240	22	475	5prime_fragment	FALSE	canonical	2	10	junction_1	49.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGGGTGCTTTATTC	17	True	NA	NA	False	NA	NA	NA	41812716	41818971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41813280_41818088_41818279_41818381
transcript_40922.nic	chr17	+	1355	3	ISM	ENSG00000141756.19	ENST00000585664.5	598	5	274	-475	-35	475	intron_retention	FALSE	canonical	3	113	junction_2	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGGGTGCTTTATTC	0	True	NA	NA	False	NA	NA	NA	41812953	41818971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_41813280_41817057_41817204_41818088
transcript_40925.nic	chr17	-	1399	10	NIC	ENSG00000141698.17	novel	1573	9	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	258.551425264246	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	NA	False	NA	-47	True	TTTAAA	-17	NA	41836298	41825226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587_41835683_41835858_41835958_41836181
transcript_40926.nic	chr17	-	1380	9	NIC	ENSG00000141698.17	novel	1408	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	209.285689907361	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-1	True	NA	-47	True	TTTAAA	-17	NA	41836271	41825226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836078
transcript_40927.known	chr17	-	1408	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	162.772655873153	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTGATTGTGTCTG	-9	True	NA	NA	False	NA	NA	NA	41836232	41825056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_40931.known	chr17	-	1729	8	FSM	ENSG00000141698.17	ENST00000470690.5	1729	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	201.718130274977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-5	True	NA	-47	True	TTTAAA	-17	NA	41836228	41825226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587
transcript_40932.known	chr17	-	730	8	FSM	ENSG00000141698.17	ENST00000415460.5	730	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	235.707359205591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGGCGGGAGCGCTAC	-18	True	NA	NA	False	NA	NA	NA	41836241	41825653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_40936.known	chr17	-	4293	29	FSM	ENSG00000131473.17	ENST00000352035.7	4293	29	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_16	268.646399110619	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGCTCCTGGCATC	1	True	NA	-37	True	AATAAA	-23	NA	41918951	41866917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_40937.known	chr17	-	4309	29	FSM	ENSG00000131473.17	ENST00000590151.5	4309	29	0	0	0	0	multi-exon	TRUE	canonical	3	482	junction_28	336.929086283261	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGCTCCTGGCATCC	26	False	NA	-36	True	AATAAA	-24	NA	41918962	41866916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_40941.known	chr17	-	4318	28	FSM	ENSG00000131473.17	ENST00000353196.5	4318	28	0	0	0	0	multi-exon	TRUE	canonical	3	593	junction_15	285.329847869178	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGAAGGCATACTGCT	NA	False	NA	-50	True	AATAAA	-10	NA	41919019	41866930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_40942.known	chr17	-	3682	28	FSM	ENSG00000131473.17	ENST00000393896.6	3682	28	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_27	353.414413400828	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTCTGCTACCTGCT	NA	False	NA	-13	True	AATAAA	-20	NA	41919022	41867573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_40950.known	chr17	+	3146	12	FSM	ENSG00000204815.10	ENST00000377540.6	3146	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	2.77235466945035	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTCACTCACTTCCT	-24	True	NA	NA	False	AATAAA	-38	NA	41930616	41966503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41930838_41935216_41935349_41935598_41935750_41936472_41936535_41936761_41936928_41938556_41938782_41938964_41939173_41945135_41945223_41949152_41949350_41955216_41955318_41961381_41961467_41964992
transcript_40956.known	chr17	-	1774	14	FSM	ENSG00000168259.17	ENST00000426588.7	1774	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	203.049881649485	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGAG	5	True	NA	16	True	NA	NA	NA	42017151	41976478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
transcript_40957.known	chr17	-	1729	14	FSM	ENSG00000168259.17	ENST00000674166.1	1729	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_13	197.389112005859	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-6	True	NA	-28	True	NA	NA	NA	42017162	41976522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017051
transcript_40958.known	chr17	-	1659	14	FSM	ENSG00000168259.17	ENST00000674453.1	1659	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	218.540397467937	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAACCAATGCCGAAGAC	13	True	NA	-78	True	NA	NA	NA	42017425	41976572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982249_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_40959.known	chr17	-	1692	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_13	176.499962284388	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGGGGGTGGACAGGGA	-16	True	NA	-43	True	NA	NA	NA	42018526	41976537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_40963.known	chr17	-	1658	13	FSM	ENSG00000168259.17	ENST00000674306.1	1658	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	223.82103155572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAGAATAAA	-5	True	NA	22	True	ATTAAA	-4	NA	42017443	41976472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41997114_41997240_42000481_42000571_42017339
transcript_40966.known	chr17	-	1806	14	FSM	ENSG00000168259.17	ENST00000457167.9	1806	14	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_13	93.9573112182386	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGCTCTGGCATCTG	-1	True	NA	-20	True	AATAAA	-19	NA	42017439	41976434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_40968.known	chr17	-	2243	9	FSM	ENSG00000168259.17	ENST00000590847.2	2243	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_8	201.315944164887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATCTATAATAGCAAAA	16	True	NA	NA	False	NA	NA	NA	42018494	41986565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_40973.known	chr17	+	997	5	FSM	ENSG00000168256.18	ENST00000485789.5	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	122.336370307444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCATCAGCGACACACA	6	False	NA	NA	False	NA	NA	NA	42020077	42024265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022564_42022641_42023653
transcript_40975.known	chr17	+	992	5	FSM	ENSG00000168256.18	ENST00000479407.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	131.363998112116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCATCAGCGACACACA	6	False	NA	NA	False	NA	NA	NA	42020077	42024265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022569_42022641_42023653
transcript_40978.known	chr17	+	5172	4	FSM	ENSG00000173786.17	ENST00000393892.8	5172	4	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	32.8667342798493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGTATTTGATTCCAT	-1	True	NA	16	True	AATAAA	-21	NA	41966794	41977740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41966888_41968067_41968741_41971891_41972032_41973474
transcript_40980.known	chr17	+	2948	4	FSM	ENSG00000168256.18	ENST00000307641.9	2948	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	147.88809583225	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCCTCCCCCTTTTT	394	False	NA	23	True	AATAAA	-24	NA	42017019	42025644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42017627_42021563_42021672_42022398_42022641_42023653
transcript_40981.known	chr17	+	1041	4	FSM	ENSG00000168256.18	ENST00000491638.5	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	147.822716642455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTCTGAGTTCCTATT	-15	True	NA	NA	False	NA	NA	NA	42020103	42024220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022375_42022641_42023653
transcript_40983.known	chr17	+	1461	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	129.213862345424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGATGGGCCTCACT	-13	True	NA	NA	False	NA	NA	NA	42020105	42024833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
transcript_40985.known	chr17	+	2453	4	FSM	ENSG00000168256.18	ENST00000393885.9	2453	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	17.5562587763516	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCCTCCCCTCCCCCTT	-29	True	NA	20	True	AATAAA	-21	NA	42020089	42025641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021563_42021672_42022398_42022641_42023653
transcript_40987.known	chr17	+	1598	4	FSM	ENSG00000168256.18	ENST00000393881.7	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	147.420034821142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	-22	True	NA	NA	False	NA	NA	NA	42020096	42024774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42021544_42021672_42022398_42022641_42023653
transcript_40989.known	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.31245915016974	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-4	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
transcript_40991.known	chr17	+	563	3	FSM	ENSG00000168256.18	ENST00000587337.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCCCCTCAGCCGGA	0	True	NA	NA	False	NA	NA	NA	42020071	42023841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42020205_42022398_42022641_42023653
transcript_40992.known	chr17	+	2583	4	FSM	ENSG00000173786.17	ENST00000393888.1	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	186.541029147894	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGTCTCTCTTACC	-4	True	NA	17	True	AATAAA	-17	NA	41966814	41975176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_41966888_41968072_41968741_41971891_41972032_41973474
transcript_40996.known	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	52.681685622235	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-1	True	NA	-8	True	AATATA	-23	NA	42154989	42124978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
transcript_41.known	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00112_+_0_1100
transcript_41000.known	chr17	-	608	3	FSM	ENSG00000108774.15	ENST00000546881.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	385.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGGTGGGGGGTGGGC	-4	True	NA	NA	False	NA	NA	NA	42154992	42128550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42128801_42130336_42130591_42154888
transcript_41002.known	chr17	-	2408	10	FSM	ENSG00000167925.16	ENST00000587427.6	2408	10	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_9	3.76468318802165	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-14	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42189922_42190184_42190271_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_41003.known	chr17	-	2496	10	FSM	ENSG00000167925.16	ENST00000414034.7	2496	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.17241973881384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGCCTCAGGGTCTGC	-14	True	NA	-1	True	AATAAA	-15	NA	42194494	42189087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42189922_42190184_42190360_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_41008.known	chr17	-	5079	19	FSM	ENSG00000173757.10	ENST00000293328.8	5079	19	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_11	19.1827629673551	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATTGAGTCCTGTTTTT	1	True	NA	-10	True	AATAAA	-18	NA	42276391	42199176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42201865_42202339_42202448_42202756_42202809_42207557_42207729_42210170_42210302_42210402_42210498_42211983_42212191_42216013_42216107_42217159_42217283_42217376_42217465_42218150_42218331_42218722_42218879_42219311_42219464_42219711_42219843_42223381_42223557_42224778_42224869_42227528_42227686_42231999_42232138_42276247
transcript_41009.known	chr17	-	2633	24	FSM	ENSG00000168610.16	ENST00000404395.3	2633	24	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	122.695605953216	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGATCTGCTTTTAT	-3	True	NA	-22	True	AATAGA	-13	NA	42388414	42315558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_41010.known	chr17	-	4834	24	FSM	ENSG00000168610.16	ENST00000677723.1	4834	24	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_23	140.264238887804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	18	True	NA	-42	True	NA	NA	NA	42388474	42313420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348521_42388278
transcript_41011.known	chr17	-	4890	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	110.018506777943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-19	True	NA	-42	True	NA	NA	NA	42388511	42313420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_41014.known	chr17	-	4748	23	FSM	ENSG00000168610.16	ENST00000679166.1	4748	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	141.450280375056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	20	True	NA	-42	True	NA	NA	NA	42388472	42313420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_41016.known	chr17	-	3395	24	FSM	ENSG00000168610.16	ENST00000677152.1	3395	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	161.998448031027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTAACAGCCTCCTT	15	True	NA	NA	False	AAAAAG	-4	NA	42388477	42314847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42315801_42316788_42316890_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_41017.known	chr17	+	4106	22	FSM	ENSG00000033627.17	ENST00000343619.9	4106	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	81.4654330378557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCCTGTCACTGTGC	-21	True	NA	21	True	AATAAA	-21	NA	42458877	42522579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42508571_42508590_42513860_42513979_42514288_42514461_42521026
transcript_41018.known	chr17	+	4110	21	FSM	ENSG00000033627.17	ENST00000264649.10	4110	21	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	46.9270710784298	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGTCACTGTGCCCA	-19	True	NA	24	True	AATAAA	-24	NA	42458879	42522582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_41019.known	chr17	+	3028	21	FSM	ENSG00000033627.17	ENST00000393829.6	3028	21	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_5	30.7318645708327	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGACTTTGAGTTCCCT	1773	False	NA	NA	False	NA	NA	NA	42458843	42521485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_41022.nic	chr17	+	3942	20	NIC	ENSG00000033627.17	novel	4106	22	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_19	56.4849893035353	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCCTGTCACTGTGC	1781	False	NA	21	True	AATAAA	-21	NA	42458851	42522579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42521026
transcript_41024.known	chr17	+	2774	20	FSM	ENSG00000033627.17	ENST00000537728.5	2774	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	63.3306409497211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGAGCCAGTCTGCAT	-21	True	NA	NA	False	NA	NA	NA	42458877	42521394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_41025.known	chr17	+	1797	5	FSM	ENSG00000033627.17	ENST00000588629.1	1797	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	22.7087538187369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGACTTGGTTGGGC	-41	True	NA	NA	False	NA	NA	NA	42458857	42471439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089
transcript_41028.known	chr17	+	1976	11	FSM	ENSG00000068120.15	ENST00000590958.5	1976	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	186.860509471638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGCTCACCCTGGTT	-3	True	NA	NA	False	NA	NA	NA	42562150	42566037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42562220_42562355_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_41030.known	chr17	+	2071	10	FSM	ENSG00000068120.15	ENST00000421097.6	2071	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	152.072351201657	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	-7	True	NA	0	True	NA	NA	NA	42562146	42566260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42562220_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_41033.nic	chr17	+	1766	10	NIC	ENSG00000068120.15	novel	2479	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	162.522325152083	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	-6	True	NA	17	True	ATTAAA	-17	NA	42562147	42566277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_42562220_42562932_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_41034.nic	chr17	+	2351	10	NIC	ENSG00000068120.15	novel	1976	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	141.657472468532	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	-2	True	NA	17	True	ATTAAA	-17	NA	42562151	42566277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_41036.known	chr17	+	2479	9	FSM	ENSG00000068120.15	ENST00000393818.3	2479	9	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	34.7922405142296	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	-6	True	NA	17	True	ATTAAA	-17	NA	42562147	42566277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_41041.nnic	chr17	+	1302	8	Fusion	ENSG00000068120.15_ENSG00000266929.1	novel	2479	9	NA	NA	-127	0	multi-exon	FALSE	canonical	3	11	junction_1	182.043502313853	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	8357	False	NA	17	True	ATTAAA	-17	NA	42562006	42566277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr17_+_42562220_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_41054.known	chr17	-	2313	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCCTGTCCTCTTTTC	19	True	NA	-1	True	AAAACA	-18	NA	42554748	42552435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42552400_42554700
transcript_41060.known	chr17	+	2360	8	FSM	ENSG00000108788.12	ENST00000435881.7	2360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	130.492317390562	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACTGCCTGTCA	-4	True	NA	10	True	AATAAA	-23	NA	42567099	42573203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567167_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_41064.known	chr17	+	2586	8	FSM	ENSG00000108788.12	ENST00000246912.8	2586	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	64.3979971801633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567329_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_41066.known	chr17	-	1408	8	FSM	ENSG00000131470.15	ENST00000253789.9	1408	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	158.147696402923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAATATGTAGTGCTGT	2905	False	NA	-23	True	AATAAA	-4	NA	42577831	42572322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573588_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_41069.known	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_7	87.357113654942	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-20	True	NA	-10	True	AATAAA	-17	NA	42577729	42572309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_41072.nic	chr17	-	1283	8	NIC	ENSG00000131470.15	novel	1355	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_4	122.700232024131	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-45	True	NA	-10	True	AATAAA	-17	NA	42577754	42572309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460_42577562_42577652
transcript_41077.known	chr17	+	2334	7	FSM	ENSG00000108788.12	ENST00000346833.8	2334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	168.905052223629	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_41082.known	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_4	71.0297277358024	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	12	True	NA	-43	True	NA	NA	NA	42577697	42572342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
transcript_41083.known	chr17	-	664	7	FSM	ENSG00000131470.15	ENST00000590760.5	664	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	121.371903210294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	13	True	NA	NA	False	NA	NA	NA	42577696	42572961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460
transcript_41084.known	chr17	-	1244	7	FSM	ENSG00000131470.15	ENST00000589505.5	1244	7	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	76.9431608396744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	2941	False	NA	NA	False	NA	NA	NA	42577795	42572961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42574211_42577212_42577303_42577460_42577562_42577652
transcript_41090.known	chr17	+	2537	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	179.391192648915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
transcript_41097.known	chr17	+	542	1	FSM	ENSG00000287710.1	ENST00000655617.1	542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGGCGCGCTTCTGT	558	False	NA	5	True	AATAAA	-15	NA	42577824	42578366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42577800_42578400
transcript_411.known	chr1	-	811	4	FSM	ENSG00000162585.17	ENST00000400918.7	811	4	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	512.693107250548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTCCCAGCAGCGCCC	311	False	NA	NA	False	NA	NA	NA	2194751	2185174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2185514_2193638_2193911_2193997_2194134_2194687
transcript_41100.known	chr17	+	1608	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_8	109.925611210491	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	-4	True	NA	15	True	AATAAA	-19	NA	42609682	42615238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
transcript_41103.known	chr17	+	1719	10	FSM	ENSG00000131462.9	ENST00000681947.1	1719	10	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_8	113.26174209424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	196	False	NA	1	True	AATAAA	-5	NA	42609640	42615224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614658_42614843
transcript_41104.known	chr17	+	1899	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	0	0	0	0	multi-exon	TRUE	canonical	3	1361	junction_7	99.9982715900013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	196	False	NA	3	True	AATAAA	-7	NA	42609640	42615226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
transcript_41106.known	chr17	+	1980	9	FSM	ENSG00000131462.9	ENST00000681490.1	1980	9	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_7	100.786206273478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	196	False	NA	1	True	AATAAA	-5	NA	42609640	42615224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_41107.known	chr17	-	3749	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_6	21.1035393950873	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGAGACTGATGCTG	0	True	NA	-37	True	AATAAA	-17	NA	42609374	42579514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
transcript_41112.known	chr17	+	1782	11	FSM	ENSG00000037042.9	ENST00000251412.8	1782	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	161.0064905524	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	-3	True	NA	24	True	AATAAA	-26	NA	42659283	42667006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42662972_42663053_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_41114.nic	chr17	+	1687	10	NIC	ENSG00000037042.9	novel	1782	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	159.387020243878	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	12	True	NA	24	True	AATAAA	-26	NA	42659298	42667006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_41119.known	chr17	-	4633	21	FSM	ENSG00000108799.13	ENST00000428826.7	4633	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	8.93084542470644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAAGTTGTGTACTG	7	True	NA	-7	True	AATAAA	-14	NA	42745040	42700274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_41121.nic	chr17	-	1653	13	ISM	ENSG00000108799.13	ENST00000586103.5	2752	19	-74	6674	-40	-1822	5prime_fragment	FALSE	canonical	3	24	junction_12	9.10585891976516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGCACA	NA	False	NA	NA	False	NA	NA	NA	42745089	42709866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_41128.known	chr17	+	858	4	FSM	ENSG00000131477.11	ENST00000589683.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	34.7083083233203	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	2	True	NA	9	True	AATAAA	-18	NA	42760774	42763041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42761013_42761833_42761900_42762354_42762464_42762596
transcript_41129.known	chr17	+	548	4	FSM	ENSG00000131477.11	ENST00000588928.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	57.3120115391762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTTTGCCAACTGCT	32	False	NA	NA	False	NA	NA	NA	42760804	42762698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42761076_42761833_42761900_42762354_42762464_42762596
transcript_41130.known	chr17	-	1882	4	FSM	ENSG00000197291.9	ENST00000662231.1	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTGGAGGTTGCAGTAA	211	False	NA	NA	False	NA	NA	NA	42761110	42753990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42755214_42759738_42759881_42760425_42760712_42760879
transcript_41132.known	chr17	+	1088	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_3	43.4400736647626	1315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	-12	True	NA	29	True	ATTAAA	-14	NA	42773448	42779599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
transcript_41133.known	chr17	-	780	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_1	0	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGGCTGAGAGGCAG	-5	True	NA	-1	True	AATAAA	-28	NA	42798704	42797624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42798168_42798467
transcript_41145.known	chr17	-	2112	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	173.838150241363	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	10	True	NA	-12	True	AATAAA	-25	NA	42824263	42810133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
transcript_41146.known	chr17	-	2109	12	FSM	ENSG00000126581.13	ENST00000590099.6	2109	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	166.478946625156	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-9	True	NA	-12	True	AATAAA	-25	NA	42824282	42810133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
transcript_41159.known	chr17	+	3144	11	FSM	ENSG00000131467.12	ENST00000293362.7	3144	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	516.524355669701	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTAGCCTTCTGGTTTCC	45	False	NA	13	True	AATAAA	-22	NA	42833470	42843757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838691_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_41160.known	chr17	+	3182	11	FSM	ENSG00000131467.12	ENST00000590720.6	3182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1429	junction_6	134.082661071445	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCTGGTTTCCAAT	-29	True	NA	16	True	AATAAA	-25	NA	42833396	42843760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_41185.known	chr17	-	2504	11	FSM	ENSG00000126581.13	ENST00000543382.6	2504	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	174.500429798898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCACTTAACAATATGAA	-14	True	NA	39	True	NA	NA	NA	42824287	42810413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42819610_42820773_42820842_42823747_42823880_42824154
transcript_41189.known	chr17	+	3366	10	FSM	ENSG00000131467.12	ENST00000541124.5	3366	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	545.221056086428	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCCTTCTGGTTTCCA	26	False	NA	14	True	AATAAA	-23	NA	42833141	42843758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_4119.known	chr1	+	3831	4	FSM	ENSG00000240563.2	ENST00000498273.2	3831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_1	54.2913948573395	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATACTGTTTGCTTA	-12	True	NA	26	True	ATTAAA	-16	NA	62194848	62212328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782
transcript_41201.known	chr17	+	826	9	FSM	ENSG00000131467.12	ENST00000592169.2	826	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	540.644985179739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAGTAATCACACCTC	70	False	NA	-38	True	NA	NA	NA	42833495	42841671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42833674_42834343_42834377_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_41210.known	chr17	-	2042	18	FSM	ENSG00000108825.18	ENST00000409399.6	2042	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	138.035274564951	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGTTGCGCTACCACT	801	False	NA	-35	True	AATAAA	-13	NA	42980490	42950529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045_42980276_42980365
transcript_41215.known	chr17	-	1320	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_11	29.9740934974143	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	4	True	NA	-31	True	AATAAA	-17	NA	42964454	42950525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_41241.known	chr17	-	983	6	FSM	ENSG00000266967.7	ENST00000441280.7	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	23.9415956026327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGTCATGGAACTG	15	True	NA	NA	False	NA	NA	NA	42964443	42955886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_41242.known	chr17	-	1446	6	FSM	ENSG00000267060.7	ENST00000424284.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	18.4867520132661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGGTAAACTATTAGGA	1627	False	NA	2	True	AATAAA	-29	NA	42979664	42968087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979627
transcript_41243.known	chr17	-	1790	17	FSM	ENSG00000108825.18	ENST00000360221.8	1790	17	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_16	136.493990252318	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	1288	False	NA	-31	True	AATAAA	-17	NA	42980003	42950525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42979904
transcript_41244.known	chr17	-	2150	17	FSM	ENSG00000108825.18	ENST00000421990.7	2150	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	133.940037306811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAAATAGATTGACTC	763	False	NA	-55	True	NA	NA	NA	42980528	42950549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_41245.known	chr17	-	1543	7	FSM	ENSG00000267060.7	ENST00000591916.7	1543	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	10.3077640640442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCTCTTGAACTCAT	0	True	NA	-13	True	AATAAA	-14	NA	42980080	42968102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_41252.known	chr17	+	505	5	FSM	ENSG00000131469.15	ENST00000253788.12	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	6211	junction_1	2029.62428789173	11001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	-3	True	NA	63	True	ATTAAA	-18	NA	42998418	43002959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998472_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_41255.known	chr17	+	585	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	4501.65866653615	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAAGCCTGTGTCT	2	True	NA	53	True	ATTAAA	-8	NA	42998272	43002949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_41260.known	chr17	+	318	4	FSM	ENSG00000131469.15	ENST00000588830.1	318	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	3474.12860377326	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	14	True	NA	63	True	ATTAAA	-18	NA	42998435	43002959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998472_42998748_42998832_43002672_43002784_43002871
transcript_41264.known	chr17	+	730	4	FSM	ENSG00000131469.15	ENST00000589913.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	8517	junction_3	1257.51112210677	2494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	-2	True	NA	63	True	ATTAAA	-18	NA	42998470	43002959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_42998832_42999932_43000103_43002672_43002784_43002871
transcript_41265.known	chr17	+	1872	3	FSM	ENSG00000131469.15	ENST00000593262.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	8517	junction_2	1525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	-3	True	NA	52	True	ATTAAA	-7	NA	42998418	43002948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43000103_43002672_43002784_43002871
transcript_41266.known	chr17	+	1182	7	FSM	ENSG00000068079.8	ENST00000415816.7	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	8.75595035770913	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	9	True	NA	20	True	AGTAAA	-17	NA	43006783	43014456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013374_43013475_43013663_43013775_43013883_43014107
transcript_41267.nnic	chr17	-	2291	6	NNC	ENSG00000108828.16	novel	2699	6	NA	NA	780	0	intron_retention	TRUE	canonical	1	8	junction_5	728.411532033918	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	842	False	NA	-10	True	AATAAA	-14	NA	43021576	43014606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021534
transcript_41268.known	chr17	-	2699	6	FSM	ENSG00000108828.16	ENST00000355653.8	2699	6	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_1	58.2237065120385	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-10	True	NA	-10	True	AATAAA	-14	NA	43022385	43014606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
transcript_41269.nnic	chr17	-	2334	6	NNC	ENSG00000108828.16	novel	2699	6	NA	NA	-2501	0	intron_retention	FALSE	canonical	2	5	junction_5	729.609045996553	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	43027624	43014606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43027539
transcript_41275.nnic	chr17	+	1201	5	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	228	-2813	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_1	390.596578966073	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGCTTTAGTTTTG	196	False	NA	21	True	AATAAA	-19	NA	43025468	43029228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_41280.known	chr17	+	4162	5	FSM	ENSG00000108830.10	ENST00000587250.4	4162	5	0	0	0	0	multi-exon	TRUE	canonical	3	748	junction_1	138.34558178706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCAGAGTTTCTGTG	-4	True	NA	12	True	AATAAA	-19	NA	43025230	43032041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43025450_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_41287.known	chr17	-	2108	10	FSM	ENSG00000012048.23	ENST00000470026.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	23.7585592114183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGAAAAAAAAGTACAA	1	True	NA	NA	False	NA	NA	NA	43125323	43093583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125181
transcript_41288.known	chr17	-	4497	10	FSM	ENSG00000012048.23	ENST00000354071.7	4497	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	17.3909299476608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAAGTTGCAGCGT	162	False	NA	NA	False	AGTAAA	-27	NA	43125315	43091097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_41289.known	chr17	-	1612	10	FSM	ENSG00000012048.23	ENST00000494123.5	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	17.7770833197694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCCATGTAACTGAAAA	27	False	NA	NA	False	NA	NA	NA	43125450	43094111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_41299.nic	chr17	-	1004	6	NIC	ENSG00000012048.23	novel	558	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	24.8708664907357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCCTGAACATCTAAAAG	-5	True	NA	NA	False	AAAAAG	-9	NA	43125383	43104224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43124736
transcript_413.known	chr1	-	727	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_3	145.684590811794	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-6	True	NA	-14	True	ATTAAA	-40	NA	2194772	2189547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
transcript_41300.known	chr17	-	7270	24	FSM	ENSG00000012048.23	ENST00000471181.7	7270	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	27.8868900908904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-6	True	NA	-5	True	AATAAA	-21	NA	43125483	43044294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43079333_43079400_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_41301.nic	chr17	-	472	6	ISM	ENSG00000012048.23	ENST00000494123.5	1612	10	59	10113	11	0	5prime_fragment	FALSE	canonical	3	31	junction_5	20.1831612984686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCCTGAACATCTAAAAG	-13	True	NA	NA	False	AAAAAG	-9	NA	43125391	43104224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_41302.known	chr17	+	4613	21	FSM	ENSG00000188554.15	ENST00000590996.6	4613	21	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_11	22.3049321899888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGACTGGCTAGTCCTTG	3	True	NA	28	True	AATAAA	-19	NA	43171213	43211688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
transcript_41307.nnic	chr17	+	668	5	NNC	ENSG00000198496.12	novel	1344	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	17.0953209972788	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	2	True	NA	-14	True	NA	NA	NA	43125598	43153649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_43125771_43131207_43131271_43138656_43138923_43140164_43140284_43153601
transcript_41310.known	chr17	+	978	4	FSM	ENSG00000198496.12	ENST00000356906.7	978	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	16.7597401199687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTTTTGTGAGC	-9	True	NA	15	True	AATAAA	-22	NA	43125639	43140333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43125771_43131207_43131271_43138656_43138923_43139815
transcript_41313.known	chr17	+	1895	3	FSM	ENSG00000198496.12	ENST00000657841.1	1895	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	NA	False	NA	-14	True	NA	NA	NA	43125550	43153649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43125771_43138656_43140284_43153601
transcript_41314.nic	chr17	+	1909	3	ISM	ENSG00000198496.12	ENST00000356906.7	978	4	-41	3	-11	-3	intron_retention	FALSE	canonical	3	36	junction_2	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTCCTGGGTTTTGTG	2	True	NA	12	True	AATAAA	-19	NA	43125598	43140330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_43125771_43131207_43131271_43138656
transcript_41316.known	chr17	+	964	2	FSM	ENSG00000188554.15	ENST00000592304.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGGATTCAGAAAGAAGT	14	True	NA	NA	False	NA	NA	NA	43171224	43176676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43171303_43175790
transcript_41320.known	chr17	-	191	1	FSM	ENSG00000274862.1	ENST00000615427.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43278168	43277977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43278000_43278200
transcript_41321.known	chr17	-	191	1	FSM	ENSG00000278048.1	ENST00000613119.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43252019	43251828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43251800_43252000
transcript_41322.known	chr17	-	191	1	FSM	ENSG00000277903.1	ENST00000611544.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	1731	False	NA	NA	False	NA	NA	NA	43271559	43271368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43271400_43271600
transcript_41323.known	chr17	-	191	1	FSM	ENSG00000274062.1	ENST00000617785.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43284329	43284138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43284100_43284300
transcript_41324.known	chr17	-	191	1	FSM	ENSG00000278591.1	ENST00000618602.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43300231	43300040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43300000_43300200
transcript_41326.nnic	chr17	-	1120	3	Fusion	ENSG00000188825.15_ENSG00000279602.1	novel	1186	3	NA	NA	-1	0	multi-exon	FALSE	canonical	2	13	junction_2	2	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAAGCTGTCTCTCCT	-5	True	NA	NA	False	ATTAAA	-23	NA	43361362	43338740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr17_-_43339505_43341177_43341460_43361288
transcript_41327.known	chr17	-	1321	1	FSM	ENSG00000279602.1	ENST00000624705.1	1321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCGGACTTGCCCTGAGT	-4	True	NA	NA	False	AATAAA	-17	NA	43361361	43360040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43360000_43361400
transcript_41328.known	chr17	-	874	5	FSM	ENSG00000188825.15	ENST00000656704.1	874	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.67423461417477	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTGCGTGAATTACTC	9	True	NA	NA	False	AATAAA	-21	NA	43388314	43375929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43376107_43377670_43377814_43379122_43379263_43381272_43381661_43388288
transcript_41330.known	chr17	+	1578	2	FSM	ENSG00000175906.5	ENST00000320033.5	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	0	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATCTCTGTAGTTTT	0	True	NA	6	True	NA	NA	NA	43398992	43401137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43399094_43399660
transcript_41331.known	chr17	+	5549	23	FSM	ENSG00000067596.12	ENST00000262415.8	5549	23	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_22	22.1231059795368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCTAGGCTGGCATCA	-14	True	NA	NA	False	NA	NA	NA	43483974	43525670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43523627
transcript_41332.nic	chr17	+	407	4	ISM	ENSG00000067596.12	ENST00000262415.8	5549	23	-8	34477	4	700	5prime_fragment	FALSE	canonical	3	200	junction_1	3.39934634239519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTGAAGGAACTCTT	-22	True	NA	NA	False	AATGAA	-35	NA	43483966	43491193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164
transcript_41333.known	chr17	-	2182	12	FSM	ENSG00000175832.13	ENST00000393664.6	2182	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_11	75.4757910943788	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-8	True	NA	-6	True	AATAAA	-18	NA	43545671	43527845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
transcript_41335.nnic	chr17	-	2320	11	NNC	ENSG00000175832.13	novel	2147	12	NA	NA	43	0	intron_retention	FALSE	canonical	2	19	junction_10	182.844742883136	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-5	True	NA	-4	True	AATAAA	-20	NA	43545628	43527843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545012_43545273
transcript_41336.nic	chr17	-	2286	11	ISM	ENSG00000175832.13	ENST00000393664.6	2182	12	88	-2	88	0	intron_retention	FALSE	canonical	3	587	junction_7	26.9992592490979	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-1	True	NA	-4	True	AATAAA	-20	NA	43545583	43527843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273
transcript_41338.known	chr17	-	1628	11	FSM	ENSG00000175832.13	ENST00000545089.5	1628	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	184.913493288078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAATTCAGCTCAGCTT	7	True	NA	NA	False	NA	NA	NA	43545713	43528279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
transcript_41341.nnic	chr17	-	2082	10	NIC	ENSG00000175832.13	novel	2147	12	NA	NA	-25	0	combination_of_known_splicesites	TRUE	canonical	3	26	junction_9	190.162763292948	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-2	True	NA	-4	True	AATAAA	-20	NA	43545427	43527843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43545273
transcript_41343.nic	chr17	-	1968	10	ISM	ENSG00000175832.13	ENST00000545089.5	1628	11	286	-436	-25	0	3prime_fragment	FALSE	canonical	3	38	junction_6	185.873978282247	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-2	True	NA	-4	True	AATAAA	-20	NA	43545427	43527843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533858_43533986_43536425_43536480_43544974_43545023_43545273
transcript_41347.nic	chr17	-	1282	4	NIC	ENSG00000108861.9	novel	1019	4	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	49.6051072639367	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGGTATTGTTTTTTT	-1	True	NA	NA	False	AATAAA	-11	NA	43778967	43766130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_41349.known	chr17	-	4095	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-11	True	NA	NA	False	AATAAA	-17	NA	43778977	43766124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43769815_43774711_43774939_43778799
transcript_41351.known	chr17	-	2790	20	FSM	ENSG00000161647.19	ENST00000398389.9	2790	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.15226913524314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGCCTAATGGGTTGT	14	True	NA	NA	False	AATAAA	-17	NA	43833146	43800810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43816676_43816698_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_41353.known	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	4.04450549404473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-10	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_41355.known	chr17	-	4206	12	FSM	ENSG00000108852.16	ENST00000377184.7	4206	12	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_7	18.5142339702223	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTCTGCTTTTCTTT	22	True	NA	-1	True	ATTAAA	-16	NA	43900598	43875356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_4136.nic	chr1	+	1388	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-152	4741	-152	-4741	5prime_fragment	FALSE	canonical	3	1730	junction_1	66	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAATAAATCAAGGAG	NA	False	NA	NA	False	NA	NA	NA	62194696	62207587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_41360.known	chr17	+	434	2	FSM	ENSG00000261514.2	ENST00000565120.2	544	2	106	4	106	-4	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGACTTCTGTGGGCC	74	False	NA	3	True	AATAAA	-17	NA	43938362	43938959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_43938398_43938560
transcript_41362.nic	chr17	+	1324	5	ISM	ENSG00000161653.11	ENST00000293404.8	2114	7	1375	74	-51	-66	3prime_fragment	FALSE	canonical	3	23	junction_3	9.02773504263389	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTTTAATTCCTTT	484	False	NA	16	True	NA	NA	NA	44005996	44008994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_44006238_44006528_44006710_44007322_44007495_44007590_44007774_44008447
transcript_41363.known	chr17	+	1955	4	FSM	ENSG00000161653.11	ENST00000592915.1	1955	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	10.077477638554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTCAGCTTACACTTG	-2	True	NA	14	True	ATTAAA	-16	NA	44006047	44009063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44006238_44006528_44007495_44007590_44007774_44008447
transcript_41366.known	chr17	-	1525	4	FSM	ENSG00000091947.10	ENST00000206380.8	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	6.34209919681348	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTGCTTTTCTGTT	20	True	NA	0	True	AATAAA	-16	NA	44014963	44011187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44012237_44013008_44013156_44014356_44014538_44014815
transcript_41370.nnic	chr17	+	530	2	Antisense	novelGene_ENSG00000091947.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGCTGGATGAATGCCTC	7231	False	NA	88	True	AATAGA	-24	NA	44014334	44019592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_44014513_44019240
transcript_41376.known	chr17	-	2552	5	FSM	ENSG00000161654.10	ENST00000293406.8	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_1	82.0289583013219	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTGAACTTGATTT	-29	True	NA	-3	True	AGTAAA	-18	NA	44066671	44034327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44036301_44037411_44037539_44040146_44040257_44063800_44063935_44066463
transcript_41386.known	chr17	+	1718	7	FSM	ENSG00000141349.9	ENST00000588558.5	1718	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	397.040999842026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCGGCCCCAATAAAGCC	9	True	NA	-10	True	NA	NA	NA	44070749	44076310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44071184_44071627_44071822_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_41390.known	chr17	+	1573	6	FSM	ENSG00000141349.9	ENST00000269097.9	1573	6	0	0	0	0	multi-exon	TRUE	canonical	3	771	junction_4	44.001818144254	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	-6	True	NA	24	True	AATAAA	-18	NA	44070734	44076344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_41395.known	chr17	+	1572	6	FSM	ENSG00000141349.9	ENST00000585361.5	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	315.830080897941	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCAGCCAGGGCGGCCC	10	True	NA	-20	True	NA	NA	NA	44070750	44076300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44071243_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_41396.known	chr17	+	851	5	FSM	ENSG00000141349.9	ENST00000590639.1	851	5	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_3	28.4462211901687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGAAATGGCCAGAAGA	263	False	NA	NA	False	NA	NA	NA	44071166	44075832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075452_44075679
transcript_41408.known	chr17	+	2698	10	FSM	ENSG00000125319.15	ENST00000585683.6	2698	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	27.0573236930798	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-1	True	NA	14	True	AATAAA	-14	NA	44141929	44162476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_41410.nnic	chr17	+	2531	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	36.5171192730204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	25	True	NA	14	True	AATAAA	-14	NA	44141955	44162476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_41411.nic	chr17	+	2573	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	39.1980149369837	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-5	True	NA	14	True	AATAAA	-14	NA	44141970	44162476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_41413.nic	chr17	+	2498	8	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_3	35.7371355475345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-26	True	NA	14	True	AATAAA	-14	NA	44141904	44162476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_41419.known	chr17	+	2725	10	FSM	ENSG00000125319.15	ENST00000319977.8	2725	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	38.746405647715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-25	True	NA	14	True	AATAAA	-14	NA	44141905	44162476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154552_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_41421.known	chr17	-	916	3	FSM	ENSG00000267080.7	ENST00000588785.6	916	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	6.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	2	True	NA	-14	True	AATAAA	-6	NA	44186707	44175967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44176643_44181622_44181721_44186564
transcript_41423.known	chr17	-	4795	21	FSM	ENSG00000108312.15	ENST00000436088.6	4795	21	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_20	88.279938264591	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-1	True	NA	-12	True	AATAAA	-13	NA	44219675	44205039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_41424.known	chr17	-	4997	21	FSM	ENSG00000108312.15	ENST00000302904.8	4997	21	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_20	99.1516389173674	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	476	False	NA	-5	True	AATAAA	-20	NA	44221626	44205032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
transcript_41427.known	chr17	-	2683	20	FSM	ENSG00000108312.15	ENST00000393606.7	2683	20	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_19	77.2329641275177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATACGG	2352	False	NA	NA	False	NA	NA	NA	44219750	44207115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_4143.known	chr1	+	3507	9	FSM	ENSG00000162607.13	ENST00000371146.5	3507	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	95.0259832887827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	NA	False	NA	84	True	TATAAA	-24	NA	62436303	62451802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_41439.nic	chr17	+	2772	4	NIC	ENSG00000168591.16	novel	1580	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	43	junction_1	33.008416435139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	-23	True	NA	15	True	AATAAA	-21	NA	44186958	44191730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44187744_44187906_44188010_44188934_44189589_44190500
transcript_4144.known	chr1	+	3602	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	24.9899979991996	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGTGTATATATATA	-27	True	NA	86	True	TATAAA	-26	NA	62437048	62451804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_41441.nic	chr17	+	2080	4	NIC	ENSG00000168591.16	novel	1191	3	NA	NA	-3	0	intron_retention	FALSE	canonical	2	8	junction_3	47.7865624998865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	-32	True	NA	-24	True	GGGGCT	-13	NA	44187202	44191691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44187744_44189021_44189589_44190500_44190887_44191105
transcript_41443.known	chr17	+	2202	4	FSM	ENSG00000168591.16	ENST00000538716.7	2202	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	48.3321838943783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGCGTGAGCCCCAC	-10	True	NA	NA	False	AATAAA	-14	NA	44186971	44191929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187110_44187675_44187744_44189021_44189589_44190500
transcript_41452.known	chr17	+	1569	3	FSM	ENSG00000168591.16	ENST00000590235.5	1569	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTTCTGTGACAGAGA	15	False	NA	16	True	AATAAA	-22	NA	44187049	44191731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187110_44189021_44189300_44190500
transcript_41453.known	chr17	+	1837	3	FSM	ENSG00000168591.16	ENST00000589184.5	1837	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	40	True	NA	-4	True	AATAAA	-2	NA	44187274	44191711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187744_44188934_44189092_44190500
transcript_41454.known	chr17	+	2418	3	FSM	ENSG00000168591.16	ENST00000319511.6	2418	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	-29	True	NA	11	True	AATAAA	-17	NA	44187205	44191726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187744_44188934_44189589_44190500
transcript_41457.nic	chr17	+	2012	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	11	0	intron_retention	FALSE	canonical	3	32	junction_1	41	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	-18	True	NA	15	True	AATAAA	-21	NA	44187216	44191730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44187432_44189021_44189589_44190500
transcript_41458.known	chr17	+	1918	3	FSM	ENSG00000168591.16	ENST00000589785.1	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	47	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTGTGGTCCTGCAG	27	True	NA	-3	True	AATAAA	-3	NA	44187261	44191712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187401_44189021_44189589_44190500
transcript_4146.nic	chr1	+	1488	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-407	6964	338	1520	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTAAAAAATGTGGC	-9	True	NA	NA	False	AAGAAA	-21	NA	62436641	62444840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_41461.known	chr17	+	1505	2	FSM	ENSG00000168591.16	ENST00000589856.1	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	419	False	NA	NA	False	NA	NA	NA	44187653	44190349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44187744_44188934
transcript_41462.nic	chr17	-	2623	2	ISM	ENSG00000087152.16	ENST00000591295.5	3017	7	1521	0	761	0	3prime_fragment	FALSE	canonical	3	182	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	5652	False	NA	-16	True	AATAAA	-19	NA	44194532	44191804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_44194412_44194516
transcript_41463.known	chr17	-	3010	20	FSM	ENSG00000108312.15	ENST00000527034.5	3010	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.753831045118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	20	True	NA	NA	False	NA	NA	NA	44220854	44206593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44207368_44207453_44207598_44207702_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_41464.known	chr17	+	2005	11	FSM	ENSG00000108309.14	ENST00000426726.8	2005	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5.77581163127746	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	0	True	NA	13	True	AATAAA	-15	NA	44308600	44318670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44318095
transcript_4147.nic	chr1	+	1626	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-407	6826	338	1658	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATGGGAAAAGAAAAAG	-9	True	NA	13	True	TTTAAA	-16	NA	62436641	62444978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_41470.known	chr17	-	1542	12	FSM	ENSG00000013306.16	ENST00000590194.5	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	669.995263335915	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGAACTTCTGCCTG	1	True	NA	NA	False	NA	NA	NA	44324809	44319641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323591_44324710
transcript_41471.known	chr17	-	1581	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_8	501.50864959623	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	-13	True	NA	NA	False	NA	NA	NA	44324823	44319627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
transcript_41478.known	chr17	+	2130	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	125.616700942015	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	-1	True	NA	30	True	AATAAA	-19	NA	44345301	44353106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_41479.nic	chr17	+	2401	13	NIC	ENSG00000030582.18	novel	2130	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_1	264.429298994394	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	-1	True	NA	30	True	AATAAA	-19	NA	44345301	44353106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_4148.nic	chr1	+	1537	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-206	6714	-206	1770	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCTACAAGTGATACA	87	False	NA	NA	False	NA	NA	NA	62436842	62445090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_4149.known	chr1	-	6985	49	FSM	ENSG00000116641.18	ENST00000454575.6	6985	49	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_26	25.2479286141568	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGAACTTTACTTAGTA	81	True	NA	NA	False	AAAACA	-12	NA	62688275	62454829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477835_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513470_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62544946_62545040_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_4150.known	chr1	-	122	2	FSM	ENSG00000116641.18	ENST00000636635.1	122	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCACCTTCGGTGTGCA	74	True	NA	NA	False	AATGAA	-16	NA	62688282	62687590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_62687657_62688226
transcript_41502.nic	chr17	-	448	2	ISM	ENSG00000005961.19	ENST00000648408.1	2618	25	10478	0	1322	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	1314	False	NA	-35	True	AATAAA	-17	NA	44374862	44372179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_44372424_44374658
transcript_41503.known	chr17	-	4713	9	FSM	ENSG00000186566.13	ENST00000587228.5	4713	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	50.3039200758748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTTGCTTTCAGT	-10	True	NA	NA	False	NA	NA	NA	44503404	44397415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44467096_44467115_44474828_44474904_44503325
transcript_41504.known	chr17	-	6832	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	15.7997675002268	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCAGAGTCTGTCGTAA	-12	True	NA	-4	True	AATAAA	-18	NA	44503406	44395280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_41507.known	chr17	-	650	3	FSM	ENSG00000186566.13	ENST00000592154.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGGCGCCTGTAGTC	172	False	NA	NA	False	NA	NA	NA	44503430	44473289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44473760_44474828_44474904_44503325
transcript_41508.known	chr17	-	2067	5	FSM	ENSG00000180329.14	ENST00000588210.1	2067	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	122.7202102345	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAACCACCTTTAAA	9	True	NA	-52	True	NA	NA	NA	44689763	44677482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44679044_44680584_44680653_44682002_44682139_44683871_44683960_44689549
transcript_41511.known	chr17	-	2058	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	138.843637072628	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-7	True	NA	-9	True	AATAAA	-40	NA	44689779	44677439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
transcript_41512.nic	chr17	-	329	2	ISM	ENSG00000180329.14	ENST00000592333.1	692	3	-49	2145	-15	-2145	5prime_fragment	FALSE	canonical	3	297	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTAGAGTCAGAGTTTC	-22	True	NA	NA	False	NA	NA	NA	44689794	44683875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_44683960_44689549
transcript_41513.known	chr17	-	692	3	FSM	ENSG00000180329.14	ENST00000592333.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATACAATATAGCTGTA	126	False	NA	NA	False	AAAACA	-38	NA	44689745	44681730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44682139_44683871_44683960_44689549
transcript_41515.nic	chr17	+	3487	13	ISM	ENSG00000161692.18	ENST00000393547.6	1810	15	-3	1717	-3	308	5prime_fragment	FALSE	canonical	3	13	junction_5	14.613540144522	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	NA	False	NA	15	True	AATAAA	-23	NA	44708604	44750547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_41518.nic	chr17	+	1486	12	ISM	ENSG00000161692.18	ENST00000393547.6	1810	15	-3	4543	-3	-1678	5prime_fragment	FALSE	canonical	3	13	junction_5	15.0711809712367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACTAGACCCAGACTA	NA	False	NA	11	True	AATAAA	-28	NA	44708604	44747721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390
transcript_41520.known	chr17	+	2998	12	FSM	ENSG00000161692.18	ENST00000526924.5	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	12.5993571920512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCACTTTTTCTT	7	True	NA	NA	False	NA	NA	NA	44708697	44750239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_41526.known	chr17	+	836	5	FSM	ENSG00000161692.18	ENST00000528766.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	5.3851648071345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACCTCCAACTCTG	10	True	NA	NA	False	NA	NA	NA	44708655	44731218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_41529.known	chr17	+	933	5	FSM	ENSG00000161692.18	ENST00000532789.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	21.821720830402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGCGAAACCCCATCT	171	False	NA	NA	False	NA	NA	NA	44708861	44731422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44708939_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_41532.nic	chr17	-	2637	4	NIC	ENSG00000182963.11	novel	586	3	NA	NA	-43	8	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	85.0267931628352	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTAAGGAAATTTTTT	201	False	NA	NA	False	NA	NA	NA	44830859	44803025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_44804115_44804587_44805838_44807393_44807470_44830637
transcript_41536.known	chr17	-	478	3	FSM	ENSG00000182963.11	ENST00000586267.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	93.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCATGTACGCTTCTG	1366	False	NA	NA	False	NA	NA	NA	44829694	44805607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44805838_44807393_44807470_44829522
transcript_41537.known	chr17	-	586	3	FSM	ENSG00000182963.11	ENST00000591424.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	79.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGAAGCAGACAAGAAGG	-5	True	NA	NA	False	NA	NA	NA	44830816	44805506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44805838_44807393_44807470_44830637
transcript_41538.known	chr17	-	4326	28	FSM	ENSG00000108883.13	ENST00000426333.7	4326	28	0	0	0	0	multi-exon	TRUE	canonical	3	817	junction_16	99.9256513737545	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCTGTTGCATGAT	-21	True	NA	NA	False	NA	NA	NA	44899445	44849947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_41539.known	chr17	-	3364	28	FSM	ENSG00000108883.13	ENST00000592576.5	3364	28	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_23	208.392673030602	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTACATTCTGAATATA	-7	True	NA	-62	True	NA	NA	NA	44899431	44850865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883129_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_41543.known	chr17	-	3045	27	FSM	ENSG00000108883.13	ENST00000402521.7	3045	27	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_26	211.356257195337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGTGAGAGAGGAGCAT	-21	True	NA	NA	False	NA	NA	NA	44899445	44851119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44899368
transcript_41554.known	chr17	+	921	4	FSM	ENSG00000167131.17	ENST00000410006.6	921	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.0921211313239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTGCAGGACCATAATA	-9	True	NA	NA	False	NA	NA	NA	44899711	44902882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44899830_44900989_44901142_44901519_44901653_44902364
transcript_41558.known	chr17	+	849	4	FSM	ENSG00000167131.17	ENST00000357776.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.0979218029257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCAGGTTGACTGATGC	-5	True	NA	NA	False	NA	NA	NA	44899715	44902800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44899844_44900989_44901142_44901519_44901653_44902364
transcript_4156.nnic	chr1	+	1809	11	NNC	ENSG00000125703.15	novel	464	5	NA	NA	-308	-1144	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	84.7212488104372	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGCATTCCTATTTC	NA	False	NA	4	True	AATAAA	-14	NA	62783823	62864369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_62783978_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_41563.known	chr17	+	3397	4	FSM	ENSG00000214447.5	ENST00000331733.4	3397	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6.84754619472471	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTGCTTTGCTTTCT	7	True	NA	10	True	NA	NA	NA	44899773	44905390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44899860_44900989_44901142_44901519_44901653_44902364
transcript_41569.known	chr17	+	1028	1	FSM	ENSG00000267334.1	ENST00000591013.1	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGATGGCTTACAGCAT	18	False	NA	NA	False	AATAAA	-10	NA	44947911	44948939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_44947900_44948900
transcript_4157.known	chr1	+	2890	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	48.0141645767163	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTCTTTAGTCTAAA	-16	True	NA	10	True	AATAAA	-15	NA	62784134	62865513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_41572.known	chr17	+	4881	12	FSM	ENSG00000136448.13	ENST00000258960.7	4881	12	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_10	35.6611694741558	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTCCTGGTATTCCT	2	True	NA	NA	False	AATAAA	-19	NA	45061316	45109016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_41573.known	chr17	+	1939	12	FSM	ENSG00000136448.13	ENST00000592654.3	1939	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.77227684177	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAATATCTTTCATG	364	False	NA	23	True	AATAAA	-30	NA	45061678	45105986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45061911_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_41575.known	chr17	+	1374	11	FSM	ENSG00000136448.13	ENST00000590114.6	1374	11	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	193.726637301121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCACCAGTGCGATTCT	15	True	NA	NA	False	NA	NA	NA	45061329	45105639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_41577.known	chr17	+	1328	8	FSM	ENSG00000136448.13	ENST00000590310.2	1328	8	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_5	21.2929038672991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTAGTGAACCTTCA	-14	True	NA	NA	False	AGTAAA	-19	NA	45061300	45099819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404
transcript_41580.nic	chr17	+	237	2	ISM	ENSG00000136448.13	ENST00000585561.5	807	7	-53	15544	10	-15544	5prime_fragment	FALSE	canonical	3	631	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAAAAAGGCAGTG	356	False	NA	55	True	AAAAAG	-21	NA	45061280	45081700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_45061461_45081643
transcript_41583.known	chr17	-	990	5	FSM	ENSG00000172992.13	ENST00000452796.7	2027	5	70	967	5	-569	multi-exon	FALSE	canonical	3	58	junction_4	48.0175749075273	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	11	True	NA	NA	False	NA	NA	NA	45051610	45024310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051552
transcript_41584.known	chr17	-	2122	5	FSM	ENSG00000172992.13	ENST00000310604.9	2112	5	-8	-2	4	0	multi-exon	FALSE	canonical	1	2	junction_4	71.306994748061	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGATTCCCAGACTTG	7	True	NA	-16	True	AATAAA	-28	NA	45061109	45023345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035003_45060887
transcript_41586.known	chr17	+	1579	10	FSM	ENSG00000181513.15	ENST00000586346.5	1579	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	11.159892915102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGATCGGGTCTCAGCCCC	-32	True	NA	NA	False	NA	NA	NA	45135646	45143850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_41587.known	chr17	+	1827	10	FSM	ENSG00000181513.15	ENST00000321854.13	1827	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	10.2415276638248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	8	True	NA	12	True	AATAAA	-13	NA	45135686	45144176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_41590.known	chr17	+	1684	9	FSM	ENSG00000181513.15	ENST00000592162.5	1684	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	17.5708387676855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	11	True	NA	12	True	AATAAA	-13	NA	45135689	45144176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45143442
transcript_41591.known	chr17	+	1453	10	FSM	ENSG00000181513.15	ENST00000376955.8	1453	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.1240266435113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGACCTTGCTTTCCT	15	True	NA	6	True	NA	NA	NA	45135693	45142959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137922_45137989_45139020_45139161_45142582
transcript_41592.known	chr17	+	1528	4	FSM	ENSG00000168517.11	ENST00000307275.7	1528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.3306450738701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTAGGATTGATTTCAC	-8	True	NA	29	True	ATTAAA	-25	NA	45160699	45170040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45160944_45162487_45162636_45162749_45162860_45169014
transcript_41593.nnic	chr17	+	1453	4	NIC	ENSG00000168517.11	novel	1302	3	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40.9959347578106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-3	True	NA	24	True	ATTAAA	-20	NA	45161074	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_45161249_45162487_45162636_45162749_45162860_45169014
transcript_41594.known	chr17	+	1436	4	FSM	ENSG00000168517.11	ENST00000589230.6	1436	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	33.4697209761633	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-23	True	NA	24	True	ATTAAA	-20	NA	45161874	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45162032_45162487_45162636_45162749_45162860_45169014
transcript_41595.known	chr17	+	1302	3	FSM	ENSG00000168517.11	ENST00000593138.6	1302	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	0	True	NA	24	True	ATTAAA	-20	NA	45161077	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45161249_45162749_45162860_45169014
transcript_41596.known	chr17	+	1176	3	FSM	ENSG00000168517.11	ENST00000591576.5	1176	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	41	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-3	True	NA	24	True	ATTAAA	-20	NA	45161894	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45161940_45162749_45162860_45169014
transcript_41597.known	chr17	+	1246	3	FSM	ENSG00000168517.11	ENST00000592695.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	26.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	19	True	NA	24	True	ATTAAA	-20	NA	45161916	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45162032_45162749_45162860_45169014
transcript_41598.known	chr17	+	3625	1	FSM	ENSG00000186834.4	ENST00000332499.4	3625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCTTCGTGTTTTTT	-1	True	NA	13	True	ATTAAA	-15	NA	45148474	45152099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45148500_45152100
transcript_41599.known	chr17	+	1345	3	FSM	ENSG00000168517.11	ENST00000585340.2	1345	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	22	False	NA	24	True	ATTAAA	-20	NA	45160729	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45160944_45162749_45162860_45169014
transcript_416.known	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	481.312788111847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-5	True	NA	0	True	NA	NA	NA	2194748	2191900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
transcript_41600.known	chr17	+	1323	4	FSM	ENSG00000168517.11	ENST00000591070.6	1323	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.9959347578106	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-2	True	NA	24	True	ATTAAA	-20	NA	45161895	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45161940_45162487_45162636_45162749_45162860_45169014
transcript_41601.known	chr17	+	1438	3	FSM	ENSG00000168517.11	ENST00000586681.6	1438	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	47.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	16	False	NA	24	True	ATTAAA	-20	NA	45161093	45170035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45161401_45162749_45162860_45169014
transcript_41602.known	chr17	+	2175	4	FSM	ENSG00000267278.6	ENST00000655903.1	2175	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	6.18241233033047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	4	True	NA	-12	True	NA	NA	NA	45247934	45269814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45248004_45255134_45255219_45267112_45267329_45268008
transcript_41603.known	chr17	+	2090	3	FSM	ENSG00000267278.6	ENST00000590100.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	5	True	NA	-12	True	NA	NA	NA	45247935	45269814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45248004_45267112_45267329_45268008
transcript_41604.nnic	chr17	+	493	3	NNC	ENSG00000267278.6	novel	488	3	NA	NA	-2	-7576	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTATGTTGTTGA	2	True	NA	NA	False	GATAAA	-24	NA	45247932	45259890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_45248004_45255134_45255219_45259552
transcript_41605.known	chr17	+	2296	3	FSM	ENSG00000267278.6	ENST00000586450.6	2296	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAATGTAAGGAAGTGT	7046	False	NA	-2	True	AATAAA	-2	NA	45262079	45269824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45262344_45267112_45267329_45268008
transcript_41606.nic	chr17	-	587	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-11	2088	-11	-7	5prime_fragment	FALSE	canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTCCTCGGGGCTGGGG	-7	True	NA	-7	True	TATAAA	-14	NA	45248350	45247273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_41607.nic	chr17	-	499	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-11	2176	-11	19	5prime_fragment	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCGGGTGGCTGCGG	-7	True	NA	3	True	AGTAAA	-19	NA	45248350	45247361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_41608.known	chr17	-	393	2	FSM	ENSG00000233483.3	ENST00000589518.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	500	False	NA	0	True	TATAAA	-21	NA	45247843	45247266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45247517_45247700
transcript_41610.known	chr17	-	3628	17	FSM	ENSG00000159314.12	ENST00000376922.6	3628	17	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_11	7.9912061042123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	-2	True	NA	-8	True	AATAAA	-18	NA	45425631	45393908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45425563
transcript_4162.known	chr1	+	2944	11	FSM	ENSG00000125703.15	ENST00000317868.9	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	48.0141645767163	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTTAGTCTAAATAC	-19	True	NA	13	True	AATAAA	-18	NA	62784131	62865516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_62784274_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_41642.known	chr17	+	546	4	FSM	ENSG00000204650.14	ENST00000585118.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	56.3461523876199	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGAAGGCCTGAACTGG	-12	True	NA	NA	False	NA	NA	NA	45620327	45636394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45636282
transcript_41643.known	chr17	+	9678	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_3	96.8813707582629	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTGCCAGAGAATTT	0	True	NA	NA	False	AATAAA	-19	NA	45620339	45655156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
transcript_41645.known	chr17	+	2609	4	FSM	ENSG00000204650.14	ENST00000455565.5	2609	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	105.837401496614	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTAGCCTAGAGCTCGT	270	False	NA	13	True	AATAAA	-23	NA	45620609	45637959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45621153_45621907_45622042_45629903_45630159_45636282
transcript_41648.known	chr17	+	1353	10	FSM	ENSG00000186868.17	ENST00000535772.6	1353	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.8588178511708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAATGACC	-8	True	NA	NA	False	NA	NA	NA	45894550	46024225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45894687_45962320_45962471_45971858_45971946_45978374_45978441_45987039_45987096_45991459_45991587_45996398_45996665_46014242_46014325_46018617_46018731_46023955
transcript_41649.known	chr17	+	1107	9	FSM	ENSG00000186868.17	ENST00000334239.12	1107	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.49687304442977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGTCAATAATTGTGGAG	15	False	NA	NA	False	NA	NA	NA	45894667	46024183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_45894687_45962320_45962471_45978374_45978441_45987039_45987096_45991459_45991587_45996398_45996665_46014242_46014325_46018617_46018731_46023955
transcript_41651.known	chr17	-	1717	5	FSM	ENSG00000120071.15	ENST00000639356.1	1717	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	55.8166641783616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTTAGTGTGTGTCA	-4	True	NA	NA	False	AATAAA	-21	NA	46225367	46148124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46148240_46152903_46152967_46170854_46172233_46223670_46223805_46225340
transcript_41654.nic	chr17	-	2136	3	ISM	ENSG00000120071.15	ENST00000574655.6	1681	5	-15	17373	3	0	5prime_fragment	FALSE	canonical	3	105	junction_1	18	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTCCTATTAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-38	NA	46225386	46170276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_46172233_46223670_46223805_46225340
transcript_41655.known	chr17	-	5147	16	FSM	ENSG00000120071.15	ENST00000574590.6	5147	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	26.6094385927667	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	NA	False	NA	-14	True	AATAAA	-17	NA	46225389	46029915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034283_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
transcript_41657.known	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.974115859463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	27	False	NA	NA	False	NA	NA	NA	46361718	46330452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_41659.known	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	24.0878023535196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
transcript_41661.known	chr17	+	5669	15	FSM	ENSG00000238083.8	ENST00000576629.5	5669	15	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	37.1920690470428	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGTGATTCCGATG	NA	False	NA	NA	False	AATAAA	-22	NA	46511510	46555650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46511609_46512315_46515322_46517361_46517434_46520211_46520284_46523083_46523156_46523803_46523885_46540175_46540248_46540806_46540882_46546254_46546374_46548311_46549844_46550414_46550520_46553399_46553450_46555151_46555207_46555284_46555425_46555530
transcript_41667.nnic	chr17	-	2178	6	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-19	1593	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.4476291326291	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCATCCAGTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	46579710	46527091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46528556_46528797_46528860_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41672.nnic	chr17	-	1947	5	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-19	1041	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	63.5703350628263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTTTTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	46579710	46547165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_46548461_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41673.known	chr17	-	581	4	FSM	ENSG00000185829.18	ENST00000573185.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	79.5165950534157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTGCCATTCAGAGAGG	0	True	NA	NA	False	NA	NA	NA	46579651	46548206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46548461_46570758_46570870_46576174_46576340_46579600
transcript_41674.known	chr17	-	5242	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	23.6220236220354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46579691	46552755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
transcript_41677.known	chr17	+	3983	21	FSM	ENSG00000073969.18	ENST00000398238.8	3983	21	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_18	34.284690460904	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	17	True	AATAAA	-20	NA	46590668	46757464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
transcript_41679.nic	chr17	+	2150	15	ISM	ENSG00000073969.18	ENST00000398238.8	3983	21	34	43162	34	-37281	5prime_fragment	FALSE	canonical	3	202	junction_13	31.9965718827017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGATTTTTTAAAGTTC	NA	False	NA	30	True	AATAAA	-14	NA	46590702	46714302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852
transcript_41684.known	chr17	-	3287	5	FSM	ENSG00000108379.10	ENST00000225512.6	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.78564169540279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACATTGTACACTGTG	-3	True	NA	-12	True	ATTAAA	-23	NA	46818692	46762505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46764622_46768311_46768800_46769782_46770049_46773667_46773910_46818517
transcript_41685.known	chr17	-	734	3	FSM	ENSG00000108379.10	ENST00000572508.1	734	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATGCCATGTACT	3	True	NA	NA	False	AATAAA	-16	NA	46833058	46830594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_46830919_46831447_46831563_46832763
transcript_41686.known	chr17	+	1245	7	FSM	ENSG00000108433.17	ENST00000225567.9	1245	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_6	103.162897077066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATGGACATTTACTT	7027	False	NA	NA	False	TTTAAA	-36	NA	46923119	46941143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46940554
transcript_41688.known	chr17	+	1115	7	FSM	ENSG00000108433.17	ENST00000573224.2	1115	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	101.481799134404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	-18	True	NA	26	True	ATTAAA	-19	NA	46923127	46967000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533
transcript_41689.known	chr17	+	2683	6	FSM	ENSG00000108433.17	ENST00000638374.1	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	110.362312407814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCAGAGGTGGTTTT	18	True	NA	NA	False	NA	NA	NA	46923163	46940779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_41695.known	chr17	+	3574	6	FSM	ENSG00000108433.17	ENST00000638216.1	3574	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	108.558924091942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGTCACCCAGGC	0	True	NA	NA	False	TTTAAA	-42	NA	46923145	46941600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_41696.known	chr17	+	3929	6	FSM	ENSG00000108433.17	ENST00000640443.1	3929	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.535150064324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCACCCAGGCTGGAGT	14	True	NA	NA	False	NA	NA	NA	46923159	46941606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923633_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_41697.known	chr17	+	885	5	FSM	ENSG00000108433.17	ENST00000639031.1	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	122.569113156619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTGTATTTTAGT	52	False	NA	NA	False	NA	NA	NA	46923197	46935586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028
transcript_417.nnic	chr1	+	955	8	NNC	ENSG00000157916.20	novel	695	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	442.150496126025	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGTCAAATTTTCTTTT	-3	True	NA	25	True	CATAAA	-14	NA	2391841	2403216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_2391959_2393207_2393356_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_41701.known	chr17	+	3808	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	143.398919103318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	-8	True	NA	8	True	AATAAA	-20	NA	46923137	46942019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
transcript_41703.known	chr17	+	2190	5	FSM	ENSG00000108433.17	ENST00000640269.1	2190	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	120.471988445447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGATCTCTGATGGCA	14	True	NA	-6	True	AATACA	-8	NA	46923159	46936801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_41705.known	chr17	+	1444	4	FSM	ENSG00000108433.17	ENST00000575949.6	1444	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	13.4742552876052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTGGTCATTCTAC	7	True	NA	19	True	AATAAA	-21	NA	46923152	46933267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066
transcript_41708.known	chr17	+	2679	3	FSM	ENSG00000108433.17	ENST00000640709.1	2679	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTTTTTTTTTTTGGA	-8	True	NA	NA	False	AAGAAA	-11	NA	46923137	46933628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931098
transcript_41709.known	chr17	+	1891	6	FSM	ENSG00000108433.17	ENST00000576910.7	1891	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	106.411277597819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCATGGCAAGACATAA	-18	True	NA	98	True	NA	NA	NA	46923127	46939953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_46923222_46929519_46929585_46931104_46931208_46932066_46932200_46935028_46935170_46938598
transcript_41710.nic	chr17	-	3074	19	NIC	ENSG00000004897.12	novel	2579	19	NA	NA	-43	175	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	39.9974150399316	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTGCCAAGGAATGTA	-5	True	NA	-10	True	AATAAA	-22	NA	47189338	47120434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47121018_47122443_47122537_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41711.known	chr17	-	2579	19	FSM	ENSG00000004897.12	ENST00000527547.5	2579	19	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	23.1882393562867	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTCTGTATACTGAGT	109	False	NA	NA	False	NA	NA	NA	47189224	47120879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41712.known	chr17	-	3177	19	FSM	ENSG00000004897.12	ENST00000531206.5	3177	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	39.0654721091543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGATCATTGTTGTCTT	157	False	NA	-5	True	NA	NA	NA	47189176	47120254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41714.known	chr17	-	2570	18	FSM	ENSG00000004897.12	ENST00000533415.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	42.0786872056985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGCAATATTTAGCTG	30	True	NA	NA	False	AATGAA	-2	NA	47189251	47120770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47181561_47181638_47189145
transcript_41719.nic	chr17	-	1345	11	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-114	21548	-43	0	5prime_fragment	FALSE	canonical	3	100	junction_3	21.822236365689	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAATGAAGTT	-5	True	NA	NA	False	NA	NA	NA	47189338	47142427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41721.nic	chr17	-	1363	11	ISM	ENSG00000004897.12	ENST00000531206.5	3177	19	-162	22173	-43	0	5prime_fragment	FALSE	canonical	3	21	junction_3	41.1149607807183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAATGAAGTT	-5	True	NA	NA	False	NA	NA	NA	47189338	47142427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41722.nic	chr17	-	1197	10	ISM	ENSG00000004897.12	ENST00000533415.5	2570	18	-87	21657	-43	0	5prime_fragment	FALSE	canonical	3	9	junction_8	45.1904064985719	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAATGAAGTT	-5	True	NA	NA	False	NA	NA	NA	47189338	47142427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47181561_47181638_47189145
transcript_41723.nic	chr17	-	1370	10	NIC	ENSG00000004897.12	novel	5830	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	100	junction_3	21.3593591248011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAATGAAGTT	23	True	NA	NA	False	NA	NA	NA	47189258	47142427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_41731.known	chr17	+	850	8	FSM	ENSG00000198336.9	ENST00000572316.5	850	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	9.34595841931207	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCTCTGGGATTCTG	-21	True	NA	18	True	AATAAA	-18	NA	47209034	47223658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47209092_47209388_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_41732.known	chr17	+	907	8	FSM	ENSG00000198336.9	ENST00000354968.5	907	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.71779788708135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTCTCTGTTTTGTTTG	6	True	NA	38	True	AATAAA	-38	NA	47209061	47223678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47209156_47209388_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_41734.known	chr17	+	855	7	FSM	ENSG00000198336.9	ENST00000393450.5	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	4.29793231940921	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTCTGTTTTGTTTGT	-1	True	NA	39	True	AATAAA	-39	NA	47209347	47223679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_41740.known	chr17	-	473	4	FSM	ENSG00000228782.8	ENST00000573318.1	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	50.6776303927307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAACTCCCTACCTT	32	False	NA	NA	False	AAAAAG	-41	NA	47492459	47482991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47483091_47490165_47490296_47491014_47491193_47492393
transcript_41741.nnic	chr17	-	722	4	FSM	ENSG00000228782.8	ENST00000691039.1	736	4	9	5	-6	-5	multi-exon	FALSE	canonical	3	22	junction_1	64.8913622055269	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTCCTGCTTAGAACT	8	False	NA	-5	True	AATAAA	-16	NA	47492483	47488631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47488956_47490165_47490296_47491014_47491193_47492393
transcript_41746.known	chr17	+	4309	23	FSM	ENSG00000141279.17	ENST00000322157.9	4309	23	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_7	69.660807482928	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATTCACTTTATTC	1	True	NA	32	True	AATAAA	-20	NA	47531107	47623276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
transcript_41753.known	chr17	-	442	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	29	315	-4	-315	multi-exon	FALSE	canonical	3	14	junction_1	7.78888096369861	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCAGAATATTTTCACA	6	True	NA	NA	False	NA	NA	NA	47649420	47621841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
transcript_41755.nnic	chr17	-	788	3	NIC	ENSG00000263766.6	novel	786	4	NA	NA	-86	-3	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCCTTTCTTTTAGGCT	587	False	NA	-21	True	AATAAA	-12	NA	47649535	47621529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47622088_47636511_47636602_47649395
transcript_41756.known	chr17	+	6182	23	FSM	ENSG00000108424.11	ENST00000583648.6	6182	23	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	311.652328009465	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	43	False	NA	24	True	AATAAA	-24	NA	47649494	47685505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47649878_47650177_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_41757.known	chr17	+	6058	22	FSM	ENSG00000108424.11	ENST00000290158.9	6058	22	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	176.679732542124	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	6	True	NA	24	True	AATAAA	-24	NA	47649918	47685505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_41765.known	chr17	-	1622	6	FSM	ENSG00000159111.13	ENST00000414011.1	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	346.027397759195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTTATAATAAAATGAA	-6	True	NA	-51	True	NA	NA	NA	47831534	47823489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138_47829237_47831459
transcript_41767.known	chr17	-	1576	5	FSM	ENSG00000159111.13	ENST00000421763.5	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	308.842192713366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACCCAGAAGTGGGTCC	-2	True	NA	NA	False	NA	NA	NA	47831530	47823582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831310
transcript_41768.known	chr17	-	1749	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	77.5258021564434	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACGTGTCTCTGGTGGT	-13	True	NA	-3	True	ATTAAA	-25	NA	47831541	47823271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
transcript_41771.known	chr17	+	1885	8	FSM	ENSG00000141294.10	ENST00000269025.9	1885	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.51185789203691	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAGCTGGCCGCTCAGA	18	True	NA	NA	False	AATAAA	-20	NA	47831669	47837719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47832000_47832099_47832206_47834424_47834534_47835352_47835400_47835665_47835776_47836032_47836103_47836332_47836476_47836749
transcript_41773.nic	chr17	-	1507	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_7	99.8570406702931	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	14	True	NA	-15	True	AATAAA	-15	NA	47841261	47837691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_41774.known	chr17	-	1496	8	FSM	ENSG00000141295.14	ENST00000290216.14	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_7	54.79162754454	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	2	True	NA	-15	True	AATAAA	-15	NA	47841273	47837691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_41775.nic	chr17	-	1413	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	130.883652960348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	14	True	NA	-43	True	NA	NA	NA	47841261	47837719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_41776.nic	chr17	-	1403	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	106.408531190897	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	1	True	NA	-43	True	NA	NA	NA	47841274	47837719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_41780.known	chr17	-	1779	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	48.5168928198096	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-14	True	NA	-15	True	AATAAA	-15	NA	47841289	47837691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_41783.known	chr17	-	952	6	FSM	ENSG00000141295.14	ENST00000579856.5	952	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	134.840646690825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGACACCAGGCAGCCC	10	True	NA	NA	False	NA	NA	NA	47841265	47838312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840669_47840844_47841207
transcript_41793.known	chr17	-	1745	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	42.3034671549902	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	9991	False	NA	-30	True	NA	NA	NA	47841173	47837706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_41796.known	chr17	-	522	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	25	10	4	0	multi-exon	FALSE	canonical	3	19	junction_2	2	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCATAACTGGTGC	446	False	NA	NA	False	ATTAAA	-43	NA	47895812	47891228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47891582_47893899_47893959_47895702
transcript_41797.known	chr17	-	374	2	FSM	ENSG00000264920.3	ENST00000577279.2	470	2	47	49	23	-46	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCTTCA	15	True	NA	NA	False	NA	NA	NA	47895769	47891274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47891582_47895702
transcript_41798.known	chr17	+	3026	7	FSM	ENSG00000167182.16	ENST00000376741.5	3026	7	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	35.3270434653114	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTTCGGCTTCCTT	-1	True	NA	12	True	AATAAA	-28	NA	47896235	47928957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47896294_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723
transcript_41804.known	chr17	+	1834	14	FSM	ENSG00000108465.15	ENST00000338399.9	1834	14	0	0	0	0	multi-exon	FALSE	canonical	2	326	junction_5	107.10554436226	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	-4	True	NA	36	True	AATAAA	-26	NA	47971112	47981781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41812.known	chr17	+	2519	13	FSM	ENSG00000108465.15	ENST00000585163.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	2	351	junction_6	96.0538043667888	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	8	True	NA	23	True	AATAAA	-13	NA	47971124	47981768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41814.known	chr17	+	2609	13	FSM	ENSG00000108465.15	ENST00000580287.5	2609	13	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_12	164.288596851868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	10	True	NA	27	True	AATAAA	-17	NA	47971126	47981772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
transcript_41822.known	chr17	+	2759	12	FSM	ENSG00000108465.15	ENST00000584063.5	2759	12	0	0	0	0	multi-exon	FALSE	canonical	2	399	junction_4	82.9907890936107	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	23	False	NA	27	True	AATAAA	-17	NA	47971103	47981772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41824.nic	chr17	+	2831	12	NIC	ENSG00000108465.15	novel	2759	12	NA	NA	-1	0	intron_retention	FALSE	canonical	2	9	junction_3	174.970694122338	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	-6	True	NA	27	True	AATAAA	-17	NA	47971074	47981772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_47971153_47971361_47971408_47973518_47973694_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41830.nic	chr17	+	3135	11	NIC	ENSG00000108465.15	novel	2759	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	399	junction_3	86.9390591161418	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	NA	False	NA	27	True	AATAAA	-17	NA	47971007	47981772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_47971153_47971361_47971408_47973518_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41831.known	chr17	+	3417	7	FSM	ENSG00000108439.11	ENST00000642017.2	3417	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	2.98607881119482	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTCAACCCGGCCTG	-9	True	NA	30	True	AATAAA	-23	NA	47941570	47949308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_41833.known	chr17	-	1524	2	FSM	ENSG00000167183.3	ENST00000300557.3	1524	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTTCAAGCTTCAG	-26	True	NA	NA	False	AGTAAA	-20	NA	47957883	47951966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_47953264_47957656
transcript_41834.known	chr17	+	1957	13	FSM	ENSG00000108465.15	ENST00000580391.5	1957	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.943873106129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTATAGCGGACTTAATA	16	False	NA	-11	True	NA	NA	NA	47971155	47981734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_47971408_47973518_47973651_47973930_47974036_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_41835.nnic	chr17	-	694	2	NNC	ENSG00000263412.2	novel	566	2	NA	NA	238	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	7989	False	NA	-12	True	AATAAA	-18	NA	48047812	48046880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_48046971_48047208
transcript_41836.known	chr17	+	4839	6	FSM	ENSG00000082641.16	ENST00000362042.8	4839	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	94.0370139891734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGACTGGCCATTGCGT	-6	True	NA	28	True	AATAAA	-19	NA	48048358	48061545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057031_48057122_48057343_48057503_48058294
transcript_41837.known	chr17	+	4729	6	FSM	ENSG00000082641.16	ENST00000361665.7	4729	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	106.900701587969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAGTGCACTTTTTCC	408	False	NA	-8	True	AATAAA	-18	NA	48048772	48061480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48048865_48050606_48051629_48056418_48056599_48057031_48057122_48057343_48057503_48058294
transcript_41838.known	chr17	+	4672	5	FSM	ENSG00000082641.16	ENST00000357480.9	4672	5	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	38.8651514856176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	5	True	NA	-9	True	AATAAA	-17	NA	48048369	48061479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057343_48057503_48058294
transcript_41844.known	chr17	+	2172	4	FSM	ENSG00000082641.16	ENST00000536222.5	2172	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	111.547697819762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTTTGAAGCCCACCA	9	True	NA	NA	False	NA	NA	NA	48054709	48059653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48055151_48056385_48056599_48057343_48057503_48058294
transcript_41846.known	chr17	+	1998	4	FSM	ENSG00000082641.16	ENST00000582155.5	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	114.737381296013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGGCCAGACCATTTA	102	False	NA	NA	False	NA	NA	NA	48054674	48059833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48054762_48056385_48056599_48057343_48057503_48058294
transcript_41849.known	chr17	+	2051	4	FSM	ENSG00000082641.16	ENST00000583378.5	2051	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	124.340929169227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCCGACAGAGGGGAA	-9	True	NA	NA	False	NA	NA	NA	48054691	48059936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48054762_48056418_48056599_48057343_48057503_48058294
transcript_41851.known	chr17	+	583	4	FSM	ENSG00000082641.16	ENST00000580037.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	128.929782784618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTCCCTGGGGGGCTGCA	-14	True	NA	NA	False	NA	NA	NA	48055951	48058416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48056041_48056385_48056599_48057343_48057503_48058294
transcript_41854.known	chr17	-	578	5	FSM	ENSG00000108468.15	ENST00000402583.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.195241382095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGCTGACGTGGCATT	141	False	NA	NA	False	NA	NA	NA	48101302	48071498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48071580_48075005_48075101_48075988_48076179_48076864_48077042_48101267
transcript_41857.known	chr17	-	2422	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	251.1527174848	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTAAGTCTTACC	-14	True	NA	-7	True	AATAAA	-23	NA	48101198	48070051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
transcript_41858.known	chr17	-	2182	5	FSM	ENSG00000108468.15	ENST00000225603.9	2182	5	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_2	54.3938185826294	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGATTTCTGTCTTAAG	-35	True	NA	-14	True	AATAAA	-16	NA	48101478	48070058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48101267
transcript_41862.nic	chr17	-	568	3	ISM	ENSG00000108468.15	ENST00000495350.5	550	4	-209	1091	-18	-928	5prime_fragment	FALSE	canonical	3	638	junction_2	7	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGAAGAGGTAA	-53	True	NA	NA	False	NA	NA	NA	48101496	48076016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_48076179_48076864_48077042_48101267
transcript_41864.known	chr17	+	2733	8	FSM	ENSG00000002919.15	ENST00000393405.6	2733	8	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	57.7432741909022	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGGTATTCATCC	15	False	NA	10	True	AATAAA	-24	NA	48107557	48123074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107839_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41866.known	chr17	+	922	8	FSM	ENSG00000002919.15	ENST00000584335.5	922	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.0102032553912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGCCTTTGGACCCT	120	False	NA	NA	False	NA	NA	NA	48107893	48121458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107980_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41867.nic	chr17	+	2138	7	NIC	ENSG00000002919.15	novel	2733	8	NA	NA	-27	-329	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	54.0907159830183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGTTGCAATTTGTG	6711	False	NA	14	True	AATAAA	-15	NA	48107521	48122745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_48107597_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41868.known	chr17	+	1200	7	FSM	ENSG00000002919.15	ENST00000580219.5	1200	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	63.5837155951812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATCTCCTCAGGTGACC	6	True	NA	NA	False	NA	NA	NA	48107548	48121808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107597_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41870.known	chr17	+	2992	7	FSM	ENSG00000002919.15	ENST00000359238.7	2992	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	13.30935343617	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCTCAGTTAATCTA	-8	True	NA	NA	False	NA	NA	NA	48107765	48123601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107839_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41872.known	chr17	+	1282	7	FSM	ENSG00000002919.15	ENST00000582104.5	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	44.9172077889483	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTTATGTTGTATCC	14	True	NA	NA	False	NA	NA	NA	48107787	48121887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48107839_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_41878.known	chr17	-	682	3	FSM	ENSG00000141293.16	ENST00000579476.5	682	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTGATGATGTTGA	14	False	NA	-9	True	AATAAA	-19	NA	48162670	48133445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48133817_48137228_48137338_48162468
transcript_41879.known	chr17	-	382	2	FSM	ENSG00000159182.5	ENST00000290294.5	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGAAAGTTAACTGTG	-1	True	NA	NA	False	AATAAA	-20	NA	48722518	48721718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48721900_48722317
transcript_4188.known	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	272.422466033916	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
transcript_41884.known	chr17	+	3635	13	FSM	ENSG00000136436.15	ENST00000258947.8	3635	13	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	11.7008427996543	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTTTTTTGAGACAG	-2	True	NA	NA	False	AGTAAA	-5	NA	48831034	48865245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_41891.known	chr17	+	1396	12	FSM	ENSG00000136436.15	ENST00000508679.5	1396	12	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_1	38.0167427230783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGCTACCTTTAAGTCG	-2	True	NA	NA	False	NA	NA	NA	48831034	48863196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48831079_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_41896.known	chr17	+	598	5	FSM	ENSG00000159199.14	ENST00000355938.9	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	380.723899302368	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	NA	False	NA	38	True	ATTAAA	-18	NA	48892764	48895871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_41897.known	chr17	+	539	5	FSM	ENSG00000159199.14	ENST00000503641.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1071.53006840686	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	6	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895182_48895335_48895654
transcript_41898.known	chr17	+	646	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	1006.11704090528	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	-4	True	NA	38	True	ATTAAA	-18	NA	48892786	48895871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_41900.known	chr17	+	359	4	FSM	ENSG00000159199.14	ENST00000514808.5	359	4	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	439.360393703797	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCATCTCCCACTGTA	11	True	NA	NA	False	NA	NA	NA	48892801	48895349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155
transcript_41902.known	chr17	+	468	4	FSM	ENSG00000159199.14	ENST00000506855.1	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	1044.73962731816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	-1	True	NA	38	True	ATTAAA	-18	NA	48892816	48895871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48893457_48895155_48895335_48895654
transcript_41906.known	chr17	+	759	4	FSM	ENSG00000159199.14	ENST00000513781.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1287.00228783359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAACCCCTGTCTG	8	True	NA	28	True	ATTAAA	-8	NA	48892853	48895861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48893126_48894348_48894450_48895155_48895335_48895654
transcript_41909.known	chr17	+	2214	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	-2	True	NA	35	True	ATTAAA	-15	NA	48892766	48895868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48892841_48893408_48895335_48895654
transcript_4191.nnic	chr1	-	1268	3	FSM	ENSG00000230798.6	ENST00000686970.1	492	3	-782	6	6	0	multi-exon	FALSE	canonical	0	0	junction_1	516.5	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	6	True	NA	-53	True	AATAAA	-24	NA	63322447	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63321583
transcript_41914.known	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	534.014828197396	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	3	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_4192.nnic	chr1	-	1236	3	FSM	ENSG00000230798.6	ENST00000688951.1	1260	3	18	6	2	0	multi-exon	TRUE	canonical	0	0	junction_1	471	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-3	True	NA	-53	True	AATAAA	-24	NA	63322456	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63321624
transcript_41923.known	chr17	+	8796	15	FSM	ENSG00000159217.10	ENST00000290341.8	8796	15	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_10	103.841642584725	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	0	True	NA	23	True	AATAAA	-24	NA	48997384	49056145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043966_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
transcript_41925.known	chr17	+	1629	8	FSM	ENSG00000108798.9	ENST00000225941.6	1629	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.81725406168211	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGTGTGTGGTGTG	-2	True	NA	5	True	NA	NA	NA	49210706	49223225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49210842_49216530_49216699_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_4193.nic	chr1	-	1241	3	FSM	ENSG00000230798.6	ENST00000686286.1	1247	3	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	301.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	1247	False	NA	-53	True	AATAAA	-24	NA	63322501	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63321664
transcript_41931.known	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	1533.3864483554	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-3	True	NA	-32	True	AATAAA	-4	NA	49414884	49404071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
transcript_41940.known	chr17	-	1885	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	1361.07224887831	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	38	False	NA	-32	True	AATAAA	-4	NA	49414858	49404071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
transcript_41942.known	chr17	-	1834	7	FSM	ENSG00000167085.13	ENST00000300408.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	3120	junction_6	286.33119906073	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-1	True	NA	-12	True	AATAAA	-24	NA	49414882	49404051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_41943.known	chr17	+	5635	2	FSM	ENSG00000182575.8	ENST00000328741.6	5635	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCTAAGATGGGT	23	True	NA	28	True	AATAAA	-18	NA	49575870	49583827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49576274_49578595
transcript_41949.known	chr17	-	1860	12	FSM	ENSG00000121067.19	ENST00000509079.6	1860	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	83.0666365979897	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAGAAGGGAAAAGGAA	-13	True	NA	-10	True	AAAAAG	-30	NA	49678110	49599989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49677932
transcript_41951.known	chr17	-	2965	11	FSM	ENSG00000121067.19	ENST00000347630.6	2965	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	69.8730277002507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCTGTCATTGACT	9489	False	NA	NA	False	AATAAA	-18	NA	49678163	49598885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49677932
transcript_41953.known	chr17	-	2985	11	FSM	ENSG00000121067.19	ENST00000393328.6	2985	11	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_9	76.0168402395153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-13	True	NA	NA	False	AATAAA	-20	NA	49678110	49598883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49675894_49676017_49677932
transcript_4196.known	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	21.5	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	166	False	NA	-53	True	AATAAA	-24	NA	63323582	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63323490
transcript_41961.known	chr17	-	2850	10	FSM	ENSG00000121067.19	ENST00000504102.6	2850	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	20.3348511880345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	0	True	NA	NA	False	AATAAA	-20	NA	49678097	49598883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49677932
transcript_41963.known	chr17	+	3588	16	FSM	ENSG00000136504.13	ENST00000675278.1	3588	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	155.832160423393	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCTGTTTCATCTG	NA	False	NA	13	True	AATAAA	-12	NA	49788647	49829090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823236_49825505_49825543_49825999_49826147_49826692_49826800_49827400
transcript_41965.known	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	138.118977953813	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	20	False	NA	19	True	AATAAA	-18	NA	49788705	49829096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_4197.known	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.5	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	NA	False	NA	-53	True	AATAAA	-24	NA	63324441	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63324354
transcript_41971.nic	chr17	+	2688	9	NIC	ENSG00000136504.13	novel	912	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	87.1460699056475	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	1932	False	NA	19	True	AATAAA	-18	NA	49814964	49829096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_49815075_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_41974.known	chr17	-	1320	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_7	94.1540459831653	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCAAGCAAAATCACA	7048	False	NA	-33	True	AATAAA	-2	NA	49708090	49701338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
transcript_41976.known	chr17	-	1615	9	FSM	ENSG00000121073.15	ENST00000240333.12	1615	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_7	65.3604190240546	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTTTTCTTAGG	7174	False	49707987	-17	True	ATTAAA	-13	NA	49707964	49700942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
transcript_41977.nic	chr17	-	1119	9	NIC	ENSG00000121073.15	novel	1611	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	150.672191777381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTCTAAAAAATGCACT	4	True	NA	-15	True	AATAAA	-20	NA	49708192	49701320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49708075
transcript_41989.known	chr17	-	657	5	FSM	ENSG00000176358.16	ENST00000436235.6	718	5	52	9	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.77263412660235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGAATGGCTCCTTCT	2316	False	NA	-7	True	AATAAA	-7	NA	49848017	49838308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49838674_49839849_49839910_49841551_49841585_49844063_49844158_49847912
transcript_41990.known	chr17	-	597	4	FSM	ENSG00000176358.16	ENST00000326219.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGAATGGCTCCTTCT	2316	False	NA	-7	True	AATAAA	-7	NA	49848017	49838308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_49838674_49841551_49841585_49844063_49844158_49847912
transcript_41991.known	chr17	+	3364	11	FSM	ENSG00000005882.12	ENST00000503176.6	3364	11	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_4	36.9866192020844	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAATGGGCCCTGAG	-23	True	NA	NA	False	NA	NA	NA	50095350	50112152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884_50106070_50106793_50106884_50107075_50107154_50108155_50108233_50108318_50108418_50108611_50108720_50109286_50109401_50109956
transcript_41993.known	chr17	+	865	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	16.5730705262081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	13	True	NA	NA	False	TATAAA	-22	NA	50095386	50106368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
transcript_41994.known	chr17	-	547	2	FSM	ENSG00000253730.1	ENST00000523083.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCTAGTTGGGCTTT	5080	False	NA	-1	True	AATAAA	-18	NA	50161276	50158332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50158624_50161020
transcript_41995.known	chr17	+	1429	10	FSM	ENSG00000108823.17	ENST00000262018.8	1429	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.62936879248872	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	-12	True	NA	30	True	NA	NA	NA	50166004	50175928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50169091_50169255_50170142_50170352_50170639_50170667_50175256_50175450_50175711
transcript_41996.known	chr17	+	1057	8	FSM	ENSG00000108823.17	ENST00000344627.10	1057	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	1.98976975388345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	-12	True	NA	30	True	NA	NA	NA	50166004	50175928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50170639_50170667_50175256_50175450_50175711
transcript_42.known	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00113_+_0_800
transcript_42003.known	chr17	+	1272	6	FSM	ENSG00000249406.3	ENST00000654981.1	1272	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	3.55527776692624	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGATTTATAGAAAAGT	6525	False	NA	NA	False	AATAAA	-24	NA	50208129	50215423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50208199_50209335_50209407_50213834_50213916_50214100_50214776_50214919_50214983_50215110
transcript_42004.nnic	chr17	+	993	5	NNC	ENSG00000167105.8	novel	2693	5	NA	NA	-39	672	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	102.27780795461	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTTACTGATTGCGG	0	True	NA	32	True	GATAAA	-13	NA	50274426	50279788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278955_50279194
transcript_42005.known	chr17	+	2693	5	FSM	ENSG00000167105.8	ENST00000507382.2	2693	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	19.6468827043885	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAAAGCATCCATCAC	-13	True	NA	19	True	AATAAA	-19	NA	50274465	50281485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_42008.nnic	chr17	+	1027	5	NNC	ENSG00000167105.8	novel	2693	5	NA	NA	-13	677	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	101.265430922897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTGATTGCGGCTGAG	-26	True	NA	37	True	GATAAA	-18	NA	50274452	50279793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_50274584_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_42011.known	chr17	+	3507	11	FSM	ENSG00000015532.10	ENST00000017003.7	3507	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	15.7254570680791	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCATCACCATTCATTG	4	True	NA	42	True	NA	NA	NA	50346125	50361185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50358206_50358541_50359968
transcript_42017.known	chr17	-	686	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_3	124.115537571517	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	3	True	NA	-14	True	AATAAA	-38	NA	50373184	50367866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
transcript_42018.known	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_2	20	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	9832	False	NA	-15	True	AATAAA	-37	NA	50373207	50367867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50370100_50370454_50370587_50373130
transcript_42019.known	chr17	-	742	5	FSM	ENSG00000108826.16	ENST00000503633.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	684.646076451184	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-9	True	NA	-15	True	AATAAA	-37	NA	50373196	50367867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50368314_50368837_50368868_50370031_50370100_50370454_50370587_50373130
transcript_4202.known	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	175	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-5	True	NA	-53	True	AATAAA	-24	NA	63322458	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366_63321464_63322315
transcript_42022.known	chr17	+	2330	9	FSM	ENSG00000154920.15	ENST00000338165.9	2330	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.38152730712011	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTAGTGATTCTGA	-7	True	NA	38	True	AATAAA	-42	NA	50373228	50381483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50373278_50375184_50375984_50376065_50376194_50378594_50378682_50378773_50378896_50379106_50379225_50379451_50379568_50380311_50380502_50380762
transcript_42024.known	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_1	36.9082947617771	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-13	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
transcript_42029.nic	chr17	+	2247	17	NIC	ENSG00000167107.13	novel	2251	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	19.5795652403213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTCTTGCTGGTGGG	-8	True	NA	9	True	CATAAA	-15	NA	50426215	50474831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50464525_50464600_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_4203.known	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	2219	False	NA	-53	True	AATAAA	-24	NA	63321529	63320883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63321191_63321366
transcript_42032.known	chr17	+	2177	16	FSM	ENSG00000167107.13	ENST00000300441.9	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	12.9020239583649	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	-6	True	NA	15	True	CATAAA	-21	NA	50426217	50474837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_42034.nic	chr17	+	2155	16	NIC	ENSG00000167107.13	novel	2177	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	22.5402356292525	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTCTTGCTGGTGGG	-8	True	NA	9	True	CATAAA	-15	NA	50426215	50474831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50464217_50464295_50464525_50464600_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_42037.known	chr17	+	594	6	FSM	ENSG00000167107.13	ENST00000506582.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	19.3556193390963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGACCACAGTCATCTC	-6	True	NA	NA	False	NA	NA	NA	50426217	50462426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50426390_50460676_50460873_50461241_50461288_50461632_50461687_50462183_50462303_50462419
transcript_42038.nic	chr17	+	1307	6	ISM	ENSG00000167107.13	ENST00000300441.9	2177	16	-2	11783	-2	13	5prime_fragment	FALSE	canonical	3	50	junction_3	3.72021504754765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCTCCTGATTCCCG	-8	True	NA	NA	False	AATATA	-27	NA	50426215	50463054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419
transcript_42039.known	chr17	+	2251	17	FSM	ENSG00000167107.13	ENST00000427954.6	2251	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	22.4915782849937	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	-5	True	NA	15	True	CATAAA	-21	NA	50426218	50474837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50426390_50426904_50426980_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_42040.known	chr17	+	575	2	FSM	ENSG00000108846.16	ENST00000508929.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAGGAAATGACACCAAA	NA	False	NA	NA	False	AATATA	-39	NA	50687308	50691244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50687731_50691091
transcript_42041.known	chr17	-	4166	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	43.4647845962683	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCTATATGCCTTCATT	-22	True	NA	-17	True	ATTAAA	-18	NA	50707914	50693197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
transcript_42047.nic	chr17	+	2061	13	NIC	ENSG00000108848.16	novel	2284	11	NA	NA	-1	55	combination_of_known_junctions	FALSE	canonical	3	87	junction_11	243.466744249714	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGATTGTCTCTGTC	NA	False	NA	25	True	AATAAA	-21	NA	50719563	50752640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746_50750853_50751296_50751363_50752199
transcript_4206.known	chr1	+	3325	15	FSM	ENSG00000088035.18	ENST00000263440.6	3325	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	83.0092507753546	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGATTCAAGGTATC	-17	True	NA	NA	False	AATAAA	-32	NA	63367626	63438553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_42060.nic	chr17	+	1995	12	NIC	ENSG00000108848.16	novel	2284	11	NA	NA	-1	55	combination_of_known_junctions	FALSE	canonical	3	132	junction_11	205.361080912911	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGATTGTCTCTGTC	NA	False	NA	25	True	AATAAA	-21	NA	50719563	50752640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746_50750853_50752199
transcript_42067.known	chr17	+	2284	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_10	157.826772126911	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCTTGTTACACTCAAT	-14	True	NA	7	True	AATAAA	-13	NA	50719598	50751617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
transcript_42071.known	chr17	+	1972	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_10	79.0364472885769	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	-10	True	NA	23	True	AATAAA	-14	NA	50719602	50752709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
transcript_42079.known	chr17	+	6987	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_7	59.5572139072595	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGTGTAGGTAGTTAC	-10	True	NA	32	True	AATAAA	-26	NA	50719602	50756219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
transcript_42083.nic	chr17	+	1118	9	NIC	ENSG00000108848.16	novel	1112	9	NA	NA	-1	969	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	257.956391663397	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAGAAGAAAGAGAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	50719563	50745782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_42088.nic	chr17	+	925	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-35	5835	-1	969	5prime_fragment	FALSE	canonical	3	579	junction_7	42.7579805177839	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAGAAGAAAGAGAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	50719563	50745782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_42089.nic	chr17	+	1000	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-35	5760	-1	1044	5prime_fragment	FALSE	canonical	3	579	junction_7	42.7579805177839	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAAAAAGAAAGGGC	NA	False	NA	NA	False	AAGAAA	-30	NA	50719563	50745857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_42091.known	chr17	+	1112	9	FSM	ENSG00000108848.16	ENST00000508045.5	1112	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	309.470288355764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTGTTTGTTT	NA	False	NA	22	True	ATTAAA	-22	NA	50719569	50744813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50738136_50738200_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_42094.nic	chr17	+	537	5	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-35	9944	-1	0	5prime_fragment	FALSE	canonical	3	600	junction_2	33.6377763831083	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAATGAAGAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	50719563	50741673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656
transcript_42096.known	chr17	+	533	4	FSM	ENSG00000108848.16	ENST00000508218.5	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	35.9660333586504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAGAGACCTCCCTAA	-16	True	NA	NA	False	NA	NA	NA	50719596	50741292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101
transcript_42097.known	chr17	+	1351	2	FSM	ENSG00000229980.5	ENST00000416263.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTATTTGTTTGTTTT	350	False	NA	21	True	TATAAA	-18	NA	50866678	50868307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_50867218_50867495
transcript_42100.known	chr17	-	1298	3	FSM	ENSG00000008294.22	ENST00000511987.5	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTACATGTCAGGCTT	864	False	NA	NA	False	NA	NA	NA	51046837	51030913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_51031723_51041500_51041652_51046499
transcript_42101.known	chr17	+	1193	9	FSM	ENSG00000011052.21	ENST00000555572.1	1193	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	2798.82983360904	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCCTTGTGCTT	41	True	NA	24	True	AATAAA	-15	NA	51153635	51171742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_42104.known	chr17	+	1021	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	2348.45255173595	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-5	True	NA	26	True	AATAAA	-17	NA	51153589	51171744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_42108.known	chr17	+	986	6	FSM	ENSG00000239672.8	ENST00000336097.7	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	1510.05634331968	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCATTGCTTTTTT	-19	True	NA	53	True	ATTAAA	-43	NA	51153575	51162061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_42109.known	chr17	+	796	6	FSM	ENSG00000239672.8	ENST00000013034.3	796	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1548.037648121	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGACCAGGCTGTAGGA	70	False	NA	NA	False	NA	NA	NA	51153664	51161898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153725_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_42114.known	chr17	+	781	5	FSM	ENSG00000239672.8	ENST00000475573.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1290.15018505599	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTCATTGAGTTGGTT	2	True	NA	27	True	ATTAAA	-17	NA	51153596	51162035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097_51161273_51161727
transcript_42115.known	chr17	+	890	5	FSM	ENSG00000239672.8	ENST00000393196.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	2690	junction_1	327.113512408155	3274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCATTCTTTGCCTGC	-36	True	NA	160	True	TATAAA	-29	NA	51153558	51162168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_42120.known	chr17	+	692	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2863.95500139231	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	271	False	NA	25	True	AATAAA	-16	NA	51165814	51171743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_42121.known	chr17	+	850	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	2863.09788515866	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	4226	False	NA	26	True	AATAAA	-17	NA	51165434	51171744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_42123.known	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	4509	junction_1	993.013941241511	2833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-2	True	NA	26	True	AATAAA	-17	NA	51166410	51171744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_42125.known	chr17	+	749	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_1	2727.74421454798	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	5	True	NA	26	True	AATAAA	-17	NA	51166417	51171744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_42135.known	chr17	+	568	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	2544.70971931094	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	7	True	NA	26	True	AATAAA	-17	NA	51166419	51171744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
transcript_42139.known	chr17	+	987	2	FSM	ENSG00000239672.8	ENST00000487481.1	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	2690	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGGGTGGGTGCCTGTA	-23	True	NA	NA	False	AATACA	-14	NA	51153571	51156546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51153663_51155650
transcript_42142.known	chr17	+	1876	14	FSM	ENSG00000011260.14	ENST00000225298.12	1876	14	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_2	65.1874856396814	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTATCTGGTTCTTCC	-8	True	NA	NA	False	AATAAA	-25	NA	51260545	51297933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_51260927_51263273_51263387_51266181_51266281_51268836_51268905_51273361_51273451_51275865_51275992_51277129_51277305_51280004_51280106_51280388_51280480_51285244_51285369_51288028_51288204_51293902_51294046_51296964_51297004_51297781
transcript_42145.known	chr17	+	2168	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_15	88.9094420682578	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	8	True	NA	8	True	AATAAA	-16	NA	54900851	54961956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_42146.known	chr17	+	2228	16	FSM	ENSG00000141198.16	ENST00000445275.6	2228	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	129.634289016791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	0	True	NA	1	True	AATAAA	-9	NA	54900751	54961949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949550_54949624_54950044_54950127_54960565_54960628_54961234
transcript_42148.known	chr17	+	1521	16	FSM	ENSG00000141198.16	ENST00000572158.5	1521	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	130.499791400429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGACAATACCTACCAAC	-8	True	NA	NA	False	NA	NA	NA	54900835	54961314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912686_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_42152.known	chr17	+	1522	14	FSM	ENSG00000141198.16	ENST00000536554.5	1522	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	132.203313030844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTACTTAGTCCT	9	True	NA	NA	False	NA	NA	NA	54900852	54961475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_42157.known	chr17	+	1849	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	38.7011340632	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	13	True	NA	14	True	AGTAAA	-20	NA	54900856	54938033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
transcript_4216.known	chr1	-	1285	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	153.269390854272	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523502	63440772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_4217.known	chr1	-	1044	10	FSM	ENSG00000142856.17	ENST00000371092.7	1044	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	195.309314665383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	12	True	NA	-13	True	AATAAA	-16	NA	63523194	63440772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
transcript_42176.known	chr17	+	2337	7	FSM	ENSG00000141198.16	ENST00000572405.5	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	156.002848976834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACTTTAAACATATTT	-10	True	NA	NA	False	AATAAA	-29	NA	54900833	54917452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54900924_54903712_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745
transcript_42188.known	chr17	-	1054	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	220.06930726478	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAACCTGTGTCCTTGT	-2	True	NA	-11	True	AATAAA	-11	NA	54968654	54951908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
transcript_42189.known	chr17	-	1108	3	FSM	ENSG00000166260.13	ENST00000571584.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAGGCTTAATCCC	-1	True	NA	11	True	ATTAAA	-33	NA	54968703	54962902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_54963432_54964696_54964853_54968280
transcript_42190.known	chr17	+	15590	18	FSM	ENSG00000166263.13	ENST00000376352.6	15590	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	14.9978083750715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATTGGTTTTTGTGTGAA	-1	True	NA	9	True	AATAAA	-18	NA	54968764	55173632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55047088_55047155_55072899_55073077_55078077_55078195_55078685_55078736_55081049_55081184_55141309_55141368_55159796
transcript_422.known	chr1	+	3028	7	FSM	ENSG00000157916.20	ENST00000605895.6	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_1	144.138436542405	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	-4	True	NA	24	True	AATAAA	-16	NA	2391840	2405436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_42203.known	chr17	+	456	4	FSM	ENSG00000166263.13	ENST00000461444.5	456	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.3648246606609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAAAAGACCCACCAG	5	True	NA	NA	False	NA	NA	NA	54968726	54990988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824
transcript_42205.known	chr17	-	2569	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_6	24.0346971411471	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-3	True	NA	-20	True	AATAAA	-14	NA	55421835	55392621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_42206.nnic	chr17	-	1693	3	NNC	ENSG00000166292.12	novel	1755	2	NA	NA	-2536	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGTTAATTATTTGCT	6555	False	NA	NA	False	ATTAAA	-23	NA	55725560	55719626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_55721136_55722618_55722730_55725487
transcript_42207.known	chr17	+	2680	6	FSM	ENSG00000141179.14	ENST00000576183.5	2680	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	66.5540381945378	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTTGTCCTGTGTAC	16	True	NA	18	True	AATAAA	-11	NA	55751060	55777368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55775310
transcript_42209.known	chr17	+	1972	6	FSM	ENSG00000141179.14	ENST00000268896.10	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	24.5226425982193	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	6	True	NA	24	True	AATAAA	-17	NA	55751050	55777374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_4221.known	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	90.3949666740356	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-19	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_42211.known	chr17	+	919	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	69.3195499119837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGAGCTCGCATTCTA	1	True	NA	NA	False	AATAAA	-20	NA	55751093	55823090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
transcript_42213.known	chr17	+	1856	6	FSM	ENSG00000141179.14	ENST00000325214.10	1856	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	64.8919101275344	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	13	False	NA	24	True	AATAAA	-17	NA	55751399	55777374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_55751478_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_42218.known	chr17	-	4248	13	FSM	ENSG00000121060.19	ENST00000648772.1	4248	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	10.7247766099501	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAATAAAAATGCATGGT	-17	True	NA	NA	False	TTTAAA	-4	NA	56914080	56836386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_56838621_56843017_56843118_56843652_56843791_56851942_56852073_56854919_56855111_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
transcript_42219.known	chr17	+	1843	2	FSM	ENSG00000153933.10	ENST00000572810.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTTCTATTTCC	-37	True	NA	NA	False	AATAAA	-13	NA	56834106	56836466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56834261_56834777
transcript_42220.known	chr17	+	348	1	FSM	ENSG00000274213.1	ENST00000619432.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTTTTTTCTTCTTCTT	12	False	NA	10	True	AATAAA	-20	NA	56914185	56914533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56914200_56914500
transcript_42221.known	chr17	-	2634	7	FSM	ENSG00000121058.5	ENST00000240316.5	2634	7	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	28.3705637746043	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTACCGAGTTATCAT	-13	True	NA	-15	True	AATAAA	-17	NA	56961050	56938198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56949768_56949888_56950997_56960774
transcript_42225.nic	chr17	-	588	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	6	12480	6	234	5prime_fragment	FALSE	canonical	3	335	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAATGTGAATATAAAA	-7	True	NA	NA	False	AAGAAA	-16	NA	56961044	56950678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_56950997_56960774
transcript_42226.nic	chr17	-	570	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-54	12558	-54	156	5prime_fragment	FALSE	canonical	3	335	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAGAAAAAATAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	56961104	56950756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_56950997_56960774
transcript_42232.known	chr17	+	1915	13	FSM	ENSG00000121064.13	ENST00000576154.5	1915	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	111.800510583211	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	11	True	NA	23	True	AATAAA	-23	NA	56978147	57006768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998373_56998499_57000854_57000993_57002017_57002182_57006172
transcript_42234.known	chr17	+	1921	13	FSM	ENSG00000121064.13	ENST00000262288.8	1921	13	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_9	30.3620514238855	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	-6	True	NA	23	True	AATAAA	-23	NA	56978130	57006768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998384_56998499_57000854_57000993_57002017_57002182_57006172
transcript_42239.nic	chr17	+	1849	12	NIC	ENSG00000121064.13	novel	1921	13	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	109.383471336637	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	NA	False	NA	23	True	AATAAA	-23	NA	56978088	57006768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_57000854_57000993_57002017_57002182_57006172
transcript_42247.known	chr17	-	713	3	FSM	ENSG00000263004.3	ENST00000576871.2	740	3	19	8	2	-2	multi-exon	FALSE	canonical	3	12	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGTTTGCAGTATT	14	False	NA	-7	True	AATAAA	-16	NA	57085022	57078297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_57078704_57079286_57079411_57084839
transcript_42248.known	chr17	+	3909	11	FSM	ENSG00000121057.13	ENST00000337714.8	3909	11	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_2	49.8260975794814	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCTTTGAGTCCATTT	-3	True	NA	23	True	CATAAA	-17	NA	57085245	57121344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_57085399_57105440_57107179_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
transcript_42249.known	chr17	+	4089	12	FSM	ENSG00000121057.13	ENST00000481416.5	4089	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	328.358829120152	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTGAGTCCATTTTT	1048	False	NA	25	True	CATAAA	-19	NA	57096535	57121346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_57096764_57105440_57107179_57107945_57108049_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
transcript_42250.known	chr17	+	6379	14	FSM	ENSG00000153944.12	ENST00000284073.7	6379	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	3.59157462459346	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGTGTTCTTTCAC	-24	True	NA	20	True	AATAAA	-25	NA	57256522	57684689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57652098_57652162_57674971_57675127_57676986_57677060_57679548
transcript_42254.known	chr17	+	1860	10	FSM	ENSG00000153944.12	ENST00000322684.7	1860	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	4.7557632353406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGGTTAGTTTCCTT	-15	True	NA	NA	False	ATTAAA	-13	NA	57257012	57632900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57631790
transcript_42258.known	chr17	-	5609	5	FSM	ENSG00000181610.13	ENST00000313608.13	5609	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_4	16.4981059518964	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCAGATTTCTTTTT	1	True	NA	-5	True	AATAAA	-22	NA	57850044	57834780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
transcript_42261.known	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	18.2756668824971	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-32	True	NA	-6	True	ATTAAA	-17	NA	57988254	57971551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
transcript_42264.nic	chr17	-	2435	6	NIC	ENSG00000136451.9	novel	4630	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	93.8517980648213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTTAAA	-26	True	NA	NA	False	AATATA	-20	NA	57988248	57973758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_57974901_57979151_57979314_57980602_57980805_57981872_57981937_57982698_57983394_57988078
transcript_42281.nic	chr17	-	2247	5	NIC	ENSG00000136450.13	novel	1317	5	NA	NA	-299	0	intron_retention	FALSE	canonical	3	323	junction_1	740.149435924935	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	-21	True	NA	-2	True	AATAAA	-18	NA	58007645	58003492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_58004002_58004922_58005601_58005800_58005974_58006342_58006528_58006943
transcript_42285.known	chr17	-	1317	5	FSM	ENSG00000136450.13	ENST00000584773.5	1317	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	865.726104203864	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAACAAGATAGAGTAT	-11	True	NA	NA	False	NA	NA	NA	58007261	58004587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58005042_58005413_58005601_58005800_58005974_58006342_58006528_58006943
transcript_42287.known	chr17	-	1720	4	FSM	ENSG00000136450.13	ENST00000581979.5	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	851.160123334943	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCAAAGATTTTTTTTT	18	True	NA	NA	False	NA	NA	NA	58007232	58003806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58004002_58004922_58005974_58006342_58006528_58006943
transcript_4229.nic	chr1	-	756	7	NIC	ENSG00000142856.17	novel	961	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	174.855575324958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-20	True	NA	-10	True	AATAAA	-19	NA	63523226	63440769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
transcript_42292.known	chr17	-	1465	4	FSM	ENSG00000136450.13	ENST00000583741.1	1465	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	964.434549360401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATATACATTTTCCTT	-11	True	NA	NA	False	ACTAAA	-17	NA	58007261	58004848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006906
transcript_42293.known	chr17	-	5343	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	0	0	0	multi-exon	FALSE	canonical	3	1661	junction_1	257.827246211274	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCCTTCATTTTGCAC	4	True	NA	-17	True	ATTAAA	-19	NA	58007246	58000918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
transcript_42298.known	chr17	-	3117	3	FSM	ENSG00000136450.13	ENST00000582730.6	3117	3	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_2	189.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGGTATTAGCCATCT	-11	True	NA	-35	True	ATTAAA	-17	NA	58007261	58003359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58005974_58006342_58006528_58006943
transcript_42299.known	chr17	-	2483	1	FSM	ENSG00000264112.1	ENST00000582096.1	2483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACTTGTTTTTATTTT	4960	False	NA	-3	True	ACTAAA	-25	NA	57991521	57989038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_57989000_57991500
transcript_42300.nnic	chr17	+	2308	3	NNC	ENSG00000264364.3	novel	6807	3	NA	NA	-508	-4319	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	25.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCACTGTTTGGGTCT	NA	False	NA	35	True	ATTAAA	-15	NA	58082910	58091223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_58082996_58087081_58087223_58089141
transcript_42301.known	chr17	+	6807	3	FSM	ENSG00000264364.3	ENST00000579991.3	6807	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCAGATAGTTTAGT	2	True	NA	NA	False	ATTAAA	-21	NA	58083418	58095542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58083684_58087081_58087223_58089141
transcript_42303.known	chr17	-	2343	18	FSM	ENSG00000011143.19	ENST00000393119.7	2343	18	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_4	20.1858150201492	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_42304.known	chr17	-	2403	18	FSM	ENSG00000011143.19	ENST00000675753.2	2403	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	35.6368651703478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214899_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_4231.nic	chr1	-	2066	7	ISM	ENSG00000142856.17	ENST00000460394.5	873	8	-227	887	93	-887	5prime_fragment	FALSE	canonical	3	402	junction_4	50.0422044100999	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATTTAGAGGCAGGAT	NA	False	NA	NA	False	AAAAAG	-22	NA	63523409	63452611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_42310.known	chr17	-	2260	17	FSM	ENSG00000011143.19	ENST00000678463.1	2260	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	38.2522466660456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_42313.known	chr17	-	2126	16	FSM	ENSG00000011143.19	ENST00000313863.11	2126	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	37.9101862593976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58206171_58206282_58206381_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_42315.known	chr17	-	3639	15	FSM	ENSG00000011143.19	ENST00000677416.1	3639	15	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_11	16.3988862240018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58206171_58206282_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_42316.known	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.1251231799241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-14	True	NA	-9	True	AATAAA	-21	NA	58219255	58207560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_42317.known	chr17	-	1626	14	FSM	ENSG00000011143.19	ENST00000585134.2	1626	14	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_10	15.1294219415027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCCAGGCATTGTGC	-14	True	NA	-14	True	AATAAA	-16	NA	58219255	58207565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_42320.nic	chr17	-	1647	9	ISM	ENSG00000011143.19	ENST00000581761.6	1289	12	-59	3076	-59	0	5prime_fragment	FALSE	canonical	3	113	junction_5	17.4852616508876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAAGGCATGGTGATAC	NA	False	NA	NA	False	NA	NA	NA	58219314	58211729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_42325.known	chr17	-	1643	5	FSM	ENSG00000213246.7	ENST00000577396.5	1643	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	186.571702034365	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGATTGTAGAAACGAAG	655	False	NA	-73	True	AAAAAG	-37	NA	58352423	58345246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58346314_58347187_58347242_58347528_58347585_58351401_58351509_58352064
transcript_42329.known	chr17	-	1401	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	230.912681909562	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCATTTTTCAATAC	14	True	NA	-1	True	TATAAA	-24	NA	58352167	58345174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
transcript_42332.known	chr17	-	539	3	FSM	ENSG00000213246.7	ENST00000581204.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_2	5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGCCTTGCCTCCCTC	5467	False	NA	-8	True	AATAAA	-32	NA	58347611	58345911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58346314_58347187_58347242_58347528
transcript_42333.nic	chr17	-	2413	5	ISM	ENSG00000108389.10	ENST00000582663.5	572	7	-31	1247	19	-1093	5prime_fragment	FALSE	canonical	3	29	junction_4	39.2077798402307	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATATATATATTCCAAG	-20	True	NA	NA	False	AAAAAG	-1	NA	58517886	58509414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
transcript_42335.nic	chr17	-	960	6	ISM	ENSG00000121101.16	ENST00000240361.12	4911	33	126040	0	-1725	0	3prime_fragment	FALSE	canonical	3	20	junction_2	3.65513337649941	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGCTGTGTAAGATAT	NA	False	NA	-1	True	AATAAA	-20	NA	58565983	58556679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_58557048_58557798_58557851_58559452_58559563_58561519_58561613_58564868_58564969_58565746
transcript_42337.known	chr17	-	1530	12	FSM	ENSG00000108387.16	ENST00000317256.10	1530	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	21.7540724789978	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCTGCTCAGGCCCCT	-8	True	NA	-109	True	TTTAAA	-42	NA	58532046	58520358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58526681_58526979_58531960
transcript_42342.known	chr17	+	2562	9	FSM	ENSG00000108384.15	ENST00000337432.9	2562	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	7.36439916082772	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTTTCAAAATCACCTA	0	True	NA	NA	False	AATAAA	-19	NA	58692601	58735611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_42343.nic	chr17	+	1159	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	22.3239641417021	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	-33	True	NA	10	True	AATAAA	-21	NA	58692568	58734331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692633_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_42344.nic	chr17	+	1210	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	22.9506944339382	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	-31	True	NA	10	True	AATAAA	-21	NA	58692570	58734331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_42346.nic	chr17	+	1206	7	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	28.6045839372332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGTGAATGGGAAAAATA	-35	True	NA	21	True	AATAAA	-32	NA	58692566	58734342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58734117
transcript_42347.known	chr17	+	567	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTACTTCATTATCC	26	True	NA	7	True	ATTAAA	-18	NA	58692627	58695336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58692789_58694930
transcript_42348.known	chr17	+	1609	2	FSM	ENSG00000108384.15	ENST00000486827.1	1609	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTGTTACTTCATTA	4	True	NA	4	True	ATTAAA	-15	NA	58692605	58695333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58693812_58694930
transcript_42349.known	chr17	+	474	4	FSM	ENSG00000108384.15	ENST00000584804.1	474	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	32.4995726467629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	5897	False	NA	10	True	AATAAA	-21	NA	58709858	58734331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58709991_58720745_58720813_58732483_58732545_58734117
transcript_42350.known	chr17	+	6560	7	FSM	ENSG00000175175.6	ENST00000308249.4	6560	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	4.01732359773132	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCATTTGTCTTTTTAT	-2	True	NA	20	True	AATAAA	-21	NA	58755853	58985179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_58756462_58955648_58955768_58965693_58965894_58969538_58969728_58972131_58972276_58972831_58972926_58979973
transcript_42352.known	chr17	-	4489	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_22	33.8930264224901	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	24	False	59106904	-5	True	AATAAA	-16	NA	59106880	58998201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_42360.known	chr17	-	353	4	FSM	ENSG00000108395.14	ENST00000584889.3	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	36.3532055746884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTAGTTGCCTTTTAG	436	False	NA	NA	False	NA	NA	NA	59106468	59088225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59088408_59091299_59091341_59104292_59104395_59106440
transcript_42361.known	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	221.64887146616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	19	True	NA	-74	True	AATATA	-6	NA	59155174	59112090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
transcript_42362.known	chr17	-	570	4	FSM	ENSG00000182628.13	ENST00000583976.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	186.483839037656	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAATTCTAACAGAGAA	16	True	NA	NA	False	AAGAAA	-11	NA	59155177	59112261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59154955
transcript_42363.known	chr17	-	2809	4	FSM	ENSG00000182628.13	ENST00000330137.12	2809	4	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_2	73.769912566032	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTGTCTTTATGTCTT	7	True	NA	1	True	NA	NA	NA	59155186	59109856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59155130
transcript_42368.known	chr17	-	625	3	FSM	ENSG00000182628.13	ENST00000437036.6	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	96.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTACACACGCATGCAC	-1	True	NA	-30	True	AATAAA	-42	NA	59155194	59112046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59131280_59131368_59154955
transcript_42369.known	chr17	-	595	3	FSM	ENSG00000182628.13	ENST00000581068.5	595	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	174	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGATAATATAGATGTT	-4	True	NA	61	True	NA	NA	NA	59155248	59111955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59131280_59131368_59155130
transcript_4237.known	chr1	-	873	8	FSM	ENSG00000142856.17	ENST00000460394.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	169.407731794735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGATTTTGAGCTATA	24	True	NA	NA	False	ATTAAA	-15	NA	63523182	63451724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_63452065_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_42371.known	chr17	-	689	3	FSM	ENSG00000182628.13	ENST00000578105.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	214.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTGTAAATTAAAGT	9	True	NA	-5	True	CATAAA	-34	NA	59155184	59111887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59119318_59119496_59155130
transcript_42376.known	chr17	+	1338	2	FSM	ENSG00000224738.2	ENST00000451775.2	1524	2	0	186	0	-186	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAATCCTCT	153	False	NA	NA	False	NA	NA	NA	59106597	59118267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59107592_59117923
transcript_42377.known	chr17	-	689	2	FSM	ENSG00000182628.13	ENST00000580541.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGTAAATTAAAGTAT	9	True	NA	-3	True	CATAAA	-36	NA	59155184	59111885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59154955
transcript_42379.known	chr17	-	533	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	516	False	NA	-60	True	NA	NA	NA	59155260	59111942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59112346_59155130
transcript_4238.known	chr1	+	2178	14	FSM	ENSG00000203965.13	ENST00000371088.5	2178	14	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_7	9.00887136735837	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGTGTTCTTATTTA	-1	True	NA	7	True	ATTAAA	-19	NA	63523524	63572693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63545915_63546058_63551724_63551835_63555357_63555516_63557113_63557248_63561708_63561858_63568309_63568520_63571020_63571129_63572441
transcript_42388.nnic	chr17	+	1669	11	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.8162164103201	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAATGGGTAGTGACG	-15	True	NA	NA	False	NA	NA	NA	59155740	59203849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201734_59203435
transcript_42389.nnic	chr17	+	1698	11	NNC	ENSG00000068489.13	novel	2334	11	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	18.8162164103201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAATGGGTAGTGACG	-15	True	NA	NA	False	NA	NA	NA	59155740	59203849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201758_59203430
transcript_4239.nnic	chr1	+	1505	7	NNC	ENSG00000203965.13	novel	2178	14	NA	NA	-14	852	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	13.0947402502769	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTCTCTGTGTCATT	-15	True	NA	NA	False	AATAAA	-32	NA	63523510	63535219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63534643
transcript_42395.known	chr17	+	6226	10	FSM	ENSG00000068489.13	ENST00000262293.9	6226	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	8.12099853983182	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTTTTTAAACTAGAAA	-10	True	NA	NA	False	AATAAA	-34	NA	59155745	59206709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562
transcript_42400.known	chr17	+	3221	4	FSM	ENSG00000167447.13	ENST00000300917.10	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	22.7596133534821	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATACATGGATGATA	5	True	NA	1	True	AATAAA	-23	NA	59210034	59215230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59211811_59212340_59212487_59212728_59213602_59214804
transcript_42402.nnic	chr17	+	682	3	NNC	ENSG00000068489.13	novel	6226	10	NA	NA	0	111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAAGCAGTTGAGTATT	-10	True	NA	NA	False	AATAAA	-16	NA	59155745	59203963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_59155806_59169747_59169842_59203435
transcript_4241.known	chr1	+	2337	11	FSM	ENSG00000079739.17	ENST00000371084.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_6	66.3502825917117	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGTCGTCTTTTTTTC	15	True	NA	NA	False	AATAAA	-17	NA	63593410	63660245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63659585
transcript_42410.known	chr17	+	3241	10	FSM	ENSG00000153982.11	ENST00000284116.9	3241	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.57994645755099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTCTTCATTCTTT	7	True	NA	NA	False	AATAAA	-17	NA	59220510	59275970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784_59272837_59273650
transcript_42413.known	chr17	+	738	4	FSM	ENSG00000153982.11	ENST00000583543.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.96655480858378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATACAAAAAATATTA	4	True	NA	NA	False	NA	NA	NA	59220681	59249228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739
transcript_42419.known	chr17	+	3575	18	FSM	ENSG00000108406.10	ENST00000251241.9	3575	18	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	19.3458774879442	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	-12	True	NA	15	True	AATAAA	-27	NA	59565609	59608345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59586152_59586234_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_42423.nic	chr17	+	3521	17	NIC	ENSG00000108406.10	novel	3575	18	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_10	32.3979165996828	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	NA	False	NA	15	True	AATAAA	-27	NA	59565582	59608345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_4243.known	chr1	+	5362	8	ISM	ENSG00000185483.13	ENST00000371079.6	5858	9	235286	6	234013	-6	3prime_fragment	FALSE	canonical	3	300	junction_6	320.927546022336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATATTATTTCCTGAA	2239	False	NA	9	True	ATTAAA	-42	NA	64009302	64181492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_64009377_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404_64142651_64158980_64159193_64177427
transcript_42432.known	chr17	+	8369	32	FSM	ENSG00000141367.12	ENST00000269122.8	8369	32	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_7	157.724281616517	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	-19	True	NA	NA	False	TATAAA	-3	NA	59619894	59696956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59693727
transcript_42435.known	chr17	-	2246	3	FSM	ENSG00000141378.15	ENST00000409433.2	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	4.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	NA	False	NA	-17	True	AATAAA	-17	NA	59707626	59697307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59697979_59698870_59700190_59707370
transcript_42436.known	chr17	-	731	2	FSM	ENSG00000141378.15	ENST00000393038.3	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	3	True	NA	-17	True	AATAAA	-17	NA	59707430	59697307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59697979_59707370
transcript_42437.known	chr17	-	1162	1	FSM	ENSG00000273702.1	ENST00000611877.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGCCTTTTATCTTT	206	False	NA	NA	False	AATAAA	-16	NA	59619714	59618552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59618600_59619700
transcript_42439.known	chr17	-	2491	9	FSM	ENSG00000108423.15	ENST00000325752.8	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	16.684105459988	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-30	True	NA	-13	True	AATAAA	-27	NA	59892943	59859478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_4244.known	chr1	+	2305	7	FSM	ENSG00000185483.13	ENST00000371080.5	2305	7	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_6	226.911877168208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTGAAACCTGGAGTT	2	True	NA	NA	False	AAAAAG	-19	NA	63774021	64143385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_63774509_64009304_64009377_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404
transcript_42442.nic	chr17	-	2284	8	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	28.1112948467192	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-34	True	NA	-13	True	AATAAA	-27	NA	59892947	59859478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59892696
transcript_42444.known	chr17	-	1769	8	FSM	ENSG00000108423.15	ENST00000340993.10	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	26.4706229158103	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAAAGTTCCATTCT	-7	True	NA	NA	False	NA	NA	NA	59892920	59860012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_4245.known	chr1	-	5092	25	FSM	ENSG00000162434.13	ENST00000342505.5	5092	25	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	14.6765473346651	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	-21	True	NA	-6	True	AATAAA	-17	NA	64966549	64833228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_42450.known	chr17	-	2184	7	FSM	ENSG00000108423.15	ENST00000613721.4	2184	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	34.1158158174312	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGTAAATGTGTACTT	-32	True	NA	-16	True	AATAAA	-45	NA	59892945	59859481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_42452.nic	chr17	-	1881	6	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	36.6529671377366	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-34	True	NA	-13	True	AATAAA	-27	NA	59892947	59859478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59886082_59886231_59890830_59891042_59892696
transcript_42456.known	chr17	-	1027	6	FSM	ENSG00000108423.15	ENST00000539018.5	1027	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	32.1409396253439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATGGGAAAAGTATACC	20	True	NA	NA	False	NA	NA	NA	59892893	59860316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59892696
transcript_42459.known	chr17	-	1490	5	FSM	ENSG00000108423.15	ENST00000346141.10	1490	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.1004866151242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAGTAAATAGGTAAAT	19	True	NA	8	True	AATAAA	-37	NA	59892715	59859489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59890830_59891042_59892696
transcript_42466.known	chr17	+	5428	15	FSM	ENSG00000108443.14	ENST00000225577.9	5428	15	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_10	11.6726175299288	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTGCTGAGAAACTG	-6	True	NA	NA	False	AATAAA	-27	NA	59893120	59950574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59914634_59914704_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_4247.known	chr1	+	6887	6	FSM	ENSG00000162433.15	ENST00000545314.5	6887	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	315.347807983503	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	-43	True	NA	39	True	AATAAA	-27	NA	65147548	65232145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65147666_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_42472.known	chr17	-	2122	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	16.431676725155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	4	True	NA	NA	False	ATTAAA	-22	NA	59964740	59952239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
transcript_42475.known	chr17	-	1893	8	FSM	ENSG00000189050.16	ENST00000482446.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	20.2121402193063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTCTGGACGTCATA	10	True	NA	1	True	AATAAA	-14	NA	59964734	59952361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962539_59962617_59962826_59963285_59964607
transcript_42479.known	chr17	-	1809	7	FSM	ENSG00000189050.16	ENST00000466544.5	1809	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	21.7389818835504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTAATAAGTGAAAATAA	-17	True	NA	-33	True	NA	NA	NA	59964761	59952395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962826_59963285_59964607
transcript_42481.known	chr17	+	692	3	FSM	ENSG00000267302.5	ENST00000593015.5	692	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGATCACTTGGTGC	343	False	NA	NA	False	AATAAA	-23	NA	59964831	59973104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_59965189_59966402_59966468_59972834
transcript_42482.known	chr17	-	6108	20	FSM	ENSG00000068097.16	ENST00000184956.11	6108	20	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_12	13.6200927018782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTTCAGATTTCTA	8	True	NA	NA	False	AATAAA	-34	NA	60078921	60041007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60044135_60046024_60046230_60047308_60047406_60048263_60048389_60049579_60049703_60050842_60050978_60055514_60055602_60056114_60056238_60057047_60057404_60059421_60059522_60059889_60060097_60066208_60066387_60067433_60067733_60069710_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_42485.nic	chr17	-	959	7	ISM	ENSG00000068097.16	ENST00000587003.5	3566	20	-13	26148	-12	98	5prime_fragment	FALSE	canonical	3	87	junction_3	14.3874945699382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTATGTTTATTTAG	-5	True	NA	0	True	NA	NA	NA	60078934	60069710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_42487.known	chr17	-	553	3	FSM	ENSG00000068097.16	ENST00000591074.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	65.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATATTTTTCCCCTTTCCT	8	True	NA	NA	False	AATAAA	-29	NA	60078921	60075614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60075834_60076129_60076238_60078695
transcript_42488.known	chr17	-	567	3	FSM	ENSG00000261040.8	ENST00000587298.2	577	3	0	10	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCATACTATTTGA	NA	False	NA	-6	True	AATAAA	-13	NA	60088467	60083571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60083767_60085102_60085204_60088196
transcript_42489.known	chr17	-	447	3	FSM	ENSG00000261040.8	ENST00000566140.6	523	3	76	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACTATTTGAGTTATT	137	False	NA	0	True	AATAAA	-19	NA	60088293	60083565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60083767_60085054_60085204_60088196
transcript_42491.known	chr17	-	1622	5	FSM	ENSG00000267248.4	ENST00000668564.1	1622	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGACTTTGTTCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	60135713	60126532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60126866_60128540_60128660_60128955_60129091_60132435_60132513_60134755
transcript_42492.nic	chr17	-	1489	4	FSM	ENSG00000267248.4	ENST00000690323.1	1509	4	20	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCAGACTTTGTTCTT	1	True	NA	NA	False	AATAAA	-25	NA	60135659	60126534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60126866_60128540_60128660_60128955_60129091_60134755
transcript_42493.known	chr17	-	1850	2	FSM	ENSG00000267248.4	ENST00000659112.2	1855	2	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATAATGTGGAATCAGT	NA	False	NA	NA	False	AATATA	-22	NA	60135693	60122656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60123569_60134755
transcript_42494.known	chr17	+	1123	8	FSM	ENSG00000167434.10	ENST00000300900.9	1123	8	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	5.35666664550076	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	0	True	NA	8	True	ATTAAA	-24	NA	60149972	60159546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_60150093_60155313_60155368_60156559_60156716_60157426_60157573_60157689_60157789_60158060_60158128_60158282_60158447_60159229
transcript_42495.known	chr17	-	6937	34	FSM	ENSG00000170832.13	ENST00000300896.9	6937	34	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_27	31.3445557535957	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAACTGTATAAAAAGTA	-2	True	NA	-50	True	AATAAA	-21	NA	60392133	60177326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_42496.nic	chr17	-	2182	16	ISM	ENSG00000170832.13	ENST00000300896.9	6937	34	-22	42244	-22	0	5prime_fragment	FALSE	canonical	3	164	junction_9	24.1826384003069	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGTGAAAACTA	200	False	NA	NA	False	NA	NA	NA	60392155	60219570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_42501.known	chr17	-	430	3	FSM	ENSG00000170832.13	ENST00000589761.1	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCATTAGAGAAATATA	427	False	NA	NA	False	AATAAA	-24	NA	60391928	60301449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60301705_60345480_60345609_60391881
transcript_42503.known	chr17	-	6492	13	FSM	ENSG00000062725.10	ENST00000083182.8	6492	13	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_1	9.9173669220548	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTGTATCTGTTTCC	-14	True	NA	-10	True	AATAAA	-16	NA	60526242	60443157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_60447835_60451879_60452046_60454301_60454493_60456295_60456382_60460662_60460788_60461809_60461916_60461993_60462062_60464020_60464111_60466290_60466460_60479147_60479272_60494465_60494618_60500398_60500488_60525793
transcript_42506.known	chr17	+	932	1	FSM	ENSG00000259349.3	ENST00000661567.1	932	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTCTATATAAATTC	8	True	NA	NA	False	AATAAA	-13	NA	60526303	60527235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_60526300_60527200
transcript_42507.known	chr17	-	799	1	FSM	ENSG00000253506.3	ENST00000521764.3	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	472	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAATGCTCTCTTTT	-12	True	NA	NA	False	AATAAA	-29	NA	61591219	61590420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_61590400_61591200
transcript_42508.known	chr17	-	6128	25	FSM	ENSG00000108506.13	ENST00000251334.7	6128	25	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_24	19.630926210673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	0	True	NA	-1	True	TATAAA	-25	NA	61927982	61865366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927653
transcript_42509.known	chr17	-	5878	25	FSM	ENSG00000108506.13	ENST00000444766.7	5878	25	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_24	22.3879928136093	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTAGTTTTTGTGTT	NA	False	NA	-4	True	TATAAA	-22	NA	61928016	61865369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927934
transcript_4251.known	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	328.221510568701	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	50	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_42514.known	chr17	+	5799	9	FSM	ENSG00000087995.16	ENST00000311506.10	5799	9	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_8	23.0908531674341	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGGCTCTGAATGGTA	7	True	NA	NA	False	AATAAA	-16	NA	62423896	62453385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_62424013_62424218_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_42519.known	chr17	+	1556	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	0	0	0	0	multi-exon	TRUE	canonical	3	255	junction_7	24.5755810444732	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	NA	False	NA	-15	True	NA	NA	NA	62423874	62448914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_42521.known	chr17	+	5345	22	FSM	ENSG00000146872.19	ENST00000682203.1	5345	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	84.491355271686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	11	False	NA	-28	True	ATTAAA	-43	NA	62479129	62615444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_62479291_62481123_62481207_62508407_62508554_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_42522.known	chr17	+	3227	21	FSM	ENSG00000146872.19	ENST00000343388.11	3227	21	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	53.5259516496437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCTTGGATTCTCTGA	31	False	NA	24	True	AATAAA	-18	NA	62479149	62613489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_42532.known	chr17	-	2929	6	FSM	ENSG00000008283.16	ENST00000360793.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	17.4126390877431	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCGCCTGTTATCTTCC	11	True	NA	-7	True	AATAAA	-14	NA	63446306	63432303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63446244
transcript_42536.known	chr17	-	3151	6	FSM	ENSG00000008283.16	ENST00000392976.5	3151	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	37.075059001976	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTCGCCTGTTATCT	2	True	NA	-10	True	AATAAA	-11	NA	63446184	63432306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63445897
transcript_42543.known	chr17	+	1367	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	260	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	85.5216883817986	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	0	True	NA	44	True	AATAAA	-27	NA	63550481	63594279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
transcript_42544.known	chr17	+	6324	7	FSM	ENSG00000136485.16	ENST00000614556.5	6324	7	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	22.0504472113883	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGACTGAATTTCTTT	-5	True	NA	31	True	AATAAA	-14	NA	63550476	63594266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999
transcript_42548.known	chr17	+	3959	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	0	0	0	0	multi-exon	TRUE	canonical	3	365	junction_5	51.2158063836684	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	-8	True	NA	11	True	AGTAAA	-17	NA	63774169	63819317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_42550.known	chr17	-	2195	14	FSM	ENSG00000108588.15	ENST00000403162.7	2195	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	265.004454579061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGTCTACATTAAAC	10	True	NA	-6	True	AATAAA	-17	NA	63773570	63746402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63772776_63772864_63773411
transcript_42552.known	chr17	-	3283	13	FSM	ENSG00000108588.15	ENST00000225726.10	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_3	54.8723265610473	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	-17	True	NA	-6	True	ATTAAA	-14	NA	63773597	63745254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_42555.known	chr17	-	2209	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_10	39.1065507818011	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	2	True	NA	-21	True	ATTAAA	-22	NA	63741874	63702834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_42556.known	chr17	-	2140	12	FSM	ENSG00000266173.7	ENST00000638702.1	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	43.8540027103457	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGGCATTGTGTCTG	-22	True	NA	-24	True	ATTAAA	-19	NA	63741832	63702837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728357_63728414_63741740
transcript_42557.known	chr17	-	1865	12	FSM	ENSG00000266173.7	ENST00000638276.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	47.8848481013144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGTGTGTGCCTCAT	11	True	NA	NA	False	NA	NA	NA	63741799	63703012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_42561.known	chr17	-	2153	11	FSM	ENSG00000266173.7	ENST00000638708.1	2153	11	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_9	40.532086055371	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	16	False	NA	-5	True	ATTAAA	-38	NA	63741860	63702818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_42562.known	chr17	-	2130	11	FSM	ENSG00000266173.7	ENST00000639835.1	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	38.5180477179205	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	15	False	NA	-5	True	ATTAAA	-38	NA	63741861	63702818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_42564.known	chr17	-	1238	11	FSM	ENSG00000266173.7	ENST00000582137.6	1238	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	50.2980118891393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTGGCCTGGTAACA	1	True	NA	NA	False	NA	NA	NA	63741875	63703657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_42565.known	chr17	-	2959	10	FSM	ENSG00000266173.7	ENST00000245865.10	2959	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.5566410010427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	49	True	NA	-21	True	ATTAAA	-22	NA	63741761	63702834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63704909_63706634_63706731_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_42570.known	chr17	-	602	5	FSM	ENSG00000136490.9	ENST00000578993.5	602	5	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	488.157953433108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTTCCTGCTTCG	18	True	NA	NA	False	NA	NA	NA	63700102	63698334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63698819_63699027_63699070_63699256_63699349_63700031
transcript_42571.known	chr17	-	756	5	FSM	ENSG00000136490.9	ENST00000578061.5	756	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	504.427150339868	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCCCTGGGAGGCCCC	4538	False	NA	NA	False	NA	NA	NA	63699861	63698288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699802
transcript_42572.nnic	chr17	-	1243	5	NNC	ENSG00000136490.9	novel	3192	5	NA	NA	64	0	intron_retention	FALSE	canonical	3	46	junction_4	492.305545367915	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	4361	False	NA	-19	True	AATAGA	-5	NA	63700038	63697815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699965
transcript_42573.known	chr17	-	3192	5	FSM	ENSG00000136490.9	ENST00000259006.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_4	52.4690384893796	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGAGCCAGCATGTCC	-5	True	NA	-11	True	AATAAA	-24	NA	63700125	63695887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700031
transcript_42574.nic	chr17	-	1440	4	ISM	ENSG00000136490.9	ENST00000578061.5	756	5	243	-473	243	0	3prime_fragment	FALSE	canonical	3	1168	junction_2	12.2565175405668	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	4781	False	NA	-19	True	AATAGA	-5	NA	63699618	63697815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256
transcript_42575.known	chr17	-	709	4	FSM	ENSG00000136490.9	ENST00000579814.1	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_3	59.7550555741242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAGGTGGGAAGGGGA	-12	True	NA	NA	False	NA	NA	NA	63700132	63698466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63699070_63699256_63699349_63700031
transcript_42576.known	chr17	-	2019	3	FSM	ENSG00000136490.9	ENST00000578067.5	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	1182	junction_2	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	12	True	NA	-19	True	AATAGA	-5	NA	63700108	63697815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63698712_63698798_63699070_63699256
transcript_42577.known	chr17	-	920	2	FSM	ENSG00000136490.9	ENST00000579329.1	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	1182	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATCTAGGTGCCTTTTCT	-22	True	NA	NA	False	NA	NA	NA	63699362	63698255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63699070_63699256
transcript_42578.known	chr17	-	1719	12	FSM	ENSG00000108588.15	ENST00000582252.1	1719	12	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	50.704784849278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCGTGCCACACTGAGT	10	True	NA	NA	False	AATAAA	-15	NA	63773570	63751769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_42579.known	chr17	-	1925	11	FSM	ENSG00000266173.7	ENST00000640086.1	1925	11	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	48.8114740609214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTTTCGTTGTCAG	-5	True	NA	-73	True	NA	NA	NA	63741815	63702886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_4258.nnic	chr1	+	1472	5	NIC	ENSG00000162433.15	novel	6887	6	NA	NA	24	138	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	384.092762233292	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGTCTTGGGAACC	-19	True	NA	52	True	NA	NA	NA	65147572	65227029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_65147666_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_42581.nic	chr17	-	3091	20	ISM	ENSG00000108592.17	ENST00000427159.7	3551	21	583	0	-10	0	intron_retention	FALSE	canonical	3	553	junction_6	60.8626353998217	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTTTTCTGACAGT	12	True	NA	-8	True	AATAAA	-16	NA	63827080	63819432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_63819995_63820078_63820174_63820254_63820439_63820838_63820939_63821029_63821116_63821353_63821644_63821722_63821844_63821983_63822169_63823816_63823953_63824083_63824240_63824330_63824412_63824636_63824738_63824824_63824930_63825047_63825164_63825241_63825437_63825535_63825636_63826055_63826136_63826257_63826305_63826566_63826673_63826835
transcript_42587.known	chr17	+	1494	12	FSM	ENSG00000087191.13	ENST00000375812.8	1494	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	521.637472669058	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTCTGTTAATGAGG	207	False	NA	32	True	AATAAA	-25	NA	63827683	63832026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_42592.known	chr17	+	1331	12	FSM	ENSG00000087191.13	ENST00000310144.11	1331	12	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_7	153.961248746892	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	-6	True	NA	25	True	AATAAA	-18	NA	63827430	63832019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_42593.known	chr17	-	1800	13	FSM	ENSG00000108604.17	ENST00000225742.13	1800	13	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_12	242.949740458575	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGGTCAGAGCTGGC	-4	True	NA	NA	False	NA	NA	NA	63842466	63832603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842380
transcript_42594.known	chr17	-	794	5	FSM	ENSG00000136487.18	ENST00000456543.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTTTGACTAGGTG	229	False	NA	-12	True	AATAAA	-12	NA	63881842	63880217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63880519_63880775_63880937_63881028_63881149_63881358_63881520_63881791
transcript_42597.known	chr17	-	1254	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	2.99332590941915	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-12	True	NA	-3	True	AATAAA	-21	NA	63932336	63928739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
transcript_42599.nic	chr17	-	1398	3	ISM	ENSG00000007314.12	ENST00000435607.3	7805	24	11228	18239	3	2580	internal_fragment	FALSE	canonical	3	13	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCACATTCCAGTCCC	NA	False	NA	NA	False	AGTAAA	-22	NA	63961690	63956792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_63957519_63959264_63959439_63961192
transcript_4260.nnic	chr1	+	1939	5	NIC	ENSG00000162433.15	novel	6887	6	NA	NA	24	605	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	384.092762233292	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTTTCCAGACTT	-19	True	NA	NA	False	AATAAA	-16	NA	65147572	65227496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_65147666_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_42600.nic	chr17	-	1175	3	ISM	ENSG00000007314.12	ENST00000435607.3	7805	24	11228	18462	3	2357	internal_fragment	FALSE	canonical	3	13	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAAGAATCACTTAG	NA	False	NA	NA	False	NA	NA	NA	63961690	63957015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_63957519_63959264_63959439_63961192
transcript_42601.known	chr17	-	1135	5	FSM	ENSG00000108622.11	ENST00000579788.6	1135	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGCCCACAGTGTCT	-30	True	NA	NA	False	AATACA	-15	NA	64020633	64002594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64002926_64003643_64003965_64005106_64005374_64006630_64006736_64020522
transcript_42602.known	chr17	+	106	2	FSM	ENSG00000266402.4	ENST00000580828.1	106	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCGGTGTGTGTC	-1	True	NA	56	True	AATAAA	-16	NA	64145969	64146309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_64145996_64146229
transcript_42603.known	chr17	+	278	2	FSM	ENSG00000266402.4	ENST00000582965.2	290	2	12	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTCCGGCTGCTAG	-1	True	NA	31	True	NA	NA	NA	64145969	64146476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_64146001_64146229
transcript_42604.known	chr17	-	1601	9	FSM	ENSG00000256525.8	ENST00000585104.2	1601	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	62.6333577257359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATATCATCAGCTAAG	9974	False	NA	-73	True	ATTAAA	-15	NA	64496939	64477851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64477989_64480288_64480390_64481245_64481447_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_42606.known	chr17	-	1557	9	FSM	ENSG00000256525.8	ENST00000671755.1	1557	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	63.0669287344802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAAATATTCTTCT	9974	False	NA	-33	True	NA	NA	NA	64496939	64477811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64483389_64483507_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_42609.known	chr17	-	1582	8	FSM	ENSG00000256525.8	ENST00000539111.7	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	11.8855082399723	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-15	True	NA	-6	True	AATAAA	-17	NA	64497054	64477784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_42610.nic	chr17	-	1458	8	NIC	ENSG00000256525.8	novel	1582	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	47.0644369401122	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-16	True	NA	-6	True	AATAAA	-17	NA	64497055	64477784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496531
transcript_42613.nnic	chr17	-	1410	7	NNC	ENSG00000256525.8	novel	1731	5	NA	NA	-3	-1757	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	54.6768283238481	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGCTTTAATTAAA	-18	True	NA	NA	False	NA	NA	NA	64497057	64482104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_64482235_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_42618.known	chr17	+	2754	20	FSM	ENSG00000258890.8	ENST00000556440.7	2754	20	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_4	53.3092685782078	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	-14	True	NA	12	True	AATAAA	-16	NA	64506976	64537946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64519320_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
transcript_4263.known	chr1	+	6845	5	FSM	ENSG00000162433.15	ENST00000327299.8	6845	5	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	115.970901522753	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	13	True	NA	39	True	AATAAA	-27	NA	65148202	65232145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_42631.known	chr17	-	4747	14	FSM	ENSG00000108654.16	ENST00000677726.1	4747	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	1454.57773209211	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	392	False	NA	-8	True	AATAAA	-13	NA	64506521	64498258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64501260_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42632.known	chr17	-	3998	14	FSM	ENSG00000108654.16	ENST00000678814.1	3998	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	1449.02803579527	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	392	False	NA	-8	True	AATAAA	-13	NA	64506521	64498258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42635.known	chr17	-	3868	14	FSM	ENSG00000108654.16	ENST00000577922.6	3868	14	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_13	1067.03991374025	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	182	False	NA	-7	True	AATAAA	-14	NA	64506731	64498257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506260_64506513
transcript_42636.known	chr17	-	4461	14	FSM	ENSG00000108654.16	ENST00000585111.2	4461	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	1078.94807416556	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	NA	False	NA	-7	True	AATAAA	-14	NA	64507562	64498257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754
transcript_42643.known	chr17	-	2021	13	FSM	ENSG00000108654.16	ENST00000578804.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_12	1099.4193511678	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATGTAAATGTCTGTT	957	False	NA	NA	False	NA	NA	NA	64505956	64499913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
transcript_42644.known	chr17	-	3684	13	FSM	ENSG00000108654.16	ENST00000225792.10	3684	13	0	0	0	0	multi-exon	FALSE	canonical	3	3473	junction_2	264.756321401817	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-2	True	NA	-3	True	AATAAA	-18	NA	64506289	64498253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42651.known	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3649	junction_9	220.01945819284	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-2	True	NA	-7	True	AATAAA	-23	NA	64506289	64499615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_42673.known	chr17	-	1168	6	FSM	ENSG00000214176.10	ENST00000584585.2	1191	6	20	3	3	0	multi-exon	FALSE	canonical	0	0	junction_1	9.30376267969041	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAGATAATCTTTTT	9621	False	NA	NA	False	AATAAA	-37	NA	64837136	64820693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64821018_64821766_64822053_64822253_64822394_64824624_64824873_64829160_64829250_64837055
transcript_42677.nnic	chr17	-	917	6	FSM	ENSG00000214174.9	ENST00000688372.1	867	6	-52	2	-14	0	multi-exon	FALSE	canonical	1	2	junction_4	81.5279093317129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	392	False	NA	72	True	AATAAA	-15	NA	64975631	64968037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973353_64974554_64974642_64975559
transcript_42678.nnic	chr17	-	1633	6	FSM	ENSG00000214174.9	ENST00000687667.1	1628	6	-6	1	0	0	multi-exon	FALSE	canonical	3	31	junction_5	73.7547286619644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	5	True	NA	72	True	AATAAA	-15	NA	64975573	64968037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64974950
transcript_42679.nnic	chr17	-	1082	6	FSM	ENSG00000214174.9	ENST00000693419.1	1068	6	-26	12	-14	0	multi-exon	FALSE	canonical	3	49	junction_5	69.9674209900579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	392	False	NA	72	True	AATAAA	-15	NA	64975631	64968037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64975559
transcript_42689.nnic	chr17	-	962	5	FSM	ENSG00000214174.9	ENST00000690715.1	993	5	19	12	1	0	multi-exon	FALSE	canonical	3	23	junction_4	78.0076118080793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-20	True	NA	72	True	AATAAA	-15	NA	64975598	64968037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64975559
transcript_4269.known	chr1	+	928	5	FSM	ENSG00000162433.15	ENST00000474968.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	331.089395027989	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTCAAATGGTGTGTAA	6	True	NA	NA	False	AAGAAA	-14	NA	65149001	65226439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65149141_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_42690.nnic	chr17	-	806	5	NIC	ENSG00000214174.9	novel	1068	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	83.8614929511752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	392	False	NA	72	True	AATAAA	-15	NA	64975631	64968037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_64968382_64972533_64972663_64972753_64972928_64974554_64974642_64975559
transcript_427.nic	chr1	-	2063	6	NIC	ENSG00000157911.11	novel	2835	6	NA	NA	-46	19	intron_retention	TRUE	canonical	3	7	junction_5	111.700671439343	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGTACGTTACTAACAC	-4	True	NA	-33	True	AATAAA	-16	NA	2413843	2404818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_2405835_2406483_2406620_2406719_2406896_2408451_2408859_2410370_2410452_2413596
transcript_42700.nnic	chr17	-	975	4	FSM	ENSG00000214174.9	ENST00000690613.1	921	4	-63	9	-54	0	multi-exon	FALSE	canonical	3	29	junction_3	93.8130528705302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	352	False	NA	72	True	AATAAA	-15	NA	64975671	64968037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972317_64972663_64972753_64972928_64975559
transcript_42702.nnic	chr17	-	759	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-54	12	-54	0	multi-exon	FALSE	canonical	3	29	junction_3	83.5915997906222	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	352	False	NA	72	True	AATAAA	-15	NA	64975671	64968037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_42704.nnic	chr17	-	631	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-3	89	-3	-4	multi-exon	FALSE	canonical	3	29	junction_3	83.5915997906222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGACTAGAACCTTCT	-42	True	NA	-5	True	AATAAA	-25	NA	64975620	64968114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_42710.known	chr17	+	2492	19	FSM	ENSG00000108370.17	ENST00000262406.10	2492	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	4.05517502019881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGTGTGTGTCTGGTTT	7	True	NA	15	True	AATAAA	-25	NA	65137369	65227703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65189285_65189316_65190174_65190237_65193542_65193657_65197125_65197242_65201992_65202081_65204162_65204302_65207921_65208008_65210487_65210606_65225001_65225487_65227274
transcript_42711.known	chr17	+	645	10	FSM	ENSG00000108370.17	ENST00000577186.1	645	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	5.16636797225008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGTATTAAGAAGAATA	91	False	NA	NA	False	NA	NA	NA	65137591	65180037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65179995
transcript_42713.known	chr17	+	2736	3	FSM	ENSG00000108370.17	ENST00000638125.1	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	11	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGATTTCGTTGATT	9	True	NA	16	True	TATAAA	-19	NA	65100811	65113130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_65101043_65101206_65101297_65110715
transcript_42714.known	chr17	+	761	3	FSM	ENSG00000108370.17	ENST00000583473.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAGCACCTGCAGATC	4	True	NA	NA	False	NA	NA	NA	65137430	65158791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_65137598_65153421_65153519_65158294
transcript_42715.known	chr17	-	3447	27	FSM	ENSG00000154240.17	ENST00000535342.7	3447	27	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	5.53151273487594	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTCTACTTTTTAT	-1	True	NA	1	True	ATTAAA	-21	NA	66192133	65635536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_65635975_65637123_65637189_65640963_65641066_65689128_65689219_65743067_65743218_65750661_65750725_65851803_65852035_65902151_65902335_65927581_65927690_65961462_65961599_66005689_66005770_66027500_66027561_66028312_66028406_66029122_66029253_66029868_66030024_66053735_66053880_66062962_66063082_66066777_66066878_66069914_66070002_66096250_66096329_66096584_66096633_66129745_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_42723.known	chr17	-	3517	27	FSM	ENSG00000154240.17	ENST00000392769.6	3517	27	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_26	6.34836791214317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTTTTATTTCTACTTT	23	True	NA	-3	True	ATTAAA	-17	NA	66191869	65635540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_65635975_65637123_65637189_65640963_65641066_65689128_65689219_65743067_65743218_65750661_65750725_65851803_65852035_65902151_65902335_65927581_65927690_65961462_65961599_66005689_66005770_66027500_66027561_66028312_66028406_66029122_66029253_66029868_66030024_66053735_66053880_66062962_66063082_66066777_66066878_66069914_66070002_66096250_66096329_66096584_66096633_66129745_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191658
transcript_4273.known	chr1	+	867	5	FSM	ENSG00000162433.15	ENST00000479060.1	867	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	407.383725742696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGTGTGGATTTCAAA	21	False	NA	NA	False	AAGAAA	-4	NA	65165931	65226429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65166020_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_42734.known	chr17	-	1872	14	FSM	ENSG00000198265.12	ENST00000417253.7	1872	14	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	12.5787460452545	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGGCTATCTAGGGA	0	True	NA	NA	False	AATATA	-3	NA	67245187	67167525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_42739.nnic	chr17	+	564	2	NNC	ENSG00000285877.1	novel	2511	5	NA	NA	1611	-15052	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCATGGTGGTGCGTG	1061	False	NA	NA	False	ATTAAA	-14	NA	67245892	67258451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_67245969_67257963
transcript_42741.known	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_3	40.1950245677248	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	9	True	NA	-3	True	AATAAA	-20	NA	67366577	67337915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_4275.nnic	chr1	+	2175	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	59	-1742	-22	1742	multi-exon	FALSE	canonical	3	27	junction_2	99.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTTTAAAATTTTTT	-38	True	NA	17	True	AATAAA	-21	NA	65420645	65433806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_42755.known	chr17	+	2844	18	FSM	ENSG00000130935.10	ENST00000253247.9	2844	18	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_10	73.7682708585956	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTAATCTCTCAGTA	9	True	NA	NA	False	AATAAA	-15	NA	67717935	67744531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_67718089_67719673_67719788_67719905_67719963_67721377_67721527_67722579_67722638_67724048_67724194_67726459_67726649_67734362_67734440_67735899_67736024_67736665_67736755_67737070_67737146_67737507_67737693_67737846_67737973_67738121_67738356_67738931_67739011_67739515_67739609_67743478_67743587_67743742
transcript_42785.known	chr17	+	1582	8	FSM	ENSG00000171634.19	ENST00000581258.5	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	86.4902967307399	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGACTTTCTGGACTTTA	2003	False	NA	15	True	AATAAA	-16	NA	67947753	67981762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67981435
transcript_42789.known	chr17	-	1082	3	FSM	ENSG00000186665.10	ENST00000449250.3	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	22	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAATAAAAAATAGT	25	True	NA	NA	False	ATTAAA	-5	NA	67993545	67991335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_67992104_67993043_67993236_67993423
transcript_4279.known	chr1	+	4541	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	20.8859335970941	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	-16	True	NA	NA	False	AATAAA	-21	NA	65420667	65436007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
transcript_42791.known	chr17	+	2082	10	FSM	ENSG00000182481.10	ENST00000679346.1	2082	10	0	0	0	0	multi-exon	FALSE	canonical	3	4251	junction_4	337.709313236863	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-12	True	NA	20	True	AATAAA	-30	NA	68035729	68046854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_42792.known	chr17	+	1973	11	FSM	ENSG00000182481.10	ENST00000679078.1	1973	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1410.71476918617	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-7	True	NA	20	True	AATAAA	-30	NA	68035734	68046854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68035837_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_42793.known	chr17	+	2456	11	FSM	ENSG00000182481.10	ENST00000537025.6	2456	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1410.71476918617	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGACTTCACCATGCCT	165	False	NA	8	True	AATAAA	-18	NA	68035959	68046842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68036557_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_42794.known	chr17	+	2007	11	FSM	ENSG00000182481.10	ENST00000584026.6	2007	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1410.42372711182	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-7	True	NA	20	True	AATAAA	-30	NA	68035734	68046854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68035841_68037079_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_42795.known	chr17	-	672	3	FSM	ENSG00000265055.2	ENST00000579629.2	672	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTAATGAGTGTGG	-4	True	NA	57	True	ATTAAA	-30	NA	68101496	68096045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_68096479_68100551_68100709_68101414
transcript_42800.known	chr17	+	1339	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	228.140754977344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	-36	True	NA	4	True	AATAAA	-1	NA	68248034	68257139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42804.known	chr17	+	1378	8	FSM	ENSG00000196704.14	ENST00000392720.6	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	213.972914555243	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCATCTTACTGG	-28	True	NA	19	True	AATAAA	-16	NA	68248042	68257154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248087_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42813.nic	chr17	+	1340	8	NIC	ENSG00000196704.14	novel	1498	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	253.416330836617	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTTTCAAGTACCTGAA	-30	True	NA	23	True	AATAAA	-39	NA	68248040	68257090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_68248111_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42814.nic	chr17	+	1405	8	NIC	ENSG00000196704.14	novel	1498	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	253.416330836617	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	-30	True	NA	20	True	AATAAA	-17	NA	68248040	68257155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_68248111_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42818.known	chr17	+	1498	8	FSM	ENSG00000196704.14	ENST00000612294.4	1498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.410496716925	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTACTGGCCTGGTCTGT	277	False	NA	29	True	AATAAA	-26	NA	68248003	68257164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248158_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42823.known	chr17	+	1932	7	FSM	ENSG00000196704.14	ENST00000359904.8	1932	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_3	37.5972812255827	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	-28	True	NA	20	True	AATAAA	-17	NA	68248042	68257155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_4283.known	chr1	+	377	3	FSM	ENSG00000213625.9	ENST00000497874.5	377	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	99.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTCATTTGTTTATG	-16	True	NA	9	True	AATAAA	-18	NA	65420667	65428009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65427781
transcript_42831.known	chr17	+	1722	6	FSM	ENSG00000196704.14	ENST00000359783.8	1722	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	295.263678768656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATAATAAAAACTCTAG	-20	True	NA	-8	True	AATGAA	-8	NA	68248050	68257127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68248706_68250187_68250471_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_42835.known	chr17	+	2554	12	FSM	ENSG00000141337.13	ENST00000621439.5	2554	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_6	2.55193979047604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACACAGAGCAGACATT	-8	True	NA	22	True	AATAAA	-29	NA	68291494	68420814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68291569_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_42836.nic	chr17	+	933	2	ISM	ENSG00000141337.13	ENST00000621439.5	2554	12	10	113003	10	33247	5prime_fragment	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGCTGATTTAGTTAAT	2	True	NA	NA	False	NA	NA	NA	68291504	68307811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_68291569_68306942
transcript_42838.known	chr17	-	1908	13	FSM	ENSG00000070540.13	ENST00000262139.10	1908	13	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_5	32.6045327455487	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAGGTTTTTATATAT	-4	True	NA	-16	True	AATAAA	-15	NA	68457496	68421280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_4284.known	chr1	+	492	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	99.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGGAGATGAGTTTTA	3	True	NA	NA	False	AAGAAA	-8	NA	65420586	65432064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_42842.known	chr17	+	3697	12	FSM	ENSG00000108946.16	ENST00000536854.6	3697	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	651.826537286373	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	-3	True	NA	NA	False	AATAAA	-21	NA	68512449	68532762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42843.known	chr17	+	3576	11	FSM	ENSG00000108946.16	ENST00000358598.6	3576	11	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	473.126251649599	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	2	True	NA	NA	False	AATAAA	-21	NA	68512031	68532762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42845.nic	chr17	+	1453	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	-80	0	combination_of_known_junctions	TRUE	canonical	3	130	junction_10	632.346582184169	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	88	False	NA	24	True	AATAAA	-25	NA	68511904	68551319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_42846.known	chr17	+	4253	11	FSM	ENSG00000108946.16	ENST00000589228.6	4253	11	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	181.078684554533	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGGGTTGACAGTCC	-23	True	NA	16	True	AATAAA	-17	NA	68512429	68533431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42848.nic	chr17	+	1387	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_10	487.872565328283	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	307	False	NA	24	True	AATAAA	-25	NA	68512376	68551319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_4285.nnic	chr1	+	1853	3	NNC	ENSG00000213625.9	novel	4541	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_2	111.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	-16	True	NA	NA	False	AATAAA	-21	NA	65420667	65436007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_65420741_65425302_65426706_65435630
transcript_42855.known	chr17	+	556	2	FSM	ENSG00000108946.16	ENST00000592194.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAATTCTTTGTAACTT	-38	True	NA	NA	False	AATAAA	-8	NA	68512414	68515815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68515393
transcript_42858.known	chr17	+	3551	11	FSM	ENSG00000108946.16	ENST00000392710.8	3551	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	508.55683064924	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAATGAATCAGT	-3	True	NA	NA	False	AATAAA	-18	NA	68512449	68532759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_68512549_68515393_68515567_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_42859.known	chr17	-	804	6	FSM	ENSG00000154265.16	ENST00000587607.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	5.95315042645489	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGATAATGGGACT	188	False	NA	NA	False	AATAAA	-5	NA	69327090	69306762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_69306955_69308279_69308369_69309261_69309424_69313091_69313297_69314313_69314431_69327051
transcript_42861.known	chr17	+	1851	12	FSM	ENSG00000108984.15	ENST00000359094.7	1851	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	28.7206551641471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTCTTCTGACACTTG	93	False	NA	NA	False	AGTAAA	-4	NA	69414833	69542510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517552_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_42862.known	chr17	+	13405	12	FSM	ENSG00000108984.15	ENST00000590474.7	13405	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	9.45279704113161	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTACATTAATTG	-14	True	NA	18	True	AATAAA	-20	NA	69414696	69553865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_42864.known	chr17	+	1512	12	FSM	ENSG00000108984.15	ENST00000589647.5	1512	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.0027071976633	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAAGCTTCTCAGACTT	24	False	NA	38	True	ATTAAA	-24	NA	69502428	69542019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_69502686_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_4287.known	chr1	+	3982	10	FSM	ENSG00000184588.18	ENST00000371045.9	3982	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	5.01356185452377	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGGCCCACTTATTT	191	False	NA	8	True	AATAAA	-20	NA	66332003	66374579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66332621_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
transcript_42870.known	chr17	-	645	4	FSM	ENSG00000228639.8	ENST00000430908.8	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTACATGTGTCTT	3664	False	NA	NA	False	AATAAA	-19	NA	72030604	72021850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72021980_72024152_72024305_72025897_72025978_72030320
transcript_42871.nnic	chr17	+	400	3	NNC	ENSG00000256124.6	novel	3684	3	NA	NA	25	1133	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATTTTCTTAATAACAT	-14	True	NA	NA	False	AATAAA	-17	NA	72030625	72037449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_72030852_72037044_72037132_72037362
transcript_42872.known	chr17	+	3684	3	FSM	ENSG00000256124.6	ENST00000472655.4	3684	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTATTCTGTGGTTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	72030560	72041310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_72030852_72037044_72037132_72038004
transcript_42874.nic	chr17	-	2874	10	NIC	ENSG00000133195.12	novel	2752	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	25.3552536743155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTACGTTCAGT	-12	True	NA	-17	True	AATAAA	-17	NA	73092693	72645948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092494
transcript_42875.known	chr17	-	2752	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.137271518771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTTACGTTCAG	-7	True	NA	-18	True	AATAAA	-16	NA	73092688	72645949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_42876.known	chr17	-	2737	10	FSM	ENSG00000133195.12	ENST00000255559.8	2732	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	43	junction_5	12.7956396894305	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTACGTTCAGT	-12	True	NA	-17	True	AATAAA	-17	NA	73092693	72645948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_42884.nic	chr17	-	1065	7	NIC	ENSG00000133195.12	novel	1004	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	33.3866240681304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	7029	False	NA	NA	False	TTTAAA	-16	NA	73092721	72837799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_72838121_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_42886.known	chr17	-	1004	7	FSM	ENSG00000133195.12	ENST00000579732.5	1004	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.8677190507569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	0	True	NA	NA	False	TTTAAA	-16	NA	73092681	72837799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_72838121_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_42887.known	chr17	+	3618	6	FSM	ENSG00000141219.16	ENST00000535032.7	3618	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	64.2638311960935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCCTGAGCTGATTA	1	True	NA	113	True	AATAAA	-22	NA	73232432	73248959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_42889.known	chr17	+	2075	6	FSM	ENSG00000141219.16	ENST00000426147.6	2075	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	79.3710274596468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATACAGGAAGTAAACG	-15	True	NA	NA	False	AATAAA	-26	NA	73232661	73245344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73245167
transcript_4289.known	chr1	+	2037	10	FSM	ENSG00000184588.18	ENST00000480109.2	2037	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	13.3869293171814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGCCCACCATGGGGG	-6	True	NA	NA	False	NA	NA	NA	66354381	66372738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66354895_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
transcript_42890.known	chr17	+	3645	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	40.3910881259715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	11	False	NA	101	True	AATAAA	-10	NA	73232621	73248947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_42893.known	chr17	+	2049	5	FSM	ENSG00000141219.16	ENST00000577615.5	2049	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	85.8690864048291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGCTGAAACATAATGAA	33	True	NA	NA	False	AATAAA	-23	NA	73232464	73247530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_42896.known	chr17	+	3449	5	FSM	ENSG00000141219.16	ENST00000268942.12	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	73.9746578227977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTCTTTTATACT	26	False	NA	28	True	AATAAA	-13	NA	73232636	73248874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_42899.known	chr17	-	2865	4	FSM	ENSG00000133193.13	ENST00000405159.8	2876	4	23	-12	-4	0	multi-exon	FALSE	canonical	3	112	junction_2	156.610628275634	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	-1	True	ATTAAA	-28	NA	73232371	73207352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73209769_73212677_73212741_73227164_73227265_73232085
transcript_429.known	chr1	-	2641	19	FSM	ENSG00000157881.16	ENST00000378466.9	2641	19	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_4	20.5439156232643	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	6	True	NA	-9	True	AATAGA	-14	NA	2526596	2508536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510783_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_42905.known	chr17	-	2798	3	FSM	ENSG00000133193.13	ENST00000403627.7	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	20.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	-1	True	ATTAAA	-28	NA	73232367	73207352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73209769_73227164_73227265_73232085
transcript_42908.known	chr17	-	512	2	FSM	ENSG00000133193.13	ENST00000581110.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCTACAGCACCGAG	NA	False	NA	NA	False	NA	NA	NA	73232394	73209565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73209769_73232085
transcript_42910.known	chr17	-	3098	2	FSM	ENSG00000179604.10	ENST00000335793.4	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGTGTCTGTCTCTGC	-1	True	NA	-2	True	ATTAAA	-18	NA	73312001	73283623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_73286613_73311892
transcript_42912.known	chr17	+	431	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_1	5378.79602583143	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCGTCTTTGCGGA	NA	False	NA	15	True	ATTAAA	-17	NA	74203581	74209880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_42914.known	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5699.43179185434	5184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	9	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
transcript_42918.known	chr17	+	532	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	10545	junction_3	1626.41575933776	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	20	False	NA	31	True	ATTAAA	-33	NA	74203703	74209896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
transcript_42919.known	chr17	+	576	3	FSM	ENSG00000172809.13	ENST00000529123.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	9748	junction_1	2255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCGAGCACGGCACACT	-9	True	NA	NA	False	AATAAA	-22	NA	74203674	74204593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74203746_74203917_74203959_74204129
transcript_4292.known	chr1	+	1010	7	FSM	ENSG00000152760.10	ENST00000528352.1	1010	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.43989302878722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTTATTAAATATTTGT	5	True	NA	NA	False	NA	NA	NA	66752494	66777701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66752585_66754655_66754778_66770386_66770479_66770578_66770646_66775513_66775577_66776278_66776404_66777250
transcript_42920.known	chr17	+	3433	14	FSM	ENSG00000141540.11	ENST00000269346.9	3433	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	4.46286452441855	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTTCCGTTTCTGACT	10	True	NA	NA	False	AATAAA	-16	NA	74213570	74262020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74213717_74222484_74222658_74230887_74231000_74237293_74237515_74243373_74243470_74243976_74244050_74249010_74249081_74249343_74249400_74249935_74250029_74250264_74250358_74252233_74252377_74253080_74253267_74253754_74253834_74260128
transcript_42921.known	chr17	+	2292	14	FSM	ENSG00000171595.14	ENST00000311014.11	2292	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.266469355010597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGTACGTGTGATGC	0	True	NA	NA	False	ATTAAA	-19	NA	74274233	74314884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74274346_74281806_74282001_74285039_74285202_74286976_74287099_74289593_74289737_74291019_74291134_74299717_74299858_74301045_74301169_74305218_74305443_74309252_74309389_74310016_74310164_74312002_74312231_74314120_74314272_74314588
transcript_42922.known	chr17	+	1813	4	FSM	ENSG00000170412.18	ENST00000392627.7	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6167322834318	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	-15	True	NA	27	True	AATAAA	-20	NA	74432087	74447429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848
transcript_42923.nic	chr17	+	1797	4	NIC	ENSG00000170412.18	novel	2317	4	NA	NA	353	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	39.7520090337862	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	2	True	NA	27	True	AATAAA	-20	NA	74432485	74447429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_74432524_74439744_74440828_74443817_74443913_74446848
transcript_42925.known	chr17	+	1592	4	FSM	ENSG00000170412.18	ENST00000481232.2	1592	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	82.4135911121461	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	161	False	NA	27	True	AATAAA	-20	NA	74431527	74447429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74432142_74439744_74440047_74443817_74443913_74446848
transcript_42926.known	chr17	+	393	3	FSM	ENSG00000170412.18	ENST00000582873.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGACTCTCCAGGCTC	20	False	NA	NA	False	NA	NA	NA	74443076	74447088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74443135_74443817_74443913_74446848
transcript_42927.known	chr17	+	1638	7	FSM	ENSG00000167851.15	ENST00000360141.8	1638	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.26691175145591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	-26	True	NA	21	True	AGTAAA	-16	NA	74466633	74484794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74466744_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_42928.nnic	chr17	+	1750	5	NIC	ENSG00000167851.15	novel	1638	7	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	2.38484800354236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	1409	False	NA	21	True	AGTAAA	-16	NA	74466375	74484794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_74466744_74473535_74473875_74474531_74474686_74477435_74477531_74484000
transcript_42929.known	chr17	+	2613	9	FSM	ENSG00000172794.20	ENST00000392613.10	2613	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.26468052730799	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	4	True	NA	21	True	ATTAAA	-21	NA	74737255	74747335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_42930.known	chr17	+	1993	6	FSM	ENSG00000109062.12	ENST00000262613.10	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_1	30.8259630830896	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCCTCCGTGTGTT	-1	True	NA	37	True	NA	NA	NA	74748627	74769353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74749288_74762011_74762174_74763366_74763521_74766935_74766977_74768146_74768237_74768467
transcript_42931.known	chr17	+	2528	8	FSM	ENSG00000172794.20	ENST00000392612.7	2528	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.23834069384271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	7	True	NA	21	True	ATTAAA	-21	NA	74737229	74747335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74737366_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_42932.known	chr17	+	2858	8	FSM	ENSG00000172794.20	ENST00000392610.5	2858	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.46757022031768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	9	True	NA	21	True	ATTAAA	-21	NA	74737231	74747335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007
transcript_42939.nic	chr17	-	1868	7	NIC	ENSG00000109065.12	novel	1907	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	80.9246906423222	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	3647	False	NA	-1	True	TATAAA	-38	NA	74776386	74770528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_74771859_74771959_74771978_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_4294.known	chr1	+	2262	5	FSM	ENSG00000152760.10	ENST00000282670.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.06201920231798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCTATTGTAACAATG	0	True	NA	NA	False	AATAAA	-30	NA	66752458	66779047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66752585_66754655_66754778_66770386_66770479_66776278_66776404_66777250
transcript_42940.known	chr17	-	583	7	FSM	ENSG00000109065.12	ENST00000583476.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	86.0731278235741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAGAAGCCTTACAGA	10	True	NA	NA	False	NA	NA	NA	74776337	74771767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74771978_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_42945.nic	chr17	-	1930	7	NIC	ENSG00000109065.12	novel	1907	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	68.0206259568049	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	3647	False	NA	-1	True	TATAAA	-38	NA	74776386	74770528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_74771859_74771959_74772040_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42946.known	chr17	-	1011	7	FSM	ENSG00000109065.12	ENST00000581136.5	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	75.4889616654868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCTTTCTCCTTAGAG	23	True	NA	NA	False	NA	NA	NA	74776324	74771388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772040_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_42950.known	chr17	-	1860	7	FSM	ENSG00000109065.12	ENST00000580301.5	1860	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	27.8607649252892	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAACATTATAAAACGAA	8	True	NA	-39	True	AAAACA	-14	NA	74776339	74770566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42953.known	chr17	-	1907	7	FSM	ENSG00000109065.12	ENST00000357814.8	1907	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	50.7181755718138	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	2	True	NA	-1	True	TATAAA	-38	NA	74776345	74770528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_42954.known	chr17	-	839	7	FSM	ENSG00000109065.12	ENST00000578822.5	839	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	84.9027221131468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGGGTGTTGGGCCC	-2	True	NA	NA	False	NA	NA	NA	74776298	74771694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775853_74776266
transcript_42962.known	chr17	-	1993	6	FSM	ENSG00000109065.12	ENST00000583834.5	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_4	22.2387049982682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCTCAGTATAAAACAAA	24	True	NA	-53	True	NA	NA	NA	74776323	74770580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771859_74771959_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42967.nic	chr17	-	2226	6	NIC	ENSG00000109065.12	novel	1103	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	60	junction_2	69.5689585950516	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	3647	False	NA	-1	True	TATAAA	-38	NA	74776386	74770528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_74771859_74771959_74772396_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42968.nic	chr17	-	2229	6	NIC	ENSG00000109065.12	novel	1907	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	60	junction_2	77.6340131643341	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	3647	False	NA	-1	True	TATAAA	-38	NA	74776386	74770528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_74771859_74771959_74772396_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_4297.known	chr1	-	1520	6	FSM	ENSG00000152763.17	ENST00000371022.3	1520	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.74355957741627	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTACAAGCAAAGTTATA	-18	True	NA	NA	False	NA	NA	NA	66924846	66870804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_66871510_66874780_66874938_66891153_66891267_66893228_66893414_66905200_66905376_66924661
transcript_42970.known	chr17	-	583	6	FSM	ENSG00000109065.12	ENST00000583757.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	73.9394346746038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGCTGGGCCTTGTGG	5	True	NA	NA	False	NA	NA	NA	74776342	74771727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771835_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_42973.known	chr17	-	573	6	FSM	ENSG00000109065.12	ENST00000582524.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	80.7375996670696	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCCTTACAGAGATG	-18	True	NA	NA	False	NA	NA	NA	74776365	74771763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74771835_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_4298.known	chr1	+	1728	15	FSM	ENSG00000198160.15	ENST00000371014.5	1728	15	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	32.3520967367697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	66924958	66986670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_42987.known	chr17	+	4703	10	FSM	ENSG00000109066.14	ENST00000335464.10	4703	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	16.3646713726797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTCCCACATCACTCA	-11	True	NA	30	True	AATAAA	-15	NA	74776498	74839753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74835926
transcript_42988.known	chr17	+	1740	10	FSM	ENSG00000109066.14	ENST00000582773.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	41.7692071587032	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	-10	True	NA	28	True	AATAAA	-13	NA	74776499	74839751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
transcript_42994.nic	chr17	+	1007	5	ISM	ENSG00000109066.14	ENST00000582773.5	1740	10	-25	48964	-24	-4802	5prime_fragment	FALSE	canonical	3	108	junction_1	17.1081121109256	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACTGTGTTAAACCA	7498	False	NA	NA	False	NA	NA	NA	74776474	74790787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199
transcript_42999.known	chr17	-	1766	12	FSM	ENSG00000161513.12	ENST00000582944.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	52.0374944289815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGGTTGGGAACATG	1	True	NA	-50	True	NA	NA	NA	74872985	74862543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866877_74872035_74872134_74872865
transcript_43.known	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00116_+_0_2000
transcript_43000.known	chr17	-	2482	12	FSM	ENSG00000161513.12	ENST00000578473.5	2482	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	62.7598071095646	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGTTGATGGGGGA	11	False	74873017	-5	True	AATAAA	-15	NA	74873006	74862498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872242
transcript_43001.known	chr17	-	1846	12	FSM	ENSG00000161513.12	ENST00000293195.10	1846	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	19.0141313260071	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGTTGATGGGGGACT	-8	True	NA	-3	True	AATAAA	-17	NA	74872994	74862496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_43002.known	chr17	-	1827	12	FSM	ENSG00000161513.12	ENST00000581530.5	1827	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	53.4930288190097	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCATGGTTGATGGGG	56	False	NA	-7	True	AATAAA	-13	NA	74872961	74862500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864950_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_43003.known	chr17	-	1762	11	FSM	ENSG00000161513.12	ENST00000583917.5	1762	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	66.1528533020307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACAGCTGCAACCAAG	2	True	NA	-24	True	NA	NA	NA	74873015	74862517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864346_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872865
transcript_43006.known	chr17	-	1705	11	FSM	ENSG00000161513.12	ENST00000420580.6	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	65.2476053200422	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGTTGATGGGGGAC	12	True	NA	-4	True	AATAAA	-16	NA	74872974	74862497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866783_74866880_74872035_74872134_74872865
transcript_43011.known	chr17	-	2174	6	FSM	ENSG00000172782.13	ENST00000612771.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.72046505340853	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATAACTTTGAATGT	14	True	NA	NA	False	AATAAA	-40	NA	74893633	74877301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74878478_74879403_74879584_74881067_74881256_74882529_74882711_74892522_74892690_74893351
transcript_43012.known	chr17	-	3298	19	FSM	ENSG00000167861.16	ENST00000425042.7	3298	19	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	16.9779268463496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGTGGTTGAGG	-2	True	NA	-5	True	AATAAA	-16	NA	74972759	74950741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_43014.nic	chr17	-	1758	12	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-12	7227	0	0	5prime_fragment	FALSE	canonical	3	80	junction_2	12.1824965889794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTATCTATCATCAT	-14	True	NA	NA	False	ATTAAA	-27	NA	74972771	74957968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_43015.nic	chr17	-	1119	6	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-12	10855	0	0	5prime_fragment	FALSE	canonical	3	85	junction_3	12.6901536633722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAGTTAAAAA	-14	True	NA	NA	False	AATAGA	-24	NA	74972771	74961596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_43016.nic	chr17	-	2100	5	NIC	ENSG00000167861.16	novel	3298	19	NA	NA	0	323	intron_retention	FALSE	canonical	3	94	junction_3	10.8282039138539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATACAATAATTAA	-14	True	NA	NA	False	NA	NA	NA	74972771	74961273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_74961990_74962233_74962341_74962964_74963911_74964482_74964633_74972590
transcript_43018.known	chr17	+	593	6	FSM	ENSG00000167862.10	ENST00000584208.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	100.511889843938	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGCTGAGACAAAAGAG	-5	True	NA	NA	False	AAAACA	-9	NA	75012669	75020939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020466_75020658_75020920
transcript_43019.known	chr17	+	894	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	20.448960853794	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	-5	True	NA	11	True	AATAAA	-13	NA	75012669	75021261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
transcript_43027.known	chr17	-	609	6	FSM	ENSG00000167863.12	ENST00000301587.9	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	2482	junction_5	245.353133258982	2532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-1	True	NA	-18	True	ATTAAA	-16	NA	75046969	75038862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75039064_75039208_75039272_75040091_75040164_75042180_75042278_75042528_75042660_75046924
transcript_4303.known	chr1	+	5456	14	FSM	ENSG00000198160.15	ENST00000401041.6	5456	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	33.1550062263578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	-9	True	NA	NA	False	ATTAAA	-17	NA	66924989	66988619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_43033.known	chr17	-	553	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1242.25822597397	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-17	False	NA	-18	True	ATTAAA	-16	NA	75046985	75038862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
transcript_43038.nic	chr17	+	1658	5	ISM	ENSG00000170190.16	ENST00000450736.6	2051	6	4688	-11	270	0	3prime_fragment	FALSE	canonical	3	55	junction_4	17.3403431338598	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	117	False	NA	NA	False	AATAAA	-22	NA	75093625	75106162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_43041.known	chr17	-	901	5	FSM	ENSG00000125458.7	ENST00000245552.7	901	5	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	17.1664644001029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	17	True	NA	-5	True	AATAAA	-17	NA	75131742	75130227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180_75131282_75131533
transcript_43042.known	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	215.146978185198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	4484	False	NA	-48	True	AATACA	-4	NA	75131473	75130270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
transcript_43043.known	chr17	-	860	4	FSM	ENSG00000125458.7	ENST00000582160.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	14.1970262926979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGACCCTTTATTTGG	4511	False	NA	-2	True	AATAAA	-20	NA	75131446	75130224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180
transcript_43044.known	chr17	+	1204	3	FSM	ENSG00000125449.7	ENST00000582136.5	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	21	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCTCTTGTGTTTAT	17	True	NA	12	True	AATGAA	-27	NA	75109977	75114826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75110380_75110462_75110607_75114168
transcript_43045.known	chr17	+	445	3	FSM	ENSG00000125449.7	ENST00000584947.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTGTTTATTATG	138	False	NA	16	True	AATGAA	-31	NA	75110180	75114830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75110380_75110462_75110607_75114728
transcript_43046.known	chr17	+	2151	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	8	True	NA	78	True	ATTAAA	-21	NA	75109968	75130272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75110380_75110462_75110607_75128676
transcript_43047.known	chr17	-	776	3	FSM	ENSG00000125458.7	ENST00000577523.5	776	3	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAAGCGCTGTGCTACCG	4532	False	NA	NA	False	NA	NA	NA	75131425	75130362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75130643_75130752_75130868_75131044
transcript_43049.known	chr17	-	1633	6	FSM	ENSG00000189159.16	ENST00000304834.11	1633	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	901.406678475371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTACTTCACAATCCT	NA	False	NA	-64	True	NA	NA	NA	75154675	75135306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75149090_75149186_75154341
transcript_43052.known	chr17	-	1434	5	FSM	ENSG00000189159.16	ENST00000409753.8	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_4	50.5123747214482	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTACTGTGTCTTCT	0	True	NA	-5	True	AGTAAA	-20	NA	75154512	75135247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75154341
transcript_43054.known	chr17	-	517	5	FSM	ENSG00000189159.16	ENST00000581874.1	517	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	785.925052088302	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCCTGCTGCGCCTGT	0	True	NA	NA	False	NA	NA	NA	75154512	75136200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75136251_75146665_75146685_75147519_75147654_75148528_75148672_75154341
transcript_43061.known	chr17	-	1519	4	FSM	ENSG00000189159.16	ENST00000356033.8	1519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	846.996786036143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTACTTCACAATCCT	NA	False	NA	-64	True	NA	NA	NA	75154675	75135306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75136251_75147555_75147654_75148528_75148672_75154341
transcript_43062.known	chr17	-	490	4	FSM	ENSG00000188612.12	ENST00000578238.2	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	1971.36314936307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAAGATTACATTCTCA	-2	True	NA	NA	False	NA	NA	NA	75182563	75168297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182381
transcript_43064.known	chr17	-	3166	4	FSM	ENSG00000188612.12	ENST00000420826.7	3166	4	0	0	0	0	multi-exon	FALSE	canonical	3	3479	junction_3	432.653055769478	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTATTATGTGTTA	4	True	NA	-7	True	AATATA	-17	NA	75182959	75165585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182813
transcript_4307.known	chr1	+	1648	14	FSM	ENSG00000198160.15	ENST00000401042.7	1648	14	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_1	20.0673422468465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	-24	True	NA	NA	False	NA	NA	NA	66930242	66986670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_43075.known	chr17	+	2133	19	FSM	ENSG00000125450.11	ENST00000245544.9	2133	19	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	55.3016698785672	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTAGAGTCCACCCAG	-27	True	NA	36	True	AATAAA	-19	NA	75205678	75235758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_4308.known	chr1	+	4818	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	19.3238123107792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTGCTATCGATGG	-24	True	NA	17	True	AATAAA	-18	NA	66930242	66988030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_43090.known	chr17	+	1890	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	116.951029292585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	14	True	NA	-31	True	NA	NA	NA	75205719	75235691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_43094.known	chr17	+	2010	18	FSM	ENSG00000125450.11	ENST00000579324.5	2010	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	119.331007174818	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	1	True	NA	35	True	AATAAA	-18	NA	75205706	75235757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_43098.known	chr17	+	2233	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	118.266647876737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	14	True	NA	-12	True	NA	NA	NA	75205719	75235710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
transcript_431.known	chr1	+	2747	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	75.4939291157463	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGCTTTCTTCTTT	-31	True	NA	19	True	AATAAA	-19	NA	2586776	2591468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_43110.known	chr17	-	3871	17	FSM	ENSG00000125447.18	ENST00000537686.6	3871	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	45.7506403643709	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	4	True	NA	-5	True	AATAAA	-16	NA	75261606	75236598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_43112.known	chr17	-	3766	16	FSM	ENSG00000125447.18	ENST00000538886.5	3766	16	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	74.3001719752758	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	10	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75246508_75246585_75246711_75246797_75261547
transcript_43116.known	chr17	-	1358	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	69.3821943216622	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGCTTCCTTTATAT	-5	True	NA	NA	False	AATAAA	-14	NA	75271173	75266232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
transcript_43117.known	chr17	-	1419	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	62.8667020148363	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCTGATACTAAAAC	8	True	NA	NA	False	NA	NA	NA	75271227	75266246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
transcript_43118.nic	chr17	+	1203	6	NIC	ENSG00000125445.11	novel	731	5	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	3	87	junction_5	510.940466199341	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGGTGTGACTTGTGC	611	False	NA	14	True	TATAAA	-6	NA	75261640	75266363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701_75265967_75266192
transcript_4312.known	chr1	+	3875	16	FSM	ENSG00000198160.15	ENST00000371018.7	3875	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	42.1220449012945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	66924894	66988619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_66925096_66926141_66926243_66928889_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984653_66986402
transcript_43123.known	chr17	-	1319	6	FSM	ENSG00000125457.15	ENST00000325102.13	1319	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	34.1561121909388	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	4	True	NA	NA	False	AATAAA	-19	NA	75271231	75266227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75271143
transcript_43127.known	chr17	+	1204	5	FSM	ENSG00000125445.11	ENST00000245539.11	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_3	48.442620697068	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTCTGCCTCCACCC	-6	True	NA	27	True	TATAAA	-19	NA	75261878	75266376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701
transcript_43129.known	chr17	+	864	5	FSM	ENSG00000125445.11	ENST00000583407.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	578.656417919995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGGCTGGAACTTGCT	76	False	NA	49	True	AAGAAA	-39	NA	75261960	75266084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75261984_75262462_75262689_75262803_75262868_75263339_75263508_75265701
transcript_4313.nnic	chr1	+	880	9	Fusion	ENSG00000289394.1_ENSG00000198160.15	novel	473	2	NA	NA	-56	3069	multi-exon	FALSE	canonical	3	8	junction_1	49.1826951274531	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAAAAAGGTGGGTT	229	False	NA	NA	False	NA	NA	NA	66925270	66963147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_66925382_66926141_66926243_66928886_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_43132.known	chr17	-	952	5	FSM	ENSG00000125457.15	ENST00000580571.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	62.8664258567321	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAGCCACTGGTGGG	8	True	NA	NA	False	NA	NA	NA	75271227	75266434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75266968_75267537_75267631_75268082_75268193_75270113_75270246_75271143
transcript_43135.known	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_2	39.6063967897443	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	27	False	NA	17	True	NA	NA	NA	75261911	75266330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
transcript_43137.nnic	chr17	-	1642	8	NNC	ENSG00000125454.12	novel	1630	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.1458796615264	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	1	True	NA	-16	True	ATTAAA	-13	NA	75289416	75272991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75286914_75287034_75289353
transcript_43138.known	chr17	-	1554	8	FSM	ENSG00000125454.12	ENST00000580994.5	1554	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	37.3592597051158	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAACCTATTTAATAGAC	6	True	NA	-54	True	NA	NA	NA	75289411	75273029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_43140.known	chr17	-	1630	8	FSM	ENSG00000125454.12	ENST00000416858.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	55.8452672797885	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-16	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288501_75288592_75289353
transcript_43142.known	chr17	-	1496	7	FSM	ENSG00000125454.12	ENST00000442286.6	1496	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	33.304987948087	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTATCTTACTCCATC	27	True	NA	-17	True	ATTAAA	-12	NA	75289390	75272992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75289353
transcript_43143.nic	chr17	-	1464	7	NIC	ENSG00000125454.12	novel	1554	8	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	5	junction_3	54.4806285654717	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-37	False	NA	-16	True	ATTAAA	-13	NA	75289454	75272991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_43144.known	chr17	-	693	6	FSM	ENSG00000125454.12	ENST00000583332.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	49.6330535026811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGAAGGCTGCCCTCT	31	True	NA	NA	False	NA	NA	NA	75289386	75273550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75273640_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_43145.nic	chr17	-	1380	6	NIC	ENSG00000125454.12	novel	1630	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	53.794423502813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-26	True	NA	-16	True	ATTAAA	-13	NA	75289443	75272991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75289353
transcript_43148.nic	chr17	-	1226	5	NIC	ENSG00000125454.12	novel	693	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	54.9954543576103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCTCCCCTGGCACAT	-5	True	NA	-4	True	ATTAAA	-25	NA	75289422	75272979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75273640_75283422_75283594_75286303_75286460_75286632_75286803_75289353
transcript_43149.known	chr17	-	3273	6	FSM	ENSG00000177885.15	ENST00000316804.10	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_5	105.915815627318	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	5	True	NA	-6	True	AATAAA	-19	NA	75405678	75318075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550_75393766_75405488
transcript_43151.known	chr17	-	3182	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	67.3772031179686	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-22	True	NA	-6	True	AATAAA	-19	NA	75393864	75318075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
transcript_43156.known	chr17	-	1612	10	FSM	ENSG00000177303.10	ENST00000581870.1	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	8.20568908339411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAGTGGAGCTGTGAT	10004	False	NA	NA	False	AATAAA	-43	NA	75515440	75505318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_4316.nic	chr1	+	738	7	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	11	23523	11	3069	5prime_fragment	FALSE	canonical	3	65	junction_1	21.7689891563409	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAAAAAGGTGGGTT	-13	True	NA	NA	False	NA	NA	NA	66930253	66963147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_43160.known	chr17	-	4969	20	FSM	ENSG00000177303.10	ENST00000321617.8	4969	20	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	11.71688177629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTGTGTTTGCCTC	-12	True	NA	0	True	AATGAA	-18	NA	75515537	75500260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75501171_75501467_75501691_75501778_75503255_75503388_75503528_75503658_75503761_75503851_75503963_75504214_75504307_75504419_75504481_75504571_75504694_75504811_75505074_75505556_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_43161.known	chr17	+	3553	26	FSM	ENSG00000073350.14	ENST00000392550.8	3553	26	0	0	0	0	multi-exon	TRUE	canonical	3	302	junction_25	77.5882877759266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCCACTACTTTAATAT	-20	True	NA	16	True	AATAAA	-18	NA	75525696	75575209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574870
transcript_43163.nic	chr17	+	1380	10	NIC	ENSG00000073350.14	novel	3527	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.062619782437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGGCACGTACCTGTA	8075	False	NA	11	True	AATAAA	-14	NA	75525076	75564723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_75525175_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
transcript_43166.known	chr17	-	3669	20	FSM	ENSG00000108469.15	ENST00000317905.10	3669	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	24.3662042870313	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-6	True	NA	-16	True	AATAAA	-36	NA	75667154	75626853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_4317.known	chr1	-	6193	12	FSM	ENSG00000116704.8	ENST00000235345.6	6193	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	5.04197259049529	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGACTAATCCAGAGC	2	True	NA	-9	True	AATAAA	-45	NA	67054148	66999349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67004449_67009084_67009168_67020368_67020448_67021534_67021603_67042235_67042329_67047264_67047368_67049781_67049851_67050432_67050505_67052011_67052080_67052770_67052858_67052955_67052990_67053810
transcript_43171.known	chr17	-	1749	9	FSM	ENSG00000108469.15	ENST00000340830.9	1749	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	40.8044115262063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTGTGTGTTTTTAT	-6	True	NA	NA	False	AAAAAG	-21	NA	75667189	75650358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75650719_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_43172.known	chr17	+	1140	2	FSM	ENSG00000259120.3	ENST00000579469.2	1140	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGTGAGAGCTCATTT	1	True	NA	9	True	AATAAA	-20	NA	75646250	75647974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75646787_75647370
transcript_43174.known	chr17	+	1000	12	FSM	ENSG00000161526.15	ENST00000583536.5	1000	12	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_3	275.052001093948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACCGTGCAGCCCAGT	28	False	NA	NA	False	NA	NA	NA	75667425	75706545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75690670_75690773_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_43176.known	chr17	+	2500	11	FSM	ENSG00000161526.15	ENST00000584667.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_5	41.8168626274138	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTTGTTGGCTAAAT	-12	True	NA	21	True	TATAAA	-18	NA	75667337	75708059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_43182.known	chr17	+	2409	10	FSM	ENSG00000161526.15	ENST00000582022.5	2409	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	234.109713648732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTTGGCTAAATCCA	21	True	NA	24	True	TATAAA	-21	NA	75667370	75708062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_43183.known	chr17	+	2439	10	FSM	ENSG00000161526.15	ENST00000355423.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	204.285626718941	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTTTTTTGTTGGC	-4	True	NA	16	True	TATAAA	-13	NA	75667345	75708054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_43187.known	chr17	-	1397	8	FSM	ENSG00000108479.13	ENST00000588479.6	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	16.1637033541961	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	-19	True	NA	31	True	NA	NA	NA	75765192	75757893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_43190.known	chr17	+	1312	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	7.76029781788188	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	14	True	NA	27	True	ATTAAA	-27	NA	75784854	75794198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
transcript_43194.known	chr17	-	2705	4	FSM	ENSG00000132475.10	ENST00000254810.8	2705	4	0	0	0	0	multi-exon	TRUE	canonical	3	13122	junction_3	1175.04392352891	3099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTCATTTCTCAATG	-2	True	NA	-12	True	AATAAA	-15	NA	75779779	75776433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779656
transcript_43199.known	chr17	-	783	4	FSM	ENSG00000132475.10	ENST00000591890.5	783	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6795.12222112303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTAGCTATTAAGGTAC	5784	False	NA	-97	True	NA	NA	NA	75779759	75778324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778724_75778820_75778964_75779046_75779185_75779656
transcript_432.known	chr1	+	2689	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	89.6519504652421	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	-10	True	NA	14	True	AATAAA	-14	NA	2586797	2591463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_4320.known	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1147.13107981857	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	31	False	NA	-32	True	AATAAA	-34	NA	67430386	67411037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_43201.known	chr17	+	984	3	FSM	ENSG00000132478.10	ENST00000587501.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	51.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGAAGTAAGAGTACTT	8	True	NA	4	True	ATTAAA	-22	NA	75784848	75794124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75784985_75792312_75792479_75793442
transcript_43202.known	chr17	-	586	3	FSM	ENSG00000132475.10	ENST00000587171.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	13122	junction_2	1153.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCCAGTTGGCTCGCC	-1	True	NA	-152	True	NA	NA	NA	75779778	75778637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778964_75779046_75779185_75779656
transcript_43206.known	chr17	-	576	4	FSM	ENSG00000132475.10	ENST00000589599.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7353.07640832507	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	-3	True	NA	-88	True	NA	NA	NA	75779780	75778573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779646
transcript_43207.nic	chr17	-	1784	9	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-61	0	intron_retention	FALSE	canonical	3	20	junction_8	11.9687092035858	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTGGCCTACAGTG	9577	False	NA	-16	True	AATAAA	-25	NA	75833330	75827224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75828087_75828786_75828984_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_43208.nnic	chr17	-	1587	8	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-61	0	intron_retention	FALSE	canonical	3	6	junction_1	18.4689480159625	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTGGCCTACAGTG	9577	False	NA	-16	True	AATAAA	-25	NA	75833330	75827224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75828087_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_43209.nnic	chr17	+	1285	3	Antisense	novelGene_ENSG00000092929.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTTCTCTGTTTTAAAT	NA	False	NA	NA	False	AATACA	-19	NA	75830600	75833433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr17_+_75830747_75831248_75831316_75832361
transcript_4321.known	chr1	-	1621	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1128.55848093839	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	45	False	NA	NA	False	AATATA	-24	NA	67430372	67412866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_43217.known	chr17	-	1859	8	FSM	ENSG00000132471.12	ENST00000254806.8	1859	8	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	54.8214169381095	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTCTGGCTCTGCGTGT	-13	True	NA	-6	True	AGTAAA	-16	NA	75855335	75845698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_4322.known	chr1	+	1352	4	FSM	ENSG00000116717.13	ENST00000370986.9	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	12.2836838484589	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	1	True	NA	14	True	AATAAA	-22	NA	67685200	67688334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_67685539_67686024_67686127_67686349_67686588_67687660
transcript_43220.nic	chr17	-	1707	7	NIC	ENSG00000132471.12	novel	2225	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_6	186.713461396512	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTGCTGAAAATGTG	-15	True	NA	-12	True	AATAAA	-17	NA	75855337	75845743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75855238
transcript_43222.known	chr17	-	928	7	FSM	ENSG00000132471.12	ENST00000433525.6	928	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	203.536032845948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCTTCTGGGAGCACG	-13	True	NA	NA	False	NA	NA	NA	75855335	75846494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_43225.known	chr17	-	1907	6	FSM	ENSG00000132481.7	ENST00000587339.2	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	12.7027556065603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	416	False	NA	NA	False	AATAAA	-16	NA	75878196	75874163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877850
transcript_43226.known	chr17	-	2269	6	FSM	ENSG00000132481.7	ENST00000254816.6	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.83321838943783	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	2	True	NA	NA	False	AATAAA	-16	NA	75878581	75874163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877873
transcript_43230.known	chr17	-	1358	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_1	26.0612259880459	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	13	True	NA	-11	True	AATAAA	-18	NA	75904884	75898643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
transcript_43239.known	chr17	-	7317	14	FSM	ENSG00000161533.12	ENST00000293217.10	7317	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	20.1896335225568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTAATCTTTTTGTG	-14	True	NA	0	True	AATAAA	-39	NA	75979166	75941506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75960214_75960376_75978533_75978694_75978964
transcript_4324.known	chr1	-	4395	4	FSM	ENSG00000172380.6	ENST00000370982.4	4395	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	8.05536398239638	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTCCCCTTTCCCTT	-5	True	NA	-25	True	AATAAA	-15	NA	67833467	67701474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_67705577_67707593_67707713_67777457_67777508_67833343
transcript_43240.known	chr17	-	2215	14	FSM	ENSG00000161533.12	ENST00000301608.8	2215	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	18.7446244759814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAAGTGCAATTAACA	18	True	NA	-23	True	ATTAAA	-15	NA	75979134	75946576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75973624_75973786_75978533_75978694_75978964
transcript_43254.known	chr17	+	974	4	FSM	ENSG00000257949.7	ENST00000397640.6	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	2.35702260395516	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCGTGGTGCAGCGC	-5	True	NA	13	True	AATAAA	-24	NA	75979239	76000586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140
transcript_43256.known	chr17	-	2124	20	FSM	ENSG00000182473.22	ENST00000634349.1	2124	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	243.491113672908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	7	True	NA	-109	True	NA	NA	NA	76103692	76083647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_43257.known	chr17	-	2031	19	FSM	ENSG00000182473.22	ENST00000411744.6	2031	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	216.040519747661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	7	True	NA	-109	True	NA	NA	NA	76103692	76083647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_43259.known	chr17	-	4782	19	FSM	ENSG00000182473.22	ENST00000589210.6	4782	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	205.853845131821	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGGGAGAAGTGGTC	-33	True	NA	-35	True	AATAAA	-20	NA	76103787	76081015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_43260.known	chr17	-	4596	18	FSM	ENSG00000182473.22	ENST00000332065.9	4596	18	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_12	59.1032174371132	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAGGGAGAAGTGGT	4	True	NA	-36	True	AATAAA	-19	NA	76103695	76081016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_43262.known	chr17	-	2831	16	FSM	ENSG00000167881.15	ENST00000307877.7	2831	16	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_5	90.8234918215913	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACACTTAACGATTCCC	-11	True	NA	-6	True	AATAAA	-18	NA	76072517	76038784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76070377_76070445_76072307
transcript_43265.known	chr17	-	1941	15	FSM	ENSG00000167881.15	ENST00000592704.5	1941	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	228.349579838118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCTTAAGCAGCGTGTC	9	True	NA	2	True	NA	NA	NA	76072497	76039550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76072344
transcript_43267.known	chr17	-	2958	6	FSM	ENSG00000182473.22	ENST00000405068.3	2958	6	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_2	67.5857973245859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11	True	NA	NA	False	NA	NA	NA	76103743	76092314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_43271.known	chr17	-	5677	19	FSM	ENSG00000129646.16	ENST00000636395.1	5677	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	8.21621402103829	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGGTGTGGCGAATCGT	278	False	NA	-4	True	AATAAA	-14	NA	76307998	76274048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76274244_76275818_76275948_76276679_76276768_76277162_76277311_76277988_76278190_76279040_76279143_76279362_76279429_76280032_76280155_76280286_76280452_76280653_76280729_76280830_76280954_76281863_76282116_76287191_76287307_76287799_76287898_76289991_76290078_76291014_76294022_76304414_76304526_76304881_76304942_76307464
transcript_43274.known	chr17	-	3435	10	FSM	ENSG00000161542.17	ENST00000446526.8	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	20.932578424699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTCTCAATTGTTAAC	-23	True	NA	NA	False	NA	NA	NA	76353916	76309477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_43277.known	chr17	-	1678	10	FSM	ENSG00000161542.17	ENST00000324684.8	1678	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	152.255632991945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAGTCTTTTCATTAG	-1	False	NA	-43	True	AATAAA	-13	NA	76354198	76310933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76354116
transcript_43281.nic	chr17	-	954	4	ISM	ENSG00000175931.13	ENST00000586409.5	3579	14	51868	4134	1368	297	internal_fragment	FALSE	canonical	3	191	junction_2	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAATAAAATCACT	NA	False	NA	-1	True	AAAAAG	-44	NA	76401273	76399491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_76399922_76400146_76400298_76400440_76400551_76401010
transcript_43284.known	chr17	-	1904	9	FSM	ENSG00000070731.11	ENST00000225276.10	1904	9	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_5	6.32331993497087	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGCGTCAGTAAATTTG	-18	True	NA	-2	True	AATAAA	-15	NA	76585860	76565376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76566272_76567452_76567553_76568712_76568797_76570564_76570669_76572636_76572776_76573194_76573364_76574364_76574540_76578755_76578817_76585683
transcript_43287.known	chr17	+	989	5	FSM	ENSG00000163597.16	ENST00000586942.7	993	5	3	1	0	-1	multi-exon	FALSE	canonical	3	50	junction_1	762.380810356609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTGTCTCCGCAGA	-2	True	NA	13	True	GATAAA	-4	NA	76557768	76563581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76557858_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_4329.nic	chr1	-	2083	12	NIC	ENSG00000116729.14	novel	2037	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	16.977379213491	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCTCTTACATCCA	NA	False	NA	-15	True	AATAAA	-17	NA	68232585	68098472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_43292.known	chr17	+	2407	3	FSM	ENSG00000163597.16	ENST00000493536.7	2437	3	3	27	0	-17	multi-exon	FALSE	canonical	3	39	junction_2	603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	-2	True	NA	-6	True	NA	NA	NA	76557768	76565321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76557858_76561287_76561403_76563118
transcript_43293.known	chr17	-	1950	5	FSM	ENSG00000182534.14	ENST00000375036.6	1950	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	146.499786689265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTGTTTTTTCAGT	-11	True	NA	-4	True	AATAAA	-21	NA	76711004	76679568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76680880_76683846_76683928_76685071_76685166_76688112_76688177_76710604
transcript_43294.known	chr17	-	5661	4	FSM	ENSG00000182534.14	ENST00000355797.7	5661	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	160.74202935138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAAGTTTACTTT	38	True	NA	NA	False	AATAAA	-24	NA	76710955	76672550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76677703_76685071_76685166_76688112_76688177_76710604
transcript_43295.known	chr17	-	1833	4	FSM	ENSG00000182534.14	ENST00000449428.7	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	54.1869192907497	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTTTTTCAGTTTG	28	True	NA	-1	True	AATAAA	-24	NA	76710965	76679565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76680880_76685071_76685166_76688112_76688177_76710604
transcript_43296.known	chr17	+	1717	1	FSM	ENSG00000261335.1	ENST00000565271.1	1717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTAGTATAATTAC	NA	False	NA	NA	False	AATAAA	-16	NA	76671941	76673658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76671900_76673700
transcript_43297.known	chr17	-	1898	7	FSM	ENSG00000070495.15	ENST00000542934.5	1898	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	59.7717882170733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-5	True	NA	-23	True	AATAAA	-24	NA	76726784	76718445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76718861_76720359_76720499_76721262_76721357_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_43298.known	chr17	-	1621	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	12.7216351150314	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAAATGTTTTCCTTT	7	True	NA	-28	True	AATAAA	-19	NA	76726606	76718450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_433.nnic	chr1	+	610	3	NNC	ENSG00000237058.1	novel	373	2	NA	NA	-3835	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTGTGGTTTCCATC	NA	False	NA	NA	False	ATTAAA	-16	NA	2628732	2636620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_2628904_2632501_2632676_2636355
transcript_4330.known	chr1	-	2716	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	7.99379924981113	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGCGTGCAGATTAT	-1	True	NA	-3	True	NA	NA	NA	68232523	68125359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_43302.known	chr17	+	2538	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	22.5645687597527	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGATAATTTTTTAAAA	18	True	NA	NA	False	AAAAAG	-12	NA	76737700	76779286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_43305.nnic	chr17	+	2037	14	NNC	ENSG00000092931.12	novel	2277	14	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	25.6263547772912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	-5	True	NA	19	True	TATAAA	-16	NA	76737677	76778727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_76737919_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_43308.known	chr17	+	1891	14	FSM	ENSG00000092931.12	ENST00000590514.5	1891	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.8378975201599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	48	True	NA	19	True	TATAAA	-16	NA	76738070	76778727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_43311.nnic	chr17	+	838	5	NNC	ENSG00000181038.14	novel	1128	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.1676883373175	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	735	False	NA	NA	False	ATTAAA	-17	NA	76726812	76733880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_76726880_76729689_76729778_76732977_76733216_76733292_76733378_76733520
transcript_43312.known	chr17	+	581	5	FSM	ENSG00000181038.14	ENST00000588563.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	68.4520817798845	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATGCTGGTCATTT	-3	True	NA	NA	False	NA	NA	NA	76726849	76733643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_43313.known	chr17	+	1184	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	71.175838597097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	-10	True	NA	NA	False	ATTAAA	-32	NA	76726842	76733936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_43314.nic	chr17	+	751	4	NIC	ENSG00000181038.14	novel	1128	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_1	76.1095701384962	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	734	False	NA	NA	False	ATTAAA	-17	NA	76726811	76733880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_76726880_76732977_76733216_76733292_76733378_76733520
transcript_43316.known	chr17	-	1888	3	FSM	ENSG00000161547.17	ENST00000359995.10	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	2084	junction_1	176	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	0	True	NA	-2	True	ATTAAA	-31	NA	76737331	76734114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_76735159_76736153_76736465_76736798
transcript_43318.known	chr17	+	2908	18	FSM	ENSG00000129657.16	ENST00000443798.8	2908	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	45.3752520082224	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	34	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77214020_77216548
transcript_43319.known	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	23.5981990838284	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	-29	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_4332.known	chr1	-	2332	11	FSM	ENSG00000116729.14	ENST00000370976.7	2332	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	23.3814028663808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGCTTAAAATGCGTT	6	True	NA	-18	True	ATTAAA	-30	NA	68232544	68125491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68232193
transcript_43321.nic	chr17	+	748	6	ISM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	23552	0	0	5prime_fragment	FALSE	canonical	3	135	junction_4	22.5335305711289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTATCTTGGGATTT	-29	True	NA	NA	False	ATTAAA	-4	NA	77140968	77193549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420
transcript_43322.nnic	chr17	+	2075	2	NNC	ENSG00000129657.16	novel	5500	17	NA	NA	2286	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	NA	False	NA	NA	False	AATAAA	-21	NA	77215000	77217101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_77216388_77216413
transcript_43323.known	chr17	+	603	4	FSM	ENSG00000234912.12	ENST00000561633.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	15.8394724940223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATTGAATTAAAATAA	31	True	NA	-31	True	AAAACA	-9	NA	77088748	77099196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77099017
transcript_43325.known	chr17	+	2185	3	FSM	ENSG00000234912.12	ENST00000434411.6	2185	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTCGTTCTCCTGTGTG	NA	False	NA	20	True	AATAAA	-20	NA	77088630	77094990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77088950_77089152_77089272_77093243
transcript_43326.known	chr17	+	849	2	FSM	ENSG00000234912.12	ENST00000366365.3	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATGAAACCCCATTTC	60	True	NA	NA	False	NA	NA	NA	77088777	77089829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77088950_77089152
transcript_43328.known	chr17	+	1338	4	FSM	ENSG00000234912.12	ENST00000566583.5	1338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.131126469709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTACTGACTCGTTCTC	31	True	NA	13	True	AATAAA	-13	NA	77088748	77094983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77094069
transcript_43329.known	chr17	+	1187	3	FSM	ENSG00000234912.12	ENST00000648740.1	1187	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTTTTTTTTAAC	49	True	NA	NA	False	AATAAA	-14	NA	77088766	77099902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77088950_77089152_77089272_77099017
transcript_4333.nic	chr1	-	1794	11	ISM	ENSG00000116729.14	ENST00000262348.9	2716	12	-62	12428	-40	4816	5prime_fragment	FALSE	canonical	3	62	junction_9	8.21218606705913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATGGTGAGTTTCTGT	NA	False	NA	NA	False	CATAAA	-18	NA	68232585	68137787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_43330.known	chr17	+	3733	12	FSM	ENSG00000184640.20	ENST00000427177.6	3733	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	215.076884196565	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	28	True	NA	33	True	AATAAA	-22	NA	77281498	77500593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77281555_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_43331.known	chr17	+	1691	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	145.644247787478	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCGCACTTGCAGAGGA	494	False	NA	NA	False	NA	NA	NA	77451243	77499024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_43332.nic	chr17	+	3143	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	184.679903256057	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	4124	False	NA	33	True	AATAAA	-22	NA	77466392	77500593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_43334.known	chr17	+	3026	10	FSM	ENSG00000184640.20	ENST00000541152.6	3026	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	195.80943116544	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	16	False	NA	34	True	AATAAA	-23	NA	77450736	77500594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_77450787_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_43335.known	chr17	-	8387	20	FSM	ENSG00000141524.17	ENST00000590602.6	8387	20	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_19	50.244885077531	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	-5	True	NA	2	True	AATAAA	-22	NA	78128755	78107396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_4334.known	chr1	-	2037	12	FSM	ENSG00000116729.14	ENST00000354777.6	2037	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.3908293459673	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCTCTTACATCCA	5	True	NA	-15	True	AATAAA	-17	NA	68232545	68098472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194222_68232193
transcript_43340.known	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_3	82.4311160235556	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	-4	True	NA	29	True	AATAAA	-15	NA	78168580	78172720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
transcript_43341.known	chr17	+	2239	4	FSM	ENSG00000108639.8	ENST00000590201.1	2239	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	462.713974526621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	9	True	NA	NA	False	NA	NA	NA	78169157	78173527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78169230_78170816_78171055_78171509_78171650_78171738
transcript_43342.known	chr17	+	1553	3	FSM	ENSG00000108639.8	ENST00000588282.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_2	84	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	26	False	NA	28	True	AATAAA	-14	NA	78168610	78172719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78168716_78170816_78171055_78171509
transcript_43343.known	chr17	+	2125	3	FSM	ENSG00000108639.8	ENST00000589168.1	2125	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	519	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	33	False	NA	NA	False	NA	NA	NA	78168617	78173527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78168716_78170816_78171055_78171738
transcript_43344.known	chr17	+	3036	1	FSM	ENSG00000108639.8	ENST00000592456.1	3036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	508	False	NA	28	True	AATAAA	-14	NA	78169683	78172719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78169700_78172700
transcript_43346.known	chr17	-	631	8	FSM	ENSG00000167900.12	ENST00000586613.1	631	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	466.343483816338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCACTCCGTGTGTCGG	321	False	NA	NA	False	NA	NA	NA	78187063	78174925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78183753_78183778_78185054_78185166_78186786_78186819_78186928
transcript_43347.known	chr17	-	642	7	FSM	ENSG00000167900.12	ENST00000590862.5	642	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	403.128046930776	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGCTGCCCAGCCACT	348	False	NA	NA	False	NA	NA	NA	78187036	78174701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78174789_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_43349.known	chr17	-	1431	7	FSM	ENSG00000167900.12	ENST00000301634.12	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	125.493691740528	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTGGACGCACATT	-3	True	NA	NA	False	NA	NA	NA	78187052	78174090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_4335.known	chr1	-	700	2	FSM	ENSG00000116729.14	ENST00000370971.1	700	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAGCAAACAATTATTG	-1	True	NA	NA	False	AATAAA	-17	NA	68232523	68193857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68194228_68232193
transcript_43354.known	chr17	-	1681	6	FSM	ENSG00000167900.12	ENST00000588734.5	1681	6	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_1	100.712263404215	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTATGAAATTAACTAAT	151	False	NA	NA	False	GGGGCT	-45	NA	78187233	78174120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_43355.known	chr17	-	683	5	FSM	ENSG00000167900.12	ENST00000590430.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	472.983284588367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGAAGCCGTGGCTGCC	346	False	NA	NA	False	NA	NA	NA	78187038	78174829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78175170_78175528_78175619_78185054_78185166_78186786_78186819_78186928
transcript_43357.known	chr17	+	778	7	FSM	ENSG00000183077.16	ENST00000588199.5	778	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	40.1265359692173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCTGCCTCTTAGACTC	1	True	NA	NA	False	NA	NA	NA	78187361	78207187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205439_78205519_78205945_78206051_78206910
transcript_43359.nic	chr17	+	1245	6	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	17.1510932596147	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	-1	True	NA	24	True	AATAAA	-17	NA	78187329	78207701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
transcript_43362.known	chr17	+	550	3	FSM	ENSG00000183077.16	ENST00000586731.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	52	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	40	False	NA	4	True	AATAAA	-17	NA	78187400	78197560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78197134
transcript_43363.known	chr17	+	582	3	FSM	ENSG00000183077.16	ENST00000591952.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGCAGTGGCGTGAT	1	True	NA	NA	False	NA	NA	NA	78187361	78207329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78206910
transcript_43364.known	chr17	+	578	3	FSM	ENSG00000183077.16	ENST00000589256.5	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	46	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	1	True	NA	4	True	AATAAA	-17	NA	78187361	78197560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78187434_78190969_78191061_78197145
transcript_43365.known	chr17	+	2711	5	FSM	ENSG00000089685.15	ENST00000301633.8	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	711.514054674959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-22	NA	78214185	78225636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78223464
transcript_4337.known	chr1	-	5299	12	FSM	ENSG00000024526.17	ENST00000456315.7	5299	12	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	24.7726855712743	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-7	True	NA	-9	True	ATTAAA	-17	NA	68497082	68474151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_43370.known	chr17	+	648	5	FSM	ENSG00000089685.15	ENST00000590925.6	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	842.665710706209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGGCCGGAGCTGCC	1	True	NA	NA	False	NA	NA	NA	78214262	78223554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78222827_78222993_78223464
transcript_43373.known	chr17	+	2574	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_3	267.253936671972	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	-9	True	NA	26	True	AATAAA	-21	NA	78214252	78225635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
transcript_43378.known	chr17	+	2446	3	FSM	ENSG00000089685.15	ENST00000374948.6	2446	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	2	True	NA	27	True	AATAAA	-22	NA	78214263	78225636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679_78214790_78223464
transcript_43382.known	chr17	+	568	2	FSM	ENSG00000089685.15	ENST00000590449.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	1758	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACAGTTTAATTGA	18	True	NA	NA	False	NA	NA	NA	78214279	78215099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78214428_78214679
transcript_43385.nnic	chr17	+	901	4	NNC	ENSG00000266970.2	novel	874	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	-4	True	NA	-13	True	CATAAA	-7	NA	78360416	78364905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_78360774_78361765_78361822_78362672_78362752_78364496
transcript_43386.nnic	chr17	+	828	4	NNC	ENSG00000266970.2	novel	490	2	NA	NA	860	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	23.6220236220354	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	865	False	NA	-13	True	CATAAA	-7	NA	78361320	78364905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_78361605_78361765_78361822_78362672_78362752_78364496
transcript_43387.nnic	chr17	+	423	3	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3331	699	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTGGGCTCTGCGTGA	5546	False	NA	10	True	AATAAA	-14	NA	78366001	78374610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_78366103_78367192_78367267_78374362
transcript_43389.known	chr17	+	2297	10	FSM	ENSG00000087157.19	ENST00000262764.11	2297	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	43.6348484585429	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	-5	True	NA	14	True	AATAAA	-18	NA	78378648	78424659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_43394.known	chr17	-	3286	13	FSM	ENSG00000108669.17	ENST00000591455.5	3286	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.1541031023364	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	22	True	NA	-1	True	AATAAA	-21	NA	78782272	78674047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_43395.known	chr17	-	3311	13	FSM	ENSG00000108669.17	ENST00000361101.8	3311	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	31.0881363581387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	0	True	NA	-1	True	AATAAA	-21	NA	78782294	78674047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692496_78698267_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_43397.known	chr17	-	3187	17	ISM	ENSG00000055483.20	ENST00000312010.10	5234	20	23	5578	8	924	5prime_fragment	FALSE	canonical	3	125	junction_2	23.52251248804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGACACAGCGGGCAG	573	False	78840893	NA	False	AAAAAG	-18	NA	78840864	78802460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_434.nic	chr1	+	1802	10	NIC	ENSG00000130762.15	novel	2340	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	65.1613382305796	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	0	True	NA	40	True	ATTAAA	-16	NA	3471623	3481113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_3471792_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
transcript_43401.known	chr17	-	602	4	FSM	ENSG00000055483.20	ENST00000588130.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	72.866697163763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGGTGCTTCCTTGT	6869	False	NA	1	True	AATACA	-24	NA	78799722	78787380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666
transcript_43402.known	chr17	-	2479	3	ISM	ENSG00000055483.20	ENST00000592231.6	5895	21	41830	1	6	0	3prime_fragment	FALSE	canonical	3	91	junction_1	33.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGTCTTTGTTGGT	7607	False	NA	-5	True	AATAAA	-17	NA	78798984	78795652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_78797903_78798399_78798552_78798907
transcript_43404.known	chr17	-	2202	6	FSM	ENSG00000108679.13	ENST00000262776.8	2202	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	36.1020775025482	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTGTACAGAAAGT	19	True	NA	-15	True	ATTAAA	-19	NA	78979923	78971254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_43405.known	chr17	-	3287	5	FSM	ENSG00000171302.17	ENST00000392446.10	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	33.8775368053818	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-12	True	NA	-10	True	AATAAA	-18	NA	79009764	78991715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_43407.known	chr17	-	3534	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	8.5764535535124	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTGTCTCCCGGTCT	NA	False	NA	-11	True	AATAAA	-17	NA	79009817	78991716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
transcript_43408.known	chr17	+	2886	4	FSM	ENSG00000173918.15	ENST00000579760.6	2886	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.10960933531265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTCGTCAGTTTGCT	7	True	NA	6	True	ATTAAA	-22	NA	79024168	79049788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_79024495_79043954_79044124_79046554_79046695_79047537
transcript_43409.known	chr17	+	2624	3	FSM	ENSG00000173918.15	ENST00000311661.4	2624	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCCTCGTCAGTTTGC	6	True	NA	5	True	ATTAAA	-21	NA	79024260	79049787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_79024495_79046554_79046695_79047537
transcript_43410.nic	chr17	-	522	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	946	0	164	0	3prime_fragment	FALSE	canonical	3	76	junction_1	11.0538454847171	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAAAGATG	NA	False	NA	9	True	AAAACA	-25	NA	79097562	79090815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_43411.nic	chr17	-	634	5	ISM	ENSG00000167281.20	ENST00000648001.1	2461	11	18047	1449	193	0	3prime_fragment	FALSE	canonical	3	17	junction_4	35.1238878827501	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAAAGATG	NA	False	NA	9	True	AAAACA	-25	NA	79097533	79090815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096834_79097291
transcript_43412.nic	chr17	-	1147	5	ISM	ENSG00000167281.20	ENST00000582894.5	611	6	164	-433	164	0	3prime_fragment	FALSE	canonical	3	19	junction_1	35.1745646739231	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCGACGTAGTCAC	NA	False	NA	-20	True	ATTAAA	-15	NA	79097562	79091946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_79092642_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_43414.nnic	chr17	+	4194	6	NNC	ENSG00000173894.11	novel	4628	5	NA	NA	15	405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	307.186848676827	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	3	True	NA	NA	False	AATAAA	-16	NA	79778177	79788388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79783731_79787564_79788372
transcript_43415.nnic	chr17	+	426	5	NNC	ENSG00000173894.11	novel	4628	5	NA	NA	15	405	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	326.574933973813	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	3	True	NA	NA	False	AATAAA	-16	NA	79778177	79788388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79788308
transcript_43416.known	chr17	+	567	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_2	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	-12	True	NA	20	True	GATAAA	-15	NA	79778162	79779739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_79778308_79778383_79778428_79779361
transcript_43417.known	chr17	-	3752	5	FSM	ENSG00000141570.11	ENST00000269385.9	3752	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	2.29128784747792	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTCTTGGTTTTATTC	-19	True	NA	NA	False	AATATA	-16	NA	79797077	79792131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_79795559_79796056_79796124_79796249_79796316_79796496_79796541_79796929
transcript_43418.known	chr17	-	10960	12	FSM	ENSG00000167291.16	ENST00000310924.7	10960	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	34.8640808315866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	0	True	NA	NA	False	AATAAA	-23	NA	80035872	79932342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_43419.known	chr17	-	6342	8	FSM	ENSG00000167291.16	ENST00000576768.5	6342	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	91.4727571800613	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTGTTCTTGGTATTT	-9	True	NA	-34	True	AATAGA	-20	NA	79950857	79935791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949824_79950410_79950579_79950755
transcript_43420.known	chr17	-	4244	8	FSM	ENSG00000167291.16	ENST00000340848.11	4244	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	77.5647195204477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTGCTAATGTCTGC	12	True	NA	-22	True	NA	NA	NA	79950836	79937907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79950755
transcript_43424.known	chr17	+	1970	11	FSM	ENSG00000141519.15	ENST00000269318.9	1970	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	8.9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAGTGAATATTTTA	4	True	NA	20	True	TATAAA	-15	NA	80036651	80067901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80067504
transcript_43425.nic	chr17	+	1991	9	ISM	ENSG00000141519.15	ENST00000269318.9	1970	11	-17	8398	3	-7267	5prime_fragment	FALSE	canonical	3	30	junction_1	4.38748219369606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATGAGTCACCATCT	-13	True	NA	NA	False	NA	NA	NA	80036634	80059503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857
transcript_43427.known	chr17	+	816	3	FSM	ENSG00000141519.15	ENST00000572083.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGGTGGCGCACGCCT	16	True	NA	NA	False	ACTAAA	-17	NA	80036663	80040535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80036692_80038122_80038187_80039811
transcript_43428.known	chr17	+	537	3	FSM	ENSG00000141519.15	ENST00000574099.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCAGAGCCATCCCAC	13	True	NA	NA	False	NA	NA	NA	80036660	80040187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80036758_80038122_80038187_80039811
transcript_43429.known	chr17	+	3549	21	FSM	ENSG00000171298.13	ENST00000390015.7	3549	21	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	34.5193786154965	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	10	True	NA	9	True	AATAAA	-15	NA	80101593	80119877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80101626_80101810_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_4343.known	chr1	-	4586	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	65.0984638835664	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	NA	False	NA	-9	True	ATTAAA	-17	NA	68497221	68474151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_43430.known	chr17	+	952	2	FSM	ENSG00000171298.13	ENST00000574376.1	952	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTTCCTGAGTTCTGT	13	True	NA	NA	False	AATAAA	-18	NA	80101596	80102733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80101626_80101810
transcript_43431.known	chr17	-	2524	12	FSM	ENSG00000141543.12	ENST00000649764.2	2524	12	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_7	86.4504826499726	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAGTAATTACCTGT	-2	True	NA	3	True	ATTAAA	-23	NA	80147128	80134368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792
transcript_43436.known	chr17	+	2888	18	FSM	ENSG00000181045.15	ENST00000361193.8	2888	18	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	19.3666141579946	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTAATGTCTGCGTGG	-6	True	NA	15	True	AATAAA	-17	NA	80220426	80253500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80220497_80220915_80221116_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_43437.known	chr17	+	1862	17	FSM	ENSG00000181045.15	ENST00000572725.5	1862	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	37.1886554442346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCACCCGTGGGCATC	1	True	NA	NA	False	NA	NA	NA	80220468	80252716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80220497_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_43439.known	chr17	+	1519	2	FSM	ENSG00000181045.15	ENST00000572652.5	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	5	True	NA	NA	False	NA	NA	NA	80220437	80222375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80220497_80220915
transcript_43440.known	chr17	-	2705	8	FSM	ENSG00000181523.13	ENST00000326317.11	2705	8	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	15.7155843619235	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGATACCAACCTG	0	True	NA	-20	True	AGTAAA	-29	NA	80220333	80209275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_80211012_80212070_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_43443.nic	chr17	+	586	4	ISM	ENSG00000173821.20	ENST00000508628.6	17730	69	-33	116402	-19	-13097	5prime_fragment	FALSE	canonical	2	2	junction_3	8.73053390247253	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCGAGTCAATAGTTT	-23	True	NA	NA	False	NA	NA	NA	80260832	80278910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_80260903_80263573_80263779_80273240_80273405_80278763
transcript_43445.nic	chr17	+	439	3	ISM	ENSG00000173821.20	ENST00000319921.4	5316	17	-37	48059	-19	-18603	5prime_fragment	FALSE	canonical	3	20	junction_1	0.5	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	-23	True	NA	51	True	AAGAAA	-45	NA	80260832	80273404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_80260903_80263573_80263779_80273240
transcript_43446.nnic	chr17	+	334	3	NNC	ENSG00000173821.20	novel	5316	17	NA	NA	-3	-18603	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	-7	True	NA	51	True	AAGAAA	-45	NA	80260848	80273404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_80260903_80263662_80263779_80273240
transcript_43451.nic	chr17	+	1189	10	NIC	ENSG00000173818.17	novel	2820	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.1179174895762	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	NA	False	NA	27	True	AATAGA	-24	NA	80415146	80430343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_43452.known	chr17	+	2820	10	FSM	ENSG00000173818.17	ENST00000518137.6	2820	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7704670451038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTTTTTTCTTCAG	-10	True	NA	6	True	AATAAA	-22	NA	80415166	80438086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_43455.nic	chr17	+	1158	10	NIC	ENSG00000173818.17	novel	908	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	31.8437543540021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	269	False	NA	27	True	AATAGA	-24	NA	80415445	80430343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415519_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_43459.nic	chr17	+	1398	9	ISM	ENSG00000173818.17	ENST00000518137.6	2820	10	-20	7743	-18	0	5prime_fragment	FALSE	canonical	0	0	junction_3	29.1965323283434	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	NA	False	NA	27	True	AATAGA	-24	NA	80415146	80430343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_43464.nic	chr17	+	1054	9	NIC	ENSG00000173818.17	novel	1226	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	16.1322658049017	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	NA	False	NA	27	True	AATAGA	-24	NA	80415146	80430343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_43465.known	chr17	+	2680	9	FSM	ENSG00000173818.17	ENST00000520367.5	2680	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	27.2304976083802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTTGATTTTTTTTC	-10	True	NA	1	True	AATAAA	-17	NA	80415166	80438081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_43468.nic	chr17	+	1023	9	NIC	ENSG00000173818.17	novel	908	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	24.7891105124811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	269	False	NA	27	True	AATAGA	-24	NA	80415445	80430343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_80415519_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_43470.known	chr17	+	1226	8	FSM	ENSG00000173818.17	ENST00000323854.9	1226	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	14.121918121437	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	7	True	NA	27	True	AATAGA	-24	NA	80415183	80430343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_43474.known	chr17	+	508	6	FSM	ENSG00000173818.17	ENST00000520484.1	508	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.366650958212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGTCCTCAGGTGAGGG	-12	True	NA	NA	False	NA	NA	NA	80415164	80429818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_43478.known	chr17	+	690	2	FSM	ENSG00000173818.17	ENST00000520537.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTCTGGGGAGTCT	-12	True	NA	NA	False	NA	NA	NA	80415164	80416253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80415251_80415649
transcript_43479.known	chr17	+	2286	9	FSM	ENSG00000141564.15	ENST00000570891.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	3.6721077053921	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTTTATGCTTATTTC	25	True	NA	9	True	ATTAAA	-20	NA	80544876	80823620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009_80754186_80791449_80791510_80822200_80822302_80823078
transcript_43480.known	chr17	+	1664	8	FSM	ENSG00000176108.9	ENST00000325167.9	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_7	13.7425304386471	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCGTGGACTTGGGCG	-19	True	NA	26	True	ATTAAA	-19	NA	80991840	81000133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_80991982_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365_80998421_80999097
transcript_43482.known	chr17	+	2129	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	14.5428641594145	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	12	False	NA	20	True	AATAAA	-15	NA	81035161	81116224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
transcript_43484.known	chr17	+	1939	14	FSM	ENSG00000175866.16	ENST00000321280.11	1939	14	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_13	12.8450022514687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTGCCAGGCAGGAC	3622	False	NA	NA	False	NA	NA	NA	81035121	81109238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_43485.known	chr17	+	3304	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	14.4733993913257	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	1	True	NA	NA	False	AATAAA	-26	NA	81035150	81117434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
transcript_43486.known	chr17	+	2512	13	FSM	ENSG00000175866.16	ENST00000575712.5	2512	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	6.91767060987054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	6	True	NA	NA	False	AAAAAG	-25	NA	81035155	81109387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474
transcript_43492.known	chr17	-	2455	13	FSM	ENSG00000167302.11	ENST00000637944.2	2455	13	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_12	13.6737786373124	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-10	True	NA	-5	True	AATAAA	-19	NA	81239055	81228276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_43493.known	chr17	-	2287	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	22.0555272208972	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-2	True	NA	-5	True	AATAAA	-19	NA	81239091	81228276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_43495.known	chr17	+	565	3	FSM	ENSG00000224877.4	ENST00000431388.3	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_1	74.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTCTTGGCCTCTC	-24	True	NA	67	True	GGGGCT	-20	NA	81239317	81241310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81239448_81239567_81239679_81240986
transcript_43496.known	chr17	-	633	2	FSM	ENSG00000185332.8	ENST00000571868.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAGAAAAAAGAA	3859	False	NA	NA	False	NA	NA	NA	81330429	81327594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81327942_81330143
transcript_43497.known	chr17	-	977	2	FSM	ENSG00000262877.5	ENST00000662306.1	977	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGGGCCCAGCCCCTT	8250	False	NA	NA	False	NA	NA	NA	81390319	81388776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81389324_81389889
transcript_43501.known	chr17	-	1449	6	FSM	ENSG00000184009.13	ENST00000571721.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	6445.86870483723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	1977	False	NA	NA	False	NA	NA	NA	81512778	81510689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512463
transcript_43505.known	chr17	-	1749	7	FSM	ENSG00000184009.13	ENST00000681092.1	1749	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7446.35925954572	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	0	True	NA	28	True	AATAAA	-12	NA	81512800	81509976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512247_81512361_81512733
transcript_43506.known	chr17	-	1919	6	FSM	ENSG00000184009.13	ENST00000573283.7	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_5	972.401768817807	15315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	1	True	NA	34	True	AATAAA	-18	NA	81512799	81509970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_43507.known	chr17	-	2005	7	FSM	ENSG00000184009.13	ENST00000572105.7	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	6943.3511941681	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	1904	False	NA	27	True	AATAAA	-11	NA	81512851	81509977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511762_81511804_81511902_81512143_81512231_81512361_81512733
transcript_43508.known	chr17	-	1958	5	FSM	ENSG00000184009.13	ENST00000576917.5	1958	5	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_4	1082.03220261691	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGCTGCCGTAACCA	1975	False	NA	13	True	NA	NA	NA	81512780	81509991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_43509.known	chr17	-	2141	6	FSM	ENSG00000184009.13	ENST00000679535.1	2141	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	6180.66490274307	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	1904	False	NA	27	True	AATAAA	-11	NA	81512851	81509977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_4351.nic	chr1	-	2405	11	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-33	3644	-33	-899	5prime_fragment	FALSE	canonical	3	168	junction_4	24.5823107131937	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	-7	True	NA	NA	False	ATTAAA	-37	NA	68497115	68477795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_43510.known	chr17	-	2241	5	FSM	ENSG00000184009.13	ENST00000574671.6	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_4	849.349898451751	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	1904	False	NA	28	True	AATAAA	-12	NA	81512851	81509976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81510834_81510926_81511109_81511187_81512143_81512231_81512361_81512733
transcript_43511.known	chr17	-	458	4	FSM	ENSG00000185527.12	ENST00000571004.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGGGACTGCAACCT	20	True	NA	NA	False	NA	NA	NA	81653694	81650962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81653670
transcript_43512.known	chr17	-	821	2	FSM	ENSG00000204237.5	ENST00000575992.1	821	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCAGCCTCCTTCCTTC	151	False	NA	-122	True	NA	NA	NA	81666537	81665155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665585_81666145
transcript_43513.known	chr17	-	637	2	FSM	ENSG00000204237.5	ENST00000374741.4	637	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-1	True	NA	-2	True	AATAAA	-24	NA	81666605	81665035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665585_81666517
transcript_43514.known	chr17	-	1600	1	FSM	ENSG00000204237.5	ENST00000575963.1	1600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-31	True	NA	-2	True	AATAAA	-24	NA	81666635	81665035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81665000_81666600
transcript_43515.known	chr17	+	2095	6	FSM	ENSG00000185298.13	ENST00000329214.13	2095	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	15.4609184720702	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	-4	True	NA	20	True	ATTAAA	-20	NA	81666736	81673899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81666901_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_43519.known	chr17	+	2893	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	0	0	0	0	multi-exon	FALSE	canonical	2	512	junction_17	77.2118151521707	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	-7	True	NA	11	True	AATAAA	-18	NA	81684010	81702121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_43520.known	chr17	+	3293	21	FSM	ENSG00000185359.14	ENST00000678115.1	3293	21	0	0	0	0	multi-exon	TRUE	canonical	2	512	junction_16	78.4750119464789	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	NA	False	NA	6	True	AATAAA	-13	NA	81683962	81702116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_43527.known	chr17	-	763	5	FSM	ENSG00000214087.9	ENST00000573715.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	214.739376920024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACCCTACATGATGG	3391	False	NA	NA	False	NA	NA	NA	81683668	81681607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81682490_81682676_81683012_81683127_81683592
transcript_43528.known	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	200.993003609578	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-4	True	NA	-32	True	AATAAA	-15	NA	81683797	81681186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
transcript_43530.known	chr17	-	1526	5	FSM	ENSG00000214087.9	ENST00000571082.5	1526	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	230.684849957686	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATATAAGAAATAAAA	5	True	NA	-65	True	NA	NA	NA	81683743	81681219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682676_81683012_81683127_81683535_81683595_81683692
transcript_43531.known	chr17	-	694	4	FSM	ENSG00000214087.9	ENST00000576135.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	217.306235529494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCTCACACCTGTAAT	3391	False	NA	NA	False	AAAAAG	-20	NA	81683668	81681491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683592
transcript_43533.nic	chr17	-	997	4	NIC	ENSG00000214087.9	novel	1087	5	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	229.759777932421	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	3238	False	NA	-32	True	AATAAA	-15	NA	81683821	81681186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_81681880_81682033_81682150_81683535_81683595_81683692
transcript_43534.known	chr17	-	1856	4	FSM	ENSG00000214087.9	ENST00000570910.1	1856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	229.037114896254	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATATAAGAAATAA	10	True	NA	-67	True	NA	NA	NA	81683738	81681221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81683127_81683535_81683595_81683692
transcript_43537.known	chr17	-	869	3	FSM	ENSG00000214087.9	ENST00000573392.5	869	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	257	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTGTCCCCA	3393	False	NA	-46	True	AATAAA	-1	NA	81683666	81681200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81682150_81683592
transcript_43539.known	chr17	-	2343	3	FSM	ENSG00000214087.9	ENST00000577142.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	3278	False	NA	-32	True	AATAAA	-15	NA	81683781	81681186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81681880_81682033_81683595_81683692
transcript_4354.nic	chr1	-	2130	10	NIC	ENSG00000024526.17	novel	5299	12	NA	NA	-24	-899	intron_retention	FALSE	canonical	3	34	junction_9	58.8414903588813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	2	True	NA	NA	False	ATTAAA	-37	NA	68497106	68477795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68496951
transcript_43541.known	chr17	+	1942	11	FSM	ENSG00000183048.12	ENST00000350690.10	1942	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	26.9646064313945	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	-16	True	NA	16	True	AATAAA	-16	NA	81712283	81721012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_43542.known	chr17	+	1009	5	FSM	ENSG00000262814.8	ENST00000333676.8	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_4	33.1841453106751	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGAGTGCCGTGCTC	-10	True	NA	29	True	AATACA	-13	NA	81703366	81707517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81703576_81704243_81704431_81704632_81704717_81706905_81707041_81707123
transcript_43544.known	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	227.57029683155	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-12	True	NA	-18	True	AATAAA	-16	NA	81833291	81822416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_43545.known	chr17	-	618	6	FSM	ENSG00000225663.8	ENST00000575061.2	618	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	478.621520619372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCGTGACTGACGGCTG	4579	False	NA	NA	False	NA	NA	NA	81833256	81823125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
transcript_43549.known	chr17	-	1282	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_4	162.915622332544	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-12	True	NA	38	True	NA	NA	NA	81833291	81822360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_43551.known	chr17	-	577	4	FSM	ENSG00000225663.8	ENST00000576431.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_3	172.666023164824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACGGCTGAGGCCTGCC	4593	False	NA	NA	False	NA	NA	NA	81833242	81823116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823514_81824286_81824406_81824498_81824555_81833237
transcript_43552.known	chr17	-	1123	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	366.400812711374	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	4533	False	NA	-30	True	AATAAA	-4	NA	81833302	81822428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
transcript_43554.known	chr17	-	2253	11	FSM	ENSG00000185624.16	ENST00000570907.6	2253	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	738.88551887285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCAGCCCTGGGGC	9439	False	NA	NA	False	NA	NA	NA	81860515	81843430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845459_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_43555.known	chr17	-	2377	11	FSM	ENSG00000185624.16	ENST00000680914.1	2377	11	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_6	730.481409756607	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-1	True	NA	-10	True	AATAAA	-13	NA	81860535	81843165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847013_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_43557.known	chr17	-	2394	11	FSM	ENSG00000185624.16	ENST00000680846.1	2394	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	726.81662061348	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	-1	True	NA	-46	True	NA	NA	NA	81860535	81843201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855580_81859180_81859388_81860326
transcript_43559.known	chr17	-	1989	10	FSM	ENSG00000185624.16	ENST00000680732.1	1989	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	758.349539916362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATCATGGCTCTTGCAT	1	True	NA	NA	False	NA	NA	NA	81860569	81843513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81859180_81859388_81860326
transcript_43560.known	chr17	-	2711	10	FSM	ENSG00000185624.16	ENST00000679366.1	2711	10	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_5	770.992450043897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCGAATTGAACACATTGG	9430	False	NA	-51	True	NA	NA	NA	81860524	81843206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_43562.known	chr17	-	886	7	FSM	ENSG00000141522.12	ENST00000584461.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	310.442515702272	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGGTGTGCTGCTG	20	True	NA	68	True	NA	NA	NA	81871329	81868259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81868585_81868988_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_43563.nnic	chr17	-	1824	7	NNC	ENSG00000141522.12	novel	1837	6	NA	NA	-24	0	intron_retention	FALSE	non_canonical	0	0	junction_1	377.554595021994	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	9584	False	NA	-18	True	AATAAA	-14	NA	81871402	81867720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_81868970_81869047_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_43564.known	chr17	-	1837	6	FSM	ENSG00000141522.12	ENST00000269321.12	1837	6	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_5	85.8882995523837	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	12	True	NA	-18	True	AATAAA	-14	NA	81871337	81867720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_43569.known	chr17	-	5089	13	FSM	ENSG00000185813.11	ENST00000538936.7	5089	13	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_7	25.675728919654	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTCCTGTCTCTCTA	14	True	NA	1	True	AATAAA	-21	NA	81911399	81900957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_43579.known	chr17	+	599	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1598.0032071307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGAAACAAGGGCTGGA	8	True	NA	-72	True	NA	NA	NA	81891749	81900159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_43582.known	chr17	+	578	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1569.85908780233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	24	True	ATTAAA	-15	NA	81891646	81900255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
transcript_43585.known	chr17	+	638	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	1280.11622736201	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	-19	True	NA	24	True	ATTAAA	-15	NA	81891722	81900255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
transcript_43586.known	chr17	+	964	4	FSM	ENSG00000141552.18	ENST00000612413.4	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	747.595255915035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGCCTCCAGACTGAAG	47	False	NA	NA	False	NA	NA	NA	81891712	81900533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893551_81893615_81894466_81894625_81899919
transcript_43589.known	chr17	+	722	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	1287.45045212104	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-10	True	NA	27	True	AATAAA	-21	NA	81891731	81900356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
transcript_43591.known	chr17	+	636	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	1475.81804057576	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	4	True	NA	23	True	ATTAAA	-14	NA	81891745	81900254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
transcript_43596.known	chr17	+	687	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1535.83426478539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	13	True	NA	23	True	ATTAAA	-14	NA	81891937	81900254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
transcript_43598.known	chr17	+	668	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	1546	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-19	True	NA	27	True	AATAAA	-21	NA	81891722	81900356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891834_81894466_81894587_81899919
transcript_43599.known	chr17	+	603	3	FSM	ENSG00000141552.18	ENST00000577425.5	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	236.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	-19	True	NA	22	True	ATTAAA	-13	NA	81891722	81900253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891834_81894466_81894625_81899919
transcript_4360.known	chr1	-	2843	15	FSM	ENSG00000066557.6	ENST00000370952.4	2843	15	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_7	24.4320173008238	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTTTATGTTTTCA	-14	True	NA	NA	False	AATAAA	-23	NA	70205579	70144804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
transcript_43601.known	chr17	+	575	3	FSM	ENSG00000141552.18	ENST00000579978.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	1606.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	-22	True	NA	21	True	ATTAAA	-12	NA	81891719	81900252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81894466_81894587_81899919
transcript_43602.known	chr17	+	563	3	FSM	ENSG00000141552.18	ENST00000579133.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	30	False	NA	23	True	ATTAAA	-14	NA	81891771	81900254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81894466_81894625_81899919
transcript_43604.known	chr17	+	686	3	FSM	ENSG00000141552.18	ENST00000572851.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	1818.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-7	True	NA	27	True	AATAAA	-21	NA	81891734	81900356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891864_81894466_81894587_81899919
transcript_43606.known	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	43	False	NA	23	True	ATTAAA	-14	NA	81892062	81900254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81892107_81894466_81894587_81899919
transcript_43607.known	chr17	+	523	3	FSM	ENSG00000141552.18	ENST00000582222.5	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGTTCAAACGGTTCTC	-19	True	NA	NA	False	NA	NA	NA	81891722	81894807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891842_81893551_81893615_81894466
transcript_43608.known	chr17	+	672	5	FSM	ENSG00000141552.18	ENST00000577747.5	672	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1603.35607009173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	18	True	NA	23	True	ATTAAA	-14	NA	81891759	81900254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891830_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_43609.known	chr17	+	881	4	FSM	ENSG00000141552.18	ENST00000357385.7	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	101.983658821728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	-3	True	NA	23	True	ATTAAA	-14	NA	81891738	81900254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81891864_81894466_81894587_81899241_81899543_81899919
transcript_43611.nic	chr17	-	1336	7	ISM	ENSG00000187531.14	ENST00000328666.11	1725	10	2503	0	253	0	3prime_fragment	FALSE	canonical	3	89	junction_4	9.04464236747676	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	7893	False	NA	-1	True	ATTAAA	-16	NA	81915673	81911938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610
transcript_43624.known	chr17	-	1346	8	FSM	ENSG00000183010.17	ENST00000402252.6	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	467.131585709366	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTCTTCACCCACTCC	8	True	NA	NA	False	NA	NA	NA	81937239	81932934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937179
transcript_43626.nnic	chr17	-	1868	8	NNC	ENSG00000183010.17	novel	1346	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_7	471.86732829282	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-1	True	NA	-19	True	ATTAAA	-18	NA	81937248	81932390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937210
transcript_43628.nnic	chr17	-	1859	8	NNC	ENSG00000183010.17	novel	1346	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	203	junction_7	411.270803084036	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-23	True	NA	-19	True	ATTAAA	-18	NA	81937270	81932390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_43629.known	chr17	-	1904	8	FSM	ENSG00000183010.17	ENST00000619204.4	1904	8	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_7	321.126524749917	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_43633.nnic	chr17	-	1702	7	NNC	ENSG00000183010.17	novel	1740	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	197	junction_1	570.853576283407	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937270	81932383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_43634.known	chr17	-	1740	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	513.589221936061	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_43639.known	chr17	-	1811	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	548.259797500743	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_43648.known	chr17	-	2269	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_2	129.815253341046	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	5	True	NA	-19	True	ATTAAA	-18	NA	81937300	81932390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_43649.known	chr17	-	1890	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	467.469741463203	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-10	True	NA	-12	True	ATTAAA	-25	NA	81937257	81932383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_43650.known	chr17	+	1764	16	FSM	ENSG00000169696.16	ENST00000306739.9	1764	16	0	0	0	0	multi-exon	TRUE	canonical	3	351	junction_7	38.8722122973325	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	10	True	NA	21	True	AATAAA	-19	NA	81977628	82017406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_43652.nnic	chr17	+	1723	16	NNC	ENSG00000169696.16	novel	5503	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	110.305756876058	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	281	False	NA	21	True	AATAAA	-19	NA	81977899	82017406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_81977979_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_43660.known	chr17	+	2698	17	FSM	ENSG00000169683.8	ENST00000306688.8	2698	17	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_12	14.1574571781094	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	7	True	NA	15	True	AATACA	-22	NA	82023304	82031151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82023864_82024277_82024340_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029092_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
transcript_43661.known	chr17	-	894	5	FSM	ENSG00000169689.15	ENST00000583767.1	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	720.293169480317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCTGGCAGCGCTGC	29	False	NA	NA	False	NA	NA	NA	82022852	82018865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022638
transcript_43663.known	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	614.020917803294	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	7	True	NA	-32	True	AATAAA	-6	NA	82022821	82018715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
transcript_43665.known	chr17	-	752	4	FSM	ENSG00000169689.15	ENST00000580090.5	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	712.562979672674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCACATTCCTGCCAC	8	True	NA	NA	False	NA	NA	NA	82022873	82018843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022638
transcript_43671.known	chr17	-	765	5	FSM	ENSG00000169689.15	ENST00000392359.8	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_2	396.520176031435	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	3	True	NA	-19	True	AATAAA	-19	NA	82022878	82018702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022825
transcript_43672.known	chr17	-	751	4	FSM	ENSG00000169689.15	ENST00000306704.10	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_2	301.164775865675	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	82022918	82018702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022825
transcript_43673.known	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	624.174299018756	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-11	True	NA	-19	True	AATAAA	-19	NA	82022892	82018702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
transcript_43674.known	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	540.299454006757	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	23	False	NA	-19	True	AATAAA	-19	NA	82022858	82018702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
transcript_43675.known	chr17	+	1038	6	FSM	ENSG00000169750.9	ENST00000306897.9	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	29.36256119619	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	9	True	NA	37	True	AATAAA	-16	NA	82031677	82034204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82031797_82032386_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_43678.nnic	chr17	+	1336	5	NNC	ENSG00000169750.9	novel	1038	6	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	55.7286954808741	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	86	False	NA	37	True	AATAAA	-16	NA	82032088	82034204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_82032459_82032710_82032829_82032946_82033010_82033320_82033600_82033698
transcript_43680.known	chr17	+	831	5	FSM	ENSG00000169750.9	ENST00000580965.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	13.9014387744578	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAAGAAGCCGGGGAA	58	False	NA	NA	False	NA	NA	NA	82032060	82033790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_43681.known	chr17	+	730	5	FSM	ENSG00000169750.9	ENST00000584341.1	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	58.1420673867038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTCTGCCCGCCCCC	-7	True	NA	NA	False	NA	NA	NA	82032183	82033772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82032499_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_43684.known	chr17	-	852	8	FSM	ENSG00000169738.8	ENST00000306869.7	852	8	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_7	128.55015697051	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCAGGTAGCTGGGGGCT	-2	True	NA	18	True	AATAAA	-41	NA	82037697	82035857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
transcript_43698.known	chr17	-	968	6	FSM	ENSG00000169738.8	ENST00000578885.5	968	6	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	116.085141168024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGCTGCCCAGACTA	51	False	NA	-20	True	AATAAA	-3	NA	82037681	82035895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82036064_82036190_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
transcript_43702.known	chr17	+	709	2	FSM	ENSG00000264569.2	ENST00000584705.2	713	2	4	0	4	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	5685	False	NA	8	True	NA	NA	NA	82037904	82039380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82038414_82039180
transcript_43707.nic	chr17	+	2053	14	NIC	ENSG00000169727.13	novel	1949	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	500.245076032413	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	-13	True	NA	28	True	ATTAAA	-17	NA	82051889	82057470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_82051965_82052255_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43711.known	chr17	+	1949	14	FSM	ENSG00000169727.13	ENST00000320548.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	501.18220003621	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	-28	True	NA	28	True	ATTAAA	-17	NA	82051874	82057470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82052374_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43713.nic	chr17	+	1850	13	NIC	ENSG00000169727.13	novel	875	8	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	3	62	junction_1	405.250359860009	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	NA	False	NA	28	True	ATTAAA	-17	NA	82051448	82057470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_82051525_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43714.known	chr17	+	1842	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_3	381.132404450504	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	6	True	NA	28	True	ATTAAA	-17	NA	82051908	82057470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43715.known	chr17	+	1839	13	FSM	ENSG00000169727.13	ENST00000623691.3	1839	13	0	0	0	0	multi-exon	TRUE	canonical	3	274	junction_5	364.990601096643	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	-6	True	NA	28	True	ATTAAA	-17	NA	82051896	82057470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055164_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43727.known	chr17	-	1865	8	FSM	ENSG00000169733.12	ENST00000310496.9	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	38.7693335574626	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	18	True	NA	-1	True	AGTAAA	-19	NA	82051811	82047901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293_82051343_82051499
transcript_43728.known	chr17	-	994	7	FSM	ENSG00000169733.12	ENST00000429557.7	994	7	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	38.8776571081929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGATGGGTGTTTTGGG	8555	False	NA	NA	False	NA	NA	NA	82051434	82048552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293
transcript_43731.known	chr17	-	1078	6	FSM	ENSG00000169733.12	ENST00000578676.5	1078	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_5	41.9351880882869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCAGCACTTGCGCACC	22	True	NA	NA	False	NA	NA	NA	82051335	82048444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82048808_82049030_82049117_82049676_82050007_82050401_82050556_82050661_82050765_82051293
transcript_43735.known	chr17	+	1855	13	FSM	ENSG00000169727.13	ENST00000584460.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	522.785249090548	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	26	True	NA	21	True	ATTAAA	-10	NA	82051928	82057463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82051965_82053233_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_43736.known	chr17	-	1040	4	FSM	ENSG00000169718.18	ENST00000542088.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_2	119.736748280922	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGCAAAAGTGAACAATAAA	5028	False	NA	-45	True	NA	NA	NA	82060775	82057913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82058255_82058340_82058819_82059947_82060094_82060700
transcript_43742.known	chr17	-	513	2	FSM	ENSG00000176155.20	ENST00000584717.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGCGTTGTTTATCTG	-4	True	NA	-5	True	ATTAAA	-30	NA	82106375	82101459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82101867_82106269
transcript_43743.nnic	chr17	-	603	2	NNC	ENSG00000176155.20	novel	2997	17	NA	NA	1976	0	intron_retention	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTTGGCCTTAGCGT	8574	False	NA	-15	True	ATTAAA	-20	NA	82104399	82101469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_-_82101867_82104193
transcript_43744.known	chr17	-	2047	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_2	80.6603915526828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	4	True	NA	17	True	AAGAAA	-2	NA	82273697	82244361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_43745.known	chr17	-	3712	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-31	0	-31	0	multi-exon	FALSE	canonical	3	189	junction_1	70.0204211284108	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	NA	False	NA	-15	True	AATAAA	-22	NA	82273731	82242666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_43750.known	chr17	-	598	2	FSM	ENSG00000141551.15	ENST00000579308.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	295	False	NA	NA	False	NA	NA	NA	82273406	82265299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82265797_82273305
transcript_43752.known	chr17	+	1195	1	FSM	ENSG00000260563.3	ENST00000566986.1	1195	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGACATGTTT	742	False	NA	10	True	AATAAA	-25	NA	82293715	82294910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82293700_82294900
transcript_43753.known	chr17	-	1284	4	FSM	ENSG00000173762.8	ENST00000312648.8	1284	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.942809041582063	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACTTCTGCATTTA	-1	True	NA	-7	True	AATAAA	-16	NA	82317608	82314872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82315432_82316194_82316410_82316666_82316982_82317413
transcript_43754.known	chr17	+	1935	2	FSM	ENSG00000182459.5	ENST00000333437.5	1935	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGTAAGTCATTCC	-2	True	NA	NA	False	CATAAA	-14	NA	82359246	82363775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82359286_82361879
transcript_43755.known	chr17	+	2167	13	FSM	ENSG00000169660.17	ENST00000327949.15	2167	13	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_10	17.8831081066898	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	-8	True	NA	20	True	AATAAA	-20	NA	82418346	82442645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441076_82441164_82441267_82441799_82441890_82442176
transcript_43758.known	chr17	-	841	8	FSM	ENSG00000178927.18	ENST00000578919.5	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	110.091798430367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGTGCACCGCCCACA	-39	True	NA	NA	False	NA	NA	NA	82450776	82443891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450699
transcript_43760.known	chr17	-	2073	7	FSM	ENSG00000178927.18	ENST00000306645.10	2073	7	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_6	46.4925322557887	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTCTCCCTGTGCTGCT	-15	True	NA	-5	True	NA	NA	NA	82450752	82442585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_43761.known	chr17	-	2050	6	FSM	ENSG00000178927.18	ENST00000434650.6	2050	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	108.811028852778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	7938	False	NA	-6	True	CATAAA	-17	NA	82450829	82442643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82449169_82449293_82450699
transcript_43762.known	chr17	-	1965	6	FSM	ENSG00000178927.18	ENST00000584024.5	1965	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	107.296971066289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-39	True	NA	-6	True	CATAAA	-17	NA	82450776	82442643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82447579_82447622_82449169_82449293_82450699
transcript_43764.known	chr17	+	1760	13	NNC	ENSG00000141562.19	novel	1722	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	287.252888971064	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTACTTTGGTTTCT	464	False	NA	23	True	ATTAAA	-21	NA	82458663	82488265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82481812_82481836_82483186_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43765.known	chr17	+	1454	12	FSM	ENSG00000141562.19	ENST00000582907.5	1454	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	269.532592058582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCAACTCCCCCAAG	21	False	NA	NA	False	NA	NA	NA	82458725	82488065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478570_82478668_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43766.known	chr17	+	1668	12	FSM	ENSG00000141562.19	ENST00000457415.7	1668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	272.825648923894	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCTGCCCTGAGTG	-2	True	NA	-27	True	NA	NA	NA	82458702	82488215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82480406_82480545_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43769.known	chr17	+	1722	12	FSM	ENSG00000141562.19	ENST00000374611.9	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	270.77171623722	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGATTACTTTGGTTT	-8	True	NA	21	True	ATTAAA	-19	NA	82458696	82488263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481219_82483173_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43774.known	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	188.424414553953	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	0	True	NA	20	True	AATAAA	-14	NA	82458740	82490537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43781.nic	chr17	+	1487	10	NIC	ENSG00000141562.19	novel	3814	11	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	254.12507856478	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAATGGATTACTTTG	455	False	NA	17	True	ATTAAA	-15	NA	82458654	82488259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43782.known	chr17	+	1487	10	FSM	ENSG00000141562.19	ENST00000345415.11	1487	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	191.611876226687	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	449	False	NA	20	True	ATTAAA	-18	NA	82458648	82488262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82458831_82459991_82460073_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_43787.known	chr17	-	357	3	FSM	ENSG00000265458.2	ENST00000579095.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTTTGGTGGAGA	-2	True	NA	NA	False	NA	NA	NA	82458521	82454272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82454414_82457437_82457549_82458416
transcript_43790.known	chr17	-	2322	10	FSM	ENSG00000141580.16	ENST00000572583.5	2322	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	176.934248790509	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	121	False	NA	-18	True	AATAAA	-20	NA	82648318	82614575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619095_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_43791.known	chr17	-	2496	10	FSM	ENSG00000141580.16	ENST00000392325.9	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_8	40.342362013639	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTAGAATTGTGTGT	-5	True	NA	-4	True	AATAAA	-34	NA	82648444	82614561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_43792.nic	chr17	-	2380	9	NIC	ENSG00000141580.16	novel	2496	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_7	178.620363830667	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	-5	True	NA	-18	True	AATAAA	-20	NA	82648444	82614575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82643948_82644024_82648273
transcript_43794.known	chr17	+	887	7	FSM	ENSG00000141560.15	ENST00000574356.5	887	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	176.347825491429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTCTGGGCCGGTGAT	20	True	NA	NA	False	NA	NA	NA	82716748	82726916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82720760_82720966_82722803_82722887_82726479_82726603_82726832
transcript_43797.known	chr17	+	1822	6	FSM	ENSG00000141560.15	ENST00000269373.11	1822	6	0	0	0	0	multi-exon	TRUE	canonical	3	355	junction_4	16.5336021483523	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAAGATTGTATATTTC	-23	True	NA	39	True	AATAAA	-45	NA	82716705	82728013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82722803_82722887_82726479_82726603_82726832
transcript_438.known	chr1	-	1692	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	17.1955212312167	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-14	True	NA	-3	True	AATAAA	-20	NA	3650103	3630769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_43801.known	chr17	+	627	4	FSM	ENSG00000141560.15	ENST00000573158.5	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	168.610662638979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATGAGGAATCTGG	58	False	NA	NA	False	NA	NA	NA	82716786	82727143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_+_82716897_82722803_82722887_82726479_82726603_82726832
transcript_43803.known	chr17	-	1383	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1642	-1	0	multi-exon	TRUE	canonical	3	39	junction_5	7.70777024970401	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-19	True	NA	-5	True	AATAAA	-21	NA	83051810	82943790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_4381.known	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	311.187867515571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	11	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_43811.known	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.9287753971957	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-6	True	NA	-15	True	AATAAA	-15	NA	268047	214519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_43814.known	chr18	-	2277	20	FSM	ENSG00000079134.13	ENST00000579232.5	2277	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.6538198818744	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	22	True	NA	-15	True	AATAAA	-15	NA	268019	214519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_43821.known	chr18	+	4972	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_3	53.2413373235496	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	2	True	NA	10	True	AATAAA	-22	NA	158556	214629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_43825.known	chr18	-	789	4	FSM	ENSG00000079134.13	ENST00000578224.5	789	4	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_3	11.1455023315337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGAGAATTGTGTACAG	22	True	NA	NA	False	AAGAAA	-6	NA	268019	263492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_264093_265302_265364_265456_265531_267965
transcript_43831.known	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	17.8093608344975	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	19	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_4384.known	chr1	+	2385	13	FSM	ENSG00000116754.14	ENST00000370951.5	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	293.336872611224	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	-31	True	NA	NA	False	NA	NA	NA	70205681	70251617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_43844.known	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_3	49.5210392998101	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	-31	True	NA	104	True	ATTAAA	-19	NA	657652	673578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
transcript_43850.nnic	chr18	-	487	2	FSM	ENSG00000176912.6	ENST00000688642.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-3	True	NA	-9	True	AATAAA	-20	NA	657595	649619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_649965_657453
transcript_43851.known	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	658340	649619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_649965_657841
transcript_43852.nnic	chr18	-	584	2	FSM	ENSG00000176912.6	ENST00000688530.1	586	2	0	2	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-18	True	NA	-9	True	AATAAA	-20	NA	658291	649619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_649965_658052
transcript_43853.nnic	chr18	-	362	2	FSM	ENSG00000176912.6	ENST00000688530.1	586	2	0	224	0	-222	multi-exon	FALSE	canonical	3	46	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTATTTTTTCTTGG	-18	True	NA	NA	False	AATAAA	-12	NA	658291	649841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_649965_658052
transcript_43855.known	chr18	-	4605	12	FSM	ENSG00000176105.14	ENST00000314574.5	4605	12	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	41.3934957161546	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	22	True	NA	-1	True	ATTAAA	-22	NA	812242	721587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
transcript_43858.known	chr18	-	3684	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	15.7619002661481	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-28	True	NA	-4	True	ATTAAA	-22	NA	2571505	2537529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_43862.nic	chr18	-	2387	9	NIC	ENSG00000101574.15	novel	3684	9	NA	NA	1	-604	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	23.8746727726266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGACTGAAATGATTC	-27	True	NA	-11	True	AATAAA	-21	NA	2571504	2538134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2567511_2567655_2571148
transcript_43872.known	chr18	+	2126	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	34.6517834137004	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	7	True	NA	NA	False	AATAAA	-20	NA	2571556	2616635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
transcript_43876.nic	chr18	+	1749	14	ISM	ENSG00000080986.13	ENST00000261597.9	2126	17	-61	10133	-61	-8812	5prime_fragment	FALSE	canonical	3	304	junction_3	32.6369667345655	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTAAGAACTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	2571495	2606502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414
transcript_43880.nic	chr18	+	1049	9	ISM	ENSG00000080986.13	ENST00000261597.9	2126	17	-61	27343	-61	6413	5prime_fragment	FALSE	canonical	3	304	junction_3	27.9013328534678	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAAAAAGAACCGGT	NA	False	NA	NA	False	AATGAA	-22	NA	2571495	2589292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203
transcript_43882.known	chr18	-	686	1	FSM	ENSG00000272688.1	ENST00000609924.1	686	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCGGAGTCTTTAAGG	9038	False	NA	NA	False	AATAAA	-25	NA	3247086	3246400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_3246400_3247100
transcript_43885.known	chr18	+	1004	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1842.94804593076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	-9	True	NA	-11	True	AATATA	-40	NA	3247812	3256211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
transcript_43888.known	chr18	+	947	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1713.49979736082	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	5	True	NA	5	True	ATTAAA	-7	NA	3247480	3256227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
transcript_43890.known	chr18	+	958	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	3449	junction_1	180.691880159446	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTGTTTAAACTTCTT	-21	True	NA	14	True	ATTAAA	-16	NA	3247800	3256236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
transcript_43893.known	chr18	+	1163	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_2	84.2588603979163	1129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGCTTCTAGTCAGATG	-5	True	NA	NA	False	AGTAAA	-21	NA	3262132	3278461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
transcript_43895.known	chr18	+	614	2	FSM	ENSG00000101608.13	ENST00000585090.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACTCGACTTTATG	39	True	NA	NA	False	AATAAA	-21	NA	3247860	3249925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3247910_3249360
transcript_43896.known	chr18	+	3030	3	FSM	ENSG00000177426.22	ENST00000618001.4	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	837	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	19	False	NA	NA	False	AATATA	-23	NA	3447608	3459978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3447798_3456353_3456581_3457364
transcript_43902.known	chr18	+	801	3	FSM	ENSG00000177426.22	ENST00000549780.5	801	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGGACCTCAACCAGGAC	29	False	NA	NA	False	AATACA	-35	NA	3448498	3457839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3448598_3456353_3456581_3457364
transcript_43909.known	chr18	+	563	3	FSM	ENSG00000177426.22	ENST00000549253.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGGGCCAAGATTTCTG	73	False	NA	NA	False	NA	NA	NA	3449412	3457456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3449657_3456353_3456581_3457364
transcript_43911.known	chr18	+	990	3	FSM	ENSG00000177426.22	ENST00000551541.5	990	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	830	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAGCAAAACAGTTCT	-5	True	NA	NA	False	NA	NA	NA	3451592	3457944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3451776_3456353_3456581_3457364
transcript_43913.known	chr18	+	1088	3	FSM	ENSG00000177426.22	ENST00000345133.9	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	862.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAACAAAGGGTTTT	-1	True	NA	-88	True	TATAAA	-11	NA	3451669	3458123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3451772_3456353_3456581_3457364
transcript_43917.known	chr18	+	1980	3	FSM	ENSG00000177426.22	ENST00000330513.10	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	827	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTAATTCAGAGTATT	6	True	NA	73	True	AATAAA	-17	NA	3451676	3458411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3452383_3456353_3456581_3457364
transcript_43922.known	chr18	+	450	3	FSM	ENSG00000266835.6	ENST00000581442.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAACTTGGCACTTAG	4393	False	NA	-48	True	CATAAA	-35	NA	3466249	3478927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3466358_3467126_3467297_3478755
transcript_43923.known	chr18	-	285	2	FSM	ENSG00000170579.17	ENST00000578250.6	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATTTCAAAGTAAAAGG	NA	False	NA	NA	False	ATTAAA	-34	NA	4151287	4005024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_4005202_4151179
transcript_43924.known	chr18	+	501	4	FSM	ENSG00000177337.9	ENST00000573355.3	543	4	42	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	13.8884444373331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGGGTAGCTGGTTG	20	True	NA	21	True	AATAAA	-27	NA	3594111	3597385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3594241_3594419_3594485_3596578_3596676_3597175
transcript_43925.known	chr18	+	1977	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	2	0	2	0	multi-exon	FALSE	canonical	3	29	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCTGTCTC	11	True	NA	NA	False	NA	NA	NA	3594102	3598352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3594241_3594419_3594485_3596578
transcript_43927.known	chr18	+	391	3	FSM	ENSG00000177337.9	ENST00000576606.6	398	3	0	7	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	20	True	NA	8	True	AATAAA	-14	NA	3594111	3597372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3594241_3594419_3594485_3597175
transcript_43928.known	chr18	+	408	3	FSM	ENSG00000177337.9	ENST00000574411.5	408	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	35	True	NA	8	True	AATAAA	-14	NA	3594126	3597372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3594241_3596578_3596676_3597175
transcript_43929.nnic	chr18	+	779	3	FSM	ENSG00000262001.2	ENST00000691824.1	673	3	-107	1	-63	0	multi-exon	FALSE	canonical	3	16	junction_2	199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	10	False	NA	8	True	AATAAA	-28	NA	3603864	3610094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553_3606620_3609732
transcript_43931.nnic	chr18	+	736	3	FSM	ENSG00000262001.2	ENST00000687483.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	174	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	74	False	NA	8	True	AATAAA	-28	NA	3603928	3610094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553_3606641_3609732
transcript_43933.nnic	chr18	+	813	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-19	9	-19	0	multi-exon	FALSE	canonical	3	179	junction_2	117.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	54	False	NA	8	True	AATAAA	-28	NA	3603908	3610094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553_3606698_3609732
transcript_43934.nnic	chr18	+	736	3	NNC	ENSG00000262001.2	novel	1056	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGATTTTATTTTT	72	False	NA	16	True	AATAAA	-17	NA	3603926	3608465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_3604216_3606553_3606816_3608280
transcript_43935.nnic	chr18	+	1597	3	NNC	ENSG00000262001.2	novel	1056	3	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	207	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGATTTTATTTTT	414	False	NA	16	True	AATAAA	-17	NA	3603106	3608465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_3604216_3606553_3606865_3608288
transcript_43937.known	chr18	+	2261	2	FSM	ENSG00000262001.2	ENST00000572856.1	2261	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTCACACTGGGGAT	-2	True	NA	NA	False	NA	NA	NA	3603737	3608336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_3604216_3606553
transcript_43941.nnic	chr18	-	928	3	NNC	ENSG00000266268.5	novel	561	5	NA	NA	-98	-194610	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	3	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTTACCTAACAT	NA	False	NA	NA	False	AATAAA	-21	NA	5004635	5002544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_5003290_5003974_5004004_5004481
transcript_43945.known	chr18	+	4669	4	FSM	ENSG00000263753.9	ENST00000656810.1	4669	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	20.8326666559997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTACTCAAAACTCATG	-20	True	NA	5	True	ATTAAA	-24	NA	5238080	5246494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_5239050_5240647_5241256_5241698_5241890_5243593
transcript_43946.known	chr18	-	825	4	FSM	ENSG00000198081.11	ENST00000582388.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	57.5750717662504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGAGACCCCAGAATC	5	True	NA	NA	False	NA	NA	NA	5295702	5291544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
transcript_43948.known	chr18	-	3528	4	FSM	ENSG00000198081.11	ENST00000357006.8	3528	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	49.7482551341139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTTTCATTTTTTCA	-16	True	NA	-2	True	TATAAA	-20	NA	5296040	5289018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295812
transcript_43950.known	chr18	+	4017	3	FSM	ENSG00000263753.9	ENST00000582008.6	4017	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	-39	True	NA	19	True	ATTAAA	-38	NA	5238061	5246508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_5239050_5241698_5241813_5243593
transcript_43951.known	chr18	+	4461	3	FSM	ENSG00000263753.9	ENST00000657250.1	4461	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTTTCAGCTACCTC	-39	True	NA	NA	False	NA	NA	NA	5238061	5246875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_5239050_5241698_5241890_5243593
transcript_43955.known	chr18	-	1814	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	40	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	707	False	NA	NA	False	NA	NA	NA	5296195	5290857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5292205_5293243_5293328_5295812
transcript_43957.known	chr18	+	3411	2	FSM	ENSG00000263753.9	ENST00000653507.2	3442	2	31	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTAGCCTGGGCAACAA	-1	True	NA	NA	False	NA	NA	NA	5238099	5243264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_5238894_5240647
transcript_43958.known	chr18	+	2034	1	FSM	ENSG00000263753.9	ENST00000581471.2	2034	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCCAGTTAGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	5237825	5239859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_5237800_5239900
transcript_43960.known	chr18	-	3972	21	FSM	ENSG00000082397.18	ENST00000544123.5	3972	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	49.6501762333227	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTATGTTTAATAAT	3698	False	NA	-2	True	AATAAA	-25	NA	5540556	5392380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5398020_5398144_5406776_5406969_5407700_5407737_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5540339
transcript_43963.known	chr18	-	867	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1012	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	20	False	NA	NA	False	NA	NA	NA	6463010	6462143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_6462100_6463000
transcript_43968.known	chr18	-	491	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCACATTAACAGATACC	NA	False	NA	79	True	NA	NA	NA	6729862	6728820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_6729169_6729719
transcript_43969.known	chr18	-	9642	63	FSM	ENSG00000101680.16	ENST00000389658.4	9642	63	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_41	64.8763431949394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAAGCCTTTTATTTCT	2	True	NA	-2	True	AATACA	-18	NA	7117797	6941741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
transcript_43970.nic	chr18	-	1911	11	ISM	ENSG00000101680.16	ENST00000389658.4	9642	63	-33	96830	-33	0	5prime_fragment	FALSE	canonical	3	195	junction_5	22.922478051031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTCTTGTTTCAATTTCT	-1	True	NA	2	True	AAAACA	-22	NA	7117830	7038571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
transcript_43971.known	chr18	-	818	2	FSM	ENSG00000265962.2	ENST00000579368.2	896	2	78	0	78	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTAAAATTATTGT	36	False	NA	NA	False	AATAAA	-15	NA	8707621	8695855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_8696122_8707069
transcript_43972.nic	chr18	+	1738	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-32	31248	-32	464	5prime_fragment	FALSE	canonical	3	25	junction_3	24.225180597882	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGGAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	9136748	9254737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43973.nic	chr18	+	2254	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-32	30732	-32	-858	5prime_fragment	FALSE	canonical	3	25	junction_3	24.225180597882	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGCATAAAAAAGAAAT	NA	False	NA	NA	False	ATTAAA	-35	NA	9136748	9255253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43982.nic	chr18	+	1669	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-32	464	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGGAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	9136748	9254737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43983.nic	chr18	+	2185	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-32	-858	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGCATAAAAAAGAAAT	NA	False	NA	NA	False	ATTAAA	-35	NA	9136748	9255253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43984.nic	chr18	+	2374	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-32	-669	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGGAAAAAAACATCAAAGA	NA	False	NA	7	True	TTTAAA	-41	NA	9136748	9255442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43985.nic	chr18	+	3051	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-32	8	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAAAGACAGGGAGC	NA	False	NA	17	True	AATAAA	-45	NA	9136748	9256119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_43998.known	chr18	+	857	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	0	0	0	0	multi-exon	FALSE	canonical	3	3513	junction_2	236.182565151691	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	-14	True	NA	24	True	AATAAA	-25	NA	9102698	9134341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
transcript_44.known	ERCC-00126	+	1111	1	FSM	ERCC-00126A	DQ459427	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00126_+_0_1100
transcript_440.known	chr1	-	1998	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	15.1208465371486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	9111	False	NA	0	True	AATAAA	-23	NA	3650058	3630766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_44008.known	chr18	+	868	2	FSM	ENSG00000178127.13	ENST00000497577.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAACTGTTTTCTG	-18	True	NA	NA	False	NA	NA	NA	9102694	9103856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9102798_9103091
transcript_44009.nnic	chr18	-	1119	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-47	-7988	at_least_one_novel_splicesite	TRUE	canonical	2	13	junction_1	0.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCTGCATTGCTGTA	330	False	NA	NA	False	AATAAA	-16	NA	9334492	9318509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_44010.nnic	chr18	-	1007	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-47	-8100	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAACAATTTCTTTGTA	330	False	NA	2	True	AATAAA	-22	NA	9334492	9318621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_44013.known	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	25.810608284192	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	4	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
transcript_44015.known	chr18	+	4379	10	FSM	ENSG00000017797.13	ENST00000383432.8	4379	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_9	21.5240319321749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	-22	True	NA	40	True	ATTAAA	-28	NA	9475512	9538114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9475692_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
transcript_4402.nic	chr1	+	1278	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-11	1225	-11	-333	5prime_fragment	FALSE	canonical	3	294	junction_1	259.589217771985	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	1	True	NA	-6	True	CATAAA	-22	NA	70205670	70250392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364
transcript_44020.known	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	65	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9475692_9512990_9513290_9516844
transcript_44022.known	chr18	+	836	3	FSM	ENSG00000017797.13	ENST00000458039.3	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCAGCCGTTTTCCG	203	False	NA	NA	False	NA	NA	NA	9476126	9517221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9476287_9512990_9513290_9516844
transcript_44025.known	chr18	-	3885	20	FSM	ENSG00000154845.16	ENST00000400555.7	3885	20	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_18	29.3505888137174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTCTCTGGAATCT	-18	True	NA	-1	True	ATTAAA	-22	NA	9614569	9546790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
transcript_44029.known	chr18	-	3923	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_18	33.4494284843251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTTTCTCTGGAA	-8	True	NA	-4	True	ATTAAA	-19	NA	9614559	9546793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
transcript_44032.known	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	21.505167337694	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	20	True	NA	21	True	AATAAA	-15	NA	9708300	9862551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_44034.known	chr18	+	1227	7	FSM	ENSG00000101558.14	ENST00000340541.4	1227	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	655.293996784819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGGTTAGAAAACACAA	26	True	NA	NA	False	NA	NA	NA	9914061	9954358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9944923_9945059_9950394_9950569_9954052
transcript_44035.known	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_4	66.9525204902698	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	-20	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
transcript_44040.known	chr18	+	3559	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	23.9669193502314	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGTTCTTTGTATTA	-1	True	NA	NA	False	AATAAA	-18	NA	10526026	10552764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_44046.known	chr18	+	1516	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	84.2086815050344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTATGAGTTTGAAAAA	4	True	NA	10	True	AATAAA	-20	NA	10525904	10550801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_44049.known	chr18	+	887	8	FSM	ENSG00000134265.13	ENST00000582978.5	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	24.715524328995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGACAAATAGTGTCA	25	True	NA	NA	False	CATAAA	-24	NA	10526101	10540779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328
transcript_4405.nic	chr1	+	1603	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	-29	2385	-19	-58	multi-exon	FALSE	canonical	3	805	junction_11	123.001713352308	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAAACCAATAGA	-18	True	NA	23	True	NA	NA	NA	70221350	70250667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_44050.known	chr18	+	6045	12	FSM	ENSG00000141404.17	ENST00000423027.8	6045	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	22.6879660096028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	5	True	NA	23	True	AATAAA	-23	NA	11752084	11885685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_44051.known	chr18	+	1038	8	FSM	ENSG00000141404.17	ENST00000602628.1	1038	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.8173672289039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTGACTGCCAGCCC	4811	False	NA	NA	False	NA	NA	NA	11857439	11881172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11857786_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_44052.known	chr18	+	3032	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	-4	True	NA	9	True	ATTAAA	-16	NA	11851412	11854444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11851400_11854400
transcript_44059.nic	chr18	-	2243	13	NIC	ENSG00000154889.17	novel	1910	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	23.7993639037312	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGTGGTTCTCAAA	-5	True	NA	-8	True	AATAAA	-21	NA	11908350	11884052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_11884628_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11897525_11897621_11905737_11905954_11906202_11906310_11908200
transcript_4406.nic	chr1	+	2452	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	80	1427	-9	8	multi-exon	FALSE	canonical	3	805	junction_11	123.001713352308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATCTCTTGCCCTTATT	-26	True	NA	NA	False	AAAAAG	-8	NA	70221459	70251625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_44062.known	chr18	-	2427	12	FSM	ENSG00000154889.17	ENST00000496196.5	2427	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.0357771165633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGATGTGATGTGCAGA	-6	True	NA	NA	False	AATATA	-16	NA	11908317	11883689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11884628_11884878_11885044_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_44068.known	chr18	-	3330	11	FSM	ENSG00000154889.17	ENST00000588072.6	3330	11	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	14.9361976419703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCTCCCAGGTTCAAG	-6	True	NA	NA	False	NA	NA	NA	11908317	11882621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_4407.nic	chr1	+	2880	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	28	1051	12	0	multi-exon	FALSE	canonical	3	805	junction_11	123.001713352308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	-5	True	NA	13	True	AATAAA	-14	NA	70221407	70252001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_44076.nic	chr18	-	1852	10	NIC	ENSG00000154889.17	novel	3330	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	17.5316292651698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGTGGTTCTCAAA	293	False	NA	-8	True	AATAAA	-21	NA	11908377	11884052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_11884628_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11908200
transcript_44077.known	chr18	-	1831	10	FSM	ENSG00000154889.17	ENST00000344987.11	1831	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	22.2660678562196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTTTCCCTCTTCCTGT	340	False	NA	-23	True	AATAAA	-6	NA	11908330	11884067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_44080.nnic	chr18	-	1610	8	NIC	ENSG00000154889.17	novel	2324	9	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	25.8480647047239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTCTCAAATTCCTATG	-5	True	NA	0	True	AATAAA	-29	NA	11908350	11884044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_11884628_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_44081.known	chr18	-	1152	7	FSM	ENSG00000154889.17	ENST00000588191.5	1152	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	31.7056777249754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGTTCACAAAAGCC	-3	True	NA	NA	False	NA	NA	NA	11908348	11889386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11889491_11893467_11893577_11896983_11897357_11897525_11897621_11905737_11905954_11906202_11906310_11908200
transcript_44082.known	chr18	-	379	3	FSM	ENSG00000154889.17	ENST00000593001.5	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	25	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTTGTCTTTGCTGTG	10	True	NA	NA	False	ATTAAA	-30	NA	11908301	11897185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_11897357_11906202_11906310_11908200
transcript_44087.known	chr18	+	923	8	FSM	ENSG00000141401.12	ENST00000589238.5	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	341.215354823529	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCGTGGCCCAC	11	False	NA	NA	False	NA	NA	NA	11981036	12030516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11981131_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_44089.nic	chr18	+	1397	8	NIC	ENSG00000141401.12	novel	923	8	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	338.443254822273	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	NA	False	NA	31	True	AATAAA	-14	NA	11980998	12030877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_11981206_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_44090.nnic	chr18	+	1272	8	NNC	ENSG00000141401.12	novel	1449	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	339.482739785464	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	419	False	NA	31	True	AATAAA	-14	NA	11981444	12030877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_11981527_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_44091.known	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_4	47.4956496396657	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	-5	True	NA	31	True	AATAAA	-14	NA	11981506	12030877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_44098.known	chr18	-	3160	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	0	0	0	multi-exon	TRUE	canonical	3	591	junction_15	55.9637159238019	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCCCTATTTATGC	5	True	NA	-1	True	AATAAA	-29	NA	12377227	12328943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
transcript_44104.known	chr18	+	788	4	FSM	ENSG00000176014.13	ENST00000586653.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	327.591547849181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACCGCATCATGAACACC	-3	True	NA	NA	False	NA	NA	NA	12308240	12325267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12324808
transcript_44105.known	chr18	+	1879	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	53.160135440008	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	-3	True	NA	33	True	CATAAA	-26	NA	12308240	12326616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
transcript_44106.known	chr18	+	1017	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	307.086307086461	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	-10	True	NA	15	True	ATTAAA	-18	NA	12308233	12329826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
transcript_44108.known	chr18	+	408	3	FSM	ENSG00000176014.13	ENST00000587204.1	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTCATAGAAAAAGTGTGA	0	True	NA	NA	False	TTTAAA	-35	NA	12308243	12311135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12310942
transcript_4411.nic	chr1	+	2934	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	15669	-384	-19	0	3prime_fragment	FALSE	canonical	3	525	junction_11	196.005144138937	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	-18	True	NA	13	True	AATAAA	-14	NA	70221350	70252001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_44110.known	chr18	+	1075	3	FSM	ENSG00000176014.13	ENST00000590103.5	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	360	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTCAAGCGCATCTC	160	False	NA	NA	False	NA	NA	NA	12308231	12325914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12308686_12308796_12325066
transcript_44112.known	chr18	+	485	3	FSM	ENSG00000176014.13	ENST00000591463.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	324.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCAGCTGGTGGAGAA	19	False	NA	NA	False	NA	NA	NA	12308262	12325353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12308350_12310942_12311054_12325066
transcript_44115.known	chr18	-	2895	12	FSM	ENSG00000101624.11	ENST00000262127.7	2895	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	13.1689592452595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGGTCAGAGGATT	0	True	NA	NA	False	GATAAA	-26	NA	12702723	12672624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12691358_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
transcript_44126.known	chr18	+	1070	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	19.5930826795808	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	6	True	NA	26	True	AATAAA	-19	NA	12703041	12725740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
transcript_44129.known	chr18	+	1036	6	FSM	ENSG00000128789.21	ENST00000590217.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	21.3410402745508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTAGATTAATTATGC	-13	True	NA	NA	False	AAAAAG	-33	NA	12703022	12724868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498
transcript_44133.known	chr18	+	711	5	FSM	ENSG00000128789.21	ENST00000586587.1	711	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	221.696160318577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTAAGGGTCTCTTTGCC	-10	True	NA	-1	True	AGTAAA	-14	NA	12703025	12725658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12724498_12724620_12725438
transcript_44134.known	chr18	-	897	4	FSM	ENSG00000101624.11	ENST00000586887.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	42.4970587217516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGGATATTATTTTTT	-2	True	NA	NA	False	TTTAAA	-42	NA	12702777	12698792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12699166_12699829_12699906_12700957_12701114_12702485
transcript_44136.known	chr18	+	377	3	FSM	ENSG00000128789.21	ENST00000585853.2	377	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCCCAGGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	12658042	12663471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12658206_12658573_12658774_12663457
transcript_44138.known	chr18	+	471	2	FSM	ENSG00000128789.21	ENST00000400514.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGATTCATTTGTAACATT	-1	True	NA	NA	False	TATAAA	-39	NA	12658192	12658893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12658344_12658573
transcript_44141.nic	chr18	-	1702	11	NIC	ENSG00000175354.20	novel	1648	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	181.818150909088	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	273	False	12884263	-4	True	ATTAAA	-16	NA	12884244	12785480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_12785845_12793481_12793575_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_44142.known	chr18	-	1648	11	FSM	ENSG00000175354.20	ENST00000591115.5	1648	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_6	184.020216280712	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	-13	True	NA	-4	True	ATTAAA	-16	NA	12884214	12785480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12819213_12819283_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_44145.known	chr18	-	1706	10	FSM	ENSG00000175354.20	ENST00000327283.7	1706	10	0	0	0	0	multi-exon	TRUE	canonical	1	143	junction_7	103.454528688564	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	179	False	NA	-1	True	ATTAAA	-19	NA	12884338	12785477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_44146.known	chr18	-	1326	10	FSM	ENSG00000175354.20	ENST00000645816.1	1326	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	195.298315657779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTATATTGGCAACCTA	282	False	12884263	NA	False	AAAAAG	-7	NA	12884235	12794383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12821335_12821426_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_44150.known	chr18	-	3470	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	0	0	0	0	multi-exon	FALSE	canonical	1	143	junction_6	108.952326156902	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTGTCCTGATTCA	280	False	12884263	-3	True	ATTAAA	-17	NA	12884237	12792151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_44164.known	chr18	+	3494	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_6	63.944189532748	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTTTTTGGTCTTTT	7	False	NA	27	True	AATAAA	-32	NA	12947994	12987536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_44168.nic	chr18	+	1517	8	NIC	ENSG00000085415.16	novel	3494	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	257.120157728258	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTGAGTGCTGATTT	-23	True	NA	NA	False	AATAAA	-15	NA	12948006	12985718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_12948233_12951854_12951906_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_44172.known	chr18	+	6236	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	33.7607038428843	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	-10	True	NA	29	True	AATAAA	-20	NA	13726672	13764556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_44174.known	chr18	+	4108	12	FSM	ENSG00000101654.18	ENST00000592764.5	4108	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	43.2400564215502	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	21	True	NA	29	True	AATAAA	-20	NA	13726703	13764556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
transcript_44176.known	chr18	+	1849	11	FSM	ENSG00000101654.18	ENST00000543302.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	26.0785352349399	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCCACAGTGTTCAGA	-23	True	NA	9	True	CATAAA	-31	NA	13726659	13760285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_44179.nic	chr18	+	1449	9	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-21	18276	-8	3206	5prime_fragment	FALSE	canonical	3	58	junction_1	34.4072575919674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGATTAAGAACAATGA	-31	True	NA	NA	False	AAAACA	-19	NA	13726651	13746280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219
transcript_4418.nic	chr1	+	1432	11	ISM	ENSG00000116754.14	ENST00000370949.2	3959	12	-29	2660	-19	-333	5prime_fragment	FALSE	canonical	3	1054	junction_2	68.1920816517578	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	-18	True	NA	-6	True	CATAAA	-22	NA	70221350	70250392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364
transcript_44182.known	chr18	-	1091	4	FSM	ENSG00000177150.13	ENST00000592976.5	1091	4	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	6.94422221866655	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGAATAAGGTGCC	-31	True	NA	70	True	AAAAAG	-13	NA	13726586	13666493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
transcript_44185.nic	chr18	+	553	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-21	32735	-8	0	5prime_fragment	FALSE	canonical	3	58	junction_1	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	-31	True	NA	16	True	AAAAAG	-25	NA	13726651	13731821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_44186.nic	chr18	+	623	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-21	32665	-8	70	5prime_fragment	FALSE	canonical	3	58	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGAAAAATAGCACTTG	-31	True	NA	86	True	GATAAA	-27	NA	13726651	13731891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_44187.nic	chr18	+	450	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-19	28449	-19	15	5prime_fragment	FALSE	canonical	3	82	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTGAGGATGTTCCA	58	False	NA	31	True	AAAAAG	-40	NA	13726640	13731836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_13726730_13731475
transcript_44192.known	chr18	-	2117	3	FSM	ENSG00000175322.12	ENST00000589498.5	2117	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	4	True	NA	-11	True	AATAAA	-26	NA	14132428	14099937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14101774_14124349_14124477_14132274
transcript_44194.known	chr18	-	6760	3	FSM	ENSG00000175322.12	ENST00000590202.3	6760	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-3	True	NA	-11	True	AATAAA	-26	NA	14132435	14099937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14106410_14124349_14124477_14132274
transcript_44198.known	chr18	-	599	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATGAATGTGAAAAAGT	NA	False	NA	53	True	AGTAAA	-37	NA	14132457	14105993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_14106410_14132274
transcript_442.known	chr1	+	506	4	FSM	ENSG00000235169.11	ENST00000642557.4	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	10.6770782520313	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	-2	True	NA	32	True	AATAAA	-35	NA	3772748	3775956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_3772789_3773062_3773182_3775298_3775484_3775794
transcript_44201.known	chr18	-	9446	33	FSM	ENSG00000067900.8	ENST00000399799.3	9446	33	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_32	31.0008662933393	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTGGATAACTGTGAG	-13	True	NA	NA	False	ATTAAA	-18	NA	21111813	20946905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_20951388_20953577_20953786_20954782_20955045_20955166_20955246_20959839_20959929_20960135_20960207_20966916_20967077_20967751_20967941_20968771_20968861_20969114_20969209_20970347_20970514_20979909_20980005_20982762_20982833_20984350_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_44204.known	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	203	junction_6	30.4972563459092	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-26	True	NA	-45	True	AATAAA	-42	NA	21600704	21529283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_44207.nic	chr18	-	3556	8	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	16	31023	16	-31016	5prime_fragment	FALSE	canonical	3	203	junction_2	31.0108605070507	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCACAGAGTAAATCTGT	147	False	NA	NA	False	ACTAAA	-14	NA	21600868	21560325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_44209.nic	chr18	-	1462	4	ISM	ENSG00000141446.11	ENST00000269214.10	4488	12	-37	45041	-37	18718	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTGAAGAGAAAAGTACT	-6	True	NA	NA	False	AATAAA	-13	NA	21600741	21574324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_44211.nic	chr18	-	1257	4	ISM	ENSG00000141446.11	ENST00000269214.10	4488	12	-52	45261	-52	18498	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTATCTCAGAAAAAAT	259	False	NA	NA	False	AATAAA	-45	NA	21600756	21574544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_44221.known	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	4976	junction_3	306.235566553303	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	-12	True	NA	4	True	AATAAA	-14	NA	21612313	21633520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
transcript_44222.known	chr18	+	320	4	FSM	ENSG00000167088.11	ENST00000579618.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	2303.1648274108	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGAAGAGGGGGTCCT	-12	True	NA	-43	True	NA	NA	NA	21612313	21629109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_21612444_21622724_21622802_21623874_21623940_21629061
transcript_44225.known	chr18	+	723	3	FSM	ENSG00000167088.11	ENST00000582475.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	2381.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATAGGCTCAGAGGCT	5	True	NA	NA	False	NA	NA	NA	21612330	21629479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_21612444_21623747_21623940_21629061
transcript_44226.nic	chr18	-	1188	5	NIC	ENSG00000266010.3	novel	980	4	NA	NA	-101	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	9.08295106229247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	3088	False	NA	-28	True	AATAAA	-14	NA	22169069	22166915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_22167309_22167603_22167804_22168043_22168163_22168310_22168384_22168666
transcript_44228.known	chr18	-	839	4	FSM	ENSG00000266010.3	ENST00000579431.3	980	4	116	25	-6	-2	multi-exon	FALSE	canonical	3	25	junction_2	8.60232526704263	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	3720	False	NA	-28	True	AATAAA	-14	NA	22168437	22166915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_22167309_22167603_22167804_22168043_22168163_22168310
transcript_44229.known	chr18	-	432	4	FSM	ENSG00000266010.3	ENST00000649729.2	835	4	21	382	-14	123	multi-exon	FALSE	canonical	0	0	junction_2	19.4821855949366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCTGGACACTCGATAC	5	True	NA	NA	False	NA	NA	NA	22168445	22167288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_22167309_22167603_22167804_22168085_22168163_22168310
transcript_44230.nic	chr18	-	1302	4	NIC	ENSG00000266010.3	novel	835	4	NA	NA	25	-2	intron_retention	FALSE	canonical	3	23	junction_3	9.39266853573691	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	3214	False	NA	-28	True	AATAAA	-14	NA	22168943	22166915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_22167309_22167603_22168163_22168310_22168384_22168666
transcript_44232.nic	chr18	-	1725	3	NIC	ENSG00000266010.3	novel	872	2	NA	NA	-101	0	intron_retention	FALSE	canonical	3	23	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTGATTCAGACAGAAAA	3088	False	NA	-26	True	AATAAA	-16	NA	22169069	22166913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_22168163_22168310_22168384_22168666
transcript_44233.nic	chr18	-	1221	3	FSM	ENSG00000266010.3	ENST00000691935.1	1217	3	-26	22	-26	-2	multi-exon	FALSE	canonical	3	34	junction_2	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	3578	False	NA	-28	True	AATAAA	-14	NA	22168579	22166915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_22167309_22167603_22168163_22168310
transcript_44234.known	chr18	-	1788	2	FSM	ENSG00000266010.3	ENST00000583490.1	1788	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGGCTGCCTGACGT	3189	False	NA	-10	True	AATAAA	-32	NA	22168968	22166897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_22168384_22168666
transcript_44235.nic	chr18	-	1518	2	FSM	ENSG00000266010.3	ENST00000584201.2	872	2	-148	-498	-26	0	multi-exon	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTGATTCAGACAGAAAA	3578	False	NA	-26	True	AATAAA	-16	NA	22168579	22166913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_22168163_22168310
transcript_44239.known	chr18	+	3275	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	32.7157605391396	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-3	True	NA	15	True	AATACA	-16	NA	22933327	23026486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_44240.known	chr18	+	3293	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	56.3875478767747	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	-32	True	NA	17	True	AATACA	-18	NA	22933825	23026488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_44242.nic	chr18	+	3355	19	NIC	ENSG00000101773.19	novel	3293	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	57.1646960031784	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-15	True	NA	15	True	AATACA	-16	NA	22933842	23026486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_44245.nic	chr18	+	3187	18	NIC	ENSG00000101773.19	novel	3275	19	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_15	61.3160173139022	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-30	True	NA	15	True	AATACA	-16	NA	22933345	23026486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23016827_23016925_23022128_23022271_23026142
transcript_4425.nic	chr1	+	1064	9	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-11	6802	-11	-5910	5prime_fragment	FALSE	canonical	3	294	junction_1	302.475593023636	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	1	True	NA	16	True	AAAACA	-3	NA	70205670	70244815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_44255.known	chr18	+	3260	18	FSM	ENSG00000101773.19	ENST00000399725.6	3260	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.5251034514438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-17	True	NA	15	True	AATACA	-16	NA	22933840	23026486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23022128_23022271_23026142
transcript_4426.nic	chr1	+	1007	9	NIC	ENSG00000116754.14	novel	3959	12	NA	NA	-22	-5910	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	379.395221866328	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	-21	True	NA	16	True	AAAACA	-3	NA	70221347	70244815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_70221401_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_44268.known	chr18	+	2229	11	FSM	ENSG00000101773.19	ENST00000399721.6	2229	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	79.4763486831145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTTAAAATTCCTC	18	True	NA	NA	False	AATAAA	-45	NA	22933875	22993569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_22934265_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747
transcript_44273.known	chr18	+	5283	10	FSM	ENSG00000134508.13	ENST00000256925.12	5283	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	13.7436854187255	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGTTCTTTATCTC	-1	True	NA	16	True	AATAAA	-17	NA	23135484	23260470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_23136608_23188837_23188910_23194447_23194541_23213976_23214055_23234607_23234705_23235894_23236052_23237141_23237246_23252959_23253067_23253728_23253937_23257226
transcript_44275.known	chr18	-	1022	16	FSM	ENSG00000134490.14	ENST00000542162.5	1022	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	33.7599368087876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGACGGTCAAGAGAAA	76	False	NA	NA	False	NA	NA	NA	23437869	23298007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23376826_23376942_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_44276.known	chr18	-	2994	15	FSM	ENSG00000134490.14	ENST00000383233.8	2994	15	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_7	21.2219803265292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACTTGTTTCTGAACC	-16	True	NA	-24	True	AATAAA	-16	NA	23437961	23296012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_4428.nic	chr1	+	1218	8	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	-45	5990	-19	-5910	5prime_fragment	FALSE	canonical	3	1054	junction_2	76.801891983498	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	-18	True	NA	16	True	AAAACA	-3	NA	70221350	70244815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_44290.known	chr18	+	3574	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	14.1074743782625	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	-20	True	NA	19	True	ATTAAA	-21	NA	23453286	23483140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_44293.known	chr18	+	1966	13	FSM	ENSG00000101782.15	ENST00000581585.5	1966	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	36.5105578337737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAACTTGGGTAACAC	-20	True	NA	114	True	NA	NA	NA	23453286	23481580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_23453503_23462963_23463080_23464014_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_44296.nic	chr18	+	640	5	ISM	ENSG00000101782.15	ENST00000577501.5	1904	13	-34	16941	-13	265	5prime_fragment	FALSE	canonical	3	125	junction_3	6.53356717268599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGATATCACCACCAA	34	False	NA	NA	False	AAAAAG	-16	NA	23453273	23464559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518
transcript_44297.known	chr18	+	1904	13	FSM	ENSG00000101782.15	ENST00000577501.5	1904	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	36.7181456806062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAACAGCTATAGGTT	1	True	NA	34	True	AATAAA	-39	NA	23453307	23481500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479325_23479425_23481171
transcript_44298.known	chr18	-	4760	25	FSM	ENSG00000141458.13	ENST00000269228.10	4760	25	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_10	16.782100252617	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCTAACCTGTCCTTA	-38	True	NA	41	True	AATACA	-19	NA	23586506	23531441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23548005_23548109_23551626_23551728_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
transcript_443.known	chr1	-	4303	7	FSM	ENSG00000130764.10	ENST00000378251.3	4303	7	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	21.9063664008637	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCAGATCCTTTCCCA	-1	True	NA	71	True	AATAAA	-17	NA	3796498	3778558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
transcript_44301.known	chr18	-	846	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTTTTCCTGAAAACA	-2	True	NA	-35	True	AATAAA	-15	NA	23662772	23648410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_23649194_23662709
transcript_44308.nic	chr18	+	850	3	ISM	ENSG00000053747.17	ENST00000588770.5	4921	32	53212	62	1580	-62	3prime_fragment	FALSE	canonical	3	14	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGTCTTTTAAGAAACA	1619	False	NA	NA	False	ACTAAA	-5	NA	23951472	23954927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_23951778_23952989_23953110_23954502
transcript_44310.known	chr18	+	1048	2	FSM	ENSG00000168234.13	ENST00000584250.1	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGAGATTCCTTTT	-1	True	NA	6	True	ATTAAA	-18	NA	24014419	24020288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24015039_24019859
transcript_44311.known	chr18	+	533	2	FSM	ENSG00000168234.13	ENST00000577185.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGCTTGAGATTCCT	1859	False	NA	3	True	ATTAAA	-15	NA	24016633	24020285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24016741_24019859
transcript_44312.known	chr18	-	4152	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_17	127.871849429588	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	-4	True	NA	-8	True	AATAAA	-16	NA	24397824	24162051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_44322.nic	chr18	-	1535	16	ISM	ENSG00000141447.19	ENST00000319481.8	4152	28	-44	77293	12	-14278	5prime_fragment	FALSE	canonical	3	113	junction_5	63.0031392515925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCTTGTCAGAAGCAC	NA	False	NA	NA	False	AAGAAA	-5	NA	24397868	24239344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_44325.nic	chr18	-	2817	14	NIC	ENSG00000141447.19	novel	4152	28	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_13	105.0218912091	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	575	False	NA	-8	True	AATAAA	-16	NA	24271635	24162051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271517
transcript_44326.known	chr18	-	3317	14	FSM	ENSG00000141447.19	ENST00000399443.7	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_13	49.0989822620754	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	-22	True	NA	-1	True	AATAAA	-23	NA	24272232	24162044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
transcript_4433.known	chr1	+	617	3	FSM	ENSG00000116754.14	ENST00000463877.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAGGTCTGTTATTAT	-15	True	NA	NA	False	NA	NA	NA	70205697	70228727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70205781_70221611_70221840_70228421
transcript_44340.nic	chr18	-	1849	6	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	119.4061974941	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	24397868	24357124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_24358512_24366891_24366967_24368366_24368373_24368545_24368590_24377412_24377536_24397654
transcript_44341.known	chr18	-	588	5	FSM	ENSG00000141447.19	ENST00000582350.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	117.178016282919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATATTGGCCAGACTG	36	True	NA	NA	False	NA	NA	NA	24397784	24347664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24347839_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_44343.known	chr18	-	1887	5	FSM	ENSG00000141447.19	ENST00000399441.4	1887	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	102.942945362953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	32	True	NA	-13	True	AATAAA	-15	NA	24397788	24357124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397572
transcript_44344.nic	chr18	-	1885	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	79.6821811950451	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	24397868	24357124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_44348.nnic	chr18	-	1533	5	NNC	ENSG00000141447.19	novel	1002	5	NA	NA	12	4078	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	118.878877434135	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGACTTTGTGGGGTTT	NA	False	NA	0	True	AATAAA	-26	NA	24397868	24362326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_24363362_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_4435.known	chr1	+	1408	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	0	413	0	-333	5prime_fragment	FALSE	canonical	3	44	junction_9	345.196306469232	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	27	False	NA	-6	True	CATAAA	-22	NA	70221395	70250392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364
transcript_44350.nnic	chr18	-	1812	4	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	12	2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	136.090656059359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCATCATTTTTCTT	NA	False	NA	-11	True	AATAAA	-17	NA	24397868	24357122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_24358512_24368286_24368373_24377412_24377536_24397654
transcript_44351.nic	chr18	-	1243	4	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-84	18482	12	258	5prime_fragment	FALSE	canonical	3	254	junction_1	25.74662868977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGAGTTTTGTGGGCT	NA	False	NA	-7	True	AATAAA	-14	NA	24397868	24366146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_24366967_24368286_24368373_24377412_24377536_24397654
transcript_44353.nic	chr18	-	776	3	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-84	20269	12	0	5prime_fragment	FALSE	canonical	3	275	junction_1	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAACAATGTCACA	NA	False	NA	-17	True	AATAAA	-7	NA	24397868	24367933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_24368373_24377412_24377536_24397654
transcript_44354.nic	chr18	-	604	3	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-84	20441	12	-172	5prime_fragment	FALSE	canonical	3	275	junction_1	20.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTGTATGTTTAATC	NA	False	NA	NA	False	AATAAA	-27	NA	24397868	24368105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_24368373_24377412_24377536_24397654
transcript_44356.known	chr18	+	1305	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	10.0717426496113	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	0	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
transcript_44357.known	chr18	+	824	6	FSM	ENSG00000154040.21	ENST00000415309.6	824	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.0466304267217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTTGTATTGCTTTTT	6	True	NA	25	True	AATAAA	-15	NA	24139067	24161599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159945_24160070_24161515
transcript_44358.known	chr18	+	2226	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	17.0105849399719	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	33	False	NA	23	True	AATAAA	-13	NA	24139094	24161597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
transcript_44361.nic	chr18	+	2859	5	ISM	ENSG00000154040.21	ENST00000399496.8	1305	6	-108	0	-33	0	intron_retention	FALSE	canonical	3	63	junction_4	7.75806032459145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	NA	False	NA	26	True	AATAAA	-16	NA	24138953	24161600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471
transcript_44362.nic	chr18	+	2487	5	ISM	ENSG00000154040.21	ENST00000621648.4	2226	6	-141	1326	-33	6	5prime_fragment	FALSE	canonical	3	36	junction_4	18.3098334236006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCATGCCAAGGATTTG	NA	False	NA	9	True	AATAAA	-27	NA	24138953	24160271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471
transcript_44363.nic	chr18	+	3706	5	ISM	ENSG00000154040.21	ENST00000621648.4	2226	6	-33	-1	0	1	intron_retention	FALSE	canonical	3	36	junction_4	18.3098334236006	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTTGTATTGCTTTT	0	True	NA	24	True	AATAAA	-14	NA	24139061	24161598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471
transcript_44366.known	chr18	+	1109	4	FSM	ENSG00000154040.21	ENST00000327201.10	1109	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	25.6645020732269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	16	False	NA	23	True	AATAAA	-13	NA	24139031	24161597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24155700_24156043_24159471_24160070_24161515
transcript_44368.known	chr18	+	1622	3	FSM	ENSG00000154040.21	ENST00000627314.1	1622	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTTATGTGATGGGCGA	7	True	NA	NA	False	NA	NA	NA	24138986	24159662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24139119_24155700_24157000_24159471
transcript_44370.known	chr18	+	3203	12	FSM	ENSG00000154059.11	ENST00000648078.1	3203	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	88.8536730057434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	NA	False	NA	10	True	NA	NA	NA	24426633	24453510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450815_24451360
transcript_44373.known	chr18	+	3734	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	24.0590939147758	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	3	True	NA	31	True	AATAAA	-20	NA	24426669	24453531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
transcript_4438.known	chr1	-	5658	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	22.3619220004801	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGTTCAGCATATTA	-9	True	NA	-16	True	AATAAA	-20	NA	70354722	70258998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_44381.known	chr18	-	3402	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_3	240.498669434989	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-2	True	NA	-22	True	AATAAA	-17	NA	26090613	26016252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_44382.known	chr18	-	2321	11	FSM	ENSG00000141380.14	ENST00000542420.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	287.451995992374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTTACAAACCTTTG	-17	True	NA	-13	True	ATTAAA	-13	NA	26091217	26017342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_44385.known	chr18	-	1840	11	FSM	ENSG00000141380.14	ENST00000579640.5	1840	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	260.933114034996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGCATCAGAAATCCTC	1	True	NA	NA	False	NA	NA	NA	26090610	26017884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26082362_26082529_26087500_26087578_26090500
transcript_44390.known	chr18	-	1836	10	FSM	ENSG00000141380.14	ENST00000269137.11	1836	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_3	68.7509371428833	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTAATACTTTTCCAC	299	False	NA	NA	False	NA	NA	NA	26090901	26018013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_44392.nic	chr18	-	3320	10	NIC	ENSG00000141380.14	novel	3402	11	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_9	214.935132333249	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-19	True	NA	-22	True	AATAAA	-17	NA	26091219	26016252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_44398.known	chr18	-	11379	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	73.053405122554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCCTGTGCATATTTC	-9	True	NA	-5	True	AATAAA	-23	NA	27185308	26906480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_444.known	chr1	-	5295	21	FSM	ENSG00000116198.14	ENST00000674544.1	5295	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	20.4887164068421	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATACACACATATAC	12	True	NA	NA	False	AATATA	-4	NA	3857194	3813030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3852294_3852422_3856888
transcript_44404.nnic	chr18	-	734	6	NNC	ENSG00000154080.14	novel	11379	6	NA	NA	-30	-19906	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	137.163260387029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGTATATGCCTTGCT	4	True	NA	NA	False	AATAAA	-21	NA	27185338	26935684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_26935880_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_44405.known	chr18	-	2033	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	121.520317231317	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTGGACTTAGGCA	1	True	NA	-5	True	GATAAA	-13	NA	27185298	26915778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_44406.known	chr18	-	2043	5	FSM	ENSG00000154080.14	ENST00000581714.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	80.9826370279457	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGGACTTAGGCATT	10	True	NA	-3	True	GATAAA	-15	NA	27143038	26915776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688
transcript_44415.known	chr18	-	4016	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_11	59.2315981737976	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	-10	True	NA	-11	True	AATAAA	-20	NA	28177130	27950965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
transcript_44420.known	chr18	+	5697	15	FSM	ENSG00000046604.14	ENST00000261590.13	5697	15	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_11	68.8616255209515	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGGGGTACTTGGCAT	-35	True	NA	26	True	AATAAA	-29	NA	31498176	31549008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447_31524586_31524702_31524889_31530986_31531253_31535269_31535413_31536201_31536430_31538750_31538979_31541192_31541315_31542519_31542853_31545720
transcript_44424.nnic	chr18	+	773	2	Antisense	novelGene_ENSG00000153339.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTCTAATCAACAGATA	NA	False	NA	14	True	AATAAA	-18	NA	31819211	31829908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr18_+_31819445_31829368
transcript_44426.nnic	chr18	+	2430	2	Antisense	novelGene_ENSG00000153339.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGTGTGTTTGGATT	-2	True	NA	16	True	AATAAA	-35	NA	31819346	31831700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr18_+_31819445_31829368
transcript_44428.known	chr18	-	666	1	FSM	ENSG00000276282.1	ENST00000616300.1	666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGAATGTGTTGCCGTG	NA	False	NA	NA	False	AATAAA	-14	NA	31896410	31895744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_31895700_31896400
transcript_44430.nnic	chr18	+	3522	9	NNC	ENSG00000134758.14	novel	3551	8	NA	NA	-19	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	185.783307915431	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	-35	True	NA	10	True	ATTAAA	-16	NA	32091854	32131561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118_32130977_32131024
transcript_44433.known	chr18	+	3551	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	76.3653944492383	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	-16	True	NA	10	True	ATTAAA	-16	NA	32091873	32131561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_44437.nnic	chr18	+	3226	8	NNC	ENSG00000134758.14	novel	3551	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	194.806025972253	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	605	False	NA	10	True	ATTAAA	-16	NA	32092614	32131561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118_32130977_32131024
transcript_44441.nic	chr18	+	2428	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	741	846	5	0	3prime_fragment	FALSE	canonical	3	484	junction_2	42.3110177403265	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	605	False	NA	13	True	AATAAA	-15	NA	32092614	32130715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_44442.nic	chr18	+	2525	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	741	749	5	97	3prime_fragment	FALSE	canonical	3	484	junction_2	42.3110177403265	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGCCTTTGTTCTGTCA	605	False	NA	14	True	AAGAAA	-20	NA	32092614	32130812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_44443.nic	chr18	+	3274	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	741	0	5	0	3prime_fragment	FALSE	canonical	3	484	junction_2	42.3110177403265	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	605	False	NA	10	True	ATTAAA	-16	NA	32092614	32131561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_44445.known	chr18	+	5573	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	14.0370937162933	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTACTATTTTACTC	-5	True	NA	45	True	ATTAAA	-31	NA	32018824	32073219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
transcript_44456.known	chr18	+	2071	5	FSM	ENSG00000134758.14	ENST00000257190.9	2071	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	223.449518907515	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	9	True	NA	13	True	AATAAA	-15	NA	32092689	32130715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_44462.known	chr18	-	1930	10	FSM	ENSG00000101746.16	ENST00000590712.5	1930	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.23560439523579	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCATAAAAGGCTATCTA	1713	False	NA	NA	False	CATAAA	-6	NA	34223205	33852588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_33853036_33883243_33883425_33943064_33943179_33958238_33958419_34019317_34019602_34093464_34093598_34104046_34104160_34105048_34105161_34129870_34130021_34222989
transcript_44463.known	chr18	+	3353	22	FSM	ENSG00000134769.23	ENST00000684359.1	3353	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.994476868821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTTGGAACCTC	28	True	NA	-59	True	NA	NA	NA	34493360	34891280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34875238_34875399_34877718_34877809_34879550_34879720_34882068_34882202_34884727_34884777_34890299
transcript_44464.known	chr18	+	2671	17	FSM	ENSG00000134769.23	ENST00000598774.6	2671	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.0699424515677	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAATTAAA	-2	True	NA	NA	False	NA	NA	NA	34493330	34866980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_44468.known	chr18	+	1706	13	FSM	ENSG00000134769.23	ENST00000315456.10	1706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	36.8567045009001	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	-16	True	NA	13	True	AATAAA	-20	NA	34493316	34829328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34829040
transcript_44472.known	chr18	+	4212	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_4	19.6638416050035	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGGAGTTACAGATT	-10	True	NA	18	True	AATAAA	-21	NA	35041412	35143470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
transcript_44474.known	chr18	+	1419	6	FSM	ENSG00000186812.13	ENST00000261333.10	1419	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	9.70360757656656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTTGGAGGGTGAAT	8	True	NA	9	True	AATAAA	-20	NA	35241054	35258394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261_35245352_35254231_35254403_35257927
transcript_44481.known	chr18	+	2162	5	FSM	ENSG00000186812.13	ENST00000355632.8	2162	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	12.9711217710728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCCAGGCTGGAGTGCA	8	True	NA	NA	False	NA	NA	NA	35241054	35259227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35254231_35254403_35257927
transcript_44482.nnic	chr18	+	2261	5	NNC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.5772612281053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	-11	True	NA	NA	False	ACTAAA	-14	NA	35241035	35246723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_35241110_35241601_35241691_35242390_35242885_35243151_35243294_35245261
transcript_44488.known	chr18	+	5259	4	FSM	ENSG00000186812.13	ENST00000330501.12	5259	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	9.93310961716756	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	-13	True	NA	14	True	ATTAAA	-18	NA	35241033	35249808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261
transcript_44494.nic	chr18	+	2134	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	14.8174071805952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	-11	True	NA	NA	False	ACTAAA	-14	NA	35241035	35246723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_35241072_35242390_35242885_35243151_35243294_35245261
transcript_44498.nic	chr18	+	2753	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	10.3708994574027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	-11	True	NA	NA	False	ACTAAA	-14	NA	35241035	35246723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_35241691_35242390_35242885_35243151_35243294_35245261
transcript_4450.nic	chr1	-	2447	11	ISM	ENSG00000118454.13	ENST00000370944.9	5658	13	-19	15001	-7	-11726	5prime_fragment	FALSE	canonical	3	161	junction_6	23.4965954980716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTGTGTTCCTTGTT	-28	True	NA	NA	False	AATAAA	-23	NA	70354741	70273999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_44501.known	chr18	+	1516	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACAGTGTATTCAAT	-10	True	NA	5	True	ATTAAA	-17	NA	35241036	35244100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390_35242885_35243151
transcript_44505.known	chr18	+	2046	3	FSM	ENSG00000186812.13	ENST00000585800.1	2046	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCCTATTAAAGACTG	10	True	NA	-26	True	NA	NA	NA	35241056	35244069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241691_35242390_35242885_35243151
transcript_44508.known	chr18	+	690	2	FSM	ENSG00000186812.13	ENST00000589630.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGCCATACTTGTCT	-17	True	NA	NA	False	GATAAA	-39	NA	35241029	35243000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35241110_35242390
transcript_44512.known	chr18	+	5124	3	FSM	ENSG00000257267.4	ENST00000399070.3	5124	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	38.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGGTTCCTGTTGAA	NA	False	NA	6	True	AATAAA	-17	NA	35290281	35310766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35290392_35291009_35291233_35305975
transcript_44520.known	chr18	+	2191	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	42	0	12	0	multi-exon	FALSE	canonical	3	121	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCACC	23	False	NA	NA	False	NA	NA	NA	35290335	35308110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35290392_35305975
transcript_44524.known	chr18	-	6256	4	FSM	ENSG00000172466.16	ENST00000261332.11	6256	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	103.022111973865	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	17	True	NA	-20	True	AATAAA	-21	NA	35344420	35332226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344359
transcript_44525.known	chr18	-	6282	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	8.04155872120988	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	15	False	35344471	-20	True	AATAAA	-21	NA	35344456	35332226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
transcript_44526.nnic	chr18	-	1478	4	NNC	ENSG00000172466.16	novel	6256	4	NA	NA	-16022	3022	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	113.862490165404	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGCACTCAGGTCTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	35361504	35337212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_35337771_35339828_35339977_35340230_35340734_35361235
transcript_4453.known	chr1	-	3327	12	FSM	ENSG00000118454.13	ENST00000262346.6	3327	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	60.9668654080719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTCCATACTGATACAT	-21	True	NA	-15	True	AATAAA	-15	NA	70354734	70261236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70336057_70336100_70353978
transcript_44530.known	chr18	-	3661	4	FSM	ENSG00000186496.12	ENST00000589332.7	3661	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATTGTTTTCTGGCTT	-17	True	NA	NA	False	AGTAAA	-16	NA	35377337	35366693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35369661_35373455_35373601_35373875_35374365_35377277
transcript_44533.known	chr18	-	904	7	FSM	ENSG00000153391.16	ENST00000441607.6	904	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	121.652510591986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTAGTGTG	1	True	NA	-8	True	NA	NA	NA	35497943	35468462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385_35487440_35489331_35489386_35497718
transcript_44534.nnic	chr18	-	772	6	Fusion	ENSG00000153391.16_ENSG00000267583.5	novel	789	3	NA	NA	-4	0	multi-exon	FALSE	canonical	3	12	junction_2	124.60112359044	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTTTGG	55	False	35497983	0	True	AATAAA	-19	NA	35497964	35443868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr18_-_35444023_35446874_35446956_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_44538.known	chr18	-	3245	5	FSM	ENSG00000153391.16	ENST00000592173.5	3245	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	109.245995349944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTCACTTGGTCATG	11	True	NA	-9	True	AATAAA	-20	NA	35497933	35452229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35454969_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_44540.known	chr18	-	408	5	FSM	ENSG00000153391.16	ENST00000591139.1	408	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	105.47126385893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCACCATTGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	35487470	35468710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385
transcript_44541.nnic	chr18	-	1044	5	NNC	ENSG00000153391.16	novel	943	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	109.349211245441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCCCTGAATTTTT	-19	True	NA	-4	True	AATAAA	-18	NA	35497638	35468332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497295
transcript_44542.known	chr18	-	943	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	18.7533330370897	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCCCTGAATTTTT	-16	True	NA	-4	True	AATAAA	-18	NA	35497960	35468332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_44544.known	chr18	-	455	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTATGGTATTTT	4	True	NA	-2	True	AATAAA	-17	NA	35497940	35443870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35444023_35446874_35446956_35497718
transcript_44545.known	chr18	-	382	3	FSM	ENSG00000153391.16	ENST00000587450.1	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGACGTCGTCACCGG	-16	True	NA	NA	False	NA	NA	NA	35497960	35468670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35478281_35478350_35497718
transcript_44546.known	chr18	-	595	2	FSM	ENSG00000153391.16	ENST00000590757.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAGTCCCTGAATTTT	115	False	NA	-5	True	AATAAA	-17	NA	35497904	35468333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35468743_35497718
transcript_44549.known	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	27.5590275590413	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	1	True	NA	14	True	TATAAA	-19	NA	35972678	35979278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
transcript_44556.known	chr18	+	703	4	FSM	ENSG00000141428.17	ENST00000269194.10	703	4	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	124.408824267234	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGATTCCAAAGGTGG	NA	False	NA	NA	False	ACTAAA	-25	NA	35972633	35978939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
transcript_44559.known	chr18	+	958	4	FSM	ENSG00000141428.17	ENST00000333234.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	15.121728296285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	72	False	NA	14	True	TATAAA	-19	NA	35972784	35979278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_35972908_35974895_35975096_35977409_35977601_35978834
transcript_4456.nic	chr1	+	883	4	FSM	ENSG00000197568.15	ENST00000689607.1	868	4	-11	-4	-4	0	multi-exon	FALSE	canonical	3	19	junction_2	8.9938250421547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-40	True	NA	14	True	ATTAAA	-22	NA	70354781	70368023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355112_70366443_70366538_70366932_70366985_70367616
transcript_44561.known	chr18	-	1945	9	FSM	ENSG00000141425.18	ENST00000590898.5	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	305.076937017533	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	24	True	NA	-2	True	AATAAA	-25	NA	36067530	35989823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_44564.known	chr18	-	1850	8	FSM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	220.065852852815	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-2	True	NA	-64	True	NA	NA	NA	36067556	35989885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_44565.known	chr18	-	1264	8	FSM	ENSG00000141425.18	ENST00000588737.5	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	291.551934674159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAACGAGTAATTTATA	-5	True	NA	NA	False	AAGAAA	-12	NA	36067559	35993039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_44569.known	chr18	-	4421	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	88.6655701686587	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-5	True	NA	-2	True	AATAAA	-25	NA	36067559	35989823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_4457.known	chr1	+	832	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	31	0	-15	0	multi-exon	FALSE	canonical	3	19	junction_2	7.1336448530109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7	True	NA	14	True	ATTAAA	-22	NA	70354828	70368023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
transcript_44573.known	chr18	-	1022	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	255.899340019122	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-3	True	NA	-32	True	AATAAA	-13	NA	36067557	36025598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_44576.nic	chr18	-	2327	7	ISM	ENSG00000141425.18	ENST00000588737.5	1264	8	-23	32559	-6	0	5prime_fragment	FALSE	canonical	3	44	junction_5	314.846523457594	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-28	True	NA	-32	True	AATAAA	-13	NA	36067582	36025598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_44580.nic	chr18	-	3560	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-38	34433	-18	570	5prime_fragment	FALSE	canonical	3	626	junction_5	60.2547923405267	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAACCAGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	36067594	36024318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_44583.nic	chr18	-	2280	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-38	35713	-18	0	5prime_fragment	FALSE	canonical	3	626	junction_5	60.2547923405267	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	NA	False	NA	-32	True	AATAAA	-13	NA	36067594	36025598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_44589.known	chr18	-	3003	10	FSM	ENSG00000141424.13	ENST00000590986.5	3003	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	67.0910566062513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTGGGGAGGCAT	-20	True	NA	NA	False	AATAAA	-17	NA	36129381	36109147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129100
transcript_44590.known	chr18	-	3566	10	FSM	ENSG00000141424.13	ENST00000269187.10	3566	10	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	28.4179564169132	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	21	True	NA	-6	True	AATAAA	-19	NA	36129340	36108530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129113
transcript_44592.nic	chr18	-	2821	9	NIC	ENSG00000141424.13	novel	3566	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	77.5914782692017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-32	True	NA	-6	True	AATAAA	-19	NA	36129393	36108530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36129113
transcript_44595.nnic	chr18	-	1216	2	FSM	ENSG00000288917.1	ENST00000690777.1	909	2	-41	-266	-41	266	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTTTAAAAAAAAAATTAAG	-20	True	NA	NA	False	NA	NA	NA	36129381	36127779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36128728_36129113
transcript_44596.known	chr18	+	2722	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	167.168865977089	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	-12	True	NA	27	True	AATAAA	-23	NA	36129897	36174651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_446.known	chr1	+	2833	7	FSM	ENSG00000169598.17	ENST00000378209.8	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	5.61001089323561	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3	True	NA	NA	False	AATAAA	-18	NA	3857475	3885429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_4460.nic	chr1	+	1073	4	FSM	ENSG00000197568.15	ENST00000486110.2	1095	4	22	0	8	0	multi-exon	FALSE	canonical	1	1	junction_1	32.4995726467629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-2	True	NA	14	True	ATTAAA	-22	NA	70354819	70368023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355209_70366145_70366329_70366443_70366538_70367616
transcript_44602.known	chr18	+	8432	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	50.1900243948221	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	-11	True	NA	10	True	AATAAA	-22	NA	36129898	36180557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_44604.known	chr18	+	2542	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_18	125.927272679651	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	-9	True	NA	27	True	NA	NA	NA	36129900	36174721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
transcript_44608.nnic	chr18	+	2392	21	NIC	ENSG00000134759.14	novel	8432	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_19	127.816460207596	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	-11	True	NA	27	True	AATAAA	-23	NA	36129898	36174651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36171046_36171161_36174484
transcript_4461.known	chr1	+	802	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	13	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	16.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-11	True	NA	14	True	ATTAAA	-22	NA	70354810	70368023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355112_70366443_70366538_70367616
transcript_44616.known	chr18	+	2453	21	FSM	ENSG00000134759.14	ENST00000351393.10	2453	21	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	132.342699080833	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTACATGCTTGCAGT	-19	True	NA	24	True	AATAAA	-20	NA	36129890	36174648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_4462.known	chr1	+	692	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	19	112	7	-108	multi-exon	FALSE	canonical	3	36	junction_1	19	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTACCCAAATCCTATAAA	-17	True	NA	-98	True	NA	NA	NA	70354804	70367911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355108_70366443_70366538_70367616
transcript_44626.known	chr18	+	2288	20	FSM	ENSG00000134759.14	ENST00000542824.5	2288	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	182.459891999216	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTACATGCTTGCAGT	14	True	NA	24	True	AATAAA	-20	NA	36129923	36174648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_4463.known	chr1	+	898	3	FSM	ENSG00000197568.15	ENST00000359875.9	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-10	True	NA	14	True	ATTAAA	-22	NA	70354811	70368023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70355209_70366443_70366538_70367616
transcript_44649.known	chr18	+	583	3	FSM	ENSG00000134759.14	ENST00000541190.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTAAGTTTTTTTCT	-16	True	NA	NA	False	NA	NA	NA	36129893	36136632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36130072_36133237_36133317_36136306
transcript_44651.known	chr18	-	609	2	FSM	ENSG00000260552.2	ENST00000568654.2	620	2	11	0	2	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATTTTTTTTCACA	-17	True	NA	NA	False	AATAAA	-30	NA	36187448	36179995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36180391_36187234
transcript_44652.known	chr18	+	674	4	FSM	ENSG00000134759.14	ENST00000541748.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_1	60.7014552269274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGCTTGCAGTCACTG	NA	False	NA	29	True	AATAAA	-25	NA	36166965	36174653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36167223_36170062_36170197_36171046_36171161_36174484
transcript_44654.known	chr18	+	4853	10	FSM	ENSG00000150477.15	ENST00000280020.10	4853	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	13.1824799555235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTTGATATTGAATT	2	True	NA	12	True	AATAAA	-25	NA	36829126	37225334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_37066889_37067546_37160199_37160382_37172972_37173082_37222016
transcript_44656.known	chr18	+	1190	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	4.18330013267038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTTGTAATTGGTA	4	True	NA	NA	False	ATTAAA	-19	NA	36829128	36886404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
transcript_44661.nic	chr18	-	1782	8	NIC	ENSG00000134779.15	novel	3835	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	521.350365955211	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	315	False	NA	-26	True	TATAAA	-17	NA	36828844	36796071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36823802_36823872_36828682
transcript_44662.known	chr18	-	1268	7	FSM	ENSG00000134779.15	ENST00000614939.4	1268	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	451.853098055355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGTGTACATGTATG	NA	False	NA	0	True	AATAAA	-43	NA	36829216	36780026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36780189_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_44665.known	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	396.556322187236	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-1	True	NA	-8	True	AATAAA	-16	NA	36828842	36786572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_44666.known	chr18	-	3835	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	0	0	0	multi-exon	FALSE	canonical	3	998	junction_1	99.5020937803153	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-3	True	NA	-8	True	ACTAAA	-20	NA	36829002	36794107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_44669.known	chr18	-	1102	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_2	42.3650799597971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTCCTTTTTTC	13	True	NA	-19	True	CATAAA	-14	NA	36828781	36798017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_44670.known	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	476.304356478082	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	13	True	NA	-26	True	TATAAA	-17	NA	36828986	36796071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
transcript_44673.known	chr18	-	579	2	FSM	ENSG00000101489.20	ENST00000590011.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGGCTGGGGCAAGTGG	-11	True	NA	NA	False	GGGGCT	-22	NA	37253981	37244833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_37245198_37253766
transcript_44677.nic	chr18	-	3279	9	NIC	ENSG00000267313.7	novel	1713	6	NA	NA	-29	-1233	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	5.9791303715507	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTCCACAGGATACACA	NA	False	NA	NA	False	NA	NA	NA	41632214	41467015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_41467781_41480755_41481268_41481881_41481958_41482444_41482578_41501119_41501277_41516419_41516556_41520383_41521497_41525354_41525527_41631999
transcript_4468.known	chr1	+	2090	12	FSM	ENSG00000116761.12	ENST00000370938.8	2090	12	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	27.6877512674456	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAATGGCGTGAAACC	6	True	NA	NA	False	NA	NA	NA	70411267	70439851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_44685.nnic	chr18	-	796	4	NIC	ENSG00000267313.7	novel	549	5	NA	NA	-24	-1648	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGCCATGCTCTGGG	NA	False	NA	4	True	AATAAA	-16	NA	41632152	41467430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_41467781_41501119_41501277_41516419_41516556_41631999
transcript_44692.known	chr18	+	9415	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_15	19.4415077147381	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	6	True	NA	NA	False	AATAAA	-20	NA	41955233	42087830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_44695.nic	chr18	+	2849	24	NIC	ENSG00000078142.14	novel	9415	25	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_21	30.6829632598375	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCTTATTTATGTAC	-31	True	NA	11	True	AATAAA	-13	NA	41955196	42081396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42064739_42064831_42067387_42067514_42081122
transcript_44696.known	chr18	+	9206	24	FSM	ENSG00000078142.14	ENST00000398870.7	9206	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31.2694854184792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	26	True	NA	NA	False	AATAAA	-20	NA	41955253	42087830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_41955360_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_44704.known	chr18	-	3936	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.87400787401181	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTCAATGCAGACTTT	-1	True	NA	-13	True	AATAAA	-18	NA	43277490	43267891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
transcript_44705.known	chr18	-	3000	15	FSM	ENSG00000152229.18	ENST00000409746.5	3000	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.57644813704038	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCGTATTTTTGTGT	13	True	NA	-2	True	AATAAA	-20	NA	46072260	45983535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_45985451_45988701_45988760_45990721_45990757_45991901_45991984_45992105_45992203_45993604_45993704_45997748_45997829_45998793_45998840_45999435_45999535_46005468_46005532_46011180_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
transcript_44707.known	chr18	-	2214	12	FSM	ENSG00000152234.16	ENST00000586592.5	2214	12	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_11	1812.47732844185	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	5962	False	NA	-16	True	AATAAA	-14	NA	46098315	46084149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46097835
transcript_4471.nnic	chr1	+	1876	12	NNC	ENSG00000116761.12	novel	2090	12	NA	NA	-4	278	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	100.014048599961	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTGATTTTTTTGCA	-8	True	NA	14	True	TTTAAA	-21	NA	70411213	70439510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_70411657_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_44712.known	chr18	-	1931	12	FSM	ENSG00000152234.16	ENST00000590156.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	1871.69721009596	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-7	True	NA	-16	True	AATAAA	-14	NA	46098295	46084149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46094979_46095132_46098171
transcript_44714.known	chr18	+	1079	10	FSM	ENSG00000152240.13	ENST00000593165.5	1079	10	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_2	626.744321429755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCATAATTGATAGA	46	False	NA	-64	True	NA	NA	NA	46104421	46128239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46109646_46109785_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_44718.known	chr18	+	1072	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_4	145.328883485011	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	9	True	NA	30	True	ATTAAA	-16	NA	46104384	46128333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_4472.nnic	chr1	+	1936	12	NNC	ENSG00000116761.12	novel	2090	12	NA	NA	-4	-281	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	100.014048599961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACCATAAGCCGAAAATC	-8	True	NA	16	True	ATTAAA	-19	NA	70411213	70439570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_70411657_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_44722.known	chr18	+	1098	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	500.269411792286	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGTTTCTGTGTGGT	20	True	NA	27	True	ATTAAA	-13	NA	46104395	46128330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_44739.known	chr18	+	616	7	FSM	ENSG00000152240.13	ENST00000589554.5	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	579.247116714639	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTACAGAGTTCTT	30	True	NA	NA	False	AATAAA	-30	NA	46104405	46128169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_4474.known	chr1	+	1196	11	FSM	ENSG00000116761.12	ENST00000346806.2	1196	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	104.561417358412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCAAAATTTTCAAGC	121	False	NA	NA	False	ATTAAA	-16	NA	70411382	70439204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_44742.known	chr18	+	506	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	614.238520446251	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTCTTTTTCCTCTTG	26	True	NA	NA	False	AATAAA	-40	NA	46104401	46128179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_44746.known	chr18	+	5456	5	FSM	ENSG00000152242.11	ENST00000615052.5	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	56.4136508302733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGAGGTTTTTTTT	3	True	NA	11	True	AATAAA	-23	NA	46174033	46266992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46174331_46215810_46216596_46240004_46240188_46253696_46253824_46262928
transcript_44749.known	chr18	+	5264	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	30.8796948747159	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	3	True	NA	2	True	AATAAA	-14	NA	46174033	46266983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
transcript_44750.nnic	chr18	-	308	2	Antisense	novelGene_ENSG00000141622.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATCCAAAGAATTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	46433551	46429231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr18_-_46429415_46433426
transcript_44752.known	chr18	+	1818	3	FSM	ENSG00000270112.4	ENST00000656102.1	1818	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACACACGAATGCCAAC	-2	True	NA	NA	False	NA	NA	NA	46756936	46768600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46757032_46759810_46760267_46767333
transcript_44755.known	chr18	-	11243	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	61.9273290465545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGCTTTCATTGGTCA	-23	True	NA	NA	False	ATTAAA	-31	NA	46917507	46803217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_44758.nic	chr18	-	1914	14	NIC	ENSG00000078043.16	novel	4543	13	NA	NA	15	-160	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	118.402582732106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGGAGTGGAAAACAGC	2740	False	NA	-7	True	AATAAA	-15	NA	46917405	46818350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46903526_46903636_46917321
transcript_44761.known	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	61.5559817474215	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-19	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_44763.known	chr18	-	1838	11	FSM	ENSG00000078043.16	ENST00000590127.5	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	24.8427051667084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTGTGAGGTATTTA	10	True	NA	NA	False	NA	NA	NA	46917474	46827757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_44766.nnic	chr18	+	1011	3	FSM	ENSG00000289168.1	ENST00000688277.1	1001	3	-12	2	-5	-2	multi-exon	FALSE	canonical	3	9	junction_2	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868634	46875565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868693_46868811_46868969_46874769
transcript_44768.nnic	chr18	+	913	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-9	318	-5	-122	multi-exon	FALSE	canonical	3	44	junction_1	29.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	NA	False	NA	24	True	NA	NA	NA	46868634	46875445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_44770.nnic	chr18	+	1033	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-9	198	-5	-2	multi-exon	FALSE	canonical	3	44	junction_1	29.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868634	46875565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_44773.nnic	chr18	+	1023	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-3	122	0	-122	multi-exon	FALSE	canonical	3	103	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	NA	False	NA	24	True	NA	NA	NA	46868643	46875445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868991_46874769
transcript_44775.nnic	chr18	+	1198	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-58	2	-51	-2	multi-exon	FALSE	canonical	3	103	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868588	46875565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868991_46874769
transcript_44778.nnic	chr18	+	1878	2	FSM	ENSG00000289168.1	ENST00000687124.1	467	2	-12	-1399	-5	1399	multi-exon	FALSE	canonical	3	44	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAACTC	NA	False	NA	NA	False	NA	NA	NA	46868634	46870631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46868693_46868811
transcript_44783.known	chr18	+	2893	16	FSM	ENSG00000167216.19	ENST00000356157.12	2893	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_13	11.712481471585	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	-1	True	NA	NA	False	AATAAA	-16	NA	46946834	47102243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_44784.nic	chr18	+	1977	16	NIC	ENSG00000167216.19	novel	2893	16	NA	NA	0	22	combination_of_known_junctions	FALSE	canonical	2	9	junction_13	12.171003793169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTAATGTTACTCAT	0	True	NA	8	True	CATAAA	-15	NA	46946796	47101292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_46946924_47046456_47046528_47052879_47053047_47054398_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_44786.known	chr18	+	2833	15	ISM	ENSG00000167216.19	ENST00000245121.10	3618	17	29222	0	-11	0	3prime_fragment	FALSE	canonical	0	0	junction_1	14.4016722385043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	-12	True	NA	NA	False	AATAAA	-16	NA	46946823	47102243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_46946924_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_44788.nic	chr18	+	1368	13	ISM	ENSG00000167216.19	ENST00000356157.12	2893	16	-38	24701	0	0	5prime_fragment	FALSE	canonical	3	24	junction_3	6.2893207547044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	0	True	NA	11	True	AATAAA	-22	NA	46946796	47077542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_44789.nic	chr18	+	1365	13	NIC	ENSG00000167216.19	novel	2893	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	7.74596669241483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	0	True	NA	11	True	AATAAA	-22	NA	46946796	47077542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_46946924_47046456_47046528_47052879_47053047_47054398_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_44799.nic	chr18	-	2259	8	NIC	ENSG00000167220.12	novel	2185	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	246.036997383793	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTGTTTTTGTTTTTG	5634	False	NA	-9	True	AATAAA	-15	NA	47150512	47107409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47137234_47137297_47150377
transcript_448.known	chr1	-	1927	5	FSM	ENSG00000198912.12	ENST00000679703.1	1927	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	147.831618742406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	-18	True	NA	-30	True	AATACA	-14	NA	3900278	3889152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3890074_3890568_3891058_3891625_3891780_3892740_3892997_3900171
transcript_4480.known	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	207.628249523036	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	16	True	NA	-10	True	AATAAA	-17	NA	71081011	71063336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_44807.known	chr18	-	2224	7	FSM	ENSG00000167220.12	ENST00000588183.5	2224	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	169.707264298131	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	-20	True	NA	-7	True	AATAAA	-17	NA	47150500	47107407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136301_47136450_47150377
transcript_44808.known	chr18	-	2185	7	FSM	ENSG00000167220.12	ENST00000300605.11	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	202.81415959773	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTGTTTTTGTTTTTG	-20	True	NA	-9	True	AATAAA	-15	NA	47150500	47107409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47150377
transcript_44820.known	chr18	-	788	4	FSM	ENSG00000167220.12	ENST00000587841.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	247.968187923819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGTTCTCTGCTGTCTC	4	True	NA	NA	False	GGGGCT	-25	NA	47150476	47108377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47150377
transcript_44822.known	chr18	-	3679	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	38.5	466	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTCATTGATTTAT	-28	True	NA	NA	False	AGTAAA	-20	NA	47176364	47152833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47156233_47157435_47157538_47176186
transcript_44828.nic	chr18	-	2218	12	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_11	84.3607954067107	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTAATGTGTTC	-8	True	NA	3	True	AATAAA	-36	NA	47930872	47841224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
transcript_44834.nic	chr18	-	3145	11	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	-5	970	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	100.554661751706	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGGTACTTGTTC	1186	False	NA	-6	True	CATAAA	-17	NA	47930367	47840254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930251
transcript_44835.known	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	84.9329147033116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-15	True	NA	NA	False	AATAAA	-19	NA	47931141	47831550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_44836.nic	chr18	-	2175	11	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	100.554661751706	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTAATGTGTTC	1186	False	NA	3	True	AATAAA	-36	NA	47930367	47841224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930251
transcript_44846.known	chr18	-	10445	10	FSM	ENSG00000175387.16	ENST00000356825.8	10445	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	123.889835571869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGGACTAATTTTTAA	407	False	NA	-18	True	ATTAAA	-30	NA	47931146	47833095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520_47896810_47930799
transcript_44848.known	chr18	+	5765	12	FSM	ENSG00000134030.14	ENST00000256413.8	5765	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	12.2420491991758	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGAGTCTGTGCTCTT	-17	True	NA	NA	False	AATAAA	-21	NA	48539030	48863217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_48539313_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758406_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_4485.known	chr1	-	2816	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	0	0	0	multi-exon	TRUE	canonical	3	363	junction_1	230.610997350008	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-8	True	NA	-3	True	AATAAA	-22	NA	71081035	71063290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_44850.known	chr18	-	5049	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_14	12.2365998136737	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	-13	True	AATAAA	-20	NA	49460802	49041473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_44860.known	chr18	-	856	8	FSM	ENSG00000265681.8	ENST00000618613.5	856	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	5734.99141504259	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	130	False	NA	-29	True	AATAAA	-21	NA	49492409	49488480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492257
transcript_44861.known	chr18	-	758	8	FSM	ENSG00000265681.8	ENST00000583637.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	5730.14217866844	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	140	False	NA	-100	True	AAGAAA	-40	NA	49492399	49488551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492274
transcript_44866.known	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	5676.97325938348	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	57	False	49492512	-1	True	ATTAAA	-39	NA	49492482	49488452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
transcript_44872.known	chr18	-	790	7	FSM	ENSG00000265681.8	ENST00000579248.5	790	7	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_6	4462.93919096174	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	7	True	NA	-32	True	AATAAA	-18	NA	49492444	49488483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492257
transcript_44873.known	chr18	-	684	7	FSM	ENSG00000265681.8	ENST00000578532.5	684	7	0	0	0	0	multi-exon	FALSE	canonical	3	1548	junction_6	4354.61053558945	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAGAAACTGAAGAAACA	19	True	NA	-109	True	AAGAAA	-31	NA	49492432	49488560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492274
transcript_44876.nic	chr18	-	965	7	NIC	ENSG00000265681.8	novel	747	8	NA	NA	-62	0	intron_retention	FALSE	canonical	3	402	junction_6	4755.55642555807	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	NA	False	NA	-32	True	AATAAA	-18	NA	49492570	49488483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_44892.known	chr18	-	5548	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	116.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	5	True	NA	-1	True	AATAAA	-30	NA	49487234	49477242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49482411_49483583_49483772_49487042
transcript_44893.known	chr18	-	5395	3	FSM	ENSG00000177576.12	ENST00000613385.4	5395	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	155.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTATCTTGAGTTTT	-13	True	NA	-8	True	AATAAA	-23	NA	49487252	49477249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49482411_49483583_49483772_49487206
transcript_44896.known	chr18	-	1440	7	FSM	ENSG00000215472.10	ENST00000584895.5	1440	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6158.54256072183	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATTCAGTTTAACTG	953	False	NA	24	True	TATAAA	-42	NA	49491586	49481680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49482411_49483583_49483772_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_44897.known	chr18	-	614	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	3	7848	junction_6	2323.29139727815	19032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-14	True	NA	-29	True	AATAAA	-21	NA	49492465	49488480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
transcript_44898.known	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	9021	junction_1	1717.09226310062	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	699	False	NA	-32	True	AATAAA	-18	NA	49491840	49488483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_44899.known	chr18	-	584	6	FSM	ENSG00000265681.8	ENST00000581373.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4874.62612309908	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-28	True	NA	-32	True	AATAAA	-18	NA	49492479	49488483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491531_49491585_49492457
transcript_449.known	chr1	-	1645	4	FSM	ENSG00000198912.12	ENST00000361605.4	1645	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	2.94392028877595	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGCAGTCGTATGT	-12	True	NA	-10	True	AATAAA	-17	NA	3900272	3889132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_3890074_3890568_3891058_3892882_3892997_3900171
transcript_44900.known	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	5131.13864166619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	725	False	NA	-66	True	AGTAAA	-1	NA	49491814	49488517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
transcript_44901.known	chr18	-	795	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_5	5162.76122244676	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	56	False	49492512	NA	False	AAAAAG	-1	NA	49492483	49489358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_44902.known	chr18	+	10418	10	FSM	ENSG00000101670.12	ENST00000261292.9	10418	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.94405318873308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTACCATATTACAT	-2	True	NA	NA	False	AATAAA	-21	NA	49562056	49599185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414_49581658_49582361_49582483_49583555_49583775_49586745_49586851_49590500
transcript_44903.known	chr18	+	1453	6	FSM	ENSG00000101670.12	ENST00000580036.5	1453	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.72763633939717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGGCTATCAGTCCA	28	False	NA	NA	False	AATAAA	-18	NA	49562086	49581852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414
transcript_44904.known	chr18	-	1693	9	FSM	ENSG00000167306.20	ENST00000592688.1	1693	9	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_7	2.57087047515039	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGCTCAGAATAAAAACAC	-4	True	NA	-34	True	NA	NA	NA	49849846	49826289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566
transcript_44911.known	chr18	-	2926	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_9	132.472032920813	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTACATATTCT	-7	True	NA	-13	True	AATAAA	-19	NA	49813533	49782163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
transcript_44912.nic	chr18	-	1794	10	NIC	ENSG00000167315.18	novel	1657	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	313.265240828138	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	-7	True	NA	-28	True	AATAAA	-18	NA	49813953	49783502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813681
transcript_44913.nic	chr18	-	1745	10	NIC	ENSG00000167315.18	novel	1840	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	326.187403530888	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	-8	True	NA	-28	True	AATAAA	-18	NA	49813954	49783502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_44915.known	chr18	-	1657	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	285.04831732511	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-7	True	NA	-30	True	AATAAA	-16	NA	49813953	49783504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
transcript_44926.known	chr18	+	421	1	FSM	ENSG00000267322.3	ENST00000615535.1	421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCAGGAGGCGGCCGC	-7	True	NA	16	True	NA	NA	NA	49814022	49814443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_49814000_49814400
transcript_44927.known	chr18	-	1840	10	FSM	ENSG00000167315.18	ENST00000589432.5	1840	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	326.187403530888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	1270	False	NA	-28	True	AATAAA	-18	NA	49813042	49783502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49812724
transcript_44935.known	chr18	-	2473	17	FSM	ENSG00000141644.18	ENST00000457839.6	2473	17	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	34.4514490805539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTATTTGGTGTGTTC	6846	False	NA	-28	True	AATAAA	-11	NA	50281466	50271049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_4494.known	chr1	-	1257	10	FSM	ENSG00000132485.14	ENST00000611683.1	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	190.010590997865	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGGCCAACCCCTACG	NA	False	NA	NA	False	ACTAAA	-10	NA	71081289	71065718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_44941.known	chr18	-	4905	16	FSM	ENSG00000141644.18	ENST00000591416.5	4905	16	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	47.9773094516796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	6	True	NA	-5	True	TTTAAA	-31	NA	50281769	50268845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_44942.nic	chr18	-	2634	16	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_5	42.0963973122008	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGTTCCTCTGTGG	-12	True	NA	-20	True	AATAAA	-19	NA	50281787	50271041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_44943.nic	chr18	-	2512	16	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	-13	-114	combination_of_known_junctions	FALSE	canonical	3	77	junction_5	42.0963973122008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCATGTTCATGAGTAA	-12	True	NA	NA	False	ATTAAA	-22	NA	50281787	50271163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_44945.known	chr18	-	1845	15	FSM	ENSG00000141644.18	ENST00000398493.5	1845	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	54.7966556405385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTGCAGACTGGCT	11	True	NA	NA	False	NA	NA	NA	50281500	50271468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_44952.known	chr18	-	1012	7	FSM	ENSG00000141644.18	ENST00000586118.5	1012	7	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	26.5920831994955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTGGTCTCAGGCGCCA	-10	True	NA	NA	False	NA	NA	NA	50281521	50275650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50275729_50275834_50275982_50276377_50276419_50276661_50276999_50277089_50277205_50279882_50280018_50281362
transcript_44954.known	chr18	-	2242	15	FSM	ENSG00000154832.16	ENST00000589940.5	2242	15	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	78.52703291198	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	661	False	NA	28	True	AATAAA	-17	NA	50287651	50282346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_44955.known	chr18	-	2280	15	FSM	ENSG00000154832.16	ENST00000412036.6	2280	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	80.2135224489828	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTCCACATTGCTGCG	676	False	NA	32	True	AATAAA	-21	NA	50287636	50282342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284719_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_44957.known	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_9	30.6980854285669	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-7	True	NA	28	True	AATAAA	-17	NA	50287692	50282346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_44978.nnic	chr18	+	2591	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	83.1620007416064	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50374987	50394168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392849_50393209
transcript_44979.nnic	chr18	+	2003	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	78.2064249148315	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-29	True	NA	14	True	AATAAA	-14	NA	50375063	50394168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392425_50393252
transcript_4498.nic	chr1	-	3683	7	NIC	ENSG00000132485.14	novel	1257	10	NA	NA	-13	-2161	intron_retention	FALSE	canonical	3	1028	junction_6	56.1337688027448	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAGTAGAGAGCAAAT	237	False	NA	NA	False	NA	NA	NA	71081048	71067879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_44982.nnic	chr18	+	2533	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	78.2064249148315	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-14	True	NA	14	True	AATAAA	-14	NA	50375000	50394168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392849_50393209
transcript_44983.known	chr18	+	979	7	FSM	ENSG00000154839.10	ENST00000398452.6	979	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	49.0082192652983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTGTGAACTTTTGAA	-10	True	NA	NA	False	NA	NA	NA	50375039	50392247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_44984.known	chr18	+	2849	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	29.4207976325139	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-4	True	NA	14	True	AATAAA	-14	NA	50375045	50394168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_44988.known	chr18	+	746	6	FSM	ENSG00000154839.10	ENST00000494518.1	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	84.6819933634064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACGTGTTACTGAATAT	11	False	NA	NA	False	CATAAA	-32	NA	50375060	50392160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50375240_50375819_50375919_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_4499.nic	chr1	-	2773	7	NIC	ENSG00000132485.14	novel	1257	10	NA	NA	-21	-3079	intron_retention	FALSE	canonical	3	1028	junction_6	56.1337688027448	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGTAGTTCAAATAAA	229	False	NA	NA	False	NA	NA	NA	71081056	71068797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_44990.known	chr18	+	1095	6	FSM	ENSG00000154839.10	ENST00000417656.6	1095	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	77.5721599544579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGATGGGGTTTCACCA	-7	True	NA	NA	False	NA	NA	NA	50375042	50392549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50391123_50391294_50392098
transcript_44992.known	chr18	+	9031	16	FSM	ENSG00000082212.13	ENST00000321341.11	9031	16	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_13	34.5191734161369	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATGATCTTGTTTTT	-20	True	NA	7	True	AGTAAA	-19	NA	50879117	50954257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
transcript_44997.known	chr18	+	2211	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	14.522013940528	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTAAAACATGCTCC	7	True	NA	NA	False	AATAAA	-18	NA	50968039	50988121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
transcript_44998.known	chr18	+	694	4	FSM	ENSG00000141642.9	ENST00000588577.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.0151463012778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTGCCTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	50967990	50986946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50968115_50974396_50974562_50984486_50984564_50986618
transcript_45.known	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4956	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00130_+_0_1100
transcript_45000.known	chr18	+	1505	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTAGTTGAGTAGTGAG	12	True	NA	NA	False	AATAAA	-17	NA	50968044	50969866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_50968115_50968431
transcript_45003.known	chr18	-	4142	2	FSM	ENSG00000176624.12	ENST00000406189.4	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCCTTGGTGTTTT	0	True	NA	-3	True	AATAAA	-23	NA	51197681	51174549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_51177577_51196566
transcript_45004.known	chr18	-	1237	3	FSM	ENSG00000134046.12	ENST00000398398.6	1237	3	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAAATACCTTTCATT	-14	True	NA	-13	True	AATAAA	-35	NA	54224647	54202679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_54203127_54204997_54205158_54224017
transcript_45005.known	chr18	-	1182	3	FSM	ENSG00000134046.12	ENST00000583046.1	1182	3	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	177.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGAAATACCTTTCAT	16	True	NA	-14	True	AATAAA	-34	NA	54224617	54202680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_54203103_54204997_54205158_54224017
transcript_45006.known	chr18	+	6020	10	FSM	ENSG00000101751.11	ENST00000579534.6	6020	10	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	43.9514322299254	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGTCCAGAGTTTTC	-38	True	NA	7	True	AATAAA	-14	NA	54269516	54298234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_45007.nic	chr18	+	1567	10	NIC	ENSG00000101751.11	novel	6020	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	161.443106211476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGGCTTTTTCATTC	-56	True	NA	13	True	AATAAA	-26	NA	54269498	54321266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54320272_54320393_54321065
transcript_45010.nic	chr18	+	2840	10	NIC	ENSG00000101751.11	novel	2705	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	114.464399554762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	3	True	NA	11	True	AATAAA	-18	NA	54269557	54294724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_45017.known	chr18	+	1204	6	FSM	ENSG00000101751.11	ENST00000583136.5	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	146.189466104778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAATTTTAGAAAAAGAA	30	True	NA	NA	False	NA	NA	NA	54269584	54282911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836
transcript_45018.known	chr18	+	2096	8	FSM	ENSG00000166845.15	ENST00000648616.1	2096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	61.842459491181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAGAGAACCTCCTCAT	556	False	NA	70	True	NA	NA	NA	54358481	54378845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54358871_54360526_54360856_54361642_54361892_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_45019.known	chr18	+	5237	8	FSM	ENSG00000166845.15	ENST00000300091.5	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	48.8755186829829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGGTTCTGGAAATC	659	False	NA	24	True	TATAAA	-38	NA	54358584	54382032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54358871_54360526_54360856_54361642_54361949_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_45020.known	chr18	+	4056	8	FSM	ENSG00000166845.15	ENST00000382911.8	4056	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	33.4053643498606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATGTTAAATAGAAAA	659	False	NA	NA	False	NA	NA	NA	54358584	54380368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_54358871_54360526_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_45025.known	chr18	-	3789	20	FSM	ENSG00000196628.20	ENST00000629387.2	3789	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	41.2653060665318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACAAGTAAAGTT	1	True	NA	NA	False	AATACA	-29	NA	55589807	55226792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_45026.known	chr18	-	8317	20	FSM	ENSG00000196628.20	ENST00000356073.8	8317	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	29.5888726558068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTTTTAGTATTATA	1217	False	NA	-3	True	TATAAA	-14	NA	55588629	55222333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_45028.nic	chr18	-	2772	20	NIC	ENSG00000196628.20	novel	3789	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_19	42.8243853177058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAGTGCAACTT	-4	True	NA	NA	False	AAAACA	-16	NA	55589850	55227840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_4503.nic	chr1	-	925	3	ISM	ENSG00000162620.16	ENST00000370911.7	1591	4	-21	2452	8	-2136	5prime_fragment	FALSE	canonical	2	5	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCAACTACATTAAACAA	-6	True	NA	NA	False	GATAAA	-8	NA	74198168	74182358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_74182862_74183435_74183685_74197995
transcript_45030.known	chr18	-	2767	19	FSM	ENSG00000196628.20	ENST00000537578.5	2767	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	44.8521920958438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTGAACGGCAATCTT	10	False	NA	NA	False	NA	NA	NA	55589836	55227751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_45031.nic	chr18	-	2276	19	NIC	ENSG00000196628.20	novel	2572	19	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	46.7136337726676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAGTGCAACTT	-12	True	NA	NA	False	AAAACA	-16	NA	55586122	55227840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55585972
transcript_45032.known	chr18	-	2628	19	FSM	ENSG00000196628.20	ENST00000568740.5	2628	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	56.1646609159396	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAAGTGC	2	True	NA	NA	False	AAAACA	-11	NA	55589806	55227845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351001_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_45035.known	chr18	-	2789	2	FSM	ENSG00000267325.2	ENST00000656675.1	2789	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGAAAGTCCTTAACAG	NA	False	NA	NA	False	AATAAA	-7	NA	55781722	55778009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_55780031_55780954
transcript_45036.known	chr18	+	518	3	FSM	ENSG00000267327.2	ENST00000589440.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCAATTTCTCTGCATC	NA	False	NA	NA	False	NA	NA	NA	55893037	56023462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_55893443_56017727_56017780_56023401
transcript_45038.nnic	chr18	+	804	3	Fusion	ENSG00000267327.2_ENSG00000267057.6	novel	620	4	NA	NA	-61	0	multi-exon	TRUE	canonical	0	0	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGCACAACTTATTTA	NA	False	NA	9	True	AATAAA	-24	NA	55892976	56096314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr18_+_55893443_56050079_56050178_56096074
transcript_45042.known	chr18	-	1339	10	FSM	ENSG00000091164.13	ENST00000590954.5	1339	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	355.314258399831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTTTCTAAATCAG	5	True	NA	-13	True	AATAAA	-25	NA	56651128	56602821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342_56638506_56647448_56647536_56651016
transcript_45043.known	chr18	-	2035	10	FSM	ENSG00000091164.13	ENST00000587807.5	2035	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	398.963100493712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTCTTTCTAAATC	NA	False	NA	-15	True	AATAAA	-23	NA	56651274	56602823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626161_56626267_56626360_56626458_56638342_56639040_56651016
transcript_45047.known	chr18	-	6840	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_1	56.4338153078815	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTGTATTTTGT	14	True	NA	NA	False	ATTAAA	-16	NA	56638592	56597208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
transcript_4505.known	chr1	+	4692	4	FSM	ENSG00000254685.8	ENST00000370898.9	4692	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	4.08248290463863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATACTCTGAAATTGTCA	-23	True	NA	NA	False	AATAAA	-16	NA	74198241	74208702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390
transcript_45051.nnic	chr18	-	2739	5	NNC	ENSG00000258609.3	novel	2604	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.49749974995	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	NA	False	NA	-1	True	AATAAA	-15	NA	57072156	57054557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_-_57056251_57056588_57056687_57057499_57058001_57069809_57070004_57071903
transcript_45053.known	chr18	+	10087	4	FSM	ENSG00000177511.6	ENST00000324000.4	10087	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTGGTTGTCTGTCAC	-17	True	NA	13	True	AATAAA	-24	NA	57352556	57368931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_57353026_57354401_57354525_57356912_57357471_57359994
transcript_45054.known	chr18	-	7689	11	FSM	ENSG00000066926.13	ENST00000262093.11	7689	11	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	18.2493835512326	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATATGCATAGACTGTT	-9	True	NA	NA	False	AGTAAA	-29	NA	57586702	57544376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580072_57580200_57586553
transcript_45058.known	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_13	132.476636323533	779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-39	True	NA	-26	True	AATAAA	-20	NA	57621836	57600655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
transcript_4507.known	chr1	+	601	4	FSM	ENSG00000254685.8	ENST00000467578.7	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	29.9777695412228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACAAACCTGGCTTTAC	-27	True	NA	NA	False	NA	NA	NA	74198237	74204593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74198361_74199663_74199846_74201317_74201411_74204390
transcript_45078.known	chr18	+	1954	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTAAGGCTAAAACTCA	5	True	NA	NA	False	AATAAA	-44	NA	57630349	57669296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_57630519_57641558_57642053_57668005
transcript_45083.known	chr18	+	4978	29	FSM	ENSG00000049759.20	ENST00000456173.6	4978	29	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	46.1201292987196	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	86	True	NA	NA	NA	58195389	58398157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_4509.known	chr1	+	524	4	FSM	ENSG00000254685.8	ENST00000472069.1	524	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	29.5334085777823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTTTATTAGGTTTG	35	False	NA	NA	False	NA	NA	NA	74198350	74204577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74198427_74199663_74199832_74201317_74201411_74204390
transcript_45091.known	chr18	+	727	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	347.506201383515	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-29	True	NA	15	True	AATAAA	-16	NA	59139874	59158832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
transcript_45092.known	chr18	+	791	6	FSM	ENSG00000166562.9	ENST00000587834.6	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_5	65.9302661908778	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-20	True	NA	15	True	AATAAA	-16	NA	59139883	59158832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
transcript_45094.known	chr18	+	718	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	356.436880807809	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-5	True	NA	15	True	AATAAA	-16	NA	59139898	59158832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
transcript_45095.known	chr18	+	2054	4	FSM	ENSG00000166562.9	ENST00000509791.7	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_3	69.5045961709648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTATTCTTTTTGTAC	-38	True	NA	NA	False	AATAAA	-17	NA	59139865	59157311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687
transcript_45096.known	chr18	+	824	3	FSM	ENSG00000134443.10	ENST00000529320.2	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGGCTGTTCTCTTAT	13	False	NA	20	True	AATAAA	-21	NA	59220171	59230770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59220405_59225491_59225716_59230403
transcript_45098.known	chr18	-	4824	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	0	0	0	multi-exon	TRUE	canonical	3	535	junction_5	49.6914787016401	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTCCTTCATTGA	-5	True	NA	-19	True	AATAAA	-17	NA	59359265	59327822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_45103.nic	chr18	-	1291	10	ISM	ENSG00000074695.6	ENST00000251047.6	4824	13	-59	10743	-59	-7103	5prime_fragment	FALSE	canonical	3	535	junction_2	44.2160799754463	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGAAGTAAGTATGGA	92	False	NA	NA	False	AGTAAA	-1	NA	59359324	59338565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_45105.nic	chr18	-	931	8	ISM	ENSG00000074695.6	ENST00000251047.6	4824	13	-59	18200	-59	-52	5prime_fragment	FALSE	canonical	3	574	junction_1	32.5093393174507	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGAAAAGTATCAGG	92	False	NA	NA	False	GATAAA	-15	NA	59359324	59346022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_45108.known	chr18	-	6271	11	FSM	ENSG00000183287.14	ENST00000439986.9	6271	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	6.5916613990708	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTCTACTGTGTTTTG	-27	True	NA	-1	True	NA	NA	NA	59697423	59430938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_59436142_59438110_59438147_59439542_59439579_59439676_59439817_59447982_59448104_59454850_59454952_59466738_59466892_59469472_59469608_59480185_59480239_59696628_59696710_59697211
transcript_45110.known	chr18	+	1081	2	FSM	ENSG00000267774.2	ENST00000588946.2	1081	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGAGTTCGGAACAAGTAA	NA	False	NA	NA	False	AATAAA	-23	NA	59696458	59698111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59696670_59697241
transcript_45112.known	chr18	+	1899	2	FSM	ENSG00000141682.12	ENST00000316660.7	1899	2	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	0	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTGTTAATTTT	0	True	NA	29	True	ATTAAA	-14	NA	59899995	59904305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_59900236_59902646
transcript_45114.known	chr18	-	664	1	FSM	ENSG00000267742.1	ENST00000591086.1	664	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGGTTTTTATGTAG	NA	False	NA	NA	False	NA	NA	NA	60017441	60016777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_60016800_60017400
transcript_45117.known	chr18	-	653	2	FSM	ENSG00000267279.3	ENST00000586949.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAACTGCTTATTTCC	15	True	NA	2	True	AATAAA	-18	NA	61606916	61606067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_61606655_61606850
transcript_45118.known	chr18	-	7936	31	FSM	ENSG00000197563.11	ENST00000640252.2	7936	31	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_29	44.4104717380935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTTATGATTTGA	-36	True	NA	NA	False	AATAAA	-18	NA	62187056	62041163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
transcript_45120.known	chr18	-	4456	30	FSM	ENSG00000197563.11	ENST00000400334.7	4456	30	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_28	37.8268160736365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTTTATGGTATACCAG	-18	True	NA	66	True	NA	NA	NA	62187038	62044548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_45123.known	chr18	-	6045	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_28	22.6194110246496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCCTCCTGGGCTCA	-36	True	NA	NA	False	NA	NA	NA	62187056	62042851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_45129.known	chr18	-	2367	15	FSM	ENSG00000197563.11	ENST00000638329.1	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	50.3629682547462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTAAAAAAATCTCT	-29	True	NA	NA	False	NA	NA	NA	62187049	62112564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_4513.known	chr1	-	2301	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	128.472603603038	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGCTTTTCTAGTTT	NA	False	NA	-27	True	AATAAA	-15	NA	74733408	74705489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
transcript_45131.nic	chr18	-	2073	14	ISM	ENSG00000197563.11	ENST00000638183.1	4046	29	-13	60924	0	99	5prime_fragment	FALSE	canonical	3	117	junction_13	26.4993022125391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTCTTAAATGATGT	-8	True	NA	NA	False	AATAAA	-16	NA	62187028	62112711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_45134.known	chr18	-	1853	5	FSM	ENSG00000197563.11	ENST00000589720.6	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	38.2058568808501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGGCCTGATTTTCAT	5	True	NA	NA	False	NA	NA	NA	62187015	62153444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_45135.nic	chr18	+	1391	2	ISM	ENSG00000134444.15	ENST00000587725.5	3268	22	-29	63798	4	-15677	5prime_fragment	FALSE	canonical	3	131	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAGCAAATAAATAAA	-21	True	NA	NA	False	ATTAAA	-7	NA	62187261	62211773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_62188032_62211152
transcript_45136.known	chr18	-	5143	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	10.9081462366888	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTATCTAGAAGTTTG	-7	True	NA	-3	True	AATAAA	-29	NA	63367206	63327725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_45137.known	chr18	+	785	2	FSM	ENSG00000267390.2	ENST00000589905.2	820	2	33	2	33	-2	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGTGGTTTATTAT	2	True	NA	5	True	AATAAA	-21	NA	63367327	63381629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_63367860_63381376
transcript_45138.known	chr18	-	3337	11	FSM	ENSG00000119541.10	ENST00000238497.10	3337	11	0	0	0	0	multi-exon	TRUE	canonical	3	310	junction_5	38.2653890611346	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTTCAATGACTTT	-10	True	NA	1	True	ATTAAA	-23	NA	63422476	63389189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63391077_63393408_63393550_63397033_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_4514.known	chr1	-	1908	9	FSM	ENSG00000116791.14	ENST00000340866.10	1908	9	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	29.8137447329248	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTTCTAGTTTTTAT	-19	True	NA	-23	True	AATAAA	-19	NA	74733050	74705485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_45144.nic	chr18	-	441	3	ISM	ENSG00000119541.10	ENST00000591519.1	551	4	-77	2977	-4	-2977	5prime_fragment	FALSE	canonical	3	404	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAGAAAAAAGCACAGA	-1	True	NA	NA	False	ACTAAA	-16	NA	63422467	63410352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_63410447_63411466_63411579_63422232
transcript_45145.known	chr18	+	2586	7	FSM	ENSG00000206075.14	ENST00000382771.9	2586	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTTTTTTTTTTCCT	3	True	NA	NA	False	AATAAA	-17	NA	63476957	63505085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_63477046_63484421_63484597_63486945_63487084_63489346_63489465_63492952_63493096_63499119_63499288_63503329
transcript_45146.known	chr18	-	1707	8	FSM	ENSG00000206073.11	ENST00000341074.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2.35606035749581	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTTACCTGTTTTC	1	True	NA	NA	False	AATAAA	-18	NA	63644256	63637258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_63638124_63639184_63639341_63639633_63639777_63640873_63640992_63641759_63641889_63643160_63643218_63643412_63643604_63644208
transcript_45147.nnic	chr18	+	792	5	NNC	ENSG00000221887.6	novel	2102	4	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	6.49519052838329	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	NA	False	NA	8	True	AATAAA	-16	NA	63949250	63961835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157_63960276_63961635
transcript_45148.known	chr18	+	2102	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.09120616516523	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	5	True	NA	8	True	AATAAA	-16	NA	63949300	63961835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
transcript_45151.known	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_7	19.0550080906132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-13	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_45154.known	chr18	-	1509	15	FSM	ENSG00000166479.10	ENST00000564631.5	1509	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	39.3200499304186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTTATTCGTATTTTG	18	True	NA	NA	False	NA	NA	NA	68715077	68676838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_45158.known	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	16.6990162242314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	37	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_45159.nic	chr18	-	3173	4	ISM	ENSG00000166479.10	ENST00000544714.3	505	5	29	915	2	-915	5prime_fragment	FALSE	canonical	3	153	junction_1	13.1402688962847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCTTTGTAGAAAAGTTG	32	True	NA	NA	False	NA	NA	NA	68715063	68707194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_-_68710145_68711363_68711404_68713845_68713901_68714935
transcript_45160.nic	chr18	+	718	2	ISM	ENSG00000150636.17	ENST00000580292.2	1859	4	-104	37913	0	-1038	5prime_fragment	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCAGATGTGGTGGC	-32	True	NA	NA	False	NA	NA	NA	68715208	68717092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr18_+_68715362_68716527
transcript_45162.known	chr18	+	3084	6	FSM	ENSG00000075336.12	ENST00000169551.11	3084	6	0	0	0	0	multi-exon	TRUE	canonical	3	344	junction_2	23.3015020975044	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTGTGGTGTCTCTG	-2	True	NA	NA	False	ACTAAA	-39	NA	74148522	74160531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74149110_74155144_74155208_74155305_74155404_74158013_74158088_74158170_74158277_74158375
transcript_45165.nnic	chr18	+	1375	6	NNC	ENSG00000075336.12	novel	3084	6	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	149.048448499137	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTATTCATTTTATAT	584	False	NA	10	True	AATAAA	-15	NA	74148503	74158786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_74149110_74155144_74155225_74155305_74155404_74158013_74158088_74158170_74158277_74158375
transcript_45176.known	chr18	-	776	6	FSM	ENSG00000166347.19	ENST00000494131.6	776	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	889.985932473092	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	26	True	NA	-16	True	AATATA	-16	NA	74291935	74253296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74253666_74255740_74255776_74256829_74256854_74260914_74260945_74263348_74263478_74291746
transcript_45178.known	chr18	-	718	5	FSM	ENSG00000166347.19	ENST00000299438.13	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	770.316290558625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	982	False	NA	-15	True	AATATA	-17	NA	74291041	74253295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74290887
transcript_45179.known	chr18	-	3231	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	0	0	0	multi-exon	FALSE	canonical	3	1744	junction_2	49.1655367101794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTTGCCCTGAATT	-2	True	NA	0	True	AATAAA	-18	NA	74291963	74250845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
transcript_45181.known	chr18	-	5913	4	FSM	ENSG00000166347.19	ENST00000583418.1	5913	4	0	0	0	0	multi-exon	FALSE	canonical	3	1753	junction_3	44.1688678696759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	4	True	NA	-16	True	AATATA	-16	NA	74291957	74253296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74253666_74255740_74260945_74263348_74263478_74291746
transcript_45187.known	chr18	+	2653	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	0	0	0	0	multi-exon	TRUE	canonical	1	502	junction_1	463.241436077531	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTCAGTTGCTCGTC	-50	True	NA	23	True	AATAAA	-30	NA	74496306	74521131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_45191.known	chr18	+	4975	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	0	0	0	0	multi-exon	FALSE	canonical	1	696	junction_9	333.339327769792	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	6	True	NA	13	True	AATAAA	-24	NA	74496362	74523454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_452.known	chr1	+	4001	15	FSM	ENSG00000069424.16	ENST00000352527.6	4001	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.50724750398562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGGTCTCTGTGACTTTT	176	False	NA	12	True	AATAAA	-14	NA	6026162	6101178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_4520.known	chr1	-	1292	8	FSM	ENSG00000116791.14	ENST00000370871.7	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	115.046219638288	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACTGCTCAGTTTCC	9	True	NA	NA	False	ATTAAA	-15	NA	74733022	74705971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_45214.known	chr18	+	2349	9	FSM	ENSG00000133313.15	ENST00000324301.12	2349	9	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_2	639.733538279806	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCCATCTCAGTTGCTC	74	False	NA	20	True	AATAAA	-27	NA	74499860	74521128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74500034_74501328_74501473_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_45215.known	chr18	+	536	4	FSM	ENSG00000133313.15	ENST00000577355.2	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	806.392102033634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	171	False	NA	18	True	AATAAA	-19	NA	74501385	74509335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74501473_74505848_74506012_74508839_74508929_74509138
transcript_45216.known	chr18	+	4342	12	FSM	ENSG00000150656.15	ENST00000358821.8	4342	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.88139633771206	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGTGATTGTGTGCCAG	0	True	NA	NA	False	AATAAA	-18	NA	74534499	74587212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_74534692_74556337_74556467_74559322_74559473_74560855_74561019_74562046_74562136_74567232_74567434_74571185_74571271_74576868_74577030_74578162_74578328_74580129_74580272_74583560_74583709_74584495
transcript_45218.known	chr18	-	2418	2	FSM	ENSG00000264247.2	ENST00000652782.1	2418	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTTGTGTTAACTAG	-13	True	NA	NA	False	AATAAA	-21	NA	74597833	74592827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74593840_74596427
transcript_45219.known	chr18	-	756	2	FSM	ENSG00000264247.2	ENST00000585279.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGACAACAAAATATGC	20	True	NA	NA	False	NA	NA	NA	74597800	74593148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_74593840_74597735
transcript_45220.known	chr18	-	7518	2	FSM	ENSG00000180011.7	ENST00000322342.4	7518	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATGTGTAGAGCGT	11	True	NA	NA	False	AATAAA	-15	NA	75209139	75195112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_75202341_75208849
transcript_45221.known	chr18	+	631	3	FSM	ENSG00000265778.4	ENST00000657360.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGCGCAGAGTTTGC	-3	True	NA	NA	False	AAAACA	-22	NA	76491628	76493168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_76491690_76492175_76492334_76492756
transcript_45222.nnic	chr18	+	1546	2	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-60	-110372	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTTTTTGGACATCCA	NA	False	NA	NA	False	AATAAA	-22	NA	77421558	77450672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr18_+_77422025_77449592
transcript_45223.known	chr18	-	471	2	FSM	ENSG00000263146.3	ENST00000572007.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGCACGCTGCTTTCG	2151	False	NA	NA	False	NA	NA	NA	78977883	78977287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_78977430_78977554
transcript_45225.known	chr18	+	1650	5	FSM	ENSG00000166377.21	ENST00000586722.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	35.5694742721902	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAACCCCATCAAAAAG	-4	True	NA	NA	False	AAGAAA	-5	NA	79069407	79116082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79114993
transcript_45226.known	chr18	+	2531	8	FSM	ENSG00000131196.18	ENST00000592223.5	2531	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	5.16661180572146	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGATGTGGTCTTTAA	20	True	NA	19	True	AATAAA	-19	NA	79400332	79468001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
transcript_45227.known	chr18	-	2072	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTAAAGTTTTCCT	-10	True	NA	-8	True	ATTAAA	-14	NA	79679358	79677286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79677300_79679400
transcript_45228.known	chr18	+	3538	12	FSM	ENSG00000060069.18	ENST00000075430.11	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_10	64.1565749997806	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	27	True	NA	18	True	AATAAA	-15	NA	79679845	79754503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79736354_79736522_79753651
transcript_45231.known	chr18	-	3472	3	FSM	ENSG00000141759.15	ENST00000269601.10	3472	3	0	0	0	0	multi-exon	FALSE	canonical	3	1382	junction_2	48	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTAAGTTTATTGTAT	-1	True	NA	-18	True	GATAAA	-15	NA	79988563	79970812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79973857_79977597_79977702_79988239
transcript_45232.known	chr18	-	1185	3	FSM	ENSG00000141759.15	ENST00000585474.5	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAATAGGAGAGCTAT	-18	True	NA	-6	True	AATAAA	-22	NA	80033949	79972874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79973857_79977597_79977702_80033850
transcript_45235.known	chr18	-	752	2	FSM	ENSG00000141759.15	ENST00000588162.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCGTTTTGCATAC	21	True	NA	-1	True	AGTAAA	-21	NA	79988541	79973406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79973857_79988239
transcript_45237.known	chr18	-	546	4	FSM	ENSG00000141759.15	ENST00000592957.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	696.500299114556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	76	False	NA	-25	True	AATAAA	-20	NA	80033891	79973512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_-_79973857_79977597_79977702_80030520_80030578_80033850
transcript_45239.known	chr18	+	5590	7	FSM	ENSG00000101546.13	ENST00000306735.10	5590	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	21.1141079744221	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATACTTTCTTTTT	-1	True	NA	111	True	AATAAA	-22	NA	80034433	80050651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211_80044286_80045773
transcript_4524.known	chr1	-	1592	7	FSM	ENSG00000116791.14	ENST00000370872.7	1592	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	152.591411582988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTAGTTTTTATATTA	13	True	NA	-19	True	AATAAA	-23	NA	74733018	74705481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74723117_74723271_74732955
transcript_45241.known	chr18	+	5157	4	FSM	ENSG00000101544.9	ENST00000262198.9	5157	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	7.34846922834953	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTGTTTAATTCTTTT	-12	True	NA	76	True	ATTAAA	-21	NA	80109261	80140346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr18_+_80109473_80117529_80117651_80133102_80133193_80135611
transcript_45242.known	chr19	-	1183	3	FSM	ENSG00000282591.1	ENST00000631376.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	77686	76162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_76784_76885_77091_77329
transcript_45243.known	chr19	-	850	6	FSM	ENSG00000141934.10	ENST00000633125.1	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	333.025524547294	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGTCACTGACGTT	-2	True	NA	NA	False	NA	NA	NA	291398	281462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291288
transcript_45244.known	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	320.72318282282	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	3	True	NA	-5	True	AGTAAA	-22	NA	291393	281042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
transcript_45253.known	chr19	+	1418	5	FSM	ENSG00000099804.9	ENST00000215574.9	1418	5	0	0	0	0	multi-exon	FALSE	canonical	3	1642	junction_4	82.1416459538035	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGAAGCTGTGCTTG	1	True	NA	36	True	AATAAA	-15	NA	531759	542087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541338
transcript_45257.known	chr19	+	1795	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	2962.07784213331	2242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	8765	False	NA	24	True	AATAAA	-24	NA	571276	583493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_4526.known	chr1	+	3437	6	FSM	ENSG00000162623.16	ENST00000370867.8	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.3385574521497	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTAGTCTTAGTGTC	-13	True	NA	NA	False	AATAAA	-16	NA	74733151	74766677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_45264.known	chr19	+	1575	8	FSM	ENSG00000172270.22	ENST00000680326.1	1575	8	0	0	0	0	multi-exon	FALSE	canonical	1	455	junction_1	2845.88262554297	2988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	13	False	NA	24	True	AATAAA	-24	NA	572609	583493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_572702_579508_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_45267.known	chr19	+	1519	8	FSM	ENSG00000172270.22	ENST00000618112.4	1519	8	0	0	0	0	multi-exon	FALSE	canonical	2	130	junction_3	2975.78090591361	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	38	False	NA	-6	True	NA	NA	NA	572634	583463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_572702_579499_579657_580378_580462_580655_580783_581314_581592_582305_582331_582513_582583_582749
transcript_45283.known	chr19	-	509	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	40	493	-6	-101	multi-exon	FALSE	canonical	3	77	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGCTCTCGCTAGA	-5	True	NA	-8	True	NA	NA	NA	571734	567310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_567625_571439_571597_571696
transcript_45289.known	chr19	-	625	3	FSM	ENSG00000267751.6	ENST00000588908.6	1041	3	18	398	-8	-11	multi-exon	FALSE	canonical	3	10	junction_1	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGACGTCATGAATTAA	-7	True	NA	-18	True	NA	NA	NA	571736	567220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_567649_571439_571597_571696
transcript_45291.known	chr19	-	721	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	12	0	8	0	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTAATTGCGAGAATG	15	True	NA	-7	True	NA	NA	NA	571745	567209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_567625_571439
transcript_45297.known	chr19	-	469	4	FSM	ENSG00000099821.14	ENST00000592633.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_1	38.0555150040335	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	NA	False	NA	-32	True	AATAAA	-19	NA	617997	617223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_617324_617418_617481_617569_617656_617776
transcript_45298.known	chr19	+	2144	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	791	False	NA	8	True	AATAAA	-15	NA	680706	683392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_680880_681332_681561_681649
transcript_453.known	chr1	+	1552	6	FSM	ENSG00000069424.16	ENST00000666299.1	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	11.6344316577992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAAATCCCCTGATCAC	6	True	NA	3	True	ATTAAA	-15	NA	6026344	6086363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203
transcript_45304.known	chr19	+	1023	2	FSM	ENSG00000267530.4	ENST00000606242.3	1045	2	0	22	0	-22	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACCACTTGTTACCTC	-35	True	NA	NA	False	NA	NA	NA	782762	785269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_783331_784814
transcript_45305.known	chr19	+	603	1	FSM	ENSG00000267530.4	ENST00000666859.1	603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGCCCAGAAATCCA	-21	True	NA	NA	False	NA	NA	NA	782776	783379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_782800_783400
transcript_45307.known	chr19	+	2201	7	FSM	ENSG00000011304.22	ENST00000627714.2	2201	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	659.662203117794	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTGGCTTCCTCTTTC	NA	False	NA	40	True	AATAAA	-30	NA	797391	812327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_797506_799412_799444_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_45309.known	chr19	+	1217	4	FSM	ENSG00000011304.22	ENST00000585856.2	1217	4	0	0	0	0	multi-exon	FALSE	canonical	3	1760	junction_1	52.7825728815866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGACTGTGGCAGCG	340	False	NA	54	True	NA	NA	NA	807858	811021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_808453_808545_808763_810542_810621_810693
transcript_45310.known	chr19	+	1036	4	FSM	ENSG00000196415.10	ENST00000544537.2	1036	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCCTGTCTGTCCT	18	False	NA	NA	False	AATAAA	-13	NA	843340	848175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_843627_843892_844035_846146_846378_847798
transcript_45311.known	chr19	-	3420	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	0	0	0	0	multi-exon	TRUE	canonical	3	264	junction_5	52.3360413528746	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	-7	True	NA	NA	False	NA	NA	NA	893218	867629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_45314.known	chr19	-	1803	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	0	0	0	multi-exon	TRUE	canonical	3	588	junction_7	46.2839505836813	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-26	True	NA	-7	True	AATAAA	-17	NA	913219	896502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
transcript_45316.known	chr19	+	1521	10	FSM	ENSG00000065268.11	ENST00000585809.6	1521	10	0	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_5	60.4797690896369	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	9	True	NA	27	True	NA	NA	NA	984344	994557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
transcript_45317.known	chr19	+	1492	8	FSM	ENSG00000064666.15	ENST00000568865.3	1492	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	1638.84444107451	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTTCCCCCAGGGG	22	True	NA	NA	False	AAGAAA	-3	NA	1026630	1038309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1036878_1037001_1037624
transcript_4532.known	chr1	+	3335	5	FSM	ENSG00000162623.16	ENST00000457880.6	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	60.0765137137634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTAGTCTTAGT	-13	True	NA	NA	False	AATAAA	-13	NA	74733151	74766674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_74733419_74736541_74736623_74748750_74748823_74752291_74752426_74763893
transcript_45322.known	chr19	+	2109	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	1271.39342848703	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	9	True	NA	33	True	AATAAA	-23	NA	1026617	1039068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
transcript_45326.known	chr19	+	2149	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	0	0	0	0	multi-exon	FALSE	canonical	3	3420	junction_6	186.293451307339	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGCCAAGAGAGTTG	-1	True	NA	30	True	AATAAA	-20	NA	1026607	1039065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
transcript_45328.known	chr19	+	2033	6	FSM	ENSG00000064666.15	ENST00000348419.7	2033	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	1412.34791747643	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	1	True	NA	33	True	AATAAA	-23	NA	1026609	1039068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415_1036563_1037624
transcript_45332.known	chr19	+	6815	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	26.1429471598054	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	-23	True	NA	25	True	AATAAA	-33	NA	1040106	1065572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
transcript_45336.known	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3537	junction_1	328.412632434955	2112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-19	True	NA	0	True	AATAAA	-22	NA	1095375	1086573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_45340.known	chr19	-	1286	8	FSM	ENSG00000099817.12	ENST00000215587.11	1286	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1414.70843610395	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCGACTAACAAGGTTT	-18	True	NA	NA	False	AATAAA	-19	NA	1095374	1088162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088721_1089471_1089574_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_45341.known	chr19	-	1749	8	FSM	ENSG00000099817.12	ENST00000612655.4	1749	8	0	0	0	0	multi-exon	FALSE	canonical	2	70	junction_1	1392.224603625	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAAAGGGACAAACACT	-24	True	NA	NA	False	NA	NA	NA	1095380	1087644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088682_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_45342.known	chr19	-	487	7	FSM	ENSG00000099817.12	ENST00000585838.2	487	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1761.38822302814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCACGGCTGCTGCTC	8493	False	NA	NA	False	NA	NA	NA	1095261	1088644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088714_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1095258
transcript_45345.known	chr19	-	1214	8	FSM	ENSG00000099817.12	ENST00000591767.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1680.88871051681	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	20	True	NA	NA	False	AATAAA	-34	NA	1095336	1088147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093755_1093904_1095258
transcript_45347.known	chr19	+	1002	8	NNC	ENSG00000167468.19	novel	536	6	NA	NA	-56	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1735.99694347516	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	-10	True	NA	21	True	AATAAA	-21	NA	1104649	1106787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_1104930_1105185_1105281_1105365_1105403_1105405_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_45355.known	chr19	+	803	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	1470.30971793927	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCGTAGGGGCTTG	9	True	NA	22	True	AATAAA	-22	NA	1104072	1106788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
transcript_45357.known	chr19	+	793	7	FSM	ENSG00000167468.19	ENST00000611653.4	793	7	0	0	0	0	multi-exon	FALSE	canonical	3	3622	junction_1	229.609572003337	3249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	-12	True	NA	13	True	AATAAA	-13	NA	1104051	1106779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_45367.known	chr19	+	812	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	1615.49665428313	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	14	False	NA	13	True	AATAAA	-13	NA	1104007	1106779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
transcript_45370.known	chr19	+	1144	4	FSM	ENSG00000099624.8	ENST00000590265.5	1144	4	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	349.48470003071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	-16	True	NA	22	True	ATTAAA	-16	NA	1241769	1244825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1242610_1244096_1244186_1244314_1244441_1244736
transcript_45371.known	chr19	+	1393	3	FSM	ENSG00000099624.8	ENST00000588538.5	1393	3	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_2	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	31	True	NA	22	True	ATTAAA	-16	NA	1241816	1244825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1242610_1244096_1244186_1244314
transcript_45395.known	chr19	+	938	8	FSM	ENSG00000099622.14	ENST00000586636.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_6	421.221304963438	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCGCACGAGTAGGACC	14	False	NA	88	True	AAGAAA	-17	NA	1269346	1274880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
transcript_45406.known	chr19	+	1303	7	FSM	ENSG00000099622.14	ENST00000586472.5	1303	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	435.605612911496	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	5513	False	NA	NA	False	ATTAAA	-18	NA	1266652	1273172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1266702_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_4541.known	chr1	+	2578	13	FSM	ENSG00000117054.15	ENST00000681430.1	2578	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	234.57491103886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	0	True	NA	-66	True	AAAAAG	-19	NA	75724430	75763596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75750769_75750892_75761121_75761371_75762691
transcript_45412.known	chr19	+	1328	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_6	96.3213660386705	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	4	True	NA	NA	False	ATTAAA	-18	NA	1269336	1273172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_45413.known	chr19	+	1073	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_6	370.582724308022	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	17	False	NA	18	True	AATAAA	-23	NA	1269349	1274810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_45418.known	chr19	+	870	7	FSM	ENSG00000099622.14	ENST00000585630.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	398.235971364829	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGACCGCTTCTGA	2561	False	NA	55	True	NA	NA	NA	1269265	1272582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_45419.known	chr19	+	942	7	FSM	ENSG00000099622.14	ENST00000586773.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	492.492103715605	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCGCCTGGAGCCCG	-6	True	NA	NA	False	NA	NA	NA	1269326	1274595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_45420.known	chr19	+	3346	6	FSM	ENSG00000099622.14	ENST00000587896.6	3346	6	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_2	11.1892805845595	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-1	True	NA	18	True	AATAAA	-23	NA	1269331	1274810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_45423.known	chr19	+	796	6	FSM	ENSG00000099622.14	ENST00000593128.5	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_5	101.775046057469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCATTTCGGTTCTGA	-2	True	NA	25	True	AGTAAA	-25	NA	1269330	1272552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271468_1271550_1271633_1271980_1272052_1272426
transcript_45424.known	chr19	+	650	6	FSM	ENSG00000099622.14	ENST00000593048.5	650	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	425.995492933904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCGGGATGGCCTCGTT	3	True	NA	73	True	NA	NA	NA	1269335	1272600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_45427.known	chr19	+	1835	6	FSM	ENSG00000099622.14	ENST00000589710.5	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	435.914945832326	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	2561	False	NA	NA	False	ATTAAA	-18	NA	1269265	1273172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_4543.known	chr1	+	2261	12	FSM	ENSG00000117054.15	ENST00000370841.9	2261	12	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	64.2159322163373	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGAATTTAATATTTCT	-14	True	NA	17	True	TATAAA	-25	NA	75724708	75763679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_45434.known	chr19	+	796	2	FSM	ENSG00000099622.14	ENST00000592467.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTGACCCTCCAGGGAC	26	True	NA	NA	False	NA	NA	NA	1261165	1264572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1261642_1264252
transcript_45435.known	chr19	+	769	2	FSM	ENSG00000099622.14	ENST00000589161.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGCAAGATGCAACAT	681	False	NA	NA	False	NA	NA	NA	1261820	1264698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1262144_1264252
transcript_45436.known	chr19	-	1356	2	FSM	ENSG00000267493.4	ENST00000585832.3	1356	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCCTAGTTATTAAG	5537	False	NA	-3	True	NA	NA	NA	1270260	1267470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1268391_1269824
transcript_45437.known	chr19	+	1052	9	FSM	ENSG00000099622.14	ENST00000585914.5	1052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	565.450484127479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGATTCGAATAAAGGGCC	19	False	NA	-19	True	NA	NA	NA	1269351	1274773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1273493_1273716_1274306_1274445_1274648
transcript_45438.known	chr19	+	1087	3	FSM	ENSG00000099622.14	ENST00000588917.2	1087	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	122	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	134	False	NA	18	True	AATAAA	-23	NA	1272924	1274810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1273716_1274306_1274441_1274648
transcript_45439.known	chr19	+	668	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	129	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	3	True	NA	40	True	AATAAA	-35	NA	1276020	1279244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1276104_1277182_1277300_1278776
transcript_45440.nnic	chr19	+	756	3	NNC	ENSG00000228300.14	novel	668	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	186	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	40	False	NA	24	True	AATAAA	-19	NA	1276090	1279228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_1276278_1277182_1277300_1278776
transcript_45441.known	chr19	+	751	3	FSM	ENSG00000228300.14	ENST00000590269.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	191.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	-8	True	NA	NA	False	NA	NA	NA	1276099	1278836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1276674_1277182_1277300_1278776
transcript_45443.known	chr19	+	1675	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	42	False	NA	40	True	AATAAA	-35	NA	1276092	1279244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1277300_1278776
transcript_45444.nic	chr19	+	1634	5	NIC	ENSG00000160953.17	novel	1513	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_4	139.343101730943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	-7	True	NA	NA	False	NA	NA	NA	1354976	1359894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1358587
transcript_45445.known	chr19	+	522	3	FSM	ENSG00000160953.17	ENST00000592374.6	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	1354710	1357094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1355021_1356323_1356450_1357008
transcript_45446.known	chr19	+	1513	4	FSM	ENSG00000160953.17	ENST00000590866.2	1513	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	142.663551367856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	-12	True	NA	NA	False	NA	NA	NA	1354971	1359894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1355021_1357008_1357095_1358393_1358465_1358587
transcript_45450.known	chr19	+	758	8	FSM	ENSG00000115286.21	ENST00000233627.14	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	154.017359212446	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	2	True	NA	28	True	AATAAA	-21	NA	1383906	1395584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_45451.known	chr19	+	1743	8	FSM	ENSG00000115286.21	ENST00000539480.5	1743	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	490.20782764631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	-5	True	NA	33	True	AATAAA	-26	NA	1383899	1395589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
transcript_45452.known	chr19	+	869	9	FSM	ENSG00000115286.21	ENST00000546172.7	869	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	595.807802483318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	13	True	NA	28	True	AATAAA	-21	NA	1383917	1395584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1383943_1386517_1386640_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_45453.known	chr19	+	2818	7	FSM	ENSG00000115286.21	ENST00000313408.11	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	166.295920976232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	-1	True	NA	25	True	AATAAA	-18	NA	1383903	1395581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
transcript_45454.known	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	41.581726755872	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-13	True	NA	50	True	NA	NA	NA	1401542	1397025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_45455.known	chr19	+	2086	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	253.84761486027	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	16	False	NA	30	True	AATAAA	-23	NA	1407679	1435683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
transcript_45458.known	chr19	+	711	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7788.01978602392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	8	True	NA	29	True	AATAAA	-17	NA	1438405	1440494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
transcript_4546.known	chr1	+	1332	12	FSM	ENSG00000117054.15	ENST00000420607.6	1332	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	188.515952807209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGCTCCAGAAAAAAGAA	57	False	NA	NA	False	NA	NA	NA	75724779	75762809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728388_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_45461.known	chr19	+	550	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7397.27739704879	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	2	True	NA	25	True	AATAAA	-13	NA	1438399	1440490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
transcript_45462.known	chr19	+	562	4	FSM	ENSG00000115268.10	ENST00000586686.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7400.50450232205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	-13	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1439967_1440254_1440348
transcript_45463.known	chr19	+	473	4	FSM	ENSG00000115268.10	ENST00000589656.6	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	7625.78303447514	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGTCCTTTGCGCAGC	7	True	NA	23	True	AATAAA	-11	NA	1438404	1440488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440018_1440242_1440348
transcript_45464.known	chr19	+	467	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	7371.46287305911	9961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	24	False	NA	29	True	AATAAA	-17	NA	1438421	1440494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
transcript_45466.known	chr19	+	629	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_1	8019.88263976198	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	21	False	NA	29	True	AATAAA	-17	NA	1438418	1440494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
transcript_45467.known	chr19	+	570	3	FSM	ENSG00000115268.10	ENST00000586096.3	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	13469	junction_1	2575.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	23	False	NA	29	True	AATAAA	-17	NA	1438420	1440494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440018
transcript_45468.known	chr19	+	873	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	17253	junction_2	683.5	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	3	True	NA	29	True	AATAAA	-17	NA	1438400	1440494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_45469.nnic	chr19	+	1951	4	FSM	ENSG00000115268.10_ENSG00000268798.1	ENST00000592588.7	501	4	9	-1459	0	16	multi-exon	FALSE	canonical	3	13469	junction_1	2178.68834138545	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGATTTGCTCGT	7	True	NA	NA	False	NA	NA	NA	1438404	1441954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1438429_1438806_1438893_1440018_1440254_1440348
transcript_45472.known	chr19	-	1287	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	174.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCGTCTGAATGGTGC	14	True	NA	-12	True	CATAAA	-14	NA	1479183	1474173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478773_1478906_1479113
transcript_45473.known	chr19	-	1265	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	187	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGAATGGTGCCTCTGT	16	True	NA	-6	True	CATAAA	-20	NA	1479181	1474167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478773_1478906_1479139
transcript_45474.known	chr19	-	2243	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	35	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACGGTGTCGTCCTTAC	-18	True	NA	-3	True	ATTAAA	-18	NA	1479215	1473200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478773_1478906_1479162
transcript_45475.known	chr19	-	1524	3	FSM	ENSG00000119559.17	ENST00000651077.1	1524	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	173.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCGTCTGAATGGT	-18	True	NA	-14	True	CATAAA	-12	NA	1479215	1474175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475515_1478773_1478906_1479162
transcript_45480.known	chr19	-	357	3	FSM	ENSG00000119559.17	ENST00000592605.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTAGCTGGGCATAGT	-22	True	NA	NA	False	AATGAA	-33	NA	1479219	1478412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1478581_1478773_1478906_1479162
transcript_45481.known	chr19	-	492	2	FSM	ENSG00000119559.17	ENST00000589421.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	415	False	NA	NA	False	AATGAA	-11	NA	1479134	1478434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1478906_1479113
transcript_45483.nic	chr19	-	1972	2	ISM	ENSG00000119559.17	ENST00000591027.2	574	3	-17	1098	-11	-1098	5prime_fragment	FALSE	canonical	3	358	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAAATGAGCCAT	319	False	NA	NA	False	NA	NA	NA	1479230	1477001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_1478906_1479162
transcript_45485.known	chr19	-	2314	1	FSM	ENSG00000119559.17	ENST00000592486.1	2314	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTCTGAATGGTGCCT	3064	False	NA	-10	True	CATAAA	-16	NA	1476485	1474171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1474200_1476500
transcript_45486.known	chr19	-	1410	3	FSM	ENSG00000119559.17	ENST00000427685.2	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	176.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-19	True	NA	7	True	CATAAA	-33	NA	1479216	1474154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1475259_1478653_1478906_1479162
transcript_45487.known	chr19	+	1360	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_4	32.4220218370169	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACGTGTGCGG	-4	True	NA	16	True	AATAAA	-17	NA	1491180	1497927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
transcript_45490.known	chr19	-	1299	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	4673	junction_1	32.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTACAAAGTCACACTC	-12	True	NA	-24	True	AATAAA	-24	NA	1605462	1597168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1598216_1599411_1599561_1605359
transcript_45491.known	chr19	-	504	3	FSM	ENSG00000127540.12	ENST00000589880.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	14	True	NA	-24	True	ATTAAA	-16	NA	1605436	1598048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1598327_1599411_1599561_1605359
transcript_45492.nic	chr19	-	680	3	ISM	ENSG00000071564.17	ENST00000587425.5	629	4	295	-181	289	0	3prime_fragment	FALSE	canonical	3	195	junction_1	529	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCAGTCCCCGGGTTCT	6637	False	NA	-8	True	AATAAA	-21	NA	1615509	1609290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_1609600_1611703_1611850_1615284
transcript_45493.known	chr19	-	1751	5	FSM	ENSG00000071564.17	ENST00000592628.5	1751	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	510.040684651725	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	3011	False	NA	-10	True	AATAAA	-19	NA	1619135	1609292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1610501_1611703_1611850_1615284_1615521_1615685_1615822_1619110
transcript_45494.known	chr19	-	2694	5	FSM	ENSG00000071564.17	ENST00000593064.5	2694	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	423.629186317468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	2937	False	NA	-10	True	AATAAA	-19	NA	1619209	1609292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110
transcript_45496.known	chr19	-	4735	19	FSM	ENSG00000071564.17	ENST00000262965.12	4735	19	0	0	0	0	multi-exon	TRUE	canonical	3	904	junction_18	138.374246515619	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCAGTCCCCGGGTTC	-16	True	NA	-9	True	AATAAA	-20	NA	1652615	1609291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
transcript_45500.nic	chr19	-	2507	8	NIC	ENSG00000130270.16	novel	5095	29	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	7.26748419541537	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTCTTTCCCT	NA	False	NA	-22	True	AATAAA	-28	NA	1790885	1782074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1790756
transcript_45501.known	chr19	-	1299	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGGCTCATTTTTCT	11	True	NA	1	True	TATAAA	-33	NA	1876169	1874870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_1874900_1876200
transcript_45505.known	chr19	+	2501	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	30.4617246174058	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	9	True	NA	33	True	AATAAA	-21	NA	1905398	1926013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_45506.known	chr19	+	2394	6	FSM	ENSG00000227500.10	ENST00000409472.5	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	110.97387079849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	14	True	NA	33	True	AATAAA	-21	NA	1905403	1926013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1923069_1923188_1924107
transcript_45507.known	chr19	+	1477	6	FSM	ENSG00000227500.10	ENST00000414057.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	107.902548626064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACCCAGCAAACCGG	-12	True	NA	NA	False	NA	NA	NA	1905377	1925016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1905440_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_45509.nic	chr19	+	1361	2	ISM	ENSG00000227500.10	ENST00000460767.5	569	6	-39	2710	-20	-1910	intron_retention	FALSE	canonical	3	233	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGGAGATACAGGAGGA	347	False	NA	NA	False	NA	NA	NA	1905351	1916251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_1905440_1914978
transcript_45510.known	chr19	+	2895	12	FSM	ENSG00000133275.16	ENST00000255641.13	2895	12	0	0	0	0	multi-exon	TRUE	canonical	3	675	junction_2	49.2238939493534	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	12	True	NA	NA	False	AATAAA	-18	NA	1941171	1981338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_1941419_1969507_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
transcript_45511.known	chr19	-	1744	14	FSM	ENSG00000099875.16	ENST00000309340.11	1744	14	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	245.222227435448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	20	False	NA	-12	True	AATAAA	-22	NA	2051224	2037464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
transcript_45512.known	chr19	-	875	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	434.505338159255	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	9104	False	NA	-12	True	AATAAA	-22	NA	2042140	2037464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
transcript_45513.nic	chr19	-	2889	4	ISM	ENSG00000099875.16	ENST00000250896.9	3785	14	9111	0	7	0	3prime_fragment	FALSE	canonical	3	966	junction_1	174.816093843406	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	9111	False	NA	-18	True	AATAAA	-16	NA	2042133	2037470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839
transcript_45516.known	chr19	-	631	3	FSM	ENSG00000099875.16	ENST00000591588.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	1252	junction_1	66.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGCATGAAGCCCCTTC	8	True	NA	NA	False	GGGGCT	-5	NA	2042082	2039954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2040178_2041039_2041205_2041839
transcript_45518.known	chr19	-	3387	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	11.3880419739304	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTGTCGTTTTCCTG	-25	True	NA	-30	True	AATAAA	-23	NA	2096326	2071035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
transcript_45519.known	chr19	+	975	10	FSM	ENSG00000099840.14	ENST00000395301.8	975	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.16617929972778	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTTCTTGTTGGGGCA	17	True	NA	18	True	ATTAAA	-23	NA	2096914	2099590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435_2098451_2098786_2098805_2098975_2099030_2099254
transcript_45522.nnic	chr19	-	1165	6	NNC	ENSG00000104886.12	novel	1218	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	392	junction_5	552.077675694281	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	693	False	2236348	-5	True	AATAAA	-18	NA	2236333	2233152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235934_2236154
transcript_45523.known	chr19	-	1218	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_5	95.1012092457294	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-15	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_45524.known	chr19	-	1329	6	FSM	ENSG00000104886.12	ENST00000589791.5	1329	6	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_5	687.251453254193	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	3	True	NA	-7	True	AATAAA	-16	NA	2236665	2233154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236377
transcript_45533.known	chr19	-	1092	5	FSM	ENSG00000104886.12	ENST00000591099.6	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	732.086402004572	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	20	True	NA	-5	True	AATAAA	-18	NA	2236294	2233152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2233906_2233997_2234062_2235761_2235829_2235922_2235991_2236154
transcript_45536.known	chr19	-	1311	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_4	98.3221745080935	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGTGAAGTGAAGGAG	-12	True	NA	-1	True	AATAAA	-22	NA	2236326	2233148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_45542.known	chr19	+	1619	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	72.6428549480264	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	-15	True	NA	24	True	ATTAAA	-13	NA	2236823	2248655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
transcript_45544.known	chr19	+	3691	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	50.813635081581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTTGCTGAGGC	-3	True	NA	NA	False	ATTAAA	-13	NA	2328683	2355095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
transcript_45556.known	chr19	+	1012	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	3437.6473867393	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	NA	False	NA	119	True	AATAAA	-15	NA	2269508	2273488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
transcript_45559.known	chr19	-	512	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	1440.53323460446	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	3830	False	NA	-15	True	AATAAA	-15	NA	2328611	2321520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
transcript_45565.known	chr19	+	969	6	FSM	ENSG00000104904.12	ENST00000582888.8	969	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	3554.80654888561	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	9	False	NA	33	True	AATAAA	-20	NA	2269533	2273331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2269745_2271390_2271443_2271443_2271531_2271781_2271955_2272734_2272821_2272971
transcript_45566.known	chr19	+	1131	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	7210	junction_3	202.455482075004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	0	True	NA	8	True	NA	NA	NA	2269519	2273221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
transcript_45567.known	chr19	-	575	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	3817	junction_2	174.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAGCCCCGAATCTT	2	True	NA	-14	True	AATAAA	-16	NA	2328586	2321519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2321823_2324124_2324197_2328386
transcript_45568.known	chr19	+	2583	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	65.0480199388051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	6	True	NA	30	True	AATAAA	-19	NA	2328692	2353933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
transcript_45569.known	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1942.2609391005	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	3964	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
transcript_4557.known	chr1	+	2360	11	FSM	ENSG00000117054.15	ENST00000541113.6	2360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	190.627621293453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	0	True	NA	-66	True	AAAAAG	-19	NA	75724430	75763596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75761121_75761371_75762691
transcript_45571.known	chr19	-	1664	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	4197	junction_1	86	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCTTGATCCGCTGG	-19	True	NA	-1	True	AATAAA	-38	NA	2427586	2425624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2427047_2427255_2427325_2427413
transcript_45572.known	chr19	-	631	3	FSM	ENSG00000099800.8	ENST00000591871.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	2028.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTCTTTATTTCCC	9609	False	NA	-38	True	AATAAA	-16	NA	2427538	2426564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2427047_2427255_2427325_2427458
transcript_45574.nnic	chr19	-	960	5	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	527.011859449102	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	3262	False	NA	-6	True	AATAAA	-14	NA	2433885	2428165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_2428727_2431547_2431659_2431782_2431903_2432415_2432524_2433825
transcript_45575.known	chr19	-	4634	12	FSM	ENSG00000176619.13	ENST00000325327.4	4634	12	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_8	78.4568102485703	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-5	True	NA	-6	True	AATAAA	-14	NA	2456959	2428165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
transcript_45578.known	chr19	+	750	4	FSM	ENSG00000099860.9	ENST00000585359.1	750	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.7320284243028	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGAACCCCCTCCCC	19	False	NA	NA	False	AATACA	-4	NA	2476145	2477657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2476403_2476528_2476629_2477028_2477252_2477487
transcript_45579.known	chr19	-	4193	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	16.3324829710611	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTGGGCTGTTC	-2	True	NA	-8	True	AATAAA	-20	NA	2702694	2511218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
transcript_4558.known	chr1	+	2315	11	FSM	ENSG00000117054.15	ENST00000680805.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	193.371378440554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	0	True	NA	-66	True	AAAAAG	-19	NA	75724430	75763596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75750450_75750547_75761121_75761371_75762691
transcript_45583.known	chr19	-	2940	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTCCACACGGGCA	-17	True	NA	-37	True	AATAAA	-18	NA	2740028	2734523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2737380_2739944
transcript_45584.known	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-6	True	NA	-4	True	TTTAAA	-32	NA	2740017	2732523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2733486_2737047_2737380_2739944
transcript_45586.known	chr19	-	2211	12	FSM	ENSG00000104969.11	ENST00000677754.1	2211	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	238.442847943773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	1	True	NA	-24	True	NA	NA	NA	2783327	2754734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2755934_2757336_2757458_2757692_2757729_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_45587.known	chr19	-	2316	12	FSM	ENSG00000104969.11	ENST00000678109.1	2316	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	233.105126498754	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	7	False	NA	-12	True	AATAAA	-9	NA	2783362	2754722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768964_2769092_2783232
transcript_45588.known	chr19	+	8504	4	FSM	ENSG00000186300.12	ENST00000334241.9	8504	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.71404520791032	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAAAAAGCTTCAC	-2	True	NA	NA	False	ATTAAA	-16	NA	2841474	2860471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852379
transcript_4559.known	chr1	+	2393	11	FSM	ENSG00000117054.15	ENST00000680694.1	2393	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	248.702251698693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGACTTCAGAAAAT	0	True	NA	-32	True	AATAAA	-27	NA	75724430	75763630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75734790_75734876_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_45593.known	chr19	+	1970	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.01387685344754	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	-24	True	NA	NA	False	AATAAA	-17	NA	2900927	2918473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
transcript_45596.known	chr19	-	2040	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.96655480858378	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTATATTTTGTAATT	-25	True	NA	-3	True	AATAAA	-23	NA	2944971	2933217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
transcript_45597.known	chr19	+	1977	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	9.36895638531848	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	-3	True	NA	8	True	AATAAA	-17	NA	2977563	2995179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_4560.known	chr1	+	3185	11	FSM	ENSG00000117054.15	ENST00000680582.1	3185	11	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	57.9724934775105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTAAACTGTGTTATAC	0	True	NA	-17	True	NA	NA	NA	75724430	75763720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_45600.known	chr19	+	1559	8	FSM	ENSG00000104953.20	ENST00000497878.5	1559	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.1832345778131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGTAATAAAGCACCCGG	5255	False	NA	-20	True	NA	NA	NA	2987410	2995151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2987439_2987723_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_45602.known	chr19	+	456	3	FSM	ENSG00000104953.20	ENST00000482627.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	NA	False	NA	27	True	ATTAAA	-44	NA	2977549	2980407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_2977611_2978197_2978285_2980099
transcript_4561.known	chr1	+	2235	11	FSM	ENSG00000117054.15	ENST00000681916.1	2235	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	239.899666527488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTAAACTGTGTTATAC	-20	True	NA	-17	True	NA	NA	NA	75724702	75763720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75732643_75732742_75732837_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_45611.nic	chr19	-	1040	5	ISM	ENSG00000065717.15	ENST00000455444.6	2253	18	23059	5	2804	0	3prime_fragment	FALSE	canonical	3	162	junction_2	34.4492380176979	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	NA	False	NA	-25	True	AATAAA	-15	NA	3006072	2997643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720
transcript_45613.known	chr19	-	1798	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	0	0	0	multi-exon	FALSE	canonical	3	2362	junction_2	226.945478033822	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	26	True	NA	-10	True	AATAAA	-16	NA	3062495	3052909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
transcript_45614.known	chr19	-	1884	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	990.7935652238	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-1	True	NA	-10	True	AATAAA	-16	NA	3063107	3052909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
transcript_45615.nnic	chr19	-	1488	7	NNC	ENSG00000104964.15	novel	1798	7	NA	NA	286	53	intron_retention	FALSE	non_canonical	0	0	junction_6	1013.02376027855	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTTTTTATTTT	-13	True	NA	-29	True	AATAAA	-16	NA	3061904	3053158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3061643
transcript_45619.known	chr19	+	4190	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	8.13941029804985	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	-12	True	NA	14	True	AATAAA	-14	NA	3094361	3123999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
transcript_4562.known	chr1	+	1451	11	FSM	ENSG00000117054.15	ENST00000526196.5	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	164.372777551515	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGTGTTTTCTTTA	-17	True	NA	NA	False	NA	NA	NA	75724705	75762954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_45620.nic	chr19	+	1877	4	ISM	ENSG00000060558.4	ENST00000262958.4	2273	7	15167	0	1360	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGCCAGCGTCCTGTTTA	1363	False	NA	5	True	ATTAAA	-17	NA	3151199	3163749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_3151836_3155822_3155953_3157727_3157882_3162792
transcript_45622.known	chr19	+	1755	10	FSM	ENSG00000141905.19	ENST00000395111.7	1755	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGACGCCGGCCGCC	15	True	NA	NA	False	NA	NA	NA	3359646	3463142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3359686_3381711_3382244_3425105_3425178_3433517_3433593_3434276_3434401_3435082_3435208_3449013_3449140_3452481_3452667_3456549_3456636_3462751
transcript_45626.nic	chr19	+	837	5	ISM	ENSG00000141905.19	ENST00000590282.5	1558	10	68392	-58	-71	-9	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAAT	-24	True	NA	26	True	AAGAAA	-12	NA	3434974	3462958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_3435208_3449013_3449140_3452481_3452667_3456549_3456636_3462751
transcript_45627.known	chr19	+	977	4	FSM	ENSG00000141905.19	ENST00000589537.1	977	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACCTCTCCCCGGGCCC	47	False	NA	NA	False	NA	NA	NA	3435045	3463255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3435208_3449013_3449140_3452481_3452667_3462751
transcript_45628.known	chr19	-	1312	4	FSM	ENSG00000095932.7	ENST00000215531.6	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCGCTCTGTCA	-2	True	NA	NA	False	NA	NA	NA	3480525	3473985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3474997_3478418_3478479_3478817_3478930_3480396
transcript_45631.known	chr19	-	820	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	4508	False	NA	-120	True	NA	NA	NA	3479088	3474507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3474997_3478418_3478479_3478817
transcript_45632.known	chr19	-	660	2	FSM	ENSG00000095932.7	ENST00000591708.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	2	True	NA	-19	True	ATTAAA	-21	NA	3478488	3474406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3474997_3478418
transcript_45636.known	chr19	+	5178	14	FSM	ENSG00000105325.15	ENST00000441788.7	5178	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_10	21.1824980786514	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGTTCAGTACCTTCA	2	True	NA	19	True	AATACA	-22	NA	3506310	3538334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3534420_3534514_3534794
transcript_45638.known	chr19	-	1769	1	FSM	ENSG00000161091.14	ENST00000585788.1	1769	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCCAACAAACATCCA	7962	False	NA	NA	False	AATAAA	-21	NA	3540043	3538274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3538300_3540000
transcript_4564.nic	chr1	+	1365	11	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_4	189.628294302301	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	-8	True	NA	12	True	AATAAA	-26	NA	75786250	75794803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_45640.known	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	5.5	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	12	True	NA	28	True	AATAAA	-22	NA	3762681	3767565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3762819_3765165_3765332_3767260
transcript_45641.known	chr19	-	2098	14	FSM	ENSG00000007264.15	ENST00000310132.11	2098	14	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_12	24.4414528083871	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCGCCTGTGTGTCTC	8	True	NA	-6	True	GATAAA	-17	NA	3786381	3777972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
transcript_45642.known	chr19	-	1019	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	37.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	13	True	NA	-1	True	AATAAA	-25	NA	3869015	3851804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3852615_3855401_3855560_3868964
transcript_45643.nic	chr19	-	1190	3	NIC	ENSG00000105278.12	novel	1019	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_2	27	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	5	False	NA	-1	True	AATAAA	-25	NA	3869049	3851804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_3852615_3855401_3855697_3868964
transcript_45644.known	chr19	-	870	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAAATGTGAATTTCAT	-4	True	NA	-9	True	AATAAA	-17	NA	3869032	3851812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3852615_3868964
transcript_45645.known	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	8.50939023797958	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	14	True	NA	18	True	AATAAA	-18	NA	3880684	3928082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
transcript_45646.nic	chr19	+	1041	7	ISM	ENSG00000077009.14	ENST00000168977.7	1160	8	398	0	-140	0	3prime_fragment	FALSE	canonical	3	625	junction_5	175.169124625952	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGTGTCTACCGTGTT	-4	True	NA	12	True	AGTAAA	-20	NA	3933466	3942416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_45655.known	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6813	junction_14	678.896001322916	4604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-1	True	NA	-14	True	AATAAA	-17	NA	3985463	3976055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
transcript_45681.known	chr19	-	1727	11	FSM	ENSG00000126934.15	ENST00000262948.10	1727	11	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_9	95.4792647646598	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	-16	True	NA	-8	True	AAAAAG	-5	NA	4124122	4090320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4099200_4099415_4101018_4101144_4101228_4101281_4102375_4102454_4110508_4110656_4117418_4117630_4123783
transcript_45683.nic	chr19	-	1575	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	22.4862769942297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	4182578	4174108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_45684.nic	chr19	-	1635	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-56	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	25.1249936541773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	223	False	NA	-4	True	AATAAA	-19	NA	4182335	4174108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182210
transcript_45685.known	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.4310342387469	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-5	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_45687.known	chr19	-	1473	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	24.6537128148187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGTGTGTTTACTTTA	-7	True	NA	-5	True	AATAAA	-18	NA	4182565	4174109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_45688.known	chr19	-	827	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	24.6080384337223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTCCCCAGCTGAC	58	False	NA	NA	False	NA	NA	NA	4182500	4174635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_45689.nic	chr19	-	2143	7	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	57	junction_1	9.47657931721967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	4182578	4174108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_4174947_4175027_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_45692.nic	chr19	-	928	2	ISM	ENSG00000077463.15	ENST00000594279.5	1507	8	-56	5966	-56	505	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCAAGG	223	False	NA	NA	False	NA	NA	NA	4182335	4180106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_4180910_4182210
transcript_45693.known	chr19	-	371	2	FSM	ENSG00000077463.15	ENST00000594341.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAATTCCAGACCAGC	12	True	NA	NA	False	NA	NA	NA	4182546	4180611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4180910_4182473
transcript_45694.known	chr19	+	1158	5	FSM	ENSG00000105246.6	ENST00000221847.6	1158	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.22474487139159	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGATGTTGC	1	True	NA	5	True	AATAAA	-1	NA	4229522	4237528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4229618_4231190_4231324_4233128_4233308_4234666_4234825_4236935
transcript_45695.known	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	24.9423825842599	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	-18	True	NA	23	True	AATAAA	-15	NA	4247079	4269088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
transcript_45697.nic	chr19	+	1050	3	ISM	ENSG00000105251.11	ENST00000593383.1	558	4	1168	-69	-180	0	3prime_fragment	FALSE	canonical	3	46	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	4411	False	NA	17	True	AATAAA	-13	NA	4284250	4290722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_4284905_4288242_4288363_4290446
transcript_45698.known	chr19	-	1212	5	FSM	ENSG00000167664.8	ENST00000595645.5	1212	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	1.92028643696715	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	0	True	NA	NA	False	AATAAA	-17	NA	4302393	4292231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4292886_4294578_4294681_4294774_4294817_4297985_4298346_4302339
transcript_45699.known	chr19	+	1634	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	122.976595560113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	16	True	NA	-15	True	NA	NA	NA	4304675	4323806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
transcript_45701.known	chr19	+	1833	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_8	30.1602203057088	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	-12	True	NA	15	True	AATAAA	-15	NA	4304597	4323836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_45709.known	chr19	-	1376	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.1767938802135	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-16	True	NA	-3	True	ATTAAA	-16	NA	4338827	4324042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_45710.known	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.4550901292398	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-10	True	NA	-3	True	ATTAAA	-16	NA	4338821	4324042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_45711.nic	chr19	-	1305	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	37.3553408176569	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	3813	False	NA	-3	True	ATTAAA	-16	NA	4338891	4324042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_45713.nic	chr19	-	1365	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	36.5739373401605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	3813	False	NA	-3	True	ATTAAA	-16	NA	4338891	4324042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_45716.known	chr19	-	409	4	FSM	ENSG00000178078.12	ENST00000601956.5	409	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	44.1688678696759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	NA	False	NA	-3	True	ATTAAA	-16	NA	4326952	4324042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941
transcript_45717.known	chr19	+	1614	13	FSM	ENSG00000008382.16	ENST00000599840.6	1614	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	28.6078611962206	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCACGCTGGTCTCCC	-2	True	NA	6	True	AATAAA	-16	NA	4343561	4360078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_45718.known	chr19	+	1475	11	FSM	ENSG00000008382.16	ENST00000359935.8	1475	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	46.1415214313529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACGCTGGTCTCCCCAA	-10	True	NA	9	True	AATAAA	-19	NA	4343553	4360081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_45720.known	chr19	-	2516	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_6	56.2869631639709	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	-43	True	NA	-8	True	ATTAAA	-15	NA	4400547	4360369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
transcript_45723.known	chr19	-	1915	11	FSM	ENSG00000167671.12	ENST00000301281.11	1915	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	7.9724525711979	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGGTTCTCCGTTGA	-4	True	NA	NA	False	AATAAA	-18	NA	4457794	4445005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4445624_4446048_4446198_4446282_4446414_4446499_4446720_4446835_4446921_4447549_4447626_4448317_4448416_4452363_4452493_4453457_4453523_4453929_4454094_4457614
transcript_45725.known	chr19	+	2027	1	FSM	ENSG00000280239.1	ENST00000624986.1	2027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGACGCATTCTCATA	NA	False	NA	NA	False	AATAAA	-27	NA	4448809	4450836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4448800_4450800
transcript_45728.known	chr19	+	2267	16	FSM	ENSG00000167674.15	ENST00000616600.5	2267	16	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_6	50.6234025811076	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	26	True	NA	3	True	TATAAA	-20	NA	4472296	4502207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
transcript_45731.nnic	chr19	-	848	6	NNC	ENSG00000074842.8	novel	990	6	NA	NA	244	0	at_least_one_novel_splicesite	TRUE	canonical	1	19	junction_5	355.949659362107	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	253	False	NA	-47	True	AATAAA	-20	NA	4670098	4657544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670058
transcript_45732.known	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_5	114.448940580505	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	9	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
transcript_45733.known	chr19	-	2025	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_3	12.0715459748212	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGACTGTCTGTGGTCGC	50	True	NA	-5	True	AATAAA	-35	NA	4723750	4694316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_45734.known	chr19	-	2684	2	FSM	ENSG00000127666.11	ENST00000248244.6	2684	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCAGCGCCATTGTCTTC	7	True	NA	-24	True	AATAAA	-16	NA	4831712	4815931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4818517_4831613
transcript_45736.known	chr19	-	2154	8	FSM	ENSG00000105355.9	ENST00000592528.5	2154	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	288.876076813401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	27	False	NA	-45	True	NA	NA	NA	4867653	4838368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852266_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_45738.known	chr19	-	1535	8	FSM	ENSG00000105355.9	ENST00000585479.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	278.185813690734	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGGCTCTCAAAACGG	NA	False	NA	NA	False	NA	NA	NA	4867694	4839061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_4839534_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_45742.known	chr19	+	3042	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_18	245.553537950484	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-11	True	NA	56	True	AATAAA	-26	NA	5623098	5668478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
transcript_45744.known	chr19	+	3014	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_14	147.194802897385	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	8	True	NA	44	True	AATAAA	-14	NA	5623117	5668466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_45751.nic	chr19	-	2128	14	ISM	ENSG00000130254.12	ENST00000252542.9	3167	21	-249	8463	-249	3023	5prime_fragment	FALSE	canonical	3	171	junction_7	35.8547365096652	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAGAGACATCTTGTC	3454	False	NA	NA	False	NA	NA	NA	5623025	5595461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_45752.nic	chr19	-	1904	12	ISM	ENSG00000130254.12	ENST00000252542.9	3167	21	-249	13227	-249	0	5prime_fragment	FALSE	canonical	3	171	junction_5	37.5941792575604	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAGGAAAAAAAGCCTGAA	3454	False	NA	1	True	AATAGA	-35	NA	5623025	5600225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_45753.known	chr19	+	3064	21	FSM	ENSG00000160633.13	ENST00000588852.2	3064	21	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_14	192.703522282287	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-27	True	NA	56	True	AATAAA	-26	NA	5623082	5668478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_45755.nic	chr19	-	1869	11	ISM	ENSG00000130254.12	ENST00000252542.9	3167	21	-249	17584	-249	-4357	5prime_fragment	FALSE	canonical	3	171	junction_4	39.0865705837696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTGAATTTTCAAACC	3454	False	NA	60	True	NA	NA	NA	5623025	5604582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_45756.nic	chr19	-	1812	11	ISM	ENSG00000130254.12	ENST00000252542.9	3167	21	-249	17641	-249	-4414	5prime_fragment	FALSE	canonical	3	171	junction_4	39.0865705837696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAATTATCGAGTG	3454	False	NA	3	True	AAAAAG	-30	NA	5623025	5604639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_45764.known	chr19	-	3167	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_14	38.4765837880652	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGTGCGCGTGCACA	9	True	NA	-19	True	AATAAA	-15	NA	5622776	5586998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_45765.known	chr19	+	1553	6	FSM	ENSG00000167733.14	ENST00000577917.5	1553	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	39.0312695156076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	0	True	NA	17	True	AATAAA	-19	NA	5680764	5688522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687915
transcript_45769.known	chr19	+	730	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	23.4236347876812	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	17	True	NA	NA	False	AATAAA	-23	NA	5681047	5685589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
transcript_45772.known	chr19	+	449	5	FSM	ENSG00000130255.13	ENST00000579649.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6654.95095304992	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	NA	False	NA	37	True	AATAAA	-17	NA	5674946	5691667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5674973_5690332_5690390_5690505_5690601_5691318_5691454_5691531
transcript_45774.known	chr19	-	655	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	233.807613220785	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-9	True	NA	-7	True	AATAAA	-15	NA	5680252	5678421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
transcript_45775.known	chr19	-	516	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	28.9865869364129	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5	True	NA	-7	True	AATAAA	-15	NA	5680516	5678421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
transcript_45776.known	chr19	-	577	4	FSM	ENSG00000174917.9	ENST00000587589.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	228.824532484318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCTGGTAT	422	False	NA	NA	False	AATAAA	-2	NA	5680488	5678914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5679231_5679344_5679397_5679585_5679764_5680457
transcript_45778.known	chr19	+	399	3	FSM	ENSG00000167733.14	ENST00000577701.1	399	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCGAGGAAA	24	True	NA	NA	False	AATAAA	-44	NA	5681054	5685328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5681272_5684964_5685120_5685301
transcript_45785.known	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	2798.47784022354	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	-1	True	NA	21	True	ATTAAA	-17	NA	5690294	5691875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
transcript_45786.known	chr19	+	556	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	12706	junction_2	881	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	-2	True	NA	37	True	AATAAA	-17	NA	5690315	5691667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5690601_5691318_5691454_5691531
transcript_45787.known	chr19	+	452	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	3309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	10	False	NA	23	True	AATAAA	-3	NA	5690305	5691653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5690328_5690505_5690601_5691318
transcript_45789.known	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	1264.17621398284	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	9	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_45792.known	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2498	junction_1	205.647486950094	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-27	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
transcript_45796.known	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2801	junction_1	98.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-8	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5896576_5896904_5896998_5903611
transcript_45797.known	chr19	-	1762	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_9	89.1865460705817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACATTAAGACTTGTC	12	True	NA	-37	True	NA	NA	NA	5978086	5917351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_45798.known	chr19	-	1783	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	0	0	0	0	multi-exon	TRUE	canonical	3	245	junction_9	97.6100177008259	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGACTGGAGACCTCG	5	True	NA	-8	True	NA	NA	NA	5978093	5917322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_45799.known	chr19	-	787	6	FSM	ENSG00000087903.13	ENST00000586940.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.79743547584717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCCTCCTTAAGAAAG	23	True	NA	NA	False	AATACA	-33	NA	6110478	6027163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6027335_6039979_6040242_6042043_6042124_6044192_6044283_6047406_6047505_6110392
transcript_45800.known	chr19	-	535	4	FSM	ENSG00000087903.13	ENST00000593241.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.71722460186015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGGAGCCCCATCGTCT	-26	True	NA	NA	False	NA	NA	NA	6110601	6040085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6040242_6042043_6042124_6044192_6044283_6110392
transcript_45801.nnic	chr19	+	370	2	FSM	ENSG00000266983.2	ENST00000692109.1	388	2	16	2	7	-2	multi-exon	FALSE	canonical	3	39	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGCGTCTGCTGATT	-6	True	NA	11	True	AATAAA	-16	NA	5978370	5980727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_5978515_5980501
transcript_45805.known	chr19	+	2410	6	FSM	ENSG00000125656.11	ENST00000245816.11	2410	6	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_2	39.5808034279245	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGCGGTGGCTCACGCC	-37	True	NA	NA	False	AATAAA	-19	NA	6361530	6370242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6361773_6361868_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
transcript_45807.known	chr19	+	745	5	FSM	ENSG00000125656.11	ENST00000596149.5	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	38.0558799661761	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGACCCCCAGCTGGGC	8	True	NA	NA	False	NA	NA	NA	6361803	6368754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
transcript_45809.known	chr19	+	621	4	FSM	ENSG00000125656.11	ENST00000596605.2	621	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	248.666219838741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTCTGGGACACCC	39	False	NA	20	True	ATTAAA	-15	NA	6361887	6368902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6361941_6362445_6362543_6366257_6366364_6368537
transcript_45810.known	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	48.8011839564939	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	-6	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
transcript_45811.known	chr19	+	603	4	FSM	ENSG00000125652.8	ENST00000596657.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	271.101866873362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	494	False	NA	11	True	AATAAA	-18	NA	6373470	6375027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6373558_6374202_6374377_6374464_6374590_6374810
transcript_45812.known	chr19	+	556	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	273.45850792315	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	727	False	NA	15	True	AATAAA	-22	NA	6373703	6375031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
transcript_45813.nnic	chr19	+	685	4	NNC	ENSG00000125652.8	novel	970	4	NA	NA	149	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	256.019530504999	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	876	False	NA	15	True	AATAAA	-22	NA	6373852	6375031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_6374018_6374202_6374377_6374464_6374590_6374810
transcript_45814.known	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	23.1641185649031	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-13	True	NA	-35	True	AATAAA	-18	NA	6393164	6379571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
transcript_45820.known	chr19	-	2993	20	FSM	ENSG00000088247.19	ENST00000398148.7	2993	20	0	0	0	0	multi-exon	FALSE	canonical	2	137	junction_1	99.684488411773	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTGCGGGTGCTGTCT	9005	False	NA	28	True	AATAAA	-16	NA	6424794	6413347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
transcript_45821.known	chr19	-	1535	7	FSM	ENSG00000181240.14	ENST00000321510.7	1535	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.37436854187255	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTGGATACTTGGGCC	-3	True	NA	1	True	AATAAA	-19	NA	6433763	6426036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6426562_6427102_6427251_6427333_6427502_6429723_6429832_6430008_6430162_6432048_6432205_6433486
transcript_45824.nic	chr19	-	1938	12	ISM	ENSG00000205744.10	ENST00000381480.7	2795	23	6019	3	447	0	3prime_fragment	FALSE	canonical	2	5	junction_11	10.240900012101	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTACTAATTTTATATAA	6016	False	NA	-8	True	AATAAA	-15	NA	6475768	6467209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471306_6471405_6471497_6472888_6472994_6475273_6475400_6475483_6475586_6475705
transcript_45828.nic	chr19	-	2172	12	ISM	ENSG00000205744.10	ENST00000543576.5	2395	21	5549	-52	8	52	intron_retention	FALSE	canonical	2	5	junction_11	10.240900012101	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTTTCCTGGTGA	-7	True	NA	NA	False	AATAAA	-20	NA	6476238	6467445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471306_6471405_6471497_6472888_6472994_6475273_6475400_6475483_6475586_6475705
transcript_4583.known	chr1	+	1941	10	FSM	ENSG00000117054.15	ENST00000681450.1	1941	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	284.062503989596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	38	True	NA	-66	True	AAAAAG	-19	NA	75724760	75763596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75734790_75734876_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_45838.known	chr19	+	733	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	68.9002902751505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	9	True	NA	NA	False	TATAAA	-24	NA	6464282	6467221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
transcript_45839.known	chr19	+	1086	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	9.41629792788369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	-3	True	NA	NA	False	TATAAA	-24	NA	6464270	6467221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
transcript_45849.known	chr19	-	2009	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	47.2346714485367	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAATAATGACCAAT	11	True	NA	-35	True	NA	NA	NA	6737260	6730085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_45851.nnic	chr19	-	1821	18	NNC	ENSG00000125734.16	novel	2034	18	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	62.4365698890928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-34	True	NA	-4	True	NA	NA	NA	6737305	6730054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737253
transcript_45852.nic	chr19	-	1812	18	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	61.3514466007119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-39	True	NA	-4	True	NA	NA	NA	6737310	6730054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737267
transcript_45853.known	chr19	-	2057	18	FSM	ENSG00000125734.16	ENST00000264080.12	2034	18	-23	0	-23	0	multi-exon	FALSE	canonical	3	172	junction_17	29.4583161016249	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGCATGCAGGGCCCAA	-14	True	NA	NA	False	AATAAA	-15	NA	6737603	6729913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_45855.nnic	chr19	-	1957	18	NNC	ENSG00000125734.16	novel	2034	18	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	60.8416175174964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-23	True	NA	-4	True	NA	NA	NA	6737612	6730054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_6730385_6730986_6731112_6731198_6731315_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_45869.known	chr19	-	1834	18	FSM	ENSG00000125734.16	ENST00000597706.5	1834	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.0208950903832	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCAGCTATGTGTACA	29	False	NA	-47	True	NA	NA	NA	6737560	6730097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732471_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_45871.known	chr19	+	1920	14	FSM	ENSG00000125733.18	ENST00000596758.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	195.520001549502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATACAAAAATGGG	67	False	NA	28	True	NA	NA	NA	6739761	6751464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751033
transcript_45872.known	chr19	+	2035	14	FSM	ENSG00000125733.18	ENST00000313285.12	2035	14	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_7	44.0587289607081	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	-15	True	NA	33	True	TATAAA	-18	NA	6739679	6751526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_45878.nic	chr19	+	2098	13	NIC	ENSG00000125733.18	novel	2035	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	651	junction_6	41.5668805126817	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGAGTCGGTGTCTT	4	True	NA	16	True	TATAAA	-1	NA	6739698	6751509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_6739786_6741009_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_45880.nic	chr19	-	1176	4	ISM	ENSG00000125731.13	ENST00000597687.1	859	6	-59	4502	-59	-1788	5prime_fragment	FALSE	canonical	3	67	junction_2	17.5941909605289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACAATTATTCCAAG	NA	False	NA	NA	False	NA	NA	NA	6767522	6759117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6759671_6760637_6760988_6763679_6763817_6767386
transcript_45881.known	chr19	-	2281	10	FSM	ENSG00000125731.13	ENST00000245908.11	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	19.94993734326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCTGTGTACTTTCT	9	True	NA	-1	True	AATAAA	-22	NA	6767435	6752159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_45882.nic	chr19	-	1444	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-97	7603	-59	-5179	5prime_fragment	FALSE	canonical	3	110	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGCCGGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	6767522	6762508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6763817_6767386
transcript_45883.nic	chr19	-	1270	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-97	7777	-59	-5353	5prime_fragment	FALSE	canonical	3	110	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGAAAATTATCCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	6767522	6762682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_6763817_6767386
transcript_45884.known	chr19	+	5759	8	FSM	ENSG00000130544.12	ENST00000252840.11	5759	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.99489470117416	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	5	True	NA	NA	False	ATTAAA	-30	NA	7069702	7087968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_45885.known	chr19	+	5736	8	FSM	ENSG00000130544.12	ENST00000414706.2	5736	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	5.72855361593241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	7	True	NA	NA	False	ATTAAA	-30	NA	7069704	7087968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075675_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_45887.nic	chr19	+	1290	7	ISM	ENSG00000130544.12	ENST00000252840.11	5759	8	-238	5532	-238	-5532	5prime_fragment	FALSE	canonical	3	10	junction_3	4.31083905212585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGGCTTTATTAAATA	21	True	NA	NA	False	NA	NA	NA	7069464	7082436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969
transcript_45888.nic	chr19	+	1573	6	ISM	ENSG00000130544.12	ENST00000252840.11	5759	8	-6	5531	-6	-5531	intron_retention	FALSE	canonical	3	10	junction_3	4.17612260356422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGCTTTATTAAATAG	-1	True	NA	NA	False	NA	NA	NA	7069696	7082437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359
transcript_45897.known	chr19	-	1345	7	FSM	ENSG00000104883.8	ENST00000593942.5	1345	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.7312498620492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGGCTCAGGGGTGAAG	6	True	NA	-7	True	ATTAAA	-15	NA	7497449	7476875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7489347_7489513_7490981_7491123_7497402
transcript_45898.known	chr19	-	1078	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.07106781186548	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-12	True	NA	-6	True	ATTAAA	-16	NA	7489035	7476874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_45901.nic	chr19	+	1601	10	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19414	0	-130	0	3prime_fragment	FALSE	canonical	3	317	junction_5	30.2683471551747	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	24	True	AATAAA	-16	NA	7555130	7561764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_45903.nic	chr19	+	1463	9	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19791	0	247	0	3prime_fragment	FALSE	canonical	3	317	junction_4	28.6222706122348	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	24	True	AATAAA	-16	NA	7555507	7561764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_45905.nic	chr19	+	997	5	ISM	ENSG00000076826.10	ENST00000595692.1	1667	6	974	-209	-798	0	3prime_fragment	FALSE	canonical	3	305	junction_2	12.9879752078605	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	NA	False	NA	30	True	AATAAA	-16	NA	7615607	7618304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
transcript_45907.known	chr19	-	2647	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_7	14.6181858664026	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGAGCCTCCTTCCTG	7	True	NA	-2	True	AATACA	-18	NA	7629545	7619524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
transcript_45913.known	chr19	+	1914	19	FSM	ENSG00000076944.17	ENST00000441779.6	1914	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	125.102291479147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCCTACCTCACCT	-13	True	NA	20	True	AATAAA	-20	NA	7637112	7647872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640697_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_45915.known	chr19	+	1859	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	124.249214419853	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	1	True	NA	21	True	AATAAA	-21	NA	7637126	7647873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_45919.nic	chr19	+	1763	18	NIC	ENSG00000076944.17	novel	1885	19	NA	NA	-31	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_17	123.569041262274	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	7276	False	NA	21	True	AATAAA	-21	NA	7637073	7647873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640730_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647724
transcript_45930.known	chr19	+	375	5	FSM	ENSG00000229833.10	ENST00000598540.6	375	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	1542.1656039479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	41	False	NA	17	True	AATATA	-26	NA	7629838	7631624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231_7631322_7631472
transcript_45933.nic	chr19	+	576	4	ISM	ENSG00000229833.10	ENST00000598540.6	375	5	-54	4	-8	0	intron_retention	FALSE	canonical	3	52	junction_3	1448.59502814125	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	-13	True	NA	13	True	AATATA	-22	NA	7629784	7631620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231
transcript_45934.known	chr19	+	663	4	FSM	ENSG00000229833.10	ENST00000594797.6	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	2922	junction_1	200.594671470162	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCATTTGAGTGTGAG	-5	True	NA	NA	False	NA	NA	NA	7629792	7631956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631472
transcript_45937.known	chr19	+	332	3	FSM	ENSG00000229833.10	ENST00000601406.5	332	3	0	0	0	0	multi-exon	FALSE	canonical	3	2922	junction_1	186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCCATGTCTACAGAAA	26	False	NA	NA	False	NA	NA	NA	7629823	7631030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630572_7630660_7630822
transcript_45939.known	chr19	+	219	3	FSM	ENSG00000229833.10	ENST00000456958.7	219	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1678.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	16	True	NA	13	True	AATATA	-22	NA	7629813	7631620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629861_7630822_7630847_7631472
transcript_45941.known	chr19	+	1815	1	FSM	ENSG00000229833.10	ENST00000623154.1	1815	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTGTTTTATTCTTT	11	True	NA	16	True	AATATA	-25	NA	7629808	7631623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7629800_7631600
transcript_45942.known	chr19	-	1482	10	FSM	ENSG00000104921.15	ENST00000360067.8	1482	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.36986977843755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCTGGGTCTGGTC	2649	False	NA	-1	True	AATAAA	-41	NA	7699479	7688757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7689431_7690158_7690266_7690405_7690558_7696824_7696915_7697012_7697076_7697235_7697299_7697526_7697590_7698355_7698410_7698740_7698855_7699376
transcript_45947.known	chr19	+	3590	3	FSM	ENSG00000171017.11	ENST00000306708.11	3590	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTTTTGATCTCTTA	-2	True	NA	7	True	AATAAA	-18	NA	7888509	7902016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7888601_7895598_7895742_7898660
transcript_45948.known	chr19	+	3375	11	FSM	ENSG00000076984.18	ENST00000397979.4	3375	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	7.44580418759451	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	-6	True	NA	19	True	AATAAA	-19	NA	7903876	7914478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_45949.known	chr19	+	1413	5	FSM	ENSG00000104976.12	ENST00000597584.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	81.8138130146738	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	-5	True	NA	33	True	AATAAA	-24	NA	7921014	7923250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_7921120_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_45952.known	chr19	-	1797	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_9	127.884143531036	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATTGCAGAAGAGCAGC	93	False	NA	-25	True	AATAAA	-4	NA	7943635	7926735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
transcript_45959.known	chr19	-	556	3	FSM	ENSG00000104980.8	ENST00000600000.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	11.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCCGCCTCAGCCTT	-3	True	NA	NA	False	NA	NA	NA	7943666	7937797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_7938198_7941101_7941198_7943606
transcript_45963.known	chr19	+	991	6	FSM	ENSG00000131142.14	ENST00000315626.6	991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTGTTACATTTCT	-1	True	NA	NA	False	AATAAA	-22	NA	8052759	8062650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057800_8057921_8062217
transcript_45964.known	chr19	+	958	6	FSM	ENSG00000131142.14	ENST00000253451.9	958	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.894427190999916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACCTTGGGGGGTGA	1	True	NA	NA	False	NA	NA	NA	8052761	8062622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057803_8057921_8062217
transcript_45966.known	chr19	+	1780	12	FSM	ENSG00000090661.12	ENST00000251363.10	1780	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	98.782422232646	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	19	True	NA	15	True	ATTAAA	-16	NA	8209369	8262421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_45968.known	chr19	+	1637	11	FSM	ENSG00000090661.12	ENST00000559450.5	1637	11	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	109.123599647372	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	5	True	NA	15	True	ATTAAA	-16	NA	8209355	8262421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8209495_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_45971.known	chr19	-	861	5	FSM	ENSG00000167775.11	ENST00000599573.1	861	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	595.886734203741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGCCCTGGAGATTGA	8362	False	NA	NA	False	NA	NA	NA	8308271	8302316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8302606_8302776_8302981_8303854_8303974_8305030_8305157_8308148
transcript_45972.known	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_2	75.0866166503725	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-24	True	NA	-6	True	ATTAAA	-17	NA	8308358	8302126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
transcript_45974.known	chr19	-	569	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	792.939625696686	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATCCCTGCCCTCCAG	1	True	NA	-5	True	AATAAA	-13	NA	8321375	8308767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
transcript_45979.known	chr19	+	1330	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_3	815.075592949649	3369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCTGAAGTGTGGTT	2	True	NA	25	True	AATAAA	-30	NA	8321495	8323340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
transcript_45982.known	chr19	-	1119	4	FSM	ENSG00000167775.11	ENST00000537716.6	1119	4	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_3	652.793654653257	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-16	True	NA	-6	True	ATTAAA	-17	NA	8308350	8302126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8308148
transcript_45983.known	chr19	-	580	4	FSM	ENSG00000267855.6	ENST00000301457.3	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	1785	junction_2	59.5893353620334	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATGAGCCACCACAC	1	True	NA	53	True	NA	NA	NA	8321375	8311283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8311596_8316495_8316646_8320856_8320907_8321307
transcript_45988.known	chr19	+	1523	3	FSM	ENSG00000233927.5	ENST00000449223.3	1523	3	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_2	320.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCAATCTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	8321157	8322946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321570_8321655_8322092_8322271
transcript_45992.known	chr19	+	912	2	FSM	ENSG00000233927.5	ENST00000602140.1	912	2	0	0	0	0	multi-exon	FALSE	canonical	3	9391	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCGGTCTTGCCAAACG	1	True	NA	173	True	NA	NA	NA	8321494	8322492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321570_8321655
transcript_45994.known	chr19	+	334	3	FSM	ENSG00000233927.5	ENST00000417088.2	334	3	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_2	979	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	140	False	NA	77	True	AATAAA	-21	NA	8321633	8322396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8321704_8321952_8322092_8322271
transcript_45995.known	chr19	+	1590	5	FSM	ENSG00000185236.12	ENST00000328024.11	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_4	166.244360806615	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	-7	True	NA	38	True	NA	NA	NA	8390359	8404434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
transcript_46.known	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00131_+_0_800
transcript_4600.nic	chr1	+	1308	10	NIC	ENSG00000137955.16	novel	1448	9	NA	NA	14	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_2	210.863539045434	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	-3	True	NA	12	True	AATAAA	-26	NA	75786210	75794803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_75786275_75786699_75786798_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_46002.known	chr19	-	1013	3	FSM	ENSG00000269386.6	ENST00000593581.6	1020	3	0	7	0	-6	multi-exon	FALSE	canonical	3	43	junction_2	6.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAAGTGTTCTGAGGTT	-13	True	NA	NA	False	AAAAAG	-23	NA	8390685	8374378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_8374609_8376961_8377068_8390008
transcript_46004.known	chr19	+	2568	17	FSM	ENSG00000099783.12	ENST00000348943.7	2568	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1062.72908559755	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	6019	False	NA	17	True	AATAAA	-17	NA	8444766	8489114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_46007.nic	chr19	+	2377	16	NIC	ENSG00000099783.12	novel	2568	17	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1251.56019964416	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	6156	False	NA	17	True	AATAAA	-17	NA	8444903	8489114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_46010.known	chr19	+	2477	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1053.21734382478	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	-5	True	NA	17	True	AATAAA	-17	NA	8444974	8489114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_46016.nic	chr19	+	2494	15	NIC	ENSG00000099783.12	novel	2477	16	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_3	1261.79900927046	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	6156	False	NA	17	True	AATAAA	-17	NA	8444903	8489114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_46028.known	chr19	+	4056	7	FSM	ENSG00000130803.15	ENST00000247956.11	4056	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	21.8784521085626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	7	True	NA	10	True	AATAAA	-23	NA	9140396	9163413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113
transcript_46029.nic	chr19	+	1129	7	NIC	ENSG00000130803.15	novel	4056	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	65.9865306121046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTTCTTTTAAATT	4	True	NA	21	True	AATAAA	-34	NA	9140393	9163424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9163054
transcript_46047.nic	chr19	+	2724	7	NIC	ENSG00000188321.14	novel	2732	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	18.3431791743477	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	-8	True	NA	16	True	AATAAA	-18	NA	9324179	9343843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_46048.known	chr19	+	4675	7	FSM	ENSG00000188321.14	ENST00000603380.6	4675	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	17.6580167503476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATACACTTCCCAATT	-9	True	NA	NA	False	AATAAA	-24	NA	9324178	9345871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_46049.known	chr19	+	1488	7	FSM	ENSG00000188321.14	ENST00000592896.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	24.6170672501823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTATAAAACACAGGCG	9	True	NA	NA	False	NA	NA	NA	9324196	9342465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9337795_9338018_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_46052.known	chr19	+	1398	6	FSM	ENSG00000188321.14	ENST00000592504.5	1398	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	17.4974283824795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATACTCATAAGGAGTA	-9	True	NA	NA	False	NA	NA	NA	9324178	9342084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101
transcript_46053.known	chr19	+	967	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	22.9904327927945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	-9	True	NA	NA	False	NA	NA	NA	9324178	9342148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_46054.known	chr19	+	2991	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	22.3839228018683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	23	False	NA	16	True	AATAAA	-18	NA	9323771	9343843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_46062.nic	chr19	+	808	2	ISM	ENSG00000188321.14	ENST00000592504.5	1398	6	-6	16638	-6	-13136	5prime_fragment	FALSE	canonical	3	48	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAAAAACAAATAC	-15	True	NA	NA	False	NA	NA	NA	9324172	9325446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_9324229_9324694
transcript_46064.known	chr19	+	2732	7	FSM	ENSG00000188321.14	ENST00000317221.11	2732	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.6731920015663	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	-9	True	NA	16	True	AATAAA	-18	NA	9324178	9343843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9324229_9324694_9324781_9337795_9337866_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_46074.known	chr19	-	3544	11	FSM	ENSG00000174652.20	ENST00000592904.7	3544	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	18.3709009033308	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCGTTCATTAGCTA	-7	True	NA	-11	True	AATAAA	-16	NA	9435573	9412428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433667_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
transcript_46076.known	chr19	-	7104	8	FSM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	8.22638859936455	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-6	True	NA	-25	True	AATAAA	-19	NA	9538645	9523222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
transcript_46078.nic	chr19	-	2548	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	1	4784	1	0	intron_retention	FALSE	canonical	3	14	junction_2	7.56453714527348	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-5	True	NA	NA	False	NA	NA	NA	9538644	9528006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_46080.known	chr19	-	2402	6	FSM	ENSG00000130818.12	ENST00000593003.5	2402	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.2889326333361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	49	False	NA	NA	False	NA	NA	NA	9538590	9528006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9536207_9536357_9538258
transcript_46081.known	chr19	+	859	2	FSM	ENSG00000278611.3	ENST00000619671.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTGGTGGTCTCTTCA	0	True	NA	11	True	AATAAA	-22	NA	9538738	9539734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9538999_9539135
transcript_46082.known	chr19	-	7177	6	FSM	ENSG00000197961.12	ENST00000586602.5	7177	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	19.1143924831526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAATTGTAATAAA	5	True	NA	-51	True	NA	NA	NA	9584497	9560352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9567110_9567647_9567706_9568094_9568176_9569001_9569083_9584185_9584349_9584460
transcript_46084.nic	chr19	-	1153	5	NIC	ENSG00000197961.12	novel	7177	6	NA	NA	-32	407	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	23.7631542519086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGTGGGAAAGCATTCA	-4	True	NA	1	True	AATAAA	-16	NA	9584536	9566252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_9567110_9567647_9567706_9568094_9568176_9569001_9569083_9584460
transcript_46087.known	chr19	-	6987	4	FSM	ENSG00000197961.12	ENST00000320451.7	6987	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.84754619472471	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-2	True	NA	-27	True	AATAAA	-17	NA	9584504	9560328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9567110_9568094_9568176_9569001_9569083_9584460
transcript_46091.nic	chr19	-	2517	7	NIC	ENSG00000171469.11	novel	659	7	NA	NA	-568	-295	combination_of_known_junctions	TRUE	canonical	3	31	junction_3	47.109800820353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGGTTGCCTGAGTCT	NA	False	NA	-12	True	ATTAAA	-21	NA	9621804	9610050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617759_9618090_9618180_9619431_9619583_9621161
transcript_46093.nic	chr19	-	1955	7	NIC	ENSG00000171469.11	novel	4529	6	NA	NA	0	-295	combination_of_known_junctions	TRUE	canonical	3	12	junction_4	52.2866033405201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGGTTGCCTGAGTCT	-15	True	NA	-12	True	ATTAAA	-21	NA	9621232	9610050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617769_9618090_9618180_9619431_9619583_9621161
transcript_46099.known	chr19	-	1031	6	FSM	ENSG00000171469.11	ENST00000444611.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	47.216098949405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAAGAATGTGGAAGAT	-17	True	NA	NA	False	CATAAA	-18	NA	9621234	9610815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9618090_9618167_9619431_9619583_9621161
transcript_46101.known	chr19	-	880	6	FSM	ENSG00000171469.11	ENST00000495503.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	51.1804650232879	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAGCAGTTCATACA	595	False	NA	NA	False	NA	NA	NA	9621195	9610936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9611337_9614020_9614104_9617048_9617172_9618090_9618180_9619431_9619583_9621161
transcript_46103.known	chr19	-	956	6	FSM	ENSG00000171469.11	ENST00000443819.5	956	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	50.9297555462423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTCACACCTAAAGCA	-14	True	NA	NA	False	NA	NA	NA	9621231	9610955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9611337_9614020_9614104_9617044_9617227_9618090_9618180_9619431_9619583_9621161
transcript_46106.known	chr19	-	4419	5	FSM	ENSG00000171469.11	ENST00000424629.5	4419	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.1977535138194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATGCATGTCTATA	9	True	NA	-12	True	AATAAA	-17	NA	9621208	9607325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9619431_9619583_9621161
transcript_46108.known	chr19	-	625	5	FSM	ENSG00000171469.11	ENST00000465974.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	54.4351678604925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATCTTGAAGTTCTCAA	-15	True	NA	NA	False	NA	NA	NA	9621232	9611105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9611337_9614020_9614104_9618090_9618180_9619431_9619583_9621161
transcript_46111.known	chr19	+	2486	5	FSM	ENSG00000267106.9	ENST00000586614.6	2486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	55.1333610439269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-1	True	NA	NA	False	NA	NA	NA	9621504	9635446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9626783_9626861_9627715_9627807_9632227_9632418_9633459
transcript_46113.known	chr19	-	583	5	FSM	ENSG00000171466.10	ENST00000587392.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCAAATTTAATCCATG	4	True	NA	NA	False	NA	NA	NA	9675052	9653707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9653882_9658008_9658136_9659378_9659468_9660719_9660875_9675014
transcript_46114.known	chr19	+	2413	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	41.4916323558806	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-19	True	NA	NA	False	NA	NA	NA	9621486	9635446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
transcript_46115.known	chr19	+	2411	4	FSM	ENSG00000267106.9	ENST00000588765.5	2411	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.6605581711837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-3	True	NA	NA	False	NA	NA	NA	9621502	9635446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9627715_9627807_9632227_9632418_9633459
transcript_46116.known	chr19	+	2337	3	FSM	ENSG00000267106.9	ENST00000585797.6	2341	3	4	0	-1	0	multi-exon	FALSE	canonical	3	90	junction_1	24	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-20	True	NA	NA	False	NA	NA	NA	9621485	9635446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9632227_9632418_9633459
transcript_46117.known	chr19	+	782	4	FSM	ENSG00000267106.9	ENST00000592851.6	785	4	3	0	-2	0	multi-exon	FALSE	canonical	3	14	junction_3	16.9901932498329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCTGAAAACAGCAGCTA	41	False	NA	NA	False	AATAAA	-16	NA	9621546	9645489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9645073
transcript_46118.known	chr19	-	2016	6	FSM	ENSG00000196605.7	ENST00000397902.6	2016	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.43739077577243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	91	False	NA	NA	False	NA	NA	NA	9768617	9757474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9768288
transcript_46123.known	chr19	-	650	2	FSM	ENSG00000196605.7	ENST00000589038.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGTCATGACTATAA	2942	False	NA	2	True	AATAAA	-22	NA	9793180	9787407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9787811_9792933
transcript_46124.known	chr19	-	1920	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	108.435336593853	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-7	True	NA	-2	True	ATTAAA	-29	NA	9819079	9810266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
transcript_46125.known	chr19	-	879	4	FSM	ENSG00000127452.9	ENST00000592067.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	10.4986771653491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTCAGCTATCTGCAG	-7	True	NA	NA	False	NA	NA	NA	9819079	9811281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818753
transcript_46130.known	chr19	-	1873	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	2.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCAGTTTATTCAT	-7	True	NA	-5	True	ATTAAA	-26	NA	9819079	9810269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818544_9818618_9818727
transcript_46131.known	chr19	-	1843	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	106.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATTCAGTTTATTCA	-4	True	NA	-6	True	ATTAAA	-25	NA	9819076	9810270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818544_9818618_9818753
transcript_46132.known	chr19	-	544	2	FSM	ENSG00000127452.9	ENST00000586469.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGCCGACCTGAGCAT	-31	True	NA	NA	False	NA	NA	NA	9819103	9811549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818727
transcript_46133.known	chr19	-	1736	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-3	True	NA	-2	True	ATTAAA	-29	NA	9818829	9810266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9811718_9818544
transcript_46135.known	chr19	+	513	5	FSM	ENSG00000198258.11	ENST00000358666.7	513	5	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	1757.41605418296	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-27	True	NA	20	True	AATAAA	-14	NA	9827891	9830115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9828065_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_46136.known	chr19	+	390	5	FSM	ENSG00000198258.11	ENST00000590068.1	390	5	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	1988.22966165883	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-25	True	NA	20	True	AATAAA	-14	NA	9827893	9830115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827944_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_46143.known	chr19	+	407	5	FSM	ENSG00000198258.11	ENST00000586895.6	407	5	0	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	464.183355474967	3119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-1	True	NA	20	True	AATAAA	-14	NA	9827917	9830115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_46144.known	chr19	+	307	3	FSM	ENSG00000198258.11	ENST00000589960.5	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1788	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-23	True	NA	20	True	AATAAA	-14	NA	9827895	9830115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828394_9829964
transcript_46145.known	chr19	+	1450	4	FSM	ENSG00000198258.11	ENST00000589372.1	1450	4	0	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	530.014045935472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	7	True	NA	-19	True	NA	NA	NA	9827925	9830076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836
transcript_46146.known	chr19	+	320	4	FSM	ENSG00000198258.11	ENST00000593087.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1937.27901965618	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTTGTTGTCTCTGT	-4	True	NA	18	True	AATAAA	-12	NA	9827914	9830113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9827985_9828326_9828390_9828836_9828875_9829964
transcript_46149.known	chr19	+	648	5	FSM	ENSG00000127445.14	ENST00000588695.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	682.261450984885	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	24	True	NA	13	True	ATTAAA	-13	NA	9835340	9849682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_4615.known	chr1	+	1448	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	136.902280386413	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	-3	True	NA	27	True	AATAAA	-24	NA	75786255	75795086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_46151.known	chr19	+	536	5	FSM	ENSG00000127445.14	ENST00000589058.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	886.777311392212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCTCGGGGCAGGGC	52	False	NA	NA	False	NA	NA	NA	9835368	9849214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089
transcript_46152.known	chr19	+	1009	4	FSM	ENSG00000127445.14	ENST00000247970.9	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	1792	junction_3	45.3725320724628	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCTCATTTCTC	1	True	NA	20	True	ATTAAA	-20	NA	9835317	9849689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089
transcript_46153.nic	chr19	+	1122	2	ISM	ENSG00000127445.14	ENST00000587625.5	878	3	-46	9183	20	2706	5prime_fragment	FALSE	canonical	3	1884	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGTAGTGAGTGCCAGT	7358	False	NA	NA	False	NA	NA	NA	9835276	9839431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_9835403_9838435
transcript_46154.known	chr19	-	6207	67	FSM	ENSG00000080573.7	ENST00000264828.4	6207	67	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.94136881880815	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	-3	True	NA	-2	True	AATAAA	-14	NA	10010504	9959560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_9960558_9960650_9960891_9962818_9962888_9966313_9966427_9966535_9966747_9967346_9967401_9967903_9967940_9968025_9968080_9968384_9968493_9968674_9968729_9969348_9969403_9969574_9969683_9969868_9969923_9970621_9970676_9970974_9971029_9971204_9971259_9972918_9973027_9973569_9973624_9973755_9973810_9973918_9973973_9974170_9974225_9974300_9974409_9976557_9976612_9977228_9977283_9977364_9977473_9977593_9977702_9978573_9978628_9978890_9978981_9979131_9979240_9979363_9979418_9979838_9979893_9979993_9980048_9980647_9980693_9980805_9980860_9981087_9981133_9982064_9982119_9985841_9985896_9986314_9986423_9986552_9986607_9986713_9986759_9989123_9989178_9989321_9989367_9989468_9989523_9991609_9991655_9991787_9991842_9992003_9992049_9992826_9992881_9993022_9993068_9993379_9993434_9993618_9993673_9993752_9993807_9995563_9995618_9996065_9996120_9996205_9996263_9996432_9996517_9996614_9996690_9997370_9997434_9997983_9998026_9998101_9998150_10001523_10001671_10001767_10001882_10003564_10003715_10004040_10004146_10005557_10005715_10005795_10005986_10006072_10006232_10010297
transcript_46155.nnic	chr19	-	1470	4	NIC	ENSG00000080573.7	novel	6207	67	NA	NA	2188	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	8.28653526310404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	1974	False	NA	-2	True	AATAAA	-14	NA	9966699	9959560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_9960558_9960650_9960891_9962818_9962888_9966535
transcript_46159.known	chr19	+	1928	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	39.8241030492021	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	-15	True	NA	15	True	AATAAA	-17	NA	10086316	10093243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
transcript_46161.known	chr19	+	1481	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	66.2635430901272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCCCTGGCCCCCCAA	8	True	NA	NA	False	AATACA	-33	NA	10086339	10092927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
transcript_46163.known	chr19	+	2079	7	FSM	ENSG00000130813.18	ENST00000585919.5	2079	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	18.1605494287908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCGTCTTACCTACCC	137	False	NA	24	True	AATAAA	-26	NA	10086296	10093252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091631_10092069
transcript_46168.known	chr19	+	2302	12	FSM	ENSG00000130810.20	ENST00000253107.12	2302	12	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_7	68.2340406067284	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATCACTTAAAC	8	True	NA	54	True	NA	NA	NA	10106361	10112012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10106413_10106500_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_46180.known	chr19	-	1103	11	FSM	ENSG00000130811.12	ENST00000253108.9	1103	11	0	0	0	0	multi-exon	FALSE	canonical	3	1728	junction_5	136.4	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTCTTTTTGTTCTTG	8	True	NA	-5	True	AATAAA	-19	NA	10119899	10115013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116075_10116799_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_46193.nic	chr19	-	1855	10	NIC	ENSG00000130811.12	novel	1103	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1728	junction_4	136.701169989665	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTTGGTTCTTTTTGTT	NA	False	NA	-9	True	AATAAA	-15	NA	10119930	10115017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_46202.known	chr19	-	537	6	FSM	ENSG00000130811.12	ENST00000587681.5	537	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	796.606904313539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGACCTC	-1	True	NA	NA	False	NA	NA	NA	10119908	10118369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_46205.known	chr19	+	1575	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_6	71.4016806524888	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCCCTTCCACTC	15	False	NA	6	True	CATAAA	-8	NA	10106418	10111254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_46206.known	chr19	-	1034	4	FSM	ENSG00000130811.12	ENST00000590158.1	1034	4	0	0	0	0	multi-exon	FALSE	canonical	3	1890	junction_3	32.7651576458218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAGAGCGCGGGCTCCAA	3219	False	NA	-53	True	NA	NA	NA	10116688	10115061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966
transcript_46207.known	chr19	-	762	5	FSM	ENSG00000130811.12	ENST00000590940.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	885.416109803747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTCTTTTAATTTTTT	207	False	NA	70	True	AATAAA	-37	NA	10119700	10118075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653
transcript_46210.known	chr19	+	1218	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_8	72.1819532501026	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTCAGTGTCATT	-21	True	NA	18	True	AATAAA	-28	NA	10252213	10260055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
transcript_46211.known	chr19	+	1423	8	FSM	ENSG00000105364.14	ENST00000590669.5	1423	8	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_4	58.4706449984145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	41	True	NA	NA	False	NA	NA	NA	10252009	10259125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608
transcript_46216.known	chr19	+	2967	7	FSM	ENSG00000090339.9	ENST00000264832.8	2967	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	6.92017983067556	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	4	True	NA	4	True	AATAAA	-16	NA	10271119	10286615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782_10285029_10285114
transcript_46218.known	chr19	+	1290	3	FSM	ENSG00000105371.10	ENST00000380770.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCCTGTGACCTAA	-1	True	NA	30	True	AATAAA	-15	NA	10286954	10288520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10287407_10287535_10287839_10287985
transcript_46223.known	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_4	44.4575327950419	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	5	True	NA	-1	True	AATAAA	-18	NA	10339624	10333775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
transcript_46224.nnic	chr19	-	1670	6	NIC	ENSG00000076662.10	novel	1735	7	NA	NA	-186	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	47.9357903867246	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	NA	False	NA	-1	True	AATAAA	-18	NA	10339847	10333775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10334060_10334159_10334409_10334527_10334783_10335670_10335977_10338681_10338949_10339538
transcript_46226.nic	chr19	-	814	5	NIC	ENSG00000267673.6	novel	1012	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	48	junction_1	175.20131278047	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-19	True	NA	-7	True	AATAAA	-13	NA	10316026	10310216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10310606_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_46229.known	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_4	122.427529583832	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-8	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_46230.nic	chr19	-	912	5	NIC	ENSG00000267673.6	novel	1012	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	26	junction_3	207.171879124557	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-19	True	NA	-7	True	AATAAA	-13	NA	10316026	10310216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704_10315760_10315851
transcript_46234.known	chr19	+	2813	1	FSM	ENSG00000274425.1	ENST00000612689.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTTTATGACTATGAT	158	False	NA	11	True	AATAAA	-22	NA	10333435	10336248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10333400_10336200
transcript_46235.known	chr19	-	773	4	FSM	ENSG00000267673.6	ENST00000492239.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	231.357347456748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	1303	False	NA	-7	True	AATAAA	-13	NA	10315795	10310216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704
transcript_46238.nnic	chr19	-	959	5	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	144	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	29.2361078120874	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	310	False	NA	-11	True	AATAAA	-16	NA	10353934	10350532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353813
transcript_46241.nnic	chr19	-	783	4	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	147	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	33.1360830515618	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-17	True	NA	-11	True	AATAAA	-16	NA	10353931	10350532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10353813
transcript_46244.nnic	chr19	-	1266	3	NIC	ENSG00000105397.14	novel	3456	21	NA	NA	-388	0	intron_retention	FALSE	canonical	3	9	junction_2	37	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	9	True	NA	-11	True	AATAAA	-16	NA	10353644	10350532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10350969_10351051_10351163_10352925
transcript_46245.nnic	chr19	-	647	3	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	165	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	39	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	1	True	NA	-11	True	AATAAA	-16	NA	10353913	10350532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10350969_10351051_10351163_10353813
transcript_46246.nic	chr19	-	671	2	ISM	ENSG00000105397.14	ENST00000530560.5	558	4	2337	-215	-173	0	3prime_fragment	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	NA	False	NA	-11	True	AATAAA	-16	NA	10354276	10350532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_10350969_10354041
transcript_46247.known	chr19	-	767	2	FSM	ENSG00000105397.14	ENST00000530220.1	767	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-1	True	NA	-11	True	AATAAA	-16	NA	10353256	10350532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10350969_10352925
transcript_46253.known	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_5	125.502093648688	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-11	True	NA	-29	True	AATAAA	-16	NA	10403542	10391132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
transcript_46254.known	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	69.9795605079718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	1	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
transcript_46256.known	chr19	-	2648	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	105.129253778385	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTCTGGGCTGGAG	827	False	NA	-8	True	AATAAA	-24	NA	10502896	10486125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_46258.known	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	209.645033330151	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-9	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
transcript_46265.known	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	28.2958357534754	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10	True	NA	-11	True	AATAAA	-24	NA	10566026	10553084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_46268.known	chr19	-	2545	18	FSM	ENSG00000129347.21	ENST00000478863.5	2545	18	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	24.6817809612411	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	3056	False	NA	NA	False	NA	NA	NA	10565971	10553575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_46272.known	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_6	269.205841548743	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-36	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
transcript_46277.nic	chr19	+	2893	23	NIC	ENSG00000129353.15	novel	3784	22	NA	NA	-6	-218	combination_of_known_junctions	FALSE	canonical	3	71	junction_22	246.570464171305	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTCTGTCTCAACAGC	-26	True	NA	34	True	ATTAAA	-17	NA	10625513	10643912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
transcript_46281.known	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	161.216309388034	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	30	True	NA	18	True	AATAAA	-12	NA	10602509	10644550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_46284.known	chr19	+	3784	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_21	179.389301637389	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	-15	True	NA	25	True	AATAAA	-19	NA	10625524	10644557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_46286.known	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	119.205932829573	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	13	True	NA	25	True	AATAAA	-19	NA	10625552	10644557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_463.known	chr1	+	1138	5	FSM	ENSG00000225077.3	ENST00000441724.1	1138	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.41740410091868	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGACTGTTGCCACTCG	NA	False	NA	NA	False	NA	NA	NA	6236239	6238940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6236337_6236965_6237151_6237244_6237346_6237813_6237849_6238220
transcript_46300.nnic	chr19	-	1550	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-23	-6	multi-exon	FALSE	canonical	2	11	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCAGTCTCTCTGGTCCT	-9	True	NA	-9	True	AATAAA	-15	NA	10653867	10651867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr19_-_10653269_10653718
transcript_46302.nnic	chr19	-	875	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-23	-681	multi-exon	FALSE	canonical	2	11	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCGCCAGGTGTGGTG	-9	True	NA	NA	False	NA	NA	NA	10653867	10652542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr19_-_10653269_10653718
transcript_46303.known	chr19	-	1983	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	14	True	NA	-3	True	AATAAA	-21	NA	10653844	10651861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10651900_10653800
transcript_46304.known	chr19	+	6119	20	FSM	ENSG00000129351.17	ENST00000449870.5	6119	20	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_18	443.170021086747	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	NA	False	NA	34	True	AATAAA	-35	NA	10654260	10692417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_46311.known	chr19	+	3671	18	FSM	ENSG00000129351.17	ENST00000407004.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_13	258.947162985025	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	-27	True	NA	40	True	AATACA	-15	NA	10654327	10685765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_46313.known	chr19	+	2622	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_13	202.490958403812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAAAGCCCACCTTTG	6	True	NA	-66	True	NA	NA	NA	10654360	10684761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_46314.nic	chr19	+	3714	18	NIC	ENSG00000129351.17	novel	2697	19	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	345.79560736962	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	393	False	NA	40	True	AATACA	-15	NA	10654920	10685765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_46315.nic	chr19	+	3702	18	NIC	ENSG00000129351.17	novel	3035	17	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	308.080001293871	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	393	False	NA	40	True	AATACA	-15	NA	10654920	10685765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_46323.nic	chr19	+	1426	11	ISM	ENSG00000129351.17	ENST00000589998.5	2622	18	-52	3455	5	0	5prime_fragment	FALSE	canonical	3	1124	junction_1	158.532804176297	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	11	True	NA	1	True	NA	NA	NA	10654308	10681306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_46325.nic	chr19	+	1534	11	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	345.163743750701	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	309	False	NA	1	True	NA	NA	NA	10654836	10681306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_46326.nic	chr19	+	1526	11	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	427.778926549684	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	341	False	NA	1	True	NA	NA	NA	10654868	10681306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10655148_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_46331.nic	chr19	+	1270	10	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	107	junction_8	559.504895773989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	-2	True	NA	1	True	NA	NA	NA	10655002	10681306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10681018_10681131_10681218
transcript_46339.known	chr19	+	1329	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_6	37.9749755158854	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	-8	True	NA	26	True	NA	NA	NA	10701438	10713365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
transcript_46345.known	chr19	+	1571	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	29.5074143225055	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	NA	False	NA	6	True	GGGGCT	-31	NA	10701429	10713345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
transcript_46355.known	chr19	+	540	3	FSM	ENSG00000213339.9	ENST00000587500.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTGTGTCTGTGTCTT	NA	False	NA	25	True	NA	NA	NA	10712662	10713364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_10712868_10712952_10713041_10713117
transcript_46358.nnic	chr19	-	1211	4	NNC	ENSG00000099203.7	novel	1633	4	NA	NA	17	249	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	122.366480522877	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCCTGCTGATTGGGG	2967	False	NA	-1	True	AATAAA	-18	NA	10835615	10832437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_10833214_10834933_10835118_10835255_10835354_10835462
transcript_46359.known	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	8.80656320908194	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-5	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
transcript_46361.known	chr19	-	2111	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	32.4379750018743	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	-2	True	NA	-19	True	AATAAA	-14	NA	10928639	10922192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_46362.known	chr19	-	2087	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_9	88.7311099701971	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	17	False	NA	-11	True	AATAAA	-22	NA	10928681	10922184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
transcript_46370.nic	chr19	-	1306	10	NIC	ENSG00000130733.11	novel	2111	10	NA	NA	-5	63	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	94.9394869000223	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGATTCAGAGAATTTATA	-25	True	NA	-4	True	NA	NA	NA	10928662	10923037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_10923192_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_46380.known	chr19	+	5173	18	FSM	ENSG00000130164.14	ENST00000558518.6	5173	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_4	36.0341053365398	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAAACTCGATGCAC	0	True	NA	19	True	ATTAAA	-18	NA	11089462	11133820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_46385.nic	chr19	+	1687	7	ISM	ENSG00000130164.14	ENST00000557933.5	2941	18	-52	20266	-52	-2222	5prime_fragment	FALSE	canonical	3	218	junction_4	46.809602528636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	11089409	11111259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651
transcript_46386.known	chr19	-	833	5	FSM	ENSG00000161888.12	ENST00000592967.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.6484977572217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAGAAGGCAGAGG	9151	False	NA	NA	False	AAAAAG	-40	NA	11155765	11146021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11146431_11147869_11147895_11148012_11148118_11149093_11149239_11155616
transcript_46388.known	chr19	-	2315	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-26	1	-1	-1	multi-exon	FALSE	canonical	3	8	junction_1	9.86154146165801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	9108	False	NA	-15	True	AATAAA	-22	NA	11155808	11145493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_46389.known	chr19	-	699	4	FSM	ENSG00000161888.12	ENST00000585486.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6.97614984548545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGGCCAAGTGTGGTAC	9147	False	NA	NA	False	AATAAA	-13	NA	11155769	11147598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11147895_11148012_11148118_11149093_11149239_11155616
transcript_46390.known	chr19	-	832	5	FSM	ENSG00000161888.12	ENST00000591396.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.3970762682174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGCCTGGTGTGGTG	9152	False	NA	-39	True	ATTAAA	-1	NA	11155764	11145922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11146280_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_46392.known	chr19	+	1049	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.4621977685614	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	-5	True	NA	8	True	AATAAA	-21	NA	11346518	11354944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
transcript_46403.known	chr19	-	628	4	FSM	ENSG00000105518.14	ENST00000591677.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	340.165972561761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGCACCACAGCTGCCAT	185	False	NA	NA	False	NA	NA	NA	11346305	11343063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346007
transcript_46404.known	chr19	-	792	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	134.127634073752	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-18	True	NA	-2	True	AATAAA	-17	NA	11346300	11342775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
transcript_46406.known	chr19	-	677	4	FSM	ENSG00000105518.14	ENST00000586590.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	310.494587535578	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346207
transcript_46407.known	chr19	-	1003	4	FSM	ENSG00000105518.14	ENST00000586956.5	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	346.760243780435	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-3	True	NA	-4	True	AATAAA	-15	NA	11346285	11342777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346007
transcript_46408.known	chr19	-	840	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	289.304145993259	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGGCTGCTGTCTT	-7	True	NA	-11	True	AATAAA	-8	NA	11346248	11342784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
transcript_46410.known	chr19	-	788	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	342.992063400242	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	11	True	NA	-5	True	AATAAA	-14	NA	11346271	11342778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
transcript_46416.known	chr19	-	593	3	FSM	ENSG00000105518.14	ENST00000586218.5	593	3	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_2	355.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-2	True	NA	-2	True	AATAAA	-17	NA	11346210	11342775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11346126
transcript_46418.known	chr19	-	1310	2	FSM	ENSG00000105518.14	ENST00000588321.1	1310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGCATGCTAATAAATG	234	False	NA	-36	True	NA	NA	NA	11346256	11342809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343101_11345237
transcript_46419.known	chr19	-	1256	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_1	17	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519
transcript_46420.known	chr19	-	688	4	FSM	ENSG00000105518.14	ENST00000587948.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	349.586422314521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	84	False	NA	-5	True	AATAAA	-14	NA	11346406	11342778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346333
transcript_46421.known	chr19	-	682	3	FSM	ENSG00000267277.2	ENST00000590399.2	687	3	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAGACGGGGGTCTCA	-14	True	NA	NA	False	AATATA	-16	NA	11374935	11368122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11368296_11371687_11371872_11374610
transcript_46423.known	chr19	+	1662	2	FSM	ENSG00000173928.4	ENST00000312423.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32	False	NA	NA	False	NA	NA	NA	11374706	11376951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11374930_11375512
transcript_46427.known	chr19	-	2511	19	FSM	ENSG00000205517.13	ENST00000380456.8	2511	19	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_18	33.2357831854557	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	-1	True	NA	-5	True	NA	NA	NA	11419314	11394059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_46436.known	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	18.5736262435943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-1	True	NA	-29	True	AATAAA	-17	NA	11384314	11377206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_4644.known	chr1	+	2137	10	FSM	ENSG00000137955.16	ENST00000471759.5	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	191.599376271569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	12	False	NA	12	True	AATAAA	-26	NA	75786700	75794803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_46440.known	chr19	-	771	3	FSM	ENSG00000205517.13	ENST00000568420.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGCCGAGGCAGG	8	True	NA	NA	False	NA	NA	NA	11419305	11416462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11417060_11418670_11418785_11419245
transcript_46441.nic	chr19	-	1130	2	ISM	ENSG00000187266.14	ENST00000588681.5	2133	8	-12	4602	-12	-1481	5prime_fragment	FALSE	canonical	3	80	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCAGGCGTGGCGCGTG	-10	True	NA	NA	False	NA	NA	NA	11384354	11382364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_11383233_11384092
transcript_46456.nic	chr19	+	2102	18	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	536	junction_11	160.913030734641	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	205	False	NA	28	True	AATAAA	-19	NA	11435607	11450968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_46459.known	chr19	+	2096	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_11	200.409805063021	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	-9	True	NA	28	True	AATAAA	-19	NA	11435634	11450968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_46462.known	chr19	+	2063	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	236.682331304128	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	-9	True	NA	25	True	AATAAA	-16	NA	11435634	11450965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_4647.known	chr1	+	6836	5	FSM	ENSG00000184005.11	ENST00000328299.4	6836	5	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	7.22841614740048	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGGCATATTTCAGTT	15	True	NA	20	True	AATAAA	-20	NA	76074745	76634603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_76074885_76313804_76314000_76412007_76412418_76627451_76627560_76628619
transcript_46494.known	chr19	-	1647	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	31.5588210120953	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	3	True	NA	-13	True	AATAAA	-31	NA	11529134	11505928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_465.known	chr1	-	524	5	FSM	ENSG00000116251.11	ENST00000471204.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2938.76159078956	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAAGACGAGGATTAA	149	False	NA	NA	False	NA	NA	NA	6209244	6186691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6208680_6208740_6209134
transcript_4650.known	chr1	-	4601	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_7	35.0279888089511	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGTGGCAGTGTC	-12	True	NA	-9	True	ATTAAA	-18	NA	77219430	77088988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
transcript_46501.nic	chr19	-	1549	7	FSM	ENSG00000130159.15	ENST00000585318.6	1510	7	-23	-16	-1	0	multi-exon	FALSE	canonical	3	20	junction_6	98.2847337529532	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-18	True	NA	-13	True	AATAAA	-31	NA	11529155	11505928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11529061
transcript_46503.known	chr19	-	1501	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	102.335640582025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	0	True	NA	-13	True	AATAAA	-31	NA	11529137	11505928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_46504.known	chr19	-	970	6	FSM	ENSG00000130159.15	ENST00000417981.6	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	104.803435058208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATCTGCAGGCGCCT	6945	False	NA	-86	True	NA	NA	NA	11529172	11506001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11519074_11519194_11529061
transcript_46505.known	chr19	-	1286	6	FSM	ENSG00000130159.15	ENST00000592312.5	1286	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	104.91787264332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCACCCGGGAGCT	13	True	NA	NA	False	NA	NA	NA	11529124	11506300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507701_11508049_11513055_11513280_11513803_11514222_11529061
transcript_46508.known	chr19	-	818	5	FSM	ENSG00000130159.15	ENST00000588998.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	143.012237238636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	6	True	NA	-13	True	AATAAA	-31	NA	11529096	11505928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11519074_11519194_11529061
transcript_46510.known	chr19	+	1499	7	FSM	ENSG00000130176.8	ENST00000252456.7	1499	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	12.5565388012249	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	-1	True	NA	16	True	AATAAA	-16	NA	11538850	11550323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11538991_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_46511.nic	chr19	+	1512	7	NIC	ENSG00000130176.8	novel	565	5	NA	NA	-25	0	intron_retention	FALSE	canonical	3	24	junction_1	37.5396087116291	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	1017	False	NA	16	True	AATAAA	-16	NA	11539868	11550323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_11540022_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_46514.known	chr19	-	585	5	FSM	ENSG00000130165.10	ENST00000590700.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	364.158619285607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTAGTGGGTGTGCG	10	True	NA	NA	False	NA	NA	NA	11559223	11553590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11554819_11554947_11559190
transcript_46517.nnic	chr19	-	1119	5	NIC	ENSG00000130165.10	novel	1172	5	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	349.287399572329	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTGTCCGTGATG	9175	False	NA	-17	True	AATAAA	-14	NA	11559260	11553046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_11553811_11554010_11554082_11554231_11554366_11555173_11555254_11559190
transcript_46520.known	chr19	-	743	4	FSM	ENSG00000130165.10	ENST00000589171.5	743	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	360.871476044065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTGATCTCACTTGGC	9290	False	NA	NA	False	NA	NA	NA	11559145	11553456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11553816_11554010_11554082_11554231_11554366_11558966
transcript_46521.known	chr19	-	1019	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_3	78.661016746261	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	-3	True	NA	-13	True	AATAAA	-18	NA	11559236	11553042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
transcript_46524.known	chr19	-	2154	4	FSM	ENSG00000130165.10	ENST00000586683.5	2154	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	326.794872800797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCTTACTGTCCCCAT	3	True	NA	NA	False	ATTAAA	-45	NA	11559230	11551146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11553056_11554010_11554082_11554231_11554366_11559190
transcript_46527.known	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	8.09835374217089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1751	False	NA	-6	True	AATAAA	-22	NA	11578985	11574659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
transcript_46528.nic	chr19	-	1623	6	ISM	ENSG00000102575.13	ENST00000218758.9	1630	7	193	0	131	0	3prime_fragment	FALSE	canonical	3	18	junction_2	6.41872261435249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-10	True	NA	-6	True	AATAAA	-22	NA	11578792	11574659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584
transcript_46529.known	chr19	-	1527	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	9.55824251627882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	1750	False	NA	-37	True	NA	NA	NA	11578986	11574690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
transcript_46530.known	chr19	+	591	5	FSM	ENSG00000198551.10	ENST00000587939.5	591	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	33.2302572966265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACAAGAAAACTCCTGG	-8	True	NA	NA	False	AAGAAA	-27	NA	11597461	11616773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11597631_11604209_11604365_11614526_11614654_11614826_11614888_11616694
transcript_46531.known	chr19	+	2803	4	FSM	ENSG00000198551.10	ENST00000361113.10	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	4.54606056566195	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGCTCAGAAGAATTT	13	True	NA	40	True	CATAAA	-23	NA	11597482	11619161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616694
transcript_46532.known	chr19	+	2755	4	FSM	ENSG00000198551.10	ENST00000588174.1	2755	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.5095342982992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACAAACCATAAAGGACT	13	True	NA	3	True	AATAAA	-18	NA	11597482	11619124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616705
transcript_46533.known	chr19	-	2396	4	FSM	ENSG00000197933.13	ENST00000341191.11	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.88561808316413	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCTTTTGTTTTGTG	-10	True	NA	-3	True	ATTAAA	-18	NA	11738946	11721264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_11723343_11724193_11724255_11725200_11725328_11738816
transcript_46535.known	chr19	+	920	4	FSM	ENSG00000171295.13	ENST00000427505.5	920	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCGTAGACATGAAAG	66	False	NA	NA	False	NA	NA	NA	11814343	11831983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11814451_11830273_11830410_11830616_11830678_11831367
transcript_46538.known	chr19	+	569	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	16	True	NA	NA	False	NA	NA	NA	11887817	11904902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
transcript_46540.known	chr19	+	2441	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.98887651569859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAACCACAAAGAT	-20	True	NA	NA	False	NA	NA	NA	11887781	11906696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
transcript_46543.known	chr19	+	2843	4	FSM	ENSG00000196757.8	ENST00000254321.10	2843	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3.68178700572909	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	-2	True	NA	23	True	AATAAA	-25	NA	11925106	11950763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11925274_11947180_11947308_11947513_11947575_11948275
transcript_46544.known	chr19	+	2621	4	FSM	ENSG00000197054.12	ENST00000343949.9	2621	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6	True	NA	NA	False	NA	NA	NA	11965053	11980381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11965212_11977028_11977165_11977370_11977432_11978115
transcript_46546.known	chr19	-	2405	6	FSM	ENSG00000197647.13	ENST00000548669.2	2405	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.7184904764677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	3	True	NA	-4	True	AATAAA	-29	NA	12035696	12014715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12030139_12030199_12034827_12034875_12035536
transcript_46553.known	chr19	-	2338	5	FSM	ENSG00000197647.13	ENST00000419886.7	2338	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.5974135047432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	11	True	NA	-4	True	AATAAA	-29	NA	12035688	12014715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12034827_12034875_12035536
transcript_46556.known	chr19	+	523	4	FSM	ENSG00000219665.8	ENST00000589551.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	49.7348525237137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGAATCGCTTGAAC	75	False	NA	NA	False	NA	NA	NA	11987766	12003595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11987824_11990168_11990382_12001773_12001823_12003391
transcript_46558.nnic	chr19	+	803	4	NNC	ENSG00000219665.8	novel	622	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	50.3388517946129	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	0	True	NA	5	True	AATAAA	-20	NA	11987616	12003811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_11987824_12001129_12001257_12001773_12001823_12003391
transcript_46559.known	chr19	+	6588	4	FSM	ENSG00000223547.10	ENST00000439326.8	6588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCCAAGTTATTGG	1	True	NA	13	True	ATTAAA	-22	NA	12064730	12081565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12064877_12074030_12074158_12074360_12074422_12075311
transcript_46561.known	chr19	+	686	4	FSM	ENSG00000214189.9	ENST00000596883.2	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	36.8510515453766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCGCCTCAGAACTTCA	85	False	NA	NA	False	NA	NA	NA	12092386	12111660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12092471_12093835_12093896_12110304_12110432_12111245
transcript_46566.known	chr19	+	1994	4	FSM	ENSG00000214189.9	ENST00000430298.7	1994	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	41.4835978296108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAATGTAAACAGTGT	166	False	NA	NA	False	NA	NA	NA	12092467	12113048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12092471_12110304_12110432_12110633_12110695_12111245
transcript_46568.known	chr19	-	2282	4	FSM	ENSG00000197647.13	ENST00000550507.7	2283	4	0	1	0	0	multi-exon	FALSE	canonical	2	5	junction_3	10.6770782520313	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	20	True	NA	-4	True	AATAAA	-29	NA	12035679	12014715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12035536
transcript_46569.known	chr19	-	2322	4	FSM	ENSG00000197647.13	ENST00000344980.11	2322	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.5521135891752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-11	True	NA	-4	True	AATAAA	-29	NA	12035710	12014715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12016667_12017875_12017937_12018165_12018302_12035536
transcript_4657.known	chr1	+	555	1	FSM	ENSG00000226084.5	ENST00000471722.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	41	False	NA	NA	False	AAGAAA	-34	NA	77129113	77129668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77129100_77129700
transcript_46572.known	chr19	-	1756	4	FSM	ENSG00000257446.4	ENST00000547628.2	1756	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATGGATGTAAGCA	7	True	NA	NA	False	NA	NA	NA	12052961	12043804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12045210_12046367_12046429_12046633_12046761_12052798
transcript_46576.known	chr19	-	642	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	9.46337971105226	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGTACAGAAACCT	3623	False	NA	NA	False	GATAAA	-30	NA	12140315	12133667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
transcript_46577.known	chr19	-	3004	4	FSM	ENSG00000132010.16	ENST00000334213.10	3004	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	3.39934634239519	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTATGTTTGCAATT	-3	True	NA	NA	False	ATTAAA	-31	NA	12140350	12131349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179
transcript_46580.known	chr19	+	622	3	FSM	ENSG00000219665.8	ENST00000489336.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	3.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	20	False	NA	5	True	AATAAA	-20	NA	11987670	12003811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_11987824_12001773_12001823_12003391
transcript_46582.nic	chr19	+	2936	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-1	797	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	22.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTCATCTGTAGCCAA	-5	True	NA	9	True	ATTAAA	-22	NA	12092261	12113845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_46583.nic	chr19	+	3489	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-1	1350	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	22.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTATTTCAGATATTA	-5	True	NA	7	True	ATTAAA	-18	NA	12092261	12114398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_46585.nic	chr19	+	3769	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-1	1630	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	22.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAATTTTGAGTGTTT	-5	True	NA	-43	True	AAAAAG	-15	NA	12092261	12114678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_46589.known	chr19	+	3601	4	FSM	ENSG00000196646.12	ENST00000343979.6	3601	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	8.2192186706253	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTCATGGATTGTG	10	True	NA	3	True	AATAAA	-14	NA	12163095	12189871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12163207_12185784_12185912_12186113_12186175_12186569
transcript_4659.known	chr1	-	6412	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	71.3748726722478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	1	True	NA	-5	True	TATAAA	-19	NA	77682658	77562415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
transcript_46592.known	chr19	-	2780	5	FSM	ENSG00000197857.15	ENST00000356109.10	2780	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	11.0312057364551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	0	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12293231_12293376_12294691
transcript_46593.known	chr19	-	2636	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	0	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
transcript_46596.nic	chr19	-	1455	5	NIC	ENSG00000188868.14	novel	958	5	NA	NA	2	659	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	5.30919014539883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTATAAATGTAAATGTGG	-4	True	NA	NA	False	AATAAA	-18	NA	12333718	12318519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_12319312_12319429_12319666_12321271_12321333_12322584_12322712_12333479
transcript_46597.known	chr19	-	958	5	FSM	ENSG00000188868.14	ENST00000595977.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4.74341649025257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACATGTAAACAGTGT	-6	True	NA	NA	False	NA	NA	NA	12333720	12319186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12319312_12319429_12319834_12321271_12321333_12322584_12322712_12333479
transcript_46598.known	chr19	-	2699	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAAGACATA	0	True	NA	NA	False	AAAACA	-33	NA	12333633	12317476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
transcript_46601.nic	chr19	-	2282	4	NIC	ENSG00000198342.10	novel	6274	6	NA	NA	1	208	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.55902608401044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGTGTTGTAAAAGCT	-7	True	NA	-19	True	AATAAA	-19	NA	12365682	12349374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_12351319_12352009_12352071_12352987_12353115_12365532
transcript_46602.known	chr19	-	1906	3	FSM	ENSG00000198342.10	ENST00000438182.5	1906	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATCCCCTAACCATATG	0	True	NA	NA	False	NA	NA	NA	12365641	12349582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12351319_12352009_12352071_12365532
transcript_46604.known	chr19	+	576	5	FSM	ENSG00000173875.14	ENST00000597691.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	32.7595405950694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGCCGGAGTAAAACC	-8	True	NA	NA	False	NA	NA	NA	12610919	12627805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12611083_12612225_12612366_12623699_12623827_12624649_12624711_12627720
transcript_46607.known	chr19	+	6465	4	FSM	ENSG00000173875.14	ENST00000343325.9	6465	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	6.68331255192114	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATATGGGAGTTTGTT	-8	True	NA	NA	False	AGTAAA	-21	NA	12610919	12633834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12611083_12623699_12623827_12624649_12624711_12627720
transcript_46609.known	chr19	-	2583	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-7	True	NA	-1	True	ATTAAA	-22	NA	12401271	12390015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
transcript_4661.nic	chr1	-	4266	14	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	95.0081279612341	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAATGCTTGTTGTGACT	-9	True	NA	-31	True	AATAAA	-27	NA	77682668	77564505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641521_77641656_77682584
transcript_46610.known	chr19	-	2573	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	2.16024689946929	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTCTTCTGTTTAATG	0	True	NA	NA	False	ATTAAA	-22	NA	12441021	12429705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
transcript_46612.known	chr19	-	2885	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3.29983164553722	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGCATTTCCATTTCT	-21	True	NA	NA	False	ATTAAA	-17	NA	12551482	12525372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
transcript_46613.known	chr19	+	294	2	FSM	ENSG00000173875.14	ENST00000498389.1	294	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGCTTCCTTCCTTTA	2	True	NA	NA	False	NA	NA	NA	12610957	12612394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12611083_12612225
transcript_46615.known	chr19	+	1425	11	FSM	ENSG00000123154.12	ENST00000548381.5	1425	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	62.1147325519478	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCAGTCCTCGTTCT	-13	True	NA	14	True	AATAAA	-33	NA	12666813	12675831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_46618.known	chr19	+	1450	11	FSM	ENSG00000123154.12	ENST00000418543.8	1450	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	42.2842760373168	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCAGTCCTCGTTCTT	-20	True	NA	15	True	AATAAA	-34	NA	12666806	12675832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670098_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_46627.nic	chr19	+	1358	9	ISM	ENSG00000123154.12	ENST00000418543.8	1450	11	2734	0	-12	0	3prime_fragment	FALSE	canonical	3	141	junction_1	21.873214212822	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCAGTCCTCGTTCTT	2714	False	NA	15	True	AATAAA	-34	NA	12669540	12675832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_12669894_12669976_12670098_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_46635.known	chr19	-	1172	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	128.243664560866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	689	False	NA	-28	True	NA	NA	NA	12681206	12675742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
transcript_46638.known	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	53.9801757592544	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	15	False	12681895	-2	True	NA	NA	NA	12681880	12675716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_46646.known	chr19	-	1090	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	129.978020119887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	124	False	NA	-7	True	NA	NA	NA	12681771	12675721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_46656.known	chr19	-	1176	8	FSM	ENSG00000095059.17	ENST00000601537.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	128.969384122032	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGCTACGTCTCTAGAA	4	True	NA	-47	True	NA	NA	NA	12681860	12675761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676143_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_4667.known	chr1	-	587	5	FSM	ENSG00000036549.13	ENST00000463166.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	25.3019268040993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAACGGCTTGGATGAA	3	True	NA	NA	False	NA	NA	NA	77683403	77633311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
transcript_46676.known	chr19	-	3185	24	FSM	ENSG00000104774.13	ENST00000456935.7	3185	24	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_17	38.1150878837454	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCTCTGTGACTGAGTG	-15	True	NA	-18	True	ATTAAA	-20	NA	12666742	12646511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658511_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
transcript_46677.known	chr19	-	599	4	FSM	ENSG00000105583.11	ENST00000222190.9	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	837.778544060952	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCAGCCTCTTCTGT	13	True	NA	-22	True	AATAAA	-12	NA	12669403	12668074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12668426_12668519_12668612_12669127_12669234_12669353
transcript_46678.known	chr19	-	553	5	FSM	ENSG00000095059.17	ENST00000598246.5	553	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	172.312760699839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	2375	False	NA	-2	True	NA	NA	NA	12679520	12675716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12675934_12676016_12676079_12677107_12677212_12677290_12677397_12679456
transcript_46679.known	chr19	-	1727	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	16.0030861221234	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	0	True	NA	-6	True	AATAAA	-22	NA	12696631	12688915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
transcript_46682.nic	chr19	-	1585	9	NIC	ENSG00000132004.13	novel	1727	10	NA	NA	2	0	intron_retention	FALSE	canonical	2	8	junction_8	49.0407993409569	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	2	True	NA	-6	True	AATAAA	-22	NA	12696629	12688915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12696172
transcript_4669.known	chr1	-	420	2	FSM	ENSG00000036549.13	ENST00000458763.2	420	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATTCTGTTTGTTTAG	-16	True	NA	NA	False	AATAAA	-9	NA	77682675	77676981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77677311_77682584
transcript_46695.known	chr19	-	879	3	FSM	ENSG00000123144.11	ENST00000242784.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_2	570.5	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12	True	NA	-7	True	AGTAAA	-21	NA	12734684	12730639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12731069_12731343_12731422_12734312
transcript_46696.known	chr19	+	1275	7	FSM	ENSG00000198356.12	ENST00000357332.8	1275	7	0	0	0	0	multi-exon	FALSE	canonical	1	456	junction_4	275.050096447094	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	2	True	NA	27	True	AATAAA	-16	NA	12737496	12748323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_4670.nic	chr1	-	4483	25	NIC	ENSG00000077254.14	novel	4502	25	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	157	junction_11	78.3405027747461	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	17	False	77759870	-4	True	AATAAA	-21	NA	77759853	77695986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_46701.known	chr19	-	890	3	FSM	ENSG00000095066.12	ENST00000589134.5	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	23	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-1	True	NA	NA	False	AAAAAG	-29	NA	12775544	12774077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12774742_12774811_12774898_12775404
transcript_46704.known	chr19	-	1114	2	FSM	ENSG00000095066.12	ENST00000592808.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGGGAATAGCAGATGT	-29	True	NA	NA	False	NA	NA	NA	12775572	12773951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12774898_12775404
transcript_46707.known	chr19	-	925	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	8033	junction_5	530.593629814758	3068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	0	True	NA	-9	True	AATAAA	-17	NA	12801800	12796822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_4671.known	chr1	-	4502	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_24	73.196652928942	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGAATGTTGAATTT	18	False	77759870	-8	True	AATAAA	-17	NA	77759852	77695990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_46710.known	chr19	-	784	5	FSM	ENSG00000167815.12	ENST00000334482.9	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	3486.44047525553	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGCTCTG	92	False	NA	-6	True	AATAAA	-20	NA	12801787	12796819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12797167_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_46715.known	chr19	-	1717	4	FSM	ENSG00000167815.12	ENST00000466174.5	1717	4	0	0	0	0	multi-exon	FALSE	canonical	3	8033	junction_3	364.981582488152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	90	False	NA	-9	True	AATAAA	-17	NA	12801789	12796822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12797167_12799858_12801070_12801158_12801271_12801739
transcript_46716.known	chr19	-	699	4	FSM	ENSG00000167815.12	ENST00000477555.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	8033	junction_3	369.158803527997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGAGGCTCTGCGGCTG	91	False	NA	NA	False	NA	NA	NA	12801788	12799915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12800300_12800915_12801070_12801158_12801271_12801739
transcript_4672.nic	chr1	-	4324	24	NIC	ENSG00000077254.14	novel	4327	24	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_11	64.7784649973293	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-3	True	NA	-4	True	AATAAA	-21	NA	77759873	77695986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46720.known	chr19	+	1164	8	FSM	ENSG00000104889.7	ENST00000221486.6	1164	8	0	0	0	0	multi-exon	TRUE	canonical	3	894	junction_6	37.7202376255852	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGGTTTGATTTTT	12	True	NA	24	True	AATAGA	-20	NA	12806583	12813640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_4673.known	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_11	57.5423243589238	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	18	False	77759870	-4	True	AATAAA	-21	NA	77759852	77695986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46731.known	chr19	+	878	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_3	41.3843770844345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCACGGCTGTAA	51	False	NA	20	True	AATAAA	-35	NA	12806676	12807976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
transcript_46735.known	chr19	-	1328	7	FSM	ENSG00000132026.15	ENST00000322912.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	10.3077640640442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	19	False	NA	-5	True	AATAAA	-17	NA	12835416	12825481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_46737.known	chr19	-	1023	6	FSM	ENSG00000132026.15	ENST00000674343.2	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	6.58483105326173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-2	True	NA	-5	True	AATAAA	-17	NA	12834579	12825481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834488
transcript_46741.known	chr19	+	739	3	FSM	ENSG00000267424.1	ENST00000588469.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGGAGGAGCGGCGA	NA	False	NA	-77	True	NA	NA	NA	12825710	12832983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12825913_12826784_12826893_12832554
transcript_46743.nnic	chr19	+	690	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	304	92	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGGCTCCTTAATCCT	282	False	NA	15	True	TATAAA	-12	NA	12826014	12833075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_46744.nnic	chr19	+	856	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	304	258	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTCTGTAAGCATGAG	282	False	NA	NA	False	NA	NA	NA	12826014	12833241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_46745.known	chr19	-	2076	7	FSM	ENSG00000132026.15	ENST00000589272.5	2076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.3209397188508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGAGTGTGGCTGCTTCTT	7	True	NA	-2	True	AATAAA	-20	NA	12835428	12825478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12826667_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_46746.known	chr19	+	1496	13	FSM	ENSG00000105613.10	ENST00000591495.5	1496	13	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	19.6659604392971	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAGTCATTGATTTG	16	True	NA	-34	True	NA	NA	NA	12833950	12858864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12834007_12838268_12838301_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
transcript_46747.known	chr19	-	1938	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_2	27.1116211245289	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTTAACCTTCTCT	-5	True	NA	-4	True	AATAAA	-15	NA	12881449	12875208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
transcript_46750.known	chr19	-	745	5	FSM	ENSG00000105612.9	ENST00000592506.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	102.49878048055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTGAACCAGATAGC	23	True	NA	NA	False	NA	NA	NA	12881466	12876253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12876364_12878381_12878580_12880801_12880881_12880971_12881153_12881289
transcript_46756.known	chr19	+	1852	12	FSM	ENSG00000105607.13	ENST00000222214.10	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	69.7486633066029	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGAGAAGTAGTTTCA	-10	True	NA	36	True	NA	NA	NA	12891159	12899999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_4676.nic	chr1	-	4221	23	NIC	ENSG00000077254.14	novel	4327	24	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	89.1020517150683	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-3	True	NA	-4	True	AATAAA	-21	NA	77759873	77695986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77697475_77697862_77697932_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46764.nic	chr19	+	2140	11	NIC	ENSG00000105607.13	novel	1852	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	310	junction_1	71.7613405671884	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAAGGTGTCAGGCCGGT	NA	False	NA	6	True	AATAAA	-16	NA	12891149	12899969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_46767.nic	chr19	+	2118	10	ISM	ENSG00000105607.13	ENST00000222214.10	1852	12	-10	1622	-10	-6	intron_retention	FALSE	canonical	3	310	junction_1	73.7675695748996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAACCCAGCATGCGCTA	NA	False	NA	NA	False	AAAAAG	-23	NA	12891149	12898377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302
transcript_46768.known	chr19	+	791	6	FSM	ENSG00000105607.13	ENST00000587832.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	82.2206786641901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCCCAAAGTTTAAAGT	10	True	NA	NA	False	NA	NA	NA	12891179	12893882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482
transcript_46769.known	chr19	-	1248	6	FSM	ENSG00000161860.8	ENST00000293695.8	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	1.93907194296653	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGATAGGGTCTCACT	-14	True	NA	NA	False	NA	NA	NA	12919293	12898785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12899386_12900003_12900121_12900459_12900649_12904491_12904667_12918221_12918338_12919242
transcript_4677.nic	chr1	-	4184	23	NIC	ENSG00000077254.14	novel	4327	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	83.960980705276	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	16	True	NA	-4	True	AATAAA	-21	NA	77759812	77695986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77697475_77697862_77697932_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46770.known	chr19	+	1051	5	FSM	ENSG00000105607.13	ENST00000590627.5	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	91.9211618725525	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGTGACCACCGTC	10	True	NA	NA	False	NA	NA	NA	12891179	12893834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482
transcript_46771.known	chr19	+	748	1	FSM	ENSG00000240616.1	ENST00000464444.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTTGAGTAACAAATA	10	False	NA	NA	False	NA	NA	NA	12894132	12894880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12894100_12894900
transcript_46772.known	chr19	+	1867	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	46.2783966878715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	-10	True	NA	-17	True	NA	NA	NA	12891159	12899946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_46775.known	chr19	-	1811	13	FSM	ENSG00000179115.11	ENST00000314606.9	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_4	56.176000708092	895	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGCTTTCCTTAGGG	3	True	NA	-19	True	AATAAA	-18	NA	12933711	12922478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_46785.known	chr19	+	1678	10	FSM	ENSG00000179218.15	ENST00000586967.2	1678	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	956.217664667529	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	0	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712_12943989_12944211
transcript_46786.known	chr19	+	1901	9	FSM	ENSG00000179218.15	ENST00000316448.10	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	2624	junction_3	208.782183147892	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	0	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_4679.known	chr1	-	2917	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	77.703722438025	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	18	False	77759870	NA	False	AATAAA	-15	NA	77759852	77711651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_46794.known	chr19	+	1772	9	FSM	ENSG00000179262.10	ENST00000586534.6	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_6	256.153762416249	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATGGTCTGTGCCTGC	-5	True	NA	26	True	AATAAA	-14	NA	12945861	12953642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
transcript_46796.known	chr19	+	1736	9	FSM	ENSG00000179262.10	ENST00000316856.7	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_6	164.184300025916	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTTTTAAAAACTAG	9	True	NA	7	True	GATAAA	-13	NA	12945875	12953623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_46799.known	chr19	+	1691	9	FSM	ENSG00000179262.10	ENST00000593114.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	435.361326227997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGTGAATAAAGTTT	27	False	NA	-3	True	GATAAA	-3	NA	12945893	12953613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948513_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_4680.nic	chr1	-	2942	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	-1	15661	-1	0	5prime_fragment	FALSE	canonical	3	165	junction_21	71.2346255839544	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	17	False	77759870	NA	False	AATAAA	-15	NA	77759853	77711651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_46807.known	chr19	-	1769	2	FSM	ENSG00000179271.3	ENST00000316939.3	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTATAAAACTT	-5	True	NA	NA	False	AATAAA	-17	NA	12957223	12953118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_12954527_12956862
transcript_46809.nic	chr19	-	2056	17	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_16	102.605109978743	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	NA	False	NA	-11	True	AATAAA	-20	NA	13116759	13104906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_4681.nic	chr1	-	2759	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_8	58.8082477208767	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-3	True	NA	NA	False	AATAAA	-15	NA	77759873	77711651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46810.known	chr19	-	2128	17	FSM	ENSG00000104907.13	ENST00000357720.9	2128	17	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_8	51.4180172702138	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-2	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_46818.nic	chr19	-	2060	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_8	100.555037444951	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	NA	False	NA	-11	True	AATAAA	-20	NA	13116759	13104906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_4682.nic	chr1	-	2783	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-21	15665	-21	0	5prime_fragment	FALSE	canonical	3	226	junction_8	48.4564495191301	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-3	True	NA	NA	False	AATAAA	-15	NA	77759873	77711651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46826.known	chr19	-	2127	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_15	104.989438622283	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-2	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_46827.nic	chr19	-	2237	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	315	junction_7	48.9459565915987	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	NA	False	NA	-11	True	AATAAA	-20	NA	13116759	13104906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_4684.nic	chr1	-	2564	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_8	58.8082477208767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAAACTGAA	17	True	NA	NA	False	NA	NA	NA	77759811	77711784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_4685.nic	chr1	-	2650	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-21	15798	-21	0	5prime_fragment	FALSE	canonical	3	226	junction_8	48.4564495191301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAAACTGAA	-3	True	NA	NA	False	NA	NA	NA	77759873	77711784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46871.known	chr19	-	582	4	FSM	ENSG00000104907.13	ENST00000591717.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	184.105645999488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCACCAGAGGGTGTCG	-11	True	NA	NA	False	NA	NA	NA	13116749	13113000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13113012_13115278_13115467_13116145_13116432_13116652
transcript_46873.known	chr19	-	2263	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_8	53.0821585427303	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTGTGGTTTGTGTAT	89	False	NA	-6	True	AATAAA	-25	NA	13116649	13104901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_46874.known	chr19	-	2179	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	103.953408912309	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	81	False	NA	-11	True	AATAAA	-20	NA	13116657	13104906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_46875.known	chr19	-	2251	15	FSM	ENSG00000104907.13	ENST00000588511.5	2251	15	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_10	106.148553010027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACCAATAAAGAGATGT	13	True	NA	-43	True	GGGGCT	-21	NA	13116725	13104938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116432_13116652
transcript_46881.known	chr19	-	1099	8	FSM	ENSG00000104915.15	ENST00000242770.9	1099	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	186.999399758941	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	4826	False	NA	-5	True	AATAAA	-19	NA	13150178	13144061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13144487_13144576_13144672_13144767_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_46884.known	chr19	-	1128	7	FSM	ENSG00000104915.15	ENST00000343587.9	1128	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	191.633910244392	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	4658	False	NA	-1	True	AATAAA	-23	NA	13150346	13144057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145386_13149572_13149594_13149727_13149898_13150138
transcript_46886.known	chr19	-	1241	7	FSM	ENSG00000104915.15	ENST00000589083.5	1241	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	162.644465698106	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	18	True	NA	-5	True	AATAAA	-19	NA	13150226	13144061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_46889.nnic	chr19	+	2049	11	NNC	ENSG00000104957.14	novel	1922	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	39.0486875579705	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-11	True	NA	14	True	ATTAAA	-14	NA	13731755	13763289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_13732081_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_46891.known	chr19	+	1922	11	FSM	ENSG00000104957.14	ENST00000586600.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	37.6644394621771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTGTTAGATGGAC	-7	True	NA	21	True	ATTAAA	-21	NA	13731759	13763296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_46894.known	chr19	+	1673	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	20.2325980707214	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-19	True	NA	14	True	ATTAAA	-14	NA	13747894	13763289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_46896.nic	chr19	+	1883	10	NIC	ENSG00000104957.14	novel	1673	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	8	junction_7	41.0152034443357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-5	True	NA	14	True	ATTAAA	-14	NA	13747851	13763289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13761490_13761569_13762298_13762438_13762589
transcript_46898.known	chr19	+	1783	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.1373130916139	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	7	True	NA	4	True	ATTAAA	-4	NA	13747863	13763279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_469.known	chr1	-	4795	5	FSM	ENSG00000116237.16	ENST00000343813.10	4795	5	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	53.4672797138586	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	13	True	NA	-4	True	AATAAA	-22	NA	6235964	6221192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
transcript_4690.nic	chr1	-	1736	13	ISM	ENSG00000077254.14	ENST00000370792.7	2917	22	-1	11773	-1	-5401	5prime_fragment	FALSE	canonical	3	165	junction_12	80.8027433527682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAAACAGCACAAGA	17	False	77759870	NA	False	NA	NA	NA	77759853	77723424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_46902.nnic	chr19	+	746	2	NNC	ENSG00000104957.14	novel	617	2	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATACTTTCTTTCTTTTT	-11	True	NA	NA	False	AAAAAG	-1	NA	13731755	13732595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_13732081_13732174
transcript_46903.known	chr19	+	897	3	FSM	ENSG00000104979.9	ENST00000588234.6	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	2379	junction_1	63	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGGTACTACCTGGTT	-3	True	NA	NA	False	ATTAAA	-19	NA	13774455	13778773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13774575_13774651_13774708_13778051
transcript_46904.known	chr19	+	504	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTGCAGTCCTGTGT	20	True	NA	14	True	AATAAA	-14	NA	13774478	13778459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13774575_13778051
transcript_46905.known	chr19	+	491	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	-5	True	NA	17	True	AATAAA	-17	NA	13774823	13778462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13774904_13778051
transcript_46906.known	chr19	+	3117	29	FSM	ENSG00000132024.18	ENST00000589606.5	3117	29	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_23	50.6534846797738	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCCCCGGAGCAGGGA	129	False	NA	NA	False	NA	NA	NA	13906441	13930659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928126_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
transcript_4691.nic	chr1	-	1577	12	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-21	27438	-21	-5401	5prime_fragment	FALSE	canonical	3	286	junction_11	42.4927801354108	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAAACAGCACAAGA	-3	True	NA	NA	False	NA	NA	NA	77759873	77723424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_46910.known	chr19	+	2278	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	303	junction_6	40.7338072803851	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	13	False	NA	16	True	AATAAA	-22	NA	13952491	13961449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
transcript_46912.nic	chr19	-	439	2	ISM	ENSG00000132005.9	ENST00000588885.1	886	5	-79	14805	-19	50	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTAATATGTTAATGAG	-1	True	NA	-1	True	NA	NA	NA	14006341	13998117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_13998318_14006102
transcript_46913.known	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_6	15.1071126318369	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	-23	True	NA	8	True	AATAAA	-21	NA	14031761	14053218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
transcript_46914.known	chr19	-	1689	4	FSM	ENSG00000105011.9	ENST00000263382.8	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	23.6126143312331	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTGTGCTTTTGTC	-3	True	NA	-4	True	ATTAAA	-39	NA	14136589	14119511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14120666_14121531_14121709_14126121_14126238_14136347
transcript_46915.known	chr19	-	765	3	FSM	ENSG00000105011.9	ENST00000474890.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATGAGCCAGA	12	False	NA	NA	False	NA	NA	NA	14136574	14121286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14121709_14126121_14126238_14136347
transcript_46916.known	chr19	+	686	2	FSM	ENSG00000267169.2	ENST00000588658.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGGCTATATTTGCTG	15	True	NA	NA	False	NA	NA	NA	14137187	14155801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14137224_14155151
transcript_46926.known	chr19	-	1498	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_6	51.4800932400088	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTCATCTTGGCCT	7	True	NA	0	True	AATAAA	-37	NA	14419341	14408797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_46941.known	chr19	-	1355	10	FSM	ENSG00000123136.15	ENST00000324340.13	1355	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	327.89737930948	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	51	False	NA	-21	True	AATAAA	-16	NA	14419329	14408818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_46951.known	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	57.2407197718547	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	11	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_46956.known	chr19	-	1921	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_8	197.919135949508	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-12	True	NA	-3	True	CATAAA	-17	NA	14496127	14477761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
transcript_46957.known	chr19	-	1386	8	FSM	ENSG00000123159.16	ENST00000586027.5	1386	8	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	164.972601312077	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-17	True	NA	NA	False	NA	NA	NA	14496132	14478245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
transcript_46958.nic	chr19	-	1568	8	NIC	ENSG00000123159.16	novel	1921	9	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_5	297.440853321278	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	23	True	NA	-3	True	CATAAA	-17	NA	14496092	14477761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14492856_14492913_14496036
transcript_46959.known	chr19	-	1068	7	FSM	ENSG00000123159.16	ENST00000591349.5	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	305.601410700642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-17	True	NA	NA	False	NA	NA	NA	14496132	14478245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14496036
transcript_46962.known	chr19	+	1204	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	409.074590794067	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	-1	True	NA	2	True	AATAAA	-21	NA	14529593	14565980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_46965.known	chr19	+	1170	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	378.320658745109	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGGCTCTGTGTGTT	-3	True	NA	-1	True	AATAAA	-18	NA	14529591	14565977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_46969.known	chr19	+	1139	13	FSM	ENSG00000099797.15	ENST00000215567.10	1139	13	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_10	88.1097800095616	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	-1	True	NA	2	True	AATAAA	-21	NA	14529593	14565980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_46980.known	chr19	+	1164	12	FSM	ENSG00000099797.15	ENST00000597607.5	1164	12	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_9	92.0012576270492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGCTCTGTGTGTTT	31	False	NA	0	True	AATAAA	-19	NA	14529656	14565978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_47.known	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00136_+_0_1000
transcript_47003.known	chr19	-	2180	4	FSM	ENSG00000132002.9	ENST00000601533.6	2180	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	346.7374927649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTAAACCTCAGGGGAG	-33	True	NA	-15	True	ATTAAA	-5	NA	14529308	14514782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14516171_14516465_14517047_14527686_14527811_14529221
transcript_47004.known	chr19	-	2242	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_1	20	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-4	True	NA	-1	True	ATTAAA	-19	NA	14518397	14514768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14516171_14516465_14517047_14518138
transcript_47006.known	chr19	+	584	6	FSM	ENSG00000099797.15	ENST00000599101.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_3	79.304476544518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGCCCACAGCTCTCC	9	True	NA	-53	True	NA	NA	NA	14564693	14565925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_47007.known	chr19	+	720	5	FSM	ENSG00000099797.15	ENST00000593775.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_2	87.3709763022023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	13	True	NA	-3	True	AATAAA	-16	NA	14564697	14565975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_4701.known	chr1	+	1978	15	FSM	ENSG00000180488.16	ENST00000645756.1	1978	15	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_14	9.18433671074436	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTCACATTATTCC	-13	True	NA	NA	False	AATAAA	-16	NA	77779629	77868636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77868247
transcript_47012.known	chr19	-	529	3	FSM	ENSG00000099795.7	ENST00000593353.5	529	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1259.5	1299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-8	True	NA	-4	True	AATAAA	-19	NA	14572062	14566077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_14566266_14566764_14566932_14571888
transcript_47013.known	chr19	+	3595	12	FSM	ENSG00000160961.12	ENST00000540689.6	3595	12	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_11	13.8169855941551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGTTTCTTTCCTC	-3	True	NA	NA	False	AATAAA	-22	NA	14690068	14733746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14715381_14715471_14716111_14716239_14716993_14717090_14717656_14717734_14731174
transcript_47016.nic	chr19	+	616	2	ISM	ENSG00000160961.12	ENST00000596285.5	573	5	25	5416	6	-5416	5prime_fragment	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAAAAAGTT	8	True	NA	NA	False	AGTAAA	-27	NA	14690079	14693995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_14690151_14693450
transcript_47017.known	chr19	+	1257	1	FSM	ENSG00000160961.12	ENST00000594592.1	1257	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTCTCAGGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	14707993	14709250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_14708000_14709200
transcript_4702.known	chr1	+	3195	12	FSM	ENSG00000162614.19	ENST00000330010.12	3195	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	8.69501614634061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTCTGTATTTTA	-5	True	NA	5	True	AATAAA	-16	NA	77888514	77943891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
transcript_47023.nic	chr19	-	2484	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_15	102.691901660582	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	6	True	NA	-13	True	AATAAA	-29	NA	15125689	15114986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
transcript_47024.known	chr19	-	2305	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_15	49.4913684954817	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-10	True	NA	-13	True	AATAAA	-29	NA	15125786	15114986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
transcript_47037.nic	chr19	-	1420	6	ISM	ENSG00000105131.8	ENST00000221730.8	1838	7	522	3	522	0	3prime_fragment	FALSE	canonical	3	173	junction_5	15.1393526942204	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTGTATTTCATTT	8692	False	NA	-5	True	AATACA	-22	NA	15231926	15226921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775
transcript_47038.known	chr19	-	1821	9	FSM	ENSG00000141867.19	ENST00000594841.5	1821	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	435.092931883523	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAGAAAAATAATAGCAG	3	True	NA	4	True	AATAAA	-34	NA	15331906	15256098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15331835
transcript_47040.known	chr19	-	3715	15	FSM	ENSG00000105127.10	ENST00000598597.7	3715	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	76.430340433466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTCTGGGTCATTTC	-4	True	NA	1	True	AATAAA	-17	NA	15379815	15353520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_47041.known	chr19	-	3665	14	FSM	ENSG00000105127.10	ENST00000269701.7	3665	14	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	26.1721655298279	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACTAGTGGAACTGCTT	-11	True	NA	NA	False	ATTAAA	-17	NA	15379787	15353384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_47045.nic	chr19	-	1418	11	ISM	ENSG00000105127.10	ENST00000269701.7	3665	14	-44	8422	-16	-334	5prime_fragment	FALSE	canonical	3	191	junction_7	23.6059314580044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAAGAAAATTGAGAAG	-2	True	NA	NA	False	AATACA	-10	NA	15379831	15361806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_47046.nic	chr19	-	1203	9	ISM	ENSG00000105127.10	ENST00000269701.7	3665	14	-44	14907	-16	5425	5prime_fragment	FALSE	canonical	3	191	junction_5	24.6221445044903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGGGAAAAGCAAA	-2	True	NA	-4	True	NA	NA	NA	15379831	15368291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_47047.known	chr19	-	2002	15	FSM	ENSG00000011243.19	ENST00000680649.1	2002	15	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_12	184.426468948954	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-24	True	NA	-20	True	NA	NA	NA	15419030	15380065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_47048.nic	chr19	-	924	5	ISM	ENSG00000011243.19	ENST00000594893.5	1453	8	-63	1215	-1	-182	5prime_fragment	FALSE	canonical	1	284	junction_2	214.856201911883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGAGGCAGCCTTCC	-25	True	NA	NA	False	NA	NA	NA	15419031	15401149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_47049.known	chr19	-	2390	13	FSM	ENSG00000011243.19	ENST00000596213.6	2390	13	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_5	104.950649778307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-16	True	NA	-20	True	NA	NA	NA	15419022	15380065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15404043_15410519_15410595_15418910
transcript_47050.known	chr19	-	2078	14	FSM	ENSG00000011243.19	ENST00000397410.10	2078	14	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_11	158.275095694679	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	18	True	NA	-4	True	AATAAA	-15	NA	15418988	15380049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_47051.known	chr19	+	2491	9	FSM	ENSG00000167460.17	ENST00000586833.7	2491	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1285.68196276334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	-2	True	NA	21	True	AATAAA	-32	NA	16077015	16102946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16077131_16080914_16081076_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_47053.known	chr19	+	2474	8	FSM	ENSG00000167460.17	ENST00000643579.2	2474	8	0	0	0	0	multi-exon	FALSE	canonical	3	2824	junction_5	126.550304590059	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	-16	True	NA	11	True	AATAAA	-16	NA	16076494	16103002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_47057.known	chr19	+	2567	8	FSM	ENSG00000167461.12	ENST00000300935.8	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_6	94.1605229468945	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTAATGTGTCTTTTG	-2	True	NA	20	True	NA	NA	NA	16111888	16134234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129553_16129605_16132211
transcript_47060.known	chr19	+	1463	4	FSM	ENSG00000105058.12	ENST00000263384.12	1463	4	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_2	53.7215040742532	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	-12	True	NA	43	True	AATAAA	-21	NA	16185409	16192046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16185517_16185623_16185766_16190519_16190574_16190886
transcript_47061.known	chr19	+	798	3	FSM	ENSG00000105058.12	ENST00000588367.5	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	564.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAACTATGCGGCCTT	1	True	NA	NA	False	NA	NA	NA	16185422	16191448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16185517_16185623_16185766_16190886
transcript_47063.known	chr19	+	12859	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_9	28.8610235037836	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCATTGTTTTCCTTT	-27	True	NA	NA	False	AATAAA	-23	NA	16197910	16245906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_47065.known	chr19	-	3216	24	FSM	ENSG00000127527.14	ENST00000455140.7	3216	24	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	59.9192272949337	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-4	True	NA	-16	True	TATAAA	-42	NA	16471970	16355246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16355852_16361778_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_47067.known	chr19	-	3082	23	FSM	ENSG00000127527.14	ENST00000602022.5	3082	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	53.1703950435852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTTAATCTCTGTAAA	5	True	NA	-8	True	TATAAA	-25	NA	16471961	16355238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16355852_16361778_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_47068.known	chr19	-	2788	23	FSM	ENSG00000127527.14	ENST00000592031.5	2788	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	64.4794797263837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGATGCTCTATCATA	-4	True	NA	-19	True	AATAAA	-16	NA	16471970	16361578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440884_16440910_16441891_16441982_16442177_16442220_16471912
transcript_47070.known	chr19	-	2666	22	FSM	ENSG00000127527.14	ENST00000535753.6	2666	22	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	39.8376524001206	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCCGCAG	-10	True	NA	-37	True	AAGAAA	-15	NA	16471976	16361596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_47071.known	chr19	-	420	4	FSM	ENSG00000127527.14	ENST00000602151.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	23.4568161143456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTATTTTTCTT	67	False	NA	NA	False	TTTAAA	-42	NA	16471943	16440652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16440910_16441891_16441982_16442177_16442220_16471912
transcript_47072.known	chr19	-	1263	9	FSM	ENSG00000269058.6	ENST00000269881.8	1263	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.3946555075835	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTACATGGCACTTTGTC	-1	True	NA	NA	False	NA	NA	NA	16496167	16479060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16479275_16480613_16480707_16482449_16482582_16482677_16482786_16483929_16484116_16485162_16485258_16490366_16490571_16495750_16495853_16496038
transcript_47074.nic	chr19	+	2693	9	NIC	ENSG00000105072.9	novel	3346	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	5.04975246918104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAAGTTTTGTGTTTCTG	-2	True	NA	15	True	AGTAAA	-32	NA	16496405	16518619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16518001
transcript_47075.known	chr19	+	3346	9	FSM	ENSG00000105072.9	ENST00000221671.8	3346	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	6.6226410894748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGTGTGCTGTGCCT	-14	True	NA	16	True	ATTAAA	-17	NA	16496393	16521352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16520093
transcript_47076.known	chr19	-	1281	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	272.874513284037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGTGTGTGTGTTGTGT	7	True	NA	-20	True	AATAAA	-7	NA	16660130	16630750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_47077.known	chr19	-	1360	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_1	43.4453679924569	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-7	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_47078.known	chr19	-	1065	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	182.192206199936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-7	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_47079.known	chr19	-	1075	4	FSM	ENSG00000214046.9	ENST00000597711.5	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	234.90565482054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATTTGCTTGTTGA	-7	True	NA	-48	True	AATGAA	-30	NA	16660144	16646341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16647262_16659394_16659448_16659958_16660001_16660084
transcript_47080.known	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	243.968619908381	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-7	True	NA	-41	True	NA	NA	NA	16660144	16646587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_47081.known	chr19	-	850	5	FSM	ENSG00000214046.9	ENST00000358726.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	236.912826795005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCCTGCCTATAGTTC	-5	True	NA	NA	False	AATAAA	-18	NA	16660142	16652355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_47082.known	chr19	+	2631	6	FSM	ENSG00000072954.7	ENST00000187762.7	2631	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	18.0377382174152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATGGCTTGTCTGATT	-29	True	NA	15	True	AATAAA	-15	NA	16661138	16690023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16682509_16686287_16686406_16688143
transcript_47084.known	chr19	+	798	3	FSM	ENSG00000072954.7	ENST00000595452.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGCCAGTAGCACA	74	False	NA	NA	False	NA	NA	NA	16661241	16680937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_16661342_16679983_16680141_16680396
transcript_47085.known	chr19	-	1593	3	FSM	ENSG00000160111.15	ENST00000594249.6	1593	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACAACCACATGCAGT	NA	False	NA	NA	False	NA	NA	NA	16896973	16893108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_16894438_16896175_16896327_16896860
transcript_47087.known	chr19	-	1545	11	FSM	ENSG00000131351.15	ENST00000448593.6	1545	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	57.3515474943789	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	4852	False	NA	-30	True	AGTAAA	-18	NA	17075625	17049760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060090_17062697_17062780_17069030_17069087_17073273_17073336_17075393
transcript_47089.nic	chr19	-	1341	10	NIC	ENSG00000131351.15	novel	1407	11	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	61.7889678114943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	4972	False	NA	-35	True	AGTAAA	-13	NA	17075505	17049765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17069030_17069087_17073273_17073336_17075393
transcript_47091.nnic	chr19	-	1281	10	NIC	ENSG00000131351.15	novel	1407	11	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	67.0104100996882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	4972	False	NA	-35	True	AGTAAA	-13	NA	17075505	17049765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_17050177_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273_17073336_17075393
transcript_47092.known	chr19	+	845	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0860649230787	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	6	True	NA	9	True	AATAAA	-16	NA	17215356	17219829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_47093.known	chr19	+	637	7	FSM	ENSG00000053501.14	ENST00000596136.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.1678966622189	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	-5	True	NA	9	True	AATAAA	-16	NA	17215389	17219829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_47096.known	chr19	+	587	7	FSM	ENSG00000053501.14	ENST00000593597.1	587	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	38.8647941229877	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACTGAAAATGGCGGAC	-19	True	NA	NA	False	NA	NA	NA	17215719	17219640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_47098.nic	chr19	+	616	6	ISM	ENSG00000053501.14	ENST00000596136.5	637	7	315	0	-15	0	3prime_fragment	FALSE	canonical	0	0	junction_4	49.0126514279732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	310	False	NA	9	True	AATAAA	-16	NA	17215704	17219829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_47100.known	chr19	+	1776	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	22.8623598956888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	17215387	17218826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
transcript_47102.known	chr19	+	559	4	FSM	ENSG00000053501.14	ENST00000601662.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	42.8978113919839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCCCCGAGAGGAAACA	-5	True	NA	NA	False	NA	NA	NA	17215345	17217617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17215508_17215991_17216071_17216168_17216322_17217452
transcript_47104.nic	chr19	+	692	4	ISM	ENSG00000053501.14	ENST00000595101.5	1776	5	317	1061	-15	95	3prime_fragment	FALSE	canonical	3	58	junction_3	24.3629956194955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGATGCAGTGCCACGTG	310	False	NA	2	True	AATACA	-8	NA	17215704	17217765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452
transcript_47107.known	chr19	-	3289	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	6.19755776271768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGACTGAAGCTGGA	10	True	NA	NA	False	AATAAA	-28	NA	17264745	17249170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
transcript_47111.known	chr19	-	2136	12	FSM	ENSG00000130307.12	ENST00000431146.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	10.6948663053474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATGTTGCATGATTTG	-1	True	NA	0	True	CATAAA	-19	NA	17264724	17250153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264245_17264348_17264670
transcript_47118.known	chr19	+	1377	9	FSM	ENSG00000105393.16	ENST00000598188.6	1377	9	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_1	129.41696179404	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	-5	True	NA	32	True	AATAAA	-18	NA	17267442	17279337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_47122.nic	chr19	+	1498	9	NIC	ENSG00000105393.16	novel	1472	9	NA	NA	-27	0	intron_retention	FALSE	canonical	3	75	junction_1	362.735354631996	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	NA	False	NA	32	True	AATAAA	-18	NA	17267348	17279337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17267517_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_47124.known	chr19	+	1472	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	302.187002326374	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	NA	False	NA	32	True	AATAAA	-18	NA	17267385	17279337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_47126.known	chr19	+	1366	9	FSM	ENSG00000105393.16	ENST00000601043.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	364.346139508847	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	-5	True	NA	32	True	AATAAA	-18	NA	17267442	17279337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267517_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_4713.known	chr1	+	1263	9	FSM	ENSG00000162614.19	ENST00000401035.7	1263	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	6.44083651399413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAGAAAAACGACGA	-7	True	NA	NA	False	ATTAAA	-9	NA	77888512	77933384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281
transcript_47146.known	chr19	+	930	6	FSM	ENSG00000105393.16	ENST00000447614.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	461.648784250538	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCCTGTACATCTGCA	NA	False	NA	NA	False	NA	NA	NA	17267375	17279048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_4715.nic	chr1	+	1104	8	ISM	ENSG00000162614.19	ENST00000401035.7	1263	9	-36	3972	-36	-3972	5prime_fragment	FALSE	canonical	3	36	junction_7	5.68205194324324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGATGAAAAAAGG	196	False	NA	19	True	AAGAAA	-13	NA	77888476	77929412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315
transcript_47150.known	chr19	+	966	6	FSM	ENSG00000105393.16	ENST00000595632.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	532.416603798191	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTCCTAGGAGGGAAAC	25	False	NA	NA	False	NA	NA	NA	17267501	17279172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_47156.known	chr19	+	4043	5	FSM	ENSG00000130311.11	ENST00000359866.9	4043	5	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	40.1932830209228	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCGCCTGTTCTGTGTGT	10	True	NA	6	True	AATAAA	-16	NA	17309562	17323298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545
transcript_47159.known	chr19	+	863	3	FSM	ENSG00000130312.7	ENST00000595444.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	279.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGAGTTCTTTTG	-3	True	NA	NA	False	NA	NA	NA	17292608	17306655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17292855_17305830_17305958_17306165
transcript_47161.known	chr19	+	764	2	FSM	ENSG00000130312.7	ENST00000252602.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATGTGTCATAACTCT	18	True	NA	19	True	AATAAA	-20	NA	17305871	17306843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17305958_17306165
transcript_47162.known	chr19	-	1001	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_2	51.9488931547151	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	1760	False	17405647	-9	True	AATAAA	-29	NA	17405630	17402938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
transcript_47166.known	chr19	+	1250	9	FSM	ENSG00000141971.13	ENST00000317040.12	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	35.0657863878739	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	-6	True	NA	19	True	AATAAA	-19	NA	17420046	17425332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_47169.nic	chr19	+	1106	8	NIC	ENSG00000141971.13	novel	1250	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_3	114.209617522755	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	11	True	NA	19	True	AATAAA	-19	NA	17420063	17425332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17420226_17420312_17420412_17420537_17420635_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_47171.known	chr19	+	1633	5	FSM	ENSG00000282851.2	ENST00000647283.1	1633	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.08220700148449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTCTTGGCTGCCGG	4	True	NA	-32	True	AGTAAA	-42	NA	17405748	17415687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405772_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_47173.known	chr19	+	563	5	FSM	ENSG00000282851.2	ENST00000634577.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.58602010819715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTTAACCCACTGCAGA	0	True	NA	NA	False	NA	NA	NA	17405823	17414468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405996_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_47174.known	chr19	+	1806	4	FSM	ENSG00000282851.2	ENST00000634675.1	1806	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-2	True	NA	19	True	AATAAA	-22	NA	17405742	17415738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405772_17406076_17406297_17413096_17413306_17414390
transcript_47175.known	chr19	+	1269	4	FSM	ENSG00000282851.2	ENST00000635435.2	1269	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAAAACCCTGCCTGTAC	18	False	NA	NA	False	NA	NA	NA	17405762	17415005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405988_17406076_17406297_17413096_17413306_17414390
transcript_47177.known	chr19	+	1831	3	FSM	ENSG00000282851.2	ENST00000635060.2	1831	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCTTAATTCGTCTCG	6	True	NA	-3	True	NA	NA	NA	17405702	17415716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17405988_17406076_17406297_17414390
transcript_47178.known	chr19	+	934	4	FSM	ENSG00000141971.13	ENST00000526234.1	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_3	42.7629122799964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAAATAAAGTAGAC	17	True	NA	-15	True	AATAAA	-7	NA	17420121	17422965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331
transcript_47179.known	chr19	+	869	4	FSM	ENSG00000130313.7	ENST00000598811.1	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_3	26.0810701893581	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGCCCGCCTCCTGAC	3893	False	NA	NA	False	NA	NA	NA	17515741	17521030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17516281_17517287_17517390_17517709_17517851_17520943
transcript_47180.known	chr19	-	313	2	FSM	ENSG00000269439.7	ENST00000595116.2	359	2	46	0	7	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCTCATTCATTTGCA	28	True	NA	NA	False	AATAAA	-35	NA	17511468	17503435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_17503623_17511342
transcript_47181.nic	chr19	+	2730	6	ISM	ENSG00000130309.12	ENST00000690106.1	3687	13	21384	-13	23	0	3prime_fragment	FALSE	canonical	3	208	junction_1	26.003076741032	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTTTGTGGGATTTTG	8478	False	NA	45	True	AATAAA	-20	NA	17577097	17583157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698_17580906_17581176
transcript_47182.known	chr19	+	3288	7	FSM	ENSG00000130479.11	ENST00000324096.9	3288	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	270.85543499562	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCCTCTCTTCTTTC	-10	True	NA	28	True	AATAAA	-16	NA	17719479	17734513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17719621_17720935_17721038_17724125_17724209_17725048_17725190_17725828_17728173_17733192_17733429_17734272
transcript_47184.nic	chr19	+	1762	10	ISM	ENSG00000130475.15	ENST00000597512.1	2934	25	15719	-24	-19	0	3prime_fragment	TRUE	canonical	3	200	junction_5	17.3340455694125	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	1956	False	NA	13	True	AATAAA	-38	NA	17778421	17788562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_47188.nnic	chr19	+	1653	9	NIC	ENSG00000130475.15	novel	2979	27	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	70.6058602383683	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	1956	False	NA	13	True	AATAAA	-38	NA	17778421	17788562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17778885_17781230_17781344_17781451_17781540_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_47190.nic	chr19	+	1605	9	NIC	ENSG00000130475.15	novel	2979	27	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	72.2875118882923	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	5	True	NA	13	True	AATAAA	-38	NA	17778465	17788562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_17778885_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_47193.known	chr19	+	2692	3	FSM	ENSG00000179913.11	ENST00000318683.7	2692	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCACAGACAGATTCTT	-13	True	NA	NA	False	NA	NA	NA	17795137	17813576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17795207_17807757_17808375_17811570
transcript_47194.nnic	chr19	-	896	3	Fusion	ENSG00000248099.4_ENSG00000105639.20	novel	899	3	NA	NA	-9167	0	multi-exon	FALSE	canonical	2	5	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGCATTTTCTCTAG	77	False	NA	-2	True	AATAAA	-13	NA	17830741	17816513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_17817060_17830107_17830219_17830502
transcript_47199.known	chr19	+	491	6	FSM	ENSG00000105640.13	ENST00000599898.5	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	8070.33775253552	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGCATGTTTTCTTT	10	False	NA	13	True	AATAAA	-18	NA	17859931	17863315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17859975_17861292_17861308_17861424_17861473_17862093_17862224_17862917_17863028_17863170
transcript_4720.nic	chr1	+	837	4	ISM	ENSG00000162614.19	ENST00000401035.7	1263	9	-158	14986	-158	-14986	5prime_fragment	FALSE	canonical	3	42	junction_3	4.64279609239471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATGGTGGCTCACCTC	74	False	NA	NA	False	ATTAAA	-45	NA	77888354	77918398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124
transcript_47206.known	chr19	+	634	5	FSM	ENSG00000105640.13	ENST00000222247.10	634	5	0	0	0	0	multi-exon	TRUE	canonical	3	16288	junction_1	2069.0013744558	22426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCATGTTTTCTTTGCAC	7	True	NA	17	True	AATAAA	-22	NA	17859909	17863319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17859975_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_47210.known	chr19	+	683	5	FSM	ENSG00000105640.13	ENST00000597648.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	8175.55193855436	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	203	False	NA	-59	True	NA	NA	NA	17860124	17863243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17860315_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_47221.known	chr19	+	987	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	403.92287320725	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	1	True	NA	24	True	AATAAA	-27	NA	17933014	17943985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_47227.known	chr19	+	1055	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	815.362802683566	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGTGAGTGGGTGGGG	3	False	NA	30	True	AATAAA	-33	NA	17935095	17943991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_47229.known	chr19	+	988	7	FSM	ENSG00000216490.4	ENST00000407280.4	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	16.9844700306551	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGATGGTGTAATTA	8	True	NA	NA	False	AGTAAA	-16	NA	18173812	18178117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18173974_18175039_18175223_18175310_18175386_18175604_18175698_18177139_18177293_18177710_18177765_18177848
transcript_47233.known	chr19	+	1578	5	FSM	ENSG00000254858.10	ENST00000599612.3	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_3	8.73212459828649	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	4	True	NA	NA	False	NA	NA	NA	18193217	18196948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18193469_18193863_18194035_18194776_18194854_18194957_18195087_18195998
transcript_47235.known	chr19	-	1496	5	FSM	ENSG00000105649.10	ENST00000222256.9	1496	5	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_3	15.116216457831	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGGTCCTGCCCACCC	-2	True	NA	-7	True	AATAAA	-32	NA	18204042	18196783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18202512_18202741_18203895
transcript_47236.known	chr19	-	1253	4	FSM	ENSG00000105649.10	ENST00000464076.3	1253	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	45.4386032649185	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCCCTGTGAGCACC	-2	True	NA	-22	True	AATAAA	-17	NA	18204042	18196798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18203895
transcript_47237.known	chr19	+	415	3	FSM	ENSG00000268650.3	ENST00000599416.2	415	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGTGCATAGGTTCAA	4350	False	NA	NA	False	AATAAA	-15	NA	18204733	18209046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18204900_18208289_18208430_18208937
transcript_47239.known	chr19	-	1704	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_4	358.518479300579	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTCTTGAGTCTTCA	6	True	NA	-12	True	AATAAA	-20	NA	18323076	18306235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
transcript_4724.known	chr1	-	6714	20	FSM	ENSG00000162613.17	ENST00000370768.7	6714	20	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_16	166.31513990546	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-1	True	NA	NA	False	AATAAA	-20	NA	77979072	77944054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_47241.known	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	1833.29775723058	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	11	True	NA	-16	True	AATAAA	-26	NA	18323071	18306906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
transcript_47242.known	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_3	412.637317211562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	5	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
transcript_47243.known	chr19	+	7081	5	FSM	ENSG00000130517.14	ENST00000269919.11	7081	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	6.34428877022476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	-2	True	NA	12	True	AATAAA	-17	NA	18340597	18369950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363390
transcript_47244.nic	chr19	+	757	5	NIC	ENSG00000130517.14	novel	7081	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	8.4372685153431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACACTTGAAATACGCA	-13	True	NA	-8	True	GGGGCT	-42	NA	18340586	18369930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18369705
transcript_47245.known	chr19	+	1409	4	FSM	ENSG00000130517.14	ENST00000252813.5	1409	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.41629792788369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	9	True	NA	NA	False	NA	NA	NA	18340608	18364342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18340716_18355894_18356012_18357382_18357616_18363390
transcript_47246.known	chr19	+	769	5	FSM	ENSG00000130517.14	ENST00000604499.6	769	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.5593560409714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGGATCCGATCTGGA	-2	True	NA	NA	False	NA	NA	NA	18340597	18363678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363430
transcript_47250.known	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	102.318180202738	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	1	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_47254.known	chr19	-	1703	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_8	236.78119294685	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	8299	False	NA	-29	True	AATAAA	-27	NA	18438167	18434808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
transcript_47259.known	chr19	-	1466	9	FSM	ENSG00000105655.19	ENST00000577820.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	254.641138418363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGAAGGCCCCCACA	8351	False	NA	-81	True	NA	NA	NA	18438115	18434860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859_18437989_18438092
transcript_4726.nic	chr1	-	1033	11	ISM	ENSG00000162613.17	ENST00000294623.8	2201	21	-52	17811	-29	776	5prime_fragment	FALSE	canonical	3	623	junction_7	75.6206982247585	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATGATGCTGGTGTT	363	False	NA	12	True	AAGAAA	-21	NA	77979139	77964292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_47260.nic	chr19	-	1504	9	NIC	ENSG00000105655.19	novel	1654	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_6	257.939885196144	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-11	True	NA	-41	True	AATAAA	-15	NA	18438145	18434820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18437598_18437761_18437859_18437989_18438092
transcript_47261.known	chr19	-	2148	9	FSM	ENSG00000105655.19	ENST00000577916.6	2148	9	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_8	107.431373443701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	-5	True	NA	-42	True	AATAAA	-14	NA	18438164	18434821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18437106_18437598_18437761_18437859_18437989_18438092
transcript_47263.nnic	chr19	-	1342	8	NIC	ENSG00000105655.19	novel	1654	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	85	junction_6	267.876304076554	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-11	True	NA	-41	True	AATAAA	-15	NA	18438145	18434820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18437859_18437989_18438092
transcript_47266.known	chr19	+	793	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	8	True	NA	20	True	AATAAA	-26	NA	18433274	18434562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18433614_18433709_18433818_18434216
transcript_47268.known	chr19	-	623	2	FSM	ENSG00000105656.13	ENST00000596915.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGCGCATGCCAGGGA	-3	True	NA	NA	False	NA	NA	NA	18522067	18472406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18472883_18521920
transcript_47271.known	chr19	-	1756	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_8	889.330919497911	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	4	True	NA	-10	True	AATAAA	-17	NA	18542972	18531761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
transcript_47275.nic	chr19	-	1735	9	NIC	ENSG00000105701.16	novel	1761	9	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	856	junction_8	784.424460591968	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCACGGACTCCTGAGC	1104	False	NA	-11	True	AATAAA	-16	NA	18542949	18531762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18542887
transcript_4728.known	chr1	-	2156	3	FSM	ENSG00000162613.17	ENST00000489495.5	2156	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	28	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	1101	False	NA	NA	False	AATAAA	-20	NA	77948333	77944054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_77944270_77945505_77945643_77946529
transcript_47282.known	chr19	-	1761	9	FSM	ENSG00000105701.16	ENST00000608443.6	1761	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1035.05023277858	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCACGGACTCCTGAGC	-1	True	NA	-11	True	AATAAA	-16	NA	18543573	18531762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543485
transcript_47283.known	chr19	-	1710	9	FSM	ENSG00000105701.16	ENST00000222308.8	1710	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1108.21398401888	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	529	False	NA	-10	True	AATAAA	-17	NA	18543524	18531761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543485
transcript_47284.known	chr19	-	1292	6	FSM	ENSG00000105701.16	ENST00000544835.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1565.79978285859	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-1	True	NA	0	True	AATAAA	-27	NA	18543573	18531751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18541678_18541996_18543485
transcript_47289.known	chr19	+	1327	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	373.736591732734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	-1	True	NA	-43	True	NA	NA	NA	18557875	18569310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
transcript_47291.known	chr19	+	1095	6	FSM	ENSG00000105700.11	ENST00000595073.5	1095	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	287.313069664434	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATATTTTTGTACCCG	11	True	NA	-56	True	NA	NA	NA	18557887	18569297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568680_18568829
transcript_47292.known	chr19	+	895	6	FSM	ENSG00000105700.11	ENST00000600654.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_5	308.874472885022	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAAAAGTATCAAATACTT	15	False	NA	NA	False	NA	NA	NA	18557891	18569091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568690_18568829
transcript_47293.known	chr19	+	656	6	FSM	ENSG00000105700.11	ENST00000600372.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	391.365506911378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGACACCAGCCCCG	22	False	NA	NA	False	NA	NA	NA	18557805	18568495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18560419_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_473.known	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	2702.80673046043	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-1	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
transcript_47301.known	chr19	+	1344	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	108.273669467697	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	-7	True	NA	25	True	AATAAA	-27	NA	18557869	18569378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_47302.nnic	chr19	+	1339	5	NNC	ENSG00000105700.11	novel	1496	5	NA	NA	13	0	intron_retention	FALSE	canonical	3	19	junction_1	346.79713089932	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	-9	True	NA	25	True	AATAAA	-27	NA	18557774	18569378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_18557815_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_47303.known	chr19	+	1496	5	FSM	ENSG00000105700.11	ENST00000539106.5	1496	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	348.943673821435	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTTCTTCAGTCCT	NA	False	NA	34	True	AATAAA	-36	NA	18557761	18569387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18557950_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_47306.known	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2813.21656471733	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	-9	True	NA	29	True	AATAAA	-17	NA	18571854	18575229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_47307.known	chr19	+	779	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2809.32480144251	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	11	True	NA	42	True	AATAAA	-30	NA	18571874	18575242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_47312.known	chr19	+	572	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_1	1388.27417591051	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	63	False	NA	41	True	AATAAA	-29	NA	18571801	18575241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_47315.known	chr19	+	2848	5	FSM	ENSG00000221983.8	ENST00000442744.7	2848	5	0	0	0	0	multi-exon	FALSE	canonical	3	1378	junction_1	1904.14592074767	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGGCAGGAGAAACTGAC	-7	True	NA	104	True	NA	NA	NA	18571856	18577550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18571910_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_47319.known	chr19	+	491	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	247.140086230911	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	0	True	NA	14	True	AATAAA	-16	NA	18588801	18592336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
transcript_47320.known	chr19	-	1741	9	FSM	ENSG00000006016.12	ENST00000392386.8	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	12.6682427747498	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-7	True	NA	-4	True	AATAAA	-17	NA	18606799	18593236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18593580_18594064_18594108_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
transcript_47322.known	chr19	+	2438	14	FSM	ENSG00000105671.12	ENST00000629999.3	2438	14	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	62.4117838971998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACACAGCCACGCTT	-12	True	NA	NA	False	NA	NA	NA	18919704	18929189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_47325.known	chr19	+	1793	13	FSM	ENSG00000105671.12	ENST00000247003.9	1793	13	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_8	11.5674351329738	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	-2	True	NA	30	True	AATAAA	-21	NA	18919714	18928630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_47326.known	chr19	+	1691	13	FSM	ENSG00000105671.12	ENST00000602113.5	1691	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	51.4837487843386	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAGTCTGACTTTCG	21	True	NA	22	True	AATAAA	-13	NA	18919737	18928622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920650_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_4733.nnic	chr1	+	2033	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	-14	-756	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	58.1969835033474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCAACTACTTGTT	-1	True	NA	7	True	AATAAA	-21	NA	77979266	78017208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979294_78005079_78005322_78013050_78013620_78016013
transcript_47332.known	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	1124.541635512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-6	True	NA	-51	True	NA	NA	NA	18919380	18899562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_4734.nnic	chr1	+	2230	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	5	-646	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	58.1969835033474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	8	True	NA	16	True	AATATA	-20	NA	77979179	78017318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979294_78005079_78005322_78013050_78013620_78016013
transcript_47343.known	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	TRUE	canonical	3	2182	junction_7	247.864259944883	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-13	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_4735.nnic	chr1	+	2356	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	-11	-756	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	58.5168541723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCAACTACTTGTT	2	True	NA	7	True	AATAAA	-21	NA	77979269	78017208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
transcript_47350.known	chr19	-	1607	10	FSM	ENSG00000051128.19	ENST00000542541.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	143.321274255851	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGCTGGTTTTCTATG	0	True	NA	NA	False	NA	NA	NA	18940304	18929442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18939850
transcript_4736.nnic	chr1	+	2466	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	-11	-646	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	58.5168541723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	2	True	NA	16	True	AATATA	-20	NA	77979269	78017318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
transcript_47361.known	chr19	-	907	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	917.587019034162	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCAGCACCCCCAT	-1	True	NA	-61	True	NA	NA	NA	18919375	18899572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
transcript_47364.known	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	869.002652110452	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	11	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_47375.known	chr19	+	1882	14	FSM	ENSG00000105671.12	ENST00000595858.5	1882	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	75.6396783886973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGACTTTCGAAGA	10	True	NA	26	True	AATAAA	-17	NA	18919726	18928626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924852_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_47379.known	chr19	-	3640	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	47.665081558726	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	317	False	NA	-13	True	AATAAA	-16	NA	19033559	18990892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_47380.known	chr19	-	6189	11	FSM	ENSG00000064607.17	ENST00000452918.7	6189	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	86.3421102359677	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-6	True	NA	-13	True	AATAAA	-16	NA	19033517	18990892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_18993741_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_47382.nic	chr19	+	2631	10	NIC	ENSG00000105676.14	novel	2461	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	206.393367679832	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	-24	True	NA	20	True	AATAAA	-21	NA	19033588	19058176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_19033931_19034130_19034239_19037551_19037708_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_47384.nnic	chr19	+	2418	9	NNC	ENSG00000105676.14	novel	2461	9	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_8	194.830695733501	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGGAGGGGTCTCTTCCA	-8	True	NA	15	True	AATAAA	-16	NA	19033663	19058171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057392
transcript_47385.known	chr19	+	2461	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	152.687129041711	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	-10	True	NA	20	True	AATAAA	-21	NA	19033602	19058176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_47387.nnic	chr19	+	2412	8	NNC	ENSG00000105676.14	novel	2383	8	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	165.501341014359	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGGAGGGGTCTCTTCCA	870	False	NA	15	True	AATAAA	-16	NA	19033561	19058171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057392
transcript_47388.known	chr19	+	2383	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	59.1801124896338	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCTTCCATAGCTTG	883	False	NA	22	True	AATAAA	-23	NA	19033574	19058178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_47391.known	chr19	+	2412	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	136.592048652555	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	-3	True	NA	3	True	AATAAA	-4	NA	19033609	19058159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_47394.nnic	chr19	+	1015	4	NNC	ENSG00000105676.14	novel	1318	5	NA	NA	-13	-1568	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	190.571654648732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	870	False	NA	3	True	AATAAA	-14	NA	19033561	19050061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19049665
transcript_4740.known	chr1	+	949	3	FSM	ENSG00000162616.9	ENST00000487931.1	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	51	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGGCACTGAAAATATA	3	True	NA	NA	False	AATGAA	-22	NA	77979174	78016274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_77979294_78013050_78013620_78016013
transcript_47400.nic	chr19	-	1789	12	NIC	ENSG00000064545.15	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	107.827379647532	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-21	True	NA	-3	True	AATAAA	-25	NA	19138493	19119614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138456
transcript_47401.nic	chr19	-	1847	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	107.827379647532	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19	True	NA	-3	True	AATAAA	-25	NA	19138491	19119614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134917_19138425
transcript_47403.nic	chr19	-	1716	11	NIC	ENSG00000064545.15	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	109.2426656577	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-21	True	NA	-3	True	AATAAA	-25	NA	19138493	19119614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19138425
transcript_47413.known	chr19	-	1754	12	FSM	ENSG00000064545.15	ENST00000587985.6	1754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	112.893718760333	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATGCCGATTTTTAC	10	True	NA	-28	True	NA	NA	NA	19138462	19119639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121317_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_47414.known	chr19	-	1654	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	108.452830894014	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTTCTGAACAAATAA	25	True	NA	-48	True	NA	NA	NA	19138447	19119659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_47415.known	chr19	-	1923	11	FSM	ENSG00000064545.15	ENST00000587406.5	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_10	48.2344275388441	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-21	True	NA	-3	True	AATAAA	-25	NA	19138493	19119614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_47419.known	chr19	+	1376	10	FSM	ENSG00000064490.14	ENST00000303088.9	1376	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	102.301056557787	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	3	True	NA	22	True	AATAAA	-15	NA	19192257	19201866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_47423.known	chr19	+	1212	9	FSM	ENSG00000064490.14	ENST00000407360.7	1212	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	70.5775282933598	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGACAGGTGGTGGG	508	False	NA	-42	True	NA	NA	NA	19192762	19201802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_47425.nic	chr19	+	1303	9	NIC	ENSG00000064490.14	novel	1376	10	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	230	junction_2	40.2212630333758	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	478	False	NA	22	True	AATAAA	-15	NA	19192732	19201866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_4743.nic	chr1	+	2117	3	NIC	ENSG00000162616.9	novel	949	3	NA	NA	-14	-756	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	55.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCAACTACTTGTT	-1	True	NA	7	True	AATAAA	-21	NA	77979266	78017208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78013050_78013620_78016013
transcript_47435.known	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	119.481533027886	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	84	False	NA	22	True	AATAAA	-15	NA	19192910	19201866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_4744.nic	chr1	+	2227	3	NIC	ENSG00000162616.9	novel	949	3	NA	NA	-14	-646	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	55.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	-1	True	NA	16	True	AATATA	-20	NA	77979266	78017318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_77979620_78013050_78013620_78016013
transcript_47441.known	chr19	-	992	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	32.9933326597966	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-9	True	NA	-4	True	NA	NA	NA	19192152	19176905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_47443.known	chr19	-	859	6	FSM	ENSG00000184162.15	ENST00000420605.7	859	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.2363857861548	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAATGTGTGAATTGTG	44	True	NA	-7	True	TATAAA	-15	NA	19203357	19201415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19201564_19201930_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_47446.known	chr19	-	1290	5	FSM	ENSG00000184162.15	ENST00000331552.12	1290	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.5452186216786	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-13	True	NA	0	True	TATAAA	-22	NA	19203414	19201408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_47449.known	chr19	-	801	4	FSM	ENSG00000254901.8	ENST00000585679.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	54.3507129668048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	4	True	NA	-4	True	NA	NA	NA	19192139	19176905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19192080
transcript_47450.known	chr19	-	1489	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	9.67241208569794	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACTCATGTGCCAGGA	NA	False	NA	-9	True	AATAAA	-13	NA	19192589	19181881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
transcript_47452.known	chr19	-	899	4	FSM	ENSG00000184162.15	ENST00000544883.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.6923022759522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGAAAAGGTGGGCTGT	42	True	NA	NA	False	NA	NA	NA	19203359	19201638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202042_19202330_19202399_19202790_19202882_19203022
transcript_47454.known	chr19	-	891	4	FSM	ENSG00000184162.15	ENST00000538165.2	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	12.684198393627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCCACGCTCACACTT	26	True	NA	NA	False	NA	NA	NA	19203375	19202057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202399_19202469_19202576_19202790_19202882_19203022
transcript_47457.known	chr19	-	1565	3	FSM	ENSG00000184162.15	ENST00000537399.1	1565	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTACCAAGCAAAATGT	55	False	NA	-17	True	TATAAA	-5	NA	19203346	19201425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202576_19202790_19202882_19203022
transcript_47458.known	chr19	-	572	2	FSM	ENSG00000254901.8	ENST00000462498.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCATCAGCATCCGGGA	NA	False	NA	NA	False	NA	NA	NA	19192591	19182622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19182684_19192080
transcript_47459.known	chr19	-	375	2	FSM	ENSG00000184162.15	ENST00000539678.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCACCAGTTTCCCTT	557	False	NA	NA	False	NA	NA	NA	19202844	19202077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19202399_19202790
transcript_47460.known	chr19	-	1518	10	FSM	ENSG00000213996.13	ENST00000389363.5	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	11.3311544746506	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGCCTAAGTGTTTC	-22	True	NA	-2	True	AGTAAA	-21	NA	19273301	19264365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268755_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
transcript_47466.nnic	chr19	-	2074	14	NNC	ENSG00000105705.16	novel	2566	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	96.3172150612743	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGTCCTGTT	-8	True	NA	-5	True	AATAAA	-19	NA	19320511	19276514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19303836_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_47467.known	chr19	-	2566	14	FSM	ENSG00000105705.16	ENST00000247001.10	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	55.3902774883525	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCTAAAGGAATGTCA	-6	True	NA	NA	False	AATAAA	-19	NA	19320509	19276032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19303848_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_47468.nic	chr19	-	1962	13	NIC	ENSG00000105705.16	novel	2566	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	94.4999632569006	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGTCCTGTT	-8	True	NA	-5	True	AATAAA	-19	NA	19320511	19276514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_4747.known	chr1	+	2903	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	52.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	-2	True	NA	12	True	TATAAA	-16	NA	78004938	78017964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_78005322_78013050_78013620_78016013
transcript_47473.known	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	8400	junction_3	131.575073627188	3142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	-4	True	NA	23	True	AATAAA	-17	NA	19516224	19528198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
transcript_47475.known	chr19	+	1166	5	FSM	ENSG00000186010.19	ENST00000502506.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3695.07510072529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGTTTTCCTGGGG	-8	True	NA	22	True	AATAAA	-16	NA	19515735	19528197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526024_19526261_19527280_19527353_19527700_19527771_19528006
transcript_47476.known	chr19	+	576	4	FSM	ENSG00000186010.19	ENST00000428459.6	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	8400	junction_3	144.148072018556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACAACCCGCTGGGTG	1	True	NA	NA	False	NA	NA	NA	19516229	19528022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700
transcript_47479.known	chr19	+	593	3	FSM	ENSG00000186010.19	ENST00000511180.4	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	8552	junction_2	100	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGATGCTTCGGGAG	12	False	NA	NA	False	NA	NA	NA	19516240	19527702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19516333_19526181_19526261_19527280
transcript_47481.nic	chr19	-	2096	5	ISM	ENSG00000064547.14	ENST00000542587.5	2546	6	710	0	0	0	3prime_fragment	FALSE	canonical	0	0	junction_3	97.7061922295614	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	0	True	NA	-33	True	AGTAAA	-16	NA	19628220	19623668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091
transcript_47483.nnic	chr19	-	1877	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	106.032489779732	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19	True	NA	-33	True	AGTAAA	-16	NA	19628553	19623668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_19624570_19626542_19627285_19627396_19627505_19628427
transcript_47486.known	chr19	-	1786	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	99.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	0	True	NA	-19	True	AGTAAA	-30	NA	19628220	19623654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19624570_19626542_19627285_19628091
transcript_47491.nnic	chr19	+	2513	5	NNC	ENSG00000181896.12	novel	4642	4	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	24.7032386540712	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCCCTTCTGTTCATT	-10	True	NA	20	True	AATAAA	-20	NA	19668783	19683506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180_19680248_19682431
transcript_47492.nnic	chr19	+	1999	5	NNC	ENSG00000181896.12	novel	4642	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.7032386540712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCCCTTCTGTTCATT	-10	True	NA	20	True	AATAAA	-20	NA	19668783	19683506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180_19680363_19683060
transcript_47494.nic	chr19	+	2651	5	NIC	ENSG00000181896.12	novel	4642	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	24.7032386540712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCCCTTCTGTTCATT	-10	True	NA	20	True	AATAAA	-20	NA	19668783	19683506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180_19680386_19682431
transcript_47496.known	chr19	+	1152	4	FSM	ENSG00000181896.12	ENST00000444249.6	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	17.1075032271418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	15	True	NA	12	True	AATAAA	-18	NA	19668850	19680032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19668967_19677863_19677987_19678725_19678787_19679180
transcript_47498.known	chr19	-	2963	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	1.63299316185545	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATAACATTTTTCTT	-7	True	NA	-21	True	AATAAA	-15	NA	19733112	19710471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
transcript_4750.known	chr1	-	209	1	FSM	ENSG00000273338.1	ENST00000608684.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTAAACATGATTTTAG	-1	True	NA	NA	False	AATAAA	-31	NA	78004554	78004345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_78004300_78004600
transcript_47503.nnic	chr19	+	831	4	NNC	ENSG00000267419.3	novel	803	5	NA	NA	-24	5499	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	6.18241233033047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTCTGAAAGATTTT	-31	True	NA	23	True	AATAAA	-19	NA	19776561	19793606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19776995_19786608_19786692_19789679_19789822_19793433
transcript_47506.known	chr19	-	3323	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	4.32049379893857	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAGAGTAATAGTTT	-18	True	NA	NA	False	AATAAA	-16	NA	19821750	19792710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
transcript_47508.known	chr19	+	447	2	FSM	ENSG00000267419.3	ENST00000586924.2	709	2	238	24	188	-24	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAAAATCAGTGAGA	-5	True	NA	NA	False	AATAAA	-4	NA	19776823	19786884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19776995_19786608
transcript_47509.known	chr19	-	432	3	FSM	ENSG00000266904.7	ENST00000589508.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGAATCACTTTATAG	19	False	NA	NA	False	AATACA	-24	NA	19776385	19761157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_19761422_19762537_19762647_19776326
transcript_4751.known	chr1	+	5429	3	FSM	ENSG00000122420.10	ENST00000370757.8	5429	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTTTGCACTTTTAA	-41	True	NA	NA	False	AATAAA	-20	NA	78490973	78540701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_78491237_78492671_78493542_78536405
transcript_47512.known	chr19	+	3542	4	FSM	ENSG00000256771.5	ENST00000589717.2	3542	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	16.062378404209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGTTTCAGAGTAATG	-6	True	NA	NA	False	GATAAA	-7	NA	19865881	19894674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473
transcript_47519.known	chr19	+	820	3	FSM	ENSG00000256771.5	ENST00000592725.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	67	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAGAAACCCTACAAAT	-2	True	NA	NA	False	NA	NA	NA	19865885	19892083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19866000_19880050_19880147_19891473
transcript_4752.nnic	chr1	-	764	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-4	-287693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTCTGTGTATGC	-3	True	NA	NA	False	AATAAA	-38	NA	82848209	82823696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_82824283_82833947_82834060_82848143
transcript_47522.nnic	chr19	+	402	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-33	-6317	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTAAGTCCTTTTGAT	2	True	NA	4	True	AATAAA	-15	NA	19865848	19872378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19866000_19872127
transcript_47524.nnic	chr19	+	814	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-33	-5905	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGTGTCAGCTTTT	2	True	NA	NA	False	AATAAA	-14	NA	19865848	19872790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_19866000_19872127
transcript_47525.known	chr19	+	2268	2	FSM	ENSG00000256771.5	ENST00000355650.4	2268	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGCCTACTCACATCTT	-6	True	NA	20	True	AATACA	-19	NA	19865906	19893648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19866000_19891473
transcript_47529.known	chr19	+	1334	4	FSM	ENSG00000184635.16	ENST00000592160.5	1334	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	133.247472354596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCCATTTTGGTTT	-8	True	NA	NA	False	NA	NA	NA	19900970	19932997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19932007
transcript_47531.known	chr19	+	2763	4	FSM	ENSG00000184635.16	ENST00000343769.6	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	14.1656862405839	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTTGCTGTTTGTA	-3	True	NA	NA	False	AATAAA	-20	NA	19900945	19935575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19933181
transcript_47535.known	chr19	+	570	3	FSM	ENSG00000184635.16	ENST00000588146.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAACCCTTATAACACATA	-3	True	NA	NA	False	NA	NA	NA	19900945	19933509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_19901092_19916559_19916656_19933181
transcript_4754.known	chr1	-	1601	1	FSM	ENSG00000271576.1	ENST00000605506.1	1601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTGCATAATTTG	-15	True	NA	-17	True	AATAAA	-19	NA	84077931	84076330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84076300_84077900
transcript_47541.nic	chr19	-	878	5	NIC	ENSG00000197124.12	novel	581	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1128641424317	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	-5	True	NA	-5	True	AATAAA	-21	NA	20039534	20004419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_20004748_20007140_20007276_20023003_20023100_20024249_20024377_20039342
transcript_47543.known	chr19	-	609	4	FSM	ENSG00000197124.12	ENST00000601100.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	42.7629122799964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTTTTCAAATGTATG	253	False	NA	NA	False	AGTAAA	-41	NA	20039276	20006993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039172
transcript_47544.known	chr19	-	3244	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	9.7410927974683	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	-3	True	NA	-3	True	AATAAA	-23	NA	20039505	20004417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
transcript_47545.nic	chr19	-	743	4	NIC	ENSG00000197124.12	novel	3244	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.8510515453766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	-5	True	NA	-5	True	AATAAA	-21	NA	20039534	20004419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_20004748_20023003_20023100_20024249_20024377_20039342
transcript_4755.known	chr1	+	4513	10	FSM	ENSG00000142875.20	ENST00000370689.6	4513	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	19.6299091524473	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCGTGAATTCT	-10	True	NA	23	True	ATTAAA	-23	NA	84078061	84238498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84214152_84214318_84235179
transcript_47566.nnic	chr19	-	1028	2	ISM	ENSG00000267383.8	ENST00000693630.1	520	3	-32	31962	-6	-322	5prime_fragment	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGATTTTGACTGC	NA	False	NA	NA	False	NA	NA	NA	20238466	20216467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_20217317_20238287
transcript_47567.known	chr19	-	618	2	FSM	ENSG00000267383.8	ENST00000585816.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGCCACAAAGATACTC	13	True	NA	NA	False	AATACA	-2	NA	20238431	20228009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20228484_20238287
transcript_47571.known	chr19	+	1918	6	FSM	ENSG00000213988.11	ENST00000469078.5	1918	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	108.884158627415	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	1	True	NA	5	True	TATAAA	-5	NA	20077993	20127018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20121221_20121347_20125005_20126167_20126751
transcript_47573.nic	chr19	+	1818	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	108.113366426173	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	-24	True	NA	5	True	TATAAA	-5	NA	20077968	20127018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20125005_20126167_20126751
transcript_47577.nnic	chr19	+	976	4	NNC	ENSG00000213988.11	novel	3744	4	NA	NA	-25	-2762	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	128.536203287461	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCTCTTGATTGGAAA	-24	True	NA	5	True	AATAAA	-15	NA	20077968	20115282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20078136_20104238_20104366_20105220_20105317_20114696
transcript_47578.known	chr19	+	3744	4	FSM	ENSG00000213988.11	ENST00000418063.3	3744	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	55.4156014935225	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	7	True	NA	5	True	AATAAA	-19	NA	20077999	20121165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780
transcript_47579.nnic	chr19	+	668	4	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-25	11	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	121.013314235344	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCATTTCTCTGTCTTT	-24	True	NA	16	True	TATAAA	-16	NA	20077968	20127029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20126751
transcript_4758.known	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	48.8042966858452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	1	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
transcript_47580.known	chr19	+	1724	4	FSM	ENSG00000213988.11	ENST00000474284.1	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	26.3986531642978	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTTGAAATTTCCT	1	True	NA	63	True	NA	NA	NA	20077993	20127076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20078136_20105220_20105317_20125005_20126167_20126751
transcript_47581.nic	chr19	+	3638	3	NIC	ENSG00000213988.11	novel	3744	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	62	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	-14	True	NA	5	True	AATAAA	-19	NA	20077978	20121165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20078136_20105220_20105317_20117780
transcript_47583.known	chr19	+	734	4	FSM	ENSG00000256229.8	ENST00000597083.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	43.3666538560063	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTCTCTCACCCTCGAC	13	False	NA	NA	False	ATTAAA	-17	NA	20167227	20188776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20188398
transcript_47584.nnic	chr19	+	1576	4	NNC	ENSG00000256229.8	novel	3895	4	NA	NA	-18	1477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.2228021309163	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAATATGTTGAATCAGA	10	False	NA	5	True	AATAAA	-18	NA	20167195	20190253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20167361_20184355_20184483_20185986_20186083_20189065
transcript_47585.nnic	chr19	+	1554	4	NNC	ENSG00000256229.8	novel	3895	4	NA	NA	-18	1483	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	49.9355139710763	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAATCAGAGTGTTT	10	False	NA	11	True	AATAAA	-24	NA	20167195	20190259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20167361_20184355_20184483_20185986_20186083_20189093
transcript_47587.nnic	chr19	+	1191	4	NNC	ENSG00000256229.8	novel	3895	4	NA	NA	-18	1480	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	52.2834156837094	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTTGAATCAGAGTG	10	False	NA	8	True	AATAAA	-21	NA	20167195	20190256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20167361_20184355_20184483_20185986_20186083_20189453
transcript_47588.known	chr19	+	3895	4	FSM	ENSG00000256229.8	ENST00000335117.9	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	35.4055865020699	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATTATGTGTGAATTT	-1	True	NA	20	True	AATAAA	-21	NA	20167213	20200488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20196963
transcript_47589.known	chr19	-	1590	1	FSM	ENSG00000280079.1	ENST00000624228.1	1590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTCTCTGTCCCTTT	1751	False	NA	-17	True	AATAAA	-20	NA	20222186	20220596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20220600_20222200
transcript_4759.known	chr1	+	1567	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	24	True	AATAAA	-17	NA	84298365	84350798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
transcript_47598.nnic	chr19	-	1569	4	FSM	ENSG00000231205.12	ENST00000690249.1	1564	4	-9	4	0	-4	multi-exon	FALSE	canonical	3	28	junction_3	189.034976187536	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATATGTTGAAGAAT	-7	True	NA	-14	True	AATAAA	-17	NA	20424965	20404966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20406133_20408949_20409046_20409829_20409957_20424785
transcript_476.known	chr1	-	508	4	FSM	ENSG00000116251.11	ENST00000465387.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2774.45998749707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	9840	False	NA	NA	False	NA	NA	NA	6199553	6186722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199369
transcript_4760.known	chr1	+	1948	9	FSM	ENSG00000117133.11	ENST00000370654.6	1948	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	22.5662219921723	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCCAGTGTATATAAA	2	True	NA	20	True	AATAAA	-27	NA	84479265	84498352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_84479510_84480955_84481013_84482914_84482996_84489632_84489729_84490318_84490473_84495372_84495456_84495881_84496064_84496243_84496371_84497428
transcript_47603.nnic	chr19	-	1086	4	FSM	ENSG00000231205.12	ENST00000690249.1	1564	4	-9	487	0	0	multi-exon	FALSE	canonical	3	28	junction_3	189.034976187536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-7	True	NA	-3	True	AATATA	-18	NA	20424965	20405449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20406133_20408949_20409046_20409829_20409957_20424785
transcript_47604.nnic	chr19	-	1074	4	NIC	ENSG00000231205.12	novel	1564	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_2	182.746332992545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-4	True	NA	-3	True	AATATA	-18	NA	20424962	20405449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_20406133_20408949_20409046_20417665_20417784_20424785
transcript_47606.known	chr19	-	1004	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	10	106	-1	-4	multi-exon	FALSE	canonical	3	65	junction_1	216.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTTCAGTCTTTTTTT	-1	True	NA	-5	True	ATTAAA	-17	NA	20424959	20340367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20341102_20408949_20409046_20424785
transcript_47607.known	chr19	-	1067	3	FSM	ENSG00000231205.12	ENST00000542380.6	1075	3	1	7	0	-7	multi-exon	FALSE	canonical	3	11	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTCTCTTGATTG	-11	True	NA	-8	True	AATAAA	-11	NA	20424969	20340268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20341102_20375959_20376010_20424785
transcript_47617.known	chr19	-	3330	3	FSM	ENSG00000231205.12	ENST00000615684.4	3330	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	70	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	2	True	NA	-10	True	AATAAA	-14	NA	20424956	20395954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20399039_20408949_20409025_20424785
transcript_47619.nic	chr19	-	1442	3	FSM	ENSG00000231205.12	ENST00000691522.1	938	3	-21	-483	-8	-4	multi-exon	FALSE	canonical	3	78	junction_2	176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATATGTTGAAGAAT	-2	True	NA	-14	True	AATAAA	-17	NA	20424986	20404966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20406133_20408949_20409025_20424785
transcript_47620.known	chr19	-	1446	3	FSM	ENSG00000231205.12	ENST00000597334.2	1464	3	9	9	0	-4	multi-exon	FALSE	canonical	3	430	junction_1	34	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATATGTTGAAGAAT	-11	True	NA	-14	True	AATAAA	-17	NA	20424969	20404966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20406133_20408949_20409046_20424785
transcript_47621.nic	chr19	-	959	3	FSM	ENSG00000231205.12	ENST00000691522.1	938	3	-21	0	-8	0	multi-exon	FALSE	canonical	3	78	junction_2	176	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-2	True	NA	-3	True	AATATA	-18	NA	20424986	20405449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20406133_20408949_20409025_20424785
transcript_47623.known	chr19	-	636	3	FSM	ENSG00000231205.12	ENST00000596724.2	922	3	2	284	0	-284	multi-exon	FALSE	canonical	3	21	junction_1	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAGTAGCTATAAAGTA	2	True	NA	NA	False	NA	NA	NA	20424956	20415304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20415652_20417665_20417784_20424785
transcript_47626.nnic	chr19	+	3003	2	Antisense	novelGene_ENSG00000231205.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1256	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATAAAAGAAAATCAAGCC	-2	True	NA	-72	True	NA	NA	NA	20362471	20371857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr19_+_20362795_20369177
transcript_47628.nnic	chr19	+	3204	2	Antisense	novelGene_ENSG00000231205.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1256	junction_1	0	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAAGTGTGGCGTTTTC	4204	False	NA	24	True	AATAAA	-15	NA	20362366	20371953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr19_+_20362795_20369177
transcript_47636.nnic	chr19	-	977	5	NNC	ENSG00000237440.9	novel	544	5	NA	NA	-3	3535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5978514723404	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTCTATGATCATA	7	False	NA	-5	True	ATTAAA	-16	NA	20565812	20541774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20542313_20545935_20545977_20552474_20552571_20553708_20553836_20565637
transcript_47637.nnic	chr19	-	3103	5	NNC	ENSG00000237440.9	novel	544	5	NA	NA	-3	3535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5978514723404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTCTATGATCATA	7	False	NA	-5	True	ATTAAA	-16	NA	20565812	20541774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20542455_20543951_20545977_20552474_20552571_20553708_20553836_20565637
transcript_47639.known	chr19	-	8352	4	FSM	ENSG00000237440.9	ENST00000427401.9	8352	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCCTCAGAAAAGCTTT	-1	True	NA	0	True	AATAAA	-16	NA	20565781	20537991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20545977_20552474_20552571_20553708_20553836_20565637
transcript_47643.nnic	chr19	-	959	4	NNC	ENSG00000269110.1	novel	522	5	NA	NA	95771	6214	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	27.6204433144888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTTTCAACTTCAT	7	False	NA	-18	True	AATAAA	-19	NA	20565812	20547577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_20548139_20552474_20552571_20553708_20553836_20565637
transcript_47644.known	chr19	-	872	3	FSM	ENSG00000237440.9	ENST00000594419.1	872	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTTACTGCGCATAAGA	73	False	NA	NA	False	NA	NA	NA	20565746	20545309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20545977_20552474_20552571_20565637
transcript_47645.known	chr19	-	1123	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	27.4752413799932	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAATGGATTTATTT	-15	True	NA	-7	True	AATATA	-16	NA	20661596	20644701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
transcript_47652.known	chr19	+	757	4	FSM	ENSG00000160229.13	ENST00000594534.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.79271573232759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATATTTATAACATT	8	True	NA	NA	False	TATAAA	-1	NA	20776309	20799393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20799000
transcript_47653.known	chr19	+	4539	4	FSM	ENSG00000160229.13	ENST00000344519.10	4539	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	12.1928941054479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATGGAAAACAAACAAAA	2	True	NA	NA	False	AATAAA	-24	NA	20776303	20809995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20805826
transcript_47654.nnic	chr19	+	657	3	NNC	ENSG00000160229.13	novel	4539	4	NA	NA	-30	-1512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAATTTCTTCA	NA	False	NA	NA	False	AAGAAA	-10	NA	20776273	20793085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_20776451_20792511_20792639_20792732
transcript_47657.nic	chr19	+	2403	5	NIC	ENSG00000105750.15	novel	483	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	39.9898424603048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAGCATTCAG	NA	False	NA	14	True	AATAAA	-17	NA	20923221	20950697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_20923404_20934023_20934151_20934948_20935048_20946299_20946341_20948743
transcript_47658.known	chr19	+	483	5	FSM	ENSG00000105750.15	ENST00000601284.5	483	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	40.7768316572046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTCTTTCCAAAAAGTG	-8	True	NA	NA	False	AATATA	-2	NA	20923284	20948791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20946299_20946390_20948743
transcript_4766.known	chr1	-	6571	7	FSM	ENSG00000117151.13	ENST00000370630.6	6571	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	13.4339950209244	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCTGTCTCAAAAAA	6	True	NA	-3	True	AATAAA	-20	NA	84574440	84549610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84574238
transcript_47660.known	chr19	+	1531	4	FSM	ENSG00000105750.15	ENST00000300540.7	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	27.3130005674953	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTTATTTGACTCTA	-17	True	NA	13	True	AATAAA	-21	NA	20923275	20943977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20942800
transcript_47664.known	chr19	+	2333	4	FSM	ENSG00000105750.15	ENST00000328178.13	2333	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	16.3095064303001	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAGCATTCAG	-4	True	NA	14	True	AATAAA	-17	NA	20923250	20950697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20948743
transcript_47666.known	chr19	+	1259	4	FSM	ENSG00000105750.15	ENST00000596476.1	1259	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.0689515339624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCACTTTTGTCAATA	17	False	NA	NA	False	ATTAAA	-45	NA	20923309	20943726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923417_20934023_20934151_20934948_20935048_20942800
transcript_47668.known	chr19	+	1689	3	FSM	ENSG00000105750.15	ENST00000345030.6	1689	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGGCAAAGCTTTAA	108	False	NA	NA	False	ACTAAA	-40	NA	20923400	20950302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20948743
transcript_47669.known	chr19	+	549	3	FSM	ENSG00000105750.15	ENST00000599885.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	26	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACTAGAGTAAA	11	True	NA	NA	False	NA	NA	NA	20923303	20949093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934948_20935048_20948743
transcript_47670.known	chr19	+	506	4	FSM	ENSG00000105750.15	ENST00000601924.5	506	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	37.2767428238514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGAGGTTGTAATGGA	-2	True	NA	NA	False	AAGAAA	-33	NA	20923252	20948893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_20923404_20934023_20934151_20934969_20935048_20948743
transcript_47671.known	chr19	+	3886	5	FSM	ENSG00000118620.13	ENST00000261560.10	3886	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	7.66077672302228	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGTTATGTGTGGTTA	-1	True	NA	8	True	AATAAA	-20	NA	21020656	21060050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21056630
transcript_47673.nic	chr19	+	2321	5	NIC	ENSG00000118620.13	novel	3886	5	NA	NA	-5	14	intron_retention	FALSE	canonical	3	18	junction_3	16.3248277173145	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAATTCATACTGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	21020628	21058460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088_21034185_21056630
transcript_47676.nic	chr19	+	1779	4	ISM	ENSG00000118620.13	ENST00000594110.5	536	5	-21	14098	-5	-1333	5prime_fragment	FALSE	canonical	3	43	junction_3	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTTTTACTTGTGTTC	NA	False	NA	NA	False	TATAAA	-20	NA	21020628	21035469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085
transcript_47684.known	chr19	+	2696	7	FSM	ENSG00000160352.16	ENST00000613286.4	2696	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	37.9297596441985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	0	True	NA	NA	False	NA	NA	NA	21082202	21125094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21109622_21109645_21116806_21118886_21124960
transcript_47687.nic	chr19	+	2149	6	NIC	ENSG00000160352.16	novel	2562	6	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	41.0199951243293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGAAAATTCATACT	-3	True	NA	NA	False	NA	NA	NA	21082199	21118466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21109622_21109645_21116806
transcript_47689.known	chr19	+	2671	6	FSM	ENSG00000160352.16	ENST00000610902.4	2671	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	17.2904597972408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	6	True	NA	NA	False	NA	NA	NA	21082208	21125094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806_21118886_21124960
transcript_47690.nic	chr19	+	2662	6	NIC	ENSG00000160352.16	novel	2671	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	20.5270553173123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	-7	True	NA	NA	False	NA	NA	NA	21082195	21125094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828_21118886_21124960
transcript_47692.nic	chr19	+	2655	6	NIC	ENSG00000160352.16	novel	2696	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	19.9258625911151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	-3	True	NA	NA	False	NA	NA	NA	21082199	21125094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116828_21118886_21124960
transcript_47695.known	chr19	+	8752	5	FSM	ENSG00000160352.16	ENST00000456283.7	8752	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	17.3637553541853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	0	True	NA	NA	False	NA	NA	NA	21082202	21125094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806
transcript_47696.known	chr19	+	2066	5	FSM	ENSG00000160352.16	ENST00000620627.1	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	21.9815263346293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTGGAACGAAACC	15	False	NA	NA	False	AAAAAG	-9	NA	21082249	21118477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828
transcript_47697.nic	chr19	+	2181	5	NIC	ENSG00000160352.16	novel	2562	6	NA	NA	-16	-11	combination_of_known_junctions	FALSE	canonical	3	64	junction_4	15.5402702679201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGAAAATTCATACT	-2	True	NA	NA	False	NA	NA	NA	21082142	21118466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806
transcript_47698.nic	chr19	+	2113	5	NIC	ENSG00000160352.16	novel	2066	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	20.9806458432528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTGGAACGAAACC	-3	True	NA	NA	False	AAAAAG	-9	NA	21082199	21118477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116828
transcript_47700.known	chr19	+	800	5	FSM	ENSG00000160352.16	ENST00000596053.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	34.5036229981722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAATAATATTCTG	29	False	NA	NA	False	NA	NA	NA	21082173	21125270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21124960
transcript_47708.nic	chr19	+	585	4	ISM	ENSG00000160352.16	ENST00000425625.5	2562	6	-60	19911	-16	7216	5prime_fragment	FALSE	canonical	3	69	junction_3	13.9124245031395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	-2	True	NA	NA	False	NA	NA	NA	21082142	21098974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814
transcript_4771.known	chr1	-	920	3	FSM	ENSG00000174021.12	ENST00000370641.3	920	3	0	0	0	0	multi-exon	FALSE	canonical	3	3234	junction_2	84	683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTGCATTATTAT	46	False	NA	-18	True	AATAAA	-14	NA	84506565	84498328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84498549_84501825_84501971_84506010
transcript_47713.known	chr19	+	647	4	FSM	ENSG00000160352.16	ENST00000618008.4	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.0765799460496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAAACCTTTCAAATG	0	True	NA	NA	False	CATAAA	-37	NA	21082202	21117084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21082349_21098184_21098312_21098814_21098911_21116806
transcript_47716.nic	chr19	+	1146	3	NIC	ENSG00000160352.16	novel	898	2	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	40	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	-2	True	NA	14	True	AATAAA	-14	NA	21082142	21091758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_21082349_21083977_21084070_21090910
transcript_47717.nic	chr19	+	1088	3	ISM	ENSG00000160352.16	ENST00000620627.1	2066	5	-107	19503	-16	7216	intron_retention	FALSE	canonical	3	88	junction_2	7.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	-2	True	NA	NA	False	NA	NA	NA	21082142	21098974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21082349_21083977_21084070_21098184
transcript_47724.nic	chr19	+	2071	2	ISM	ENSG00000160352.16	ENST00000620627.1	2066	5	-54	32582	-3	-5863	5prime_fragment	FALSE	canonical	3	103	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCAAAGGAGTATTGC	-7	True	NA	NA	False	NA	NA	NA	21082195	21085895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21082349_21083977
transcript_47725.nic	chr19	+	939	2	ISM	ENSG00000160352.16	ENST00000618008.4	647	4	-3	18110	1	7216	intron_retention	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	-3	True	NA	NA	False	NA	NA	NA	21082199	21098974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21082349_21098184
transcript_47732.nnic	chr19	+	2231	7	NNC	ENSG00000196705.8	novel	1971	6	NA	NA	-19	1910	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.2824730061872	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTGGCTCACGTC	NA	False	NA	97	True	AATAAA	-14	NA	21142004	21186002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21175452_21175475_21182622_21184046_21185714
transcript_47737.nnic	chr19	+	2698	6	NNC	ENSG00000196705.8	novel	1971	6	NA	NA	-19	705	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_3	13.4372616257927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	NA	False	NA	5	True	AATAAA	-17	NA	21142004	21184797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21175452_21175475_21182622
transcript_47738.nnic	chr19	+	3268	6	NNC	ENSG00000196705.8	novel	1971	6	NA	NA	-19	1275	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_3	13.4372616257927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCCTGTTGTTTCTTC	NA	False	NA	35	True	NA	NA	NA	21142004	21185367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21175452_21175475_21182622
transcript_47741.known	chr19	+	1971	6	FSM	ENSG00000196705.8	ENST00000600692.5	1971	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	13.905394636615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCCCAGCATTTTGGG	NA	False	NA	NA	False	ATTAAA	-30	NA	21142023	21184092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21175452_21175475_21182622
transcript_47747.nnic	chr19	+	2676	5	NNC	ENSG00000196705.8	novel	13894	5	NA	NA	-19	705	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	23.9843699104229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	NA	False	NA	5	True	AATAAA	-17	NA	21142004	21184797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21182622
transcript_47748.nnic	chr19	+	3246	5	NNC	ENSG00000196705.8	novel	13894	5	NA	NA	-19	1275	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	23.9843699104229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCCTGTTGTTTCTTC	NA	False	NA	35	True	NA	NA	NA	21142004	21185367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21182622
transcript_4775.known	chr1	-	5752	14	FSM	ENSG00000117155.17	ENST00000342203.8	5752	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	36.7101230738154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTGGAATGAATG	-3	True	NA	NA	False	AATACA	-17	NA	84690461	84643705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
transcript_47751.known	chr19	+	13894	5	FSM	ENSG00000196705.8	ENST00000311048.11	13894	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	24.1764348074732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGGTGTGTGTGTGTG	0	True	NA	NA	False	TATAAA	-16	NA	21142039	21196053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622
transcript_47755.nic	chr19	+	514	2	ISM	ENSG00000196705.8	ENST00000599296.5	586	6	-30	38778	-19	-38778	5prime_fragment	FALSE	canonical	3	80	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	GATAAA	-28	NA	21142004	21143882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21142187_21143550
transcript_47765.known	chr19	+	2442	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	129.44014060561	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	NA	False	NA	6	True	ATTAAA	-10	NA	21358929	21379300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
transcript_47769.known	chr19	+	747	5	FSM	ENSG00000172687.14	ENST00000597810.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	162.699685002768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTTTTAATATGATTT	14	True	NA	NA	False	AAGAAA	-38	NA	21359010	21378310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378012
transcript_47770.known	chr19	+	1142	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	88.4911718760691	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	-5	True	NA	8	True	ATTAAA	-12	NA	21358991	21379302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
transcript_47772.nnic	chr19	+	606	5	NNC	ENSG00000172687.14	novel	2442	5	NA	NA	2	379	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	177.395567870226	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTGTGTTTTTTAAA	NA	False	NA	11	True	AATAAA	-17	NA	21358931	21379681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21379603
transcript_47773.known	chr19	+	6177	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	162.699685002768	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	3	True	NA	15	True	AATAAA	-25	NA	21358999	21388582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
transcript_4778.nic	chr1	-	2154	14	NIC	ENSG00000117155.17	novel	2457	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_13	49.1346417281278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGATGGTCTGAGTT	-3	True	NA	-5	True	CATAAA	-17	NA	84690281	84647340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690153
transcript_47781.nic	chr19	+	592	4	ISM	ENSG00000172687.14	ENST00000597810.5	747	5	-79	2282	2	-396	5prime_fragment	FALSE	canonical	3	403	junction_1	11.7756811551038	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCCTATAATGTGATT	NA	False	NA	NA	False	AAAACA	-43	NA	21358931	21376028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868
transcript_47788.nnic	chr19	+	2454	6	NNC	ENSG00000197013.11	novel	4785	4	NA	NA	-3	1624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.4004219390503	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGCCAGGCGTGG	-9	True	NA	NA	False	AATACA	-14	NA	21505598	21538123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21505775_21527389_21527512_21529083_21529173_21529657_21529785_21530588_21530685_21536279
transcript_47791.nnic	chr19	+	2365	5	NNC	ENSG00000197013.11	novel	4785	4	NA	NA	-3	1624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.6808564740988	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGCCAGGCGTGG	-9	True	NA	NA	False	AATACA	-14	NA	21505598	21538123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_21505775_21527389_21527512_21529657_21529785_21530588_21530685_21536279
transcript_47793.known	chr19	-	967	5	FSM	ENSG00000268119.7	ENST00000600469.7	1443	5	31	445	11	-288	multi-exon	FALSE	canonical	3	11	junction_1	76.1950621759704	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTTATTATGCCACAAAC	20	True	NA	NA	False	NA	NA	NA	21463873	21452888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21453280_21453549_21453778_21454382_21454473_21456460_21456589_21463743
transcript_47796.known	chr19	+	1536	4	FSM	ENSG00000196268.12	ENST00000594390.5	1536	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.42809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	6	True	NA	52	True	AATAAA	-15	NA	21397132	21414643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21413465
transcript_47797.known	chr19	+	4785	4	FSM	ENSG00000197013.11	ENST00000358491.9	4785	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	32.2937902527543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	-6	True	NA	13	True	AATAAA	-20	NA	21505601	21540668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21505775_21529657_21529785_21530588_21530685_21536279
transcript_47801.nnic	chr19	-	3329	4	NNC	ENSG00000268119.7	novel	1916	5	NA	NA	-36	-1876	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	79.3403358254103	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTAGAATCACAAATAATG	NA	False	NA	-4	True	AATAAA	-34	NA	21463944	21446116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_21449027_21454382_21454473_21456460_21456589_21463743
transcript_47802.nnic	chr19	-	981	4	NIC	ENSG00000268119.7	novel	1916	5	NA	NA	-36	-765	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	80.2786812713479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAAAGAAAATTAGCAG	NA	False	NA	NA	False	AAGAAA	-3	NA	21463944	21448815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_21449378_21454382_21454473_21456460_21456589_21463743
transcript_47803.known	chr19	-	1581	4	FSM	ENSG00000268119.7	ENST00000599993.7	1736	4	12	143	1	33	multi-exon	FALSE	canonical	3	81	junction_1	51.7322164827897	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTATGTTTTATAATCC	-3	True	NA	NA	False	NA	NA	NA	21463896	21452567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21453778_21454382_21454473_21456460_21456589_21463743
transcript_47804.nnic	chr19	-	1250	4	NIC	ENSG00000268119.7	novel	1443	5	NA	NA	-36	-5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	85.4413379004696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTCATTGTTAAATTC	NA	False	NA	-22	True	AATAAA	-20	NA	21463944	21452448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_21453280_21454382_21454473_21456460_21456589_21463743
transcript_47807.known	chr19	+	681	3	FSM	ENSG00000197013.11	ENST00000596237.5	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAGAAAGATATATATA	-4	True	NA	NA	False	NA	NA	NA	21505603	21518988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21505775_21505984_21506081_21518574
transcript_47809.known	chr19	-	803	3	FSM	ENSG00000268119.7	ENST00000663704.1	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCATTCAACTCTGAA	5	True	NA	NA	False	AATACA	-22	NA	21463888	21453942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21454473_21456460_21456589_21463743
transcript_47812.nic	chr19	+	958	2	ISM	ENSG00000196268.12	ENST00000339914.6	1665	4	-52	2877	-15	86	intron_retention	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCCAGTCCTGGCC	NA	False	NA	NA	False	TTTAAA	-13	NA	21397103	21405922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_21397268_21405128
transcript_47813.known	chr19	+	4386	2	FSM	ENSG00000196268.12	ENST00000355504.4	4386	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTAAGTGGAGAGGTT	6	True	NA	2	True	ATTAAA	-18	NA	21397132	21427163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_21397268_21422912
transcript_47816.known	chr19	-	5691	5	FSM	ENSG00000197020.12	ENST00000358296.11	5691	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	20.0296654989543	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAATTTTTTTTTTTC	-6	True	NA	NA	False	AATAAA	-5	NA	21767579	21722770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21727990_21744016_21744116_21744940_21745068_21765693_21765787_21767426
transcript_47818.known	chr19	-	5584	7	FSM	ENSG00000198521.12	ENST00000594012.5	5584	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	51.1427740089774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTGGTATATATTTT	24	True	NA	-26	True	AATAAA	-25	NA	21852017	21804949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21850937_21851028_21851904
transcript_47823.known	chr19	-	5235	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	54.3507129668048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTATATATTTTTCTT	-1	True	NA	-22	True	AATAAA	-29	NA	21836182	21804945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
transcript_47824.known	chr19	-	5249	4	FSM	ENSG00000198521.12	ENST00000357491.10	5249	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	63.4787803565535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGGTATATATTTTT	-27	True	NA	-25	True	AATAAA	-26	NA	21852068	21804948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21851904
transcript_4784.known	chr1	-	3044	14	FSM	ENSG00000153898.13	ENST00000370608.8	3044	14	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	2.26629536348557	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATTCTTACTATTTT	-13	True	NA	-6	True	AATAAA	-19	NA	84997113	84925582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_84926722_84929557_84929680_84931361_84931569_84937754_84937878_84937980_84938083_84939552_84939703_84940878_84940992_84947032_84947133_84952242_84952340_84952445_84952531_84956430_84956585_84958528_84958703_84965548_84965709_84996795
transcript_47848.nic	chr19	+	1122	4	Fusion	ENSG00000267886.1_ENSG00000183850.14	novel	792	3	NA	NA	-36	0	multi-exon	FALSE	canonical	3	11	junction_3	41.9629466182832	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGTCACAATCTTTATA	NA	False	NA	-5	True	ATTAAA	-7	NA	23075164	23144249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_+_23075388_23134079_23134207_23135947_23136044_23143573
transcript_47852.nnic	chr19	+	575	4	NIC	ENSG00000183850.14	novel	464	3	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	31.8573208052543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	NA	False	NA	NA	False	AATACA	-45	NA	23075172	23136106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_23075388_23098339_23098414_23134079_23134207_23135947
transcript_47857.known	chr19	+	2326	4	FSM	ENSG00000183850.14	ENST00000597761.7	2326	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	28.3117564901148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTCCAAAGATTTTTT	-3	True	NA	5	True	AATAAA	-17	NA	23117024	23147221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_23117177_23134079_23134207_23135947_23136044_23145270
transcript_4786.known	chr1	-	2810	13	FSM	ENSG00000055732.13	ENST00000370589.7	2810	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.74341649025257	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-22	True	NA	NA	False	ATTAAA	-17	NA	85048500	85018081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85048395
transcript_47862.known	chr19	+	464	3	FSM	ENSG00000183850.14	ENST00000593635.1	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	44	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	-13	True	NA	NA	False	AATACA	-45	NA	23075209	23136106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_23075388_23134079_23134207_23135947
transcript_47863.known	chr19	+	563	3	FSM	ENSG00000267886.1	ENST00000600223.1	563	3	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTAGGAAAATGAGGAA	-12	True	NA	NA	False	AATAGA	-20	NA	23075210	23100361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_23075388_23098339_23098414_23100049
transcript_4787.known	chr1	-	3391	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	109.77552854196	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-13	True	NA	-10	True	ATTAAA	-16	NA	85259672	85249952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
transcript_47870.nnic	chr19	-	2385	6	Fusion	ENSG00000284428.1_ENSG00000269837.1	novel	556	5	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	26.2876396810364	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGACCCTTAGTCGAC	-27	True	NA	-7	True	AATAAA	-20	NA	23274251	23255052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_23255572_23258697_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
transcript_47875.nnic	chr19	-	2015	5	NNC	ENSG00000196081.10	novel	583	5	NA	NA	-6	2340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1009478460092	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCCTCTCTGCCTGC	-28	True	NA	-7	True	AATAAA	-24	NA	23250400	23219258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_23219417_23222545_23224019_23231265_23231362_23232166_23232294_23250239
transcript_47877.nnic	chr19	-	1220	5	NNC	ENSG00000196081.10	novel	583	5	NA	NA	-6	2301	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.1009478460092	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGTATTTTAATAAATTTC	-28	True	NA	2	True	AATAAA	-25	NA	23250400	23219297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_23219410_23223294_23224019_23231265_23231362_23232166_23232294_23250239
transcript_47880.nnic	chr19	-	2307	5	Fusion	ENSG00000284428.1_ENSG00000269837.1	novel	556	5	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	28.4198434196953	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGACCCTTAGTCGAC	-24	True	NA	-7	True	AATAAA	-20	NA	23274248	23255052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_23255572_23258697_23260117_23260863_23260935_23261619_23261745_23274075
transcript_47881.known	chr19	-	556	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	18.6731759484026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-20	True	NA	-45	True	NA	NA	NA	23274244	23260000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
transcript_47887.known	chr19	-	2798	4	FSM	ENSG00000196081.10	ENST00000418100.6	2798	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	8.04155872120988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAACTAAT	-22	True	NA	NA	False	NA	NA	NA	23250394	23221598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23250239
transcript_47891.known	chr19	-	583	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	18.4089350286454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTTGTCCTATG	-27	True	NA	50	True	NA	NA	NA	23274251	23259905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
transcript_47894.known	chr19	-	561	4	FSM	ENSG00000284428.1	ENST00000640517.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	21.2759645296439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTTTTCTTTG	-8	True	NA	NA	False	NA	NA	NA	23274232	23260730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260935_23261619_23261745_23270217_23270293_23274075
transcript_4790.known	chr1	-	3254	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	116	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-3	True	NA	-10	True	ATTAAA	-16	NA	85259662	85249952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85252703_85258523_85258723_85259357
transcript_47900.known	chr19	-	574	3	FSM	ENSG00000284428.1	ENST00000638822.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	22.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCGCAACCTCCGCCT	-24	True	NA	NA	False	NA	NA	NA	23274248	23260658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23260935_23261619_23261745_23274075
transcript_47901.known	chr19	-	579	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23	True	NA	-1	True	AATAAA	-19	NA	23274247	23269885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23270293_23274075
transcript_47903.known	chr19	-	5400	4	FSM	ENSG00000167232.14	ENST00000300619.12	5400	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGAGTCCCGAATAA	-18	True	NA	-8	True	AATAAA	-31	NA	23395471	23357695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23362726_23373741_23373838_23374637_23374765_23395324
transcript_4795.nnic	chr1	-	1982	4	NNC	ENSG00000142867.14	novel	2833	3	NA	NA	-44	-472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.4777277644883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTATTTTGGAGTT	54	True	NA	-9	True	AATAAA	-15	NA	85276500	85266247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_85266845_85267091_85267983_85270617_85270907_85276295
transcript_47953.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601293.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	63.8957484240279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCACAAATAGGATTGT	-22	True	NA	NA	False	NA	NA	NA	23416075	23400986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23415893
transcript_47954.known	chr19	-	572	3	FSM	ENSG00000269416.7	ENST00000598922.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	58	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCTGGGCCCAGCAA	-12	True	NA	NA	False	NA	NA	NA	23416065	23402416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23402513_23403205_23403510_23415893
transcript_47955.known	chr19	-	2387	5	FSM	ENSG00000269416.7	ENST00000600643.5	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	49.0681923449397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACATGTTGGCGTGGCT	-18	True	NA	NA	False	ATTAAA	-12	NA	23416071	23399232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257_23405336_23415893
transcript_47958.known	chr19	-	2311	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	3.39934634239519	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	0	True	NA	96	True	CATAAA	-22	NA	23687212	23652800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
transcript_4796.known	chr1	-	776	3	FSM	ENSG00000142867.14	ENST00000620248.2	776	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	68	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTTTTAATTTTT	-8	True	NA	NA	False	NA	NA	NA	85276456	85267623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85267950_85270617_85270907_85276295
transcript_47960.known	chr19	-	6497	4	FSM	ENSG00000196172.9	ENST00000402377.3	6497	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTCCATTGTGTATAT	-1	True	NA	NA	False	AATAAA	-22	NA	23758891	23739194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_23745324_23754822_23754919_23755424_23755552_23758746
transcript_47966.nnic	chr19	+	1426	4	FSM	ENSG00000288920.1	ENST00000484897.4	2140	4	-23	737	2	-737	multi-exon	FALSE	canonical	3	24	junction_3	40.7948798530186	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCTGCAATAATTATG	-18	True	NA	2	True	AATAAA	-28	NA	23762980	23828131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069
transcript_47968.known	chr19	+	1001	4	FSM	ENSG00000288920.1	ENST00000471224.5	1001	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	23.8374122383748	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	23762943	23832196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23831596
transcript_4797.known	chr1	-	2833	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	19	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGGTTTGTGGGTTTTTG	-78	True	NA	NA	False	AATAAA	-18	NA	85276632	85265775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85267983_85270617_85270907_85276295
transcript_47971.nnic	chr19	+	1163	4	NIC	ENSG00000288920.1	novel	1330	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	49.4974746830583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCTCTAATTTTTT	12	True	NA	9	True	AATAAA	-16	NA	23763010	23809515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_23763135_23782371_23782500_23807825_23807940_23808718
transcript_47972.nic	chr19	+	1065	3	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	-23	19353	2	0	5prime_fragment	FALSE	canonical	3	109	junction_2	1.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCTCTAATTTTTT	-18	True	NA	9	True	AATAAA	-16	NA	23762980	23809515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_23763135_23807825_23807940_23808718
transcript_47989.known	chr19	+	4089	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	40.5490101262931	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTAAGTATGTTTG	-6	True	NA	NA	False	AATAAA	-1	NA	24087186	24129968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
transcript_47994.known	chr19	+	3982	3	FSM	ENSG00000213096.11	ENST00000611359.3	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	53	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	2	True	NA	NA	False	ATTAAA	-34	NA	24087159	24129961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24087338_24106547_24106644_24126253
transcript_47996.known	chr19	+	1995	6	FSM	ENSG00000268362.6	ENST00000666101.1	1995	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	32.8475265431052	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCCAGGTGTGGTGATT	3	True	NA	NA	False	AATAAA	-10	NA	24033407	24066749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24033622_24046183_24046280_24048936_24049015_24049404_24049549_24057930_24058107_24065462
transcript_47997.known	chr19	+	511	4	FSM	ENSG00000213096.11	ENST00000339642.10	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	46.4494946749214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	-9	True	NA	12	True	AATAAA	-13	NA	24087183	24107349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24107215
transcript_47999.known	chr19	-	3832	5	FSM	ENSG00000261824.8	ENST00000654098.1	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	27.9508497187474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATTTCCCCAATCAAT	NA	False	NA	NA	False	CATAAA	-22	NA	27793991	27713134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27715859_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_48.known	ERCC-00137	+	521	1	FSM	ERCC-00137A	DQ855000	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00137_+_0_500
transcript_48001.known	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	27.5533573271934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	15	True	NA	-2	True	AATAAA	-27	NA	27793900	27721701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_48002.known	chr19	-	1482	5	FSM	ENSG00000261824.8	ENST00000668068.1	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	27.9508497187474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACTGTGGATGCATC	16	True	NA	NA	False	TATAAA	-21	NA	27793899	27729586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730053_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_48004.known	chr19	-	3429	5	FSM	ENSG00000261824.8	ENST00000657659.2	3517	5	88	0	8	0	multi-exon	FALSE	canonical	3	33	junction_1	18.4983107336859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACTACTTATGAA	81	False	NA	NA	False	AATAAA	-12	NA	27793834	27728229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_48006.known	chr19	-	4842	4	FSM	ENSG00000261824.8	ENST00000656191.1	4842	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	32.2593655651606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAAATTTCTCTCTTT	1	True	NA	NA	False	NA	NA	NA	27793914	27712346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27715859_27732795_27732968_27746097_27746341_27792999
transcript_48007.nic	chr19	-	918	4	FSM	ENSG00000261824.8	ENST00000687807.1	908	4	-10	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	31.7944789057611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	-5	True	NA	-2	True	AATAAA	-27	NA	27793388	27721701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999
transcript_48008.known	chr19	-	3064	4	FSM	ENSG00000261824.8	ENST00000668513.1	3064	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	32.2593655651606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTCTTCTTCTTCT	-15	True	NA	NA	False	ATTAAA	-35	NA	27793398	27727802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730053_27732795_27732968_27746097_27746341_27792999
transcript_48009.known	chr19	-	3731	4	FSM	ENSG00000261824.8	ENST00000661680.2	4262	4	531	0	-3	0	multi-exon	TRUE	canonical	3	33	junction_1	20.7257220756131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-8	True	NA	NA	False	NA	NA	NA	27793391	27727783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999
transcript_48012.known	chr19	-	4005	6	FSM	ENSG00000261824.8	ENST00000666734.1	4005	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.8059694844264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATATCTTGCAATAA	NA	False	NA	NA	False	NA	NA	NA	27793996	27728261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27771543_27771990_27792999_27793233_27793531
transcript_48013.known	chr19	-	2229	3	FSM	ENSG00000261824.8	ENST00000659422.1	2229	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCACAACAGTCCCCAGA	-25	True	NA	NA	False	NA	NA	NA	27793940	27790314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27791902_27792999_27793233_27793531
transcript_48014.known	chr19	-	4506	5	FSM	ENSG00000261824.8	ENST00000665874.1	4506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	27.617928959283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAATGCTTTATGATG	-23	True	NA	NA	False	AAGAAA	-19	NA	27793938	27727881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27771663_27771990_27792999
transcript_48016.known	chr19	-	1110	5	FSM	ENSG00000261824.8	ENST00000667396.1	1110	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	31.4722099637124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATGTGAAAATGCTTT	-2	True	NA	NA	False	AATAAA	-44	NA	27793694	27715576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27715859_27732795_27732968_27746080_27746341_27792999_27793233_27793531
transcript_48017.known	chr19	-	1999	3	FSM	ENSG00000261824.8	ENST00000590523.2	1999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATCTTTCTTTTTTTTT	24	True	NA	NA	False	AATAAA	-20	NA	27793891	27790492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_27791902_27792999_27793230_27793531
transcript_48019.nic	chr19	+	2238	4	NIC	ENSG00000267575.8	novel	1631	4	NA	NA	-10	205	intron_retention	FALSE	canonical	3	9	junction_3	6.18241233033047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAACTCCTAGAGACA	8369	False	NA	NA	False	AATACA	-28	NA	27793420	27807326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_27793651_27797753_27798177_27805604_27806186_27806322
transcript_4802.known	chr1	+	3080	4	FSM	ENSG00000142871.18	ENST00000674818.1	3080	4	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	49.8820831784542	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGTAGTCTGTTTC	154	False	NA	NA	False	NA	NA	NA	85580914	85584589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_85581579_85581927_85582285_85582415_85582625_85582739
transcript_48022.known	chr19	+	1824	3	FSM	ENSG00000267575.8	ENST00000585917.6	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGCTTGTAATTT	8379	False	NA	NA	False	AATAAA	-24	NA	27793430	27806785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27793651_27797753_27798177_27805604
transcript_48026.known	chr19	+	1755	3	FSM	ENSG00000267575.8	ENST00000668414.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAGTATAACTATAAA	-25	True	NA	NA	False	AATAGA	-11	NA	27793451	27800391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27793610_27797753_27798177_27799217
transcript_48027.known	chr19	+	1451	3	FSM	ENSG00000267575.8	ENST00000663452.2	1486	3	35	0	13	0	multi-exon	FALSE	canonical	1	1	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAATGAAAATATTTGGC	21	True	NA	NA	False	AATAAA	-16	NA	27794051	27807121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27794123_27805604_27806186_27806322
transcript_48028.known	chr19	+	1696	3	FSM	ENSG00000267575.8	ENST00000587188.2	1696	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAGTATAACTATAAA	-7	True	NA	NA	False	AATAGA	-11	NA	27794023	27800391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27794123_27797753_27798177_27799217
transcript_48029.known	chr19	+	1829	3	FSM	ENSG00000267575.8	ENST00000669503.1	1829	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	377	False	NA	NA	False	AATAAA	-21	NA	27793894	27806782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27794123_27797753_27798177_27805604
transcript_4803.nnic	chr1	-	2918	11	NNC	ENSG00000117174.11	novel	6080	11	NA	NA	-30	-3385	intron_retention	FALSE	canonical	1	4	junction_4	40.6163760077139	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATGTGTGTACTTAA	NA	False	NA	-3	True	AGTAAA	-17	NA	85708463	85652807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85679372_85679449_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
transcript_48030.nic	chr19	+	779	2	ISM	ENSG00000267575.8	ENST00000592404.6	1796	3	-31	2089	-10	-13	5prime_fragment	FALSE	canonical	3	23	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAGAACAAAACAGCAGA	8369	False	NA	NA	False	NA	NA	NA	27793420	27798302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_27793651_27797753
transcript_48032.known	chr19	+	2401	1	FSM	ENSG00000267575.8	ENST00000588784.1	2401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTTAAAACTAAC	-7	True	NA	NA	False	NA	NA	NA	27794023	27796424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27794000_27796400
transcript_48033.known	chr19	+	656	2	FSM	ENSG00000267575.8	ENST00000586784.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	27793482	27798282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27793610_27797753
transcript_48034.known	chr19	+	1335	2	FSM	ENSG00000267575.8	ENST00000590628.1	1335	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	17	True	NA	NA	False	AATAAA	-21	NA	27793493	27806782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_27793651_27805604
transcript_48039.nnic	chr19	-	1101	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-18	-1946	at_least_one_novel_splicesite	FALSE	non_canonical	2	29	junction_2	1631.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	-25	True	NA	-14	True	ATTAAA	-25	NA	29213169	29207265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_4804.known	chr1	-	6203	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_2	9.82187028027092	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTAACCCCTGACTT	-17	True	NA	NA	False	AATAAA	-20	NA	85708433	85649416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
transcript_48041.nnic	chr19	-	979	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-18	-2068	at_least_one_novel_splicesite	FALSE	non_canonical	2	29	junction_2	1631.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	-25	True	NA	-69	True	AATAAA	-18	NA	29213169	29207387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_48042.known	chr19	+	846	7	FSM	ENSG00000105171.10	ENST00000591824.5	846	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	88.2685296882945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTAAGCCAATTCCATT	13	True	NA	NA	False	NA	NA	NA	29606302	29615458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_29606326_29608656_29608710_29610319_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_48043.known	chr19	+	579	7	FSM	ENSG00000105171.10	ENST00000586420.5	579	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	89.0636476534244	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTGGAAACCGATGG	-7	True	NA	NA	False	NA	NA	NA	29606282	29615266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_29606326_29608656_29608710_29610408_29610633_29611867_29611940_29612116_29612179_29613870_29613973_29615243
transcript_48049.known	chr19	+	2321	6	FSM	ENSG00000105171.10	ENST00000221770.7	2321	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	84.5444261912044	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	4	True	NA	21	True	AATACA	-19	NA	29606293	29617237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_29606326_29608656_29608710_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_48051.known	chr19	-	4265	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	0	-539	0	-100	multi-exon	FALSE	canonical	3	4	junction_2	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	455	False	NA	-5	True	NA	NA	NA	29715060	29699036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29708253_29708424_29714906
transcript_48052.known	chr19	-	4348	3	FSM	ENSG00000131943.20	ENST00000323670.14	4348	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTGGGATTCATT	-5	True	NA	95	True	NA	NA	NA	29715261	29698936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29708253_29708424_29715124
transcript_48055.known	chr19	-	1188	2	FSM	ENSG00000131943.20	ENST00000392275.1	1188	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTCTCATCTTGGGAG	58	False	NA	NA	False	NA	NA	NA	29715457	29702340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29714906
transcript_48056.known	chr19	-	1912	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTCCCACATATTAT	294	False	NA	-15	True	AATAAA	-15	NA	29715221	29701162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_29702978_29715124
transcript_48061.known	chr19	+	7716	7	FSM	ENSG00000168813.17	ENST00000355898.6	7716	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	8.80814017448254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	-10	True	NA	NA	False	AATAAA	-13	NA	32345609	32387667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_48063.known	chr19	+	7638	6	FSM	ENSG00000168813.17	ENST00000311921.8	7638	6	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	30.6920185064456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	-26	True	NA	NA	False	AATAAA	-13	NA	32345593	32387667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32345784_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_48065.known	chr19	+	5968	9	FSM	ENSG00000178904.19	ENST00000592142.5	5968	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	24.5684630166398	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGATGAGTGTCTTGC	NA	False	NA	NA	False	AGTAAA	-14	NA	32458097	32485887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32458174_32458350_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32467473_32468814_32477521_32477655_32480398_32480558_32482078
transcript_48066.nnic	chr19	-	1073	4	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_3	6.59966329107444	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	NA	False	NA	0	True	AATAAA	-24	NA	32405590	32390049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_32390334_32391115_32391187_32399750_32399869_32404990
transcript_48069.known	chr19	+	558	6	FSM	ENSG00000105185.12	ENST00000221784.8	558	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	798.140188187514	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	-14	True	NA	16	True	AATAAA	-20	NA	32581201	32587425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32584954_32585012_32585815_32585908_32586857_32586930_32587252
transcript_48071.known	chr19	+	468	5	FSM	ENSG00000105185.12	ENST00000592786.5	468	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	853.497913002721	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGGCCAGATCTGT	16	True	NA	43	True	AATAAA	-29	NA	32581231	32587452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32586857_32586930_32587252
transcript_48074.known	chr19	+	1799	4	FSM	ENSG00000105185.12	ENST00000419343.7	1799	4	0	0	0	0	multi-exon	FALSE	canonical	3	1845	junction_1	97.5602378020882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCTTTTAAAAAAATAAAC	-15	True	NA	-22	True	NA	NA	NA	32581200	32587387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815
transcript_48079.known	chr19	+	154	3	FSM	ENSG00000105185.12	ENST00000379316.3	154	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTACAAGTGCTCACAG	41	False	NA	-54	True	AAGAAA	-32	NA	32581256	32587297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32581328_32582194_32582233_32587252
transcript_48080.known	chr19	+	480	4	FSM	ENSG00000105185.12	ENST00000586316.5	480	4	0	0	0	0	multi-exon	FALSE	canonical	3	2015	junction_2	26.2339898266013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	3388	False	NA	16	True	AATAAA	-20	NA	32584868	32587425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32585012_32585815_32585908_32586857_32586930_32587252
transcript_48081.known	chr19	-	4432	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_13	22.0923386849701	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATGGTATTTTTTT	-7	True	NA	-12	True	AGTAAA	-16	NA	32675180	32597005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_48090.known	chr19	-	5673	19	FSM	ENSG00000121289.18	ENST00000305768.10	5673	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.1369334592098	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTCCTGAGTGTTT	-8	True	NA	-13	True	ATTAAA	-17	NA	32971958	32875924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_48093.nic	chr19	-	1675	14	ISM	ENSG00000121289.18	ENST00000305768.10	5673	19	-26	39412	7	15870	5prime_fragment	FALSE	canonical	0	0	junction_2	21.7133013524269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTAATGTTTTTT	-34	True	NA	0	True	ATTAAA	-4	NA	32971984	32915336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_48095.nic	chr19	-	878	7	ISM	ENSG00000121289.18	ENST00000590597.6	1340	9	-21	6323	7	0	5prime_fragment	FALSE	canonical	3	75	junction_5	4.6785562825394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGTTGAACTTTCACC	-34	True	NA	0	True	AATAAA	-24	NA	32971984	32937529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_48096.known	chr19	-	2903	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-41	False	NA	-1	True	AATAAA	-19	NA	32971991	32968908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32971656_32971835
transcript_48097.known	chr19	+	2313	5	FSM	ENSG00000131944.10	ENST00000588258.6	2313	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	6.10327780786685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATTAGCCAGGCA	-18	True	NA	NA	False	NA	NA	NA	32972241	32978229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32972347_32973183_32973303_32973425_32973563_32974059_32974213_32976430
transcript_4810.nic	chr1	-	2953	17	NIC	ENSG00000122417.15	novel	7560	18	NA	NA	-10	626	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	16.3396565141376	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTTGTACTCTCTTTT	NA	False	NA	-4	True	TATAAA	-21	NA	86396352	86348110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_48100.known	chr19	+	875	5	FSM	ENSG00000131944.10	ENST00000254262.9	875	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.5887763261791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGGATCATCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	32972208	32976816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32972347_32973183_32973303_32973483_32973563_32974059_32974213_32976430
transcript_48103.known	chr19	+	784	3	FSM	ENSG00000131944.10	ENST00000590179.1	784	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGCAGTGAGCTGAGAT	0	True	NA	NA	False	NA	NA	NA	32972259	32976974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_32972347_32974059_32974213_32976430
transcript_48105.known	chr19	-	3501	15	FSM	ENSG00000131941.8	ENST00000254260.8	3501	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	11.1586426648786	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTCTTTTTACTT	-4	True	NA	-6	True	AATAAA	-18	NA	33064888	32978591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_32980257_32990513_32990670_32991822_32991970_32993976_32994054_32996025_32996221_32999585_32999706_33002246_33002404_33002812_33003001_33008013_33008181_33011678_33011804_33012646_33012725_33021570_33021647_33026503_33026633_33044248_33044365_33064783
transcript_48108.known	chr19	+	3191	20	FSM	ENSG00000076650.7	ENST00000170564.7	3191	20	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_13	9.73271605323268	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCGTTTTTTGGGA	-5	True	NA	NA	False	NA	NA	NA	33081180	33130542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587_33126734_33130129
transcript_48110.known	chr19	-	1804	16	FSM	ENSG00000124299.15	ENST00000651901.1	1804	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	260.314032575187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATGATTGAAAATAAT	27	False	NA	-25	True	ATTAAA	-9	NA	33521756	33387107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387654_33387745_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_48112.known	chr19	-	1929	16	FSM	ENSG00000124299.15	ENST00000588328.6	1929	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	268.09699737222	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTGCGTGGCTTCCC	34	False	NA	-3	True	AATAAA	-17	NA	33521749	33386951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33396089_33396156_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_48117.known	chr19	-	1907	15	FSM	ENSG00000124299.15	ENST00000244137.12	1907	15	0	0	0	0	multi-exon	TRUE	canonical	3	668	junction_14	58.0550407380965	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCGTGGCTTCCCCT	-8	True	NA	-1	True	AATAAA	-19	NA	33521791	33386949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_48121.known	chr19	-	1638	13	FSM	ENSG00000124299.15	ENST00000436370.7	1638	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	213.954174740501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTCTGATACTTTCTG	-5	True	NA	59	True	ACTAAA	-42	NA	33521788	33387023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33512592_33512777_33521743
transcript_48122.known	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_6	217.603040726304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-8	True	NA	-31	True	NA	NA	NA	33521791	33386979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_48125.known	chr19	-	1020	9	FSM	ENSG00000124299.15	ENST00000651646.1	1020	9	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_8	52.5700425622807	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCATTATGTCTGCTG	25	False	NA	NA	False	AGTAAA	-26	NA	33521758	33462643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_48126.known	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_10	333.46813940765	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	42	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
transcript_48128.known	chr19	+	3431	10	FSM	ENSG00000257103.9	ENST00000544216.8	3431	10	0	0	0	0	multi-exon	TRUE	canonical	3	725	junction_9	165.531541882581	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	-22	True	NA	23	True	AATAAA	-17	NA	34172503	34229288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
transcript_48139.known	chr19	+	6680	14	FSM	ENSG00000166398.14	ENST00000299505.8	6680	14	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	9.1806330755912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCCTTGTTTAAAA	-14	True	NA	NA	False	ATTAAA	-19	NA	34254553	34355566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34254615_34299678_34300969_34319906_34320117_34327420_34327562_34327770_34327867_34327989_34328152_34330188_34330348_34333703_34333802_34339866_34339993_34341421_34342456_34347876_34348043_34349015_34349154_34351513_34351593_34352646
transcript_4814.nic	chr1	-	2327	17	NIC	ENSG00000122417.15	novel	7560	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	16.3396565141376	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	NA	False	NA	-10	True	AATAAA	-13	NA	86396352	86348736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_48140.nic	chr19	+	232	2	ISM	ENSG00000166398.14	ENST00000589583.5	582	3	-25	716	2	-233	5prime_fragment	FALSE	canonical	3	89	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTTGTTTTCAGGAA	-12	True	NA	NA	False	TTTAAA	-8	NA	34254555	34299851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_34254615_34299678
transcript_48141.known	chr19	+	4341	19	FSM	ENSG00000105220.17	ENST00000415930.8	4341	19	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	291.290021358799	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	5015	False	NA	31	True	AATAAA	-20	NA	34364739	34402413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34365020_34365259_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_48146.known	chr19	+	4125	18	FSM	ENSG00000105220.17	ENST00000356487.11	4125	18	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_8	116.322068110104	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	5	True	NA	31	True	AATAAA	-20	NA	34365195	34402413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_48159.known	chr19	+	1157	7	FSM	ENSG00000126249.8	ENST00000246535.4	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	13.5113121330075	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATGTACCTTAT	-10	True	NA	15	True	ATTAAA	-20	NA	34404398	34426168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34404539_34404648_34404816_34404929_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_48163.known	chr19	+	1227	6	FSM	ENSG00000126249.8	ENST00000587385.6	1227	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	14.1788574998129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTTACATCCAAATA	16	True	NA	-3	True	ATTAAA	-2	NA	34404424	34426150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34404539_34404648_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_48169.nic	chr19	+	2700	18	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	253.726114494489	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	29	True	NA	27	True	AATAAA	-20	NA	34428418	34469890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34428571_34430092_34430187_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_4817.known	chr1	-	2155	16	FSM	ENSG00000122417.15	ENST00000370566.7	2155	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	24.406738595906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCTAAGTAGTAGAT	NA	False	NA	-11	True	AATAAA	-12	NA	86396340	86348737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_48171.known	chr19	+	4005	17	FSM	ENSG00000126261.13	ENST00000246548.9	4005	17	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	94.4675870338605	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTTCCTTGTGTAAT	-9	True	NA	27	True	ACTAAA	-19	NA	34428380	34471251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_48175.nic	chr19	+	2381	16	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	217.967479735446	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	98	False	NA	27	True	AATAAA	-20	NA	34428487	34469890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_48181.nnic	chr19	-	747	3	FSM	ENSG00000268751.2	ENST00000689749.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	17	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGTGTGTTCTTCA	3	True	NA	-1	True	AATAAA	-19	NA	34577795	34576728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34577032_34577265_34577457_34577542
transcript_48182.nic	chr19	-	652	3	FSM	ENSG00000268751.2	ENST00000690771.1	659	3	2	5	0	0	multi-exon	FALSE	canonical	3	8	junction_1	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	3	True	NA	-5	True	AATAAA	-15	NA	34577795	34576732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34576941_34577265_34577457_34577542
transcript_48183.known	chr19	-	612	3	FSM	ENSG00000268751.2	ENST00000687185.1	712	3	96	4	-36	0	multi-exon	FALSE	canonical	3	19	junction_1	11.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	97	False	NA	-5	True	AATAAA	-15	NA	34577701	34576732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34576995_34577265_34577457_34577542
transcript_48185.known	chr19	+	2590	5	FSM	ENSG00000089335.22	ENST00000423823.6	2590	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.6386004807846	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	0	True	NA	24	True	AATAAA	-34	NA	34677688	34686391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_48186.known	chr19	+	2600	5	FSM	ENSG00000089335.22	ENST00000457781.6	2600	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	59.9103496901829	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGACTGTTTG	11	False	NA	30	True	AATAAA	-40	NA	34677661	34686397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_48187.known	chr19	+	2853	5	FSM	ENSG00000089335.22	ENST00000505242.6	2853	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	80.5946648358314	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	-11	True	NA	29	True	AATAAA	-39	NA	34677677	34686396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_48189.known	chr19	-	540	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGAGAGACAGGGAG	6	True	NA	1	True	ATTAAA	-23	NA	34733837	34733297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34733300_34733800
transcript_48190.known	chr19	+	498	5	FSM	ENSG00000197841.15	ENST00000593781.5	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.4233494836396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTAAGAAGAATTTGG	19	True	NA	NA	False	AATAGA	-31	NA	34734262	34740725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34734361_34734969_34735047_34739147_34739269_34739522_34739610_34740610
transcript_48191.nic	chr19	+	2726	5	NIC	ENSG00000197841.15	novel	2791	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	18.0138835346518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCACTGTGACTATTT	-1	True	NA	24	True	AATAAA	-40	NA	34734193	34742872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34734361_34734969_34735047_34739147_34739269_34739522_34739622_34740610
transcript_48193.nic	chr19	+	2723	5	NIC	ENSG00000197841.15	novel	567	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	15.116216457831	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCACTGTGACTATTT	-1	True	NA	24	True	AATAAA	-40	NA	34734193	34742872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_34734361_34734969_34735047_34739147_34739269_34739525_34739622_34740610
transcript_48197.known	chr19	+	5792	4	FSM	ENSG00000197841.15	ENST00000492450.3	5792	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	20.2703943940144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATGAAGATTAAATGC	-1	True	NA	NA	False	AATAAA	-15	NA	34734242	34745378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34735047_34739147_34739269_34739522_34739622_34740610
transcript_48198.known	chr19	+	2265	4	FSM	ENSG00000197841.15	ENST00000459757.6	2265	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	15.8394724940223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGGAAGACCTTTTAGC	331	False	NA	NA	False	NA	NA	NA	34734574	34742186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34735047_34739147_34739269_34739525_34739622_34740610
transcript_48199.known	chr19	-	948	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	12	True	NA	3	True	AATAAA	-30	NA	34773200	34766967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34767412_34769428_34769556_34772823
transcript_4820.nic	chr1	-	2194	16	NIC	ENSG00000122417.15	novel	2155	16	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	26.5266323196561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	NA	False	NA	-10	True	AATAAA	-13	NA	86396352	86348736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86386914_86387087_86396032
transcript_48201.known	chr19	-	872	4	FSM	ENSG00000271109.2	ENST00000603718.2	872	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGGGTCTCATATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	34860566	34849050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860448
transcript_48202.known	chr19	-	939	4	FSM	ENSG00000271109.2	ENST00000665881.1	939	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	10.8423039781937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860715	34849047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860533
transcript_48204.known	chr19	-	874	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	25	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860691	34849047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34860173_34860303_34860448
transcript_48206.known	chr19	-	847	3	FSM	ENSG00000271109.2	ENST00000653487.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	14.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	34860747	34849045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34860173_34860303_34860533
transcript_48207.known	chr19	-	1046	2	FSM	ENSG00000271109.2	ENST00000655389.1	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	34860715	34849045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34860173
transcript_48208.known	chr19	-	628	2	FSM	ENSG00000271109.2	ENST00000657568.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGGGTCTCATATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	34850796	34849049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34849550_34850668
transcript_48209.known	chr19	+	1657	2	FSM	ENSG00000269037.1	ENST00000595783.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCATATGTAAATATGT	40	False	NA	1	True	ATTAAA	-13	NA	34905314	34908188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34906225_34907441
transcript_4821.nic	chr1	-	2210	16	NIC	ENSG00000122417.15	novel	2155	16	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	23.0404475265178	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	NA	False	NA	-10	True	AATAAA	-13	NA	86396352	86348736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_48212.known	chr19	+	2583	6	FSM	ENSG00000168661.15	ENST00000601957.5	2583	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.70522184569608	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	23	False	NA	6	True	AATAAA	-20	NA	34926979	34945168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
transcript_48216.known	chr19	+	2579	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.0591997693654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	-14	True	NA	2	True	AATAAA	-16	NA	34926902	34945164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_48217.known	chr19	+	2580	5	FSM	ENSG00000168661.15	ENST00000601142.2	2580	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	7.82224392358101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	-14	True	NA	6	True	AATAAA	-20	NA	34926902	34945168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34943222
transcript_48218.known	chr19	+	2651	5	FSM	ENSG00000168661.15	ENST00000439785.5	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.4013220313574	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTGAACTTCAAATAAT	-14	True	NA	8	True	AATAAA	-22	NA	34926902	34945170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_34927283_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_48220.known	chr19	+	2534	18	FSM	ENSG00000089351.15	ENST00000600231.5	2534	18	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_7	269.598599485032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	18	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_48221.known	chr19	+	808	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_5	54.1649333055991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	9	False	NA	28	True	AGTAAA	-25	NA	35000455	35010639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_48223.known	chr19	-	565	3	FSM	ENSG00000269303.1	ENST00000600959.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCAGGTCCTTTTT	16	True	NA	NA	False	AATAGA	-17	NA	35000170	34998232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_34998602_34999396_34999498_35000075
transcript_48225.nic	chr19	+	1911	13	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_1	32.4623713791146	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	1315	False	NA	21	True	AATAAA	-16	NA	35041700	35066573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35041873_35042307_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_48226.known	chr19	+	1746	13	FSM	ENSG00000105707.15	ENST00000672452.2	1746	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	16.5445526449712	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-20	True	NA	21	True	AATAAA	-16	NA	35041720	35066573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35041873_35042452_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_48229.nnic	chr19	+	1736	13	NNC	ENSG00000105707.15	novel	1746	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	36.9123398517804	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-27	True	NA	21	True	AATAAA	-16	NA	35041713	35066573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_35041873_35042469_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_48231.nnic	chr19	+	2029	13	NNC	ENSG00000105707.15	novel	1746	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.4970236944797	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-21	True	NA	21	True	AATAAA	-16	NA	35041719	35066573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_35041873_35042170_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_48240.nnic	chr19	+	1683	12	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	32.2830969255962	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-27	True	NA	21	True	AATAAA	-16	NA	35041713	35066573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35041873_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_48250.known	chr19	+	708	6	FSM	ENSG00000221946.8	ENST00000270310.7	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	14.3666279968544	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGTGTGTTCTCAT	-17	True	NA	24	True	AATAAA	-24	NA	35143254	35154302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35143365_35148693_35148724_35151253_35151329_35151439_35151483_35151632_35151674_35153893
transcript_48251.nic	chr19	+	387	4	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	557	5	557	0	3prime_fragment	FALSE	canonical	3	159	junction_3	16.062378404209	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACTTTGTCGGTCTCGG	578	False	NA	21	True	AATAAA	-18	NA	35141421	35143050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35141573_35142471_35142522_35142719_35142772_35142916
transcript_48257.known	chr19	+	878	9	FSM	ENSG00000089327.15	ENST00000392219.7	878	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	60.5160102782726	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGATCTCTGATCATTT	-14	True	NA	17	True	AGTAAA	-17	NA	35154734	35169881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154810_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_48258.known	chr19	+	883	9	FSM	ENSG00000089327.15	ENST00000592290.5	883	9	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	235.875364334642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCTGCCCGCCCCTGA	-2	True	NA	-82	True	NA	NA	NA	35154746	35169782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154810_35155550_35155612_35157420_35157618_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_48259.known	chr19	+	898	9	FSM	ENSG00000089327.15	ENST00000541435.6	898	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	227.305273805955	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCACTGTGGTCTTT	4	True	NA	-5	True	GGGGCT	-34	NA	35154752	35169859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154870_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_48260.known	chr19	+	862	9	FSM	ENSG00000089327.15	ENST00000590686.5	862	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	245.252643971477	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTCTTTGCCCCA	4	True	NA	1	True	AGTAAA	-1	NA	35154752	35169865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154810_35155532_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_48261.known	chr19	+	892	9	FSM	ENSG00000089327.15	ENST00000423817.7	892	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	242.966432866765	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	0	True	NA	15	True	AGTAAA	-15	NA	35154941	35169879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35155033_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_48268.known	chr19	+	927	9	FSM	ENSG00000089327.15	ENST00000588699.5	927	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	244.9275084081	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	38	False	NA	15	True	AGTAAA	-15	NA	35154786	35169879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35154810_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166429_35169565
transcript_48272.nnic	chr19	+	993	4	NNC	ENSG00000105699.17	novel	1932	10	NA	NA	0	-1192	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	789.426937017536	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGTGACACATG	-4	True	NA	2	True	ATTAAA	-9	NA	35249001	35261396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_35249132_35250314_35250660_35258944_35259065_35260998
transcript_48274.known	chr19	+	2357	11	FSM	ENSG00000105695.15	ENST00000392213.8	2357	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.14709105535839	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTCTAGATCCTGATG	-4	True	NA	5	True	AATAAA	-16	NA	35292160	35313807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35292205_35294234_35294291_35295385_35295455_35295612_35295982_35299553_35299851_35300146_35300405_35302447_35302709_35309873_35310162_35310546_35310644_35311917_35312018_35313289
transcript_48290.known	chr19	-	842	16	FSM	ENSG00000161249.21	ENST00000443640.5	842	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	534.578646121306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGTGCCAGCCCTG	2	True	NA	NA	False	NA	NA	NA	35510439	35497470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_4830.known	chr1	-	4376	18	FSM	ENSG00000122417.15	ENST00000317336.11	4376	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	34.0347878208007	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTAAACCTGATA	NA	False	NA	-17	True	AATAAA	-23	NA	86396342	86350094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86352209_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86368635_86368723_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_4832.nic	chr1	-	1651	12	ISM	ENSG00000122417.15	ENST00000294678.6	4267	18	-72	8693	-10	0	5prime_fragment	FALSE	canonical	3	63	junction_6	10.7910278005265	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGGAATTTCAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	86396352	86358786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_48321.known	chr19	-	970	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	474.969236001585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	2	True	NA	-10	True	AATAAA	-21	NA	35510439	35497219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_4835.nic	chr1	-	1534	11	NIC	ENSG00000122417.15	novel	4376	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	20.9131537554717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGGAATTTCAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	86396352	86358786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_48387.known	chr19	-	935	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	430.608959949615	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	10	True	NA	-10	True	AATAAA	-21	NA	35510431	35497219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_48400.known	chr19	-	827	13	FSM	ENSG00000161249.21	ENST00000467637.5	827	13	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_9	462.943091054997	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	-5	True	NA	-127	True	NA	NA	NA	35510446	35497336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_48406.known	chr19	-	666	13	FSM	ENSG00000161249.21	ENST00000498211.5	666	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	510.089119392114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	6	True	NA	NA	False	NA	NA	NA	35510435	35498715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_4841.known	chr1	-	1650	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTTCGAGCTACTT	-22	True	NA	NA	False	AATAAA	-29	NA	86396323	86385727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86387087_86396032
transcript_48415.known	chr19	-	593	12	FSM	ENSG00000161249.21	ENST00000472252.6	593	12	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	439.575621790753	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTCCTCCCCTTGGCCC	16	True	NA	NA	False	NA	NA	NA	35510425	35497489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_48432.known	chr19	-	877	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	444.622915727566	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	6	True	NA	-13	True	AATAAA	-18	NA	35510435	35497222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_48434.known	chr19	-	820	12	FSM	ENSG00000161249.21	ENST00000480502.5	820	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	513.215579854079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACTGTGACAGTTCTC	-18	True	NA	-96	True	NA	NA	NA	35510459	35497305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_48447.known	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	337.844895704699	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-29	True	NA	-75	True	NA	NA	NA	35510470	35497284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_4845.known	chr1	-	961	1	FSM	ENSG00000261737.1	ENST00000565575.1	961	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTCTATTTTAGATC	1046	False	NA	NA	False	AATAAA	-16	NA	86704462	86703501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86703500_86704500
transcript_48452.known	chr19	-	606	12	FSM	ENSG00000161249.21	ENST00000483855.5	606	12	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_8	474.736481927319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	6	True	NA	NA	False	NA	NA	NA	35510435	35498715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_4847.known	chr1	+	6371	9	FSM	ENSG00000097033.14	ENST00000370558.8	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_5	29.2435890410189	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGCTAAATCTCGTA	-3	True	NA	22	True	AATAAA	-16	NA	86704575	86748184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_48474.known	chr19	-	848	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	347.703839495626	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	2	True	NA	-12	True	AATAAA	-19	NA	35510439	35497221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_48475.nic	chr19	-	954	11	NIC	ENSG00000161249.21	novel	970	14	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	625	junction_1	346.342619381444	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-5	True	NA	-10	True	AATAAA	-21	NA	35510551	35497219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_48486.known	chr19	-	642	11	FSM	ENSG00000161249.21	ENST00000463292.5	642	11	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_8	325.355574717877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTGTCAGAGTGAGCC	-3	True	NA	NA	False	NA	NA	NA	35510508	35498716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_48487.known	chr19	-	1293	11	FSM	ENSG00000161249.21	ENST00000424570.6	1293	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	652.905506179876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	203	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_48512.known	chr19	-	1257	10	FSM	ENSG00000161249.21	ENST00000418261.5	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	671.547466676779	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	203	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_48522.known	chr19	-	1111	9	FSM	ENSG00000161249.21	ENST00000451297.6	1111	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	691.295161273388	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGACAAGGAGCCACCA	209	False	NA	-119	True	NA	NA	NA	35513475	35503419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_48526.known	chr19	-	510	8	FSM	ENSG00000161249.21	ENST00000458071.5	510	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	647.60478625754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	6	True	NA	-14	True	AATAAA	-6	NA	35510435	35503314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_48529.known	chr19	-	582	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	671.590375640584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_4853.known	chr1	-	1835	6	NNC	ENSG00000183291.18	novel	1502	6	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	496.196090270772	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGTGTGGTTCAAA	NA	False	NA	-7	True	ATTAAA	-19	NA	86914424	86862446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_86863606_86868052_86868103_86880661_86880690_86880692_86880726_86903280_86903449_86914027
transcript_48535.known	chr19	-	364	7	FSM	ENSG00000161249.21	ENST00000450261.1	364	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	643.493179623702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCGTGACCTCCAGAC	-1	True	NA	NA	False	AAAACA	-42	NA	35510442	35503431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
transcript_4854.known	chr1	-	727	6	FSM	ENSG00000183291.18	ENST00000401030.4	727	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	577.190990920683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTTAACAAAACCCATTT	-2	True	NA	NA	False	ATTAAA	-43	NA	86914126	86863300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86887155_86887197_86903280_86903449_86914027
transcript_48543.known	chr19	-	600	6	FSM	ENSG00000161249.21	ENST00000408915.6	600	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	396.528637049079	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-1	True	NA	-10	True	AATAAA	-21	NA	35501911	35497219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35501822
transcript_48551.known	chr19	-	458	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_3	436.577599058861	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-29	True	NA	-5	True	AATAAA	-15	NA	35510470	35503305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_48552.nic	chr19	-	533	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	774	junction_3	433.024248743647	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510551	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_48559.known	chr19	-	577	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_3	454.367348628838	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-28	True	NA	-3	True	AATAAA	-17	NA	35510469	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
transcript_48561.known	chr19	-	414	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_4	466.4672416151	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	3209	False	35510505	-3	True	AATAAA	-17	NA	35510475	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_48562.known	chr19	-	441	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_4	461.701472815498	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_48568.known	chr19	-	370	5	FSM	ENSG00000161249.21	ENST00000470746.6	370	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	438.186818035413	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	5	True	NA	-3	True	AATAAA	-17	NA	35510436	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183_35510253_35510378
transcript_48571.known	chr19	-	351	4	FSM	ENSG00000161249.21	ENST00000595571.5	351	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	809.338962089158	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	26	True	NA	-3	True	AATAAA	-17	NA	35510231	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35506050_35510183
transcript_48574.known	chr19	-	306	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	445.222291545346	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	18	True	NA	-3	True	AATAAA	-17	NA	35510423	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
transcript_48577.known	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	520.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	1	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35510183
transcript_48578.known	chr19	-	567	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_3	481.121144365487	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
transcript_48579.known	chr19	-	606	2	FSM	ENSG00000161249.21	ENST00000472365.6	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	3977	False	NA	-10	True	AATAAA	-21	NA	35497933	35497219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35497539_35497646
transcript_48580.known	chr19	+	868	7	FSM	ENSG00000105677.12	ENST00000222284.10	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_5	86.4272333623301	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	7	True	NA	29	True	AGTAAA	-17	NA	35545625	35547526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_48583.known	chr19	+	1045	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	68.9583207452154	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	55	False	NA	29	True	AGTAAA	-17	NA	35545673	35547526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
transcript_48591.known	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	13	junction_3	38.2186690854963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-11	True	NA	-134	True	NA	NA	NA	35545503	35540859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
transcript_48592.nnic	chr19	-	1446	4	NIC	ENSG00000236144.9	novel	1627	4	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	39.5558676641869	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	NA	False	NA	-13	True	ATTAAA	-23	NA	35546025	35540738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35541585_35541750_35542075_35542910_35543098_35545936
transcript_48593.known	chr19	+	546	3	FSM	ENSG00000105677.12	ENST00000595180.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	26.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACCCCTGAGAAGGGAC	26	True	NA	NA	False	NA	NA	NA	35545644	35546829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545817_35545887_35545958_35546525
transcript_48595.known	chr19	-	3767	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-15	True	NA	-13	True	ATTAAA	-23	NA	35545507	35540738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35541585_35541750_35542075_35542910
transcript_48596.known	chr19	+	935	6	FSM	ENSG00000105677.12	ENST00000392204.6	935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_4	90.4645787034903	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	11	True	NA	29	True	AGTAAA	-17	NA	35545629	35547526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_48597.known	chr19	+	2762	18	FSM	ENSG00000249115.9	ENST00000585968.5	2762	18	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	30.8984271892303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTAGGTTGGGGGT	-12	True	NA	-44	True	NA	NA	NA	35612751	35623557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35620124_35620194_35620328_35622600_35622734_35622875
transcript_48598.known	chr19	+	553	2	FSM	ENSG00000249115.9	ENST00000588570.5	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCTGGGGACAATGGG	-12	True	NA	NA	False	NA	NA	NA	35612751	35614141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35612893_35613729
transcript_48599.known	chr19	+	1609	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	277.748734245541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGGCATGGAAGC	-20	True	NA	22	True	AATAAA	-18	NA	35629029	35637686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_48600.known	chr19	+	771	5	FSM	ENSG00000126254.12	ENST00000586618.5	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	336.634352822168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	18	True	NA	20	True	AATAAA	-16	NA	35629067	35637684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35629282_35629519_35629674_35631139_35631197_35637249_35637353_35637441
transcript_48601.known	chr19	+	536	2	FSM	ENSG00000105672.15	ENST00000591135.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGGCATGAATTACGAG	22	False	NA	NA	False	NA	NA	NA	35643665	35644682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35643754_35644234
transcript_48602.known	chr19	+	488	4	FSM	ENSG00000126267.11	ENST00000649813.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	4670	junction_1	503.799783864803	3644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	-2	True	NA	23	True	AATAAA	-19	NA	35648322	35658782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35648404_35651232_35651350_35654570_35654672_35658593
transcript_48605.known	chr19	+	290	2	FSM	ENSG00000126267.11	ENST00000590618.1	290	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTATGCGTGTGAAC	2920	False	NA	19	True	AATAAA	-15	NA	35651244	35658778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35651350_35658593
transcript_48606.nic	chr19	+	988	5	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6369	0	6369	0	3prime_fragment	FALSE	canonical	1	1	junction_1	4.92442890089805	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAATGAATGAATGAA	6384	False	NA	NA	False	AATAAA	-4	NA	35673181	35678465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35673307_35673437_35673546_35675839_35676020_35677811_35677896_35677974
transcript_48607.nic	chr19	+	1072	5	ISM	ENSG00000105668.7	ENST00000379013.6	1016	8	6514	-305	6514	0	3prime_fragment	TRUE	canonical	0	0	junction_3	6.02079728939615	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAATGAATGAATGAA	100	False	NA	NA	False	AATAAA	-4	NA	35673326	35678465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35673546_35675839_35676020_35676235_35676334_35677811_35677896_35677974
transcript_48609.nic	chr19	+	974	4	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6514	0	6514	0	3prime_fragment	FALSE	canonical	3	12	junction_1	0.471404520791032	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAATGAATGAATGAA	100	False	NA	NA	False	AATAAA	-4	NA	35673326	35678465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35673546_35675839_35676020_35677811_35677896_35677974
transcript_48611.nnic	chr19	+	781	3	NIC	ENSG00000105668.7	novel	1223	7	NA	NA	6527	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAATGAATGAATGAA	113	False	NA	NA	False	AATAAA	-4	NA	35673339	35678465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_35673546_35677811_35677896_35677974
transcript_48613.known	chr19	-	795	2	FSM	ENSG00000226510.2	ENST00000443196.2	808	2	13	0	13	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	10	False	NA	-13	True	AATAAA	-14	NA	35673291	35667947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35668686_35673234
transcript_48616.nic	chr19	-	915	9	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	16	junction_2	43.8263619297792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	-24	True	NA	-9	True	AATAAA	-22	NA	35745441	35742530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743154_35743206_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
transcript_48628.nic	chr19	-	716	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	41.4393800897434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	9920	False	NA	-9	True	AATAAA	-22	NA	35745389	35742530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744693_35745124_35745188_35745347
transcript_48629.nic	chr19	-	800	7	NIC	ENSG00000161265.15	novel	904	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	38.9304936178997	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	9861	False	NA	-9	True	AATAAA	-22	NA	35745448	35742530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744693_35745124_35745213_35745347
transcript_48631.nic	chr19	-	846	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	30.7503387515216	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	9861	False	NA	-9	True	AATAAA	-22	NA	35745448	35742530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745213_35745347
transcript_48636.known	chr19	-	765	6	FSM	ENSG00000161265.15	ENST00000378975.8	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	36.5918023606381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-1	True	NA	-5	True	AATAAA	-26	NA	35745418	35742526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35745124_35745213_35745347
transcript_48638.nic	chr19	-	701	6	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	38.6750565610446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	-24	True	NA	-9	True	AATAAA	-22	NA	35745441	35742530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745188_35745347
transcript_48639.known	chr19	-	729	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	35.1761282690406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	9864	False	NA	-10	True	AATAAA	-21	NA	35745445	35742531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
transcript_4864.known	chr1	-	1542	5	FSM	ENSG00000183291.18	ENST00000331835.10	1542	5	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	91.5027321996453	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTGGTTCAAAGT	-2	True	NA	-5	True	ATTAAA	-21	NA	86914126	86862444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914027
transcript_48646.known	chr19	-	329	3	FSM	ENSG00000126246.10	ENST00000591748.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	51	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTATGGCCCATGGC	30	True	NA	NA	False	NA	NA	NA	35740549	35739527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35739627_35739709_35739770_35740379
transcript_48647.nic	chr19	-	1439	3	ISM	ENSG00000126246.10	ENST00000246532.6	1647	5	1839	0	-17	0	3prime_fragment	FALSE	canonical	3	64	junction_2	31	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGATTTAGAAACCTTT	-34	True	NA	-12	True	AATAAA	-16	NA	35740613	35738800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_48649.nic	chr19	-	988	3	ISM	ENSG00000126246.10	ENST00000592537.5	1195	5	1834	-2	-17	2	3prime_fragment	FALSE	canonical	3	64	junction_2	31	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCAGTATACAATTAGC	-34	True	NA	-18	True	AATAAA	-18	NA	35740613	35739251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_4865.known	chr1	-	831	5	FSM	ENSG00000183291.18	ENST00000469566.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	530.51454975335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGATTTCTAAATTAGA	NA	False	NA	NA	False	NA	NA	NA	86914424	86863166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914314
transcript_48650.nnic	chr19	-	1006	2	NIC	ENSG00000126246.10	novel	1647	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGATTTAGAAACCTTT	20	True	NA	-12	True	AATAAA	-16	NA	35740559	35738800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35739627_35740379
transcript_48651.nnic	chr19	-	621	2	NIC	ENSG00000126246.10	novel	329	3	NA	NA	-27	4	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGTATACAATTAGCAC	4794	False	NA	-16	True	AATAAA	-20	NA	35740623	35739249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_35739627_35740379
transcript_48652.known	chr19	-	975	6	FSM	ENSG00000161265.15	ENST00000592913.5	975	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	36.2138095206787	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	-9	True	NA	-10	True	AATAAA	-21	NA	35745426	35742531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743808_35743905_35744069_35744422_35744625_35744739_35745124_35745188_35745347
transcript_48653.known	chr19	-	723	7	FSM	ENSG00000161265.15	ENST00000591084.5	723	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	49.2126903236237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-15	True	NA	-5	True	AATAAA	-26	NA	35744699	35742526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35742804_35743154_35743206_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35744625
transcript_48654.known	chr19	+	1037	11	FSM	ENSG00000188223.9	ENST00000591613.2	1037	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	449.043260722171	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	9	False	NA	8	True	AGTAAA	-18	NA	35745677	35754519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_48656.known	chr19	+	935	9	FSM	ENSG00000267796.8	ENST00000301159.14	935	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	8.06225774829855	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	9	True	NA	8	True	AGTAAA	-18	NA	35748575	35754519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35748759_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_4866.known	chr1	-	1785	5	NNC	ENSG00000183291.18	novel	1542	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	634.194912861969	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGTGTGGTTCAAA	NA	False	NA	-7	True	ATTAAA	-19	NA	86914424	86862446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_86863606_86880661_86880690_86880692_86880726_86903280_86903449_86914027
transcript_48664.known	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	145.568616886409	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	14	True	NA	24	True	AATAAA	-26	NA	35745650	35747519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
transcript_48666.known	chr19	+	603	4	FSM	ENSG00000205155.8	ENST00000222266.2	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	544.456303725714	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTGGGATCTT	-18	True	NA	24	True	AATAAA	-17	NA	35745618	35747004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35745701_35745872_35745992_35746418_35746524_35746707
transcript_48669.known	chr19	+	833	3	FSM	ENSG00000205155.8	ENST00000591949.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTCGATACTGACTT	4	True	NA	13	True	AATAAA	-6	NA	35745599	35746993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35745701_35745834_35745992_35746418
transcript_48672.known	chr19	+	772	5	FSM	ENSG00000167595.15	ENST00000537459.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	9.01041064547005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAACCA	14	True	NA	NA	False	ACTAAA	-15	NA	35758193	35762563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762252
transcript_48673.known	chr19	+	1266	5	FSM	ENSG00000167595.15	ENST00000536950.5	1266	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	12.9807549857472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGCTGATCCCCATT	-1	True	NA	NA	False	AAAAAG	-1	NA	35758178	35763045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762255
transcript_48676.known	chr19	-	1473	10	FSM	ENSG00000250799.11	ENST00000653904.2	1473	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.28620410031003	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCCTGCACTGACG	-1	True	NA	NA	False	AATAAA	-21	NA	35812845	35799987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35800223_35802190_35802277_35802967_35803079_35806429_35806597_35806674_35806831_35807040_35807122_35811961_35812049_35812133_35812273_35812359_35812557_35812631
transcript_48677.known	chr19	+	2980	15	FSM	ENSG00000126259.20	ENST00000360202.10	2980	15	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	7.2702917999997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	-6	True	NA	11	True	AATAAA	-19	NA	35856910	35867136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_48678.nic	chr19	-	1227	9	ISM	ENSG00000161270.20	ENST00000353632.6	3741	28	507	21547	507	0	internal_fragment	FALSE	canonical	1	2	junction_3	1.5612494995996	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAAGATTCTGAGGTTT	1176	False	NA	NA	False	ATTAAA	-13	NA	35851331	35847926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_35848166_35848252_35848398_35848636_35848795_35848975_35849148_35849235_35849364_35849549_35849654_35850363_35850446_35850960_35851090_35851261
transcript_48679.nic	chr19	+	1789	6	ISM	ENSG00000126259.20	ENST00000360202.10	2980	15	4423	0	4228	0	3prime_fragment	FALSE	canonical	3	36	junction_4	5.32916503778969	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	4326	False	NA	11	True	AATAAA	-19	NA	35861333	35867136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_48680.nic	chr19	+	1684	5	ISM	ENSG00000126259.20	ENST00000592409.5	2563	14	4747	-636	4228	0	3prime_fragment	FALSE	canonical	2	4	junction_2	17.4839211849059	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	4326	False	NA	11	True	AATAAA	-19	NA	35861333	35867136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_35861642_35861804_35862025_35862926_35863037_35864647_35864714_35866156
transcript_48683.known	chr19	+	445	4	FSM	ENSG00000126264.10	ENST00000437550.2	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTCGTATTCTTTCTC	9	False	NA	10	True	AATAAA	-14	NA	35902537	35904270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_35902637_35903350_35903417_35903771_35903904_35904122
transcript_48684.known	chr19	-	575	5	FSM	ENSG00000011600.12	ENST00000262629.9	575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGCCAGATCCTTGGG	-12	True	NA	NA	False	AATAAA	-16	NA	35908295	35904402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_35904635_35907217_35907265_35907445_35907581_35907729_35907763_35908167
transcript_48687.known	chr19	-	1377	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	44.490310800241	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36	True	NA	-32	True	AATAAA	-18	NA	36008813	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_48688.known	chr19	-	1175	8	FSM	ENSG00000181392.17	ENST00000490730.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	60.1175718819348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-16	True	NA	-35	True	AATAAA	-15	NA	36008793	36003309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_48690.nnic	chr19	-	1237	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_6	60.3759057903068	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	9061	False	NA	-32	True	AATAAA	-18	NA	36008824	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
transcript_48692.nnic	chr19	-	1243	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	63.3554785844655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	9062	False	NA	-32	True	AATAAA	-18	NA	36008823	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36008216_36008368_36008553
transcript_48694.nnic	chr19	-	1192	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	66.8025698108488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	9062	False	NA	-32	True	AATAAA	-18	NA	36008823	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36007124_36007269_36008216_36008368_36008553
transcript_48699.nnic	chr19	-	1042	6	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	82.1549755036175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	9061	False	NA	-32	True	AATAAA	-18	NA	36008824	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36007124_36007269_36008553
transcript_48700.known	chr19	-	1004	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	68.7092424641693	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-5	True	NA	-35	True	AATAAA	-15	NA	36008782	36003309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
transcript_48707.nnic	chr19	-	887	5	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	78.3976243262511	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36	True	NA	-32	True	AATAAA	-18	NA	36008813	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008553
transcript_48710.nic	chr19	-	799	5	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	77.1633818595323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	9062	False	NA	-32	True	AATAAA	-18	NA	36008823	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008216_36008368_36008553
transcript_48714.nic	chr19	-	623	4	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	82.4998316496599	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-21	True	NA	-32	True	AATAAA	-18	NA	36008798	36003306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008553
transcript_48715.known	chr19	-	382	3	FSM	ENSG00000181392.17	ENST00000397428.8	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	9266	False	NA	-35	True	AATAAA	-15	NA	36008619	36003309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36003521_36005332_36005438_36008553
transcript_48718.known	chr19	-	3350	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_13	12.5382255758826	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCGGGTCATTGG	-23	True	NA	-4	True	AATAAA	-16	NA	36032873	36014659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
transcript_48720.nnic	chr19	+	748	4	NNC	ENSG00000267698.2	novel	643	4	NA	NA	-30	4383	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.92160768674447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGCTCCCCCAAGCTGA	NA	False	NA	NA	False	GATAAA	-31	NA	36014462	36023911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36014587_36016811_36016961_36019233_36019385_36023587
transcript_48721.known	chr19	+	643	4	FSM	ENSG00000267698.2	ENST00000586962.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAGGGAGAAATAAGA	-12	True	NA	NA	False	NA	NA	NA	36014507	36045972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36014587_36016811_36016961_36019233_36019385_36045708
transcript_48722.known	chr19	-	1349	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	13.9124245031395	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-22	True	NA	-3	True	AATAAA	-21	NA	36054285	36034983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
transcript_48724.nic	chr19	-	1353	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	48.3758433747901	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	250	False	NA	-3	True	AATAAA	-21	NA	36054503	36034983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054348
transcript_48726.known	chr19	-	1084	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	64.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	376	False	NA	NA	False	NA	NA	NA	36054377	36035147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36035593_36039322_36039719_36054134
transcript_48729.known	chr19	+	1672	10	FSM	ENSG00000075702.19	ENST00000681542.1	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	91.7639214721702	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGAGTTTATCAATTA	-6	True	NA	7	True	AATAAA	-15	NA	36054896	36075418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36075054
transcript_4873.known	chr1	-	1220	4	FSM	ENSG00000183291.18	ENST00000370554.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	576.557600476021	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAATTTGGAATTC	-10	True	NA	-15	True	AATAAA	-13	NA	86914134	86862724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_86863606_86880661_86880726_86903280_86903449_86914027
transcript_48730.known	chr19	+	1067	7	FSM	ENSG00000105254.12	ENST00000651435.1	1067	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	808.144926496617	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	3	True	NA	19	True	ATTAAA	-20	NA	36115505	36125945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36124249_36124364_36125450_36125524_36125667
transcript_48731.known	chr19	+	724	6	FSM	ENSG00000105254.12	ENST00000589996.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	635.63983512678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACCTAAGGAATTCCC	16	True	NA	-74	True	NA	NA	NA	36115518	36125778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121670_36125450_36125524_36125667
transcript_48732.known	chr19	+	987	6	FSM	ENSG00000105254.12	ENST00000221855.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	1684	junction_2	60.8604962188118	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATTTAGAGGACTTC	-35	True	NA	15	True	ATTAAA	-16	NA	36115467	36125941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_48734.known	chr19	+	875	6	FSM	ENSG00000105254.12	ENST00000585746.1	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	695.369944705694	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	62	False	NA	19	True	ATTAAA	-20	NA	36115837	36125945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36115929_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_48737.known	chr19	-	493	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	945.311250329753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGAGTTTTCTGTGTTT	-16	True	NA	-10	True	AATAAA	-13	NA	36114906	36113715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
transcript_48738.known	chr19	-	443	6	FSM	ENSG00000105258.9	ENST00000221859.9	443	6	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	80.3183665172543	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	15	True	NA	-3	True	AATAAA	-20	NA	36114875	36113708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
transcript_48739.known	chr19	-	744	6	FSM	ENSG00000105258.9	ENST00000586439.1	744	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	957.861785436709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCATGCGTGAGTTTT	-12	True	NA	-18	True	AATAAA	-5	NA	36115213	36113723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114819
transcript_48743.known	chr19	-	368	5	FSM	ENSG00000105258.9	ENST00000585842.5	368	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	1035.83046392737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTTTTCTGTGTTTAT	30	True	NA	-8	True	AATAAA	-15	NA	36114860	36113713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114797
transcript_48744.known	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.2076229926569	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	8	True	NA	-17	True	AATAAA	-6	NA	36115193	36113722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
transcript_48746.known	chr19	-	542	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.6447851244009	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTGTGTTTATTTGC	-1	True	NA	-4	True	AATAAA	-19	NA	36114891	36113709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
transcript_4875.known	chr1	+	6759	7	FSM	ENSG00000153936.18	ENST00000370550.10	6759	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	22.1108319357027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATGACTGTACTTT	-70	True	NA	12	True	TATAAA	-3	NA	86914634	87109982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837_87097936_87103431_87103590_87104469
transcript_48752.nic	chr19	+	1364	10	NIC	ENSG00000126247.11	novel	690	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	274.904338019116	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	2	True	NA	27	True	AATAAA	-24	NA	36141312	36150353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36141565_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_48753.nic	chr19	+	1208	10	NIC	ENSG00000126247.11	novel	570	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	270.892261395468	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	-20	True	NA	27	True	AATAAA	-24	NA	36141587	36150353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36141684_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_48762.known	chr19	-	1799	5	FSM	ENSG00000196357.12	ENST00000304116.10	1799	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.6583123951777	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGCATCAGATAATCT	5	True	NA	0	True	AATAAA	-32	NA	36214665	36182275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214621
transcript_48765.nnic	chr19	+	3327	4	NIC	ENSG00000167635.12	novel	3347	4	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_1	467.979344273512	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	356	False	NA	16	True	ATTAAA	-20	NA	36215084	36238768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36215156_36218121_36218196_36228747_36228820_36235658
transcript_48766.known	chr19	+	3347	4	FSM	ENSG00000167635.12	ENST00000443387.3	3347	4	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	357.592256938293	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	-2	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36215197_36218121_36218196_36228747_36228820_36235658
transcript_48769.known	chr19	+	533	3	FSM	ENSG00000167635.12	ENST00000591063.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	526.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTCATATGTTGCATTT	367	False	NA	NA	False	NA	NA	NA	36215095	36236059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36215156_36228747_36228820_36235658
transcript_48771.known	chr19	+	565	3	FSM	ENSG00000167635.12	ENST00000586094.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATATGTTGCATTTC	-2	True	NA	NA	False	NA	NA	NA	36215105	36236060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36215197_36228747_36228820_36235658
transcript_4878.known	chr1	+	1585	5	FSM	ENSG00000153936.18	ENST00000370551.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	8.16624148553054	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGAGTTTTCAGTTTT	-57	True	NA	23	True	AATAAA	-33	NA	86914647	87098445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837
transcript_48787.nic	chr19	-	1099	7	FSM	ENSG00000232677.10	ENST00000691592.1	1103	7	-12	16	0	-10	multi-exon	FALSE	canonical	3	81	junction_5	339.709025818011	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-24	True	NA	-16	True	ATTAAA	-16	NA	36331753	36313076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_4879.known	chr1	+	556	3	FSM	ENSG00000267272.5	ENST00000476432.5	556	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCTTTGAGGGCAAGC	2085	False	NA	NA	False	NA	NA	NA	87131968	87134131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_87132253_87133613_87133719_87133964
transcript_48793.known	chr19	-	1581	7	FSM	ENSG00000232677.10	ENST00000658126.2	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	363.464081979071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	10	True	NA	-33	True	NA	NA	NA	36331662	36313093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_48796.known	chr19	-	1358	7	FSM	ENSG00000232677.10	ENST00000412740.7	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	372.803977386985	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTATCCGTTACCTCA	-5	True	NA	NA	False	TATAAA	-44	NA	36331734	36315004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36315529_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_4880.known	chr1	+	4993	5	FSM	ENSG00000143013.13	ENST00000370544.10	4993	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	17.4266319178434	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTGTTATAAGTTCT	-2	True	NA	10	True	AATAAA	-19	NA	87328879	87348923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_87329245_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_48804.known	chr19	-	1003	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	16	0	-10	multi-exon	FALSE	canonical	3	299	junction_1	279.61187385374	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-24	True	NA	-16	True	ATTAAA	-16	NA	36331753	36313076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_48805.known	chr19	-	2038	6	FSM	ENSG00000232677.10	ENST00000585356.6	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	330.792019250767	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACAATTGTGCCTTCT	22	True	NA	NA	False	AAGAAA	-20	NA	36331707	36312585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_48807.known	chr19	-	1571	6	FSM	ENSG00000232677.10	ENST00000659786.2	1571	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	366.237955433349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTTTATTGACTC	-5	True	NA	NA	False	GGGGCT	-2	NA	36331734	36315219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_4882.known	chr1	+	1260	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	75.0345753636282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATTTGGAAAAAA	206	False	NA	65	True	AAAAAG	-11	NA	87331667	87345408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_48821.known	chr19	-	3581	5	FSM	ENSG00000232677.10	ENST00000666182.3	3595	5	14	0	7	0	multi-exon	FALSE	canonical	3	412	junction_1	275.287463390544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATAGGGCTCTTGGCT	-15	True	NA	-6	True	ATTAAA	-26	NA	36331687	36313066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_48831.known	chr19	-	2540	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	467.813590605869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-5	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
transcript_48833.known	chr19	-	2111	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	455.738472762127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-5	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
transcript_48838.known	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	412	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-16	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36325765_36330252_36330493_36331446
transcript_4884.nnic	chr1	+	1206	4	NNC	ENSG00000143013.13	novel	4993	5	NA	NA	3373	170	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	84.4801094275386	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATGGTGTTTGGGTT	3024	False	NA	6	True	AATAAA	-17	NA	87335153	87345578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_87335316_87339535_87339633_87340046_87340203_87344787
transcript_48840.nnic	chr19	-	1528	3	NIC	ENSG00000232677.10	novel	1397	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_1	531.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-24	True	NA	-3	True	AATAAA	-23	NA	36331753	36324906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36325888_36330252_36330493_36331446
transcript_48841.known	chr19	-	2856	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	2	10	-1	6	multi-exon	FALSE	canonical	3	209	junction_1	441.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-25	True	NA	-14	True	AATAAA	-12	NA	36331754	36324917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36327226_36330252_36330493_36331446
transcript_48842.known	chr19	-	2797	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	503	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-27	True	NA	-20	True	AATAAA	-6	NA	36331756	36324923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36327171_36330252_36330493_36331446
transcript_48843.known	chr19	-	2047	2	FSM	ENSG00000232677.10	ENST00000661195.1	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTATGTTCAAATCTT	35	True	NA	NA	False	NA	NA	NA	36331694	36328693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36330493_36331446
transcript_48846.nnic	chr19	-	940	5	NNC	ENSG00000142065.14	novel	7491	5	NA	NA	-2	-2362	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15.1554445662277	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAATTATAGACTATGTA	-7	True	NA	NA	False	AATAAA	-17	NA	36379203	36336814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_36337397_36360434_36360537_36362111_36362239_36367883_36367972_36379162
transcript_48847.known	chr19	-	7491	5	FSM	ENSG00000142065.14	ENST00000270001.12	7491	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	10.917302780449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTTTTAATTT	-5	True	NA	0	True	AATAAA	-20	NA	36379201	36334452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36341591_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_48849.nic	chr19	-	657	4	ISM	ENSG00000142065.14	ENST00000270001.12	7491	5	-2	25680	-2	-21	5prime_fragment	FALSE	canonical	3	22	junction_3	11.8977121983832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAAAGAAATAAAGAAAA	-7	True	NA	NA	False	AATAAA	-28	NA	36379203	36360132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_36360534_36362111_36362239_36367883_36367972_36379162
transcript_48852.nnic	chr19	-	1843	5	NNC	ENSG00000181007.9	novel	1360	2	NA	NA	-45	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	35.5132017706092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTGTTTTGATAAA	5298	False	NA	-6	True	AATAAA	-16	NA	36418689	36383117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_36384456_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_48853.nic	chr19	-	1821	5	NIC	ENSG00000181007.9	novel	1360	2	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.7888665095472	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTATCTGTTTTGATA	5298	False	NA	-8	True	AATAAA	-14	NA	36418689	36383119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36384436_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_48854.nic	chr19	-	1730	5	NIC	ENSG00000181007.9	novel	1360	2	NA	NA	-45	-91	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.7888665095472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATATATGTGGTTGTCT	5298	False	NA	-6	True	AATAAA	-25	NA	36418689	36383210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_36384436_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_48855.known	chr19	-	5941	5	FSM	ENSG00000181007.9	ENST00000392161.4	5941	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	7.14142842854285	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGCTACATAATGAG	8	True	NA	NA	False	AAAAAG	-1	NA	36418644	36388629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36394111_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_48864.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000424129.7	5207	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	9.82344135219425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	367	False	NA	0	True	AATAAA	-19	NA	36489506	36445118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489473
transcript_48865.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	0	1	0	multi-exon	FALSE	canonical	2	11	junction_4	9.49670995661129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	355	False	NA	0	True	AATAAA	-19	NA	36489518	36445118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
transcript_4887.known	chr1	-	3363	5	FSM	ENSG00000237505.8	ENST00000657030.1	3363	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAAAATCTTCGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	88684916	88537753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88540660_88556903_88557049_88569986_88570196_88570809_88570860_88684863
transcript_48872.known	chr19	-	5285	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGTTGTTTTTATTT	-16	True	NA	-1	True	AATAAA	-22	NA	36528271	36510686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36515700_36525154_36525374_36528218
transcript_48874.known	chr19	-	330	2	FSM	ENSG00000254004.7	ENST00000520608.2	330	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGGGTTTTTTTGTTTG	-10	True	NA	NA	False	GATAAA	-45	NA	36528265	36525090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36525374_36528218
transcript_48877.nnic	chr19	+	469	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	61	-1472	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	10.5303793326209	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	5	True	NA	15	True	AATAAA	-17	NA	36573437	36580340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36573556_36574820_36574901_36577140_36577238_36580166
transcript_48878.known	chr19	+	452	4	FSM	ENSG00000233527.10	ENST00000592880.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	5.8878405775519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	104	False	NA	6	True	ATTAAA	-20	NA	36573536	36594708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36573556_36574820_36574901_36593845_36593932_36594441
transcript_48879.nnic	chr19	+	447	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	53	-1472	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	8.05536398239638	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	-3	True	NA	15	True	AATAAA	-17	NA	36573429	36580340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36573526_36574820_36574901_36577140_36577238_36580166
transcript_4888.known	chr1	+	6070	22	FSM	ENSG00000065243.20	ENST00000370521.8	6070	22	0	0	0	0	multi-exon	FALSE	canonical	2	103	junction_12	19.0313025353095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAGTAATCTTACTTA	1	True	NA	NA	False	AATAAA	-15	NA	88684272	88836255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
transcript_48882.known	chr19	-	3955	6	FSM	ENSG00000197808.13	ENST00000588268.6	3955	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.88557558782486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTTCTCATTCCTT	-3	True	NA	0	True	NA	NA	NA	36666837	36636617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_48883.known	chr19	-	3326	6	FSM	ENSG00000197808.13	ENST00000396893.6	3326	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.78567765543682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTCAAAACACAACCAATA	15	True	NA	NA	False	AAAAAG	-18	NA	36666819	36637191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658335_36658426_36664697_36664787_36666689
transcript_48889.known	chr19	-	2361	5	FSM	ENSG00000197808.13	ENST00000360357.8	2361	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.51920240520265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAATATTTCTAGAAT	-7	True	NA	NA	False	NA	NA	NA	36666841	36638146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36640044_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_4889.nic	chr1	+	2103	3	ISM	ENSG00000065243.20	ENST00000316005.11	2632	11	12	44640	12	-43266	5prime_fragment	FALSE	canonical	3	158	junction_1	9	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGACATTAGGGAAGT	-38	True	NA	NA	False	AATATA	-35	NA	88684233	88761628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_88684629_88740987_88741289_88760221
transcript_48893.known	chr19	-	3668	3	FSM	ENSG00000225975.8	ENST00000665321.2	3702	3	34	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	-20	True	NA	NA	False	NA	NA	NA	36687434	36682635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36686016_36686685_36686807_36687267
transcript_48897.known	chr19	+	2802	6	FSM	ENSG00000189042.14	ENST00000682579.1	2802	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	29.8087235553621	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGTGTGTGTTTGCGT	12	True	NA	17	True	AATAAA	-27	NA	36687611	36721336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36687635_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_4890.known	chr1	+	2632	11	FSM	ENSG00000065243.20	ENST00000316005.11	2632	11	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_5	13.6165340670818	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCTCCTATCTCAG	NA	False	NA	NA	False	NA	NA	NA	88684221	88806268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496
transcript_48902.known	chr19	+	2825	6	FSM	ENSG00000189042.14	ENST00000536254.6	2825	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	34.3196736581221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTATATCATGTGTG	28	False	NA	8	True	AATAAA	-18	NA	36687627	36721327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36687687_36689400_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_48906.nnic	chr19	+	3021	6	NNC	ENSG00000189042.14	novel	2802	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.8474545818807	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	27	False	NA	7	True	AATAAA	-17	NA	36687626	36721326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_36687879_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_48908.nic	chr19	+	2751	5	NIC	ENSG00000189042.14	novel	2802	6	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	31.4722099637124	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	NA	False	NA	7	True	AATAAA	-17	NA	36687577	36721326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36687635_36689396_36689498_36712385_36712513_36712780_36712868_36718947
transcript_48916.known	chr19	-	7712	5	FSM	ENSG00000267041.6	ENST00000591344.2	7712	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	5.67340285895511	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCCTTATTTCTTAAT	-5	True	NA	-17	True	AATAAA	-21	NA	36772807	36743479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36750805_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_48917.known	chr19	+	2691	4	FSM	ENSG00000189042.14	ENST00000360729.8	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	21.4527905462721	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	15	False	NA	7	True	AATAAA	-17	NA	36689399	36721326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36689498_36712385_36712513_36712780_36712868_36718947
transcript_48918.known	chr19	+	1850	2	FSM	ENSG00000267260.3	ENST00000590750.1	1850	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCGGGCATTTCCTGTG	3	True	NA	NA	False	AATAAA	-24	NA	36773152	36777078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36773310_36775385
transcript_48920.known	chr19	-	922	5	FSM	ENSG00000197863.9	ENST00000528994.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	5.67340285895511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGGTTCAGATCATAC	471	False	NA	-91	True	AATACA	-43	NA	36850313	36819806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850001
transcript_48921.known	chr19	-	581	5	FSM	ENSG00000197863.9	ENST00000586323.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	9.98436277385793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATACGCACCTGTGAAAA	-3	True	NA	NA	False	NA	NA	NA	36850787	36819923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850699
transcript_48922.known	chr19	-	3040	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	8.25757228245687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATATTAATTTCAC	-15	True	NA	NA	False	AGTAAA	-15	NA	36838387	36817427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
transcript_48928.known	chr19	+	3024	4	FSM	ENSG00000267254.7	ENST00000657461.1	3024	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTATCTCTATCTATT	NA	False	NA	NA	False	CATAAA	-20	NA	36797501	36830267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36827649
transcript_48929.known	chr19	+	881	3	FSM	ENSG00000267254.7	ENST00000663523.1	881	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACGCCTGTAATCCCA	10	True	NA	88	True	AATAAA	-24	NA	36797533	36828194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36797812_36801875_36801934_36827649
transcript_4893.known	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	20.5993527406405	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-2	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
transcript_48930.nnic	chr19	+	3085	3	NIC	ENSG00000251247.12	novel	2959	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	-31	True	NA	12	True	ATTAAA	-24	NA	36850851	36879575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_36850969_36851727_36851905_36876784
transcript_48932.known	chr19	+	2959	3	FSM	ENSG00000251247.12	ENST00000420450.6	2959	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	-7	True	NA	12	True	ATTAAA	-24	NA	36850875	36879575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36850969_36851829_36851905_36876784
transcript_48934.known	chr19	+	4096	7	FSM	ENSG00000198453.14	ENST00000333987.12	4096	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.53382350291182	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGAATGTTTACTTGT	-13	True	NA	19	True	AATAAA	-27	NA	36916331	36952734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
transcript_48937.known	chr19	+	3639	5	FSM	ENSG00000197050.11	ENST00000337995.4	3639	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3.64005494464026	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGAAGTGGGA	-13	True	NA	63	True	AATAAA	-20	NA	37078432	37130368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127
transcript_4894.nic	chr1	-	1549	7	NIC	ENSG00000137947.12	novel	1599	7	NA	NA	4	292	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	50.0932463844512	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTTATATGTTACAT	591	False	NA	0	True	AATAAA	-19	NA	88891940	88852931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891606
transcript_48940.known	chr19	-	8572	5	FSM	ENSG00000196967.11	ENST00000292841.10	8572	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	26.2047228567676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGTGTTCTATTAT	4	True	NA	NA	False	AATAAA	-16	NA	37172695	37145539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37169838_37170055_37172626
transcript_48941.known	chr19	-	596	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTCTTTTTTTTT	5	True	NA	NA	False	AATAAA	-17	NA	37172694	37165384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37165697_37169838_37170055_37172626
transcript_48947.known	chr19	+	6732	6	FSM	ENSG00000188283.12	ENST00000684119.1	6732	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.00285656000464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCAGTATCACTGTT	0	True	NA	NA	False	AATAAA	-18	NA	37218213	37248740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37218275_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_48950.known	chr19	+	2241	5	FSM	ENSG00000188283.12	ENST00000586068.5	2241	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.79021822544144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATAAAAATTAAAGCC	1	True	NA	NA	False	NA	NA	NA	37217925	37243658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37218275_37224817_37224940_37230408_37230463_37235548_37236075_37242468
transcript_48963.known	chr19	+	2854	6	FSM	ENSG00000181666.19	ENST00000544914.5	2854	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	37.451835736049	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	10	True	NA	31	True	AATAAA	-21	NA	37317910	37364446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347776_37347873_37362108
transcript_48968.known	chr19	+	958	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	43.9914764471483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGAGTTCATGCCAC	-1	True	NA	NA	False	AAGAAA	-20	NA	37317899	37329105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
transcript_48971.known	chr19	+	2772	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	17	-4	-5	4	multi-exon	FALSE	canonical	3	30	junction_1	34.8164831653055	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTCAGTGTATCCTC	3	True	NA	36	True	AATAAA	-26	NA	37334665	37364451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
transcript_48972.known	chr19	+	573	4	FSM	ENSG00000181666.19	ENST00000592768.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	42.166337284616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAGCAGAATGGATTCA	NA	False	NA	NA	False	NA	NA	NA	37334623	37362299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37334783_37347189_37347317_37347776_37347873_37362108
transcript_48973.known	chr19	+	5186	5	FSM	ENSG00000189164.15	ENST00000436120.7	5186	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	7.11951543294907	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCCAGGCTTTGT	-3	True	NA	NA	False	TTTAAA	-19	NA	37371098	37393066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37388305
transcript_48976.known	chr19	-	4066	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	5.84465567848098	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGTGGTGACAAATC	-5	True	NA	-18	True	AATAAA	-15	NA	37467444	37411156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
transcript_48977.nic	chr19	-	3901	6	NIC	ENSG00000196437.12	novel	4066	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	24.7014169634052	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGTGGTGACAAATC	-15	True	NA	-18	True	AATAAA	-15	NA	37467454	37411156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467258
transcript_48979.known	chr19	+	5283	5	FSM	ENSG00000171827.11	ENST00000330173.6	5283	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.49106001094224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTCTATCAGTTCT	-12	True	NA	19	True	AATAAA	-15	NA	37469355	37488652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37469558_37470303_37470388_37475880_37476008_37476338_37476435_37483878
transcript_48981.nic	chr19	+	1868	4	NIC	ENSG00000171827.11	novel	1985	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAGCTTTCAAACAGG	-13	True	NA	-12	True	NA	NA	NA	37469354	37485320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_37469558_37475880_37476008_37476338_37476435_37483878
transcript_48982.known	chr19	-	579	4	FSM	ENSG00000196437.12	ENST00000592490.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	31.2089730686545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAGAAAGGAGCATT	8	True	NA	NA	False	NA	NA	NA	37467208	37414184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37414420_37444906_37444965_37465312_37465474_37467083
transcript_48989.nnic	chr19	+	1672	7	NNC	ENSG00000188227.14	novel	1915	8	NA	NA	-555	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	13.1275791116768	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTCTTACGTTTACAT	NA	False	NA	10	True	AATAAA	-18	NA	37506383	37536530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_37506548_37508264_37508404_37522531_37522648_37523409_37523455_37532355_37532483_37533307_37533404_37535545
transcript_48993.known	chr19	+	3191	5	FSM	ENSG00000171817.17	ENST00000316433.9	3191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACCTCATTGCTTAAG	-18	True	NA	NA	False	AATAAA	-16	NA	37594875	37614179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37595096_37598375_37598457_37599625_37599753_37601009_37601106_37611512
transcript_48996.known	chr19	-	2904	4	FSM	ENSG00000180479.14	ENST00000593133.5	2904	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATATTTGTTGTTAAAA	22	True	NA	NA	False	ATTAAA	-26	NA	37594746	37564252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594086
transcript_48997.nic	chr19	-	2761	4	ISM	ENSG00000180479.14	ENST00000358744.3	2049	5	18	-309	3	0	intron_retention	FALSE	canonical	2	4	junction_3	5.31245915016974	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATCTGATATTTGTT	25	True	NA	NA	False	ATTAAA	-19	NA	37594743	37564259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594219
transcript_48998.known	chr19	-	2289	4	FSM	ENSG00000180479.14	ENST00000451802.7	2289	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATCTGATATTTGTT	-24	True	NA	NA	False	ATTAAA	-19	NA	37594792	37564259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594740
transcript_49.known	ERCC-00143	+	767	1	FSM	ERCC-00143A	DQ668362	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00143_+_0_800
transcript_490.known	chr1	-	2061	4	FSM	ENSG00000116251.11	ENST00000234875.9	2061	4	0	0	0	0	multi-exon	FALSE	canonical	3	3836	junction_3	966.168492321891	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTTTGTTTTTTTTAA	10	True	NA	-2	True	ATTAAA	-30	NA	6199595	6185019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199561
transcript_49001.known	chr19	-	913	3	FSM	ENSG00000266916.8	ENST00000589025.6	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-40	NA	37507122	37497158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37497593_37505845_37506041_37506838
transcript_49003.known	chr19	-	1033	4	FSM	ENSG00000266916.8	ENST00000585890.3	1038	4	0	5	0	-5	multi-exon	TRUE	canonical	0	0	junction_2	5.24933858267454	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTTCAAGGTTCT	17	False	37507104	NA	False	AATAAA	-35	NA	37507087	37497163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37497593_37498023_37498184_37505845_37506041_37506838
transcript_49005.known	chr19	-	2443	6	FSM	ENSG00000189144.15	ENST00000586155.5	2443	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	8	True	NA	NA	False	NA	NA	NA	37779585	37738301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37740195_37770004_37770098_37770406_37770598_37771563_37771697_37773660_37773752_37779543
transcript_49006.nic	chr19	-	2310	6	NIC	ENSG00000189144.15	novel	2501	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.22710574513201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	-5	True	NA	NA	False	NA	NA	NA	37779598	37738301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_37740195_37770004_37770098_37771563_37771697_37772937_37772983_37773660_37773752_37779543
transcript_49009.known	chr19	-	2253	5	FSM	ENSG00000189144.15	ENST00000536220.7	2253	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.12132034355964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	7	True	NA	NA	False	NA	NA	NA	37779586	37738301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_37740195_37770004_37770098_37771563_37771697_37773660_37773752_37779543
transcript_49012.known	chr19	+	6580	5	FSM	ENSG00000267640.7	ENST00000443870.3	6580	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	2.87228132326901	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCTGTTCTGAGTAG	-3	True	NA	4	True	AATAAA	-19	NA	37817410	37832160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37823810_37823907_37826171
transcript_49016.known	chr19	-	2301	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_11	19.1220525195907	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	0	True	NA	-5	True	ATTAAA	-26	NA	38224222	38211005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_49017.known	chr19	-	2356	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	19.9192585078896	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGCCTCGTTCTCCCGT	5472	False	NA	-8	True	ATTAAA	-23	NA	38224250	38211008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_4902.known	chr1	-	1815	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	60.1428280288981	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTCATGTTTCCACC	-2	True	NA	-7	True	AATAAA	-17	NA	88992629	88935778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
transcript_49022.known	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	519.272507937788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	21	True	NA	-12	True	AATAAA	-17	NA	38315923	38305113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_49030.known	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_7	345.81568760818	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-19	True	NA	NA	False	NA	NA	NA	38315793	38305351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
transcript_49031.nic	chr19	-	1268	8	NIC	ENSG00000167645.17	novel	2769	8	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_7	373.676603604819	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGACAGCCTCTCCTTGG	6020	False	NA	-13	True	AATAAA	-16	NA	38315866	38305114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
transcript_49032.known	chr19	-	940	8	FSM	ENSG00000167645.17	ENST00000591784.5	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	380.644887805215	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	6087	False	NA	NA	False	NA	NA	NA	38315799	38305351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315746
transcript_49033.known	chr19	-	1181	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_7	252.349773455942	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	5972	False	NA	-2	True	AATAAA	-27	NA	38315914	38305103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_49038.known	chr19	-	1077	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	449.630142790853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAAT	5966	False	NA	NA	False	NA	NA	NA	38315920	38306696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_49041.known	chr19	+	1688	7	FSM	ENSG00000167642.13	ENST00000301244.12	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	3278	junction_5	131.776325643114	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGAACTTTCGCCAA	-3	True	NA	23	True	AATAAA	-16	NA	38264572	38292615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38264999_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_49046.known	chr19	+	1246	7	FSM	ENSG00000167642.13	ENST00000587090.5	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1321.8644240449	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCATGTGCTTTCTTT	0	True	NA	16	True	AATAAA	-26	NA	38264575	38292451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38264724_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_49063.known	chr19	+	1367	6	FSM	ENSG00000167642.13	ENST00000454580.7	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1332.06831656638	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	0	True	NA	33	True	AATAAA	-43	NA	38264575	38292468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38264999_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_49066.known	chr19	+	520	4	FSM	ENSG00000167644.12	ENST00000588605.5	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	28.8790581563873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	0	True	NA	24	True	ATTAAA	-18	NA	38304163	38305006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38304284_38304374_38304491_38304564_38304687_38304844
transcript_49067.known	chr19	+	374	4	FSM	ENSG00000167644.12	ENST00000301246.10	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	10.9645894689324	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	25	True	NA	24	True	ATTAAA	-18	NA	38304250	38305006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38304284_38304374_38304491_38304623_38304687_38304844
transcript_49068.known	chr19	-	560	4	FSM	ENSG00000167641.11	ENST00000301242.9	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	15.2534149181967	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	0	True	NA	-1	True	NA	NA	NA	38256374	38251236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38251447_38252305_38252339_38252893_38252975_38256138
transcript_4907.known	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_12	29.9085411435151	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-20	True	NA	-1	True	AATAAA	-23	NA	88992776	88935772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
transcript_49070.known	chr19	-	607	3	FSM	ENSG00000167641.11	ENST00000587515.5	607	3	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	6	True	NA	-1	True	NA	NA	NA	38253257	38251236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38251447_38252305_38252339_38252893
transcript_49071.known	chr19	+	462	3	FSM	ENSG00000167644.12	ENST00000589986.2	462	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCGACTGGTCAGCGTG	25	True	NA	21	True	ATTAAA	-15	NA	38304250	38305003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38304491_38304623_38304687_38304844
transcript_49073.known	chr19	+	1330	7	FSM	ENSG00000099341.12	ENST00000602911.5	1330	7	0	0	0	0	multi-exon	FALSE	canonical	3	1739	junction_6	104.13399487626	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGAAATGGAACCCATC	122	False	NA	28	True	AATAAA	-34	NA	38374758	38383824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116_38382229_38383252
transcript_49075.known	chr19	+	771	6	FSM	ENSG00000099341.12	ENST00000592561.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	1913	junction_3	61.0737259384099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGACCAAGGGGTGAAGT	-6	True	NA	NA	False	NA	NA	NA	38374771	38382254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116
transcript_49078.known	chr19	+	853	5	FSM	ENSG00000099341.12	ENST00000592001.5	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	1913	junction_3	64.5174395028197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCATGGAATTGGTTCA	10	True	NA	NA	False	NA	NA	NA	38374787	38381235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898
transcript_49079.nnic	chr19	+	797	4	NIC	ENSG00000188766.13	novel	478	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAAATGGATGAACAAAT	-11	True	NA	NA	False	AATAAA	-17	NA	38388703	38392647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_38388808_38390298_38390387_38391945_38392115_38392211
transcript_49082.nnic	chr19	+	1108	10	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-46	-20809	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	3.10714032313546	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGTGTGCA	NA	False	NA	11	True	AATAAA	-26	NA	38433644	38447077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_49084.nnic	chr19	-	593	7	NNC	ENSG00000104814.13	novel	2700	32	NA	NA	-385	0	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_2	42.621395253245	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-4	False	NA	-1	True	AATAAA	-19	NA	38596115	38587640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38589177_38589276_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596077
transcript_49086.nnic	chr19	-	495	6	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-385	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	34.8505380159331	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-4	False	NA	-1	True	AATAAA	-19	NA	38596115	38587640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596077
transcript_49088.nnic	chr19	-	442	5	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-395	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	38.6522961801754	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596125	38587640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596077
transcript_49090.nnic	chr19	-	340	4	NNC	ENSG00000104814.13	novel	443	5	NA	NA	-383	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	53.7959106252511	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-2	True	NA	-1	True	AATAAA	-19	NA	38596113	38587640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38596077
transcript_49091.nnic	chr19	-	526	4	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-395	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	43.9089968002003	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596125	38587640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38593281_38593338_38595484_38595730_38596077
transcript_49092.nnic	chr19	-	386	4	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-395	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	38.5256047612782	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596125	38587640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38587818_38595484_38595556_38595639_38595730_38596077
transcript_49093.known	chr19	+	516	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	NA	False	NA	8	True	AATACA	-17	NA	38596345	38601694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38596437_38597252_38597396_38601412
transcript_49096.nic	chr19	+	1385	2	NIC	ENSG00000267291.1	novel	516	3	NA	NA	-53	0	intron_retention	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	NA	False	NA	8	True	AATACA	-17	NA	38596292	38601694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_38597396_38601412
transcript_49100.known	chr19	+	772	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	0	0	0	0	multi-exon	FALSE	canonical	3	1657	junction_7	215.675493200658	2250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	-8	True	NA	25	True	AATAAA	-17	NA	38619187	38636954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_49101.known	chr19	+	760	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	732.079509454585	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	13	False	NA	24	True	AATAAA	-16	NA	38619094	38636953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_49107.known	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	751.043940126009	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	15	True	NA	24	True	AATAAA	-16	NA	38619210	38636953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
transcript_49109.known	chr19	+	780	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	756.63017533153	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	0	True	NA	26	True	AATAAA	-18	NA	38619081	38636955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_4911.nnic	chr1	-	1139	3	NNC	ENSG00000213516.10	novel	4756	3	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCGTAAATACTTTTC	156	False	NA	-11	True	ATTAAA	-16	NA	88992829	88979455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_88980250_88988251_88988352_88992584
transcript_49118.known	chr19	+	704	5	FSM	ENSG00000178982.10	ENST00000593062.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	941.908534572227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGATTTCTTTATTT	-10	True	NA	NA	False	NA	NA	NA	38619185	38630968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38630701
transcript_4912.known	chr1	-	991	3	FSM	ENSG00000213516.10	ENST00000413769.1	991	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	31.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTCCTAAGAGATCTG	-3	True	NA	NA	False	AGTAAA	-28	NA	88992759	88983350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88984067_88988251_88988352_88992584
transcript_49122.known	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	37.0619413954531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	0	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_49124.known	chr19	+	2923	21	FSM	ENSG00000130402.13	ENST00000424234.7	2923	21	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	33.035246328732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCCTCCGGGGTGGGT	11	True	NA	NA	False	NA	NA	NA	38647659	38729533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_49128.nic	chr19	-	1475	8	ISM	ENSG00000182472.9	ENST00000328867.9	3129	21	8764	0	-33	0	intron_retention	FALSE	canonical	2	7	junction_4	9.86645522847543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTTTTAATTCTTTC	8874	False	NA	-11	True	AATAAA	-33	NA	38735710	38730191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38734812_38734871_38735369
transcript_49129.nnic	chr19	-	1319	8	NIC	ENSG00000182472.9	novel	3129	21	NA	NA	-9	0	combination_of_known_splicesites	TRUE	canonical	2	4	junction_7	11.0675108275695	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTTTTAATTCTTTC	-19	True	NA	-11	True	AATAAA	-33	NA	38735686	38730191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38734812_38734871_38735501
transcript_49134.known	chr19	-	1118	7	FSM	ENSG00000182472.9	ENST00000593700.5	1118	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	12.3827837473378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATCAGAATAAACTCAAA	-10	True	NA	NA	False	AAGAAA	-6	NA	38735677	38730457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38735369
transcript_49137.nic	chr19	-	1412	7	NIC	ENSG00000182472.9	novel	3129	21	NA	NA	-33	0	intron_retention	FALSE	canonical	1	2	junction_4	11.1716406832459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTTTTAATTCTTTC	8874	False	NA	-11	True	AATAAA	-33	NA	38735710	38730191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734318_38734390_38734812_38734871_38735369
transcript_49138.nic	chr19	-	1249	7	NIC	ENSG00000182472.9	novel	3129	21	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	11.596215857866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTTTTAATTCTTTC	-23	True	NA	-11	True	AATAAA	-33	NA	38735690	38730191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369_38735430_38735501
transcript_49146.nnic	chr19	-	1134	5	NIC	ENSG00000182472.9	novel	3129	21	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	13.6014705087354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTTTTAATTCTTTC	8891	False	NA	-11	True	AATAAA	-33	NA	38735693	38730191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735501
transcript_49149.nnic	chr19	+	1267	3	NNC	ENSG00000130402.13	novel	441	3	NA	NA	-16	387	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	96.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCATCATCTTTT	-16	True	NA	23	True	AATAAA	-24	NA	38647632	38730531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_38647908_38700599_38700640_38729579
transcript_49150.known	chr19	-	1046	6	FSM	ENSG00000182472.9	ENST00000594552.5	1046	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	11.4647285183732	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	9174	False	NA	-6	True	AATAAA	-38	NA	38735410	38730186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369
transcript_49152.known	chr19	-	2142	13	FSM	ENSG00000104824.18	ENST00000221419.10	2142	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	404.498274615191	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-28	True	NA	0	True	AATAAA	-43	NA	38849986	38836369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_49154.known	chr19	-	1633	13	FSM	ENSG00000104824.18	ENST00000600873.5	1633	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	537.995217605758	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTCCTTTTTTTTTT	4	True	NA	-21	True	NA	NA	NA	38852338	38836634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_4916.known	chr1	-	4799	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCGTAAATACTTTTC	-16	True	NA	-11	True	ATTAAA	-16	NA	88992772	88979455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_88984067_88992584
transcript_49165.known	chr19	-	659	6	FSM	ENSG00000104824.18	ENST00000600233.5	659	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	729.725044109081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGTGGACAAGGTAAT	3275	False	NA	NA	False	NA	NA	NA	38849368	38843856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849307
transcript_49167.known	chr19	-	1127	6	FSM	ENSG00000104824.18	ENST00000601047.5	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	733.356829926605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGGTGAGACACTCTGG	4	True	NA	NA	False	NA	NA	NA	38852338	38843370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_49172.known	chr19	-	1200	10	FSM	ENSG00000104823.9	ENST00000221418.9	1200	10	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_8	46.5426924685522	1793	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTTCTTGGATA	0	True	NA	NA	False	AATAAA	-14	NA	38831794	38815421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_49173.nic	chr19	-	632	4	ISM	ENSG00000187994.14	ENST00000598904.5	1846	11	6688	0	-50	0	3prime_fragment	FALSE	canonical	3	25	junction_1	6.64997911442	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	-34	True	NA	NA	False	AAAACA	-19	NA	38870093	38868981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942
transcript_49174.known	chr19	-	1810	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTGTATGTTTGTGT	16	True	NA	-7	True	ATTAAA	-18	NA	38870043	38867833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38869411_38869572_38869705_38869942
transcript_49176.known	chr19	-	1862	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	20.862938964159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTCTGGCCTCCTGTTT	0	True	NA	-4	True	ATTAAA	-19	NA	38899618	38878559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
transcript_49177.nnic	chr19	-	1882	15	NNC	ENSG00000068903.21	novel	1862	16	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	18.8951186872187	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTCTGGCCTCCTGTTT	79	False	NA	-4	True	ATTAAA	-19	NA	38899733	38878559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880850_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
transcript_49178.known	chr19	-	2062	15	FSM	ENSG00000068903.21	ENST00000392081.6	2062	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	8.21676981072544	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	38899862	38878556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
transcript_49180.known	chr19	+	1192	6	FSM	ENSG00000104825.17	ENST00000313582.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	84.336468979914	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	-8	True	NA	16	True	AATAAA	-21	NA	38899968	38908889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_49182.known	chr19	-	1630	17	FSM	ENSG00000104835.15	ENST00000600042.5	1630	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	131.045063217773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCAGGAGACCCCGGAC	-8	True	NA	NA	False	NA	NA	NA	38930761	38915563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921597_38922001_38922079_38922237_38922268_38926204_38926301_38930469
transcript_49184.known	chr19	-	1924	16	FSM	ENSG00000104835.15	ENST00000221431.11	1924	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	85.4476837993088	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-10	True	NA	-4	True	AATAAA	-14	NA	38930763	38915265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_492.known	chr1	-	1614	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	220.62039655254	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-26	True	NA	-4	True	AATAAA	-17	NA	6385813	6264272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
transcript_49201.known	chr19	+	959	3	FSM	ENSG00000128626.12	ENST00000308018.9	959	3	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	188.5	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCTCTTTTTTTTTT	-11	True	NA	26	True	ATTAAA	-28	NA	38930943	38933168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38930999_38931275_38931344_38932332
transcript_49203.known	chr19	+	929	3	FSM	ENSG00000128626.12	ENST00000402029.3	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	250.5	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTGGAGTATTTGC	44	False	NA	26	True	AATAAA	-26	NA	38930998	38933020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_38931172_38931275_38931344_38932332
transcript_49206.known	chr19	+	2739	9	FSM	ENSG00000130669.17	ENST00000358301.7	2739	9	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_1	109.093709717838	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	10	True	NA	14	True	ATTAAA	-15	NA	39125801	39179402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39125920_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_49207.known	chr19	+	1715	8	FSM	ENSG00000130669.17	ENST00000599470.5	1715	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	180.135549868788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCCCTCCCCCATGTT	-10	True	NA	NA	False	NA	NA	NA	39125781	39178817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39125920_39169531_39169758_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_49209.known	chr19	-	173	1	FSM	ENSG00000269246.1	ENST00000599274.1	173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGATCTGTGCG	8	True	NA	-1	True	AATAAA	-19	NA	39341945	39341772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39341800_39341900
transcript_49211.known	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	12.8099443619484	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-25	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
transcript_49213.known	chr19	+	3590	4	FSM	ENSG00000063322.15	ENST00000315588.11	3590	4	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	18.8030730348939	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTCTTGTTTATAT	-20	True	NA	93	True	ATTAAA	-15	NA	39391377	39400641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397456
transcript_49217.known	chr19	+	1747	2	FSM	ENSG00000128016.7	ENST00000597629.3	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGATCCTGGCTTCTTC	1	True	NA	10	True	AATAAA	-15	NA	39406846	39409407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39406929_39407742
transcript_49218.known	chr19	+	1699	2	FSM	ENSG00000128016.7	ENST00000652583.1	1699	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTGGGCATTTTTAA	12	False	NA	27	True	AATATA	-38	NA	39406857	39409368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39406933_39407744
transcript_49222.known	chr19	-	631	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	0	0	0	multi-exon	TRUE	canonical	3	6641	junction_1	122.418340129247	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTCTGGATTTTGACC	-5	True	NA	-26	True	AGTAAA	-15	NA	39435949	39433136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
transcript_49223.known	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_3	2774.82026444957	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	3	True	NA	-33	True	AATAAA	-22	NA	39435941	39433216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
transcript_49224.known	chr19	-	407	4	FSM	ENSG00000105193.9	ENST00000599705.1	407	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	3259.96526907198	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTCACTTGTATAATA	9782	False	NA	-76	True	NA	NA	NA	39435705	39433259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433517_39433570_39433664_39433762_39435606
transcript_49225.known	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	140.330562126241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	8	True	NA	-23	True	AATAAA	-32	NA	39435936	39433206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
transcript_49226.known	chr19	-	2389	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	95.374117150421	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTTTCAAGAACTGT	-4	True	NA	-39	True	AATAAA	-16	NA	39435948	39433222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
transcript_49227.known	chr19	-	555	5	FSM	ENSG00000105193.9	ENST00000599539.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2983.88164770321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	0	True	NA	-23	True	AATAAA	-32	NA	39435915	39433206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39433419_39433493_39433570_39433664_39433762_39435606_39435709_39435847
transcript_49228.known	chr19	+	3678	30	FSM	ENSG00000196235.14	ENST00000432763.7	3678	30	0	0	0	0	multi-exon	TRUE	canonical	3	378	junction_1	91.2081806832227	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-12	True	NA	21	True	AATAAA	-22	NA	39445581	39476670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_49230.known	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	82.6586909143465	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-3	True	NA	21	True	AATAAA	-22	NA	39445683	39476670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_49231.known	chr19	+	3770	28	FSM	ENSG00000196235.14	ENST00000359191.10	3770	28	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	129.132953253274	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-6	True	NA	21	True	AATAAA	-22	NA	39445643	39476670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_49249.nnic	chr19	+	1309	12	NNC	ENSG00000105197.11	novel	2572	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	453.013564097366	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCCCGAGAGTCTCCA	7341	False	NA	28	True	AATAAA	-24	NA	39480829	39489928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485148_39485264_39485543_39485603_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_49251.known	chr19	+	5037	11	FSM	ENSG00000105197.11	ENST00000607714.6	5037	11	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_3	56.8971879797236	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-7	True	NA	16	True	AATAAA	-16	NA	39480837	39493779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485543_39485603_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_49260.known	chr19	+	1481	10	FSM	ENSG00000105197.11	ENST00000601358.5	1481	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	364.333316390498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCCCGAGAGTCTCCA	6995	False	NA	28	True	AATAAA	-24	NA	39480483	39489928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_49267.known	chr19	+	786	4	FSM	ENSG00000105197.11	ENST00000599794.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	548.654313348173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCCCTCTGACCA	-4	True	NA	-13	True	NA	NA	NA	39480840	39490119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39480962_39488060_39488218_39488538_39488646_39489718
transcript_49270.known	chr19	+	2004	9	FSM	ENSG00000090932.11	ENST00000356433.10	2004	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	25.406692031825	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGACTAACGAGGCTGA	-3	True	NA	18	True	TATAAA	-18	NA	39498946	39508469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829_39507915_39508251
transcript_49271.known	chr19	+	599	4	FSM	ENSG00000006659.13	ENST00000392052.8	599	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATGATTGGTTCTTGC	4	True	NA	NA	False	ATTAAA	-13	NA	39704480	39709444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39704544_39706596_39706674_39707177_39707389_39709196
transcript_49273.nnic	chr19	-	799	5	NNC	ENSG00000105205.7	novel	631	4	NA	NA	-496	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	4.06201920231798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTGGTTCTTGCTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	39738525	39731254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_39731506_39734282_39734494_39734996_39735074_39737937_39738014_39738341
transcript_49274.known	chr19	-	631	4	FSM	ENSG00000105205.7	ENST00000221804.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTGGTTCTTGCTTT	-4	True	NA	-3	True	ATTAAA	-17	NA	39738029	39731254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39731506_39734282_39734494_39734996_39735074_39737937
transcript_49283.known	chr19	-	1125	9	FSM	ENSG00000105202.9	ENST00000221801.8	1125	9	0	0	0	0	multi-exon	FALSE	canonical	3	1948	junction_7	265.37049572249	3270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-19	True	NA	-7	True	ATTAAA	-14	NA	39846379	39834457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
transcript_49290.known	chr19	-	603	5	FSM	ENSG00000105202.9	ENST00000594309.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	908.640020855344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGTAGATGGAGAG	3	True	NA	NA	False	NA	NA	NA	39846357	39839034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39839206_39840232_39840328_39840413_39840516_39840619_39840788_39846290
transcript_49292.known	chr19	-	896	6	FSM	ENSG00000105202.9	ENST00000595545.5	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	2519	junction_5	79.5401785263272	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	5919	False	NA	-7	True	ATTAAA	-14	NA	39840441	39834457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413
transcript_49293.known	chr19	-	12787	28	FSM	ENSG00000275395.7	ENST00000616721.6	12787	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	5.22340412157474	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTGTCTGTCTCAT	9489	False	NA	1	True	AATAAA	-20	NA	39934626	39863322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_39863497_39863620_39863893_39866736_39867121_39870215_39870416_39872077_39872652_39873223_39873796_39875387_39875932_39876657_39877275_39877662_39878237_39879554_39879893_39883304_39883447_39885672_39885873_39885990_39886586_39889478_39890072_39891642_39892187_39892910_39893528_39893921_39894496_39895805_39896144_39899555_39899698_39901924_39902125_39902242_39902838_39905730_39906324_39913689_39914258_39915184_39915790_39918071_39918643_39924382_39924733_39927058_39928307_39934563
transcript_49294.known	chr19	+	1754	11	FSM	ENSG00000013275.8	ENST00000157812.7	1754	11	0	0	0	0	multi-exon	TRUE	canonical	3	777	junction_6	111.310556552377	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGATGGATATGTTC	-16	True	NA	NA	False	NA	NA	NA	39971164	39981764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_49295.known	chr19	+	1333	11	FSM	ENSG00000013275.8	ENST00000455878.2	1333	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	307.832178304998	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	-11	True	NA	54	True	AATAAA	-19	NA	39971169	39981441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_39971239_39972145_39972245_39972461_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_49296.known	chr19	-	3472	6	FSM	ENSG00000197782.15	ENST00000595687.6	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	27.1587923148287	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGCACGTTTATTT	12	True	NA	72	True	AATATA	-35	NA	40090888	40073179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090793
transcript_49297.known	chr19	-	467	6	FSM	ENSG00000197782.15	ENST00000601688.5	467	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	24.2454119371068	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACAACTCTTGGCATT	-4	True	NA	-16	True	AGTAAA	-27	NA	40090938	40076122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_49299.known	chr19	-	8687	5	FSM	ENSG00000128000.17	ENST00000434248.6	8687	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	16.2076370887307	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCTTGCCATTTGAG	-31	True	NA	NA	False	AATAAA	-20	NA	40056231	40028259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40036627_40047374_40047471_40048669_40048797_40050323_40050378_40056188
transcript_49301.known	chr19	-	446	5	FSM	ENSG00000197782.15	ENST00000601715.5	446	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	26.9385875650525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	699	False	NA	-7	True	AGTAAA	-36	NA	40090235	40076113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165
transcript_49302.known	chr19	-	546	5	FSM	ENSG00000197782.15	ENST00000595773.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	32.6678358634299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTTGCAATACACATAA	-4	True	NA	NA	False	NA	NA	NA	40090938	40075973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090905
transcript_49305.known	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_13	15.4862030597271	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-12	True	NA	-5	True	AATAAA	-18	NA	40285345	40230316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
transcript_49307.known	chr19	-	1795	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	25.7158619446356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTCGCATTTGGAAG	57	False	NA	NA	False	NA	NA	NA	40285373	40233669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
transcript_49308.nnic	chr19	-	3032	12	NNC	ENSG00000105221.18	novel	1795	13	NA	NA	-517	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	33.0521751325346	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCCCAGCCTGCACT	9562	False	NA	-35	True	AATAAA	-15	NA	40255694	40232334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40255470
transcript_4931.known	chr1	+	9729	12	FSM	ENSG00000162664.17	ENST00000340281.9	9729	12	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_4	37.9355695623056	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTCCTGTCTGAAAAA	-35	True	NA	9	True	AATAAA	-16	NA	89995109	90035533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_49310.known	chr19	+	1906	13	FSM	ENSG00000105223.20	ENST00000356508.9	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	692.266206021932	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	14	True	NA	14	True	AGTAAA	-14	NA	40348699	40378483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40348725_40365552_40365586_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_49312.nic	chr19	+	1964	13	NIC	ENSG00000105223.20	novel	1906	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_2	627.858192366893	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	0	True	NA	14	True	AGTAAA	-14	NA	40348685	40378483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40348769_40365552_40365586_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_49314.nic	chr19	+	2309	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	465	junction_1	412.793128172777	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	0	True	NA	14	True	AGTAAA	-14	NA	40348685	40378483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40348769_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_49315.known	chr19	+	2180	13	FSM	ENSG00000105223.20	ENST00000409587.5	2180	13	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_2	675.155640492538	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	-1	True	NA	14	True	AGTAAA	-14	NA	40348684	40378483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40348769_40365717_40365931_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_49316.known	chr19	+	2137	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	491.042845777116	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCCTGACTGAGTGG	9	True	NA	16	True	AGTAAA	-16	NA	40348694	40378485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_49323.known	chr19	-	2126	9	FSM	ENSG00000160392.14	ENST00000392035.6	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	32.3950227658509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCCACTCCTTCA	3	True	NA	-16	True	AATATA	-18	NA	40348386	40321062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341785_40341891_40348323
transcript_49324.known	chr19	-	3611	9	FSM	ENSG00000160392.14	ENST00000683109.1	3611	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	14.7938965455353	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	-8	True	NA	NA	False	NA	NA	NA	40348397	40319535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
transcript_49325.known	chr19	-	3628	9	FSM	ENSG00000160392.14	ENST00000582783.5	3628	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	36.1954330682753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	1	True	NA	NA	False	NA	NA	NA	40348527	40319535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348436
transcript_49330.nic	chr19	-	796	5	NIC	ENSG00000105227.16	novel	475	3	NA	NA	-32	20	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	7.39932429347437	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTGTCTAAACACACAC	8431	False	NA	NA	False	AATAAA	-28	NA	40413410	40407265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_40407720_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_49331.nic	chr19	-	768	5	NIC	ENSG00000105227.16	novel	552	2	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	9.39081998549647	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAGAAAAAAAAAA	8431	False	NA	NA	False	AATAAA	-5	NA	40413410	40407288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_40407715_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_49332.known	chr19	-	2084	2	FSM	ENSG00000197019.5	ENST00000357949.5	2084	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGGCAAAGGATAGGG	0	True	NA	NA	False	AATAAA	-20	NA	40425992	40421588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40423547_40425866
transcript_49335.known	chr19	-	1364	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	-24	True	NA	-1	True	AATAAA	-17	NA	40444335	40440843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40442087_40444214
transcript_49336.known	chr19	-	747	2	FSM	ENSG00000167565.13	ENST00000599706.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTTGGGAGTGGAATG	249	False	NA	NA	False	NA	NA	NA	40444062	40441547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40442087_40443854
transcript_49337.known	chr19	-	799	5	FSM	ENSG00000090013.11	ENST00000263368.9	799	5	0	0	0	0	multi-exon	FALSE	canonical	1	133	junction_4	154.516180382509	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCTGTCTGAGTA	1	True	NA	16	True	NA	NA	NA	40465745	40447767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40448047_40451363_40451493_40458154_40458245_40458380_40458546_40465609
transcript_49339.known	chr19	-	767	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	221.456965345414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACCGACTGTGTGACT	453	False	NA	-11	True	AATAAA	-30	NA	40465759	40447794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
transcript_4934.known	chr1	+	9433	12	FSM	ENSG00000162664.17	ENST00000370447.3	9433	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	70.8999994171747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTCCTGTCTGAAA	-8	True	NA	7	True	AATAAA	-14	NA	89995136	90035531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007611_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_49343.known	chr19	+	525	4	FSM	ENSG00000160460.17	ENST00000599926.5	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.32049379893857	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAACACTGAGGACGC	NA	False	NA	NA	False	NA	NA	NA	40571038	40575663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40571094_40572018_40572193_40572337_40572381_40575410
transcript_49349.known	chr19	+	2341	18	FSM	ENSG00000160410.15	ENST00000291842.10	2341	18	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_11	41.2480050896456	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	0	True	NA	20	True	AATAAA	-15	NA	40576872	40591397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_49354.known	chr19	+	1993	16	FSM	ENSG00000160410.15	ENST00000600718.5	1993	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	154.765715410961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCCCCAATAAAGTCCT	16	False	NA	-9	True	NA	NA	NA	40576915	40591368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40590729_40590854_40590975
transcript_49357.nnic	chr19	+	2057	15	NIC	ENSG00000160410.15	novel	2284	18	NA	NA	-17	0	combination_of_known_splicesites	TRUE	canonical	3	21	junction_9	154.764534776188	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	NA	False	NA	20	True	AATAAA	-15	NA	40576835	40591397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_49360.known	chr19	+	2339	16	FSM	ENSG00000160410.15	ENST00000594973.5	2339	16	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_9	40.9029202978087	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGCTTATTCTTAG	49	False	NA	18	True	AATAAA	-13	NA	40577228	40591395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_49361.known	chr19	+	814	4	FSM	ENSG00000090006.18	ENST00000595529.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	7.11805216802087	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	896	False	NA	NA	False	NA	NA	NA	40606465	40608921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40606527_40607364_40607530_40608219_40608370_40608483
transcript_49363.known	chr19	-	2297	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_15	58.8304531872926	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	4	True	NA	11	True	AATAAA	-33	NA	40716882	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
transcript_49365.known	chr19	-	2237	15	FSM	ENSG00000123815.13	ENST00000678419.1	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	53.2050327525891	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1896	False	NA	11	True	AATAAA	-33	NA	40714990	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_49367.known	chr19	-	2201	15	FSM	ENSG00000123815.13	ENST00000601967.6	2201	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	53.6931949475301	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-10	True	NA	11	True	AATAAA	-33	NA	40715098	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
transcript_49368.known	chr19	-	2305	15	FSM	ENSG00000123815.13	ENST00000679130.1	2305	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	56.8778228723101	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1034	False	NA	11	True	AATAAA	-33	NA	40715852	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715706
transcript_49369.known	chr19	-	2443	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_14	41.9190789936214	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	0	True	NA	-5	True	AATAAA	-17	NA	40716886	40691529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_49370.known	chr19	-	2194	15	FSM	ENSG00000123815.13	ENST00000594720.6	2194	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	47.631932780522	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-10	True	NA	11	True	AATAAA	-33	NA	40716896	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_49376.known	chr19	-	2041	14	FSM	ENSG00000123815.13	ENST00000243583.10	2041	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	79.3898328637249	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	15	True	NA	-5	True	AATAAA	-17	NA	40715073	40691529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715052
transcript_49378.known	chr19	-	2335	14	FSM	ENSG00000123815.13	ENST00000679002.1	2335	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	49.0462889680602	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-8	True	NA	11	True	AATAAA	-33	NA	40716894	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_49380.known	chr19	-	2042	13	FSM	ENSG00000123815.13	ENST00000677517.1	2042	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	79.9376058769171	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-23	True	NA	11	True	AATAAA	-33	NA	40715111	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714277_40714398_40715056
transcript_49399.nic	chr19	+	1228	7	NIC	ENSG00000077312.9	novel	1277	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	597.874963702464	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	-4	True	NA	37	True	ATTAAA	-30	NA	40750842	40765389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40750978_40751386_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_494.known	chr1	-	1804	9	FSM	ENSG00000097021.20	ENST00000545482.5	1804	9	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_5	51.1246943756146	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-5	True	NA	-4	True	AATAAA	-17	NA	6393766	6264272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
transcript_49409.known	chr19	+	969	6	FSM	ENSG00000077312.9	ENST00000601393.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	647.451496252808	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCCAAGAAGTAGCAC	9	True	NA	NA	False	NA	NA	NA	40751208	40765150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40751482_40757331_40757442_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_49410.known	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_5	50.9768574943572	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	3	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_49411.known	chr19	-	3302	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	15.1340675299141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-9	True	NA	-9	True	AATAAA	-14	NA	40750477	40740860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
transcript_49413.known	chr19	-	2521	6	FSM	ENSG00000188493.15	ENST00000470681.5	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	25.4605577315188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	-24	True	NA	-4	True	AATAAA	-19	NA	40750492	40740855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_49418.known	chr19	-	2822	5	FSM	ENSG00000123815.13	ENST00000676651.1	2822	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	81.5276026876787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAAAATTAGCTGGA	0	True	NA	NA	False	ACTAAA	-1	NA	40716886	40707631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_49423.known	chr19	-	2107	14	FSM	ENSG00000123815.13	ENST00000594490.6	2107	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	75.9813898111448	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1948	False	NA	11	True	AATAAA	-33	NA	40714938	40691513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_49424.known	chr19	+	2774	12	FSM	ENSG00000171570.11	ENST00000594136.2	2774	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	401.016683150825	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGAGCTGCACACATC	2	True	NA	4	True	AATAAA	-6	NA	40778270	40808418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_49425.known	chr19	+	1173	8	FSM	ENSG00000167578.18	ENST00000594800.5	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	95.8627845902035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGACTGTAGCAGATCC	21	False	NA	NA	False	AATATA	-18	NA	40778215	40792572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40792216
transcript_49426.known	chr19	+	1159	8	FSM	ENSG00000167578.18	ENST00000357052.8	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	18.8127182338688	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCCTCCATTATTG	-22	True	NA	10	True	CATAAA	-17	NA	40778246	40796942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_49431.known	chr19	+	2100	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_1	75.5989417915357	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	-18	True	NA	20	True	AATAAA	-22	NA	40799190	40808434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_49432.nic	chr19	+	2269	6	NIC	ENSG00000269858.6	novel	2150	6	NA	NA	39	0	intron_retention	FALSE	canonical	3	28	junction_1	410.608134356834	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	-5	True	NA	18	True	AATAAA	-20	NA	40799463	40808432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_40799707_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_49433.known	chr19	+	2150	6	FSM	ENSG00000269858.6	ENST00000406058.6	2150	6	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	418.590778684863	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	-8	True	NA	18	True	AATAAA	-20	NA	40799514	40808432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_40799639_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_4944.known	chr1	+	1956	10	FSM	ENSG00000162664.17	ENST00000394583.7	1956	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	70.517137396995	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCCCTGGATTAGCAG	-33	True	NA	8	True	AATAAA	-17	NA	89995111	90028226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_89995274_89998109_89998155_90005002_90005093_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_49440.known	chr19	-	1004	3	FSM	ENSG00000237118.3	ENST00000641827.1	1004	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATGAGAGTCATTTA	318	False	NA	NA	False	ATTAAA	-1	NA	40826471	40818413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_40818900_40825119_40825262_40826095
transcript_49441.nic	chr19	+	1759	7	ISM	ENSG00000197838.5	ENST00000330436.4	1760	9	1233	0	1233	0	3prime_fragment	TRUE	canonical	1	1	junction_6	1.34370962471642	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTACCTCCGTGTCAGCT	1232	False	NA	NA	False	NA	NA	NA	41089683	41096195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_41090197_41090403_41090565_41091731_41091909_41093629_41093772_41094244_41094433_41094958_41095101_41095759
transcript_49443.known	chr19	+	2612	9	FSM	ENSG00000167600.14	ENST00000310054.9	2612	9	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_5	107.452024178235	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	7	True	NA	24	True	ATTAAA	-24	NA	41193218	41207539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_49444.nic	chr19	+	2687	9	NIC	ENSG00000167600.14	novel	759	6	NA	NA	-206	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	602.246627221772	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	273	False	NA	24	True	ATTAAA	-24	NA	41193515	41207539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_41193814_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_49445.nnic	chr19	+	2463	9	NNC	ENSG00000167600.14	novel	510	3	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	600.939888840806	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	734	False	NA	24	True	ATTAAA	-24	NA	41193976	41207539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_41194051_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_49450.known	chr19	+	759	6	FSM	ENSG00000167600.14	ENST00000595590.1	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	925.439657676285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAAGCGGAGCTCTTCCT	479	False	NA	NA	False	NA	NA	NA	41193721	41206308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41193814_41194543_41194710_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_49452.nic	chr19	+	2096	5	ISM	ENSG00000167600.14	ENST00000593545.5	1479	6	1107	-622	624	0	3prime_fragment	FALSE	canonical	3	45	junction_1	822.377650474525	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	1103	False	NA	24	True	ATTAAA	-24	NA	41194345	41207539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_41194710_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_49453.known	chr19	+	4717	20	FSM	ENSG00000167601.12	ENST00000301178.9	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_9	22.662891435107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	15	True	NA	17	True	CATAAA	-18	NA	41219222	41261766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_49454.known	chr19	+	3206	19	FSM	ENSG00000167601.12	ENST00000359092.7	3206	19	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	13.1656117720877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTTTTTTTTTTTTT	27	False	NA	19	True	ATTAAA	-19	NA	41219234	41260294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_49456.known	chr19	+	3426	15	FSM	ENSG00000105323.18	ENST00000352456.7	3426	15	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_13	302.034462150481	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	237	False	NA	19	True	NA	NA	NA	41262495	41307598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
transcript_49457.known	chr19	+	2794	15	FSM	ENSG00000105323.18	ENST00000595018.5	2794	15	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	228.689969261479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	-1	True	NA	20	True	NA	NA	NA	41262518	41307019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_49460.nic	chr19	+	2884	15	NIC	ENSG00000105323.18	novel	2725	15	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	299.139147541469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	176	False	NA	51	True	ATTAAA	-29	NA	41264998	41307050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_41265122_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_49464.known	chr19	+	1742	9	FSM	ENSG00000248098.12	ENST00000269980.7	1742	9	0	0	0	0	multi-exon	TRUE	canonical	3	485	junction_8	27.2921119556549	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	2	True	NA	40	True	AATAAA	-26	NA	41397817	41425002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_49465.nic	chr19	+	1714	9	NIC	ENSG00000248098.12	novel	1742	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	173.709527660402	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	352	False	NA	40	True	AATAAA	-26	NA	41397781	41425002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424501
transcript_49466.known	chr19	-	998	6	FSM	ENSG00000077348.10	ENST00000221233.9	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_4	23.3786227139239	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCTGTTGAGCACCC	4	True	NA	-16	True	AATAAA	-15	NA	41397359	41386373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41392866_41392981_41397180
transcript_49468.known	chr19	+	3329	5	FSM	ENSG00000142039.4	ENST00000269967.4	3329	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	20.1308221391974	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTATACGTAAATTTG	-39	True	NA	13	True	ATTAAA	-16	NA	41310171	41324873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41310357_41316383_41316840_41319573_41319853_41320340_41320471_41322594
transcript_49475.known	chr19	-	848	5	FSM	ENSG00000123810.9	ENST00000594416.1	848	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.5214154679352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGTCACCACCATCCACA	NA	False	NA	NA	False	NA	NA	NA	41364165	41354686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41355014_41357896_41358023_41362982_41363078_41363431_41363524_41363957
transcript_49481.known	chr19	+	650	4	FSM	ENSG00000142046.15	ENST00000413014.6	650	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	31.1376870617513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	61	False	NA	17	True	ATTAAA	-24	NA	41364055	41384083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41364096_41378280_41378520_41382771_41382922_41383862
transcript_49482.known	chr19	+	1080	4	FSM	ENSG00000142046.15	ENST00000392002.7	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	33.2365260920372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	13	True	NA	17	True	ATTAAA	-24	NA	41376532	41384083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383714
transcript_49483.known	chr19	+	725	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.7521042876493	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	1	True	NA	17	True	ATTAAA	-24	NA	41376739	41384083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
transcript_49484.known	chr19	+	721	4	FSM	ENSG00000142046.15	ENST00000447302.6	721	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	32.7651576458218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	-6	True	NA	17	True	ATTAAA	-24	NA	41376732	41384083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383873
transcript_49485.known	chr19	+	864	4	FSM	ENSG00000142046.15	ENST00000436170.6	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	25.694789787469	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	10	False	NA	17	True	ATTAAA	-24	NA	41376577	41384083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383885
transcript_49486.known	chr19	-	1007	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.09901951359278	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-10	True	NA	-1	True	AGTAAA	-20	NA	41364149	41354416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
transcript_49487.known	chr19	+	1843	3	FSM	ENSG00000142046.15	ENST00000539627.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	26	False	NA	17	True	ATTAAA	-24	NA	41350910	41384083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41351203_41378280_41378520_41382771
transcript_49488.known	chr19	+	1610	3	FSM	ENSG00000142046.15	ENST00000542945.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	34	True	NA	-6	True	ATTAAA	-1	NA	41376772	41384060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41376855_41378280_41378520_41382771
transcript_49491.known	chr19	-	421	3	FSM	ENSG00000123810.9	ENST00000601597.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGAGCCTGTTTCTT	9	True	NA	0	True	AATAAA	-16	NA	41364092	41361009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41361204_41363431_41363524_41363957
transcript_49494.known	chr19	-	826	5	FSM	ENSG00000077348.10	ENST00000596905.1	826	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	215.72436116489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATGGAATGGATGAAT	21	True	NA	-57	True	NA	NA	NA	41397342	41386414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41397180
transcript_49495.known	chr19	-	1874	3	FSM	ENSG00000177191.3	ENST00000321702.2	1874	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGGTTGTTTTTGCA	7748	False	NA	-1	True	AAAACA	-18	NA	41428730	41425358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41426811_41427283_41427571_41428595
transcript_49496.known	chr19	-	463	2	FSM	ENSG00000177191.3	ENST00000601379.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGAGCTCAGGACGA	26	True	NA	NA	False	NA	NA	NA	41427362	41426055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41426440_41427283
transcript_49499.known	chr19	-	1065	6	FSM	ENSG00000105341.19	ENST00000417807.7	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	135.320951814566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGGCTGTTAGTA	-1	True	NA	NA	False	NA	NA	NA	41439539	41431987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_49500.known	chr19	-	1700	6	FSM	ENSG00000105341.19	ENST00000221943.14	1700	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	76.9919476309049	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	3	True	NA	-1	True	ATTAAA	-19	NA	41439912	41431317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_49506.known	chr19	-	1622	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	81.3664550045042	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	NA	False	NA	-22	True	NA	NA	NA	41439936	41431338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
transcript_49508.known	chr19	-	1134	5	FSM	ENSG00000105341.19	ENST00000301183.15	1134	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	148.860673114157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCATAGTATTGCTGG	-1	True	NA	NA	False	ACTAAA	-15	NA	41439539	41431755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_49509.known	chr19	-	979	5	FSM	ENSG00000105341.19	ENST00000589970.5	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	50.8379779298902	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACTACTGACACTTT	7	True	NA	NA	False	NA	NA	NA	41439908	41431871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_49514.nic	chr19	-	2590	5	NIC	ENSG00000105341.19	novel	1700	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	221	junction_1	66.3037517792168	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTGGTTTTTCTCTCC	NA	False	NA	-2	True	ATTAAA	-18	NA	41439940	41431318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_49517.known	chr19	-	1454	4	FSM	ENSG00000105341.19	ENST00000438807.7	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	97.6057830709271	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	5	True	NA	-1	True	ATTAAA	-19	NA	41439910	41431317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41432409_41433536_41433674_41438217_41438415_41439881
transcript_49519.known	chr19	-	1026	4	FSM	ENSG00000105341.19	ENST00000590641.6	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	84.5550445305042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAAATTTGGGGCCAGT	339	False	NA	NA	False	NA	NA	NA	41439576	41432845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41433435_41433536_41433674_41438217_41438415_41439473
transcript_49520.known	chr19	-	572	4	FSM	ENSG00000105341.19	ENST00000595425.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	93.8947401201059	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCCAGATGCAGGAGAG	7	True	NA	NA	False	NA	NA	NA	41439908	41433223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41433435_41433536_41433674_41438217_41438415_41439881
transcript_49522.known	chr19	+	601	2	FSM	ENSG00000268027.5	ENST00000601116.5	601	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATAGTGTGCCCAGAT	2	True	NA	NA	False	NA	NA	NA	41549519	41550705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41549553_41550137
transcript_49524.known	chr19	+	668	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	13167.7527558806	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	-1	True	NA	31	True	AATAAA	-16	NA	41860254	41871416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_49525.known	chr19	+	526	6	FSM	ENSG00000105372.8	ENST00000593863.5	526	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	13256.6799101434	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	15	True	NA	31	True	AATAAA	-16	NA	41860445	41871416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860495_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_49528.known	chr19	+	500	6	FSM	ENSG00000105372.8	ENST00000221975.6	500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13281.5229909826	20545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	1	True	NA	31	True	AATAAA	-16	NA	41860256	41871416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860290_41860784_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_49529.known	chr19	+	2021	6	FSM	ENSG00000105372.8	ENST00000598742.6	2021	6	0	0	0	0	multi-exon	FALSE	canonical	3	22127	junction_5	5790.38905774042	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTGTTTACACTCAGCAA	-1	True	NA	13	True	AATAAA	-14	NA	41860254	41872925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41860290_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_49532.known	chr19	+	3229	29	FSM	ENSG00000076928.18	ENST00000354532.8	3229	29	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_1	31.4068106483616	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	-25	True	NA	32	True	AATATA	-16	NA	41883183	41907452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_49533.known	chr19	+	3171	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	33.3016516106934	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	31	True	NA	34	True	AATATA	-18	NA	41884447	41907454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_49534.known	chr19	-	3551	23	FSM	ENSG00000105409.19	ENST00000648268.1	3551	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_15	18.6722492635993	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-3	True	NA	-1	True	AATATA	-18	NA	41994230	41966581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
transcript_49535.known	chr19	-	653	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	642.117347141471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	9624	False	NA	-16	True	AATAAA	-28	NA	41959266	41956680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_49536.known	chr19	-	750	5	FSM	ENSG00000105404.11	ENST00000222008.11	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_2	153.451946875887	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCCCAGCATCTTCTG	7	True	NA	-18	True	AATAAA	-26	NA	41959321	41956682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_49538.known	chr19	-	628	4	FSM	ENSG00000105404.11	ENST00000601891.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	774.081103990761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	29	True	NA	-16	True	AATAAA	-28	NA	41959299	41956680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_41956935_41958285_41958384_41958735_41958949_41959236
transcript_49543.known	chr19	+	3087	2	FSM	ENSG00000105732.13	ENST00000359044.5	3087	2	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGAGTGGAATTTGG	-7	True	NA	9	True	AATAAA	-17	NA	42076165	42081552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42076287_42078586
transcript_4955.known	chr1	-	2467	2	FSM	ENSG00000233593.11	ENST00000670437.1	2467	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTCATGCTCTGTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	90836174	90830078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90832197_90835825
transcript_49550.nic	chr19	-	930	4	ISM	ENSG00000028277.22	ENST00000529952.5	1716	13	36511	1652	-351	0	internal_fragment	FALSE	canonical	3	11	junction_2	3.09120616516523	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATACATGTATGTAAGA	NA	False	NA	NA	False	ATTAAA	-31	NA	42095962	42093466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_42093896_42095285_42095463_42095544_42095694_42095787
transcript_49552.known	chr19	-	3524	10	FSM	ENSG00000105723.13	ENST00000398249.8	3524	10	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	23.633518778983	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	8487	False	NA	-5	True	AATAAA	-16	NA	42241893	42230189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954
transcript_49553.known	chr19	-	1586	4	FSM	ENSG00000160570.14	ENST00000593804.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	76.2291865946954	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCATAGGTGGGCATC	2413	False	NA	-32	True	ATTAAA	-10	NA	42217742	42198615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42217631
transcript_49554.nnic	chr19	-	888	4	NNC	ENSG00000105723.13	novel	2193	11	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	214.906181080644	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	8	True	NA	-5	True	AATAAA	-16	NA	42242595	42230189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_42230868_42232056_42232150_42232495_42232545_42242527
transcript_49555.known	chr19	-	555	4	FSM	ENSG00000105722.10	ENST00000593944.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	49.0713765855412	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTGTGGTGGCCCGCCG	1	True	NA	NA	False	NA	NA	NA	42253899	42249592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42253841
transcript_49557.known	chr19	+	3982	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	-8	True	NA	NA	False	NA	NA	NA	42220311	42228201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42220388_42224214_42224306_42224386
transcript_49562.known	chr19	-	1098	6	FSM	ENSG00000079462.8	ENST00000538771.5	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	230.58967886703	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	9	True	NA	-22	True	ATTAAA	-17	NA	42302777	42297032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
transcript_49564.known	chr19	-	582	6	FSM	ENSG00000079462.8	ENST00000595530.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	351.865883540874	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCGGGCCCACTTCC	16	True	NA	NA	False	NA	NA	NA	42302770	42297279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_49566.known	chr19	-	465	6	FSM	ENSG00000079462.8	ENST00000596265.5	465	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	439.951997381533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTGAACGAGCTGGTAC	58	False	NA	NA	False	NA	NA	NA	42302728	42297315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42300008_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_4957.known	chr1	-	5541	6	FSM	ENSG00000122482.22	ENST00000337393.10	5541	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_5	52.0099990386464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-10	True	NA	-27	True	AATAAA	-18	NA	91022035	90915303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021989
transcript_49570.known	chr19	-	1054	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_1	34.6292867382509	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTTCCTGCTTTAT	-15	True	NA	-24	True	ATTAAA	-15	NA	42302624	42297034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
transcript_49573.known	chr19	-	649	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	395.598913041985	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTTCCTGCTTTA	494	False	NA	-25	True	ATTAAA	-14	NA	42302292	42297035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
transcript_49579.known	chr19	+	1523	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	6	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	-4	True	NA	6	True	AATAAA	-16	NA	42302131	42310814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42302504_42309578_42310186_42310270
transcript_49584.known	chr19	+	1641	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	NA	False	NA	5	True	AATAAA	-15	NA	42302097	42310813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42302504_42309578
transcript_49585.nic	chr19	-	386	2	ISM	ENSG00000105427.10	ENST00000222032.10	533	4	2796	0	2767	0	3prime_fragment	FALSE	canonical	3	245	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTACATCCATTTTG	2793	False	NA	-10	True	AATAAA	-15	NA	42387501	42387018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_42387243_42387339
transcript_49587.known	chr19	+	292	2	FSM	ENSG00000213904.10	ENST00000593491.3	306	2	14	0	14	0	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGCTCTCGGCTGGT	1	True	NA	17	True	AGTAAA	-27	NA	42397127	42408452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_42397225_42408257
transcript_49588.known	chr19	-	3427	8	FSM	ENSG00000079385.23	ENST00000403444.7	3427	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCGACATGCTGCCTCA	-9	True	NA	-8	True	AATAAA	-13	NA	42528478	42507313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_42509229_42510888_42510921_42512349_42512480_42518947_42519236_42521266_42521522_42521923_42522203_42527040_42527401_42528310
transcript_4959.known	chr1	-	851	5	FSM	ENSG00000122482.22	ENST00000467231.5	851	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.224944017901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTAGTGTTTTGTATAA	11	True	NA	NA	False	NA	NA	NA	91022014	90916389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90916991_90918051_90918155_90973152_90973214_90982309_90982371_91021989
transcript_49590.known	chr19	-	301	2	FSM	ENSG00000231412.3	ENST00000595748.2	721	2	114	306	114	-306	multi-exon	TRUE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGAAAAGGCCCTG	107	False	NA	NA	False	NA	NA	NA	43331430	43329294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43329509_43331343
transcript_49591.known	chr19	+	2195	9	FSM	ENSG00000204936.10	ENST00000618265.5	2195	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	4	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGTTCTATACGCAATT	-1	True	NA	23	True	CATAAA	-24	NA	43353685	43363172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43353767_43353852_43353994_43354206_43354393_43355660_43355784_43355991_43356109_43360264_43360406_43361142_43361329_43361444_43361580_43362087
transcript_49594.known	chr19	-	574	3	FSM	ENSG00000124466.9	ENST00000594326.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCACTCGGGATGGAGT	6359	False	NA	NA	False	GGGGCT	-15	NA	43463963	43461800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43461848_43463125_43463288_43463598
transcript_49595.nic	chr19	-	1299	2	ISM	ENSG00000124466.9	ENST00000594326.1	574	3	600	-1014	600	0	3prime_fragment	FALSE	canonical	3	37	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-8	True	NA	-7	True	AATAAA	-23	NA	43463363	43460786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_43461848_43463125
transcript_49596.known	chr19	-	1642	5	FSM	ENSG00000124466.9	ENST00000244333.4	1642	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.9104277432436	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-2	True	NA	-7	True	AATAAA	-23	NA	43465608	43460786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43461848_43463125_43463288_43463598_43463770_43464324_43464457_43465492
transcript_49598.nnic	chr19	-	942	7	NNC	ENSG00000105755.8	novel	920	7	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	47.2772555135013	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-14	True	NA	-3	True	AATAAA	-17	NA	43527256	43506718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526317_43526514_43526660_43527096
transcript_49599.nic	chr19	-	1081	7	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	46.9766490456222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	3	True	NA	-3	True	AATAAA	-17	NA	43527202	43506718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43526936
transcript_49600.known	chr19	-	920	7	FSM	ENSG00000105755.8	ENST00000292147.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	22.6274169979695	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	4	True	NA	-3	True	AATAAA	-17	NA	43527201	43506718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43527096
transcript_49602.known	chr19	-	702	6	FSM	ENSG00000105755.8	ENST00000594342.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	47.2922826685285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGACACTGCACCTCT	0	True	NA	-76	True	NA	NA	NA	43527205	43506791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526514_43526660_43527096
transcript_49605.nnic	chr19	-	626	5	NIC	ENSG00000105755.8	novel	920	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	55.8233821977852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	4	True	NA	-3	True	AATAAA	-17	NA	43527201	43506718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43527096
transcript_49608.known	chr19	-	2052	17	FSM	ENSG00000073050.12	ENST00000262887.10	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	20.4110111214511	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-1	True	NA	-21	True	AATAAA	-17	NA	43575527	43543310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_49609.nic	chr19	-	856	8	ISM	ENSG00000073050.12	ENST00000262887.10	2052	17	-31	9553	5	127	5prime_fragment	FALSE	canonical	3	187	junction_1	17.7637558080537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGAAGACCCCCAG	-32	True	NA	NA	False	NA	NA	NA	43575558	43552863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_49611.nic	chr19	+	960	5	ISM	ENSG00000234465.11	ENST00000612042.4	914	6	144	5	144	0	3prime_fragment	FALSE	canonical	3	6	junction_2	36.3275033548963	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	147	False	NA	NA	False	TATAAA	-17	NA	43576943	43582098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_43577262_43578589_43578707_43581211_43581365_43581562_43581704_43581867
transcript_49613.known	chr19	+	569	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.5592345297419	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	3747	False	NA	NA	False	TATAAA	-17	NA	43580543	43582098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
transcript_49615.known	chr19	+	557	4	FSM	ENSG00000234465.11	ENST00000569031.6	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	28.3901391331568	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	89	False	NA	NA	False	TATAAA	-17	NA	43580637	43582098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43580670_43581211_43581365_43581562_43581704_43581867
transcript_49616.nnic	chr19	+	857	4	NNC	ENSG00000234465.11	novel	557	4	NA	NA	41	3557	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	29.8030572630095	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCATGGTAATTGAGAT	36	False	NA	NA	False	AATAAA	-23	NA	43580584	43587521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_43580670_43581211_43581365_43581562_43581704_43587043
transcript_49617.known	chr19	+	706	3	FSM	ENSG00000234465.11	ENST00000562365.2	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTGGTGTGATGTAT	488	False	NA	NA	False	TATAAA	-23	NA	43581036	43582104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43581365_43581562_43581704_43581867
transcript_49619.known	chr19	+	1468	3	FSM	ENSG00000124444.16	ENST00000391965.6	1468	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	51	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTTTGAGTGGGA	72	False	NA	10	True	ATTAAA	-16	NA	43596391	43600004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43596586_43597093_43597194_43598830
transcript_4962.known	chr1	-	2036	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	91.6854526204797	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	27	True	NA	-27	True	AATAAA	-18	NA	91021457	90915303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
transcript_49621.known	chr19	+	830	3	FSM	ENSG00000124444.16	ENST00000529930.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGCTTCAGTCTTTGG	-20	True	NA	21	True	AATAAA	-21	NA	43596594	43599414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43596744_43597096_43597194_43598830
transcript_49624.known	chr19	+	859	3	FSM	ENSG00000124444.16	ENST00000528387.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTCTCCCTTATT	49	False	NA	NA	False	NA	NA	NA	43596574	43599525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43596639_43597093_43597194_43598830
transcript_49628.known	chr19	-	2189	9	FSM	ENSG00000105767.3	ENST00000222374.3	2189	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	16.4829457318769	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGGGTGGCTGTGTG	-28	True	NA	NA	False	ATTAAA	-16	NA	43639850	43622367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43623440_43624113_43624243_43625077_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
transcript_4963.known	chr1	-	1253	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	81.7081527280003	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCTAAAAGAAATATGT	16	False	NA	NA	False	AAAAAG	-25	NA	91022272	90916184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
transcript_49633.known	chr19	-	1254	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	34.6333974975344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGGCATGCCTGTG	1	True	NA	NA	False	AATAAA	-16	NA	43670166	43646094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_49635.nic	chr19	-	1846	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	33.5939809423586	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	6012	False	NA	-21	True	CATAAA	-17	NA	43668359	43648579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43667776
transcript_49637.nnic	chr19	-	1426	7	NNC	ENSG00000011422.12	novel	1368	7	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	39.4363058896523	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	6160	False	NA	-21	True	CATAAA	-17	NA	43668211	43648579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668048
transcript_49638.nnic	chr19	-	1356	7	NNC	ENSG00000011422.12	novel	1368	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	39.8026381035227	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	18	True	NA	-21	True	CATAAA	-17	NA	43668264	43648579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668171
transcript_49639.nic	chr19	-	1347	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	35.0507568471147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	6011	False	NA	-21	True	CATAAA	-17	NA	43668360	43648579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668276
transcript_49640.known	chr19	-	1368	7	FSM	ENSG00000011422.12	ENST00000340093.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	17.2626765016321	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-2	True	NA	-20	True	CATAAA	-18	NA	43670169	43648578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_49645.known	chr19	-	1205	6	FSM	ENSG00000011422.12	ENST00000601723.5	1205	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.4207323752145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	4218	False	NA	-20	True	CATAAA	-18	NA	43670153	43648578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43649144_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_49648.known	chr19	-	5491	14	FSM	ENSG00000105771.14	ENST00000270066.11	5491	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	28.4157636058188	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCGATTGGTCTCTAT	-27	True	NA	NA	False	AATAAA	-29	NA	43754962	43727982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_49649.nnic	chr19	-	2260	13	NIC	ENSG00000105771.14	novel	5491	14	NA	NA	-53	236	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	39.4935824603891	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTCTTATGTTCCACT	-1	True	NA	-7	True	AATAAA	-14	NA	43755015	43731153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_49651.known	chr19	+	2462	7	FSM	ENSG00000167637.18	ENST00000650832.1	2462	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATATAATTAATATGAAA	7	True	NA	NA	False	NA	NA	NA	43827377	43848809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43827445_43827775_43827941_43828201_43828282_43831317_43831382_43835504_43835593_43837052_43837180_43846938
transcript_49659.nic	chr19	-	2807	5	Fusion	ENSG00000176222.9_ENSG00000267058.1	novel	1849	3	NA	NA	-15	0	multi-exon	FALSE	canonical	3	13	junction_2	4.7169905660283	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTATGAGTGTGATATT	-10	True	NA	-9	True	AATAAA	-15	NA	43901820	43872364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_43874078_43880009_43880137_43883955_43884052_43900867_43900955_43901036
transcript_49661.known	chr19	-	2193	3	FSM	ENSG00000267058.1	ENST00000587128.1	2193	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACACCTTTTATTTTTTC	5	True	NA	NA	False	AATAAA	-21	NA	43901805	43891803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43893141_43900867_43900955_43901036
transcript_49663.nnic	chr19	-	2094	3	Fusion	ENSG00000286613.1_ENSG00000267058.1	novel	504	2	NA	NA	-15	-922	multi-exon	FALSE	canonical	1	1	junction_1	12	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTATATGGATGCCCTGT	-10	True	NA	NA	False	ATTAAA	-16	NA	43901820	43898132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_43899356_43900867_43900955_43901036
transcript_49665.known	chr19	-	504	2	FSM	ENSG00000267058.1	ENST00000591815.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTGAAAGAGGAAAGAATT	299	False	NA	NA	False	AAAAAG	-2	NA	43901511	43900917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43900955_43901044
transcript_49668.nnic	chr19	+	397	2	NNC	ENSG00000267191.3	novel	413	2	NA	NA	0	3989	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTAATTTTTGTAT	-11	True	NA	NA	False	ATTAAA	-15	NA	43901865	43906325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_43902132_43906194
transcript_49673.known	chr19	+	2222	6	FSM	ENSG00000204920.11	ENST00000407951.6	2222	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	18.2975408183723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCAGACACAGAAATGC	-9	True	NA	NA	False	NA	NA	NA	43984193	43997853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43984246_43988458_43988559_43990023_43990113_43991547_43991675_43991841_43991935_43996092
transcript_49674.nnic	chr19	+	2557	6	NNC	ENSG00000204920.11	novel	2612	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.5903200617956	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	-15	True	NA	42	True	ATTAAA	-18	NA	43984187	43998326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_43984246_43988458_43988559_43991547_43991675_43991841_43991935_43996092_43998000_43998054
transcript_49676.known	chr19	+	576	5	FSM	ENSG00000204920.11	ENST00000591532.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	18.9390469665187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAAACAGTCCAT	-12	True	NA	NA	False	NA	NA	NA	43984190	43996307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43984232_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_49678.known	chr19	+	2612	5	FSM	ENSG00000204920.11	ENST00000270014.7	2612	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	9.57535900110278	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	-15	True	NA	42	True	ATTAAA	-18	NA	43984187	43998326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43984246_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_49679.known	chr19	+	1888	5	FSM	ENSG00000204920.11	ENST00000590615.5	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	17.2970373185699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTACCTCAAACATTT	14	True	NA	NA	False	NA	NA	NA	43984216	43997554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43984323_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_49680.known	chr19	+	559	5	FSM	ENSG00000204920.11	ENST00000586454.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.765816451642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTATCATAAATAACTCT	18	True	NA	NA	False	NA	NA	NA	43984220	43996203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_49681.known	chr19	+	4104	5	FSM	ENSG00000159882.13	ENST00000429154.7	4104	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	6.29980158417708	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGTAAGTTCACAATG	-19	True	NA	NA	False	AATAAA	-18	NA	44002956	44013924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44003108_44007010_44007094_44008789_44008917_44009083_44009171_44010268
transcript_49683.known	chr19	+	1794	1	FSM	ENSG00000159882.13	ENST00000589275.1	1794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAACTGCCATATTAT	-17	True	NA	NA	False	AATAAA	-1	NA	44002958	44004752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44003000_44004800
transcript_49684.known	chr19	-	400	2	FSM	ENSG00000266921.2	ENST00000670660.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAGGCTTCTCTCCAA	NA	False	NA	NA	False	AGTAAA	-17	NA	44002858	43999067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_43999233_44002623
transcript_49686.known	chr19	+	895	6	FSM	ENSG00000178386.13	ENST00000593088.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	17.7696370249929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAGGTTGAGGAAGGA	32	False	NA	NA	False	CATAAA	-33	NA	44052061	44066219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44063264_44063567_44066063
transcript_49688.known	chr19	+	2399	5	FSM	ENSG00000178386.13	ENST00000434772.8	2399	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.75925291729789	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGTTTCTGGAAT	6	True	NA	NA	False	AATAAA	-27	NA	44052035	44067999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44066063
transcript_49689.known	chr19	+	4336	5	FSM	ENSG00000186026.7	ENST00000421176.4	4336	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.11803398874989	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGGTGCATCACATTT	-8	True	NA	7	True	AATAAA	-19	NA	44072158	44089613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44072292_44076321_44076405_44081014_44081142_44082012_44082106_44085713
transcript_4969.nic	chr1	-	3639	4	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-157	22611	95	3040	5prime_fragment	FALSE	canonical	3	83	junction_3	54.0514158515349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAAAAATCTTAAAGGC	658	False	NA	NA	False	AAGAAA	-3	NA	91021630	90937908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_90938091_90938271_90941310_90982309_90982371_91021272
transcript_49692.known	chr19	+	1614	4	FSM	ENSG00000159885.14	ENST00000391960.4	1614	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.32049379893857	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	20	True	NA	9	True	ATTAAA	-22	NA	44025378	44033110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44025479_44027022_44027150_44027397_44027491_44031816
transcript_49694.nic	chr19	+	1580	3	NIC	ENSG00000159885.14	novel	1598	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	NA	False	NA	9	True	ATTAAA	-22	NA	44025319	44033110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_44025479_44027022_44027150_44031816
transcript_49695.nic	chr19	+	2507	6	FSM	ENSG00000267680.6	ENST00000693561.1	3993	6	-18	1504	-18	-4	multi-exon	FALSE	canonical	3	21	junction_1	19.825236442474	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGCAGTCTCATCTGAA	6723	False	NA	5	True	AATAAA	-19	NA	44094342	44108322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44094531_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_49698.known	chr19	+	3980	6	FSM	ENSG00000267680.6	ENST00000336976.10	3980	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	15.9824904192056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCAGGCATTTT	-2	True	NA	75	True	AATGAA	-26	NA	44094391	44109886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_49700.known	chr19	+	4447	5	FSM	ENSG00000256294.8	ENST00000262894.11	4447	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	4.55521678957215	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGTGGGGCTAATATT	-17	True	NA	19	True	ATTAAA	-28	NA	44113398	44134822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44113570_44115759_44115843_44118187_44118315_44118481_44118575_44130849
transcript_49702.known	chr19	-	3199	2	FSM	ENSG00000186019.12	ENST00000592946.1	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTACTCTTCCTAGTGA	6	True	NA	NA	False	AATAAA	-43	NA	44113145	44105462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44108338_44112821
transcript_49703.known	chr19	+	1552	1	FSM	ENSG00000267680.6	ENST00000589060.1	1552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTTTTTATTACCTA	-4	True	NA	NA	False	AAAAAG	-3	NA	44094389	44095941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44094400_44095900
transcript_49704.known	chr19	+	2292	6	FSM	ENSG00000263002.8	ENST00000592437.5	2292	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	10.2058806577385	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAACAGAA	-3	True	NA	NA	False	NA	NA	NA	44141556	44158119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_49706.nnic	chr19	+	902	6	NNC	ENSG00000263002.8	novel	4607	6	NA	NA	22	1062	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	19.3349424617711	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTTCAGTTCTTTGTT	-27	True	NA	NA	False	ATTAAA	-14	NA	44141578	44151567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44151185
transcript_49707.known	chr19	+	4607	6	FSM	ENSG00000263002.8	ENST00000426739.7	4607	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	14.4166570327521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGTCAATGAATTG	-6	True	NA	9	True	ATTAAA	-25	NA	44141553	44160313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_4971.nic	chr1	-	3441	4	ISM	ENSG00000122482.22	ENST00000337393.10	5541	6	-114	22605	-68	3040	5prime_fragment	FALSE	canonical	3	128	junction_3	32.8870119584549	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAAAAATCTTAAAGGC	139	False	NA	NA	False	AAGAAA	-3	NA	91022149	90937908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_90938091_90938271_90941310_90982309_90982371_91021989
transcript_49710.known	chr19	+	567	7	FSM	ENSG00000167380.17	ENST00000588127.5	567	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	53.3843505991118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAATTTCTGAAGATGA	21	True	NA	NA	False	NA	NA	NA	44165115	44175679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_49712.known	chr19	+	2788	7	FSM	ENSG00000167380.17	ENST00000590089.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	61.816035316269	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCGTGTCATTTGAAT	20	False	NA	12	True	TATAAA	-14	NA	44165154	44177683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165247_44165756_44165808_44166704_44166883_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_49713.known	chr19	+	817	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	47.1822000334872	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	9	True	NA	NA	False	ATTAAA	-16	NA	44165103	44175429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_49714.known	chr19	+	579	6	FSM	ENSG00000167380.17	ENST00000585678.5	579	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	38.6905673259	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCAGATGGTCCCAA	12	True	NA	NA	False	NA	NA	NA	44165106	44175712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172091_44172215_44172859_44172953_44175497
transcript_49715.known	chr19	+	716	6	FSM	ENSG00000167380.17	ENST00000413984.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	52.4228957612988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTAAACTGTGAGCA	8	True	NA	-79	True	NA	NA	NA	44165102	44175158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_49716.known	chr19	+	576	6	FSM	ENSG00000167380.17	ENST00000586914.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	47.2508200987031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAGAGAATCAGAAGAA	6	True	NA	NA	False	NA	NA	NA	44165100	44175530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_49717.known	chr19	+	2605	6	FSM	ENSG00000167380.17	ENST00000454662.6	2605	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	51.5037862685842	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGTCATTTGAATTCTT	29	False	NA	16	True	TATAAA	-18	NA	44165163	44177687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44165247_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_49720.known	chr19	+	3049	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	13.2875881934985	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	-21	True	NA	16	True	AATAAA	-21	NA	44212531	44237268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_49724.known	chr19	+	569	6	FSM	ENSG00000131115.16	ENST00000586228.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	19.7322071750729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTTATTACAAGGTGA	-15	True	NA	89	True	NA	NA	NA	44212537	44234835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228486_44228573_44229732_44229817_44234701
transcript_49725.known	chr19	+	2943	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.1081121109256	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	22	True	NA	15	True	AATAAA	-20	NA	44212574	44237267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
transcript_49727.known	chr19	+	2757	5	FSM	ENSG00000159915.13	ENST00000683810.1	2757	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.53553390593274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCTACAATCTGAGTAA	-13	True	NA	3	True	ATTAAA	-15	NA	44259885	44275317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44259939_44264313_44264376_44266197_44266325_44266865_44266962_44272898
transcript_49728.known	chr19	+	2784	5	FSM	ENSG00000159915.13	ENST00000391958.6	2784	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.21416340365355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCTACAATCTGAGTAA	24	False	NA	3	True	ATTAAA	-15	NA	44259922	44275317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44260003_44264313_44264376_44266197_44266325_44266865_44266962_44272898
transcript_49732.known	chr19	-	3162	5	FSM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.52268050859363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATTGTTAATACTTG	-13	True	NA	NA	False	AAAAAG	-12	NA	44305025	44286363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44289197_44298819_44298904_44299605_44299733_44303389_44303453_44304970
transcript_49733.known	chr19	+	584	4	FSM	ENSG00000131115.16	ENST00000588219.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	10.4986771653491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTTGCGGGAATACATA	-15	True	NA	NA	False	NA	NA	NA	44212537	44234955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44234701
transcript_49734.nic	chr19	-	750	4	ISM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	12035	0	-9594	5prime_fragment	FALSE	canonical	3	21	junction_3	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAACATCTGTCACA	-13	True	NA	NA	False	NA	NA	NA	44305025	44298398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_44298904_44299605_44299733_44303389_44303453_44304970
transcript_49735.known	chr19	-	3190	5	FSM	ENSG00000159917.17	ENST00000291182.9	3190	5	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	8.0156097709407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	-13	True	NA	NA	False	AGTAAA	-16	NA	44305025	44286347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44289197_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_4974.known	chr1	-	514	3	FSM	ENSG00000122482.22	ENST00000498303.5	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAACCACTGGACA	-4	True	NA	NA	False	AATAAA	-7	NA	91022081	90940948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_90941310_90982309_90982371_91021989
transcript_49740.known	chr19	-	2388	5	FSM	ENSG00000267508.6	ENST00000591679.5	2388	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.92442890089805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACACTGGTTCCATTTC	37	False	NA	NA	False	NA	NA	NA	44401575	44385928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44388103_44392339_44392467_44394519_44394541_44397198_44397257_44401567
transcript_49742.known	chr19	-	3660	4	FSM	ENSG00000062370.17	ENST00000354340.9	3660	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	8.17856276425687	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGGGTTTTTTTATTC	-1	True	NA	-2	True	AATAAA	-15	NA	44356680	44326554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44329937_44336622_44336719_44340415_44340543_44356625
transcript_49743.known	chr19	-	6031	4	FSM	ENSG00000267508.6	ENST00000614994.5	6031	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCCCTTATGTGTGA	4	True	NA	NA	False	NA	NA	NA	44401608	44382297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44388103_44392339_44392467_44397198_44397257_44401567
transcript_49744.known	chr19	-	2793	4	FSM	ENSG00000267508.6	ENST00000544719.6	2793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.23609564462324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGAGATTTTTGGTGGT	36	False	NA	-8	True	AATAAA	-17	NA	44401576	44385648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44388103_44392339_44392467_44397198_44397257_44401422
transcript_49747.known	chr19	-	1023	6	FSM	ENSG00000167384.11	ENST00000586637.5	1023	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	23.7267781209333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGTAAACAGTCATCAG	-6	True	NA	NA	False	CATAAA	-35	NA	44500522	44477789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44485035_44485158_44497283_44497378_44500274
transcript_49748.known	chr19	-	837	5	FSM	ENSG00000167384.11	ENST00000591064.1	837	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.5093066677858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCATAAGAAACCATTTTC	-6	True	NA	NA	False	NA	NA	NA	44500522	44477848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497373_44500274
transcript_49749.known	chr19	-	3131	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	18.2345825288105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-8	True	NA	NA	False	AGTAAA	-20	NA	44500524	44475638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
transcript_4975.nic	chr1	-	1246	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-157	25185	95	466	5prime_fragment	FALSE	canonical	3	83	junction_2	55.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCGAAAAATGGATGTA	658	False	NA	NA	False	GATAAA	-38	NA	91021630	90940482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_49755.known	chr19	-	3049	4	FSM	ENSG00000167384.11	ENST00000391956.8	3049	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.1334152332916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGATTTCCTTCT	-4	True	NA	NA	False	AGTAAA	-22	NA	44500520	44475636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_44478147_44479282_44479410_44497283_44497373_44500197
transcript_49756.known	chr19	+	1576	11	FSM	ENSG00000142273.13	ENST00000647358.2	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	14.9786514746822	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGGCCAGCAGGG	-3	True	NA	27	True	AATAAA	-38	NA	44777889	44800652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_49757.known	chr19	+	310	1	FSM	ENSG00000285128.1	ENST00000644659.1	310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGCAAATGACAGCAATCA	8089	False	NA	5	True	AATAAA	-16	NA	44803700	44804010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44803700_44804000
transcript_49759.known	chr19	+	2409	15	FSM	ENSG00000187244.12	ENST00000270233.12	2409	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	18.5922959687005	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGGCCAGAGCTTCCT	-1	True	NA	24	True	AATAAA	-24	NA	44809102	44821421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44818883_44819055_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_49761.known	chr19	+	1768	9	FSM	ENSG00000130204.13	ENST00000426677.7	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	2328	junction_5	76.8602628150594	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGGCCTCCGTTTTCTC	-11	True	NA	23	True	AATATA	-18	NA	44891253	44903689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_49762.nnic	chr19	+	1440	9	NNC	ENSG00000130204.13	novel	707	6	NA	NA	445	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	778.296286368501	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGCCTCCGTTTTCT	392	False	NA	22	True	AATATA	-17	NA	44891698	44903688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_44891808_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_49765.known	chr19	+	689	5	FSM	ENSG00000130208.10	ENST00000588750.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	860.592637372642	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCTCCTGAGTGCT	4894	False	NA	36	True	AATAAA	-11	NA	44914246	44919342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914490_44914671_44914734_44914871_44914950_44916189_44916326_44919172
transcript_49766.known	chr19	+	553	4	FSM	ENSG00000130208.10	ENST00000588802.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	961.733157724463	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	0	True	NA	40	True	AATAAA	-15	NA	44914324	44919346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914490_44914871_44914950_44916189_44916326_44919172
transcript_49771.known	chr19	+	1166	4	FSM	ENSG00000130203.10	ENST00000252486.9	1166	4	0	0	0	0	multi-exon	FALSE	canonical	3	11010	junction_1	452.619290598868	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	1	True	NA	33	True	AATAAA	-21	NA	44905795	44909393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44905842_44906601_44906668_44907759_44907953_44908532
transcript_49772.known	chr19	+	737	4	FSM	ENSG00000130203.10	ENST00000446996.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	5583.6938988053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGCCAGCCGCTACAGGA	-4	True	NA	NA	False	NA	NA	NA	44905790	44908944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44905842_44906586_44906668_44907759_44907953_44908532
transcript_49773.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_1	218.088666983561	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	6	True	NA	40	True	AATAAA	-15	NA	44914607	44919346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
transcript_49774.known	chr19	+	273	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	806.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	2	True	NA	37	True	AATAAA	-12	NA	44914709	44919343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914734_44914871_44914950_44919172
transcript_49775.known	chr19	+	562	4	FSM	ENSG00000130208.10	ENST00000592885.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	948.780738046936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTCCTGAGTGCTTC	-5	True	NA	38	True	AATAAA	-13	NA	44914702	44919344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914734_44914871_44914950_44916189_44916471_44919172
transcript_49776.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592176.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1019.43590066053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGCTTCTTTAC	16	True	NA	43	True	AATAAA	-18	NA	44914868	44919349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44914950_44915097_44915218_44916189_44916326_44919172
transcript_49778.nnic	chr19	+	539	5	Fusion	ENSG00000130208.10_ENSG00000214855.10	novel	689	5	NA	NA	-25	-1	multi-exon	FALSE	canonical	1	2	junction_4	995.379827000728	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTGGCCAGGCATGG	76	False	NA	11	True	AATAAA	-15	NA	44914677	44931190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_+_44914734_44914871_44914950_44916189_44916326_44926955_44927034_44930999
transcript_4978.known	chr1	-	820	2	FSM	ENSG00000122482.22	ENST00000495966.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTGCAATTATATCATA	233	False	NA	NA	False	ATTAAA	-3	NA	91022055	91020447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_91021202_91021989
transcript_49783.known	chr19	+	279	3	FSM	ENSG00000214855.10	ENST00000589081.2	301	3	19	3	16	-1	multi-exon	FALSE	canonical	1	2	junction_2	11	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTGGCCAGGCATGG	17	False	NA	11	True	AATAAA	-15	NA	44926819	44931190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44926830_44926955_44927034_44930999
transcript_49784.known	chr19	+	2732	14	FSM	ENSG00000104853.16	ENST00000541297.6	2732	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.74503397322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCCGGGCCCCCCT	-2	True	NA	NA	False	NA	NA	NA	44954590	44993196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44955086_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_49785.known	chr19	+	2470	14	FSM	ENSG00000104853.16	ENST00000337392.10	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_6	51.2558266279416	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCCTCCTCCTCGT	-3	True	NA	34	True	AATAAA	-28	NA	44955379	44993341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_49786.known	chr19	+	633	6	FSM	ENSG00000104859.15	ENST00000585615.5	633	6	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_2	7.49933330370107	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCCCGTCACCTGTC	8140	False	NA	33	True	AATAAA	-12	NA	45068201	45070942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_49787.known	chr19	+	599	2	FSM	ENSG00000104859.15	ENST00000588247.5	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCACGAGTTCGAGACC	13	True	NA	NA	False	NA	NA	NA	45039073	45040747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45039109_45040183
transcript_49790.known	chr19	+	576	3	FSM	ENSG00000142252.11	ENST00000591747.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	145	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGGCACTGTATCCCA	-9	True	NA	NA	False	CATAAA	-27	NA	45079257	45090537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45079280_45079906_45080030_45090106
transcript_49792.nnic	chr19	+	1281	3	NNC	ENSG00000142252.11	novel	1653	3	NA	NA	3	49	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	157	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGACTCCTGTTTTTCTTT	5	True	NA	17	True	NA	NA	NA	45079271	45090918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_45079618_45079906_45080030_45090106
transcript_49793.known	chr19	+	848	2	FSM	ENSG00000142252.11	ENST00000591607.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	3500	False	NA	-32	True	ATTAAA	-30	NA	45079194	45090869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45079280_45090106
transcript_49794.known	chr19	+	716	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATGCTCTACCTCAC	2	True	NA	NA	False	AGTAAA	-35	NA	45079268	45090713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45079378_45090106
transcript_49795.known	chr19	-	805	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_5	167.378134772735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	3	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
transcript_49796.known	chr19	-	758	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	177.73080768398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	3	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
transcript_49797.known	chr19	-	695	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	259.259522486639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	3	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
transcript_49798.known	chr19	-	1556	8	FSM	ENSG00000104879.5	ENST00000221476.4	1556	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.57428457234194	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGCGATAGTTATTG	0	True	NA	0	True	AATAAA	-17	NA	45322875	45306412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45306929_45307460_45307651_45308408_45308533_45311748_45311921_45315464_45315598_45317824_45317980_45319520_45319732_45322820
transcript_4980.nic	chr1	-	662	2	ISM	ENSG00000162669.16	ENST00000427444.1	672	4	11	14866	8	-6307	5prime_fragment	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGCCTATTTGGCTTG	-4	True	NA	NA	False	AAAAAG	-1	NA	91404829	91400479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_91401110_91404797
transcript_49801.known	chr19	-	4108	23	FSM	ENSG00000104884.17	ENST00000391945.10	4108	23	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_22	17.778713244442	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	0	True	NA	-67	True	AATAAA	-16	NA	45370573	45349836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_49803.nic	chr19	-	1443	13	NIC	ENSG00000104884.17	novel	1538	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	46.723403010578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTTGTGTTGGAATA	-19	True	NA	NA	False	AATAAA	-44	NA	45370592	45358758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_45358913_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_49805.known	chr19	+	1782	13	FSM	ENSG00000104892.17	ENST00000391946.7	1782	13	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_5	9.34968805183717	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTCACCTGACTTCAT	3	True	NA	13	True	ATTAAA	-21	NA	45340749	45351519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45340847_45345533_45345800_45346543_45346775_45347446_45347517_45347940_45348161_45348645_45348734_45348819_45348922_45349428_45349603_45350340_45350432_45350513_45350552_45350640_45350748_45350953_45351018_45351285
transcript_49809.known	chr19	-	3379	10	FSM	ENSG00000012061.16	ENST00000300853.8	3379	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_9	88.6012011177398	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-18	True	NA	-7	True	AATAAA	-19	NA	45423917	45407333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_49810.known	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	100.162090854996	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	14	True	NA	-62	True	NA	NA	NA	45424367	45409667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_49811.nic	chr19	-	1146	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	800	-52	-1	0	3prime_fragment	FALSE	canonical	3	253	junction_1	77.8873385089001	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-40	True	NA	-10	True	AATAAA	-20	NA	45423567	45409615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49813.known	chr19	-	949	9	FSM	ENSG00000012061.16	ENST00000340192.11	949	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	127.644770750705	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	13	True	NA	-8	True	AATAAA	-22	NA	45423839	45409613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_49814.nic	chr19	-	992	9	NIC	ENSG00000012061.16	novel	1453	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_2	135.794824551601	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-27	True	NA	-10	True	AATAAA	-20	NA	45423926	45409615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_49817.nic	chr19	-	1234	9	ISM	ENSG00000012061.16	ENST00000300853.8	3379	10	-6	6102	-6	0	5prime_fragment	FALSE	canonical	3	183	junction_8	90.2108640907513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGAGCTTGCT	-24	True	NA	-1	True	AATAAA	-15	NA	45423923	45413435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_49818.nic	chr19	-	1195	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	441	3768	-9	0	5prime_fragment	FALSE	canonical	3	124	junction_8	103.520453896802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGAGCTTGCT	-27	True	NA	-1	True	AATAAA	-15	NA	45423926	45413435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_49821.nic	chr19	-	1074	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	272	2	-1	0	3prime_fragment	FALSE	canonical	3	63	junction_2	127.591343830246	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-40	True	NA	-10	True	AATAAA	-20	NA	45423567	45409615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49824.known	chr19	-	1278	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	75.338691038184	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-39	True	NA	1	True	AATAAA	-17	NA	45423566	45413433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49837.known	chr19	-	836	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	160.481276166411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGCTGGCTGCGCTG	26	True	NA	-13	True	AATAAA	-17	NA	45423501	45409618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_49839.known	chr19	+	1830	3	FSM	ENSG00000117877.11	ENST00000589804.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	90	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGGGGTTTTGGTT	21	False	NA	13	True	ATTAAA	-21	NA	45406690	45409786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45406725_45407093_45407236_45408132
transcript_49849.known	chr19	+	1061	2	FSM	ENSG00000117877.11	ENST00000592852.1	1061	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCAGCTGAAAGAACC	14	False	NA	NA	False	AAGAAA	-4	NA	45406661	45408619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45407236_45408132
transcript_49851.known	chr19	-	2063	10	FSM	ENSG00000125744.12	ENST00000344680.8	2063	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	22.5684145064143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	255	False	NA	-4	True	AATAAA	-16	NA	45497055	45485293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45496791
transcript_49852.nnic	chr19	-	1059	7	NNC	ENSG00000125744.12	novel	1127	7	NA	NA	494	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	48.402536664472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	4584	False	NA	-4	True	AATAAA	-16	NA	45492726	45485293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45492686
transcript_49853.known	chr19	+	872	5	FSM	ENSG00000213889.11	ENST00000396737.6	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.4626276242015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	-13	True	NA	54	True	ATTAAA	-45	NA	45497250	45502510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45497344_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_49857.known	chr19	+	895	5	FSM	ENSG00000213889.11	ENST00000396735.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	28.8227340826647	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	928	False	NA	54	True	ATTAAA	-45	NA	45499609	45502510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45499726_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_49862.nic	chr19	+	865	5	NIC	ENSG00000213889.11	novel	895	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	48.0910594601533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	930	False	NA	57	True	AATACA	-19	NA	45499611	45502513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_45499726_45499948_45500067_45500455_45500562_45500680_45500711_45502016
transcript_4987.nnic	chr1	+	3181	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	3	65	junction_1	82.2698643399416	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	0	True	NA	20	True	AATAAA	-22	NA	91500813	91525764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_91500878_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_49870.known	chr19	+	618	4	FSM	ENSG00000213889.11	ENST00000456399.6	618	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.2363912388207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCGAAAAAAAAAAAAAA	-2	True	NA	NA	False	AAAAAG	-11	NA	45497230	45502302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45497344_45499953_45500067_45500455_45500562_45502016
transcript_49872.known	chr19	+	1953	4	FSM	ENSG00000213889.11	ENST00000415077.1	1953	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	4.32049379893857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACCAAATGTTTTTGAA	151	False	NA	NA	False	AAAAAG	-44	NA	45498606	45502342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45500067_45500455_45500562_45500649_45500711_45502016
transcript_49879.nnic	chr19	+	694	4	NIC	ENSG00000213889.11	novel	895	5	NA	NA	86	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	45.9081208018315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	-2	True	NA	57	True	AATACA	-19	NA	45499695	45502513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_45499726_45500455_45500562_45500649_45500711_45502016
transcript_49881.nic	chr19	+	945	3	ISM	ENSG00000213889.11	ENST00000456399.6	618	4	2494	-211	115	0	3prime_fragment	FALSE	canonical	3	20	junction_2	46.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	-8	True	NA	57	True	AATACA	-19	NA	45499724	45502513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_45500067_45500455_45500562_45502016
transcript_49883.known	chr19	-	1127	7	FSM	ENSG00000125744.12	ENST00000430715.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	25.8698666405531	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	4043	False	NA	-4	True	AATAAA	-16	NA	45493267	45485293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159
transcript_49884.known	chr19	+	2242	13	FSM	ENSG00000125753.14	ENST00000245932.11	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	671	junction_6	88.183008882412	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	12	True	NA	13	True	AATAAA	-19	NA	45507478	45526983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_49886.known	chr19	-	2234	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_18	18.8863560393329	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	2	True	NA	25	True	AATAAA	-15	NA	45639397	45609399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_49888.known	chr19	-	705	4	FSM	ENSG00000125746.18	ENST00000592433.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	3.74165738677394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCAGGGAAGAGTCAGG	710	False	NA	NA	False	NA	NA	NA	45616152	45609661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801
transcript_49890.nic	chr19	+	1217	2	NIC	ENSG00000267757.4	novel	886	3	NA	NA	-22	0	intron_retention	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGCGTG	2958	False	NA	NA	False	AATAAA	-35	NA	45641471	45642840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_45642073_45642224
transcript_49891.known	chr19	+	838	2	FSM	ENSG00000267757.4	ENST00000591087.1	838	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTCTACTAAAATAAAATT	2980	False	NA	NA	False	NA	NA	NA	45641493	45642789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45641767_45642224
transcript_49892.known	chr19	-	2791	22	FSM	ENSG00000125746.18	ENST00000536630.5	2791	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	20.4251856446099	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTCAGGGTCTATG	-13	True	NA	23	True	AATAAA	-13	NA	45643727	45609401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45643578
transcript_49893.known	chr19	-	615	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	3932.58543737097	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	0	True	NA	-20	True	AATAAA	-16	NA	45691941	45687462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
transcript_49895.known	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4005.0528918688	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	1	True	NA	-19	True	AATAAA	-17	NA	45691940	45687461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
transcript_49897.known	chr19	-	702	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	3697.11151516364	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	601	False	NA	-20	True	AATAAA	-16	NA	45692316	45687462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
transcript_49899.known	chr19	-	805	3	FSM	ENSG00000125743.11	ENST00000588599.5	805	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4245.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	1146	False	NA	-20	True	AATAAA	-16	NA	45691771	45687462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45691411
transcript_499.nic	chr1	+	2285	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_1	23.9674779649424	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-24	True	NA	22	True	AATAAA	-24	NA	6579989	6589280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_6580071_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_4990.known	chr1	+	3215	12	FSM	ENSG00000097046.13	ENST00000234626.11	3215	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	36.7499929723949	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-12	True	NA	20	True	AATAAA	-22	NA	91500850	91525764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_49900.known	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	6943	junction_2	785	2355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-12	True	NA	-17	True	AATAAA	-19	NA	45691953	45687459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688567_45691886
transcript_49901.known	chr19	-	379	3	FSM	ENSG00000125743.11	ENST00000585392.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	4253.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	24	True	NA	-17	True	AATAAA	-19	NA	45691917	45687459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45687728_45688386_45688467_45691886
transcript_49902.nnic	chr19	-	415	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-23	-10086	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGAAAAAGCCAGAGT	-23	True	NA	NA	False	AAAAAG	-17	NA	45730919	45723541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_45723886_45730848
transcript_49903.known	chr19	-	2995	1	FSM	ENSG00000279407.1	ENST00000623179.1	2995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAAGCCG	NA	False	NA	NA	False	AATAAA	-24	NA	45717381	45714386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45714400_45717400
transcript_49904.known	chr19	-	1809	2	FSM	ENSG00000177045.11	ENST00000560160.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTGCCGCTGTGTCT	1486	False	NA	-111	True	NA	NA	NA	45768627	45764888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45766112_45768041
transcript_49905.known	chr19	-	4077	27	FSM	ENSG00000125755.19	ENST00000245934.12	4077	27	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_18	39.3996365585616	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGCGCGGGTGCCGTCTC	6	True	NA	32	True	AAAAAG	-13	NA	45863147	45815409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_49907.known	chr19	-	1899	12	FSM	ENSG00000125755.19	ENST00000598896.5	1899	12	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	19.7383714066061	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTTATGTCTAAAAT	66	False	NA	NA	False	NA	NA	NA	45863132	45831169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_49908.nnic	chr19	-	1563	8	NNC	ENSG00000125755.19	novel	623	7	NA	NA	0	3870	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	103.995486558263	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGGCATTCGTTATG	-12	True	NA	-1	True	ATTAAA	-20	NA	45863165	45844879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_45845647_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_49909.known	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	71.4345076898336	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	NA	False	NA	12	True	AAAAAG	-4	NA	45817133	45815467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
transcript_49911.nic	chr19	-	832	3	ISM	ENSG00000125755.19	ENST00000598364.1	995	4	403	-20	403	0	3prime_fragment	FALSE	canonical	3	382	junction_2	35.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTACTGAAAAGAAAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	45816730	45815447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_45815698_45815850_45816184_45816481
transcript_49913.known	chr19	+	1923	2	FSM	ENSG00000170608.3	ENST00000302177.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTCTCTTTTCCTTG	-1	True	NA	33	True	ATTAAA	-21	NA	45864325	45873797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_45864526_45872074
transcript_49914.known	chr19	-	680	4	FSM	ENSG00000188624.3	ENST00000341415.3	680	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTCATGCAACCTGATT	-11	True	NA	1	True	AATAAA	-25	NA	46124688	46120066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46120358_46123885_46124157_46124267_46124322_46124624
transcript_49919.nic	chr19	+	2126	14	NIC	ENSG00000124440.16	novel	2101	13	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	74	junction_13	44.5172661138184	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	46297028	46338538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
transcript_49924.known	chr19	+	2139	13	FSM	ENSG00000011485.15	ENST00000012443.9	2139	13	0	0	0	0	multi-exon	TRUE	canonical	3	798	junction_4	56.8804789790741	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAAGTGGCCTCTGCCTC	2	True	NA	NA	False	NA	NA	NA	46347086	46390975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_49929.known	chr19	+	1929	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	263.369457368124	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	23	False	NA	22	True	AATAAA	-18	NA	46347107	46390852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_4993.nnic	chr1	+	3174	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	96.4353935231611	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-5	True	NA	20	True	AATAAA	-22	NA	91500857	91525764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_91500949_91501687_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_49931.known	chr19	-	3236	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCCTGTGTGGCTCTG	7	True	NA	-5	True	AAAACA	-42	NA	46413564	46410328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46410300_46413600
transcript_49932.known	chr19	-	3684	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	8	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGTTAAGTCTCTTG	-37	True	NA	-13	True	AATAAA	-15	NA	46471563	46466502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46468578_46469732_46471115_46471336
transcript_49935.known	chr19	+	880	7	FSM	ENSG00000160014.17	ENST00000602169.2	880	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	2327.62854997671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCATGATTGCTCTTT	10	True	NA	25	True	GATAAA	-20	NA	46601346	46609303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601438_46605826_46605858_46605993_46606186_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49937.known	chr19	+	702	6	FSM	ENSG00000160014.17	ENST00000391918.6	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2011.77298918143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	NA	False	NA	27	True	GATAAA	-22	NA	46601073	46609305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601177_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49940.known	chr19	+	2184	6	FSM	ENSG00000160014.17	ENST00000291295.14	2184	6	0	0	0	0	multi-exon	FALSE	canonical	3	4576	junction_5	254.152395227745	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTCCTCTCCTCCTGT	-7	True	NA	26	True	AATAAA	-18	NA	46601329	46610782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46601438_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49942.known	chr19	+	1203	6	FSM	ENSG00000160014.17	ENST00000596362.1	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1967.7311808273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACTGACAGTGGGCAAC	16	False	NA	NA	False	NA	NA	NA	46602071	46609770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46602211_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_49946.known	chr19	-	216	2	ISM	ENSG00000167414.5	ENST00000693335.1	435	3	1517	123	1517	-61	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCGGACAGCTTACCC	4469	False	NA	NA	False	NA	NA	NA	46634685	46634075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_46634205_46634598
transcript_49947.known	chr19	-	2923	17	FSM	ENSG00000105287.13	ENST00000600194.5	2923	17	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_16	27.1632075379547	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACGGCACTCTCGAAT	-27	True	NA	-11	True	ATTAAA	-35	NA	46714324	46674319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862
transcript_49948.known	chr19	-	1682	10	FSM	ENSG00000105287.13	ENST00000597589.5	1682	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	21.4775219850262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGCCCCATGGCCTT	1	True	NA	-37	True	ATTAAA	-9	NA	46697341	46674345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156
transcript_49952.known	chr19	-	1750	8	FSM	ENSG00000105281.12	ENST00000412532.6	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	341.178150842408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTTTTTAGCAATAA	1252	False	NA	-5	True	NA	NA	NA	46787342	46774923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787238
transcript_49953.known	chr19	-	2031	7	FSM	ENSG00000105281.12	ENST00000594991.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_3	74.254068350944	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	3689	False	NA	-7	True	AATAAA	-19	NA	46784905	46774884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516
transcript_49954.known	chr19	-	1872	7	FSM	ENSG00000105281.12	ENST00000434726.6	1872	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	373.796624739532	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	-43	True	NA	-7	True	AATAAA	-19	NA	46784824	46774884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784594
transcript_49955.known	chr19	+	383	3	FSM	ENSG00000181027.11	ENST00000600681.5	383	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	14	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCTCGGCTCACTGCAA	6	True	NA	NA	False	NA	NA	NA	46746057	46748802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_46746091_46748026_46748089_46748514
transcript_4996.known	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	92.5314331224935	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-23	True	NA	20	True	AATAAA	-22	NA	91501107	91525764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_49961.known	chr19	-	898	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	810.213243535305	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-10	True	NA	-5	True	AATAAA	-28	NA	46850316	46838157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
transcript_49962.known	chr19	-	829	5	FSM	ENSG00000042753.12	ENST00000599990.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	885.091909069335	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	9142	False	NA	-5	True	AATAAA	-28	NA	46850769	46838157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850655
transcript_49963.known	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	302.386342284171	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	4	True	NA	-14	True	AATAAA	-19	NA	46850846	46838166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
transcript_49966.known	chr19	-	793	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	862.019540091754	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	9134	False	NA	17	True	NA	NA	NA	46850777	46838135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
transcript_49968.known	chr19	-	636	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	942.575549580333	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	16	True	NA	-5	True	AATAAA	-28	NA	46850834	46838157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
transcript_49970.known	chr19	-	315	4	FSM	ENSG00000042753.12	ENST00000601649.1	315	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	877.512139833721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGGCGAGCCCCACCCC	9145	False	NA	NA	False	NA	NA	NA	46850766	46838446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46838549_46838739_46838800_46845992_46846143_46850763
transcript_49972.known	chr19	-	554	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTTTGCTGGTGCG	25	True	NA	-3	True	ATTAAA	-22	NA	46850825	46845650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_46846143_46850763
transcript_49979.known	chr19	+	2673	10	FSM	ENSG00000142230.13	ENST00000660039.1	2673	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1398.49840106372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATTCTGATCCTGCA	6	True	NA	13	True	AATAAA	-9	NA	47130865	47210623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47156986_47157182_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_49982.known	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	1399.69923577077	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	-1	True	NA	23	True	AATAAA	-17	NA	47130858	47210191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
transcript_49987.nnic	chr19	+	2117	10	NNC	ENSG00000142230.13	novel	2211	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	233	junction_8	1295.49262282827	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	-39	True	NA	23	True	AATAAA	-17	NA	47130820	47210191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47205103_47205130_47209158
transcript_49990.nic	chr19	+	1976	9	NIC	ENSG00000142230.13	novel	2522	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_1	1059.41832507277	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	NA	False	NA	23	True	AATAAA	-17	NA	47130765	47210191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_47130859_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_49993.known	chr19	+	2522	9	FSM	ENSG00000142230.13	ENST00000270225.12	2522	9	0	0	0	0	multi-exon	FALSE	canonical	3	3073	junction_8	183.386502706715	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGCAGTTAGTCGGG	-25	True	NA	26	True	AATAAA	-22	NA	47130834	47210636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_49999.known	chr19	+	2106	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	1078.71740246229	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	29	True	NA	22	True	AATAAA	-16	NA	47130888	47210190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_5.known	ERCC-00017	+	1121	1	FSM	ERCC-00017A	DQ459420	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00017_+_0_1100
transcript_50.known	ERCC-00144	+	521	1	FSM	ERCC-00144A	DQ854995	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00144_+_0_500
transcript_50006.known	chr19	+	1851	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	1139.44585529232	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	35	True	NA	2	True	TTTAAA	-10	NA	47130894	47210170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
transcript_50021.known	chr19	-	900	2	FSM	ENSG00000105327.18	ENST00000598636.1	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCCCAGCCTGGGGTG	5831	False	NA	NA	False	NA	NA	NA	47227189	47221644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47221919_47226563
transcript_50022.known	chr19	+	2027	12	FSM	ENSG00000105321.14	ENST00000221922.11	2027	12	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_1	28.1407325143871	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	-19	True	NA	18	True	AATAAA	-18	NA	47256524	47271953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_50024.known	chr19	-	2021	13	FSM	ENSG00000105419.18	ENST00000558555.6	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_8	34.1258903017766	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-12	True	NA	-13	True	GATAAA	-17	NA	47419527	47403123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_50028.known	chr19	-	1636	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	24.4310464994411	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	10	True	NA	-15	True	NA	NA	NA	47484219	47475149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_50034.nnic	chr19	-	914	4	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3516	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	91.9710099252295	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	8230	False	NA	-15	True	NA	NA	NA	47480062	47475149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_47475545_47476531_47476715_47476802_47476939_47479862
transcript_50035.nnic	chr19	-	754	3	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3540	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	109	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	8254	False	NA	-15	True	NA	NA	NA	47480038	47475149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_47475545_47476531_47476715_47479862
transcript_50037.nnic	chr19	-	1609	12	NNC	ENSG00000105402.8	novel	1662	11	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	206.463492060265	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTCTCTTCCTCCTCA	-44	True	NA	-7	True	AATAAA	-17	NA	47515067	47487639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_47487802_47487855_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_50038.nic	chr19	-	1394	12	NIC	ENSG00000105402.8	novel	1662	11	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	186.646525871324	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCTCTCTTCCTCCT	7105	False	NA	-9	True	AATAAA	-15	NA	47515144	47487641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_47487891_47488234_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_50041.known	chr19	-	1662	11	FSM	ENSG00000105402.8	ENST00000263354.8	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_9	35.8023742229478	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCCTCCTCACCT	-40	True	NA	-4	True	AATAAA	-20	NA	47515063	47487636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_50046.known	chr19	-	1460	10	FSM	ENSG00000105402.8	ENST00000595227.5	1460	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	227.180517770167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGCCCAAGAAAGAAAAT	3	True	NA	-46	True	NA	NA	NA	47515020	47487678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47503422_47503503_47514842
transcript_50052.known	chr19	-	1417	9	FSM	ENSG00000105402.8	ENST00000594001.5	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_8	180.415795802363	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGCCCAAGAAAGAAAA	-35	True	NA	-47	True	NA	NA	NA	47515058	47487679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47514842
transcript_50058.known	chr19	+	1753	3	FSM	ENSG00000268061.5	ENST00000593284.5	1753	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGACAAGTTATTT	-10	True	NA	NA	False	TTTAAA	-13	NA	47484281	47496382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47484525_47493446_47493602_47495027
transcript_50061.known	chr19	+	1504	13	FSM	ENSG00000105373.19	ENST00000246802.10	1504	13	0	0	0	0	multi-exon	TRUE	canonical	3	882	junction_12	121.15035997562	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGCTCCACGTGTGG	3	True	NA	27	True	AATAAA	-18	NA	47745545	47757058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47745784_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511_47752608_47754526_47754632_47754708_47754892_47755347_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47756998
transcript_50063.known	chr19	+	881	7	NNC	ENSG00000178980.16	novel	758	6	NA	NA	-92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1477.11156766621	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGTGAGGAGTGT	31	False	NA	42	True	AATAAA	-20	NA	47778584	47784684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_47778815_47780119_47780132_47780733_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_5007.nic	chr1	+	995	7	ISM	ENSG00000097046.13	ENST00000234626.11	3215	12	-17	12462	-17	1479	5prime_fragment	FALSE	canonical	3	240	junction_1	44.748991298377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTTCTATCTCTTTTA	-29	True	NA	30	True	ATTAAA	-14	NA	91500833	91513302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057
transcript_50073.known	chr19	+	758	6	FSM	ENSG00000178980.16	ENST00000601048.6	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_4	139.999142854519	3703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	-1	True	NA	40	True	AATAAA	-18	NA	47778702	47784682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_50076.known	chr19	+	636	6	FSM	ENSG00000178980.16	ENST00000599874.5	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1247.09672439631	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCGGAATCCACACCAC	6	False	NA	NA	False	NA	NA	NA	47778682	47784457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47778815_47780724_47780750_47780863_47781001_47781107_47781183_47781289_47781389_47784289
transcript_50080.known	chr19	+	717	5	FSM	ENSG00000178980.16	ENST00000601419.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1315.61135978677	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAATAAATATTGGATG	-13	True	NA	12	True	NA	NA	NA	47778690	47784654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47778815_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_50084.known	chr19	+	2437	5	FSM	ENSG00000178980.16	ENST00000598273.5	2437	5	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_3	152.663641709478	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGCCTGTGAGGAG	195	False	NA	39	True	AATAAA	-17	NA	47778932	47784681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_50085.known	chr19	-	2496	17	FSM	ENSG00000105499.14	ENST00000354276.7	2496	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	10.8626006899821	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGTGTGTGTCTTG	1	True	NA	-1	True	AATAAA	-25	NA	48110782	48047843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48048389_48052953_48053148_48054877_48055050_48061997_48062153_48067790_48067887_48074766_48074875_48077770_48077825_48085058_48085113_48088685_48088713_48090363_48090418_48095463_48095605_48098138_48098260_48099670_48099861_48104587_48104725_48105332_48105445_48106521_48106562_48110486
transcript_50086.nic	chr19	-	1038	4	ISM	ENSG00000105499.14	ENST00000599921.6	2486	17	48648	0	5762	0	3prime_fragment	FALSE	canonical	3	29	junction_1	2.49443825784929	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	NA	False	NA	-3	True	AATAAA	-23	NA	48062169	48047845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_48048389_48052996_48053148_48054877_48055050_48061997
transcript_5009.nnic	chr1	+	1659	9	NNC	ENSG00000137948.19	novel	604	3	NA	NA	-8570	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.53722289127305	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGTTAATAACAGCAA	-5	True	NA	NA	False	AATAAA	-34	NA	91940772	91980738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_91941012_91962717_91962947_91964626_91964765_91968145_91968261_91976265_91976439_91977042_91977394_91978167_91978297_91979568_91979758_91980642
transcript_50090.nic	chr19	-	462	2	ISM	ENSG00000105499.14	ENST00000595161.5	438	5	12645	211	5739	61	internal_fragment	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTATATTTGTCTTAG	NA	False	NA	1	True	AATAAA	-22	NA	48062192	48061570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_48061838_48061997
transcript_50093.known	chr19	-	3125	28	FSM	ENSG00000105486.14	ENST00000263274.12	3125	28	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_22	62.5211075468828	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	4	True	NA	-7	True	AATAAA	-18	NA	48170344	48115444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_50095.known	chr19	-	3027	27	FSM	ENSG00000105486.14	ENST00000427526.6	3027	27	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_25	122.397813918677	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	4	True	NA	-12	True	AATAAA	-13	NA	48170344	48115449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48165549_48165624_48170240
transcript_50098.nic	chr19	-	914	9	ISM	ENSG00000105486.14	ENST00000263274.12	3125	28	-24	34365	-24	0	5prime_fragment	FALSE	canonical	3	322	junction_3	52.0120178420334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGAGGAGCCAGGGGC	-20	True	NA	NA	False	AAAAAG	-6	NA	48170368	48149809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_5010.known	chr1	+	1436	7	FSM	ENSG00000172031.7	ENST00000370383.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.73353657780945	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGTAAGTGCTTCCA	-25	True	NA	NA	False	AATATA	-21	NA	92029984	92063538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92030311_92032504_92032591_92042822_92042981_92045531_92045661_92050316_92050421_92052509_92052659_92063054
transcript_50101.known	chr19	-	5610	14	FSM	ENSG00000105483.18	ENST00000651546.1	5610	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	21.5137220556181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAGAAGTTAAATTGAT	-13	True	NA	NA	False	AATAAA	-38	NA	48255912	48208085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_50105.known	chr19	-	1903	12	FSM	ENSG00000105483.18	ENST00000521613.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	15.9077921547797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCATGTACCTATTG	NA	False	NA	NA	False	NA	NA	NA	48255946	48211565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249750_48249848_48255791
transcript_50116.known	chr19	-	579	6	FSM	ENSG00000105483.18	ENST00000521437.1	579	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37.4112282610448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAACTGTTGGTTGACAA	2	True	NA	NA	False	NA	NA	NA	48255897	48238474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48238533_48240961_48241064_48242539_48242645_48249522_48249634_48249750_48249848_48255791
transcript_50117.known	chr19	-	614	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	7.92148975887743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTGGTTTATGTACA	1	True	NA	-6	True	ATTAAA	-14	NA	48255898	48238335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_50120.known	chr19	-	500	4	FSM	ENSG00000105483.18	ENST00000519332.5	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28.003967972811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTTTATGTACATT	6	True	NA	-4	True	ATTAAA	-16	NA	48255893	48238333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48238533_48240961_48241064_48249750_48249848_48255791
transcript_50121.known	chr19	+	2499	6	FSM	ENSG00000178150.10	ENST00000595607.6	2499	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	39.3883231427793	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGTGCAGTGACTCAC	-1	True	NA	15	True	AATAAA	-18	NA	48270080	48287608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48270220_48271244_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_50129.known	chr19	-	437	3	FSM	ENSG00000268186.1	ENST00000600941.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	48271283	48262899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48263185_48270144_48270234_48271220
transcript_50130.known	chr19	+	2206	5	FSM	ENSG00000178150.10	ENST00000315849.5	2206	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	7.58287544405155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGGTGCAGTGACTC	25	True	NA	13	True	AATAAA	-16	NA	48271396	48287606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_50132.nic	chr19	+	1096	5	NIC	ENSG00000142227.11	novel	753	4	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	92.1964614288423	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	-7	True	NA	30	True	AATAAA	-14	NA	48321471	48330553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_48321978_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_50133.known	chr19	+	649	5	FSM	ENSG00000142227.11	ENST00000270221.11	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	25.7196422992234	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	-12	True	NA	30	True	AATAAA	-14	NA	48325551	48330553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48325611_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_50134.known	chr19	+	761	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.1264925525243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	18	False	NA	30	True	AATAAA	-14	NA	48325346	48330553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
transcript_50135.known	chr19	-	2263	8	FSM	ENSG00000161558.11	ENST00000293261.8	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	15.1064251771441	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-10	True	NA	-15	True	AATAAA	-19	NA	48363940	48332355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_50136.known	chr19	-	2272	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	26.560727065015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATGAGGCTACTCTT	-8	True	NA	-20	True	AATAAA	-14	NA	48364059	48332360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
transcript_50139.known	chr19	-	1960	6	FSM	ENSG00000161558.11	ENST00000377431.6	1960	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.5272058208014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	-8	True	NA	-16	True	AATAAA	-18	NA	48363938	48332356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48363290_48363532_48363897
transcript_50141.known	chr19	+	1042	5	FSM	ENSG00000105467.9	ENST00000344846.7	1042	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCAGTCCTTCTCATGT	9	True	NA	NA	False	AATAAA	-37	NA	48364366	48376377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48364538_48365735_48365936_48373516_48373755_48375612_48375753_48376084
transcript_50149.known	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	TRUE	canonical	3	902	junction_4	108.308298389366	3183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-12	True	NA	-25	True	AATAAA	-16	NA	48391551	48382574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
transcript_50153.known	chr19	-	1594	4	FSM	ENSG00000105438.9	ENST00000597017.5	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_2	68.7071078322081	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTCTTTTGCTGCTC	25	True	NA	-28	True	AATAAA	-13	NA	48390855	48382577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423
transcript_50154.known	chr19	+	4443	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	22.7407232925377	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	3	True	NA	28	True	ATTAAA	-17	NA	48469368	48482314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_50156.known	chr19	+	5361	7	FSM	ENSG00000105447.13	ENST00000253237.10	5361	7	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_5	41.5521760360794	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTCTGTTGCCCAGGC	-3	True	NA	NA	False	NA	NA	NA	48445982	48457022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48446193_48446384_48446503_48446680_48446844_48450312_48450527_48450665_48450809_48451033_48451232_48452707
transcript_50160.known	chr19	+	1546	12	FSM	ENSG00000105443.16	ENST00000391881.7	1546	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	85.5149689665813	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAATTATTTAACCACT	70	False	NA	19	True	NA	NA	NA	48469320	48479365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474954_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_50163.nnic	chr19	+	811	5	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-2024	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	3.57071421427143	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	-1	True	NA	6	True	AATAAA	-14	NA	48589076	48599423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48589196_48591608_48591736_48592721_48592817_48596738_48596920_48599134
transcript_50168.known	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	1863.44746967072	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	167	False	NA	-67	True	NA	NA	NA	48619127	48615392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
transcript_50169.known	chr19	-	559	6	FSM	ENSG00000063177.13	ENST00000552588.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1951.23403004355	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-1	True	NA	-5	True	ATTAAA	-17	NA	48619181	48615330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48619140
transcript_5017.known	chr1	-	2006	19	FSM	ENSG00000174842.17	ENST00000370360.8	2006	19	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	39.3432190966739	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCTATAATGATACA	-7	True	NA	-8	True	AATAAA	-19	NA	92298987	92246401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_50170.known	chr19	-	1645	5	FSM	ENSG00000063177.13	ENST00000552347.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_4	655.959221293519	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTGTTATTGGGG	131	False	NA	-2	True	ATTAAA	-20	NA	48619163	48615327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48617424_48617790_48617878_48619140
transcript_50171.known	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	1748.49487655336	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	4	True	NA	-10	True	ATTAAA	-12	NA	48619176	48615335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
transcript_50172.known	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_3	757.400965289999	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-3	True	NA	-5	True	ATTAAA	-17	NA	48619183	48615330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
transcript_50173.known	chr19	-	666	2	FSM	ENSG00000063177.13	ENST00000549533.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	4690	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	2869	False	NA	-5	True	ATTAAA	-17	NA	48616425	48615330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876
transcript_50174.known	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_5	620.377111118713	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	3	True	NA	-40	True	NA	NA	NA	48619177	48615365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_50175.known	chr19	-	463	6	FSM	ENSG00000063177.13	ENST00000550645.5	463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1932.44657364699	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	131	False	NA	-5	True	ATTAAA	-17	NA	48619163	48615330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48615448_48615876_48615906_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_50176.known	chr19	+	2748	7	FSM	ENSG00000063176.16	ENST00000245222.9	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	64.8650308118498	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	46	True	NA	34	True	AATAAA	-23	NA	48619505	48630405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48619544_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_50177.known	chr19	+	2136	7	FSM	ENSG00000063176.16	ENST00000600537.5	2136	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.2671799011543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACGTGATGCTGGAAGG	-8	True	NA	NA	False	NA	NA	NA	48619451	48629916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48619544_48620401_48620554_48626067_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_50178.known	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	70.6456336623542	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-2	True	NA	34	True	AATAAA	-23	NA	48619533	48630405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_50182.nic	chr19	+	2623	6	NIC	ENSG00000063176.16	novel	1542	6	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	71.8849080127394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-18	True	NA	34	True	AATAAA	-23	NA	48624365	48630405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_48624431_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_50183.nic	chr19	+	2856	6	NIC	ENSG00000063176.16	novel	3085	6	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	71.485942674067	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-3	True	NA	34	True	AATAAA	-23	NA	48624380	48630405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_48624856_48626067_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_50184.known	chr19	+	2683	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	37.2580192710241	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	68	False	NA	34	True	AATAAA	-23	NA	48624951	48630405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_50186.known	chr19	-	712	3	FSM	ENSG00000105516.11	ENST00000593500.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	41.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACGTGATAATGCAGAT	5748	False	NA	-81	True	NA	NA	NA	48634526	48630730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48631053_48633443_48633656_48634348
transcript_50188.nic	chr19	+	509	2	ISM	ENSG00000063176.16	ENST00000601712.5	1394	6	-182	8017	-23	-5541	5prime_fragment	FALSE	canonical	3	39	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAGGCCAGGCGTGGT	3122	False	NA	NA	False	TTTAAA	-14	NA	48619267	48620634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_48619544_48620401
transcript_50189.nic	chr19	+	389	2	ISM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	9771	0	-5541	5prime_fragment	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAGGCCAGGCGTGGT	-2	True	NA	NA	False	TTTAAA	-14	NA	48619533	48620634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_48619690_48620401
transcript_50195.known	chr19	-	1715	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	43.015803781866	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-12	True	NA	-17	True	ATTAAA	-21	NA	48646187	48637945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
transcript_50203.known	chr19	-	275	2	FSM	ENSG00000063180.9	ENST00000594088.1	275	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTGGTCTGATTCTA	8002	False	NA	-5	True	ATTAAA	-21	NA	48638385	48638015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48638145_48638239
transcript_50205.known	chr19	+	1593	3	FSM	ENSG00000176920.13	ENST00000391876.5	1593	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTAAATGTTTGCAG	49	False	NA	NA	False	NA	NA	NA	48696038	48705614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48696080_48702954_48704209_48705316
transcript_50206.known	chr19	+	1449	2	FSM	ENSG00000176920.13	ENST00000522966.2	1449	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATCCCAGCTACTC	-19	True	NA	NA	False	AATACA	-27	NA	48695970	48704294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48696080_48702954
transcript_50208.known	chr19	+	312	2	FSM	ENSG00000176920.13	ENST00000522283.1	312	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGCCCTACGTTAT	43	False	NA	NA	False	AATAAA	-13	NA	48696032	48696643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48696080_48696378
transcript_50210.nic	chr19	-	919	3	ISM	ENSG00000176909.12	ENST00000356751.8	1825	8	2788	1	2674	0	3prime_fragment	FALSE	canonical	3	19	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTCATGGATGTTCTT	5765	False	NA	-5	True	NA	NA	NA	48714169	48712996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_48713551_48713715_48713771_48713859
transcript_50212.known	chr19	-	3199	12	FSM	ENSG00000105538.10	ENST00000222145.9	3199	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	31.6700447668959	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-8	True	NA	-21	True	AATAAA	-20	NA	48740610	48720584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48738959_48739646_48740145_48740287_48740520
transcript_50220.known	chr19	-	2041	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_11	152.001359280569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	-1	True	NA	-4	True	AATAAA	-15	NA	48811027	48795064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
transcript_50221.nnic	chr19	-	1672	11	NNC	ENSG00000105552.15	novel	2041	12	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	120.069813025589	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	103	False	NA	-4	True	AATAAA	-15	NA	48810950	48795064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810794
transcript_50222.known	chr19	-	1579	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	103.687463080162	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTTTGCTGCAAT	8	True	NA	-13	True	NA	NA	NA	48810916	48795109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
transcript_50223.known	chr19	-	1563	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_10	94.0372798415607	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-3	True	NA	-3	True	AATAAA	-16	NA	48811029	48795063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
transcript_50232.known	chr19	-	1272	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	136.217140533047	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGGCTTCTTCAGTGA	41	False	NA	-1	True	AATAAA	-18	NA	48811012	48795061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
transcript_50237.known	chr19	-	1050	9	FSM	ENSG00000087076.9	ENST00000263278.9	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	34.9979910137711	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	15	True	NA	-8	True	CATAAA	-19	NA	48836491	48813017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_50238.nic	chr19	-	1351	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-374	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	69.9510032604455	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	NA	False	NA	-8	True	CATAAA	-19	NA	48836884	48813017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_50239.known	chr19	-	991	8	FSM	ENSG00000087076.9	ENST00000599157.5	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	92.9147074318316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGAGGAGGATATCG	-4	True	NA	-14	True	CATAAA	-13	NA	48836510	48813023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48832665_48832753_48834275_48834359_48835804_48835844_48836323
transcript_50240.nic	chr19	-	1343	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-374	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	72.4163134174862	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGAGGATATCGTTA	NA	False	NA	-11	True	CATAAA	-16	NA	48836884	48813020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_50241.nnic	chr19	-	1130	7	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-220	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	82.398759429712	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	NA	False	NA	-8	True	CATAAA	-19	NA	48836730	48813017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48834275_48834359_48835804_48835844_48836323
transcript_50255.known	chr19	+	2350	3	FSM	ENSG00000087074.8	ENST00000200453.6	2350	3	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGCAGCGTCTGTATGTG	1	True	NA	16	True	AATAAA	-16	NA	48872420	48876058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48872652_48873224_48874899_48875613
transcript_50256.nic	chr19	-	2156	6	NIC	ENSG00000104804.8	novel	1763	13	NA	NA	596	-2410	intron_retention	FALSE	canonical	2	4	junction_1	1.72046505340853	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGGCCAGCTGGTTG	4235	False	NA	NA	False	AATAAA	-27	NA	48896143	48883380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_48884047_48885447_48885561_48887949_48888262_48889509_48889632_48894997_48895163_48895365
transcript_50261.known	chr19	+	2406	13	FSM	ENSG00000104805.16	ENST00000405315.9	2406	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	80.8783379870998	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGAGGCTCAATCCT	-20	True	NA	117	True	NA	NA	NA	48900311	48923372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48900373_48900785_48900932_48904346_48904455_48905752_48905886_48911148_48911253_48913010_48913197_48913473_48913565_48918725_48918785_48919029_48919123_48919193_48919287_48921153_48921325_48921826_48921933_48922317
transcript_50268.known	chr19	+	1515	4	FSM	ENSG00000104805.16	ENST00000492367.1	1515	4	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	29.7993288515027	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCATGGCTCCATGCCT	5980	False	NA	13	True	AATACA	-12	NA	48918999	48923268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48919287_48921153_48921325_48921826_48921933_48922317
transcript_50270.known	chr19	+	1064	7	FSM	ENSG00000104808.8	ENST00000221403.7	1064	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	5.52016505389306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGTGGTTTGGCAGAA	2	True	NA	10	True	AATAAA	-21	NA	48933698	48944969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48933812_48934999_48935112_48936031_48936196_48939448_48939702_48942439_48942565_48944356_48944508_48944823
transcript_50272.known	chr19	+	715	5	FSM	ENSG00000104808.8	ENST00000520557.1	715	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.87386354243376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	61	False	NA	9	True	AATAAA	-20	NA	48933757	48944968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48933812_48934999_48935112_48939448_48939702_48944356_48944508_48944823
transcript_50273.nic	chr19	+	869	3	ISM	ENSG00000104808.8	ENST00000520557.1	715	5	-131	4948	-72	-4939	5prime_fragment	FALSE	canonical	3	10	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGAAGTTGTCTCAGT	NA	False	NA	2	True	AATAAA	-14	NA	48933626	48940020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_48933812_48934999_48935112_48939448
transcript_50275.known	chr19	+	677	7	FSM	ENSG00000087088.21	ENST00000356483.8	677	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	859.785179888299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCAGCTGCCTTGGAC	46	False	NA	NA	False	NA	NA	NA	48954928	48961636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960238_48960337_48960809_48960915_48961531
transcript_50280.nic	chr19	+	737	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	971.678630000681	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-3	True	NA	17	True	AATAAA	-17	NA	48954879	48961798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48954963_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_50284.nnic	chr19	+	834	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	183	junction_5	750.88257404204	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	2	True	NA	17	True	AATAAA	-17	NA	48954884	48961798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961482
transcript_50285.known	chr19	+	795	6	FSM	ENSG00000087088.21	ENST00000345358.12	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	170.653332812459	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-8	True	NA	17	True	AATAAA	-17	NA	48954874	48961798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_50288.known	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	161.82706819318	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	46	False	NA	17	True	AATAAA	-17	NA	48954928	48961798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
transcript_50290.known	chr19	+	433	5	FSM	ENSG00000087088.21	ENST00000354470.7	433	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	811.297109572073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCTGCCTTGGACT	46	False	NA	NA	False	NA	NA	NA	48954928	48961637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955600_48956197_48956334_48960809_48960915_48961531
transcript_50293.known	chr19	+	775	5	FSM	ENSG00000087088.21	ENST00000513545.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	187.904230926289	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCATTTTTCTTACTTT	14	True	NA	-68	True	CATAAA	-39	NA	48954896	48961713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48955547_48955834_48956197_48956334_48960809_48960915_48961531
transcript_50299.known	chr19	+	383	4	FSM	ENSG00000087088.21	ENST00000506183.5	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	923.674305273359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCTTGGACTGT	46	False	NA	NA	False	NA	NA	NA	48954928	48961639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48956197_48956334_48960809_48960915_48961531
transcript_503.known	chr1	+	2347	11	FSM	ENSG00000204859.13	ENST00000377674.9	2347	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	25.2142816673408	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-20	True	NA	22	True	AATAAA	-24	NA	6579993	6589280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_50301.known	chr19	+	458	3	FSM	ENSG00000087088.21	ENST00000539787.2	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCCGATTCATCTAC	46	False	NA	NA	False	NA	NA	NA	48954928	48961097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48954963_48956197_48956334_48960809
transcript_50303.known	chr19	+	687	6	NNC	ENSG00000087088.21	novel	677	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1002.10350762783	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCGGCATCTGAGTCA	46	False	NA	14	True	AATAAA	-14	NA	48954928	48961795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48954965_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_50307.known	chr19	+	871	4	FSM	ENSG00000087086.15	ENST00000331825.11	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	24196	junction_2	1762.03903349374	12071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGGTTTTGTGTGTGG	0	True	NA	42	True	AATAAA	-14	NA	48965308	48966879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48965610_48965769_48965917_48966280_48966407_48966582
transcript_50308.known	chr19	-	3569	16	FSM	ENSG00000104812.15	ENST00000323798.8	3569	16	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_14	22.3232813199334	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTGTGGTCAGACAT	-1	True	NA	-23	True	AATACA	-15	NA	48993309	48968129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48987193_48987386_48991301_48991484_48992994
transcript_50313.nnic	chr19	+	1659	16	NNC	ENSG00000183207.14	novel	1545	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	535.211318598136	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	1	True	NA	17	True	TATAAA	-18	NA	48993886	49015926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_48993924_48994775_48994934_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_50317.nic	chr19	+	1898	15	NIC	ENSG00000183207.14	novel	1545	15	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	430.869339539381	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	NA	False	NA	17	True	TATAAA	-18	NA	48993468	49015926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_48993903_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_50318.known	chr19	+	1563	15	FSM	ENSG00000183207.14	ENST00000596247.5	1563	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	450.23368648845	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTATGTGTGGTTG	12	True	NA	20	True	TATAAA	-21	NA	48993897	49015929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004206_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_50322.known	chr19	+	1478	15	FSM	ENSG00000183207.14	ENST00000221413.10	1478	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	451.000588261529	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	13	True	NA	17	True	TATAAA	-18	NA	48993898	49015926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009872_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_50325.known	chr19	+	1545	15	FSM	ENSG00000183207.14	ENST00000595090.6	1545	15	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_1	235.452061934883	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGAGTGCGGATTGAG	1	True	NA	12	True	NA	NA	NA	48993886	49015970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_50345.known	chr19	+	877	3	FSM	ENSG00000189052.7	ENST00000301408.7	877	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	2	True	NA	NA	False	AATAAA	-17	NA	49043847	49045311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49044225_49044576_49044745_49044979
transcript_50347.nic	chr19	-	1145	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	40	5282	40	-5282	5prime_fragment	FALSE	canonical	2	11	junction_2	10.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGGATTTGATCATTG	7821	False	NA	39	True	AATACA	-18	NA	49065036	49061074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_50349.nic	chr19	-	1092	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	40	5335	40	-5335	5prime_fragment	FALSE	canonical	2	11	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTACTGTT	7821	False	NA	-14	True	NA	NA	NA	49065036	49061127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_5035.nic	chr1	-	1903	18	NIC	ENSG00000174842.17	novel	2006	19	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_7	84.1154668578014	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	92299016	92246491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_50352.nic	chr19	-	2060	2	ISM	ENSG00000225950.8	ENST00000595857.5	813	4	191	-493	-22	-9	intron_retention	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGGATTTGATCATTG	7994	False	NA	39	True	AATACA	-18	NA	49064863	49061074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49062010_49063738
transcript_50356.known	chr19	+	746	6	FSM	ENSG00000104863.12	ENST00000221459.7	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	7.30479294709987	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	-7	True	NA	16	True	TTTAAA	-16	NA	49114369	49118460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118019_49118351
transcript_50359.known	chr19	-	742	1	FSM	ENSG00000221916.4	ENST00000408991.4	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGTGAACGTCCAGAT	-23	True	NA	-16	True	AATAAA	-35	NA	49119143	49118401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49118400_49119100
transcript_50360.known	chr19	+	799	6	FSM	ENSG00000177380.14	ENST00000602905.1	799	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	21.5833268983259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCAGCGGGAGTGCGC	178	False	NA	NA	False	NA	NA	NA	49148572	49150354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
transcript_50361.known	chr19	+	980	2	FSM	ENSG00000177380.14	ENST00000602783.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	391	False	NA	5	True	NA	NA	NA	49149957	49151021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49150152_49150235
transcript_50362.known	chr19	-	2357	6	FSM	ENSG00000130528.12	ENST00000252825.9	2357	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	2.48193472919817	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCAGACGTGGGG	5	True	NA	-10	True	AATAAA	-15	NA	49155396	49151197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49152309_49152379_49153260_49153332_49153406
transcript_50364.nic	chr19	+	576	3	NIC	ENSG00000130529.16	novel	2947	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	60.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCCGGAGGCTTGATT	-4	True	NA	8	True	AATAAA	-16	NA	49210715	49211836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49210843_49211163_49211270_49211493
transcript_50368.known	chr19	-	2191	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	189.62235862073	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	11	True	NA	-8	True	GATAAA	-17	NA	49361495	49340594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
transcript_50371.known	chr19	-	2175	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_12	180.753899604468	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	9	True	NA	-8	True	GATAAA	-17	NA	49362416	49340594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
transcript_50372.nic	chr19	-	2133	13	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_8	165.880730245157	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	11	True	NA	-8	True	GATAAA	-17	NA	49362414	49340594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_50376.nnic	chr19	-	2136	13	NNC	ENSG00000074219.14	novel	2175	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_2	205.107492143347	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	9	True	NA	-8	True	GATAAA	-17	NA	49362416	49340594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_49341438_49342437_49342591_49343269_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
transcript_50379.nnic	chr19	-	2129	12	NNC	ENSG00000074219.14	novel	2164	12	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_11	158.695144098144	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	79	False	NA	-8	True	GATAAA	-17	NA	49362346	49340594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362296
transcript_50380.known	chr19	-	2167	12	FSM	ENSG00000074219.14	ENST00000601519.5	2167	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	188.798156245375	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	18	True	NA	-8	True	GATAAA	-17	NA	49362407	49340594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362328
transcript_50381.known	chr19	-	2164	12	FSM	ENSG00000074219.14	ENST00000311227.6	2164	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_11	121.041554233411	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-32	True	NA	-8	True	GATAAA	-17	NA	49362457	49340594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_50384.known	chr19	-	1444	12	FSM	ENSG00000074219.14	ENST00000539846.5	1444	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	211.052380792107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACAGATCACTCCGGA	-16	True	NA	NA	False	GATAAA	-33	NA	49362441	49341081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49362372
transcript_50395.nnic	chr19	+	1021	5	NIC	ENSG00000104901.7	novel	524	2	NA	NA	-90	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	8.8423695919137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	1178	False	NA	6	True	AATAAA	-19	NA	49361692	49375116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49361907_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_50397.known	chr19	+	939	5	FSM	ENSG00000104901.7	ENST00000221498.7	939	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	8.44097150806707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	20	True	NA	6	True	AATAAA	-19	NA	49363876	49375116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49364009_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_50400.known	chr19	+	524	2	FSM	ENSG00000104901.7	ENST00000594268.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	1268	False	NA	6	True	AATAAA	-19	NA	49361782	49375116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49361907_49374716
transcript_50401.known	chr19	+	1259	8	FSM	ENSG00000104894.12	ENST00000323906.9	1259	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTATCCTCTGTCAGA	-34	True	NA	17	True	AATAAA	-22	NA	49335405	49340606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49335610_49335713_49335787_49336908_49337034_49337146_49337222_49337924_49338030_49338699_49338937_49339329_49339414_49340250
transcript_50402.known	chr19	+	1849	4	FSM	ENSG00000261949.7	ENST00000610896.3	1849	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	19.6015872373189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	3	True	NA	5	True	AATAAA	-16	NA	49425387	49428987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49425490_49426409_49427614_49427945_49428120_49428618
transcript_50403.nic	chr19	+	706	2	ISM	ENSG00000261949.7	ENST00000610896.3	1849	4	2395	0	2395	0	3prime_fragment	FALSE	canonical	3	51	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	1313	False	NA	5	True	AATAAA	-16	NA	49427782	49428987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_49428120_49428618
transcript_50404.known	chr19	+	3099	17	FSM	ENSG00000161618.10	ENST00000293350.9	3099	17	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_7	26.7575193870807	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTGTCAATTTCCAT	-39	True	NA	25	True	AATAAA	-18	NA	49453224	49471050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_50412.known	chr19	-	992	10	FSM	ENSG00000104872.11	ENST00000596049.5	992	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	292.334325772208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTTCTGAGATGTGGA	-3	True	NA	-78	True	NA	NA	NA	49453494	49446368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484_49451579_49453392
transcript_50416.known	chr19	+	1050	9	FSM	ENSG00000090554.13	ENST00000597551.6	1050	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.59506743650334	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	-19	True	NA	6	True	TATAAA	-17	NA	49474214	49486231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49486014
transcript_50424.known	chr19	-	998	9	FSM	ENSG00000104872.11	ENST00000601807.5	998	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	321.91591972905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGGTGCCTTCTTGAT	1890	False	NA	-110	True	NA	NA	NA	49451601	49446400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451367
transcript_50425.known	chr19	-	1197	9	FSM	ENSG00000104872.11	ENST00000262265.10	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_3	87.0972875582242	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCTGACTGGGGAT	1	True	NA	-7	True	AATAAA	-16	NA	49451814	49446297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484
transcript_50447.known	chr19	+	660	8	FSM	ENSG00000142541.18	ENST00000467825.2	660	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5902.79414985058	7943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCTGCCCTTCCTCCA	10	False	NA	28	True	AATAAA	-19	NA	49487633	49491843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490601_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_50448.known	chr19	+	1127	8	FSM	ENSG00000142541.18	ENST00000391857.9	1127	8	0	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2275.28244490253	4400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTCTTTGCACTGTG	2	True	NA	16	True	AATAAA	-16	NA	49487607	49492308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_50449.known	chr19	+	850	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2451.17540965327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	9	False	NA	46	True	AATAAA	-37	NA	49487614	49491861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_5045.known	chr1	-	572	2	FSM	ENSG00000174842.17	ENST00000487911.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGCAAGACTTTAAAGA	-7	True	NA	NA	False	NA	NA	NA	92298987	92297520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92298030_92298924
transcript_50456.known	chr19	+	573	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	791.396352973654	3234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	-3	True	NA	63	True	AATAAA	-38	NA	49496433	49499708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_50461.known	chr19	+	944	4	FSM	ENSG00000142534.7	ENST00000600027.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	785.981057165007	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	2213	False	NA	44	True	AATAAA	-19	NA	49496364	49499689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49497326_49497519_49498047_49499511
transcript_50462.known	chr19	+	751	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	911.842944566418	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	-6	True	NA	44	True	AATAAA	-19	NA	49496430	49499689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
transcript_50464.known	chr19	+	1133	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	921	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	2218	False	NA	44	True	AATAAA	-19	NA	49496369	49499689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49498047_49499511
transcript_50465.known	chr19	+	430	5	FSM	ENSG00000142534.7	ENST00000599561.1	430	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2780.41278410239	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	17	False	NA	44	True	AATAAA	-19	NA	49496453	49499689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49496472_49497193_49497283_49497580_49497596_49497916_49498047_49499511
transcript_50469.nic	chr19	+	2166	5	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	-28	0	intron_retention	FALSE	canonical	3	95	junction_1	44.2747106145258	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-5	True	NA	21	True	AATATA	-20	NA	49513226	49526333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49513474_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_50475.nic	chr19	+	1599	3	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	11	0	intron_retention	FALSE	canonical	3	23	junction_1	89.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	34	True	NA	21	True	AATATA	-20	NA	49513265	49526333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49513474_49524506_49525574_49526009
transcript_50479.known	chr19	+	1469	7	FSM	ENSG00000142552.8	ENST00000270645.8	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	12.4632793972266	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	-9	True	NA	14	True	AATAAA	-15	NA	49528002	49543633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
transcript_50492.known	chr19	-	1000	9	FSM	ENSG00000142546.14	ENST00000339093.7	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	184.001188854855	1096	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-3	True	NA	-4	True	AATAAA	-18	NA	49580558	49555710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557080_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
transcript_5050.known	chr1	+	16899	13	FSM	ENSG00000122484.9	ENST00000610020.2	16899	13	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_8	8.86315720020555	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCCAATTCTATTTTC	11	True	NA	3	True	AATAAA	-16	NA	92299058	92402056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444_92324376_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_50501.known	chr19	+	1538	7	FSM	ENSG00000126460.11	ENST00000597121.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.07769755210323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	22	False	NA	4	True	AAAAAG	-40	NA	49581347	49591004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49581482_49583206_49583305_49583374_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_50502.known	chr19	+	1403	7	FSM	ENSG00000126460.11	ENST00000246794.10	1403	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	1.63299316185545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	-10	True	NA	4	True	AAAAAG	-40	NA	49581315	49591004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49581482_49583206_49583305_49583541_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_50510.known	chr19	+	4222	11	FSM	ENSG00000126461.15	ENST00000360565.8	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	38.8582037670297	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGCCCCATGGTTCT	-6	True	NA	15	True	ATTAAA	-18	NA	49642208	49658642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49642243_49645020_49645135_49645353_49645412_49646107_49646203_49646525_49646627_49646714_49646831_49650867_49653706_49654348_49654432_49654651_49654871_49657760_49657890_49658207
transcript_50513.known	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	186.356581612252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-7	True	NA	-65	True	NA	NA	NA	49665842	49659631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
transcript_50514.nic	chr19	-	1550	8	NIC	ENSG00000126456.16	novel	1468	8	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_7	187.268115115135	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	NA	False	NA	-5	True	AATAAA	-17	NA	49665868	49659571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665634
transcript_50521.known	chr19	-	1741	8	FSM	ENSG00000126456.16	ENST00000597198.5	1741	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	148.452699812542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGTGCGTGTCTGGT	-22	True	NA	-6	True	AATAAA	-16	NA	49665857	49659572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665483
transcript_50523.known	chr19	-	1595	8	FSM	ENSG00000126456.16	ENST00000377139.8	1595	8	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	91.2355104515064	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-22	True	NA	-5	True	AATAAA	-17	NA	49665857	49659571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_50524.nic	chr19	-	1554	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	139.736486696516	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-22	True	NA	-5	True	AATAAA	-17	NA	49665857	49659571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665671
transcript_50533.known	chr19	-	1556	8	FSM	ENSG00000126456.16	ENST00000601291.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	149.753811576309	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-22	True	NA	-5	True	AATAAA	-17	NA	49665802	49659571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660845_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_50536.known	chr19	-	1494	8	FSM	ENSG00000126456.16	ENST00000593922.5	1494	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	181.969945937481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664442_49664674_49665630
transcript_50537.known	chr19	-	1442	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	151.343703756273	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGCGTGTCTGGTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	49665875	49659569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_50540.known	chr19	-	1055	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	171.413162336567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_50543.nic	chr19	+	809	6	NIC	ENSG00000126453.10	novel	1431	7	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_5	401.760127439247	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	NA	False	NA	16	True	AATAAA	-39	NA	49665914	49673916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49673697
transcript_50546.known	chr19	+	893	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	350.397146107099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	-33	True	NA	16	True	AATAAA	-39	NA	49665960	49673916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_50547.known	chr19	-	1117	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	169.085303914917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	104	False	NA	-12	True	AATAAA	-10	NA	49665731	49659578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
transcript_50554.known	chr19	+	633	5	FSM	ENSG00000126453.10	ENST00000600947.5	633	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	445.535071571251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	5	True	NA	16	True	AATAAA	-39	NA	49665998	49673916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49673697
transcript_50556.known	chr19	+	620	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	508.219686749736	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	-33	True	NA	16	True	AATAAA	-39	NA	49665960	49673916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
transcript_50558.known	chr19	-	710	5	FSM	ENSG00000126456.16	ENST00000596765.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	225.413508911955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49665630
transcript_50561.known	chr19	+	1259	3	FSM	ENSG00000126453.10	ENST00000611631.4	1259	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	NA	False	NA	15	True	AATAAA	-38	NA	49665141	49673915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49666068_49666684_49666800_49673697
transcript_50562.known	chr19	-	2874	7	FSM	ENSG00000126456.16	ENST00000597636.5	2874	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	161.01311195745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-22	True	NA	-8	True	AATAAA	-14	NA	49665857	49659574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712_49660829_49661449_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
transcript_50563.known	chr19	-	550	2	FSM	ENSG00000126456.16	ENST00000596644.5	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	4832	False	NA	-8	True	AATAAA	-14	NA	49661003	49659574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49659834_49660712
transcript_50606.known	chr19	+	1328	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	1729.67530189917	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	4	True	NA	28	True	AATAAA	-13	NA	49677270	49688447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_50619.known	chr19	+	1393	10	FSM	ENSG00000126457.22	ENST00000391851.8	1393	10	0	0	0	0	multi-exon	FALSE	canonical	3	4181	junction_1	275.844964508045	7387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	84	False	NA	28	True	AATAAA	-13	NA	49677151	49688447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_5063.nic	chr1	+	455	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-51	97717	-51	-19745	5prime_fragment	FALSE	canonical	3	76	junction_3	3.63145976158349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAAGGTGAGTTTAA	21	False	NA	NA	False	AATAAA	-15	NA	92299007	92304339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_5064.nic	chr1	+	1564	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-51	96608	-51	-18636	5prime_fragment	FALSE	canonical	3	76	junction_3	3.63145976158349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAATATGGGAAGATA	21	False	NA	NA	False	NA	NA	NA	92299007	92305448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_50640.known	chr19	+	1192	8	FSM	ENSG00000126457.22	ENST00000610806.4	1192	8	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	1672.2673231275	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTCCTGGGGGC	84	False	NA	31	True	AATAAA	-16	NA	49677151	49688450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49686092_49686244_49686604_49686727_49688161
transcript_50642.known	chr19	+	915	7	FSM	ENSG00000126457.22	ENST00000534676.5	915	7	0	0	0	0	multi-exon	FALSE	canonical	3	4181	junction_1	321.072897572429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGCTGCTGTGTGAGAA	12	False	NA	NA	False	TTTAAA	-9	NA	49677248	49685215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921
transcript_50649.known	chr19	+	1686	11	FSM	ENSG00000126457.22	ENST00000532489.5	1686	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1856.29609976426	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	9903	False	NA	28	True	AATAAA	-13	NA	49675896	49688447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49676261_49676345_49676440_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_50651.known	chr19	+	2846	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	57.4336181919175	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-9	True	NA	11	True	AATAAA	-16	NA	49691115	49713731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_50653.known	chr19	+	2783	19	FSM	ENSG00000169169.15	ENST00000323446.9	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	57.3137617326818	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-15	True	NA	11	True	AATAAA	-16	NA	49691109	49713731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_50654.known	chr19	+	1027	4	FSM	ENSG00000169169.15	ENST00000600944.5	1027	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	68.2104586311122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTAGGGAGGCTGAGGCA	23	False	NA	NA	False	AATACA	-42	NA	49691147	49697935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325
transcript_50659.nic	chr19	+	2023	2	NIC	ENSG00000169169.15	novel	1027	4	NA	NA	1	130	intron_retention	FALSE	canonical	3	310	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGTGTGAGCTTTGC	-14	True	NA	NA	False	NA	NA	NA	49691110	49698065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49692394_49697325
transcript_50660.known	chr19	+	700	3	FSM	ENSG00000169169.15	ENST00000599937.5	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	6595	False	NA	11	True	AATAAA	-16	NA	49712554	49713731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49712850_49712971_49713065_49713419
transcript_50661.known	chr19	+	3357	23	FSM	ENSG00000196961.13	ENST00000354293.10	3357	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	112.688996434237	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	-12	True	NA	16	True	AATAAA	-17	NA	49767000	49807114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_50665.known	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_9	34.4158393766591	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-10	True	NA	-6	True	AATAAA	-41	NA	49813292	49806865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_50666.known	chr19	-	1524	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	69.5589677899263	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	6977	False	NA	-30	True	AATAAA	-17	NA	49813249	49806889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
transcript_50667.known	chr19	-	1632	11	FSM	ENSG00000010361.14	ENST00000377092.8	1632	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	61.9044424900184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAACAAAAATAAAAATACA	9	True	NA	-60	True	NA	NA	NA	49813273	49806919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
transcript_5067.known	chr1	-	7794	20	FSM	ENSG00000067208.16	ENST00000684568.2	7795	20	1	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_7	14.7561903062603	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTCCTTCAGCTTT	-18	True	NA	0	True	ATTAAA	-20	NA	92785107	92508695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92513971_92563641_92563738_92605306_92605403_92607580_92607728_92624175_92624335_92625793_92625935_92636201_92636337_92662718_92662866_92663419_92663453_92665938_92665993_92677157_92677219_92693801_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
transcript_50671.known	chr19	-	1483	10	FSM	ENSG00000010361.14	ENST00000525370.5	1483	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	92.5868294502751	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAGTCCCAGGCATC	7070	False	NA	-33	True	AATAAA	-14	NA	49813156	49806892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
transcript_50673.known	chr19	-	1479	10	FSM	ENSG00000010361.14	ENST00000528094.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	71.7801857181242	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	0	True	NA	-30	True	AATAAA	-17	NA	49813175	49806889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812637_49812737_49812995
transcript_50674.nnic	chr19	-	1713	10	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_8	87.8091364519914	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	6919	False	NA	-6	True	AATAAA	-41	NA	49813307	49806865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812446_49812737_49812995
transcript_50675.nnic	chr19	-	1545	10	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	68.8446094252381	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	6919	False	NA	-6	True	AATAAA	-41	NA	49813307	49806865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_50680.nic	chr19	+	1464	9	ISM	ENSG00000196961.13	ENST00000359032.9	3286	24	35112	-4	-276	0	3prime_fragment	FALSE	canonical	0	0	junction_4	223.70764263878	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	-4	True	NA	16	True	AATAAA	-17	NA	49802245	49807114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_49802600_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_50681.nnic	chr19	-	1460	9	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	96.0422270410261	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	6919	False	NA	-6	True	AATAAA	-41	NA	49813307	49806865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812614_49812737_49812995
transcript_50686.known	chr19	+	2332	18	FSM	ENSG00000104973.19	ENST00000312865.10	2332	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_7	24.3428509929233	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTCCCGTCACTG	-8	True	NA	17	True	AATAAA	-17	NA	49818288	49836979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_50691.known	chr19	-	1731	17	FSM	ENSG00000039650.12	ENST00000322344.8	1731	17	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_16	30.1080735642452	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-12	True	NA	-2	True	AATAAA	-17	NA	49867576	49861203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_50693.nic	chr19	-	1740	16	NIC	ENSG00000039650.12	novel	1731	17	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_15	64.2556007070374	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	9604	False	NA	-2	True	AATAAA	-17	NA	49867032	49861203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49866751
transcript_50694.known	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.7639090570042	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	10036	False	NA	-29	True	NA	NA	NA	49867286	49861230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
transcript_50695.known	chr19	-	1723	16	FSM	ENSG00000039650.12	ENST00000593946.5	1723	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	68.7395729466578	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-3	True	NA	-2	True	AATAAA	-17	NA	49867234	49861203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866529_49867053
transcript_507.nic	chr1	+	1220	2	ISM	ENSG00000204859.13	ENST00000435905.5	1001	3	-27	566	-4	-566	5prime_fragment	FALSE	canonical	3	33	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGACCTTAAGACAAT	-24	True	NA	NA	False	NA	NA	NA	6579989	6581679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_6580071_6580540
transcript_5070.known	chr1	-	2536	5	FSM	ENSG00000154511.12	ENST00000370310.5	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	5.04975246918104	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGATGGTTGGTC	8	True	NA	-11	True	AATAAA	-16	NA	92961462	92842166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_92844196_92847182_92847360_92850847_92850956_92876295_92876431_92961375
transcript_50707.known	chr19	+	1413	13	FSM	ENSG00000104960.15	ENST00000601638.5	1413	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	455.93447994202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCCAATAAAGCCTTTT	111	False	NA	0	True	NA	NA	NA	49850827	49860713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_50708.known	chr19	+	1480	13	FSM	ENSG00000104960.15	ENST00000601612.5	1480	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	486.949254428928	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	18	True	NA	27	True	AATAAA	-15	NA	49850734	49860740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857908_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_50711.nic	chr19	+	1391	13	NIC	ENSG00000104960.15	novel	1438	13	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	448.826517772241	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	8	False	NA	27	True	AATAAA	-15	NA	49851129	49860740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_50712.known	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	361.055474346471	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	20	True	NA	12	True	NA	NA	NA	49851019	49860725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_50715.nic	chr19	+	1434	13	NIC	ENSG00000104960.15	novel	1716	8	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	371.014627968584	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	637	False	NA	27	True	AATAAA	-15	NA	49851897	49860740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_49852068_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_50716.known	chr19	+	1742	13	FSM	ENSG00000104946.14	ENST00000599049.6	1742	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	102.48644896874	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGTGTGGTGGTTCAT	70	False	NA	NA	False	AAAAAG	-4	NA	49878186	49885534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49885171
transcript_50721.known	chr19	-	752	3	FSM	ENSG00000039650.12	ENST00000626274.2	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGTACCTGTCCAAG	0	True	NA	NA	False	AGTAAA	-25	NA	49867564	49865953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49866446_49867053_49867218_49867468
transcript_50722.known	chr19	-	645	3	FSM	ENSG00000039650.12	ENST00000595792.1	645	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	87.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGAGGCTGAAGCGGGA	3	True	NA	NA	False	NA	NA	NA	49867561	49866140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49866529_49867053_49867218_49867468
transcript_50723.known	chr19	-	619	2	FSM	ENSG00000039650.12	ENST00000629088.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGAAAAGAAAAAA	8	True	NA	NA	False	NA	NA	NA	49867258	49866031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49866446_49867053
transcript_50725.nic	chr19	-	1116	2	ISM	ENSG00000039650.12	ENST00000637897.1	190	3	-184	230	-22	-230	5prime_fragment	FALSE	canonical	3	26	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATTCGGACAA	9604	False	NA	NA	False	AAAACA	-34	NA	49867032	49865610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_49866446_49866751
transcript_50727.known	chr19	+	2007	3	FSM	ENSG00000169136.13	ENST00000423777.7	2007	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	6	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATCTTGTCTTTGA	1	True	NA	11	True	AATAAA	-19	NA	49929204	49933935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49929401_49930731_49931029_49932421
transcript_50729.known	chr19	+	722	3	FSM	ENSG00000169136.13	ENST00000596658.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACTACCAC	395	False	NA	NA	False	NA	NA	NA	49930218	49932632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49930433_49930731_49931029_49932421
transcript_50730.known	chr19	-	3361	3	FSM	ENSG00000213024.12	ENST00000352066.8	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	21	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-17	True	NA	-1	True	AATAAA	-19	NA	49929504	49906824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49927693_49927816_49929325
transcript_50732.known	chr19	-	2053	3	FSM	ENSG00000213024.12	ENST00000597029.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	29.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-22	True	NA	-2	True	NA	NA	NA	49929443	49908104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49927693_49927849_49929325
transcript_50735.known	chr19	-	562	3	FSM	ENSG00000213024.12	ENST00000599560.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATTTGCTTTGGGAGCC	2835	False	NA	NA	False	NA	NA	NA	49929763	49909858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49927693_49927816_49929349
transcript_50738.known	chr19	+	180	2	FSM	ENSG00000169136.13	ENST00000600336.1	682	2	179	323	174	-323	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGGATGGCTCGTAG	192	False	NA	NA	False	GGGGCT	-31	NA	49929395	49930906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_49929401_49930731
transcript_50740.known	chr19	-	3479	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	2854	False	NA	-1	True	AATAAA	-19	NA	49929744	49906824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49909885_49929325
transcript_50743.known	chr19	-	1923	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	41.9129321039583	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	14	True	NA	-7	True	AATAAA	-14	NA	50025372	49976467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_50744.known	chr19	-	2126	15	FSM	ENSG00000105053.11	ENST00000599538.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_14	23.9804342014442	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAATGAAGTAA	163	False	NA	NA	False	NA	NA	NA	50025946	49976759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_50749.known	chr19	-	1749	14	FSM	ENSG00000105053.11	ENST00000377011.6	1749	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	55.4068331504636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAATAAATTGTTTTAC	14	True	NA	-31	True	NA	NA	NA	50025372	49976491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025266
transcript_50750.nic	chr19	-	1795	14	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	43.8134831048063	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-10	True	NA	-7	True	AATAAA	-14	NA	50025473	49976467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_50752.nic	chr19	-	1813	14	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	50.9023894767021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-22	True	NA	-7	True	AATAAA	-14	NA	50025408	49976467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_50758.known	chr19	-	1831	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	59.7849734929736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	782	False	NA	-14	True	AATAAA	-19	NA	50025327	49981699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_50759.nic	chr19	-	2022	13	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	48.7119509634614	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-1	True	NA	-14	True	AATAAA	-19	NA	50025597	49981699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_50763.nic	chr19	-	1872	12	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	62.4835846211422	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-1	True	NA	-14	True	AATAAA	-19	NA	50025597	49981699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_50768.known	chr19	+	4642	5	FSM	ENSG00000142528.16	ENST00000270617.8	4642	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	21.5058131676066	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTTCCTTCTCTCAG	-10	True	NA	11	True	ATTAAA	-16	NA	50026004	50048776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50026123_50030891_50031092_50039160_50039288_50041729_50041820_50044669
transcript_50769.known	chr19	+	4715	5	FSM	ENSG00000142528.16	ENST00000391821.6	4715	5	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_1	19.421315609402	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCATTGGTTCCTTCTC	28	False	NA	7	True	ATTAAA	-12	NA	50025805	50048772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50026123_50031013_50031092_50039160_50039288_50041729_50041820_50044669
transcript_5077.known	chr1	+	896	7	FSM	ENSG00000122406.14	ENST00000645300.1	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	2287.3291132284	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGGAGCGGGCTGC	-1	True	NA	-15	True	NA	NA	NA	92832012	92841835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92832118_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_50770.known	chr19	+	2833	4	FSM	ENSG00000142528.16	ENST00000445728.7	2833	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	33.7078955472189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAAAGTTTGTGCGCAT	-10	True	NA	3	True	AATAAA	-16	NA	50026004	50047167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50026123_50039160_50039288_50041729_50041820_50044669
transcript_50772.known	chr19	-	728	7	FSM	ENSG00000161652.13	ENST00000293405.8	814	7	86	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_3	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-9	True	NA	0	True	AATAAA	-26	NA	50163195	50152547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50152652_50154599_50154727_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_50773.nic	chr19	+	1880	7	ISM	ENSG00000105357.20	ENST00000595016.1	4039	10	7351	-1	7351	0	3prime_fragment	FALSE	canonical	3	73	junction_1	13.30935343617	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	NA	False	NA	19	True	AATAAA	-17	NA	50292114	50310540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_50774.nic	chr19	+	2219	6	ISM	ENSG00000105357.20	ENST00000595016.1	4039	10	7855	-1	7855	0	3prime_fragment	FALSE	canonical	3	82	junction_2	11.2889326333361	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	NA	False	NA	19	True	AATAAA	-17	NA	50292618	50310540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_50776.known	chr19	+	2416	10	FSM	ENSG00000131408.15	ENST00000253727.10	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	34.8917196303855	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTAGGCACAATTCT	-27	True	NA	NA	False	AATAAA	-18	NA	50376456	50383388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_50777.known	chr19	+	1830	10	FSM	ENSG00000131408.15	ENST00000599105.5	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	144.895194136833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTATTTAATAAAAAC	-11	True	NA	15	True	NA	NA	NA	50376472	50382950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379133_50379182_50379779_50379880_50381965_50382175_50382455
transcript_50781.known	chr19	+	1466	9	FSM	ENSG00000131408.15	ENST00000411902.6	1466	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	158.255677228338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATAAGCCCCAGTCCAGG	-25	True	NA	NA	False	NA	NA	NA	50376458	50382731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_50783.known	chr19	+	3514	27	FSM	ENSG00000062822.16	ENST00000595904.6	3514	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	164.727105331118	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	1	True	NA	24	True	AATAAA	-18	NA	50384346	50418014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408706_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_50784.known	chr19	+	3436	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	91.4059237654119	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	1	True	NA	24	True	AATAAA	-18	NA	50384346	50418014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_50787.nic	chr19	+	1595	5	ISM	ENSG00000269404.7	ENST00000595883.6	3792	6	834	2323	814	2	3prime_fragment	FALSE	canonical	3	44	junction_2	6.92820323027551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTTGTCATGTCTGA	833	False	NA	23	True	NA	NA	NA	50419771	50428991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_50791.known	chr19	+	1443	6	FSM	ENSG00000269404.7	ENST00000270632.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.4587389640711	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCATGTCT	19	False	NA	21	True	NA	NA	NA	50418957	50428989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423752_50428037
transcript_50792.known	chr19	+	3524	28	FSM	ENSG00000062822.16	ENST00000601098.6	3524	28	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	204.699297676215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	-4	True	NA	-19	True	NA	NA	NA	50384341	50417971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50384391_50395024_50395151_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_50793.known	chr19	+	3604	28	FSM	ENSG00000086967.10	ENST00000357701.6	3604	28	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	2.77011288167632	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGAGTGTCTGTCCTTC	-4	True	NA	13	True	AAAACA	-13	NA	50432891	50466321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50432973_50435160_50435251_50435775_50435863_50436011_50436161_50436616_50436735_50437472_50437522_50437658_50437719_50440879_50441077_50442180_50442314_50443493_50443619_50443710_50443817_50445879_50446053_50448224_50448391_50450828_50450936_50451279_50451310_50451863_50452004_50454019_50454180_50454264_50454370_50455107_50455297_50455509_50455645_50458586_50458755_50458917_50459007_50459110_50459307_50460039_50460180_50461541_50461702_50461899_50462037_50464345_50464533_50466194
transcript_50794.known	chr19	+	2014	8	FSM	ENSG00000161671.17	ENST00000376918.7	2014	8	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_6	35.0731015021425	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	-22	True	NA	-32	True	ATTAAA	-23	NA	50476498	50483351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_50795.known	chr19	+	9439	7	FSM	ENSG00000161671.17	ENST00000334976.11	9439	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	11.5998084275369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGATACACTGATATT	-14	True	NA	6	True	AATAAA	-16	NA	50476506	50490871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_50798.known	chr19	-	653	5	FSM	ENSG00000142530.11	ENST00000602178.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	23.6154081057262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	576	False	50476284	NA	False	AATAAA	-22	NA	50476271	50466787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50466956_50467621_50467733_50475324_50475456_50475832_50475934_50476129
transcript_508.nic	chr1	+	1280	2	ISM	ENSG00000204859.13	ENST00000377674.9	2347	11	2	7601	2	-566	5prime_fragment	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGACCTTAAGACAAT	-18	True	NA	NA	False	NA	NA	NA	6579995	6581679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_6580137_6580540
transcript_50800.known	chr19	-	1225	5	FSM	ENSG00000142530.11	ENST00000595790.5	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	9.25675429078681	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	12	True	NA	NA	False	AATAAA	-22	NA	50476746	50466787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50466956_50467621_50467830_50475324_50475456_50475832_50475934_50476129
transcript_50802.known	chr19	-	1375	5	FSM	ENSG00000142530.11	ENST00000600100.6	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	13.7658998979362	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-1	True	NA	NA	False	AATAAA	-22	NA	50476848	50466787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50466956_50467621_50467830_50475324_50475504_50475832_50475934_50476129
transcript_50803.nnic	chr19	-	759	5	NNC	ENSG00000142530.11	novel	1375	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.8607520371266	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-3	True	NA	NA	False	AATAAA	-22	NA	50476244	50466787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_50466956_50467621_50467830_50475324_50475504_50475832_50475934_50476141
transcript_50805.known	chr19	-	802	5	FSM	ENSG00000161677.12	ENST00000601423.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	12.7867118525444	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-8	True	NA	-6	True	AATAAA	-18	NA	50511162	50505997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511116
transcript_50806.known	chr19	-	733	4	FSM	ENSG00000161677.12	ENST00000595669.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	14.3372087784044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGTGTCT	4	True	NA	-10	True	AATAAA	-14	NA	50511220	50506001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50506273_50506377_50506573_50510285_50510449_50511116
transcript_50812.known	chr19	-	971	5	FSM	ENSG00000167747.16	ENST00000597493.6	1570	5	0	599	0	17	multi-exon	FALSE	canonical	3	12	junction_4	1027.86730053057	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGGATAAGTGGGC	338	False	NA	NA	False	NA	NA	NA	50804620	50798302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50804571
transcript_50817.nic	chr19	-	1389	4	FSM	ENSG00000167747.16	ENST00000596287.6	1364	4	-39	14	5	0	multi-exon	FALSE	canonical	3	92	junction_1	838.35115951889	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	324	False	NA	-25	True	CATAAA	-19	NA	50804634	50797703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798925_50799293_50799358_50802216_50802258_50804571
transcript_50819.nic	chr19	-	1486	4	FSM	ENSG00000167747.16	ENST00000693315.1	1450	4	-36	0	-6	0	multi-exon	FALSE	canonical	3	90	junction_1	839.178301806131	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	283	False	NA	-25	True	CATAAA	-19	NA	50804675	50797703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799271_50799358_50802216_50802258_50804571
transcript_50822.known	chr19	-	782	4	FSM	ENSG00000167747.16	ENST00000601267.5	782	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	975.669456777698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCCACCAGGCTCATG	400	False	NA	NA	False	NA	NA	NA	50804558	50798373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804466
transcript_50823.known	chr19	-	1718	4	FSM	ENSG00000167747.16	ENST00000641834.2	1735	4	0	17	0	0	multi-exon	FALSE	canonical	3	1159	junction_3	436.843984354445	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-2	True	NA	-25	True	CATAAA	-19	NA	50804929	50797703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804571
transcript_5083.known	chr1	+	1028	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	0	0	0	multi-exon	FALSE	canonical	3	5357	junction_6	445.802463805096	13818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTTAAGCTCTTAT	-1	True	NA	35	True	AATAAA	-18	NA	92832039	92841924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_50831.known	chr19	-	892	3	FSM	ENSG00000167747.16	ENST00000597705.6	1394	3	0	502	0	-12	multi-exon	FALSE	canonical	3	62	junction_1	548.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATACGCCACCGTGAGAC	289	False	NA	NA	False	NA	NA	NA	50804669	50798205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50798959_50802216_50802258_50804571
transcript_50832.nic	chr19	-	2086	3	NIC	ENSG00000167747.16	novel	1450	4	NA	NA	-33	0	intron_retention	FALSE	canonical	3	1159	junction_2	493	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-4	True	NA	-25	True	CATAAA	-19	NA	50804962	50797703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_50799358_50802216_50802258_50804571
transcript_50834.known	chr19	-	912	3	FSM	ENSG00000167748.11	ENST00000596300.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAAGCCTTCTGTCGCC	-11	True	NA	NA	False	GGGGCT	-19	NA	50820849	50819270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50819350_50819898_50820036_50820153
transcript_50835.known	chr19	-	1347	5	ISM	ENSG00000167749.12	ENST00000324041.6	1416	6	657	1	0	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTGTTTGTAGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	50910738	50906351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_50907087_50908358_50908496_50908578_50908830_50909251_50909415_50910677
transcript_50836.known	chr19	-	481	3	FSM	ENSG00000167749.12	ENST00000431178.2	481	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGACTGGGAACCCA	1351	False	NA	NA	False	NA	NA	NA	50909328	50906933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50907087_50908578_50908830_50909251
transcript_50837.known	chr19	-	1429	7	FSM	ENSG00000167755.15	ENST00000310157.7	1429	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.13437474581095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	-10	True	NA	0	True	AATAAA	-19	NA	50969591	50958630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540_50968592_50969489
transcript_50838.known	chr19	-	1513	6	FSM	ENSG00000167754.13	ENST00000336334.8	1513	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1.35646599662505	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-5	True	NA	-4	True	AATAAA	-14	NA	50953038	50943302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746
transcript_50839.known	chr19	-	1708	6	FSM	ENSG00000167755.15	ENST00000376851.7	1708	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	1.93907194296653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	0	True	NA	0	True	AATAAA	-19	NA	50968972	50958630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540
transcript_5084.known	chr1	+	629	6	FSM	ENSG00000122406.14	ENST00000645119.1	629	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	2515.7884330762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTAAGCTCTTA	16	False	NA	34	True	AATAAA	-17	NA	92832056	92841923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92840550_92840640_92841765
transcript_50840.known	chr19	-	1955	6	FSM	ENSG00000169035.12	ENST00000595820.6	1955	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.87054001888146	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAGAGAGGTGACCTT	-5	True	NA	NA	False	AATAAA	-28	NA	50983917	50976467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50977692_50979787_50979925_50980239_50980488_50981766_50981915_50982326_50982458_50983850
transcript_50842.known	chr19	-	1051	6	FSM	ENSG00000129455.15	ENST00000391806.6	1051	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.24499443206436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGTCTCTGTTTTGGC	-1	True	NA	0	True	AATAAA	-20	NA	51001604	50996006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51000423_51000719_51001097_51001176_51001531
transcript_50843.known	chr19	-	481	4	FSM	ENSG00000129455.15	ENST00000594669.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCAGACCCCTGTGGG	8495	False	NA	NA	False	NA	NA	NA	51001126	50996159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51001097
transcript_50844.known	chr19	-	555	4	FSM	ENSG00000129455.15	ENST00000347619.8	555	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTGTCTCTGTTTTG	7953	False	NA	-2	True	AATAAA	-18	NA	51001668	50996008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_50996215_50997750_50997885_51001097_51001176_51001531
transcript_50845.known	chr19	-	2984	6	FSM	ENSG00000129451.12	ENST00000358789.8	2984	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.9068785635488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTACTTGATAATG	-2	True	NA	NA	False	NA	NA	NA	51019709	51012738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51019042_51019140_51019626
transcript_50846.nic	chr19	-	1528	4	ISM	ENSG00000129451.12	ENST00000601467.1	1428	5	1281	-217	-246	217	3prime_fragment	FALSE	canonical	3	41	junction_1	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGGTTACCTGTTGTCG	9999	False	NA	-28	True	NA	NA	NA	51017568	51014292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109
transcript_50847.known	chr19	-	1176	6	FSM	ENSG00000167757.14	ENST00000453757.8	1176	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.894427190999916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCTACTGAGTGCTTA	-3	True	NA	-3	True	AATAAA	-15	NA	51026616	51022235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51022698_51023091_51023229_51024044_51024311_51024637_51024795_51025591_51025667_51026537
transcript_50848.known	chr19	-	1347	6	FSM	ENSG00000167757.14	ENST00000594768.5	1347	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.894427190999916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACTGAGTGCTTACTA	7302	False	NA	0	True	AATAAA	-18	NA	51027703	51022232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51022698_51023091_51023229_51024044_51024311_51024637_51024795_51025591_51025667_51027456
transcript_5085.known	chr1	+	271	2	FSM	ENSG00000122406.14	ENST00000644549.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	6864	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGTGTTAAGCTCT	1474	False	NA	32	True	AATAAA	-15	NA	92840524	92841921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_92840640_92841765
transcript_50851.known	chr19	-	1820	5	FSM	ENSG00000167759.13	ENST00000595793.6	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.64736790015417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	1	True	NA	-2	True	AATAAA	-20	NA	51065092	51055625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015
transcript_50852.known	chr19	-	615	5	FSM	ENSG00000167759.13	ENST00000595547.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.9034879005639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAGAAATGTACCGGC	723	False	NA	-23	True	NA	NA	NA	51065067	51056586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51056776_51058537_51058675_51060043_51060094_51060432_51060620_51065015
transcript_50853.known	chr19	-	737	3	FSM	ENSG00000167759.13	ENST00000596955.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGTATATAAATTCATG	676	False	NA	NA	False	TATAAA	-25	NA	51065114	51059642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51060094_51060432_51060620_51065015
transcript_50854.known	chr19	+	3347	8	FSM	ENSG00000142549.10	ENST00000270642.9	3347	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	6.86011840202455	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGGATTTTCTATC	-14	True	NA	NA	False	AATAAA	-23	NA	51311643	51330891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51311927_51322063_51322143_51323661_51323895_51325345_51325466_51326763_51326899_51327079_51327201_51327731_51327887_51328670
transcript_50859.known	chr19	-	872	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	34.3685903115039	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	-21	True	NA	-14	True	AATAAA	-19	NA	51366388	51345168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_50863.known	chr19	-	575	5	FSM	ENSG00000105379.10	ENST00000596253.1	575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	315.606558867207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACGGCCGGCGTCAAG	1	True	NA	-130	True	NA	NA	NA	51366366	51345284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51354149_51354309_51366269
transcript_50867.known	chr19	-	1335	2	FSM	ENSG00000262874.2	ENST00000574814.2	1335	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCGTGTGTGCGCGCGC	-6	True	NA	0	True	AATAAA	-19	NA	51390591	51388288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51389510_51390477
transcript_50869.known	chr19	+	6552	5	FSM	ENSG00000105497.8	ENST00000262259.7	6552	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.27760839478607	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTTATCAAGTGTGAAG	-9	True	NA	9	True	AATAAA	-20	NA	51571282	51592510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51571476_51573149_51573402_51581390_51581518_51581786_51581883_51586626
transcript_5087.known	chr1	+	4046	16	FSM	ENSG00000143033.18	ENST00000545708.5	4046	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.102321753693	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	-8	True	NA	38	True	ATTAAA	-39	NA	93079234	93139079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_50872.nic	chr19	-	2351	11	Fusion	ENSG00000198093.11_ENSG00000161551.15	novel	1865	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_6	88.5137842372588	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	4	True	NA	-9	True	AAAAAG	-41	NA	51905040	51855809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51890832_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_50874.nic	chr19	-	3318	10	Fusion	ENSG00000198093.11_ENSG00000161551.15	novel	1865	7	NA	NA	0	-3946	intron_retention	FALSE	canonical	3	27	junction_5	88.1397599494724	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAATGTCTTGTAATACA	-3	True	NA	-2	True	AATAAA	-19	NA	51905017	51859755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_-_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51890832_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_50879.nic	chr19	-	959	8	NIC	ENSG00000161551.15	novel	1865	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	23.7469654344916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	6	True	NA	-9	True	AAAAAG	-41	NA	51887976	51855809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887843
transcript_50881.known	chr19	-	1865	7	FSM	ENSG00000161551.15	ENST00000640955.1	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	16.6299595776886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	-22	True	NA	-9	True	AAAAAG	-41	NA	51887951	51855809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_50882.known	chr19	-	7308	7	FSM	ENSG00000161551.15	ENST00000301399.12	7308	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	31.1394712008195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-22	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887895
transcript_50886.known	chr19	-	8099	6	FSM	ENSG00000161551.15	ENST00000639636.2	8099	6	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	30.0971759472546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-7	True	NA	NA	False	AATAAA	-22	NA	51887936	51867047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51873530_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_50889.known	chr19	-	3192	5	FSM	ENSG00000198093.11	ENST00000354957.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	24.4987244565916	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATCTCTATTTCCTGTG	-3	True	NA	-12	True	AATAAA	-15	NA	51905017	51889234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_509.known	chr1	-	3201	16	FSM	ENSG00000007923.17	ENST00000377577.10	3201	16	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_5	89.3486554024302	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGGCGCTCTTCCGTG	-3	True	NA	-13	True	AATAAA	-16	NA	6701816	6634169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6639901_6640058_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_50902.known	chr19	-	730	3	FSM	ENSG00000198093.11	ENST00000599530.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	127.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGACAGCTGCCCTGTG	-5	True	NA	NA	False	NA	NA	NA	51905019	51896851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51896979_51899797_51900295_51904913
transcript_50903.nic	chr19	+	2349	7	NIC	ENSG00000176024.18	novel	2225	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	46.1796010761847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	-24	True	NA	5	True	AATAAA	-15	NA	51927446	51945752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_51927541_51927894_51927995_51929731_51929825_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_50909.nic	chr19	+	2265	6	NIC	ENSG00000176024.18	novel	3165	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	35.8719946476356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	NA	False	NA	5	True	AATAAA	-15	NA	51927430	51945752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_51927541_51929731_51929825_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_50911.known	chr19	+	3165	6	FSM	ENSG00000176024.18	ENST00000293471.11	3165	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	20.1851430512642	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGCCATGCTCTTAA	1	True	NA	NA	False	TATAAA	-41	NA	51927471	51946621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51927541_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_50916.known	chr19	+	542	5	FSM	ENSG00000176024.18	ENST00000600853.1	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	44.7045858945142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTGAAGAGAGTGGA	3	True	NA	NA	False	AAGAAA	-37	NA	51927473	51944165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51927541_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_50918.known	chr19	+	606	5	FSM	ENSG00000176024.18	ENST00000599683.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.6653333119993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGGCAAAATCATGATAC	-23	True	NA	NA	False	NA	NA	NA	51927447	51944246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51927541_51929731_51929897_51940208_51940336_51940616_51940710_51944118
transcript_50919.known	chr19	+	2225	6	FSM	ENSG00000176024.18	ENST00000391794.8	2225	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	46.0043476206326	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	NA	False	NA	5	True	AATAAA	-15	NA	51927434	51945752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_51927541_51927894_51927995_51929731_51929897_51940208_51940336_51940616_51940710_51944118
transcript_50922.known	chr19	-	2355	5	FSM	ENSG00000256683.7	ENST00000243644.9	2355	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	7.91754381105656	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTGTACCTTGTCCT	-15	True	NA	-1	True	ATTAAA	-18	NA	51986840	51964339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51966215_51968577_51968674_51969004_51969132_51974345_51974532_51986769
transcript_50925.known	chr19	-	4048	6	FSM	ENSG00000197619.15	ENST00000376716.9	4048	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.251415018782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTACACACAGGCTTTG	-20	True	NA	-16	True	AATAAA	-13	NA	52008230	51991344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51994838_52001812_52001909_52002154_52002282_52003696_52003901_52007292_52007331_52008140
transcript_50926.known	chr19	-	4020	6	FSM	ENSG00000197619.15	ENST00000594083.5	4020	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	6.04648658313239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTTGTGTGAGCACAA	14	True	NA	-5	True	AATAAA	-24	NA	52008196	51991333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_50930.known	chr19	-	1293	6	FSM	ENSG00000142556.19	ENST00000356322.10	1293	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	64.6250725338084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTCTCTTTTATTC	40	True	NA	-16	True	AATATA	-1	NA	52028349	52012764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52013253_52017116_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_50931.known	chr19	-	1031	6	FSM	ENSG00000142556.19	ENST00000595189.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAGAAACCCCATGC	0	True	NA	NA	False	ACTAAA	-31	NA	52028337	52017000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52017360_52017575_52017698_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_50932.known	chr19	-	4628	5	FSM	ENSG00000142556.19	ENST00000270649.11	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	18.3762754659371	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGCTTTTGCTTTTGC	10	True	NA	-5	True	AATAAA	-17	NA	52028379	52013323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_50934.known	chr19	-	3877	7	FSM	ENSG00000197608.12	ENST00000594440.6	3877	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	4.7404875511093	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCTCAGGTATTTCTG	-26	True	NA	0	True	ATTAAA	-16	NA	52095765	52064464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52067611_52076043_52076173_52076957_52077085_52084786_52084879_52088936_52089003_52093845_52093972_52095574
transcript_50942.known	chr19	-	4356	4	FSM	ENSG00000204611.7	ENST00000600228.6	4356	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTTTCTGTTTTTTT	-7	True	NA	-21	True	ATTAAA	-1	NA	52139938	52113090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52117025_52123922_52124050_52130500_52130589_52139731
transcript_50944.nic	chr19	-	3228	4	NIC	ENSG00000204611.7	novel	4356	4	NA	NA	-26	390	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	25.781130050226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCAGGTTTTTTTT	1080	False	NA	0	True	ATTAAA	-20	NA	52138851	52114399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_52117025_52123922_52124050_52130500_52130589_52138463
transcript_50947.known	chr19	-	808	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.18544972870135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTTTCATTTCCCAT	18	False	NA	1	True	AATAAA	-19	NA	52171643	52160320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
transcript_50948.nnic	chr19	-	840	4	NNC	ENSG00000196267.14	novel	4076	5	NA	NA	-22	-2247	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.3847763108502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCTTGTCTTTTTCTT	-4	True	NA	NA	False	NA	NA	NA	52171665	52162567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_52162849_52168057_52168153_52169647_52169782_52171335
transcript_50949.nic	chr19	-	761	4	NIC	ENSG00000196267.14	novel	384	3	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	17.9133717900592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTGGCTCACAGAGTG	-4	True	NA	0	True	AATAAA	-28	NA	52171665	52165183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_52165386_52168057_52168153_52169647_52169782_52171335
transcript_50951.nic	chr19	-	439	2	ISM	ENSG00000204611.7	ENST00000600282.1	556	3	-26	6594	-26	-6594	5prime_fragment	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGGAAAAGGAGT	1080	False	NA	-10	True	AAGAAA	-14	NA	52138851	52130537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_52130589_52138463
transcript_50952.nnic	chr19	-	1493	2	NNC	ENSG00000204611.7	novel	556	3	NA	NA	0	-14397	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATTTTGTATTTGT	-7	True	NA	NA	False	TTTAAA	-43	NA	52139938	52138340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_52139627_52139731
transcript_50953.known	chr19	-	4076	5	FSM	ENSG00000196267.14	ENST00000682614.1	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTCCAGCCTGGGTGAC	-2	True	NA	NA	False	NA	NA	NA	52171621	52154106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52157541_52160464_52160592_52168057_52168153_52169647_52169782_52171335
transcript_50958.known	chr19	+	5352	15	FSM	ENSG00000105568.18	ENST00000322088.11	5352	15	0	0	0	0	multi-exon	FALSE	canonical	3	2443	junction_4	177.405752500893	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCTTCCCCGCTCTCT	7	True	NA	NA	False	AATAAA	-26	NA	52190051	52229518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259_52211493_52212685_52212834_52212954_52213111_52215778_52215894_52216003_52216075_52216528_52216664_52219690_52219865_52220188_52220250_52220978_52221134_52222098_52222242_52225716_52225809_52225964
transcript_50963.known	chr19	+	688	4	FSM	ENSG00000105568.18	ENST00000468280.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	2685	junction_1	74.0915349790754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTCACTTAGGAATTGA	69	False	NA	NA	False	NA	NA	NA	52190113	52211694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259
transcript_50964.known	chr19	+	2150	6	FSM	ENSG00000167554.15	ENST00000321287.12	2150	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	7.90948797331408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTCTTTTTTTTTTG	-2	True	NA	8	True	AATAAA	-18	NA	52336244	52367122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52336507_52347706_52347832_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_50965.known	chr19	+	2921	6	FSM	ENSG00000167554.15	ENST00000403906.8	2921	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.1773780845922	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	-4	True	NA	NA	False	NA	NA	NA	52336242	52367778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_50967.known	chr19	+	4746	5	FSM	ENSG00000198464.14	ENST00000595962.6	4746	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	11.5	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACACCTTGTAAAACAT	-11	True	NA	8	True	AATAAA	-18	NA	52297168	52325922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52297224_52300393_52300485_52314152_52314280_52315833_52315963_52321578
transcript_50968.known	chr19	+	6282	4	FSM	ENSG00000196214.11	ENST00000439461.6	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	33.1762967593833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTCTTTGATTTCT	-7	True	NA	8	True	AATAAA	-22	NA	52269586	52296046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52269632_52282110_52282238_52283284_52283414_52290065
transcript_50974.known	chr19	+	554	3	FSM	ENSG00000196214.11	ENST00000593703.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGTAAAACCGTCAG	-7	True	NA	NA	False	GATAAA	-16	NA	52269586	52290445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52269632_52283284_52283414_52290065
transcript_50975.known	chr19	+	496	4	FSM	ENSG00000221923.9	ENST00000344085.9	496	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.5944690142922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGATTGAAGTTTGTTT	4	True	NA	4	True	AATAAA	-17	NA	52369938	52374717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298_52374395_52374483
transcript_50976.known	chr19	+	953	4	FSM	ENSG00000221923.9	ENST00000600321.5	953	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	13.5728487143349	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGAGACAGGTTTT	1	True	NA	NA	False	NA	NA	NA	52369935	52380075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420
transcript_50977.known	chr19	+	2258	4	FSM	ENSG00000221923.9	ENST00000422689.3	2258	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	35.3679076125361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACTTTACATTTTATGA	-12	True	NA	18	True	ATTAAA	-30	NA	52369922	52385795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52383848
transcript_50983.known	chr19	+	5230	4	FSM	ENSG00000167562.14	ENST00000391785.8	5230	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	15.2825245151302	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTAATTTATAATGTA	-2	True	NA	13	True	AATAAA	-16	NA	52570286	52587174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_52570331_52574076_52574163_52575894_52576022_52582201
transcript_50987.known	chr19	-	576	6	FSM	ENSG00000167766.20	ENST00000601140.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	33.3190636122926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTTGCTTCAGAGAA	1	True	NA	NA	False	NA	NA	NA	52638350	52614689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52616717_52616842_52617245_52617336_52618935_52619063_52635065_52635154_52638311
transcript_50989.known	chr19	-	2890	6	FSM	ENSG00000167766.20	ENST00000594682.6	2890	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	26.431799030713	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATCTGGAAAGGTTAC	8	True	NA	-21	True	AATAAA	-15	NA	52690488	52612377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_50991.known	chr19	-	509	5	FSM	ENSG00000167766.20	ENST00000597161.6	2783	5	0	2274	0	-7	multi-exon	FALSE	canonical	2	3	junction_2	31.1046620299916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCAGAAAAATGTACAT	-4	True	NA	NA	False	NA	NA	NA	52638355	52614671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52616717_52616842_52618935_52619063_52635065_52635154_52638311
transcript_50993.nic	chr19	-	615	5	ISM	ENSG00000167766.20	ENST00000596440.5	561	6	-8	124	0	-87	5prime_fragment	FALSE	canonical	3	18	junction_2	28.5569606225873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCTGGACTTTCACTG	0	True	NA	-10	True	ACTAAA	-42	NA	52690496	52618798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_50995.known	chr19	-	2726	4	FSM	ENSG00000167766.20	ENST00000536937.6	2680	4	-36	-10	-3	10	multi-exon	FALSE	canonical	3	55	junction_1	14.0554457615387	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	9802	False	NA	-10	True	AATAAA	-26	NA	52638391	52612366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52638311
transcript_50996.known	chr19	-	728	3	FSM	ENSG00000167766.20	ENST00000601237.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGTCAGGAGATCGAGA	9805	False	NA	NA	False	NA	NA	NA	52638388	52618499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52619063_52635065_52635154_52638311
transcript_50999.known	chr19	-	2599	3	FSM	ENSG00000167766.20	ENST00000301096.8	2553	3	-36	-10	-3	10	multi-exon	FALSE	canonical	3	11	junction_1	24.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	9802	False	NA	-10	True	AATAAA	-26	NA	52638391	52612366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52614798_52635065_52635154_52638311
transcript_51.known	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00145_+_0_1000
transcript_51000.known	chr19	-	577	6	FSM	ENSG00000213020.10	ENST00000640952.1	577	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	12.280065146407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTGTCAAGAAGATGAAAG	22	True	NA	NA	False	AAGAAA	-18	NA	52735011	52706709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52729905_52730006_52735000
transcript_51001.known	chr19	-	4417	5	FSM	ENSG00000213020.10	ENST00000540744.5	4417	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	13.1600721882519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTAGTCTGTTTTTCAG	-21	True	NA	-6	True	ACTAAA	-19	NA	52735054	52702812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52735000
transcript_51003.known	chr19	-	3645	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.77123616632825	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	23	False	NA	NA	False	NA	NA	NA	52786807	52764549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
transcript_51004.known	chr19	-	3829	3	FSM	ENSG00000189190.11	ENST00000338230.3	3829	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAAAATGCTTTTGTTC	6	True	NA	NA	False	ATTAAA	-7	NA	52786763	52764194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52767773_52778825_52778908_52786594
transcript_51006.known	chr19	-	4027	5	FSM	ENSG00000204604.13	ENST00000243639.8	4027	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	60.3339663871024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	NA	False	NA	-10	True	AATAAA	-18	NA	52857649	52838535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52842152_52845178_52845297_52849086_52849214_52854257_52854346_52857571
transcript_51009.known	chr19	-	4405	4	FSM	ENSG00000204604.13	ENST00000595646.6	4405	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	33.95094500403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGAACAGGGTCTAG	-1	True	NA	NA	False	AATAAA	-21	NA	52857619	52838009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52842152_52849086_52849214_52854257_52854346_52857571
transcript_51012.known	chr19	-	394	3	FSM	ENSG00000198538.11	ENST00000464469.2	394	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	26.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGACTTTCACTGTC	-1	False	NA	NA	False	ACTAAA	-44	NA	52821633	52807875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52808134_52817943_52818032_52821585
transcript_51023.known	chr19	-	4195	5	FSM	ENSG00000213793.6	ENST00000638862.2	4144	5	-53	2	-11	-2	multi-exon	FALSE	canonical	0	0	junction_4	17.1518949390439	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGTGTCTGAGAGGTT	-17	True	NA	-3	True	AATAAA	-15	NA	52923481	52904416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52908180_52915195_52915323_52917858_52917932_52918818_52918938_52923368
transcript_51025.known	chr19	-	2697	5	FSM	ENSG00000180257.14	ENST00000357666.8	2697	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.1154937259125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATTAGAGTTGATTCA	8	True	NA	-19	True	AATAAA	-29	NA	52962861	52949378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52960026_52960178_52962726
transcript_51028.known	chr19	-	599	5	FSM	ENSG00000242779.7	ENST00000599665.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	18.9126280564072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACAAGCAAGTCATCAC	4	True	NA	NA	False	AATACA	-26	NA	52993526	52970761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52990092_52990211_52993479
transcript_51030.known	chr19	-	553	4	FSM	ENSG00000180257.14	ENST00000457013.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	17.7951304200522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGGCAAGAAGTTGAA	NA	False	NA	NA	False	AAGAAA	-20	NA	52962911	52951431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962716
transcript_51031.known	chr19	-	2560	4	FSM	ENSG00000180257.14	ENST00000444460.7	2560	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	11.7284080571728	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATTGACATTAGAGTT	-12	True	NA	-25	True	AATAAA	-23	NA	52962881	52949384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962726
transcript_51032.known	chr19	-	2990	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	10.2306728354819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCATTTCATTTCT	6	True	NA	-9	True	AATATA	-17	NA	52993524	52968250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
transcript_51035.known	chr19	-	2341	2	FSM	ENSG00000213801.4	ENST00000313956.4	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	52942601	52927134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_52929415_52942540
transcript_5104.known	chr1	+	4075	15	FSM	ENSG00000143033.18	ENST00000370298.9	4075	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	161.764126595056	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	-2	True	NA	35	True	ATTAAA	-36	NA	93079282	93139076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_51041.known	chr19	-	4431	6	FSM	ENSG00000170949.18	ENST00000683776.1	4431	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	57.4233402023951	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-11	True	NA	NA	False	AATAAA	-20	NA	53103422	53066613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091721_53103264
transcript_51042.known	chr19	-	1926	6	FSM	ENSG00000170949.18	ENST00000599247.5	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	63.7965516309463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATTCTGGAGAGAA	18	True	NA	NA	False	NA	NA	NA	53103393	53068865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091636_53091721_53103264
transcript_51045.known	chr19	-	1728	4	FSM	ENSG00000170949.18	ENST00000597112.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	48.3068893177314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCACCCTGGCTGCCTG	-12	True	NA	NA	False	NA	NA	NA	53103423	53084953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53086322_53091412_53091530_53091636_53091721_53103264
transcript_51051.known	chr19	-	2469	5	FSM	ENSG00000170954.12	ENST00000597503.5	2469	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	9.48683298050514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	12	True	NA	-1	True	ATTAAA	-23	NA	53132886	53107878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132748
transcript_51052.nic	chr19	-	2394	5	NIC	ENSG00000170954.12	novel	2479	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	9.52627944162882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-20	True	NA	-1	True	ATTAAA	-23	NA	53132918	53107878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132855
transcript_51054.known	chr19	-	2812	5	FSM	ENSG00000197937.13	ENST00000601469.2	2812	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	12.031209415516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAACATGGCGAAACCC	1	True	NA	NA	False	NA	NA	NA	53159053	53140109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53142557_53148680_53148813_53149240_53149368_53153732_53153794_53159008
transcript_51058.known	chr19	-	2402	4	FSM	ENSG00000170954.12	ENST00000421033.5	2402	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGTCTCAGATTTTA	-20	True	NA	-2	True	ATTAAA	-22	NA	53132918	53107879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132748
transcript_51059.known	chr19	-	2288	4	FSM	ENSG00000170954.12	ENST00000243643.9	2288	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8.25967446224258	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-12	True	NA	-1	True	ATTAAA	-23	NA	53132910	53107878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132855
transcript_51061.known	chr19	-	582	3	FSM	ENSG00000170954.12	ENST00000595359.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAAGAAATTGCAACAAA	NA	False	NA	NA	False	AATACA	-27	NA	53133077	53109737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53122661_53122744_53132748
transcript_51062.known	chr19	-	2132	3	FSM	ENSG00000170954.12	ENST00000601493.5	2132	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	23	True	NA	-1	True	ATTAAA	-23	NA	53132875	53107878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53109909_53122661_53122744_53132855
transcript_51064.known	chr19	-	604	3	FSM	ENSG00000197937.13	ENST00000595710.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCCCTCCTCATGTA	NA	False	NA	NA	False	NA	NA	NA	53159075	53148891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53149368_53153732_53153794_53159008
transcript_51066.known	chr19	-	4158	4	FSM	ENSG00000197497.11	ENST00000396424.5	4158	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAATGAATCATTTCTT	-1	True	NA	NA	False	AATAAA	-19	NA	53193358	53162423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53166348_53175444_53175572_53182883_53182944_53193311
transcript_51068.nnic	chr19	-	873	4	NNC	ENSG00000197497.11	novel	552	3	NA	NA	-33	639	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCTGTGTAGTTCT	NA	False	NA	0	True	AATAAA	-31	NA	53193419	53178928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_53179349_53179699_53179985_53182883_53182944_53193311
transcript_51069.known	chr19	-	552	3	FSM	ENSG00000197497.11	ENST00000597544.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGGTATGCCGTCCTCC	NA	False	NA	NA	False	NA	NA	NA	53193386	53179567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53179985_53182883_53182944_53193311
transcript_51070.known	chr19	+	197	3	ISM	ENSG00000269001.3	ENST00000691047.1	2921	5	73	9360	73	-337	5prime_fragment	FALSE	canonical	1	1	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGTGGAAATGCCTG	72	False	NA	NA	False	NA	NA	NA	53197185	53204055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_53197263_53200623_53200704_53204015
transcript_51071.nic	chr19	-	808	5	NIC	ENSG00000197928.11	novel	622	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	46.3384289763906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	24	True	NA	-2	True	AATAAA	-24	NA	53254843	53238289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_51072.known	chr19	-	622	5	FSM	ENSG00000197928.11	ENST00000594517.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	54.5091735398731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	237	False	NA	-2	True	AATAAA	-24	NA	53254688	53238289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254629
transcript_51073.known	chr19	-	3512	5	FSM	ENSG00000197928.11	ENST00000598513.6	3512	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4676347351721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCGTGTGCCTTCCGTC	-6	True	NA	NA	False	AGTAAA	-27	NA	53254873	53235380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_51075.known	chr19	-	796	5	FSM	ENSG00000197928.11	ENST00000599012.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	44.8964085423322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTTTAAAGTTCAGT	7	True	NA	NA	False	NA	NA	NA	53254860	53241391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_51078.known	chr19	-	701	5	FSM	ENSG00000197928.11	ENST00000598806.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	41.4510253190437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCTGTAATACCAGCT	-12	True	NA	NA	False	AATACA	-23	NA	53254879	53242080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_51079.known	chr19	-	935	5	FSM	ENSG00000197928.11	ENST00000594681.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	47.4894725176012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-11	True	NA	NA	False	AAAAAG	-11	NA	53254831	53241923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_51081.nic	chr19	-	755	5	NIC	ENSG00000197928.11	novel	935	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	43.8463225367875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-19	True	NA	NA	False	AAAAAG	-11	NA	53254886	53241923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_51085.known	chr19	-	706	4	FSM	ENSG00000197928.11	ENST00000601413.5	706	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	40.4722126896961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACGAGTGGTGGTTC	-1	True	NA	NA	False	TTTAAA	-35	NA	53254821	53243555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254598
transcript_51087.known	chr19	-	719	4	FSM	ENSG00000197928.11	ENST00000601828.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	30.1588387633801	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTCGTAGCTGAACAAA	21	True	NA	NA	False	NA	NA	NA	53254846	53243332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254833
transcript_51088.known	chr19	-	3207	1	FSM	ENSG00000197928.11	ENST00000599328.1	3207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATGGAAAGCCTGTGG	NA	False	NA	-2	True	AATAAA	-20	NA	53241803	53238596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53238600_53241800
transcript_51089.known	chr19	+	4413	5	FSM	ENSG00000213799.13	ENST00000595091.6	4413	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	32.4220218370169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTTTCTTTCTTTTTT	-3	True	NA	27	True	AGTAAA	-17	NA	53333748	53354869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53333793_53340823_53340926_53341234_53341323_53345505_53345633_53350817
transcript_51090.known	chr19	+	6348	4	FSM	ENSG00000213799.13	ENST00000458035.3	6348	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	31.0304509939654	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGCGAGACTCTGTCT	-3	True	NA	NA	False	NA	NA	NA	53333748	53356906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53333793_53341234_53341323_53345505_53345633_53350817
transcript_51092.known	chr19	+	6133	4	FSM	ENSG00000203326.12	ENST00000474037.6	6133	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	14.8398861930347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGATGTAATTCCAT	-8	True	NA	8	True	AATAAA	-28	NA	53365704	53386590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721
transcript_51095.known	chr19	+	1868	4	FSM	ENSG00000203326.12	ENST00000475179.5	1868	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	28.9865869364129	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGTCAAATGATG	0	True	NA	-1	True	AATAAA	-19	NA	53365712	53386581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53384969
transcript_51096.known	chr19	+	590	4	FSM	ENSG00000203326.12	ENST00000593918.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	30.6412938514171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATAATTCTGAGCCTT	16	True	NA	NA	False	TTTAAA	-10	NA	53365728	53392217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53391867
transcript_51098.known	chr19	+	4572	4	FSM	ENSG00000196417.13	ENST00000396408.8	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	15.7973274814304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGATGAGTTTGATTTCT	0	True	NA	29	True	AATATA	-22	NA	53395148	53412009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53407697
transcript_51099.known	chr19	+	7588	4	FSM	ENSG00000196417.13	ENST00000594030.2	7588	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	45.18849411078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTAAATTTTATTATT	24	False	NA	23	True	AATAAA	-17	NA	53395172	53430413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061
transcript_51103.nnic	chr19	+	4199	7	Fusion	ENSG00000160336.17_ENSG00000241015.2	novel	4061	5	NA	NA	-10	-7	multi-exon	FALSE	canonical	0	0	junction_2	130.899983023511	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGATTTGGATGAGTT	-13	True	NA	13	True	AATATA	-14	NA	53431973	53458253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53451773_53451865_53454649
transcript_51105.known	chr19	+	938	6	FSM	ENSG00000160336.17	ENST00000610928.4	938	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.369204734793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	6	True	NA	12	True	AATAAA	-22	NA	53431992	53450331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_51109.known	chr19	+	1538	6	FSM	ENSG00000160336.17	ENST00000651864.1	1538	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	140.52900056572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	-3	True	NA	NA	False	AATAAA	-19	NA	53431983	53461862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53445000_53445220_53446226_53446338_53447195_53447284_53449511_53449639_53460914
transcript_51110.nic	chr19	+	860	5	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	127.128625808667	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	NA	False	NA	12	True	AATAAA	-22	NA	53431947	53450331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_51111.known	chr19	+	3983	5	FSM	ENSG00000160336.17	ENST00000684525.1	3983	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	98.7379739512615	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	-3	True	NA	21	True	AATATA	-22	NA	53431983	53458261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_51115.nnic	chr19	+	3888	4	NIC	ENSG00000160336.17	novel	3983	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	126.148941951788	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	NA	False	NA	21	True	AATATA	-22	NA	53431967	53458261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53454649
transcript_51117.known	chr19	+	6153	4	FSM	ENSG00000198346.11	ENST00000396403.9	6153	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	26.5497436689865	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAGAGTACCTTAATT	-9	True	NA	15	True	AATAAA	-18	NA	53467732	53496255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53467790_53483749_53483838_53486631_53486759_53490374
transcript_51120.known	chr19	+	2920	2	FSM	ENSG00000241015.2	ENST00000424846.3	2920	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	-3	True	NA	19	True	NA	NA	NA	53431983	53444670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53432029_53441795
transcript_51124.known	chr19	+	5042	7	FSM	ENSG00000130844.19	ENST00000253144.13	5042	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	18.8716424533979	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	-1	True	NA	14	True	AATAAA	-17	NA	53521023	53580269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53522085_53522616_53522685_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_51126.known	chr19	+	1985	7	FSM	ENSG00000130844.19	ENST00000511593.6	1985	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	85.3085901627471	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGCCCTTCTGAGTAG	608	False	NA	22	True	AATAAA	-18	NA	53521855	53578081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53522085_53522616_53522685_53555844_53555909_53563762_53563793_53569303_53569386_53571603_53571731_53576696
transcript_5113.known	chr1	+	1951	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	200.591049727472	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	26	False	NA	50	True	AAAAAG	-19	NA	93079310	93137151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_51130.known	chr19	+	574	6	FSM	ENSG00000130844.19	ENST00000514374.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	66.8921520060463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAGATGATCATCAATT	366	False	NA	NA	False	NA	NA	NA	53537684	53576859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53537756_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_51132.known	chr19	+	4065	6	FSM	ENSG00000130844.19	ENST00000449416.6	4065	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.3656058126173	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	-11	True	NA	14	True	AATAAA	-17	NA	53538144	53580269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53538297_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_51135.known	chr19	+	572	3	FSM	ENSG00000130844.19	ENST00000649816.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	71.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCCCAATTTTTAA	585	False	NA	-32	True	NA	NA	NA	53521832	53523515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53522085_53522616_53522685_53523263
transcript_51136.known	chr19	-	1228	4	FSM	ENSG00000268864.4	ENST00000600193.4	1228	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATATATTATATGTATT	NA	False	NA	NA	False	AATAAA	-26	NA	53603497	53599627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_53600435_53601264_53601373_53601996_53602164_53603351
transcript_51137.known	chr19	+	387	1	FSM	ENSG00000269564.1	ENST00000597420.1	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGTTTCTGGTCTATT	1550	False	NA	29	True	AATAAA	-13	NA	53788781	53789168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53788800_53789200
transcript_51140.nnic	chr19	+	2039	4	NNC	ENSG00000179820.16	novel	1579	3	NA	NA	213	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.808759903924	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	-6	True	NA	15	True	TATAAA	-11	NA	53866370	53876435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_53866418_53869753_53869839_53873527_53874812_53875812
transcript_51142.nnic	chr19	+	2100	4	NNC	ENSG00000179820.16	novel	3054	3	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	151.895431867526	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	1332	False	NA	15	True	TATAAA	-11	NA	53867835	53876435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_53867944_53869753_53869839_53873527_53874812_53875812
transcript_51143.nnic	chr19	+	2140	4	NNC	ENSG00000179820.16	novel	3054	3	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	151.895431867526	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTTGTGCTTTCTTA	1332	False	NA	12	True	TATAAA	-8	NA	53867835	53876432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_53867944_53869753_53869839_53873527_53874835_53875792
transcript_51145.known	chr19	+	1579	3	FSM	ENSG00000179820.16	ENST00000421337.6	1579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	149.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTCTTTTCTTTTT	-7	True	NA	NA	False	NA	NA	NA	53866152	53874756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53866418_53869753_53869839_53873527
transcript_51146.known	chr19	+	3054	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	122.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	-11	True	NA	15	True	TATAAA	-11	NA	53867882	53876435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53867944_53869753_53869839_53873527
transcript_51147.known	chr19	+	777	3	FSM	ENSG00000179820.16	ENST00000448420.5	777	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	177.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCATCAGCGACCCCAAC	-11	True	NA	NA	False	NA	NA	NA	53867882	53874094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_53867944_53869689_53869839_53873527
transcript_51149.nic	chr19	+	2379	15	ISM	ENSG00000126583.12	ENST00000682028.1	2997	19	7670	-58	-4767	0	3prime_fragment	FALSE	canonical	3	19	junction_14	10.2728093647696	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGATATTTTCTTGT	7530	False	NA	20	True	AATAAA	-21	NA	53889858	53907652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706_53906892_53906993
transcript_51157.known	chr19	+	1833	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	80.0581149862269	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	-8	True	NA	26	True	ATTAAA	-16	NA	54115753	54131713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_51161.known	chr19	+	2269	13	FSM	ENSG00000105618.14	ENST00000419967.5	2269	13	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	82.9290191803944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGAGTGATCATTTTT	9472	False	NA	32	True	ATTAAA	-22	NA	54115409	54131719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129371_54131306
transcript_51168.known	chr19	-	774	6	FSM	ENSG00000105619.14	ENST00000391757.1	774	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	69.7492652291048	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	1	True	NA	-7	True	AATAAA	-16	NA	54115288	54107019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54107170_54108025_54108208_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_51169.known	chr19	-	1180	6	FSM	ENSG00000105619.14	ENST00000391759.6	1180	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	9.49947366963033	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-11	True	NA	-7	True	AATAAA	-16	NA	54115657	54107019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_51176.known	chr19	+	338	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1568.53420605212	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	13	True	NA	22	True	AATAAA	-19	NA	54102868	54106965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
transcript_51177.known	chr19	+	379	4	FSM	ENSG00000170906.16	ENST00000303553.5	379	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	1576.50647530122	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-1	True	NA	18	True	AATAAA	-15	NA	54102884	54106961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102960_54103113_54103189_54105933_54106012_54106810
transcript_51179.known	chr19	+	445	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	1338.37401349548	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-1	True	NA	18	True	AATAAA	-15	NA	54102854	54106961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
transcript_5118.known	chr1	+	1937	14	FSM	ENSG00000143033.18	ENST00000471953.5	1937	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	216.225474034171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTGGCTTTTACT	25	False	NA	-12	True	NA	NA	NA	93079309	93137089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_51180.known	chr19	+	435	5	FSM	ENSG00000170906.16	ENST00000391762.5	435	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	1310.10724751831	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-4	True	NA	18	True	AATAAA	-15	NA	54102851	54106961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106352_54106447_54106810
transcript_51182.known	chr19	-	1381	4	FSM	ENSG00000105617.4	ENST00000222224.4	1381	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	4.54606056566195	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGGTTCTTCTTGGGT	-9	True	NA	NA	False	NA	NA	NA	54159721	54155160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54155941_54156762_54157026_54158281_54158462_54159563
transcript_51184.known	chr19	+	2818	18	FSM	ENSG00000088038.19	ENST00000221232.11	2818	18	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	41.9423727244631	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	-3	True	NA	27	True	AATAAA	-14	NA	54137761	54155681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
transcript_51185.known	chr19	-	2362	15	FSM	ENSG00000167608.12	ENST00000619895.5	2362	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	7.6080650011172	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	5	True	NA	-13	True	AATAAA	-19	NA	54173160	54160107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54165418_54165567_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172084_54173038
transcript_51192.nnic	chr19	-	1478	10	NNC	ENSG00000167608.12	novel	2362	15	NA	NA	-119	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	11.8018621673566	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	9213	False	NA	-13	True	AATAAA	-19	NA	54164835	54160107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54164731
transcript_51196.nic	chr19	-	836	3	ISM	ENSG00000167608.12	ENST00000613492.4	537	4	-31	6084	-31	-1021	5prime_fragment	FALSE	canonical	3	27	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCGCACGCCTGTA	3	True	NA	NA	False	AATACA	-14	NA	54173191	54169191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_54169661_54171869_54172084_54173038
transcript_51197.known	chr19	+	2372	3	FSM	ENSG00000170892.13	ENST00000496583.1	2372	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	23	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	2	True	NA	10	True	AATAAA	-18	NA	54190342	54193666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54191965_54192115_54192374_54193174
transcript_51198.known	chr19	+	752	6	FSM	ENSG00000170889.14	ENST00000436445.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3543.57736757644	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGGGCCAGGGTGGG	10	True	NA	-99	True	NA	NA	NA	54200870	54207522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_51207.known	chr19	+	476	5	FSM	ENSG00000170889.14	ENST00000626547.2	476	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3045.02307052016	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGAACTCACCCAGA	-3	True	NA	NA	False	NA	NA	NA	54200857	54206565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54206552
transcript_51209.known	chr19	+	713	5	FSM	ENSG00000170889.14	ENST00000302907.9	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	4611	junction_1	1388.26411392069	13885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-3	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_51210.known	chr19	+	956	5	FSM	ENSG00000170889.14	ENST00000495002.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	3562.13232313175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGTGTGGGGGTCT	18	False	NA	23	True	AATAAA	-17	NA	54200878	54207644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206725_54207397
transcript_51216.known	chr19	+	772	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	3291.45974455104	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	11	False	NA	26	True	AATAAA	-20	NA	54200871	54207647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_51219.known	chr19	+	897	4	FSM	ENSG00000170889.14	ENST00000484121.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	4611	junction_1	1373.63613166742	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTACTCAGTGTGCCCT	9521	False	NA	NA	False	NA	NA	NA	54200808	54206847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275
transcript_51220.known	chr19	+	510	4	FSM	ENSG00000170889.14	ENST00000391751.7	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	2837.48484087972	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	13	False	NA	26	True	AATAAA	-20	NA	54200873	54207647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54207397
transcript_51227.known	chr19	+	709	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	405.095050574553	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-7	True	NA	26	True	AATAAA	-20	NA	54201132	54207647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
transcript_51228.known	chr19	+	1600	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGCGCTTTACAATTG	-2	True	NA	9	True	AATAAA	-3	NA	54201159	54207630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54201282_54201486_54201610_54206275
transcript_51229.known	chr19	+	483	1	FSM	ENSG00000268496.1	ENST00000596631.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCCGTTTCTGCTGAT	3081	False	NA	11	True	AATACA	-28	NA	54434182	54434665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54434200_54434700
transcript_51230.known	chr19	+	3658	16	FSM	ENSG00000167615.17	ENST00000326764.10	3658	16	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	84.1642837946517	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	-15	True	NA	16	True	ATTAAA	-16	NA	54449198	54462016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_51231.known	chr19	-	1931	7	FSM	ENSG00000160439.16	ENST00000610356.4	1931	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	5.20949986936259	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACCCGAGTCGTAG	8075	False	NA	-14	True	AAAAAG	-4	NA	55063217	55044323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
transcript_51233.known	chr19	-	702	2	FSM	ENSG00000160439.16	ENST00000588941.1	702	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCCTGTCCACCCTCT	10	True	NA	NA	False	NA	NA	NA	55069502	55067194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55067716_55069321
transcript_51235.known	chr19	+	745	2	FSM	ENSG00000131037.15	ENST00000587715.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCGTGCTTAGCAGA	4113	False	NA	6	True	TATAAA	-1	NA	55087068	55087905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55087436_55087527
transcript_51236.known	chr19	-	830	4	FSM	ENSG00000125503.13	ENST00000590268.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	8.83176086632785	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCAAGAAGTGCAAGGAT	NA	False	NA	NA	False	NA	NA	NA	55092598	55091207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221
transcript_51240.known	chr19	-	967	14	FSM	ENSG00000105048.18	ENST00000291901.12	967	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_13	452.845598515294	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-1	True	NA	-2	True	NA	NA	NA	55149206	55132793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_51241.known	chr19	-	934	13	FSM	ENSG00000105048.18	ENST00000356783.9	934	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_12	441.241139350759	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-1	True	NA	-2	True	NA	NA	NA	55149206	55132793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_51247.known	chr19	-	1065	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_10	315.128608666367	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACCCGCTGGGTTCTCTG	2	True	NA	-43	True	AATAAA	-12	NA	55146949	55132834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
transcript_51251.known	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_9	189.967118662256	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	9	True	NA	-73	True	NA	NA	NA	55146942	55132864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
transcript_51271.known	chr19	-	669	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	101.75061424876	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGACTCCATGTCTAT	9950	False	NA	-6	True	AATAAA	-16	NA	55156725	55151770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
transcript_51273.known	chr19	-	699	4	FSM	ENSG00000129991.13	ENST00000585806.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	17.5941909605289	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	5	True	NA	-2	True	AATAAA	-20	NA	55156481	55151766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200
transcript_51276.known	chr19	-	2118	12	FSM	ENSG00000167646.14	ENST00000524407.7	2118	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	12.1383212585269	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCAAGCGTC	8462	False	55166624	-4	True	AGTAAA	-17	NA	55166613	55158664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166522
transcript_51277.known	chr19	-	1246	3	FSM	ENSG00000180089.6	ENST00000327042.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGAGGACTGTTTGGTC	4	True	NA	-3	True	GATAAA	-22	NA	55228763	55226637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55227564_55228190_55228438_55228690
transcript_51278.known	chr19	-	1768	9	FSM	ENSG00000133265.11	ENST00000255631.9	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	215.916324938621	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTATAGAGCCATTGT	7420	False	NA	-23	True	AATAAA	-14	NA	55280360	55262230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034_55280109_55280217
transcript_51282.known	chr19	-	1635	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	0	0	0	multi-exon	TRUE	canonical	3	523	junction_7	66.385700451903	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCATTGTGTCATTTA	-9	True	NA	-15	True	AATAAA	-22	NA	55280110	55262222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
transcript_51296.known	chr19	+	605	5	FSM	ENSG00000160472.5	ENST00000291934.4	605	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.38484800354236	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTCTCTTCTCTGAA	1	True	NA	NA	False	AATACA	-16	NA	55376825	55378246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55376912_55376990_55377027_55377592_55377719_55377801_55377887_55377974
transcript_51299.known	chr19	-	695	2	FSM	ENSG00000233493.4	ENST00000444469.4	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCATGTCTGTCTGGG	-10	True	NA	-2	True	GATAAA	-17	NA	55384292	55379243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55379368_55383721
transcript_513.known	chr1	-	2210	15	FSM	ENSG00000007923.17	ENST00000294401.11	2210	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	204.244151616118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTGGAAATTAGTCGT	NA	False	NA	NA	False	TATAAA	-24	NA	6701924	6635112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_51309.known	chr19	+	4209	5	FSM	ENSG00000108107.15	ENST00000344063.7	4209	5	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	945.461791930271	5585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCATTATGAAATATGC	-1	True	NA	15	True	AATAAA	-17	NA	55385931	55392085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55388242
transcript_51310.known	chr19	+	616	5	FSM	ENSG00000108107.15	ENST00000558815.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	2528.17002741113	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACATGCCTATGACTA	-1	True	NA	48	True	TATAAA	-34	NA	55385931	55391803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55391553
transcript_51316.known	chr19	+	573	4	FSM	ENSG00000108107.15	ENST00000428193.6	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	2657.39538311901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGAGCGTGGGCTCTGGC	-1	True	NA	NA	False	NA	NA	NA	55385931	55387610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387284
transcript_51317.known	chr19	+	1204	4	FSM	ENSG00000108107.15	ENST00000560583.5	1204	4	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	1069.87392819071	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTATAACTGTAAGGGA	1	True	NA	NA	False	NA	NA	NA	55385933	55388888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929
transcript_51319.known	chr19	+	1692	4	FSM	ENSG00000108107.15	ENST00000560881.5	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	1065.61573228293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCAATAAAGTCAGCT	10	False	NA	3	True	NA	NA	NA	55385942	55388343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55388049_55388242
transcript_51320.known	chr19	+	590	3	FSM	ENSG00000108107.15	ENST00000431533.6	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	1247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCACAACAGGGGAGGGG	-1	True	NA	NA	False	NA	NA	NA	55385931	55387036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569
transcript_51321.known	chr19	-	2559	4	FSM	ENSG00000108106.14	ENST00000264552.14	2559	4	0	0	0	0	multi-exon	FALSE	canonical	3	8824	junction_1	528.676334505968	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGACAGAGTTCCTCAA	-3	True	NA	-1	True	AATAAA	-18	NA	55407788	55399744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55401763_55404287_55404479_55406814_55406963_55407586
transcript_51322.known	chr19	+	852	4	FSM	ENSG00000108107.15	ENST00000559463.5	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	5886	junction_3	266.624996744283	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	28	False	NA	33	True	AATAAA	-18	NA	55385960	55388373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55386439_55386569_55386694_55387929_55388049_55388242
transcript_51323.known	chr19	+	670	5	FSM	ENSG00000108107.15	ENST00000560055.5	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	2534.61746374083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTGAGTTTTACGGCA	3	False	NA	19	True	ATTAAA	-22	NA	55385935	55403250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55402942
transcript_51325.known	chr19	-	1075	6	FSM	ENSG00000063241.8	ENST00000425675.7	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	49.4546256683841	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-10	True	NA	-9	True	AATAAA	-17	NA	55461642	55452984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55455635_55455846_55456348_55456490_55461511
transcript_51326.known	chr19	-	1122	6	FSM	ENSG00000063241.8	ENST00000085068.7	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	106.248011746103	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-13	True	NA	-13	True	AATAAA	-13	NA	55461645	55452988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55453389_55454988_55455107_55455259_55455379_55455635_55455846_55456348_55456490_55461511
transcript_51327.known	chr19	-	1566	5	FSM	ENSG00000063241.8	ENST00000438389.6	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	75.6224173112709	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	2403	False	NA	-9	True	AATAAA	-17	NA	55462343	55452984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55456348_55456490_55461511
transcript_51328.nnic	chr19	-	959	5	NIC	ENSG00000063241.8	novel	1122	6	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	114.066592392339	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	3054	False	NA	-13	True	AATAAA	-13	NA	55461692	55452988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_55453389_55454988_55455107_55455259_55455379_55456348_55456490_55461511
transcript_5133.known	chr1	+	3845	13	FSM	ENSG00000143033.18	ENST00000540243.5	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	170.289194378922	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	-8	True	NA	38	True	ATTAAA	-39	NA	93079234	93139079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_51332.nnic	chr19	+	710	3	NNC	ENSG00000090971.5	novel	1350	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	79.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	-5	True	NA	41	True	AATAAA	-13	NA	55485181	55487566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_55485259_55485660_55485781_55487053
transcript_51333.known	chr19	+	1011	2	FSM	ENSG00000090971.5	ENST00000591590.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGCCTGGGGGGCCCCT	8	True	NA	NA	False	GGGGCT	-14	NA	55485194	55486607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55485259_55485660
transcript_51334.known	chr19	+	416	3	FSM	ENSG00000090971.5	ENST00000587400.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	15	True	NA	41	True	AATAAA	-13	NA	55485233	55487566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55485259_55485660_55485719_55487233
transcript_51335.known	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	22	True	NA	18	True	AATAAA	-18	NA	55643648	55645623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55643775_55644552
transcript_51336.known	chr19	+	1100	2	FSM	ENSG00000171425.10	ENST00000588537.1	1100	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTCGAGGTTTGTTTT	183	False	NA	16	True	AATAAA	-16	NA	55643809	55645621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55643841_55644552
transcript_51340.known	chr19	+	3022	12	FSM	ENSG00000063244.13	ENST00000450554.6	3022	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	20.3624187947688	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCGGCTGTGTGTCCA	12	True	NA	32	True	ATTAAA	-22	NA	55654145	55674715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669170_55669443_55669693_55673933
transcript_51341.known	chr19	+	2146	12	FSM	ENSG00000063244.13	ENST00000308924.9	2146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.8793975019372	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	-6	True	NA	33	True	ATTAAA	-23	NA	55655034	55674716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669182_55669443_55669693_55673933
transcript_51344.known	chr19	-	1657	2	FSM	ENSG00000142409.6	ENST00000587279.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGAAAAAGCCCTA	12	True	NA	NA	False	NA	NA	NA	56121250	56101649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56103228_56121171
transcript_51347.nic	chr19	-	2044	6	NIC	ENSG00000131848.10	novel	2151	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	13.1666244725062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTGTATAACGGAAAAC	-11	True	NA	-15	True	AATAAA	-21	NA	56314866	56221311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225049_56313282_56313385_56314680
transcript_51349.known	chr19	-	2151	6	FSM	ENSG00000131848.10	ENST00000683990.1	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	14.2632394637403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	16	True	NA	-6	True	AATAAA	-30	NA	56314839	56221302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225174_56313282_56313385_56314680
transcript_51352.known	chr19	-	1542	5	FSM	ENSG00000131848.10	ENST00000587492.5	1542	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.2546291005291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGTCTGACACACAGAGG	NA	False	NA	NA	False	NA	NA	NA	56314925	56221486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56313282_56313385_56314680
transcript_51353.known	chr19	-	314	3	FSM	ENSG00000131848.10	ENST00000585670.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	62	False	NA	NA	False	AATAAA	-18	NA	56314793	56280601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56280701_56313282_56313385_56314680
transcript_51354.known	chr19	-	686	3	FSM	ENSG00000131848.10	ENST00000591078.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGTGTTCCTCTACA	-4	True	NA	NA	False	AATAAA	-7	NA	56314859	56274503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56274909_56313282_56313385_56314680
transcript_51355.known	chr19	+	3209	7	FSM	ENSG00000240225.10	ENST00000467807.5	3209	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.8824692649233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAAATAAAAATTGG	NA	False	NA	-10	True	ATTAAA	-4	NA	56368098	56379528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368224_56368865_56368937_56369278_56369338_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_51357.known	chr19	+	555	6	FSM	ENSG00000240225.10	ENST00000462524.5	555	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	59.4286126373484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGAAATCTATACTGC	-11	True	NA	NA	False	GATAAA	-24	NA	56368120	56376971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368221_56368865_56368937_56369278_56369338_56373156_56373284_56373530_56373624_56376866
transcript_51359.known	chr19	+	945	6	FSM	ENSG00000240225.10	ENST00000589844.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	62.4839179309364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAAGCCGTATGAATG	7	True	NA	NA	False	NA	NA	NA	56368138	56377366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368221_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_51360.known	chr19	+	980	6	FSM	ENSG00000240225.10	ENST00000468396.5	980	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59.8150482738249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACAAATGTAAGGAATGC	-33	True	NA	NA	False	NA	NA	NA	56368172	56377208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368461_56368865_56368937_56369278_56369338_56373156_56373284_56373530_56373624_56376866
transcript_51361.known	chr19	+	1989	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	52.5714751552589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTTCGGGTGCATT	-11	True	NA	7	True	ATTAAA	-14	NA	56368318	56378350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_51363.nic	chr19	+	1867	5	NIC	ENSG00000240225.10	novel	945	6	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	61.936963923008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGGTTTTTCTTCGGGT	-8	True	NA	2	True	ATTAAA	-9	NA	56368123	56378345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_56368221_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_51364.known	chr19	+	3393	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	23.2849200127464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	-9	True	NA	25	True	AATAGA	-20	NA	56368320	56379828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_51367.known	chr19	-	625	5	FSM	ENSG00000018869.18	ENST00000589143.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	20.9582919151347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGATTCAAGCTCATT	114	False	NA	-4	True	AATAAA	-15	NA	56393478	56375845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56376122_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_51368.known	chr19	-	733	5	FSM	ENSG00000018869.18	ENST00000587778.5	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	12.5099960031968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACTCCTTATTAAT	264	False	NA	0	True	AATAAA	-20	NA	56393328	56384872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_51371.known	chr19	-	712	5	FSM	ENSG00000018869.18	ENST00000593145.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	16.5378354085412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGGCAAAAGGAACTC	-8	True	NA	-9	True	AATAAA	-11	NA	56393538	56384881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_51373.nnic	chr19	+	1111	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	16.8281757775464	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	-46	True	NA	3	True	AATAAA	-14	NA	56393657	56399168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_56394054_56394216_56394442_56397880_56397989_56398276_56398384_56398893
transcript_51374.nic	chr19	+	1171	5	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	12.9494208364699	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	-46	True	NA	3	True	AATAAA	-14	NA	56393657	56399168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_56394054_56394216_56394442_56397880_56398049_56398276_56398384_56398893
transcript_51375.nic	chr19	+	1135	5	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	20.1168461742889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	-25	True	NA	3	True	AATAAA	-14	NA	56393678	56399168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_56394039_56394216_56394442_56397880_56398049_56398276_56398384_56398893
transcript_51380.known	chr19	+	1274	4	FSM	ENSG00000267454.6	ENST00000589888.5	1274	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.1233464566864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	14	True	NA	3	True	AATAAA	-14	NA	56393717	56399168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56394442_56397880_56398049_56398276_56398384_56398893
transcript_51381.known	chr19	-	3832	5	FSM	ENSG00000198046.13	ENST00000292069.10	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	8.97217922246318	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGTTGGGCTCTTCTGT	151	False	NA	-4	True	AATAAA	-30	NA	56477374	56439324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56477271
transcript_51385.known	chr19	+	705	3	FSM	ENSG00000166770.12	ENST00000592146.4	730	3	24	1	-3	1	multi-exon	FALSE	canonical	3	10	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTCCTTATTCTTT	-11	True	NA	27	True	AATAAA	-23	NA	56478145	56495441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478277_56494162_56494343_56495047
transcript_51386.known	chr19	+	908	3	FSM	ENSG00000166770.12	ENST00000654200.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTCTTCCTTATTCT	NA	False	NA	25	True	AATAAA	-21	NA	56477589	56495439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56477926_56494162_56494343_56495047
transcript_51387.known	chr19	+	818	3	FSM	ENSG00000166770.12	ENST00000685306.1	1083	3	260	5	3	0	multi-exon	FALSE	canonical	3	39	junction_2	35.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-23	True	NA	23	True	AATAAA	-19	NA	56478133	56495437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478382_56494162_56494343_56495047
transcript_51388.nic	chr19	+	718	3	FSM	ENSG00000166770.12	ENST00000693493.1	707	3	-11	0	-3	0	multi-exon	FALSE	canonical	3	14	junction_1	12.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-11	True	NA	23	True	AATAAA	-19	NA	56478145	56495437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478294_56494162_56494343_56495047
transcript_51389.nic	chr19	+	1960	2	FSM	ENSG00000166770.12	ENST00000691191.1	1435	2	-530	5	2	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	NA	False	NA	23	True	AATAAA	-19	NA	56477591	56495437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478277_56494162
transcript_51390.known	chr19	+	1601	2	FSM	ENSG00000166770.12	ENST00000586822.3	1619	2	0	18	0	-1	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTACTGACAAACT	NA	False	NA	5	True	AATAAA	-1	NA	56477581	56495419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56477926_56494162
transcript_51391.known	chr19	+	1503	2	FSM	ENSG00000166770.12	ENST00000654382.1	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-3	True	NA	23	True	AATAAA	-19	NA	56478153	56495437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478382_56494162
transcript_51392.known	chr19	+	1475	2	FSM	ENSG00000166770.12	ENST00000669162.2	1499	2	24	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTCTTCCTTATTCTT	24	True	NA	26	True	AATAAA	-22	NA	56478180	56495440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478378_56494162
transcript_51393.known	chr19	+	495	2	FSM	ENSG00000166770.12	ENST00000601875.2	1412	2	83	834	10	284	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAAGTACATTCACAT	83	False	NA	NA	False	AATGAA	-34	NA	56478239	56494603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56478294_56494162
transcript_51394.known	chr19	-	385	3	FSM	ENSG00000267421.6	ENST00000587920.5	385	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTGACAATACCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56538375	56536157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56536333_56537650_56537738_56538252
transcript_51395.known	chr19	-	2045	2	FSM	ENSG00000269696.3	ENST00000596587.2	2075	2	30	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCCCTCACCATGCTG	8	True	NA	NA	False	AATAAA	-24	NA	56567411	56545565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_56547272_56567072
transcript_51399.known	chr19	+	1640	6	FSM	ENSG00000197016.12	ENST00000601902.5	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	16.2603812993423	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGGTATTTCTTTACA	23	False	NA	NA	False	ATTAAA	-18	NA	56567525	56588911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56568039_56568757_56568884_56570279_56570372_56574393_56574521_56574637_56574734_56588225
transcript_51400.nnic	chr19	+	2305	3	NNC	ENSG00000197951.10	novel	5428	3	NA	NA	-30	-1056	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	49	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATGTTATTTTAAACAG	3	True	NA	9	True	AATAAA	-17	NA	56595269	56623430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_56595327_56601506_56601592_56621267
transcript_51402.known	chr19	+	5428	3	FSM	ENSG00000197951.10	ENST00000328070.10	5428	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTCAGTCAAGGTGGC	1	True	NA	NA	False	NA	NA	NA	56595299	56626481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_56595429_56601506_56601592_56621267
transcript_51404.known	chr19	+	1287	7	FSM	ENSG00000105146.14	ENST00000302804.12	1287	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.81894409826699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCATAGTTGTGTGAG	0	True	NA	9	True	AATAAA	-21	NA	57231022	57235548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57231307_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_51405.known	chr19	+	877	6	FSM	ENSG00000105146.14	ENST00000596375.1	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.23832034148352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCTTCCTGAGCCCTG	657	False	NA	NA	False	NA	NA	NA	57231727	57235403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57231788_57232032_57232225_57232541_57232686_57233459_57233609_57234883_57235059_57235246
transcript_51406.known	chr19	-	712	4	FSM	ENSG00000267871.6	ENST00000601567.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAATAAACTATAACCAT	NA	False	NA	-29	True	NA	NA	NA	57280308	57267219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57267713_57276934_57277057_57278115_57278183_57280278
transcript_51408.known	chr19	+	4423	3	FSM	ENSG00000131845.15	ENST00000282286.6	4423	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCTGAATGATATTCC	-16	True	NA	22	True	AATAAA	-23	NA	57351270	57359898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57351698_57353724_57353852_57356029
transcript_51410.known	chr19	+	2754	4	FSM	ENSG00000152433.15	ENST00000282282.4	2754	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTCTGTAGCCCTTGG	18	True	NA	NA	False	AAAACA	-22	NA	57363550	57379565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57363704_57368543_57368580_57371781_57371909_57377127
transcript_51411.known	chr19	+	4987	4	FSM	ENSG00000188785.12	ENST00000336128.12	4987	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	15.4128373622625	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGTGTTCTCTATCT	-23	True	NA	NA	False	ATTAAA	-15	NA	57389853	57402992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57390115_57394187_57394224_57397047_57397175_57398429
transcript_51414.known	chr19	+	2714	4	FSM	ENSG00000186272.13	ENST00000307658.12	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGGAAGTGTCCTGAG	-7	True	NA	32	True	AATAAA	-26	NA	57411160	57421934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57411407_57413595_57413637_57417911_57418039_57419634
transcript_51416.known	chr19	-	652	4	FSM	ENSG00000268163.1	ENST00000415705.3	652	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.9844396019247	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATCTGGTTGTCATGCCA	5	True	NA	NA	False	AAAACA	-8	NA	57477536	57455447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57455744_57456125_57456183_57476633_57476673_57477276
transcript_51418.known	chr19	-	737	3	FSM	ENSG00000197128.13	ENST00000600175.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	23	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCAGTTAGGTCACA	-10	True	NA	NA	False	NA	NA	NA	57477551	57466662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57467086_57476633_57476673_57477276
transcript_51420.known	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	18	True	NA	57	True	AATGAA	-21	NA	57363550	57365405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57363704_57364814
transcript_51422.known	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	11	True	NA	13	True	TTTAAA	-4	NA	57435346	57438457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57435668_57438101
transcript_51423.nnic	chr19	+	634	2	NIC	ENSG00000186230.7	novel	677	2	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	6	False	NA	13	True	TTTAAA	-4	NA	57435315	57438457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57435594_57438101
transcript_51424.known	chr19	+	1743	1	FSM	ENSG00000256060.3	ENST00000596755.1	1743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACATTGTAAATTACT	34	True	NA	29	True	AATAAA	-32	NA	57363566	57365309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57363600_57365300
transcript_51425.known	chr19	+	2323	5	FSM	ENSG00000105136.22	ENST00000424930.6	2323	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	18.7799760383234	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTTCCCATACACC	1	True	NA	3	True	NA	NA	NA	57487721	57494648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112_57492212_57492855
transcript_51426.nnic	chr19	+	847	5	NNC	ENSG00000105136.22	novel	2323	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	23.3130864537495	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGACTGAATTGTGTT	-3	True	NA	35	True	AATAAA	-32	NA	57487717	57494680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112_57492212_57494367
transcript_51427.known	chr19	+	3742	5	FSM	ENSG00000105136.22	ENST00000221735.12	3742	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.92678553567856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTAGCTTTTTATTGCT	-12	True	NA	NA	False	AATAAA	-25	NA	57487749	57496098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57490146_57490186_57491470_57491598_57492112_57492212_57492855
transcript_51429.known	chr19	+	3654	4	FSM	ENSG00000105136.22	ENST00000347466.10	3654	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	21.4527905462721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTAGCTTTTTATTGC	-21	True	NA	NA	False	AATAAA	-24	NA	57487740	57496097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492855
transcript_5143.nic	chr1	+	1510	12	ISM	ENSG00000143033.18	ENST00000370298.9	4075	15	-78	5346	-30	-10	5prime_fragment	FALSE	canonical	0	0	junction_3	170.874271114541	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAAAATCTGTAGG	NA	False	NA	NA	False	NA	NA	NA	93079204	93133730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702
transcript_51430.known	chr19	+	690	4	FSM	ENSG00000105136.22	ENST00000521137.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	20.9496751499609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGGAAAGCCTTTGGT	19	True	NA	NA	False	AAAAAG	-18	NA	57487780	57493176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57490146_57490186_57491470_57491598_57492855
transcript_51431.known	chr19	+	2319	4	FSM	ENSG00000105136.22	ENST00000426954.6	2319	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.2466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATTTCCAGAGACTGA	NA	False	NA	27	True	AATAAA	-24	NA	57487710	57494672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57491467_57491598_57492112_57492212_57492855
transcript_51432.known	chr19	+	2019	4	FSM	ENSG00000152439.13	ENST00000598770.5	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	16.5126214353344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	15	True	NA	NA	False	NA	NA	NA	57499934	57507971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57500114_57504659_57504787_57505301_57505401_57506357
transcript_51434.known	chr19	+	2277	4	FSM	ENSG00000152439.13	ENST00000282292.9	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	21.6384431561566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACTGGAGGCAGGAT	18	True	NA	NA	False	NA	NA	NA	57499937	57508229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57500114_57504656_57504787_57505301_57505401_57506357
transcript_51435.known	chr19	+	568	3	FSM	ENSG00000105136.22	ENST00000520540.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATACCAAGGCAAGGGG	-3	True	NA	NA	False	NA	NA	NA	57487717	57492284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57487984_57491467_57491598_57492112
transcript_51437.known	chr19	-	3376	5	FSM	ENSG00000251369.9	ENST00000457177.5	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	14.5086181285469	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTGTTAGGATTT	-12	True	NA	0	True	ATTAAA	-21	NA	57559863	57541835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57543244_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_51440.known	chr19	+	4090	4	FSM	ENSG00000121406.9	ENST00000376233.8	4090	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	4.71404520791032	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTAATTTGTCTGTT	14	True	NA	3	True	AATGAA	-17	NA	57527355	57540876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57537203
transcript_51441.nic	chr19	-	1926	4	ISM	ENSG00000251369.9	ENST00000447310.5	4305	6	-6	4665	-6	258	5prime_fragment	FALSE	canonical	3	59	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTTGGGATTTTCTCT	-18	True	NA	NA	False	TATAAA	-20	NA	57559869	57546504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_57547994_57552626_57552723_57556230_57556358_57559655
transcript_51443.nic	chr19	+	3032	4	NIC	ENSG00000171649.12	novel	4291	4	NA	NA	-43	-560	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	64.3238334954903	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTAGTCTTGGGGTTCTG	NA	False	NA	8	True	AATAAA	-20	NA	57583566	57591830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57584613_57584951_57584991_57588538_57588666_57590010
transcript_51444.known	chr19	+	4291	4	FSM	ENSG00000171649.12	ENST00000597850.2	4291	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	62.8985073131487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	-6	True	NA	18	True	AATAAA	-18	NA	57584144	57593890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57584390_57584951_57584991_57588538_57588666_57590010
transcript_51445.known	chr19	+	2860	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	74	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	109	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57584613_57588538_57588666_57590010
transcript_51446.known	chr19	+	4144	3	FSM	ENSG00000171649.12	ENST00000536878.6	4144	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTGCCACCTGTATAT	-11	True	NA	-95	True	NA	NA	NA	57584139	57593777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57584390_57588538_57588666_57590010
transcript_51449.known	chr19	+	634	4	FSM	ENSG00000183647.11	ENST00000597864.1	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.53197264742181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	4	True	NA	5	True	AATAAA	-29	NA	57599902	57612722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57612502
transcript_51452.nic	chr19	+	601	3	NIC	ENSG00000183647.11	novel	2742	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	-15	True	NA	5	True	AATAAA	-29	NA	57599883	57612722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57600135_57604276_57604407_57612502
transcript_51453.known	chr19	+	4924	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	3.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	0	True	NA	16	True	AATAAA	-21	NA	57614241	57624724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57614504_57619411_57619509_57620159
transcript_51455.known	chr19	+	2759	6	FSM	ENSG00000121417.14	ENST00000540556.5	2759	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	15.8745078663875	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	-6	True	NA	15	True	AATAAA	-16	NA	57633180	57642764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57639911_57640068_57640703
transcript_51456.nic	chr19	+	2619	5	NIC	ENSG00000121417.14	novel	2759	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	30.9313756564431	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCTTGGCATTTGA	-19	True	NA	18	True	AATAAA	-19	NA	57633167	57642767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57640703
transcript_51459.known	chr19	+	3773	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	28.2881993457028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	-19	True	NA	4	True	AATAAA	-16	NA	57633167	57644041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
transcript_51460.known	chr19	+	2239	3	FSM	ENSG00000121417.14	ENST00000391703.3	2239	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCTTGGCATTTGA	12	True	NA	18	True	AATAAA	-19	NA	57633198	57642767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633247_57634628_57634756_57640703
transcript_51461.known	chr19	+	2472	3	FSM	ENSG00000121417.14	ENST00000347302.7	2472	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	-19	True	NA	30	True	AATAAA	-31	NA	57633167	57642779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57633437_57634628_57634756_57640703
transcript_51464.nnic	chr19	-	1243	6	NNC	ENSG00000179909.16	novel	2567	5	NA	NA	0	-202	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	13.8072444752746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTATCGCTTCTGTTTT	-22	True	NA	-6	True	AATATA	-15	NA	57709204	57697568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_-_57697842_57700987_57701146_57701237_57701387_57702518_57702789_57704852_57704980_57708938
transcript_51465.known	chr19	-	2567	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	11.5108644332213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-12	True	NA	-2	True	NA	NA	NA	57709194	57697366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
transcript_51467.known	chr19	-	2903	4	FSM	ENSG00000083814.13	ENST00000600125.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.7951304200522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-2	True	NA	-2	True	AATAAA	-22	NA	57727613	57719750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57726907
transcript_51468.known	chr19	-	2431	4	FSM	ENSG00000083814.13	ENST00000317398.10	2431	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	2.35702260395516	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-13	True	NA	-2	True	AATAAA	-22	NA	57727624	57719750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57727390
transcript_51469.known	chr19	+	4560	3	FSM	ENSG00000204519.11	ENST00000282296.10	4560	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	12	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCTTTATATGGATA	-18	True	NA	20	True	AATAAA	-20	NA	57681976	57690648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57682245_57685261_57685386_57686480
transcript_51470.nic	chr19	+	1682	3	NIC	ENSG00000152443.13	novel	5262	3	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	29	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAATGCAATTCTTCA	-5	True	NA	21	True	AATAAA	-16	NA	57746811	57758146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_57747092_57750784_57750912_57756871
transcript_51471.known	chr19	-	6907	3	FSM	ENSG00000179909.16	ENST00000684351.1	6907	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATGGAATTTTTGGAA	-22	True	NA	NA	False	GGGGCT	-31	NA	57709204	57696274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57702789_57704852_57704980_57708938
transcript_51483.nnic	chr19	+	2896	4	NNC	ENSG00000269343.9	novel	5794	3	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.8369562771605	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	NA	False	NA	17	True	AATAAA	-17	NA	57830259	57846238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_57830565_57839022_57839150_57840837_57843015_57845951
transcript_51492.known	chr19	+	2196	3	FSM	ENSG00000083828.16	ENST00000396154.7	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTCTCATACTTTAC	-1	True	NA	47	True	NA	NA	NA	57769675	57780616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57769879_57776542_57776670_57778750
transcript_51495.nnic	chr19	+	616	3	Fusion	ENSG00000198466.12_ENSG00000269343.9	novel	1670	4	NA	NA	-11	-9	multi-exon	FALSE	canonical	3	12	junction_2	22.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGTGCCTGGGGAG	-1	True	NA	14	True	CATAAA	-14	NA	57819709	57854099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr19_+_57819946_57820493_57820550_57853775
transcript_51497.known	chr19	+	1974	3	FSM	ENSG00000198466.12	ENST00000423137.1	1974	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCTTATGAGTGCTG	17	True	NA	NA	False	NA	NA	NA	57849859	57860210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57850072_57856106_57856234_57858575
transcript_51498.known	chr19	-	2352	3	FSM	ENSG00000178935.5	ENST00000391701.1	2352	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-2	True	NA	-6	True	AATAAA	-17	NA	57814913	57807081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57809104_57813293_57813421_57814710
transcript_515.nnic	chr1	-	809	6	NNC	ENSG00000007923.17	novel	3555	15	NA	NA	-19	-242	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	343.232282863952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCCTCGTGGTCACAT	NA	False	NA	NA	False	ATTAAA	-15	NA	6701842	6653155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_6653416_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_51501.known	chr19	-	528	3	FSM	ENSG00000204514.11	ENST00000596604.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	24	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	103	False	NA	-2	True	AATAAA	-22	NA	57888920	57850314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57850562_57876915_57877043_57888766
transcript_51509.known	chr19	-	4685	3	FSM	ENSG00000173480.11	ENST00000312026.6	4685	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	22	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCGTGCTTCATCAAT	7	True	NA	-1	True	NA	NA	NA	57916592	57905773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57910115_57912059_57912190_57916378
transcript_51511.known	chr19	+	1977	2	FSM	ENSG00000083828.16	ENST00000396150.4	1977	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGTGTTATAATAAAGG	19	True	NA	-25	True	NA	NA	NA	57769695	57780544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57769879_57778750
transcript_51512.known	chr19	+	556	2	FSM	ENSG00000268750.7	ENST00000593873.6	556	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCATTTGTCTTCCGC	-4	True	NA	NA	False	AAGAAA	-20	NA	57819725	57858911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57819946_57858575
transcript_51513.known	chr19	+	545	2	FSM	ENSG00000198466.12	ENST00000484707.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGGGAGTTTCATTCA	17	True	NA	23	True	CATAAA	-23	NA	57849859	57854108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_57850072_57853775
transcript_51514.nnic	chr19	-	525	2	NIC	ENSG00000204514.11	novel	648	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGACGGCTCTGCGTG	NA	False	NA	-7	True	AATAAA	-17	NA	57889049	57850319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_-_57850562_57888766
transcript_51515.known	chr19	-	909	2	FSM	ENSG00000204514.11	ENST00000595295.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGGGGCTTCTT	202	False	NA	NA	False	NA	NA	NA	57888821	57858129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57858984_57888766
transcript_51516.known	chr19	-	771	2	FSM	ENSG00000204514.11	ENST00000597807.1	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCATGGGCTGTCA	54	False	NA	NA	False	NA	NA	NA	57888969	57876474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57877043_57888766
transcript_51524.known	chr19	-	3726	6	FSM	ENSG00000196724.13	ENST00000396147.6	3726	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	12.8747815515449	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTTTCTTTTTTGA	-20	True	NA	0	True	AATAAA	-18	NA	57935402	57921881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57922630_57923191_57923290_57925622_57928048_57930427_57930555_57933816_57933903_57935160
transcript_51526.known	chr19	-	597	6	FSM	ENSG00000196724.13	ENST00000600989.5	597	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	14.0513344562002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTCTTGTGAATTACA	4807	False	NA	NA	False	NA	NA	NA	57935176	57922430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930555_57933816_57933903_57935160
transcript_51530.known	chr19	-	2207	3	FSM	ENSG00000152454.4	ENST00000282308.4	2207	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTATATTTAGTAT	-9	True	NA	-18	True	AATAAA	-21	NA	57947706	57940832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57942648_57943933_57944061_57947441
transcript_51531.known	chr19	-	1958	2	FSM	ENSG00000152454.4	ENST00000598928.1	1958	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAGGTAACACACATAG	22	False	NA	-109	True	AAAACA	-23	NA	57947675	57940923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57942648_57947441
transcript_51532.known	chr19	-	4225	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	30.3150127824482	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	NA	False	NA	-21	True	AATAAA	-25	NA	58003349	57977075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
transcript_51534.known	chr19	+	1919	4	FSM	ENSG00000176593.8	ENST00000313957.8	1919	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACGGGGGTGTCTTTT	-15	True	NA	NA	False	ATTAAA	-10	NA	58002871	58007206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58003047_58003210_58003337_58004382_58004701_58005906
transcript_51536.known	chr19	+	1096	2	FSM	ENSG00000176593.8	ENST00000546956.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGGGAGAGGAAAAGTT	15	True	NA	NA	False	NA	NA	NA	58002901	58004161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58003047_58003210
transcript_51538.known	chr19	+	813	3	FSM	ENSG00000152467.10	ENST00000601162.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCCATCTGTCCTGTGG	-3	True	NA	8	True	ATTAAA	-18	NA	58034105	58038442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58034162_58035969_58036012_58037727
transcript_51539.nic	chr19	+	1532	4	ISM	ENSG00000176293.20	ENST00000313434.10	3334	5	-13	5014	0	-3889	5prime_fragment	FALSE	canonical	3	15	junction_1	12.0369800568452	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGCCATGGTGGCAC	6	True	NA	NA	False	AATACA	-12	NA	58059268	58064741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445
transcript_51543.nic	chr19	-	1806	3	ISM	ENSG00000121413.13	ENST00000594191.5	1042	4	-25	544	-25	0	5prime_fragment	FALSE	canonical	3	90	junction_2	51	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCATGAATCCAGTGG	-21	True	NA	NA	False	TTTAAA	-26	NA	58098256	58087636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_58088838_58089864_58090387_58098173
transcript_51552.known	chr19	+	2808	8	FSM	ENSG00000171606.18	ENST00000617501.5	2808	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	20.1170046863598	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	-26	True	NA	30	True	AATAAA	-22	NA	58183060	58213562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_51574.nic	chr19	+	818	7	NIC	ENSG00000198131.15	novel	895	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	68.6140575165825	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTGGTTTGAATGCAA	1	True	NA	48	True	AAAAAG	-8	NA	58228916	58277495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58277182
transcript_51575.known	chr19	+	588	7	FSM	ENSG00000198131.15	ENST00000594384.5	588	7	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_5	65.9646369908403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTAGGAAAAGTGCAAG	-2	True	NA	NA	False	NA	NA	NA	58228913	58260965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_5159.known	chr1	+	885	9	FSM	ENSG00000143033.18	ENST00000494963.5	885	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	244.114727126407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTATATGCTCTGTCT	11	True	NA	NA	False	TATAAA	-34	NA	93079295	93119338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_516.known	chr1	-	613	5	FSM	ENSG00000007923.17	ENST00000485073.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	75.6319211708919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTATGAAAGGATGC	9	True	NA	90	True	NA	NA	NA	6701804	6653808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_51602.known	chr19	+	9110	4	FSM	ENSG00000278129.2	ENST00000621650.2	9110	4	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	3.77123616632825	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGCAGACTGT	-16	True	NA	6	True	AATAAA	-14	NA	58278954	58302791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097
transcript_51604.nnic	chr19	+	925	4	NNC	ENSG00000142396.10	novel	1469	4	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	159.808218395259	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTCTGTCTCATTT	NA	False	NA	23	True	NA	NA	NA	58305344	58315204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr19_+_58305446_58306087_58306217_58312165_58312404_58314747
transcript_51606.known	chr19	+	1469	4	FSM	ENSG00000142396.10	ENST00000413518.5	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	30.1809358517739	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGATGTATATTTT	NA	False	NA	23	True	TATAAA	-32	NA	58305318	58315663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58305446_58306087_58306217_58312165_58312463_58314747
transcript_51609.known	chr19	+	922	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	136.252217107343	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	-10	True	NA	21	True	NA	NA	NA	58305373	58315202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
transcript_51617.known	chr19	-	614	4	FSM	ENSG00000283103.4	ENST00000666049.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	145.810379145885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	578	False	NA	-25	True	AATAAA	-20	NA	58326967	58314787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58315037_58322361_58322495_58325274_58325362_58326822
transcript_51629.nic	chr19	-	783	3	ISM	ENSG00000283103.4	ENST00000651375.3	2818	5	-21	4356	-17	0	5prime_fragment	FALSE	canonical	3	292	junction_1	12.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	276	False	NA	-25	True	AATAAA	-20	NA	58327269	58314787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr19_-_58315037_58325274_58325362_58326822
transcript_5163.nic	chr1	+	1992	8	ISM	ENSG00000143033.18	ENST00000471953.5	1937	14	-105	16815	-30	0	5prime_fragment	FALSE	canonical	0	0	junction_3	212.475784934833	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGCGAAACTCTGT	NA	False	NA	NA	False	NA	NA	NA	93079204	93120274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_51630.known	chr19	+	616	2	FSM	ENSG00000142396.10	ENST00000434052.5	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAGGAGAGGGAGGAT	-7	True	NA	NA	False	NA	NA	NA	58305376	58306634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58305446_58306087
transcript_51631.known	chr19	-	2708	2	FSM	ENSG00000268516.3	ENST00000597230.3	2726	2	18	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTGTGTGTTTCGT	-10	True	NA	-5	True	AATACA	-23	NA	58278808	58257269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58259692_58278522
transcript_51632.nnic	chr19	-	431	2	FSM	ENSG00000268516.3	ENST00000693494.1	439	2	8	0	8	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTTGGAAAATGCT	-2	True	NA	0	True	AATATA	-24	NA	58278800	58274700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58274854_58278522
transcript_51633.known	chr19	-	683	2	FSM	ENSG00000283103.4	ENST00000669440.2	687	2	4	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTTGGTGGTTCACC	-6	True	NA	-17	True	AATAAA	-28	NA	58327248	58314779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58315037_58326822
transcript_51634.known	chr19	+	4654	3	FSM	ENSG00000182318.6	ENST00000329665.5	4654	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTAAAGACAAATTC	-3	True	NA	6	True	AATAAA	-20	NA	58326993	58342332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58327115_58334751_58335206_58338253
transcript_51635.nic	chr19	+	1159	4	NIC	ENSG00000268895.6	novel	712	4	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	4.96655480858378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTCTGACTGGTGTGG	-19	True	NA	36	True	NA	NA	NA	58347740	58355183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58347845_58353378_58353475_58353713_58353858_58354368
transcript_51636.known	chr19	+	977	3	FSM	ENSG00000268895.6	ENST00000593960.5	977	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTTGAGGCGACTGC	-7	True	NA	NA	False	NA	NA	NA	58347752	58354502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58347845_58353378_58353475_58353713
transcript_51639.known	chr19	+	1736	3	FSM	ENSG00000269054.3	ENST00000599889.3	1835	3	14	85	14	-58	multi-exon	FALSE	canonical	1	2	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTATGCCTGCAACCG	5485	False	NA	NA	False	NA	NA	NA	58362582	58367535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58362753_58364535_58364600_58366033
transcript_51640.known	chr19	-	475	2	FSM	ENSG00000121410.12	ENST00000598345.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTCTTTGGACTCC	-35	True	NA	-21	True	AATAAA	-19	NA	58347657	58346859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58347030_58347352
transcript_51641.known	chr19	+	1762	3	FSM	ENSG00000269054.3	ENST00000663335.1	1762	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGGGGAAGCCTGTG	6	True	NA	NA	False	AATAAA	-4	NA	58362607	58367593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58362753_58364535_58364593_58366033
transcript_51644.known	chr19	+	741	6	FSM	ENSG00000083845.9	ENST00000196551.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	7525	junction_5	545.395782895321	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	-3	True	NA	31	True	AATAAA	-31	NA	58387268	58394804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_51645.known	chr19	+	536	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3560.2247471192	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	-8	True	NA	31	True	AATAAA	-31	NA	58387263	58394804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
transcript_51646.known	chr19	+	800	7	FSM	ENSG00000083845.9	ENST00000598495.5	800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3831.17359811441	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGTGCTGTTGTCTG	-3	True	NA	27	True	AATAAA	-27	NA	58387268	58394800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58387340_58388136_58388246_58388417_58388481_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_51647.known	chr19	+	578	4	FSM	ENSG00000249471.8	ENST00000599193.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCTCGCGCAGTGACC	4	True	NA	NA	False	NA	NA	NA	58451624	58455387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58451754_58453695_58453823_58454227_58454345_58455182
transcript_51648.nic	chr19	+	1993	7	NIC	ENSG00000083838.17	novel	3922	7	NA	NA	-45	0	intron_retention	FALSE	canonical	3	24	junction_1	3.48409082672781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	8998	False	NA	7	True	CATAAA	-17	NA	58476100	58481230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58476197_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_51649.known	chr19	+	2050	7	FSM	ENSG00000083838.17	ENST00000594369.6	2050	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	9.74679434480896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	-2	True	NA	7	True	CATAAA	-17	NA	58476351	58481230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_5165.known	chr1	+	760	6	FSM	ENSG00000143033.18	ENST00000473430.5	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	242.204376508766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGGACCTTTCTGT	-2	True	NA	NA	False	NA	NA	NA	93079282	93119401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_51651.known	chr19	+	1889	6	FSM	ENSG00000083838.17	ENST00000335841.8	1889	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	11.5169440391104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	-1	True	NA	7	True	CATAAA	-17	NA	58476427	58481230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479929_58480020_58480175
transcript_51652.known	chr19	+	5054	4	FSM	ENSG00000083812.13	ENST00000196482.4	5054	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAGGGAAACCTCCAC	9	True	NA	NA	False	AATAAA	-21	NA	58467079	58475436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58467184_58469179_58469307_58469727_58469845_58470730
transcript_51655.known	chr19	-	643	3	FSM	ENSG00000083807.10	ENST00000594786.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	1.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGTCTGCGTGGAT	-38	True	NA	-5	True	AATAAA	-20	NA	58499275	58498332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58498692_58498784_58498916_58499122
transcript_51658.known	chr19	+	997	2	FSM	ENSG00000083838.17	ENST00000594468.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACCATGGACACCAAGA	9043	False	NA	NA	False	NA	NA	NA	58476145	58478124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58476197_58477178
transcript_51659.known	chr19	-	474	2	FSM	ENSG00000083807.10	ENST00000599700.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCTGTATGTCTGCGT	-4	True	NA	-9	True	AATAAA	-16	NA	58499241	58498336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58498692_58499122
transcript_51661.nic	chr19	+	2480	17	NIC	ENSG00000130726.12	novel	3364	17	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	570	junction_1	595.950733990445	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	-12	True	NA	34	True	AATAAA	-14	NA	58544061	58550715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58544212_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_51662.known	chr19	+	3364	17	FSM	ENSG00000130726.12	ENST00000253024.10	3364	17	0	0	0	0	multi-exon	FALSE	canonical	3	2294	junction_7	288.405902928061	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	-10	True	NA	34	True	AATAAA	-14	NA	58544063	58550715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58545098_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_51663.nic	chr19	-	1100	6	FSM	ENSG00000130724.10	ENST00000597848.2	1208	6	-6	114	1	0	multi-exon	FALSE	canonical	3	31	junction_5	382.645214265121	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-5	True	NA	-16	True	AATAAA	-16	NA	58554996	58551565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554672
transcript_51664.nic	chr19	-	1003	6	FSM	ENSG00000130724.10	ENST00000596708.2	1074	6	-43	114	-6	0	multi-exon	FALSE	canonical	3	22	junction_5	386.233608066414	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-12	True	NA	-16	True	AATAAA	-16	NA	58555003	58551565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554776
transcript_51667.known	chr19	-	885	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	239.39540513552	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	18	True	NA	-16	True	AATAAA	-16	NA	58554973	58551565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
transcript_51668.known	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	256.858716028871	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	2	True	NA	-16	True	AATAAA	-16	NA	58555105	58551565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
transcript_51673.known	chr19	-	592	2	FSM	ENSG00000130724.10	ENST00000600804.1	592	2	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGGCATGGACCAGACA	17	True	NA	NA	False	AAAAAG	-39	NA	58555090	58553747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58554237_58554987
transcript_51675.known	chr19	-	734	7	FSM	ENSG00000130725.8	ENST00000595957.5	734	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	799.589825403556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGGGGTGGCTACATCG	-22	True	NA	NA	False	NA	NA	NA	58558954	58556140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558693
transcript_51676.known	chr19	-	1159	6	FSM	ENSG00000130725.8	ENST00000253023.8	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	1931	junction_5	132.591704114549	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTTCTTACTTC	-18	True	NA	-6	True	ATTAAA	-17	NA	58558611	58555711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272
transcript_51678.known	chr19	+	1308	4	FSM	ENSG00000286104.1	ENST00000487264.5	1308	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAATAGAGCACTTTTA	-10	True	NA	NA	False	TATAAA	-23	NA	58575444	58599801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58575589_58586154_58586357_58591497_58591625_58598966
transcript_51681.known	chr19	+	944	3	FSM	ENSG00000286104.1	ENST00000473164.1	944	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTTGACTAGAACTCAA	1	True	NA	NA	False	NA	NA	NA	58575455	58599575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58575589_58586154_58586357_58598966
transcript_51683.nnic	chr19	+	798	3	NIC	ENSG00000286104.1	novel	1308	4	NA	NA	-3	-85	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTTTCATAAGAATG	-13	True	NA	NA	False	CATAAA	-5	NA	58575441	58599490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr19_+_58575589_58591497_58591625_58598966
transcript_51686.known	chr19	+	3282	2	FSM	ENSG00000213753.11	ENST00000493504.1	3282	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTACTCTTTGTTGTGTT	5	True	NA	12	True	AATAAA	-23	NA	58575459	58584397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr19_+_58575589_58581244
transcript_51691.known	chr2	-	1744	10	FSM	ENSG00000035115.22	ENST00000356150.10	1744	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	95.3251744760475	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	1	True	NA	-6	True	AATAAA	-25	NA	264032	218143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_51696.known	chr2	-	1695	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	66.1829849734809	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	1	True	NA	2	True	AATAAA	-33	NA	264032	218135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_517.nic	chr1	-	1740	4	FSM	ENSG00000007923.17	ENST00000693337.1	1512	4	-20	-208	-19	208	multi-exon	FALSE	canonical	3	807	junction_1	51.0838091331838	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6701842	6666388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6667811_6678393_6678468_6680907_6681038_6701728
transcript_51710.known	chr2	+	577	7	FSM	ENSG00000143727.16	ENST00000453390.5	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	1110.65171058358	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCACGTTCCAGGGCC	26	False	NA	NA	False	NA	NA	NA	264964	277375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272036_272066_272191_272306_275139_275202_276979_277086_277226
transcript_51712.known	chr2	+	546	7	FSM	ENSG00000143727.16	ENST00000442386.5	546	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1263.83654226152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCAGGTGCTGCAGAG	1	True	NA	NA	False	NA	NA	NA	264899	277261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_51721.known	chr2	+	1474	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	0	0	0	0	multi-exon	FALSE	canonical	3	2212	junction_3	307.436887832283	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	8	True	NA	99	True	AATAAA	-36	NA	264946	278283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_51726.known	chr2	+	1552	6	FSM	ENSG00000143727.16	ENST00000272067.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1075.86047422517	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	NA	False	NA	99	True	AATAAA	-36	NA	264868	278283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272191_272306_275139_275202_276979_277086_277226
transcript_51731.known	chr2	+	573	6	FSM	ENSG00000143727.16	ENST00000484464.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1092.41175387305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTGTAATCACGTTCC	266	False	NA	NA	False	NA	NA	NA	265204	277369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265279_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_51733.known	chr2	+	689	5	FSM	ENSG00000143727.16	ENST00000413140.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1252.80994169108	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATGGGGTATTTTAA	-6	True	NA	14	True	AATAAA	-16	NA	264892	277506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272036_272151_276979_277086_277226
transcript_5174.known	chr1	+	1870	14	FSM	ENSG00000143033.18	ENST00000467953.5	1870	14	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	119.219552822295	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCAAAAAAATTCAAAAAAG	8646	False	NA	31	True	NA	NA	NA	93110245	93137132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_51740.known	chr2	+	1149	4	FSM	ENSG00000143727.16	ENST00000405233.5	1149	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	1228.05971624619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGAAGAGGGAAACAGAGG	-13	True	NA	NA	False	NA	NA	NA	264925	273155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_265008_271865_271940_272036_272066_272191
transcript_51747.known	chr2	-	2572	6	FSM	ENSG00000151353.15	ENST00000432667.5	2572	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	123.765908068418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCTCAGGTAGTATC	0	True	NA	NA	False	ATTAAA	-20	NA	677406	667972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_677288
transcript_51748.nic	chr2	-	1446	6	NIC	ENSG00000151353.15	novel	2572	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	128.424919700189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCACCATGCCCTCC	649	False	NA	-22	True	AATAAA	-14	NA	676803	669210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_676573
transcript_51753.known	chr2	-	654	5	FSM	ENSG00000151353.15	ENST00000405941.3	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	112.629924975559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCAGCCAGCACTG	748	False	NA	NA	False	TTTAAA	-31	NA	676704	669422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_676573
transcript_51754.known	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	12.9687123493429	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	0	True	NA	0	True	AATAAA	-32	NA	677406	663876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
transcript_51760.nic	chr2	-	1509	5	NIC	ENSG00000151353.15	novel	2572	6	NA	NA	-48	0	intron_retention	FALSE	canonical	3	29	junction_4	107.43602747682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCACCATGCCCTCC	-2	True	NA	-22	True	AATAAA	-14	NA	677454	669210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_669676_669756_669851_672807_672863_675509_676239_677288
transcript_51762.nnic	chr2	-	788	3	FSM	ENSG00000235688.3	ENST00000691420.1	722	3	-66	0	-4	0	multi-exon	FALSE	canonical	3	6	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTTTTTCTGACTC	1	True	NA	-10	True	AATAAA	-22	NA	950769	949633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_949802_949988_950387_950547
transcript_51764.nnic	chr2	-	968	2	FSM	ENSG00000235688.3	ENST00000692544.1	976	2	-6	14	-4	0	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAACACTTTACTTTTT	1	True	NA	-17	True	AATAAA	-15	NA	950769	949640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_950387_950547
transcript_51769.known	chr2	-	6817	23	FSM	ENSG00000130508.11	ENST00000252804.9	6817	23	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_19	62.2271399161874	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	-2	True	NA	-1	True	AATAAA	-22	NA	1744515	1631886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
transcript_51772.known	chr2	-	1795	10	FSM	ENSG00000032389.13	ENST00000398659.8	1795	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	90.9224333643182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTCTTTGTCCAT	4	True	NA	-2	True	NA	NA	NA	3377830	3188924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3274338_3274420_3338016_3338150_3354549_3354634_3377647
transcript_51776.known	chr2	-	1657	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	18.8331489666492	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	16	True	NA	-5	True	AATAAA	-17	NA	3377818	3188969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_51780.nic	chr2	-	1590	8	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	71.8408104131372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	3377908	3188969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3338016_3338150_3354549_3354634_3377647
transcript_51781.known	chr2	-	847	7	FSM	ENSG00000032389.13	ENST00000455162.5	847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	83.0334604575502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGCGTCTATGCCGT	46	False	NA	NA	False	NA	NA	NA	3377788	3189459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3354549_3354634_3377647
transcript_51782.nic	chr2	-	1226	6	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	85.9660398064259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-6	True	NA	-5	True	AATAAA	-17	NA	3377840	3188969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214170_3377647
transcript_51783.known	chr2	-	1771	6	FSM	ENSG00000032389.13	ENST00000443925.6	1771	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	86.3258941453838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGATTTTGAATAAAAGT	44	False	NA	NA	False	NA	NA	NA	3377790	3207803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3208958_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_51786.known	chr2	-	908	2	FSM	ENSG00000225234.1	ENST00000453806.1	908	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTTTGGGAGGCCGAG	845	False	NA	NA	False	NA	NA	NA	3482409	3481241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3481886_3482145
transcript_51787.known	chr2	+	974	2	FSM	ENSG00000235078.1	ENST00000450917.1	974	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGAATCTGTTTAGATG	NA	False	NA	NA	False	NA	NA	NA	3519274	3523197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3519957_3522905
transcript_51788.known	chr2	-	2181	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_3	49.5580467734555	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTGAATTTTGACAA	-10	True	NA	-3	True	AATAAA	-16	NA	3519531	3497365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
transcript_51796.known	chr2	-	5289	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	0	0	0	0	multi-exon	TRUE	canonical	3	456	junction_6	32.8621114255755	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTCGTCTTTGTCTTCT	-2	True	NA	-1	True	AATAAA	-33	NA	3558333	3541429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
transcript_51799.nnic	chr2	-	1151	8	NNC	ENSG00000171865.10	novel	5289	8	NA	NA	-40	-784	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	176.683505807672	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGTGAGATTTCCAC	NA	False	NA	-20	True	AATAAA	-22	NA	3558373	3545576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_3545841_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
transcript_518.nic	chr1	-	1552	4	FSM	ENSG00000007923.17	ENST00000693337.1	1512	4	-20	-20	-19	20	multi-exon	FALSE	canonical	3	807	junction_1	51.0838091331838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAAAATTAGCCAGGC	NA	False	NA	NA	False	ACTAAA	-3	NA	6701842	6666576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6667811_6678393_6678468_6680907_6681038_6701728
transcript_51806.known	chr2	+	4333	3	FSM	ENSG00000234171.4	ENST00000664922.2	4344	3	11	0	6	0	multi-exon	FALSE	canonical	3	63	junction_1	43	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	9	True	NA	NA	False	NA	NA	NA	3558473	3564842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3558999_3559447_3559730_3561316
transcript_51807.known	chr2	+	1115	3	FSM	ENSG00000234171.4	ENST00000438436.4	1275	3	160	0	160	0	multi-exon	FALSE	canonical	3	66	junction_1	41.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	-44	True	NA	NA	False	AATAAA	-39	NA	3558627	3561734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3558999_3559403_3559730_3561316
transcript_51809.known	chr2	+	836	2	FSM	ENSG00000234171.4	ENST00000426725.2	982	2	139	7	110	-3	multi-exon	FALSE	canonical	3	67	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	25	True	NA	NA	False	AATAAA	-36	NA	3558577	3561731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3558999_3561316
transcript_51810.known	chr2	+	704	7	FSM	ENSG00000171863.15	ENST00000406376.1	704	7	0	0	0	0	multi-exon	TRUE	canonical	2	363	junction_1	4141.72288694237	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTCACAGTACT	4	True	NA	NA	False	AATAAA	-1	NA	3575357	3580901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575449_3575600_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51811.known	chr2	+	710	7	FSM	ENSG00000171863.15	ENST00000646909.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4266.6979425937	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	-4	True	NA	NA	False	AATAAA	-19	NA	3575315	3580919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575351_3575556_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51812.known	chr2	+	732	7	FSM	ENSG00000171863.15	ENST00000645674.2	732	7	0	0	0	0	multi-exon	FALSE	canonical	3	7472	junction_1	1928.32852203376	20606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	-12	True	NA	NA	False	AATAAA	-20	NA	3575259	3580920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51813.known	chr2	+	557	7	FSM	ENSG00000171863.15	ENST00000647131.1	557	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	4215.16451504433	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	1	True	NA	NA	False	NA	NA	NA	3575320	3580878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576558_3576631_3577709_3577775_3580109_3580261_3580804
transcript_51814.known	chr2	+	1425	7	FSM	ENSG00000118004.18	ENST00000349077.9	1425	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	0	True	NA	NA	False	AAAACA	-24	NA	3595111	3644644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_51815.known	chr2	+	1633	6	FSM	ENSG00000118004.18	ENST00000382062.6	1633	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.748331477354788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	NA	False	NA	NA	False	AAAACA	-24	NA	3594831	3644644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3640277_3640332_3643443_3643540_3643726
transcript_51816.known	chr2	+	1312	6	FSM	ENSG00000118004.18	ENST00000487365.5	1312	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	NA	False	NA	20	True	AATAAA	-20	NA	3594954	3644446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_3595169_3604314_3604471_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_51818.known	chr2	+	2021	3	FSM	ENSG00000236106.3	ENST00000655406.1	2021	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAGTATCCCCAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5726252	5730355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_5726580_5728086_5728153_5728727
transcript_51820.known	chr2	+	1746	2	FSM	ENSG00000236106.3	ENST00000413960.2	1769	2	11	12	11	-12	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATGTGAGTGGCTGC	NA	False	NA	NA	False	AATAAA	-4	NA	5726448	5730342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_5726580_5728727
transcript_51827.nnic	chr2	+	1481	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	41	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	NA	False	NA	-69	True	AATAAA	-15	NA	7875649	7892268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7876007_7883431_7883560_7891272
transcript_51829.nnic	chr2	+	2505	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	58	junction_1	16	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	NA	False	NA	17	True	AATAAA	-17	NA	7876616	7891784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7883431_7883560_7891272
transcript_5183.known	chr1	+	4552	28	FSM	ENSG00000122483.18	ENST00000401026.7	4552	28	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.7919808948754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	427	False	NA	NA	False	AATAAA	-21	NA	93180362	93278607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93180883_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
transcript_51831.nnic	chr2	+	2936	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	58	junction_1	16	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	24	False	NA	-69	True	AATAAA	-15	NA	7876669	7892268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7883431_7883560_7891272
transcript_51842.nnic	chr2	+	1373	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	40.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	1153	False	NA	17	True	AATAAA	-17	NA	7877798	7891784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7883381_7883560_7891272
transcript_51845.nnic	chr2	+	2323	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	99	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATTATTCTTAAATA	24	False	NA	16	True	AATAAA	-16	NA	7876669	7891783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7891272
transcript_51847.nnic	chr2	+	2808	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	99	junction_1	0	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	24	False	NA	-69	True	AATAAA	-15	NA	7876669	7892268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_7878482_7891272
transcript_51849.known	chr2	+	1299	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0.5	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTTTTTAAGAT	-1	True	NA	NA	False	AATAAA	-25	NA	8682055	8684461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_8682514_8682842_8682907_8683684
transcript_51852.known	chr2	-	7348	30	FSM	ENSG00000134313.17	ENST00000256707.8	7348	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.2364083339083	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCACATGTCTGAA	-4	True	NA	66	True	AATAAA	-16	NA	8837613	8728857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747144_8747202_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_51854.known	chr2	-	7622	13	FSM	ENSG00000143797.12	ENST00000305997.8	7622	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	14.5093360748634	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTGTGTTTGCTAA	23	True	NA	0	True	ATTAAA	-17	NA	9003684	8852689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_8858905_8860612_8860765_8862589_8862723_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_8943186_8943265_8958496_8958643_9003539
transcript_51862.known	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	158.71344991422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	445	False	NA	NA	False	TATAAA	-23	NA	9423229	9403474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
transcript_51863.nic	chr2	-	1087	8	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	159.177990479404	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-37	True	NA	-22	True	ATTAAA	-22	NA	9423536	9406659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_51868.nic	chr2	-	1554	7	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	128.406580828243	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-12	True	NA	-22	True	ATTAAA	-22	NA	9423220	9406659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_51869.known	chr2	-	4153	7	FSM	ENSG00000119185.13	ENST00000355346.9	4153	7	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_6	42.1966296705739	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-29	True	NA	NA	False	TATAAA	-23	NA	9423528	9403474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_51871.known	chr2	-	874	7	FSM	ENSG00000119185.13	ENST00000488451.5	874	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	171.495059857582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGTTAACTCTCAAT	19	True	NA	-29	True	ATTAAA	-15	NA	9423480	9406666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_51874.nic	chr2	-	897	6	NIC	ENSG00000119185.13	novel	4153	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	136.825436231718	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	110	False	NA	-22	True	ATTAAA	-22	NA	9423564	9406659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
transcript_51876.known	chr2	-	861	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	131.266141864534	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-1	True	NA	-22	True	ATTAAA	-22	NA	9423500	9406659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
transcript_51877.nic	chr2	-	1403	6	NIC	ENSG00000119185.13	novel	2126	6	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_5	158.559011096815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACTCTCAATGAAGTC	-12	True	NA	-23	True	ATTAAA	-21	NA	9423220	9406660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_51878.known	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	111.687062813918	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-7	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_51879.known	chr2	-	1043	6	FSM	ENSG00000119185.13	ENST00000456913.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_5	46.1952378498044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGGTCGGCTTGCT	-5	True	NA	NA	False	NA	NA	NA	9423430	9407029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_51882.known	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	136.861928599593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	37	True	NA	NA	False	NA	NA	NA	9423462	9406348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
transcript_51885.known	chr2	-	560	4	FSM	ENSG00000119185.13	ENST00000497031.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	153.338405713202	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	230	False	NA	-10	True	ATTAAA	-34	NA	9423444	9406647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9423372
transcript_51888.known	chr2	+	2259	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	0	0	0	0	multi-exon	TRUE	canonical	3	784	junction_10	109.390763322805	787	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	-18	True	NA	24	True	AATAAA	-23	NA	9423653	9473101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
transcript_51895.known	chr2	-	4391	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_17	19.5151096889779	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCTAAGTATAAAACTT	24	False	9555854	-5	True	AATAAA	-17	NA	9555830	9488485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
transcript_519.known	chr1	-	745	4	FSM	ENSG00000007923.17	ENST00000465911.1	745	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	420.155526759635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTAATATCTTATTTAT	-6	True	NA	NA	False	AATAAA	-16	NA	6701819	6670460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6670911_6678393_6678468_6680907_6681038_6701728
transcript_51902.known	chr2	+	863	6	FSM	ENSG00000134330.19	ENST00000482918.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	58.264912254289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGATGATTTTTCAGG	7	True	NA	-1	True	AATAAA	-2	NA	9473817	9488444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9473900_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51906.known	chr2	+	2176	6	FSM	ENSG00000134330.19	ENST00000497473.6	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	29.962643408084	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	5	True	NA	NA	False	NA	NA	NA	9474550	9489742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9474648_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51908.known	chr2	+	837	6	FSM	ENSG00000134330.19	ENST00000351760.11	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.7070498403545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	32	False	NA	17	True	AATAAA	-20	NA	9474577	9488462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9474648_9475986_9476040_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51910.nic	chr2	+	894	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	59.6882526130561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	NA	False	NA	17	True	AATAAA	-20	NA	9473751	9488462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51911.nic	chr2	+	1173	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	59.6882526130561	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGAGAACTGTTT	NA	False	NA	29	True	TATAAA	-15	NA	9473632	9488622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51912.known	chr2	+	2137	5	FSM	ENSG00000134330.19	ENST00000470914.5	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	60.1123947285416	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	-9	True	NA	NA	False	NA	NA	NA	9474536	9489742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9474648_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_51918.known	chr2	-	2196	6	FSM	ENSG00000134308.14	ENST00000238081.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	2338	junction_5	582.685026407921	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGATTGTGAGTGCCT	-4	True	NA	-7	True	AATAAA	-29	NA	9630997	9583966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
transcript_51924.known	chr2	+	2267	15	FSM	ENSG00000115750.17	ENST00000263663.10	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	8.71545659581122	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCAATTTTTGCA	4	True	NA	29	True	TATAAA	-45	NA	9843473	9934416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_51928.nic	chr2	+	2556	14	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-40	13713	-9	6994	5prime_fragment	FALSE	canonical	3	52	junction_9	9.0331408234398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTTGGTCAGTGAAATA	-36	True	NA	NA	False	AATAAA	-14	NA	9843433	9920703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597
transcript_51930.known	chr2	+	1592	14	FSM	ENSG00000115750.17	ENST00000434858.5	1592	14	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	19.9902343021692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATCAAGATCCAAG	4	True	NA	NA	False	AATACA	-10	NA	9843524	9933946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_51931.nic	chr2	+	1528	13	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-121	15308	-90	5399	5prime_fragment	FALSE	canonical	3	52	junction_9	9.24511883223911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAAGTCAAATTTTGTC	NA	False	NA	NA	False	TATAAA	-5	NA	9843352	9919108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040
transcript_51933.nic	chr2	+	1839	12	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-40	20707	-9	0	5prime_fragment	FALSE	canonical	3	52	junction_9	9.63207451716048	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATAGCAAGTCCATTTG	-36	True	NA	NA	False	AATAAA	-30	NA	9843433	9913709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158
transcript_51935.nic	chr2	+	1277	11	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-40	22870	-9	-2163	5prime_fragment	FALSE	canonical	3	52	junction_9	9.87927122818278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAAAAAGGTATTTTAA	-36	True	NA	NA	False	AATGAA	-3	NA	9843433	9911546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510
transcript_51938.nnic	chr2	+	1070	8	NNC	ENSG00000115750.17	novel	2267	15	NA	NA	1	11052	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	27.2546569696009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGTTTTCAATA	5	True	NA	NA	False	AATAAA	-21	NA	9843474	9879816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9879520
transcript_51939.nic	chr2	+	1397	7	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-61	57837	-30	7815	5prime_fragment	FALSE	canonical	3	62	junction_1	8.98919104010787	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACGTGCCAAAATTCTTA	NA	False	NA	NA	False	AATAAA	-34	NA	9843412	9876579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864
transcript_5194.nic	chr1	+	1095	8	ISM	ENSG00000122483.18	ENST00000690025.1	4752	29	-47	73099	-39	-11048	5prime_fragment	FALSE	canonical	3	46	junction_1	9.68061391205567	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTATTCTGTTGTAGA	741	False	NA	NA	False	TATAAA	-33	NA	93180676	93205631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509
transcript_51941.known	chr2	+	505	5	FSM	ENSG00000115750.17	ENST00000404869.7	505	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.5396575758203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACCAATCACTGGAC	27	True	NA	NA	False	NA	NA	NA	9843496	9852124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9851967
transcript_51943.known	chr2	-	1572	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTCTGGCTTCTTT	2433	False	NA	1	True	AATACA	-24	NA	10040663	10039091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10039100_10040700
transcript_51946.known	chr2	+	1996	12	FSM	ENSG00000171848.16	ENST00000641498.1	1996	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	507.501870696385	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGGAAGGAAAAGA	0	True	NA	NA	False	AAGAAA	-43	NA	10122738	10199288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10141853_10141955_10142254_10142376_10198591
transcript_51955.known	chr2	+	3258	10	FSM	ENSG00000171848.16	ENST00000304567.10	3258	10	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_4	85.32219255979	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTGATTGGTAAAATT	0	True	NA	19	True	AATAAA	-16	NA	10122738	10131414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_51960.known	chr2	+	644	5	FSM	ENSG00000171848.16	ENST00000491447.1	644	5	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_4	55.3731658838467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCACTAATTGTT	13	False	NA	NA	False	CATAAA	-44	NA	10122751	10124878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716
transcript_51962.known	chr2	-	2476	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_6	42.8231033651017	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTATCTTCACC	0	True	NA	NA	False	AATAAA	-22	NA	10448327	10439967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
transcript_51967.known	chr2	-	3498	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_10	27.6504520758703	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACTCCAAGAAAATTT	0	True	NA	NA	False	AATAAA	-29	NA	10689975	10570753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_51973.known	chr2	-	3418	20	FSM	ENSG00000115761.16	ENST00000538384.5	3418	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	55.9077197727998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTTCTTTGAGAAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	10689987	10570767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10681970_10682070_10684566_10684613_10689795
transcript_51974.known	chr2	-	3333	20	FSM	ENSG00000115761.16	ENST00000345985.7	3333	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	56.4053886347396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTTTGAGAAAGACT	3	True	NA	NA	False	AATAAA	-17	NA	10689972	10570765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_51981.nic	chr2	-	1726	18	ISM	ENSG00000115761.16	ENST00000381685.10	3498	21	-16	18824	-4	-18810	5prime_fragment	FALSE	canonical	3	180	junction_7	28.1174009341923	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTACTCCTTATCAGT	NA	False	NA	0	True	AAGAAA	-37	NA	10689991	10589577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_51987.nic	chr2	-	1422	16	ISM	ENSG00000115761.16	ENST00000381685.10	3498	21	-16	32062	-4	19207	5prime_fragment	FALSE	canonical	3	180	junction_5	29.0825644597507	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAGAAGAAACACGTG	NA	False	NA	NA	False	GATAAA	-9	NA	10689991	10602815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_51998.known	chr2	-	2509	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	3047.69408418385	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	NA	False	NA	-29	True	AATAAA	-14	NA	10812839	10783392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
transcript_52.known	ERCC-00148	+	478	1	FSM	ERCC-00148A	DQ883642	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00148_+_0_500
transcript_520.known	chr1	-	581	5	FSM	ENSG00000007923.17	ENST00000460594.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	382.176987794922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAGCATTGTCTTTCA	-10	True	NA	NA	False	ATTAAA	-16	NA	6701823	6654107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_6654288_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_52007.known	chr2	-	2279	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	0	0	0	multi-exon	FALSE	canonical	3	7534	junction_3	656.3326297186	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGAGCAATTTCTCT	25	False	10812810	-27	True	AATAAA	-16	NA	10812785	10783390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
transcript_52034.known	chr2	+	2292	1	FSM	ENSG00000162975.5	ENST00000295082.3	2292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCGTGTTGTAGGTTCT	-6	True	NA	15	True	AATAAA	-18	NA	10911933	10914225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_10911900_10914200
transcript_52036.known	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	32.8312182059833	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	13	True	NA	5	True	AATAAA	-16	NA	11155466	11178856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
transcript_52039.known	chr2	-	2227	9	FSM	ENSG00000169016.17	ENST00000455198.5	2227	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.1430064762207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTGAGTGGAGTGAG	281	False	NA	NA	False	AATAAA	-10	NA	11465879	11445299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11458280_11458352_11465771
transcript_52040.known	chr2	-	1253	8	FSM	ENSG00000169016.17	ENST00000437573.5	1253	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.686928095213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTTGAGAATTTATGT	7	False	NA	NA	False	AAGAAA	-42	NA	11466153	11446476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11465771
transcript_52041.known	chr2	-	3296	8	FSM	ENSG00000169016.17	ENST00000444832.5	3296	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.2869852466762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	4	False	NA	0	True	TATAAA	-25	NA	11466156	11444374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11458280_11458352_11465771
transcript_52042.known	chr2	-	3139	7	FSM	ENSG00000169016.17	ENST00000428221.5	3139	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.973540806349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	14	False	NA	0	True	TATAAA	-25	NA	11466146	11444374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453723_11457178_11457234_11465771
transcript_52043.known	chr2	-	3230	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.2407909945038	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-1	True	NA	0	True	TATAAA	-25	NA	11466161	11444374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
transcript_52045.known	chr2	-	3191	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.7960372045236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	NA	False	NA	0	True	TATAAA	-25	NA	11466177	11444374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
transcript_52049.nnic	chr2	+	1526	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	530	-62	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_4	14.8856754409511	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTGTCTCTTGTTAGTCA	11	True	NA	18	True	NA	NA	NA	11482870	11581203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
transcript_52050.nnic	chr2	+	1588	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	530	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_4	14.8856754409511	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	11	True	NA	9	True	AATAAA	-17	NA	11482870	11581265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
transcript_52053.nic	chr2	+	1731	8	ISM	ENSG00000134324.12	ENST00000256720.6	5384	20	3	43096	3	0	5prime_fragment	FALSE	canonical	3	42	junction_5	2.47435829652697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGTGAGAG	-27	True	NA	NA	False	NA	NA	NA	11746590	11784313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828
transcript_52055.known	chr2	+	629	2	FSM	ENSG00000134324.12	ENST00000460096.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGTGAGAG	NA	False	NA	NA	False	NA	NA	NA	11782363	11784313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11782508_11783828
transcript_52056.known	chr2	+	1059	2	FSM	ENSG00000228496.2	ENST00000455754.2	1085	2	26	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGCGTCATGTGTCAT	25	False	NA	4	True	CATAAA	-16	NA	11681459	11683323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11681493_11682297
transcript_52057.known	chr2	+	1170	2	FSM	ENSG00000228496.2	ENST00000435175.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCATGTGTCATTTTGT	26	False	NA	9	True	CATAAA	-21	NA	11681460	11683328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_11681493_11682190
transcript_52060.known	chr2	+	2778	3	FSM	ENSG00000071575.12	ENST00000381465.2	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	147.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-25	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_12717011_12723259_12723553_12740325
transcript_52061.known	chr2	+	830	3	FSM	ENSG00000071575.12	ENST00000405331.3	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	136.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	-1	True	NA	17	True	AATAAA	-23	NA	12718237	12724825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_12718578_12723259_12723553_12724628
transcript_52062.known	chr2	+	4344	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	13	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-24	True	NA	77	True	AATAAA	-22	NA	12716935	12742734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_12718578_12723259_12723553_12740325
transcript_52063.known	chr2	-	7278	52	FSM	ENSG00000151779.13	ENST00000281513.10	7278	52	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_38	24.2373563435063	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGCTGCCGCTTTTT	-11	True	NA	-27	True	AATAAA	-16	NA	15561334	15166915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
transcript_52065.known	chr2	+	2484	26	FSM	ENSG00000079785.16	ENST00000233084.8	2484	26	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_11	144.837586282015	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_52067.known	chr2	+	2451	26	FSM	ENSG00000079785.16	ENST00000678137.1	2451	26	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_18	343.614891411883	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623468_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_52069.known	chr2	+	2739	25	FSM	ENSG00000079785.16	ENST00000678536.1	2739	25	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_11	147.284847791241	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	168	False	NA	11	True	AATAAA	-14	NA	15591732	15631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_52071.known	chr2	+	2423	25	FSM	ENSG00000079785.16	ENST00000677437.1	2423	25	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	352.897293840573	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_52073.known	chr2	+	2821	24	FSM	ENSG00000079785.16	ENST00000678755.1	2821	24	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_11	150.187482078757	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCATGAAGGTTTG	168	False	NA	7	True	AATAAA	-10	NA	15591732	15631097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628840_15629601_15629698_15629989_15630111_15630775
transcript_52075.known	chr2	+	2384	24	FSM	ENSG00000079785.16	ENST00000617198.5	2384	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	358.429450628021	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	287	False	NA	11	True	AATAAA	-14	NA	15591851	15631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_52076.known	chr2	+	2430	23	FSM	ENSG00000079785.16	ENST00000678786.1	2430	23	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_20	366.640818335086	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	168	False	NA	11	True	AATAAA	-14	NA	15591732	15631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15629601_15629698_15629989_15630111_15630775
transcript_52078.nic	chr2	+	331	5	ISM	ENSG00000079785.16	ENST00000459706.2	3354	18	-37	25517	-15	-25517	5prime_fragment	FALSE	canonical	3	1506	junction_1	107.755220291177	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAACAACAATTAAAAC	266	False	NA	34	True	NA	NA	NA	15591830	15597440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374
transcript_52079.known	chr2	-	1313	4	FSM	ENSG00000233718.9	ENST00000641263.1	1313	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.71404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGATCGATTGACTTCA	4222	False	NA	0	True	ATTAAA	-14	NA	15941582	15936264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_15937177_15938499_15938726_15940973_15941098_15941531
transcript_52081.known	chr2	-	770	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	0	6	0	multi-exon	FALSE	canonical	3	10	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGCGCCGCGGTGGT	4081	False	NA	NA	False	AATAAA	-23	NA	15941723	15939897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_15940352_15940973_15941098_15941531
transcript_52083.known	chr2	+	1693	2	FSM	ENSG00000134323.12	ENST00000638417.1	1693	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTCAACCTTTTCCTT	15	False	NA	19	True	AATAAA	-19	NA	15940565	15947007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_15940744_15945492
transcript_52084.known	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	17	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	4566	False	NA	NA	False	NA	NA	NA	15941238	15940120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_15940352_15940973
transcript_52091.known	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	6.99704778359777	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-5	True	NA	0	True	ATTAAA	-23	NA	16665834	16549458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
transcript_52101.nic	chr2	+	1587	4	NIC	ENSG00000163032.12	novel	576	3	NA	NA	-1	655	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	237.101009885848	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCCCTAATTCTTATT	-10	True	NA	22	True	AATAAA	-28	NA	17539965	17656183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_17540183_17592069_17592237_17649409_17649626_17655196
transcript_52102.nic	chr2	+	1843	4	NIC	ENSG00000163032.12	novel	576	3	NA	NA	-1	-579	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	237.101009885848	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTGCTAACAACGTAT	-10	True	NA	25	True	AATAAA	-17	NA	17539965	17656439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_17540183_17592069_17592237_17649409_17649626_17655196
transcript_52105.known	chr2	+	2428	4	FSM	ENSG00000163032.12	ENST00000295156.9	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	44.0100998509307	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTATTCATTCATTTA	-1	True	NA	NA	False	ACTAAA	-12	NA	17540695	17657018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17540919_17592069_17592237_17649409_17649626_17655196
transcript_52113.nnic	chr2	+	1698	4	NNC	ENSG00000163032.12	novel	992	4	NA	NA	2956	-579	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	236.160021077988	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTGCTAACAACGTAT	-16	True	NA	25	True	AATAAA	-17	NA	17544115	17656439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_17544188_17592069_17592237_17649409_17649626_17655196
transcript_52117.known	chr2	-	5240	28	FSM	ENSG00000163029.16	ENST00000448223.7	5240	28	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_27	76.6114311670232	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	3	True	NA	1	True	AATAAA	-19	NA	17753810	17663811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_52119.known	chr2	-	5173	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_26	39.1884575749109	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17	True	NA	1	True	AATAAA	-19	NA	17753830	17663811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_5213.known	chr1	-	1296	5	FSM	ENSG00000117500.13	ENST00000479918.5	1296	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	147.287771047022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATGATGGATTGAATAAA	782	False	NA	-40	True	TATAAA	-16	NA	93180361	93154231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93154889_93156035_93156085_93156299_93156484_93160128_93160227_93180053
transcript_52137.known	chr2	+	9854	14	FSM	ENSG00000178295.15	ENST00000317402.11	9854	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	14.5581876757503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGATGCCAGATGCCAG	-8	True	NA	NA	False	ATTAAA	-21	NA	17753857	17788941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17753968_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_52138.known	chr2	+	9957	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	13.8918050850388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAGATGCCAGAAGCC	-7	True	NA	NA	False	ATTAAA	-26	NA	17754137	17788946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_52141.known	chr2	+	2341	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	2	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	8	True	NA	20	True	AATAAA	-20	NA	17878666	17932958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_17878807_17917679_17917872_17930949
transcript_52143.known	chr2	-	1560	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTCTTTGGAGGC	6	True	NA	-7	True	AATAAA	-22	NA	18560653	18554722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_18555809_18560179
transcript_52144.known	chr2	-	737	2	FSM	ENSG00000240857.2	ENST00000468071.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAACTTGTTACTTGAA	-20	True	NA	NA	False	TATAAA	-41	NA	18560679	18555121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_18555809_18560629
transcript_52147.nnic	chr2	-	884	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	32	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-14	True	NA	-11	True	AATAAA	-18	NA	19901696	19896630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_52148.known	chr2	-	941	3	FSM	ENSG00000183891.6	ENST00000333610.4	941	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	66.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-18	True	NA	-11	True	AATAAA	-18	NA	19901983	19896630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_19897127_19897868_19898036_19901705
transcript_5215.known	chr1	-	3847	5	FSM	ENSG00000117500.13	ENST00000370290.7	3847	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	138.631480912526	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTAACTGCCAGT	627	False	NA	-17	True	AATAAA	-8	NA	93180516	93151857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93154889_93156299_93156484_93158814_93158886_93160128_93160227_93180053
transcript_52151.nnic	chr2	-	761	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-55	-111	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	32	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-14	True	NA	-29	True	ATTAAA	-15	NA	19901696	19896753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_52153.nnic	chr2	-	889	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-55	-111	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	69.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-14	True	NA	-29	True	ATTAAA	-15	NA	19901696	19896753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_19897127_19897868_19898164_19901475
transcript_52154.known	chr2	-	6898	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_4	14.6188255058879	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTGTTTATTCCACG	5	True	NA	-1	True	AATAAA	-16	NA	19990105	19910262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_52156.nic	chr2	-	3138	21	ISM	ENSG00000118965.16	ENST00000281405.9	6898	27	-62	24769	-62	0	5prime_fragment	FALSE	canonical	3	111	junction_5	13.947311568901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGAGTTCTCTTGCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	19990167	19935031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_52164.nic	chr2	-	923	5	ISM	ENSG00000118965.16	ENST00000414212.5	3483	28	-119	64858	-62	-30244	5prime_fragment	FALSE	canonical	3	125	junction_4	9.19238815542512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTCGTTTTTATTG	NA	False	NA	NA	False	AATATA	-20	NA	19990167	19978415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_52167.known	chr2	+	1132	3	FSM	ENSG00000227210.2	ENST00000416575.2	1132	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGAAATAAATTATATTG	NA	False	NA	NA	False	AATAAA	-19	NA	19990210	20004795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_19990495_19999205_19999278_20004019
transcript_52169.known	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3609	junction_3	333.62874409872	3404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-4	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
transcript_5217.known	chr1	-	2599	5	FSM	ENSG00000223745.8	ENST00000655606.1	2599	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.4171171105366	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGAGAATGG	-29	True	NA	NA	False	NA	NA	NA	93345846	93337062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_52172.known	chr2	-	6309	21	FSM	ENSG00000055917.16	ENST00000361078.7	6309	21	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_20	115.238828091924	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20	True	NA	-10	True	AATAAA	-1	NA	20350844	20248736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
transcript_52176.known	chr2	-	2383	7	FSM	ENSG00000118960.13	ENST00000304031.8	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.76017139089283	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-13	True	NA	-34	True	AATAAA	-19	NA	20651098	20617817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_52178.nic	chr2	-	1271	6	ISM	ENSG00000118960.13	ENST00000304031.8	2383	7	-9	5771	-9	-1401	5prime_fragment	FALSE	canonical	3	37	junction_2	3.24961536185438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGGTATAACTGGCATA	-22	True	NA	NA	False	ATTAAA	-15	NA	20651107	20623588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_52179.nnic	chr2	-	2009	5	NIC	ENSG00000118960.13	novel	2383	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	17.3853386507137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-13	True	NA	-34	True	AATAAA	-19	NA	20651098	20617817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20651031
transcript_52181.known	chr2	-	1375	3	FSM	ENSG00000118960.13	ENST00000406618.3	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAGAAGCAAAACTGG	1	True	NA	NA	False	AATAAA	-25	NA	20651084	20640024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20641181_20645339_20645506_20651031
transcript_52185.known	chr2	-	2045	9	FSM	ENSG00000118961.15	ENST00000381090.7	2045	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.5598880977618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCCCACCATGCT	-26	True	NA	-29	True	NA	NA	NA	20823114	20684043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20684924_20685546_20685658_20686906_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_5219.known	chr1	-	5789	4	FSM	ENSG00000117500.13	ENST00000370282.8	5789	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	10.8730042868667	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTCTCTCTCAAAATAT	3	True	NA	NA	False	AATAAA	-16	NA	93180413	93149741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93154889_93156299_93156484_93160128_93160227_93180053
transcript_52194.known	chr2	-	3917	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	24.1367631080336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	-13	True	NA	-16	True	TTTAAA	-7	NA	20823101	20684030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_52195.nic	chr2	-	2940	7	NIC	ENSG00000118961.15	novel	3917	7	NA	NA	-3	-646	intron_retention	FALSE	canonical	3	7	junction_5	56.8497043869965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGACCTGGTCTGGCCT	NA	False	NA	-6	True	AATAAA	-14	NA	20823133	20685057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801291_20801466_20823036
transcript_52198.known	chr2	-	3807	6	FSM	ENSG00000118961.15	ENST00000541941.5	3807	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	56.9020210537376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20823036
transcript_52199.known	chr2	-	1179	6	FSM	ENSG00000118961.15	ENST00000626491.2	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	57.4887815143094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTTGGTAGGCAGGA	-13	True	NA	NA	False	NA	NA	NA	20823101	20686624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801309_20801466_20823036
transcript_52201.known	chr2	-	3837	6	FSM	ENSG00000118961.15	ENST00000435420.6	3837	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	63.7482548780749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801291_20801466_20823036
transcript_52204.known	chr2	-	3728	6	FSM	ENSG00000118961.15	ENST00000440866.6	3728	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	52.1819892300016	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_52206.known	chr2	-	3663	5	FSM	ENSG00000118961.15	ENST00000619656.4	3663	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	69.5323665640686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20823036
transcript_52212.nnic	chr2	-	521	3	NNC	ENSG00000228999.4	novel	2067	2	NA	NA	-72773	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAACCCTAGCAGTGTC	NA	False	NA	-42	True	AAAACA	-37	NA	22038453	21933235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_21933548_21934966_21935095_22038372
transcript_52213.known	chr2	+	1557	8	FSM	ENSG00000173960.14	ENST00000404924.5	1557	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.741333753979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGACAGCAGGGATTTAT	-10	True	NA	NA	False	TATAAA	-39	NA	23927311	24000203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_23927616_23939539_23939663_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_52215.known	chr2	+	6022	7	FSM	ENSG00000173960.14	ENST00000309033.5	6022	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	44.3270672263448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCCTTGTTATAAAATA	10	True	NA	20	True	ATTAAA	-17	NA	23940462	24004909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_23940649_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_52219.known	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	253.656933672234	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	3	True	NA	14	True	AATAAA	-19	NA	24049730	24063681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
transcript_5222.known	chr1	-	1613	4	FSM	ENSG00000223745.8	ENST00000457387.2	1613	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.8193010820572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATAGTTCTTATTTT	-29	True	NA	NA	False	AAAAAG	-14	NA	93345846	93338130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93339537_93339648_93339680_93340457_93340511_93345723
transcript_52224.nic	chr2	+	1072	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	245.447932360409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	0	True	NA	14	True	AATAAA	-19	NA	24049727	24063681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063018
transcript_52225.nic	chr2	+	1027	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	246.27360292975	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	0	True	NA	14	True	AATAAA	-19	NA	24049727	24063681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063063
transcript_52227.nic	chr2	+	1051	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	265.122966753165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	0	True	NA	14	True	AATAAA	-19	NA	24049727	24063681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063018
transcript_52228.known	chr2	+	953	5	FSM	ENSG00000119782.14	ENST00000452109.1	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	267.19316514462	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACAAACTCCTGTCCA	43	False	NA	4	True	AATAAA	-9	NA	24049770	24063671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063063
transcript_52230.known	chr2	+	1010	4	FSM	ENSG00000119782.14	ENST00000380991.8	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_3	184.645606500669	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	12	True	NA	14	True	AATAAA	-19	NA	24049700	24063681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063018
transcript_52231.known	chr2	+	925	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	157.442758557586	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	13	True	NA	14	True	AATAAA	-19	NA	24049740	24063681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
transcript_52232.known	chr2	-	3848	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	26.0810701893581	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	0	True	NA	-15	True	AATAAA	-15	NA	24047391	24029346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
transcript_52236.known	chr2	-	651	4	FSM	ENSG00000115128.7	ENST00000233468.5	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	2344	junction_3	103.760407777833	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	6	True	NA	-7	True	AATAAA	-20	NA	24076326	24067585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24067852_24068320_24068460_24074075_24074195_24076199
transcript_52238.nnic	chr2	-	668	3	NIC	ENSG00000115128.7	novel	651	4	NA	NA	-89	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_2	1153	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	-1	True	NA	-7	True	AATAAA	-20	NA	24076462	24067585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_24067852_24068320_24068460_24076199
transcript_5224.known	chr1	+	10124	3	FSM	ENSG00000117505.13	ENST00000370272.9	10124	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_2	10	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTTACATATGTCTTT	-30	True	NA	NA	False	TATAAA	-15	NA	93345906	93369493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93346866_93353907_93354072_93360492
transcript_52242.known	chr2	-	720	2	FSM	ENSG00000115128.7	ENST00000478050.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	2344	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGTATAAAAGTAACA	8823	False	24076392	NA	False	AATAAA	-7	NA	24076373	24073648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24074195_24076199
transcript_52243.known	chr2	+	1369	11	FSM	ENSG00000219626.9	ENST00000615575.5	1369	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	7.69675256195754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGTCCATCTCTGTAT	0	True	NA	5	True	AATAAA	-20	NA	24123468	24169638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24123534_24124329_24124461_24135118_24135188_24137908_24138101_24139369_24139451_24146747_24146836_24146929_24147087_24161505_24161614_24164197_24164336_24167626_24167684_24169355
transcript_52245.nic	chr2	+	1312	10	NIC	ENSG00000219626.9	novel	1369	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	7.88810637746615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTGTCCATCTCTGTA	-1	True	NA	4	True	AATAAA	-19	NA	24123467	24169637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_24123534_24124329_24124461_24135118_24135188_24137908_24138101_24139369_24139451_24146747_24146836_24146929_24147087_24161505_24161614_24164197_24164336_24169355
transcript_5225.known	chr1	-	750	3	FSM	ENSG00000117500.13	ENST00000370280.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAAGTTTGTTTTATA	882	False	NA	NA	False	TATAAA	-32	NA	93180261	93156039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_93156484_93160128_93160227_93180053
transcript_52256.known	chr2	-	1635	6	FSM	ENSG00000115129.14	ENST00000335934.8	1635	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	32.4616697044376	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	NA	False	NA	-5	True	AATAAA	-14	NA	24085215	24077432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_52257.nic	chr2	-	1169	6	NIC	ENSG00000115129.14	novel	1635	6	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	63.6289242404742	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-8	True	NA	-5	True	AATAAA	-14	NA	24084865	24077432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_24077762_24079443_24079641_24080818_24081032_24083000_24083153_24084188_24084332_24084730
transcript_52259.nnic	chr2	-	1382	6	NNC	ENSG00000115129.14	novel	1635	6	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	67.8745902381738	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-8	True	NA	-5	True	AATAAA	-14	NA	24084865	24077432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_24077859_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_52265.nic	chr2	-	832	4	ISM	ENSG00000115129.14	ENST00000335934.8	1635	6	350	3313	-31	0	5prime_fragment	FALSE	canonical	3	110	junction_3	40.3236903073119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	-8	True	NA	-3	True	AATAAA	-22	NA	24084865	24080745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_24081032_24082884_24083153_24084188_24084332_24084730
transcript_52267.nic	chr2	+	2481	3	ISM	ENSG00000219626.9	ENST00000613899.4	1238	11	15	72170	15	0	5prime_fragment	FALSE	canonical	2	5	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGGGTTGCAATCCT	63	False	NA	NA	False	NA	NA	NA	24076896	24097468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_24076970_24080875_24080956_24095140
transcript_52269.known	chr2	-	677	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	21	True	NA	-3	True	AATAAA	-22	NA	24084311	24080745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24081032_24082884_24083153_24084188
transcript_52270.known	chr2	+	4106	8	FSM	ENSG00000138092.11	ENST00000380834.7	4106	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	55.8898333276076	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTGGTGCTGGTGGTG	-17	True	NA	28	True	AATAAA	-19	NA	24793424	24822376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_52274.known	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	61.7341237956475	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	20	True	NA	25	True	AATAAA	-16	NA	24793461	24822373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_52282.known	chr2	+	1579	5	FSM	ENSG00000138092.11	ENST00000491031.5	1579	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	66.8524494689611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGGGTCAGTAAACAC	270	False	NA	NA	False	NA	NA	NA	24793399	24816571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496
transcript_52285.known	chr2	+	748	4	FSM	ENSG00000138092.11	ENST00000486527.6	748	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	71.8068396618471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTTACTGCTGGCTTG	3	True	NA	NA	False	NA	NA	NA	24793444	24814782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375
transcript_52286.known	chr2	-	1120	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTGTCATTTCA	-1	True	NA	1	True	AATGAA	-18	NA	24793391	24789727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24790582_24793125
transcript_52287.known	chr2	-	624	2	FSM	ENSG00000184924.6	ENST00000474668.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTCTTATTAATAAG	5	True	NA	-4	True	ATTAAA	-16	NA	24793074	24790265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_24790582_24792766
transcript_52288.known	chr2	+	255	2	FSM	ENSG00000224165.7	ENST00000421842.2	348	2	91	2	18	-2	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTCAGTGAATAT	2	True	NA	10	True	AATAAA	-22	NA	24972182	24972830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_24972233_24972625
transcript_52291.known	chr2	-	3589	19	FSM	ENSG00000119772.19	ENST00000380746.8	3589	19	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_17	114.816224603053	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	878	False	NA	-22	True	AATAAA	-18	NA	25252311	25232975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
transcript_52294.known	chr2	-	3585	18	FSM	ENSG00000119772.19	ENST00000683760.1	3585	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_17	102.150543630535	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCACCTGGAGCAAATA	1057	False	NA	-61	True	NA	NA	NA	25252132	25233014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25251911
transcript_52299.known	chr2	-	2300	18	FSM	ENSG00000119772.19	ENST00000402667.1	2300	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_17	69.0315107828943	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGATGGAGAGAAGTAT	878	False	NA	-42	True	AATAAA	-12	NA	25252311	25234196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25252193
transcript_5230.known	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_14	66.96877127834	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	120	False	NA	20	True	AATAAA	-24	NA	93448281	93554661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
transcript_52301.known	chr2	-	2464	20	FSM	ENSG00000138101.20	ENST00000288642.12	2464	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	80.3763998383203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	NA	False	NA	-19	True	AAAAAG	-5	NA	25673647	25377244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_52302.nic	chr2	-	2338	20	NIC	ENSG00000138101.20	novel	2420	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	100.116275889892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	621	False	NA	-17	True	AAAAAG	-7	NA	25672946	25377242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25672779
transcript_52303.known	chr2	-	2420	20	FSM	ENSG00000138101.20	ENST00000407661.7	2420	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.3468287740663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	NA	False	NA	-17	True	AAAAAG	-7	NA	25673634	25377242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_5231.known	chr1	+	5341	14	FSM	ENSG00000137942.18	ENST00000260506.12	5341	14	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_9	42.3036361692006	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTAGTGTGTGATC	2	True	NA	18	True	AATAAA	-22	NA	93448130	93554659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946
transcript_52312.known	chr2	-	8886	12	FSM	ENSG00000143970.18	ENST00000336112.9	8886	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	8.75752333003076	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTTGGAGTT	3	True	NA	-30	True	ATTAAA	-5	NA	25878466	25737691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25744477_25749695_25750414_25753533_25753640_25756017_25756115_25759481_25759646_25767582_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806338_25845480_25845564_25878165
transcript_52315.known	chr2	-	5342	8	FSM	ENSG00000084731.15	ENST00000264712.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	19.9550515316963	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTGCCTTACTTCTCT	-6	True	NA	-12	True	AATAAA	-21	NA	25982497	25926597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
transcript_52317.known	chr2	+	3561	6	FSM	ENSG00000084733.11	ENST00000264710.5	3561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_3	92.2726394983909	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGGTTTGGTTTTCA	-32	True	NA	16	True	TATAAA	-19	NA	26034083	26137454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26034736_26098661_26098723_26109767_26109907_26127143_26127234_26127849_26127952_26134937
transcript_52322.known	chr2	+	1292	5	FSM	ENSG00000084733.11	ENST00000495146.5	1292	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	585.214650790631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTATAAGAATAAAGTT	-9	True	NA	-21	True	ATTAAA	-33	NA	26034106	26135347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26034736_26098661_26098723_26127143_26127234_26127849_26127952_26134937
transcript_52324.nic	chr2	+	1308	3	ISM	ENSG00000084733.11	ENST00000264710.5	3561	6	-9	27101	-9	-24683	5prime_fragment	FALSE	canonical	3	1410	junction_1	49	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAATGTTGTTATTTG	-41	True	NA	NA	False	NA	NA	NA	26034074	26110353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_26034736_26098661_26098723_26109767
transcript_52325.known	chr2	-	2748	21	FSM	ENSG00000084754.12	ENST00000643063.1	2748	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	304.692894567629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGCACCCAGCCAAAC	17	True	NA	-71	True	NA	NA	NA	26244604	26190921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26210694_26210815_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_5233.nic	chr1	+	1328	10	ISM	ENSG00000137942.18	ENST00000260506.12	5341	14	-77	10443	-64	-5098	5prime_fragment	FALSE	canonical	3	521	junction_9	42.3576774564679	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTCCTTTAAGTTTT	-5	True	NA	41	True	NA	NA	NA	93448053	93544216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106
transcript_52330.known	chr2	-	2688	20	FSM	ENSG00000084754.12	ENST00000643233.1	2688	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	232.481709285601	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTCTGTGTCAGCA	-5	True	NA	-38	True	AATAAA	-1	NA	26244626	26190888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_52335.known	chr2	-	2977	19	FSM	ENSG00000084754.12	ENST00000643057.1	2977	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	235.394999002858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCGGGATATTAAACCT	11	True	NA	-56	True	NA	NA	NA	26244610	26190670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_52337.known	chr2	-	2158	19	FSM	ENSG00000084754.12	ENST00000646483.1	2158	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	235.726883448297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTCATGCCTCGCTC	98	False	NA	NA	False	NA	NA	NA	26244596	26191249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26238933_26239005_26239101_26239144_26244529
transcript_52349.known	chr2	+	1997	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	46.4492076239077	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	17	True	NA	24	True	AATAAA	-17	NA	26244938	26290465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_52357.known	chr2	+	2142	15	FSM	ENSG00000138029.14	ENST00000537713.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	120.003571375427	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	0	True	NA	23	True	AATAAA	-16	NA	26244747	26290464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_52361.known	chr2	+	1588	14	FSM	ENSG00000138029.14	ENST00000405867.7	1588	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	123.570261258345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAGATACATAAATATGG	4	True	NA	-29	True	TATAAA	-5	NA	26244925	26290412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_5237.known	chr1	+	3604	23	FSM	ENSG00000117528.14	ENST00000370214.9	3604	23	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_12	14.3190475928723	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGTCTCTTTTTTAA	-11	True	NA	15	True	AATAAA	-18	NA	94418388	94518663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94480463_94480607_94483169_94483240_94487541_94487612_94487693_94487792_94487891_94487984_94489724_94489817_94489902_94489976_94491183_94491248_94498601_94498680_94498782_94498849_94498944_94499035_94499494_94499615_94506537_94506643_94515145_94515203_94517051
transcript_52372.known	chr2	+	670	3	FSM	ENSG00000138029.14	ENST00000479347.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATGAAATGAAAGAGTAA	-2	True	NA	NA	False	AATAGA	-41	NA	26244919	26254956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26244991_26254246_26254319_26254429
transcript_52373.known	chr2	-	2576	19	FSM	ENSG00000084754.12	ENST00000645274.1	2576	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	322.718009383187	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCAGCATCTTTGCC	5	True	NA	-30	True	AATAAA	-9	NA	26244616	26190880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214577_26215052_26215176_26230191_26230295_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_52376.known	chr2	+	2567	2	FSM	ENSG00000286707.1	ENST00000653720.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAAATAATTCCTCCT	NA	False	NA	-11	True	TTTAAA	-30	NA	26298569	26306340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26298627_26303830
transcript_52377.known	chr2	+	8066	10	FSM	ENSG00000138018.19	ENST00000260585.12	8066	10	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_7	14.5983256269721	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	15	True	NA	24	True	AATAAA	-31	NA	26346142	26395885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039_26375149_26383298_26383348_26384958_26385140_26386353_26386537_26389004
transcript_52384.nic	chr2	+	1816	6	ISM	ENSG00000138018.19	ENST00000260585.12	8066	10	-86	19779	-86	2600	5prime_fragment	FALSE	canonical	3	100	junction_3	14.6205335059977	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAATAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	26346056	26376106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039
transcript_52388.known	chr2	+	424	2	FSM	ENSG00000138018.19	ENST00000462301.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTCTTGGGCACGTCAT	12	False	NA	NA	False	NA	NA	NA	26346177	26346900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26346290_26346588
transcript_52389.known	chr2	+	3902	6	FSM	ENSG00000213699.9	ENST00000344420.10	3902	6	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	2.60768096208106	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTTCTGCAGGCTATA	-9	True	NA	30	True	TATAAA	-20	NA	26764283	26781231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041
transcript_52391.nic	chr2	+	722	6	NIC	ENSG00000115163.15	novel	689	5	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	219.193430558491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	6109	False	NA	NA	False	AATAAA	-30	NA	26785949	26801067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811_26793894_26800928
transcript_52392.known	chr2	+	3605	5	FSM	ENSG00000213699.9	ENST00000414029.1	3605	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	9.93415824315276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATCCATTCTCGA	32	True	NA	14	True	AAAAAG	-18	NA	26764324	26781147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26764427_26774250_26774324_26775463_26775677_26776371_26776483_26778041
transcript_52393.known	chr2	+	689	5	FSM	ENSG00000115163.15	ENST00000472719.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	209.72064752904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTGAAAACATCAGAT	-34	True	NA	38	True	NA	NA	NA	26786026	26794076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_52395.known	chr2	+	2978	17	FSM	ENSG00000119777.20	ENST00000238788.14	2978	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	81.2095091414792	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	-10	True	NA	21	True	AATAAA	-21	NA	27032964	27041694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_52396.known	chr2	+	3188	15	FSM	ENSG00000084693.16	ENST00000360131.5	3188	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	137.658572755427	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	11	True	NA	15	True	AATAAA	-16	NA	27051667	27070618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069572_27069707_27070091
transcript_52398.known	chr2	+	2382	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	31.8684797252709	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	21	False	NA	26	True	AATAAA	-18	NA	27051677	27059535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
transcript_52401.known	chr2	+	1850	7	FSM	ENSG00000084693.16	ENST00000489683.5	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	29.3995464817628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTCAAACTGAGAATT	24	False	NA	NA	False	AAAAAG	-23	NA	27051680	27056464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681
transcript_52402.known	chr2	-	442	3	FSM	ENSG00000228474.6	ENST00000456793.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	3781	junction_2	477.5	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-1	True	NA	-1	True	TATAAA	-30	NA	27071654	27070471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27070722_27071325_27071464_27071600
transcript_52403.known	chr2	-	458	3	FSM	ENSG00000228474.6	ENST00000447619.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1888.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	4	True	NA	-1	True	TATAAA	-30	NA	27071649	27070471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27070743_27071325_27071464_27071600
transcript_52404.known	chr2	+	2411	8	FSM	ENSG00000138030.13	ENST00000260599.10	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	62.434945735378	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTACAAGGCTCT	-25	True	NA	19	True	TATAAA	-16	NA	27086746	27100751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27087352_27092331_27092449_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_52405.nnic	chr2	+	1498	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	34	junction_2	59.713203453396	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	-29	True	NA	8	True	AATAAA	-16	NA	27086742	27099969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27087352_27092331_27092449_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_52409.nnic	chr2	+	1389	6	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	90	junction_1	40.5265345175232	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	3080	False	NA	8	True	AATAAA	-16	NA	27086734	27099969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27087352_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_5241.known	chr1	+	884	9	FSM	ENSG00000117528.14	ENST00000315713.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	36.0899483928697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTACTTATTGTTT	6	False	NA	NA	False	AATAAA	-23	NA	94418478	94478723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94478523
transcript_52425.nic	chr2	-	3037	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	10	0	intron_retention	FALSE	canonical	3	125	junction_16	179.26402272556	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	1	True	NA	-1	True	AATAAA	-21	NA	27211783	27199586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211710
transcript_52426.nic	chr2	-	3110	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	-24	0	intron_retention	FALSE	canonical	3	282	junction_16	143.370150310307	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	25	True	NA	-1	True	AATAAA	-21	NA	27211912	27199586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
transcript_52427.nic	chr2	-	3041	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	-38	0	intron_retention	FALSE	canonical	3	301	junction_16	139.102353839718	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	805	False	NA	-1	True	AATAAA	-21	NA	27211976	27199586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
transcript_52428.known	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_16	179.26402272556	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	17	True	NA	-1	True	AATAAA	-21	NA	27212268	27199586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
transcript_5244.known	chr1	-	2298	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	10.1666120217111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACTGCACTTCTTCTC	-3	True	NA	45	True	AATACA	-15	NA	94541759	94529172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_52443.known	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	625.831557920251	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	23	True	NA	49	True	AATAAA	-37	NA	27212369	27217178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_5245.known	chr1	-	1879	5	FSM	ENSG00000117525.14	ENST00000370207.4	1879	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	18.4594149419747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATTCTATCTTCCATT	4	True	NA	-20	True	AATAAA	-25	NA	94541637	94529309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94530597_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_52450.nnic	chr2	-	2273	9	NNC	ENSG00000115194.11	novel	2936	8	NA	NA	-1001	-725	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	38.1903129078566	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCAGCCTGTGTGCTGA	NA	False	NA	-6	True	AATAAA	-17	NA	27265137	27254571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27264009_27264083_27264749
transcript_52451.known	chr2	+	2027	10	FSM	ENSG00000138100.14	ENST00000296098.4	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.5179259164441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTGGTGGCTCTGCCC	33	False	NA	13	True	ATTAAA	-18	NA	27282461	27307439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27299529_27299656_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_52453.known	chr2	+	1930	9	FSM	ENSG00000138100.14	ENST00000380075.7	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	6.74073438135638	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTGCCCTGGTGGCTCT	0	True	NA	9	True	ATTAAA	-14	NA	27282428	27307435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_52457.nnic	chr2	+	1351	8	NIC	ENSG00000138100.14	novel	1930	9	NA	NA	28	-422	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.2027964328661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTATCTCCTTTCGCT	61	False	NA	4	True	AATAAA	-17	NA	27282489	27307013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27282900_27298566_27298740_27299244_27299417_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_52467.known	chr2	-	905	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	153.00366808995	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGGTGCCTCAGTA	10	True	NA	-53	True	NA	NA	NA	27323083	27309539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_52469.known	chr2	-	1002	8	FSM	ENSG00000115204.15	ENST00000380044.6	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_7	77.7741366170696	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-4	True	NA	-5	True	ATTAAA	-15	NA	27323097	27309491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_52470.known	chr2	-	859	8	FSM	ENSG00000115204.15	ENST00000405983.5	859	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	165.219211216801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCCCAGCAAATGCCAC	-27	True	NA	NA	False	CATAAA	-39	NA	27323063	27309645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313155_27322447_27322523_27323051
transcript_52472.known	chr2	-	665	8	FSM	ENSG00000115204.15	ENST00000403262.6	665	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	161.17552860285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGGCACTGAAGATGT	26	False	NA	NA	False	AATAAA	-27	NA	27323067	27311494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27311678_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_52477.nnic	chr2	-	899	7	NIC	ENSG00000115204.15	novel	1002	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_5	162.089224400226	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-17	True	NA	-5	True	ATTAAA	-15	NA	27323110	27309491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27322447_27322523_27323051
transcript_52479.known	chr2	-	896	7	FSM	ENSG00000115204.15	ENST00000621183.4	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_6	82.8440636913043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCCTCAAAGTGGGCAT	-9	True	NA	NA	False	NA	NA	NA	27323102	27309849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_52484.known	chr2	-	906	7	FSM	ENSG00000115204.15	ENST00000402310.5	906	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	168.391821522174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-18	True	NA	-5	True	ATTAAA	-15	NA	27323054	27309491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_52486.known	chr2	-	603	6	FSM	ENSG00000115204.15	ENST00000405076.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	166.017348491054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATACTAGGCACTCCAT	-9	True	NA	NA	False	NA	NA	NA	27323102	27309706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312993_27313110_27322447_27322523_27323051
transcript_52491.known	chr2	-	827	6	FSM	ENSG00000115204.15	ENST00000402722.5	827	6	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_1	202.087505798849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAGTAAATATGTTAT	12	True	NA	-43	True	NA	NA	NA	27323081	27309529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_52495.known	chr2	-	624	4	FSM	ENSG00000115204.15	ENST00000620797.4	624	4	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_3	207.589873441735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	NA	False	NA	-5	True	ATTAAA	-15	NA	27312453	27309491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312405
transcript_52499.known	chr2	-	3882	19	FSM	ENSG00000115207.14	ENST00000264720.7	3882	19	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_18	57.5627676734035	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27	True	NA	-7	True	ATTAAA	-24	NA	27357034	27325848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_52501.known	chr2	-	3992	19	FSM	ENSG00000115207.14	ENST00000359541.6	3992	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	102.515716952193	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	515	False	NA	-7	True	ATTAAA	-24	NA	27356492	27325848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356086
transcript_52507.known	chr2	-	1771	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	15	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	246.92005749412	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGCAACTCTGCTGC	143	False	NA	-12	True	AATAAA	-14	NA	27370300	27364362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367803_27367804_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
transcript_52509.known	chr2	-	1754	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-119	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	249.249215841561	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	9968	False	NA	-1	True	AATAAA	-25	NA	27370457	27364351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369892_27369893_27369920_27370283
transcript_5251.known	chr1	+	2045	15	FSM	ENSG00000143036.17	ENST00000529450.5	2045	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	5.85365749958511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	28	True	NA	13	True	AATAAA	-16	NA	94820400	94895053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867333_94867418_94891129_94891268_94892280_94892518_94894817
transcript_52512.nic	chr2	-	2029	13	NNC	ENSG00000115207.14	novel	604	4	NA	NA	36	2023	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	135.927140409853	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGCTTGTTTTTTGGT	44	False	NA	-7	True	AATAAA	-32	NA	27356963	27333604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_27333648_27333649_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_52517.known	chr2	-	1570	13	FSM	ENSG00000115211.17	ENST00000405940.6	1570	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	197.325168750016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATACTCCCTACCCTC	18	True	NA	-26	True	NA	NA	NA	27370315	27364376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368114_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_5252.known	chr1	+	2381	15	FSM	ENSG00000143036.17	ENST00000271227.11	2381	15	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_6	4.35245649616632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAGCAGAAATCTCT	-16	True	NA	NA	False	AATAAA	-22	NA	94820356	94895246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_52520.known	chr2	-	1608	13	FSM	ENSG00000115211.17	ENST00000445933.6	1608	13	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_10	122.070562471966	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCCATACTCCCTAC	-1	True	NA	-30	True	NA	NA	NA	27370334	27364380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
transcript_52523.known	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_10	99.4915895384574	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-5	True	NA	-1	True	AATAAA	-25	NA	27370338	27364351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_5256.known	chr1	+	1912	14	FSM	ENSG00000143036.17	ENST00000532427.5	1912	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.24926031125843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAACCCTATTCTTC	0	True	NA	-11	True	TTTAAA	-4	NA	94820649	94895029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94820724_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_52565.known	chr2	-	1949	12	FSM	ENSG00000115211.17	ENST00000493344.6	1949	12	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_10	103.894892850085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGAAACACAGGGTTAAT	7	True	NA	-48	True	NA	NA	NA	27370326	27364398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875
transcript_52566.known	chr2	+	2007	16	FSM	ENSG00000115234.11	ENST00000427123.5	2007	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	346.180659322396	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACCTCTGGTTCCCTCT	13	True	NA	16	True	ATTAAA	-16	NA	27370627	27377123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373039_27373114_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_52571.known	chr2	+	2357	15	FSM	ENSG00000115234.11	ENST00000233575.7	2357	15	0	0	0	0	multi-exon	FALSE	canonical	3	955	junction_3	55.1195824308107	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTAGTTCAGGATGAGT	1	True	NA	NA	False	TATAAA	-14	NA	27370615	27377535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_5258.known	chr1	+	2061	14	FSM	ENSG00000143036.17	ENST00000467909.5	2061	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.8985506192864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	17	False	NA	13	True	AATAAA	-16	NA	94820620	94895053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_94820724_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_52586.known	chr2	+	2400	14	FSM	ENSG00000115234.11	ENST00000537606.5	2400	14	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	265.551140618947	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACCTAGTTCAGGATGA	NA	False	NA	NA	False	TATAAA	-12	NA	27370495	27377533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27370807_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_52591.known	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	14.7044966667418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-2	True	NA	-42	True	AATAAA	-16	NA	27380734	27377234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
transcript_52593.known	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	5830	False	NA	-42	True	AATAAA	-16	NA	27380444	27377234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27378372_27378466_27379055_27380092
transcript_52595.known	chr2	+	2174	19	FSM	ENSG00000115216.14	ENST00000379863.7	2174	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	509.815895116639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	-10	True	NA	27	True	AATAAA	-16	NA	27428652	27442255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27435722_27435747_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_52603.known	chr2	+	2176	18	FSM	ENSG00000115216.14	ENST00000379852.8	2176	18	0	0	0	0	multi-exon	TRUE	canonical	3	235	junction_1	290.169679509377	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	5	True	NA	31	True	AATAAA	-20	NA	27428630	27442259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_5261.known	chr1	-	1991	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	3614	junction_1	241.144090166486	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCACAGGCTGATTA	3	True	NA	-6	True	AATAAA	-20	NA	94927110	94896956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
transcript_52624.known	chr2	+	872	7	FSM	ENSG00000157992.12	ENST00000288873.7	872	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_6	134.195131556004	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	-12	True	NA	20	True	AATAAA	-21	NA	27442380	27444297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_52625.nic	chr2	+	880	7	NIC	ENSG00000157992.12	novel	872	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_6	149.323753412956	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	-23	True	NA	20	True	AATAAA	-21	NA	27442369	27444297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_52626.known	chr2	+	956	7	FSM	ENSG00000157992.12	ENST00000543753.5	956	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	189.885052948707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTGGGTCTTAGTTT	-27	True	NA	14	True	ATTAAA	-18	NA	27442365	27446481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27446300
transcript_52627.nic	chr2	+	713	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	199.645085088514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	151	False	NA	20	True	AATAAA	-21	NA	27442354	27444297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_52628.known	chr2	+	665	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	210.084364006463	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	5	True	NA	18	True	AATAAA	-19	NA	27442397	27444295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_52630.nic	chr2	+	1001	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-11	6	4	0	intron_retention	FALSE	canonical	3	286	junction_1	108.706209574246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	-23	True	NA	14	True	AATAAA	-15	NA	27442369	27444291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_52635.nic	chr2	+	968	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-23	0	intron_retention	FALSE	canonical	3	197	junction_5	136.181643403213	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	-21	True	NA	20	True	AATAAA	-21	NA	27442422	27444297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_52636.known	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	155.519002054411	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	2	True	NA	20	True	AATAAA	-21	NA	27442445	27444297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_52639.nic	chr2	+	831	5	ISM	ENSG00000157992.12	ENST00000453171.5	665	6	-43	4	-11	0	intron_retention	FALSE	canonical	3	64	junction_1	203.311337608113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	151	False	NA	14	True	AATAAA	-15	NA	27442354	27444291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_52641.nic	chr2	+	1423	5	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-11	0	4	0	intron_retention	FALSE	canonical	3	286	junction_1	121.39810542179	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	-23	True	NA	20	True	AATAAA	-21	NA	27442369	27444297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397
transcript_52645.nic	chr2	+	1086	5	ISM	ENSG00000157992.12	ENST00000407293.5	942	6	-23	6	-23	0	intron_retention	FALSE	canonical	3	363	junction_1	86.1259978171516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	-21	True	NA	14	True	AATAAA	-15	NA	27442422	27444291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_5265.known	chr1	-	9375	4	FSM	ENSG00000172339.10	ENST00000370205.6	9375	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	10.6144555520604	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTGTTACATATATGA	1	True	NA	NA	False	AATAAA	-20	NA	95072951	94974404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_94983307_95027128_95027261_95064865_95065018_95072762
transcript_52655.known	chr2	-	1612	7	FSM	ENSG00000115226.10	ENST00000264703.4	1612	7	0	0	0	0	multi-exon	TRUE	canonical	3	217	junction_1	25.0715642378638	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTGTATAGTATGCTG	22	True	NA	-4	True	AATAAA	-20	NA	27495200	27491882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27492479_27492665_27492791_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
transcript_52657.known	chr2	+	3531	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	54.4706641637301	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGGTTCATGAATTAT	-15	True	NA	143	True	AATAAA	-25	NA	27583041	27623217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_52660.known	chr2	+	2445	14	FSM	ENSG00000198522.14	ENST00000610189.2	2445	14	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_11	54.1552665897628	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTAATGTTCTATAC	9	True	NA	10	True	AATAAA	-20	NA	27629049	27651511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_52661.known	chr2	+	2544	14	FSM	ENSG00000163798.13	ENST00000618046.4	2544	14	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_11	36.0564974160991	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATATTTTATTTTATT	-10	True	NA	11	True	ATTAAA	-19	NA	27663888	27694972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247_27669388_27675531_27675693_27677294_27677365_27677737_27677925_27682247_27682360_27685036_27685278_27687933_27688021_27688699_27688768_27693684_27693755_27694633
transcript_52662.known	chr2	+	3543	13	FSM	ENSG00000243943.10	ENST00000556601.5	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	54.1515363483705	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	NA	False	NA	141	True	AATAAA	-23	NA	27582968	27623215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27583143_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_52669.nic	chr2	+	1697	12	NIC	ENSG00000198522.14	novel	1832	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	193.191079991882	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTTCTAAGACTGCT	-17	True	NA	44	True	GATAAA	-15	NA	27629023	27650844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_52678.known	chr2	-	4296	6	FSM	ENSG00000119760.16	ENST00000337768.10	4296	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	32.4012345443812	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTCTGATTCATTAAT	4	True	NA	NA	False	ATTAAA	-28	NA	27663614	27650808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661389_27662178_27662282_27663328
transcript_52680.known	chr2	-	2280	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	69.7091098781214	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTTTTCATTTAACTT	-21	True	NA	-21	True	AATATA	-14	NA	27663639	27653062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
transcript_52687.nic	chr2	+	1593	5	ISM	ENSG00000163798.13	ENST00000326019.10	2959	14	-51	25667	-51	-6390	5prime_fragment	FALSE	canonical	3	201	junction_1	35.7517482090037	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAAGAAGCAAT	-7	True	NA	NA	False	AAAACA	-26	NA	27663419	27669302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247
transcript_52688.known	chr2	-	2869	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	17.6405073623181	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTGATTCATTTTT	-22	True	NA	-10	True	AATATA	-25	NA	27663640	27653051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
transcript_52690.known	chr2	-	4114	5	FSM	ENSG00000119760.16	ENST00000404798.6	4114	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	91.1794247623881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATTCTGATTCATT	-8	True	NA	NA	False	ATTAAA	-25	NA	27663840	27650811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27662178_27662282_27663328
transcript_52693.known	chr2	-	560	2	FSM	ENSG00000176714.10	ENST00000522876.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGCCAGAGAAGCTAAC	106	False	NA	NA	False	AATAAA	-8	NA	27628891	27627859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27627918_27628389
transcript_52694.known	chr2	-	2343	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTCCAATGTAACAC	-15	True	NA	0	True	AATAAA	-22	NA	27629012	27625637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27627918_27628949
transcript_5270.known	chr1	+	1294	5	FSM	ENSG00000122481.17	ENST00000495272.5	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	96.5789832209886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	12	True	NA	10	True	ATTAAA	-10	NA	95234220	95247217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_52704.known	chr2	+	587	4	FSM	ENSG00000243147.8	ENST00000476552.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	460.8198008863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATAGCCCTTAAT	202	False	NA	-24	True	NA	NA	NA	27772189	27779697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27772386_27772673_27772693_27774423_27774531_27779432
transcript_5271.nnic	chr1	+	1383	5	NIC	ENSG00000122481.17	novel	1294	5	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	109.714117140868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-7	True	NA	16	True	ATTAAA	-16	NA	95234154	95247223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95239776_95239910_95244210_95244716_95246541_95246658_95246755
transcript_52710.known	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	630	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	-13	True	NA	10	True	AATAAA	-12	NA	27771974	27779731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27772386_27772673_27772693_27779432
transcript_52715.known	chr2	+	508	4	FSM	ENSG00000243147.8	ENST00000296102.8	508	4	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_3	522.099820170647	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	-19	True	NA	12	True	AATAAA	-14	NA	27771718	27779733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27771800_27772673_27772693_27774423_27774531_27779432
transcript_52716.known	chr2	+	404	3	FSM	ENSG00000243147.8	ENST00000379666.7	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_2	412.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTATTGTGTCTTAG	-21	True	NA	13	True	AATAAA	-15	NA	27771716	27779734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27771800_27772673_27772693_27779432
transcript_52717.known	chr2	-	1247	8	FSM	ENSG00000171174.15	ENST00000302188.8	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	3.92272291935599	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTAACCTCAATTGTC	-13	True	NA	84	True	ATTAAA	-33	NA	27890387	27781378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_27781789_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_52719.nic	chr2	-	1231	8	NIC	ENSG00000171174.15	novel	735	4	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	12.4834584428306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGCGAGTCTTTTGT	786	False	NA	NA	False	AATAAA	-37	NA	27890422	27809686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_27810046_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_52721.known	chr2	+	1686	13	FSM	ENSG00000158019.21	ENST00000361704.6	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	89.6222008705928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	26	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_52723.known	chr2	+	1852	13	FSM	ENSG00000158019.21	ENST00000344773.6	1852	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	94.615743345856	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-38	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28327273_28327448_28338449
transcript_52724.known	chr2	+	1681	13	FSM	ENSG00000158019.21	ENST00000342045.6	1681	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	92.9627688318764	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	25	True	NA	21	True	ATTAAA	-27	NA	27890791	28338901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_52725.known	chr2	+	1678	12	FSM	ENSG00000158019.21	ENST00000379624.6	1678	12	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	26.2860928569833	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-38	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_52732.known	chr2	+	4771	9	FSM	ENSG00000213639.10	ENST00000358506.6	4771	9	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	181.855325396316	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	3	True	NA	11	True	ATTAAA	-11	NA	28751747	28802930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_52738.known	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_6	69.9979591539231	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	-3	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_52745.nnic	chr2	-	1863	7	NNC	ENSG00000171103.11	novel	1844	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	89.0012484306946	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-18	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869559
transcript_52746.known	chr2	-	1844	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	39.8148492678576	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-18	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_52748.nic	chr2	-	2229	7	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	-412	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	82.9466026362074	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	28870721	28849820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_28850243_28850327_28850406_28851098_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_5275.nic	chr1	+	1189	4	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_2	110.225022365866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-10	True	NA	16	True	ATTAAA	-16	NA	95234151	95247223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95244210_95244652_95246541_95246658_95246755
transcript_52758.nnic	chr2	-	1741	6	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	100.505920223637	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-18	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28869578
transcript_5276.known	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	66.5482281256734	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	1	True	NA	18	True	ATTAAA	-18	NA	95234209	95247225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
transcript_52761.known	chr2	-	1584	6	FSM	ENSG00000171103.11	ENST00000439947.1	1584	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	95.8073066107173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCATTTTAAGATAAAT	-4	True	NA	NA	False	AATAAA	-1	NA	28870295	28849839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_28850243_28850327_28850406_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_52769.nnic	chr2	-	1550	5	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	109.135237205955	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-18	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28869578
transcript_5277.nnic	chr1	+	1253	4	NIC	ENSG00000122481.17	novel	1180	4	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	116.522768399809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-10	True	NA	16	True	ATTAAA	-16	NA	95234151	95247223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95244210_95244716_95246541_95246658_95246755
transcript_52776.nnic	chr2	+	2282	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	15	-611	intron_retention	FALSE	canonical	0	0	junction_1	377.857115852011	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	12	True	NA	21	True	AGTAAA	-15	NA	28751844	28801037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_52777.nnic	chr2	+	2898	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	15	5	intron_retention	FALSE	canonical	0	0	junction_1	377.857115852011	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGTAATTCCAGTGT	12	True	NA	21	True	AATAAA	-26	NA	28751844	28801653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_52782.known	chr2	+	3506	18	FSM	ENSG00000163811.12	ENST00000407426.8	3506	18	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_7	54.0044211954032	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTGTGGTATAT	-13	True	NA	18	True	AATAAA	-17	NA	28894666	28948219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520_28935608_28936921_28936954_28937930_28937995_28941460_28941575_28942311_28942382_28946449_28946500_28946599
transcript_5279.nnic	chr1	+	751	3	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	87.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-13	True	NA	16	True	ATTAAA	-16	NA	95234148	95247223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95246541_95246658_95246755
transcript_52791.nic	chr2	+	1402	11	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-14	18590	-14	3144	5prime_fragment	FALSE	canonical	3	453	junction_7	52.4724689718332	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGACCTCCAGAC	35	False	NA	NA	False	NA	NA	NA	28894652	28929629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578
transcript_52797.known	chr2	+	2560	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	159.690912390154	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	NA	False	NA	22	True	AATAAA	-18	NA	30146940	30160533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
transcript_5280.nnic	chr1	+	1120	3	NIC	ENSG00000122481.17	novel	1078	3	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	79	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-10	True	NA	16	True	ATTAAA	-16	NA	95234151	95247223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_95234316_95244210_95244699_95246755
transcript_52800.known	chr2	+	2197	4	FSM	ENSG00000119801.13	ENST00000402003.7	2197	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	174.25460299994	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	3	True	NA	22	True	AATAAA	-18	NA	30147006	30160533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30148244_30148306_30156627_30156793_30158618
transcript_52803.known	chr2	+	2499	4	FSM	ENSG00000119801.13	ENST00000379519.7	2499	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	160.787644633121	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	NA	False	NA	22	True	AATAAA	-18	NA	30146940	30160533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30148244_30148542_30156627_30156793_30158618
transcript_52807.known	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	43.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	3	True	NA	22	True	AATAAA	-18	NA	30147006	30160533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30147063_30156627_30156793_30158618
transcript_52809.known	chr2	+	653	3	FSM	ENSG00000119801.13	ENST00000470120.5	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	197.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGATGGAACCTTTCT	90	False	NA	NA	False	AATGAA	-24	NA	30147951	30158966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30148092_30156627_30156793_30158618
transcript_5281.known	chr1	+	1078	3	FSM	ENSG00000122481.17	ENST00000263893.10	1078	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	97.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	2	True	NA	16	True	ATTAAA	-16	NA	95234210	95247223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95244210_95244716_95246755
transcript_52810.known	chr2	+	2930	3	FSM	ENSG00000213626.13	ENST00000395323.9	2930	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	19.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTCTGGTTTCCTTTT	0	True	NA	19	True	AATAAA	-19	NA	30231533	30260028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30231765_30234404_30234508_30257432
transcript_52812.known	chr2	+	485	3	FSM	ENSG00000213626.13	ENST00000401506.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	133.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGTTGGTTTTCTTTTC	-17	True	NA	NA	False	NA	NA	NA	30232152	30257760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30232207_30234404_30234508_30257432
transcript_52813.known	chr2	+	756	3	FSM	ENSG00000213626.13	ENST00000407930.2	756	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	131.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTTTCCCATCATGA	10	True	NA	NA	False	NA	NA	NA	30232179	30257670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30232595_30234404_30234508_30257432
transcript_52814.nic	chr2	+	1533	2	ISM	ENSG00000213626.13	ENST00000464412.5	494	3	-4	20996	-1	-20996	5prime_fragment	FALSE	canonical	3	231	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATAGAAAGCCAGGGAG	-1	True	NA	NA	False	ATTAAA	-13	NA	30231532	30235705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_30231765_30234404
transcript_52815.known	chr2	+	4879	6	FSM	ENSG00000172954.14	ENST00000379509.8	4879	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	14.2211110677049	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	10	True	NA	NA	False	AATAAA	-21	NA	30447245	30644225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
transcript_52817.known	chr2	-	2683	23	FSM	ENSG00000162949.16	ENST00000295055.12	2683	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	5.43709329247479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTCATTCATATTCTG	-15	True	NA	-12	True	AATAAA	-17	NA	30807446	30722770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_30723237_30730729_30730787_30731343_30731400_30732437_30732567_30734448_30734525_30736502_30736572_30738234_30738294_30738399_30738458_30741907_30741965_30742325_30742360_30743382_30743580_30745722_30745735_30751102_30751252_30753052_30753199_30754289_30754365_30758045_30758138_30763081_30763157_30764131_30764307_30770312_30770450_30775929_30776046_30777566_30777640_30787127_30787358_30807301
transcript_52818.nic	chr2	-	2195	15	ISM	ENSG00000162949.16	ENST00000295055.12	2683	23	-12	18667	-12	-64	5prime_fragment	FALSE	canonical	1	3	junction_4	6.46813224152673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTGACTTGTCAGAATA	NA	False	NA	NA	False	AATAAA	-14	NA	30807458	30741437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_30741965_30742325_30742360_30743382_30743580_30745722_30745735_30751102_30751252_30753052_30753199_30754289_30754365_30758045_30758138_30763081_30763157_30764131_30764307_30770312_30770450_30775929_30776046_30777566_30777640_30787127_30787358_30807301
transcript_52820.nic	chr2	-	1699	13	ISM	ENSG00000162949.16	ENST00000295055.12	2683	23	-12	20547	-12	-174	5prime_fragment	FALSE	canonical	1	3	junction_2	6.54630939283095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGGCAGTTCTCTGTGC	NA	False	NA	-2	True	TATAAA	-15	NA	30807458	30743317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_30743580_30745722_30745735_30751102_30751252_30753052_30753199_30754289_30754365_30758045_30758138_30763081_30763157_30764131_30764307_30770312_30770450_30775929_30776046_30777566_30777640_30787127_30787358_30807301
transcript_52821.known	chr2	-	2447	15	FSM	ENSG00000158089.15	ENST00000349752.10	2447	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	7.56097661330458	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	16	True	NA	-1	True	AATAAA	-26	NA	31138440	30910466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
transcript_52823.nic	chr2	-	1832	12	NIC	ENSG00000158089.15	novel	2447	15	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	13.198422144614	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	-14	True	NA	-1	True	AATAAA	-26	NA	31138102	30910466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
transcript_52825.nnic	chr2	-	1635	10	NNC	ENSG00000162959.14	novel	1516	10	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	102.879409210523	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	682	False	NA	NA	False	AATAAA	-19	NA	32010330	31867822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_31950597_31950718_32010186
transcript_52826.nnic	chr2	-	1520	10	NNC	ENSG00000162959.14	novel	1516	10	NA	NA	125	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.5254169601369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-19	True	NA	NA	False	AATAAA	-19	NA	32010883	31867822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010812
transcript_52827.known	chr2	-	1516	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	75.3384134635836	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	4	True	NA	NA	False	AATAAA	-19	NA	32011008	31867822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
transcript_52829.known	chr2	-	4505	9	FSM	ENSG00000162959.14	ENST00000295065.9	4505	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	33.7814668124402	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGCTTCTTTATTAT	455	False	NA	NA	False	TATAAA	-22	NA	32010557	31865059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_52834.known	chr2	-	1336	8	FSM	ENSG00000162959.14	ENST00000426310.6	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	81.5535381932429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGGTGGAAGCTT	637	False	NA	NA	False	NA	NA	NA	32010375	31867977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31943301_31943384_32010186
transcript_52837.nic	chr2	-	1514	8	NIC	ENSG00000162959.14	novel	1516	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	80.85689045897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	606	False	NA	NA	False	AATAAA	-19	NA	32010406	31867822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_31868493_31869847_31869953_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_5284.nic	chr1	+	3177	2	ISM	ENSG00000122481.17	ENST00000263893.10	1078	3	-59	0	-58	0	intron_retention	FALSE	canonical	3	202	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-10	True	NA	16	True	ATTAAA	-16	NA	95234151	95247223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_95234316_95244210
transcript_52844.known	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	832.50498830671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	52	False	NA	-10	True	AATAAA	-11	NA	32039754	32011885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_52848.known	chr2	-	523	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	799.450961598021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAATTCATA	13	True	NA	-31	True	NA	NA	NA	32039793	32011906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_5285.known	chr1	+	513	2	FSM	ENSG00000122481.17	ENST00000473397.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTTTTCATGTTT	59	False	NA	13	True	ATTAAA	-13	NA	95234267	95247220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_95234316_95246755
transcript_52858.known	chr2	-	631	5	FSM	ENSG00000162961.14	ENST00000295066.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	714.788561394207	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTGGATGTATAAGA	1	True	NA	-148	True	NA	NA	NA	32039805	32024101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039592
transcript_5286.known	chr1	-	747	1	FSM	ENSG00000137970.7	ENST00000468715.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTATTT	17	False	NA	NA	False	AATGAA	-5	NA	96679620	96678873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_96678900_96679600
transcript_52860.known	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1437	junction_4	158.368241765829	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	1	True	NA	-12	True	AATAAA	-15	NA	32039805	32023904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_52866.known	chr2	-	712	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGTAGCACGTGTG	-10	True	NA	NA	False	ATTAAA	-16	NA	32165757	32165045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_32165000_32165800
transcript_52868.known	chr2	+	5089	14	FSM	ENSG00000152683.14	ENST00000282587.9	5089	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	17.3832538609116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGGCATCCTTTTG	-1	True	NA	16	True	ATTAAA	-19	NA	32165863	32224379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_5287.known	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	32.2642565158522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_5288.known	chr1	+	3054	14	FSM	ENSG00000117569.19	ENST00000370198.5	3054	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	31.4578707660912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_52883.known	chr2	+	4776	13	FSM	ENSG00000152683.14	ENST00000435660.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	36.1435217800738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTTTCTTTATTCAG	NA	False	NA	39	True	ATTAAA	-32	NA	32165840	32224112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32220212
transcript_52886.known	chr2	+	11955	6	FSM	ENSG00000119820.11	ENST00000238831.9	11955	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	31.7653899708472	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATTAATTTGTCTTTT	-16	True	NA	4	True	AATAAA	-16	NA	32277903	32316594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32278235_32290482_32290637_32292176_32292349_32298233_32298312_32301381_32301496_32305488
transcript_52888.known	chr2	+	15703	74	FSM	ENSG00000115760.15	ENST00000421745.7	15687	74	5	-21	5	21	multi-exon	TRUE	canonical	3	10	junction_32	37.2043748701204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGCCATGGTGTGAA	-1	True	NA	28	True	AATAAA	-38	NA	32357027	32618899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32435495_32435586_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453943_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471125_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32524887_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447_32611583_32617724
transcript_52889.known	chr2	+	11526	58	FSM	ENSG00000115760.15	ENST00000648282.1	11526	58	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_56	23.1183607257731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAATTAGTGAACAAAAA	84	False	NA	NA	False	NA	NA	NA	32357324	32524908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453955_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471152_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32521661_32521758_32524887
transcript_5289.known	chr1	+	12014	14	FSM	ENSG00000117569.19	ENST00000609116.5	12014	14	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_13	22.3715267047332	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTTTCTTGA	-2	True	NA	15	True	ATTAAA	-15	NA	96721782	96823738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_52890.known	chr2	+	2888	20	FSM	ENSG00000018699.13	ENST00000317907.9	2888	20	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_17	24.3927921782093	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	6	True	NA	10	True	AATAAA	-18	NA	32628049	32821051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_52893.nnic	chr2	+	2807	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_13	36.1067091334068	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	-12	True	NA	10	True	AATAAA	-18	NA	32628031	32821051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_52894.nnic	chr2	+	2709	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	37.52628708282	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	10	True	NA	10	True	AATAAA	-18	NA	32628105	32821051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_52898.known	chr2	-	2751	8	FSM	ENSG00000119812.20	ENST00000238823.13	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_3	73.7635494298491	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-9	True	NA	-17	True	AATAAA	-18	NA	33599299	33583659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
transcript_529.known	chr1	+	431	5	FSM	ENSG00000171735.19	ENST00000461311.1	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_4	2050.1628441419	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTTAAGACAGTTCT	12	False	NA	NA	False	NA	NA	NA	6785551	6887787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756_6871841_6887653
transcript_5290.known	chr1	+	3321	14	FSM	ENSG00000117569.19	ENST00000674951.1	3321	14	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_13	20.9510559533912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGCTGGTTTTTTTTAA	-1	True	NA	NA	False	AATAAA	-20	NA	96721783	96815049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_52902.known	chr2	-	655	3	ISM	ENSG00000119812.20	ENST00000689713.1	2482	9	-35	8237	-35	-6309	5prime_fragment	FALSE	canonical	3	756	junction_1	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGACGTGTGCACTGG	NA	False	NA	NA	False	AATAAA	-30	NA	33599382	33591922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_33592215_33595488_33595638_33599168
transcript_52906.known	chr2	-	1993	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	7.49149177264394	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	0	True	NA	-20	True	AATAAA	-19	NA	36598168	36552257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_52909.known	chr2	-	6937	36	FSM	ENSG00000008869.12	ENST00000233099.6	6937	36	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_28	12.018013690341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATGTTTAAATGTAAT	-26	True	NA	NA	False	ATTAAA	-20	NA	37084372	36980894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_36981795_36988645_36988860_36990647_36990800_37000585_37000814_37002305_37002573_37003541_37003687_37005631_37005760_37007049_37007305_37008610_37008849_37013840_37014021_37019808_37019878_37020654_37020837_37027922_37028175_37028680_37028921_37032628_37032774_37037854_37038025_37040328_37040519_37041132_37041293_37049652_37049844_37053501_37053608_37056439_37056616_37057316_37057481_37058450_37058561_37058887_37058988_37060580_37060734_37061938_37062051_37064739_37064991_37065754_37065911_37068680_37068931_37070229_37070388_37072109_37072282_37075484_37075635_37076910_37077020_37079119_37079332_37083288_37083437_37084268
transcript_52912.nic	chr2	-	1457	2	ISM	ENSG00000008869.12	ENST00000233099.6	6937	36	14	101175	14	-9858	5prime_fragment	FALSE	canonical	3	66	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	-12	True	NA	NA	False	NA	NA	NA	37084358	37082069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_37083437_37084268
transcript_52914.known	chr2	-	10103	17	FSM	ENSG00000055332.19	ENST00000681507.1	10103	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_16	26.7738649385926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	NA	False	NA	0	True	AATAAA	-20	NA	37157192	37099209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148940_37156907
transcript_52915.known	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_16	17.9964189146063	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-14	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_52921.known	chr2	+	3839	9	FSM	ENSG00000152133.16	ENST00000674370.2	3839	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	2.02715934252836	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	-8	True	NA	44	True	AATAAA	-19	NA	37084517	37099244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_52924.nic	chr2	+	781	7	ISM	ENSG00000152133.16	ENST00000409774.6	3905	9	-42	5096	-42	-177	5prime_fragment	FALSE	canonical	3	43	junction_5	2.26691175145591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAGAACAGGATGA	NA	False	NA	21	True	NA	NA	NA	37084408	37094147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081
transcript_52925.known	chr2	+	3570	7	FSM	ENSG00000152133.16	ENST00000281932.6	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.3873904186821	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	-8	True	NA	44	True	AATAAA	-19	NA	37084517	37099244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37084571_37088368_37088441_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_52928.known	chr2	-	3346	16	FSM	ENSG00000115816.15	ENST00000234170.10	3346	16	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_12	66.4989891318323	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGAAGCATTGTTA	353	False	37231614	-45	True	AATAAA	-31	NA	37231596	37201611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_5294.nic	chr1	+	1875	8	ISM	ENSG00000117569.19	ENST00000476419.5	1691	13	-38	27344	0	14669	5prime_fragment	FALSE	canonical	3	105	junction_7	12.3023143666348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATAATTAAGTAGTTAT	-1	True	NA	NA	False	AAGAAA	-4	NA	96721783	96786144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058
transcript_52940.nic	chr2	-	2978	13	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-64	9386	-64	-9214	5prime_fragment	FALSE	canonical	3	1227	junction_9	69.8579908735492	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAATACATTTAATAT	289	False	NA	NA	False	NA	NA	NA	37231660	37210997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_52942.nic	chr2	-	2696	11	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-64	10723	-64	-10551	5prime_fragment	FALSE	canonical	3	1227	junction_7	69.6631897058985	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATACTTCTATCTTCT	289	False	NA	NA	False	NA	NA	NA	37231660	37212334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_52946.nnic	chr2	+	967	6	NNC	ENSG00000218739.10	novel	3152	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.3263215212	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	-5	True	NA	22	True	AATAAA	-33	NA	37196484	37204743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862_37202365_37204560
transcript_52948.known	chr2	+	3152	5	FSM	ENSG00000218739.10	ENST00000402297.6	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	31.2439994238894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	6	True	NA	22	True	AATAAA	-33	NA	37196495	37204743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862
transcript_5295.known	chr1	+	1129	5	FSM	ENSG00000117569.19	ENST00000460706.5	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	8.04285397107271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATGGAAAACTGTTCC	7	True	NA	NA	False	AATAAA	-2	NA	96721791	96771475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707
transcript_52954.known	chr2	+	695	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	70.8003354511827	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	18	False	NA	18	True	AATAAA	-29	NA	37196507	37204739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
transcript_52957.nic	chr2	-	512	2	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-13	27111	-13	-115	5prime_fragment	FALSE	canonical	3	1431	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGTAAAGAAAGATAAAC	5	True	NA	NA	False	NA	NA	NA	37231609	37228722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_37229037_37231411
transcript_52958.nic	chr2	-	441	2	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-64	27233	-64	-237	5prime_fragment	FALSE	canonical	3	1431	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGTAAAAATACCTAAAAT	289	False	NA	NA	False	AAAAAG	-18	NA	37231660	37228844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_37229037_37231411
transcript_5296.known	chr1	+	3153	14	FSM	ENSG00000117569.19	ENST00000426398.3	3153	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.6326960889425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACACTTCTGTAGCT	3	True	NA	-16	True	NA	NA	NA	96721787	96814858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_96721897_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_52960.known	chr2	-	6156	19	FSM	ENSG00000115825.11	ENST00000234179.8	6156	19	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_17	46.2805454687916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	0	True	NA	16	True	AATAAA	-31	NA	37324833	37250501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37324680
transcript_52963.nic	chr2	-	2775	18	NIC	ENSG00000115825.11	novel	6156	19	NA	NA	0	-2438	combination_of_known_junctions	FALSE	canonical	3	87	junction_17	61.0906071645799	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTTTTGTATTTTTT	0	True	NA	-12	True	TATAAA	-19	NA	37324833	37252939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37324680
transcript_5297.known	chr1	-	4423	23	FSM	ENSG00000188641.14	ENST00000370192.8	4423	23	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_15	4.07775663491015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTTTTGCTGCCTCA	26	False	97921046	0	True	AATAAA	-21	NA	97921034	97077742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_97079147_97082329_97082471_97098488_97098633_97193068_97193249_97234851_97234995_97305258_97305379_97306176_97306298_97373560_97373645_97382392_97382462_97450058_97450224_97515725_97515942_97549559_97549745_97573759_97573971_97593217_97593388_97595058_97595167_97679094_97679183_97691716_97691799_97699350_97699548_97721509_97721672_97740391_97740480_97828113_97828197_97883263_97883375_97920883
transcript_5298.known	chr1	-	1779	6	FSM	ENSG00000188641.14	ENST00000306031.5	1779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.4027022093287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCTTTTTGTCCTTTT	-3	True	NA	NA	False	ATTAAA	-24	NA	97921049	97719757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_97720927_97721509_97721672_97740391_97740480_97828113_97828197_97883263_97883375_97920883
transcript_52981.nic	chr2	+	1329	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_5	103.11805532172	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	NA	False	NA	6	True	AATAAA	-19	NA	37231618	37248420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_52982.nic	chr2	+	2069	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_5	103.11805532172	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	37231618	37249160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_52985.known	chr2	+	2184	10	FSM	ENSG00000003509.16	ENST00000002125.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	71.6324638452651	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	-19	True	NA	NA	False	AATAAA	-25	NA	37231657	37249160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241792_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_53.known	ERCC-00154	+	521	1	FSM	ERCC-00154A	DQ854997	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00154_+_0_500
transcript_53000.nic	chr2	+	1270	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	127.618572316101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	NA	False	NA	6	True	AATAAA	-19	NA	37231618	37248420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_53001.nic	chr2	+	2010	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	127.618572316101	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	37231618	37249160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_53005.nic	chr2	+	2326	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	307	junction_5	41.9702275428666	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	NA	False	NA	6	True	AATAAA	-19	NA	37231618	37248420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_53007.known	chr2	+	2974	9	FSM	ENSG00000003509.16	ENST00000474154.5	2974	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	131.176348382626	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	-14	True	NA	NA	False	AATAAA	-25	NA	37231662	37249160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243910_37243974_37246051_37246196_37247455_37247630_37248134
transcript_5302.nic	chr1	+	1779	10	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	174.401056175305	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	41	False	NA	13	True	AATAAA	-15	NA	98661797	98760500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_53020.nic	chr2	+	1549	4	ISM	ENSG00000003509.16	ENST00000455230.5	946	9	-12	8655	-12	-2707	5prime_fragment	FALSE	canonical	3	402	junction_3	18.263503375737	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAGTCACATTGGTAGT	NA	False	NA	NA	False	CATAAA	-45	NA	37231618	37238921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756
transcript_53025.known	chr2	+	1683	7	FSM	ENSG00000115828.17	ENST00000338415.8	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	5.46707315561891	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCTTTTTTAT	0	True	NA	NA	False	ATTAAA	-18	NA	37344629	37373322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37344852_37352788_37352936_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_53026.known	chr2	+	992	6	FSM	ENSG00000115828.17	ENST00000404976.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.7384541014893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGAAGAAAATTTGGATG	1770	False	NA	NA	False	NA	NA	NA	37344593	37372742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37344852_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_53027.known	chr2	+	1893	11	FSM	ENSG00000115841.21	ENST00000354545.8	1893	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	4.07553677446297	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTTCACTCGTGTCCA	7	True	NA	4	True	AATAAA	-31	NA	37925286	38017744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_37925426_37929261_37929730_37974039_37974215_37975211_37975315_37981282_37981344_37989540_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185
transcript_53028.known	chr2	-	5218	3	FSM	ENSG00000138061.12	ENST00000610745.5	5218	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGTCCATTCTA	0	True	NA	89	True	ATTAAA	-16	NA	38076151	38067508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38071311_38074345_38075390_38075779
transcript_53030.known	chr2	-	2199	13	FSM	ENSG00000119787.14	ENST00000452935.6	2199	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	127.671534937641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAACTGTAGAAGTAGT	1470	False	NA	-12	True	AATAAA	-17	NA	38376594	38295907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38376115
transcript_53031.known	chr2	-	3805	13	FSM	ENSG00000119787.14	ENST00000378954.9	3805	13	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_1	59.3129061278684	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTAGACCATTGGCT	5	True	NA	NA	False	ATTAAA	-24	NA	38377273	38293953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_53033.known	chr2	-	2335	13	FSM	ENSG00000119787.14	ENST00000419554.6	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.93657464507	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	5	True	NA	-5	True	AATAAA	-24	NA	38377273	38295900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38296591_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_53038.known	chr2	-	1600	12	FSM	ENSG00000119787.14	ENST00000651368.1	1600	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	127.341215338817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	16	True	NA	-7	True	AATAAA	-22	NA	38377262	38295902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
transcript_5304.known	chr1	+	1736	9	FSM	ENSG00000162627.17	ENST00000306121.8	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_7	38.4407010862185	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	-1	True	NA	13	True	AATAAA	-15	NA	98661720	98760500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_53045.nic	chr2	-	2345	9	NIC	ENSG00000119787.14	novel	1905	12	NA	NA	-5	269	combination_of_known_junctions	FALSE	canonical	2	28	junction_8	137.237704367277	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTGTGATTCTTTTT	-12	True	NA	NA	False	ATTAAA	-21	NA	38377290	38294884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314655_38377142
transcript_5305.known	chr1	+	1562	9	FSM	ENSG00000162627.17	ENST00000528824.1	1562	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	199.140496885993	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	18	True	NA	13	True	AATAAA	-15	NA	98661861	98760500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_53052.known	chr2	-	2779	14	FSM	ENSG00000143889.16	ENST00000358367.8	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	138.53788493452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	5	True	NA	-2	True	ATTAAA	-18	NA	38603036	38563185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_53058.known	chr2	-	1687	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	264.603739370571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGCTGCATTGTTTA	-12	True	NA	-2	True	AATAAA	-16	NA	38602929	38581074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_5306.nic	chr1	+	1547	8	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	138.895350416589	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	0	True	NA	13	True	AATAAA	-15	NA	98661756	98760500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_53062.known	chr2	+	2277	7	FSM	ENSG00000143891.17	ENST00000272252.10	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	15.6035964515307	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTGTTCCTTTACTC	18	True	NA	8	True	AATAAA	-20	NA	38666113	38734765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555_38729698_38731734_38731910_38733487
transcript_53067.nic	chr2	+	1593	5	ISM	ENSG00000143891.17	ENST00000272252.10	2277	7	-205	4504	-172	-1541	5prime_fragment	FALSE	canonical	3	161	junction_3	11.2333209693305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTGTGTGTGTGCGTG	-7	True	NA	11	True	AATAAA	-16	NA	38665908	38730261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555
transcript_5307.known	chr1	+	1589	8	FSM	ENSG00000162627.17	ENST00000529992.5	1589	8	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	162.733662460965	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTGGCTGCAGTGTA	14	True	NA	11	True	AATAAA	-13	NA	98661700	98760498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_53077.known	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	691.848337751114	2481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	1	True	NA	29	True	AATAAA	-16	NA	38751358	38744892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_53078.known	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	195.45218227371	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	7	True	NA	4	True	NA	NA	NA	38751352	38744917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
transcript_53079.known	chr2	+	834	4	FSM	ENSG00000152147.11	ENST00000409566.1	834	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	139.538127007958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTTTAAATGTAAATG	-6	True	NA	-8	True	AAAAAG	-21	NA	38778209	38781947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38778282_38778971_38779119_38779257_38779442_38781516
transcript_5308.nic	chr1	+	1028	5	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-274	59464	-274	-12041	5prime_fragment	FALSE	canonical	3	181	junction_1	22.9387772123974	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	-10	True	NA	9	True	ATTAAA	-18	NA	99850086	99864556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_53080.known	chr2	+	3705	3	FSM	ENSG00000152147.11	ENST00000281950.8	3705	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	13.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATTTTTTGTCTCCT	-6	True	NA	16	True	AATAAA	-19	NA	38778209	38785002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38778282_38778971_38779119_38781516
transcript_53082.known	chr2	-	4885	24	FSM	ENSG00000163214.21	ENST00000457308.6	4885	24	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_15	15.2476717364896	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	-27	True	NA	-5	True	ATTAAA	-17	NA	38875934	38797728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_38798443_38802714_38802916_38806558_38806694_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053_38854179_38855056_38855253_38856339_38856462_38858660_38858837_38860998_38861838_38862144_38862334_38863360_38863520_38868181_38868412_38875786
transcript_53085.known	chr2	+	648	5	FSM	ENSG00000188010.16	ENST00000409665.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	83.7447759564738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	7	True	NA	4	True	AATAAA	-16	NA	38876010	38882647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38876111_38880178_38880230_38880581_38880707_38881441_38881579_38882412
transcript_53086.known	chr2	+	706	5	FSM	ENSG00000188010.16	ENST00000644631.4	727	5	21	0	6	0	multi-exon	FALSE	canonical	3	179	junction_4	21.242645786248	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTCTGCTTATTATAAT	-7	True	NA	19	True	AATAAA	-14	NA	38875996	38882709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38876111_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_53088.nnic	chr2	+	722	5	NNC	ENSG00000188010.16	novel	750	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	84.9308542286017	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	1	True	NA	4	True	AATAAA	-16	NA	38876004	38882647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_38876197_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_5309.nic	chr1	+	973	5	ISM	ENSG00000162688.17	ENST00000294724.8	7446	34	136	59464	136	-12041	5prime_fragment	FALSE	canonical	3	27	junction_1	85.2272696969696	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	-11	True	NA	9	True	ATTAAA	-18	NA	99850624	99864556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_99850899_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_53090.known	chr2	+	750	5	FSM	ENSG00000188010.16	ENST00000410014.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.658332954511	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAACTTTATA	-13	True	NA	3	True	AATAAA	-15	NA	38875990	38882646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_38876212_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_53093.known	chr2	+	3990	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	19.5897932607774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-8	True	AATAAA	-8	NA	39437226	39602628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
transcript_53094.known	chr2	+	1086	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	5	0	1	0	multi-exon	FALSE	canonical	3	28	junction_3	17.5182444579612	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAGCTCACACCTG	-4	True	NA	NA	False	TTTAAA	-20	NA	39437424	39475339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
transcript_53095.nic	chr2	+	1371	4	NIC	ENSG00000152154.11	novel	569	3	NA	NA	202	0	intron_retention	FALSE	canonical	2	6	junction_1	15.5777619273972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	-5	True	NA	19	True	ATTAAA	-19	NA	39665183	39717963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_39665349_39704080_39704195_39707048_39707187_39717009
transcript_53096.known	chr2	+	1664	4	FSM	ENSG00000152154.11	ENST00000281961.3	1664	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	13.2245562832516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	-24	True	NA	19	True	ATTAAA	-19	NA	39665916	39717963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_39666375_39704080_39704195_39707048_39707187_39717009
transcript_53097.nic	chr2	+	1233	3	NIC	ENSG00000152154.11	novel	569	3	NA	NA	202	0	intron_retention	FALSE	canonical	2	6	junction_1	15.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	-5	True	NA	19	True	ATTAAA	-19	NA	39665183	39717963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_39665349_39704080_39704195_39717009
transcript_53104.known	chr2	-	2089	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	61.4748729156881	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-18	True	NA	-2	True	ATTAAA	-19	NA	39779267	39736306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_53105.nic	chr2	-	2086	11	NIC	ENSG00000138050.15	novel	2089	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	73.0859767670926	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-25	True	NA	-2	True	ATTAAA	-19	NA	39779274	39736306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771514_39771641_39779113
transcript_53108.known	chr2	-	2205	10	FSM	ENSG00000138050.15	ENST00000505747.6	2205	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_8	20.4613456709637	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCTGGTTTAATGT	-9	True	NA	NA	False	AAAAAG	-22	NA	39779258	39736060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_53109.nic	chr2	-	1965	10	NIC	ENSG00000138050.15	novel	2089	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	54.0379382048584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-25	True	NA	-2	True	ATTAAA	-19	NA	39779274	39736306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771514_39771641_39779113
transcript_5311.nnic	chr1	+	2707	11	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	116	junction_7	191.11904666987	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	-10	True	NA	29	True	AATAAA	-34	NA	100038094	100083377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_53119.known	chr2	+	2490	7	FSM	ENSG00000162878.13	ENST00000294964.6	2490	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_2	25.1263473933903	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	-2	True	NA	31	True	AATAAA	-37	NA	42048020	42058517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
transcript_53122.known	chr2	+	1447	3	FSM	ENSG00000162878.13	ENST00000490302.1	1447	3	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAATAAAATAAAATT	866	False	NA	-17	True	NA	NA	NA	42054930	42058469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42055021_42055285_42055394_42057220
transcript_53123.known	chr2	+	5546	23	FSM	ENSG00000143924.19	ENST00000318522.10	5546	23	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	101.462772556618	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTTAACTCTTTCTT	-25	True	NA	31	True	AATAAA	-27	NA	42169352	42332548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120_42261295_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_53128.known	chr2	+	962	4	FSM	ENSG00000143924.19	ENST00000409040.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	146.876365241882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTTATAAACAATCT	3	True	NA	NA	False	NA	NA	NA	42169380	42261513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120
transcript_53129.nic	chr2	+	597	3	ISM	ENSG00000143924.19	ENST00000409040.1	962	4	-28	4883	0	-4883	5prime_fragment	FALSE	canonical	3	679	junction_1	66.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCATTTATGAAAGGGG	-25	True	NA	NA	False	AAGAAA	-23	NA	42169352	42256630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_42169637_42245504_42245688_42256500
transcript_53130.nic	chr2	+	1818	3	ISM	ENSG00000143924.19	ENST00000409040.1	962	4	-28	3662	0	-3662	5prime_fragment	FALSE	canonical	3	679	junction_1	66.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCCTTCTGGAACTCAA	-25	True	NA	NA	False	NA	NA	NA	42169352	42257851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_42169637_42245504_42245688_42256500
transcript_53131.known	chr2	+	3568	22	FSM	ENSG00000143924.19	ENST00000402711.6	3568	22	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	127.280182659985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCCTTCTTTAAAA	-25	True	NA	22	True	AAGAAA	-24	NA	42169352	42330744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_53139.nic	chr2	+	1802	14	ISM	ENSG00000057935.14	ENST00000406652.5	5484	17	-11	47736	-11	0	5prime_fragment	FALSE	canonical	3	138	junction_1	460.075141791724	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTTTATTTGGTTTAT	NA	False	NA	25	True	AATAAA	-17	NA	42568033	42709211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_42568227_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707902_42708055_42708873
transcript_5314.nnic	chr1	+	2535	7	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	9190	combination_of_known_splicesites	TRUE	canonical	3	13	junction_6	282.306374155613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	-10	True	NA	NA	False	NA	NA	NA	100038094	100071305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100069613
transcript_53140.known	chr2	+	2202	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_11	290.676664142347	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	-7	True	NA	19	True	AATAAA	-20	NA	42568516	42709544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
transcript_53142.known	chr2	+	1702	14	FSM	ENSG00000057935.14	ENST00000454356.5	1702	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	455.127474177817	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	30	True	NA	27	True	AATAAA	-19	NA	42568674	42709213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707910_42708055_42708873
transcript_5315.known	chr1	+	5708	8	FSM	ENSG00000117620.15	ENST00000370153.6	5708	8	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	31.2200877249091	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCTATATTTCCTTA	-9	True	NA	104	True	CATAAA	-15	NA	99970435	100026979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_99970645_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_53152.nic	chr2	+	1492	6	ISM	ENSG00000057935.14	ENST00000454356.5	1702	14	24	64023	24	945	5prime_fragment	FALSE	canonical	3	1481	junction_3	106.83931860509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCTACACCAGTG	54	False	NA	NA	False	NA	NA	NA	42568698	42645190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126
transcript_53154.known	chr2	-	1256	10	FSM	ENSG00000162882.15	ENST00000294973.11	1256	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	10.361371757222	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	-5	True	NA	-2	True	AATAAA	-19	NA	42792583	42767088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712_42769859_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_53155.known	chr2	-	1522	9	FSM	ENSG00000162882.15	ENST00000402698.6	1522	9	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	10.9515980569048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTCAATAAAGGCTTCC	4	True	NA	-33	True	NA	NA	NA	42792574	42767119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712_42769859_42770142_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_53156.nic	chr2	-	1126	9	NIC	ENSG00000162882.15	novel	1256	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_3	12.5772612281053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	-21	False	NA	-2	True	AATAAA	-19	NA	42792599	42767088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_42767516_42767594_42767678_42767859_42767929_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_53157.known	chr2	-	908	4	FSM	ENSG00000162882.15	ENST00000402268.1	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCTTCCAGGTCACA	11	True	NA	NA	False	NA	NA	NA	42792567	42782786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_42783421_42783783_42783868_42788528_42788608_42792456
transcript_5316.known	chr1	-	655	2	FSM	ENSG00000228084.2	ENST00000454219.2	726	2	71	0	71	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGGGTATGTCTTTATC	61	False	NA	-3	True	ATTAAA	-17	NA	99969864	99968382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_99968478_99969304
transcript_53161.known	chr2	-	6091	38	FSM	ENSG00000115970.19	ENST00000405975.7	6091	38	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_18	12.7501127911481	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	-13	True	NA	-15	True	CATAAA	-19	NA	43596038	43230850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_53162.nnic	chr2	-	3277	20	NNC	ENSG00000115970.19	novel	5900	36	NA	NA	-21	2996	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	19.7374736741056	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGGAAAGATTTGGGT	-34	True	NA	-8	True	AATAAA	-17	NA	43596059	43549071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577123_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_53163.nic	chr2	-	3397	20	ISM	ENSG00000115970.19	ENST00000405975.7	6091	38	-21	318221	-21	2996	5prime_fragment	FALSE	canonical	3	71	junction_19	11.3871677790266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGGAAAGATTTGGGT	-34	True	NA	-8	True	AATAAA	-17	NA	43596059	43549071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_53165.nic	chr2	-	3099	18	ISM	ENSG00000115970.19	ENST00000405975.7	6091	38	-21	321217	-21	0	5prime_fragment	FALSE	canonical	3	71	junction_17	11.4120679159233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCTGTGTATATTTTTA	-34	True	NA	NA	False	AATAAA	-26	NA	43596059	43552067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_53166.nic	chr2	-	2884	17	NIC	ENSG00000115970.19	novel	6091	38	NA	NA	-21	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.0262362332013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTATCTGTGTATATT	-34	True	NA	NA	False	AATAAA	-22	NA	43596059	43552071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_43552340_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_53167.known	chr2	-	3043	17	FSM	ENSG00000115970.19	ENST00000404790.5	3043	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_16	11.6241599158821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCTTTCTCCACCAAA	2	True	NA	NA	False	AATAAA	-19	NA	43596023	43556092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_53170.known	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	27.976552682559	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	19	True	NA	12	True	AATAAA	-13	NA	43774081	43809997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_53173.nic	chr2	+	1402	12	ISM	ENSG00000138036.18	ENST00000260605.12	1399	13	0	4455	0	0	5prime_fragment	FALSE	canonical	3	64	junction_6	21.2878733958798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCTGCTGGAGAGACAT	-24	True	NA	37	True	ATTAAA	-19	NA	43774038	43805555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153
transcript_5318.known	chr1	+	2779	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_6	46.3520484627618	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	-10	True	NA	29	True	AATAAA	-34	NA	100038094	100083377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_53180.nic	chr2	+	858	8	ISM	ENSG00000138036.18	ENST00000260605.12	1399	13	0	13111	0	940	5prime_fragment	FALSE	canonical	3	64	junction_6	21.3072757526625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTCCCGTTGCTTTCCC	-24	True	NA	NA	False	AATAAA	-17	NA	43774038	43796899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717
transcript_53181.known	chr2	+	1133	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	11.689311356962	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCAGCATTTTATAT	-14	True	NA	NA	False	AATAAA	-18	NA	43774048	43795179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
transcript_53184.known	chr2	+	2608	6	FSM	ENSG00000138032.21	ENST00000282412.9	2608	6	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_5	157.618019274447	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	-16	True	NA	NA	False	AATAAA	-23	NA	44168874	44231472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_53185.known	chr2	+	3877	6	FSM	ENSG00000138032.21	ENST00000378551.6	3877	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	239.276074859147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGCCTGGCTATTCT	-14	True	NA	NA	False	AGTAAA	-35	NA	44168876	44234646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44232315
transcript_53186.known	chr2	-	3080	15	FSM	ENSG00000138078.16	ENST00000410081.5	3080	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	58.6938181217944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTAAAGTTTTTGAATA	-19	True	NA	-124	True	GATAAA	-17	NA	44361806	44320921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361379
transcript_53187.known	chr2	-	5212	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	64.0376164963267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTGTAATTTTATTT	-1	True	NA	-10	True	ATTAAA	-13	NA	44361494	44318765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
transcript_53193.known	chr2	-	5829	14	FSM	ENSG00000138078.16	ENST00000409411.6	5829	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	47.1748604197331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-1	True	NA	NA	False	ATTAAA	-19	NA	44361494	44317606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
transcript_53194.known	chr2	-	4703	14	FSM	ENSG00000138078.16	ENST00000409957.5	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	55.3114901873522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	0	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361416
transcript_53195.known	chr2	-	6049	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	52.2456645804762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTCTCAATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	44361862	44317610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
transcript_532.known	chr1	+	567	4	FSM	ENSG00000171735.19	ENST00000473578.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	4416	junction_1	530.288181610297	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAATTTAAGTTT	10	True	NA	34	True	AATAAA	-19	NA	6785479	6872038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756
transcript_53211.nic	chr2	+	1296	9	NIC	ENSG00000143919.15	novel	594	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	65.9117544524495	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	-3	True	NA	25	True	AATAAA	-29	NA	44676554	44772592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_44676776_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_53213.known	chr2	+	1114	4	FSM	ENSG00000143919.15	ENST00000403853.7	1114	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	121.836867253809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGAGATGACTCT	10	True	NA	NA	False	AATAAA	-33	NA	44361963	44457261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44456567
transcript_53215.known	chr2	-	910	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCAGTATGGTTGGA	6991	False	NA	NA	False	NA	NA	NA	44935644	44923034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_44923580_44935279
transcript_53217.known	chr2	-	3667	21	FSM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_20	15.011662133155	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	-10	True	NA	-6	True	AATAAA	-17	NA	45611267	45388679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45476992_45477076_45488239_45488332_45546731_45546840_45547521_45547613_45551124_45551283_45553622_45553731_45562652_45562757_45573206_45573343_45574626_45574724_45579874_45580014_45581692_45581811_45585607_45585775_45599448_45599836_45601902_45602084_45605361_45605442_45611218
transcript_53234.known	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	141.106835018325	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-6	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_53236.nic	chr2	-	1148	7	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	126.814497068224	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	36	False	NA	NA	False	AATAAA	-15	NA	46617120	46581284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_46581592_46591802_46591926_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_53239.nnic	chr2	-	844	6	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_2	145.738944692213	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-20	True	NA	NA	False	AATAAA	-15	NA	46617065	46581284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_46581592_46591802_46591926_46592474_46592584_46612227_46612345_46613693_46613786_46616969
transcript_5324.nic	chr1	-	1480	11	ISM	ENSG00000156876.10	ENST00000287482.6	3848	17	-93	23859	-68	-23859	5prime_fragment	FALSE	canonical	3	59	junction_9	8.57263086805912	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAAAAGGAATTACAAG	73	False	NA	NA	False	AAGAAA	-35	NA	100133023	100107428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_53241.known	chr2	-	1294	6	FSM	ENSG00000151665.13	ENST00000281382.11	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_5	34.8114923552553	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTATCTGGGAGGGAG	4	True	NA	NA	False	NA	NA	NA	46617041	46580936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_53242.known	chr2	+	6323	5	FSM	ENSG00000119878.6	ENST00000238892.4	6323	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	23.6577154433813	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATCTTTTTCATATT	2	True	NA	NA	False	NA	NA	NA	46617214	46630176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_46617299_46618772_46618839_46619626_46619682_46623763_46623868_46624162
transcript_53250.nnic	chr2	-	850	5	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-139	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_4	135.916104638119	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	46617194	46581284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46616969
transcript_53251.known	chr2	-	737	5	FSM	ENSG00000151665.13	ENST00000412717.1	737	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	152.38007579733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAGCCAAGCAGTTCCA	-10	True	NA	NA	False	NA	NA	NA	46617055	46581415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46614936_46615186_46616969
transcript_53258.nnic	chr2	-	669	4	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	163.976285548314	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-1	True	NA	NA	False	AATAAA	-15	NA	46617105	46581284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46616969
transcript_53260.known	chr2	-	821	5	FSM	ENSG00000180398.13	ENST00000409973.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	352.693209461141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGCTATTAAATAC	-30	True	NA	40	True	AATGAA	-29	NA	46915810	46905270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46910779_46910874_46915722
transcript_53262.known	chr2	-	3978	4	FSM	ENSG00000180398.13	ENST00000649435.1	3978	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	303.33589742506	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTATTCTTGTA	19	True	NA	-98	True	NA	NA	NA	46915761	46901966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905591_46907809_46907970_46909022_46909178_46915722
transcript_53263.known	chr2	-	1113	4	FSM	ENSG00000180398.13	ENST00000409207.5	1113	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	329.08053725494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGGTCTCTCCCACAA	-2	True	NA	NA	False	NA	NA	NA	46941732	46904957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46941571
transcript_53265.known	chr2	-	648	4	FSM	ENSG00000180398.13	ENST00000409218.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	331.43559790034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAATAACTCATTTCCA	NA	False	NA	-25	True	NA	NA	NA	46916112	46905393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46915980
transcript_53269.known	chr2	-	3975	3	FSM	ENSG00000180398.13	ENST00000409913.5	3975	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	319.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	237	False	NA	-5	True	AATAAA	-16	NA	46915816	46901873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46905595_46907809_46907970_46915722
transcript_53271.known	chr2	-	665	3	FSM	ENSG00000180398.13	ENST00000477791.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	50.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTAGTTCTACGTACTCA	-11	True	NA	NA	False	ATTAAA	-27	NA	46915791	46907528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_46907970_46909022_46909178_46915722
transcript_53277.known	chr2	-	770	7	FSM	ENSG00000143933.20	ENST00000409563.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4944.56963917657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTATTTGCCTTTTCT	1	True	NA	NA	False	NA	NA	NA	47176511	47160738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47167475_47167691_47170733_47170765_47176440
transcript_53280.known	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	4782.40425646162	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-4	True	NA	23	True	AATAAA	-4	NA	47176516	47160179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
transcript_53283.known	chr2	-	1076	6	FSM	ENSG00000143933.20	ENST00000655728.1	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	4120.55232220148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTACACTATTTTTTTG	289	False	NA	-60	True	NA	NA	NA	47176223	47160338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176031
transcript_53285.known	chr2	-	1242	6	FSM	ENSG00000143933.20	ENST00000652974.1	1242	6	0	0	0	0	multi-exon	FALSE	canonical	3	9554	junction_1	684.268777601317	4939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTCTGCATCTGAGT	NA	False	NA	-12	True	AATAAA	-20	NA	47176623	47160163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
transcript_5329.nic	chr1	-	823	6	ISM	ENSG00000156876.10	ENST00000462159.1	3972	16	-133	36831	-133	-36824	5prime_fragment	FALSE	canonical	3	59	junction_4	9.59166304662544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCAAATTTCATTTTG	8	True	NA	NA	False	NA	NA	NA	100133088	100120393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_53290.known	chr2	-	1294	6	FSM	ENSG00000143933.20	ENST00000656538.1	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	4117.76752136397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTGTTTTCCAATA	1	True	NA	-2	True	NA	NA	NA	47176511	47160204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176235
transcript_53291.known	chr2	+	1530	10	FSM	ENSG00000119888.11	ENST00000405271.5	1530	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1019.18845711238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTCCACAGTAAAATC	9843	False	NA	-1	True	ATTAAA	-1	NA	47345157	47386900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47345224_47368927_47369236_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_53292.nic	chr2	+	1544	9	ISM	ENSG00000119888.11	ENST00000405271.5	1530	10	23810	-120	-343	0	3prime_fragment	FALSE	canonical	3	138	junction_1	796.154311361811	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAACTTTGACATTTC	-7	True	NA	15	True	AATAAA	-16	NA	47368967	47387020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_47369236_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_53293.known	chr2	+	1547	9	FSM	ENSG00000119888.11	ENST00000263735.9	1547	9	0	0	0	0	multi-exon	FALSE	canonical	3	2083	junction_2	174.182689653708	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAACTTTGACATTTC	7	True	NA	15	True	AATAAA	-16	NA	47369310	47387020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47369582_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_533.known	chr1	+	486	4	FSM	ENSG00000171735.19	ENST00000557126.5	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	2134.62882539851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATAGAATAAAGTGAC	21	True	NA	-29	True	ACTAAA	-2	NA	6785490	6887865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6887653
transcript_5330.known	chr1	-	3848	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_15	8.53828693298603	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTGAAAATCAAGTACT	4	True	NA	-35	True	AATAAA	-18	NA	100132930	100083569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_53306.known	chr2	+	3115	16	FSM	ENSG00000095002.15	ENST00000233146.7	3115	16	0	0	0	0	multi-exon	FALSE	canonical	3	1229	junction_10	175.624903321444	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	0	True	NA	30	True	AATAAA	-19	NA	47403155	47483223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_53308.nnic	chr2	+	3019	15	NIC	ENSG00000095002.15	novel	3115	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	62	junction_4	401.59635537821	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	-2	True	NA	30	True	AATAAA	-19	NA	47403101	47483223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_5331.known	chr1	+	3130	11	FSM	ENSG00000122435.11	ENST00000370141.8	3128	11	0	-2	0	2	multi-exon	FALSE	canonical	3	36	junction_5	10.5470374987482	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	7	True	NA	12	True	AATAAA	-20	NA	100133162	100150498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_53310.nic	chr2	+	1795	11	ISM	ENSG00000095002.15	ENST00000233146.7	3115	16	-62	12223	-25	-12221	5prime_fragment	FALSE	canonical	3	1229	junction_10	119.497322145728	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACAGAATATGAAGAAG	9	True	NA	NA	False	AATGAA	-15	NA	47403093	47471000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964
transcript_53322.known	chr2	+	3959	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	471.803029627229	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	-2	True	NA	-18	True	NA	NA	NA	47783150	47806915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_53323.nic	chr2	+	4069	10	NIC	ENSG00000116062.18	novel	4055	10	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	121	junction_1	451.360658946307	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTTCCATTTTCTTT	770	False	NA	19	True	AATAAA	-19	NA	47783951	47806952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_47784106_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_53325.known	chr2	+	4055	10	FSM	ENSG00000116062.18	ENST00000538136.1	4055	10	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	580.953388410957	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	773	False	NA	12	True	AATAAA	-12	NA	47783954	47806945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47784106_47790926_47791124_47795893_47796064_47798614_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_53327.known	chr2	+	656	2	FSM	ENSG00000233230.2	ENST00000417692.2	1041	2	19	366	12	154	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGATGATCTCTCT	13	False	NA	NA	False	NA	NA	NA	47906829	47907810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_47906993_47907317
transcript_53328.known	chr2	-	963	3	FSM	ENSG00000230773.9	ENST00000661667.1	963	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTTGTTCTAAGTTGT	1486	False	NA	NA	False	AATATA	-34	NA	48314185	48242803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_48243620_48313689_48313765_48314113
transcript_53330.known	chr2	+	5437	7	FSM	ENSG00000170802.17	ENST00000340553.8	5437	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	23.5984933605705	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	-11	True	NA	10	True	AATAAA	-19	NA	48314681	48379295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_48314815_48328560_48328703_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
transcript_53333.known	chr2	+	3208	22	FSM	ENSG00000162869.16	ENST00000416913.5	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	24.151261803724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	-32	True	NA	7	True	AATAAA	-17	NA	48440768	48515385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_53335.known	chr2	+	3173	22	FSM	ENSG00000162869.16	ENST00000294952.13	3173	22	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	14.8897688168588	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	-35	True	NA	8	True	AATAAA	-18	NA	48440765	48515386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_53337.nic	chr2	+	1387	11	ISM	ENSG00000162869.16	ENST00000416913.5	3208	22	8	43935	8	0	5prime_fragment	FALSE	canonical	3	26	junction_2	31.9906236263065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGATCTGCCTGAC	-24	True	NA	22	True	AATAAA	-14	NA	48440776	48471450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278
transcript_53338.nic	chr2	+	1348	11	ISM	ENSG00000162869.16	ENST00000281394.8	3137	21	8	43936	8	0	5prime_fragment	FALSE	canonical	3	92	junction_2	16.7403703662733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGATCTGCCTGAC	-24	True	NA	22	True	AATAAA	-14	NA	48440776	48471450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278
transcript_53342.known	chr2	+	5529	4	FSM	ENSG00000243244.7	ENST00000404752.6	5529	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.36357401145817	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTGTGCTGTGAATT	-15	True	NA	14	True	ATTAAA	-17	NA	48530153	48598513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_48530217_48580586_48582564_48591652_48591856_48595227
transcript_53343.nic	chr2	-	1060	2	ISM	ENSG00000179915.25	ENST00000626899.1	2543	6	268	108653	-117	-49	5prime_fragment	FALSE	canonical	3	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGATAAAGGAGGGCA	-1	True	NA	NA	False	AAGAAA	-5	NA	51032268	51028422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_51029195_51031980
transcript_53350.known	chr2	-	2226	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	25.6851785094386	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGCTTTTTTTTTTT	-1	True	NA	-5	True	ATTAAA	-16	NA	53786953	53669979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
transcript_53354.known	chr2	-	1734	9	FSM	ENSG00000115239.24	ENST00000394717.3	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	77.3397536846349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	53787009	53670318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53786820
transcript_53363.nnic	chr2	-	973	4	NNC	ENSG00000115239.24	novel	623	3	NA	NA	-23	-4324	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	93.6269192059634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTGTGTCTTTA	-7	True	NA	-1	True	NA	NA	NA	53786872	53733784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_53734338_53750782_53750942_53765376_53765586_53786820
transcript_53365.known	chr2	+	1309	3	FSM	ENSG00000143942.5	ENST00000295304.5	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	11	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTAGTCTGTCATTCAC	-13	True	NA	17	True	CATAAA	-28	NA	53767803	53775196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53768022_53771906_53771943_53774141
transcript_53368.known	chr2	+	2446	14	FSM	ENSG00000068912.15	ENST00000185150.9	2446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	110.932145153704	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCATGTAGTCAATG	-14	True	NA	22	True	AATAAA	-14	NA	53787043	53818796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_53372.known	chr2	+	1756	13	FSM	ENSG00000068912.15	ENST00000405123.7	1756	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	142.497051626419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATTCCAAAATAAATCTC	22	True	NA	72	True	TATAAA	-28	NA	53787079	53818220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814859_53814936_53817897
transcript_53373.known	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	131.810127540422	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	22	True	NA	45	True	AATAAA	-37	NA	53787079	53818819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_5338.nic	chr1	+	3107	11	NIC	ENSG00000122435.11	novel	3128	11	NA	NA	-6	2	intron_retention	FALSE	canonical	2	18	junction_5	14.4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	-12	True	NA	12	True	AATAAA	-20	NA	100133143	100150498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140449_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_53381.nic	chr2	+	686	5	ISM	ENSG00000068912.15	ENST00000690769.1	2759	8	-6	5737	0	1544	5prime_fragment	FALSE	canonical	3	368	junction_2	12.9687123493429	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTCTACCCAGTGAT	-1	True	NA	NA	False	AAAAAG	-1	NA	53787014	53797795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731
transcript_53382.nic	chr2	+	414	2	FSM	ENSG00000068912.15	ENST00000494373.2	2214	2	-51	1851	0	-1851	multi-exon	FALSE	canonical	3	385	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAAAATATAAATGCA	-1	True	NA	NA	False	TATAAA	-33	NA	53787014	53794400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53787373_53794344
transcript_53384.known	chr2	+	1262	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.936029266015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	-2	True	NA	NA	False	CATAAA	-26	NA	53971112	54305300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
transcript_53388.known	chr2	+	993	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	16.7597401199687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	38	False	NA	NA	False	CATAAA	-26	NA	54115503	54305300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
transcript_53390.nic	chr2	+	286	2	ISM	ENSG00000170634.13	ENST00000606082.5	713	3	250	1612	-20	-1612	5prime_fragment	FALSE	canonical	3	87	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-27	True	NA	11	True	AATAAA	-22	NA	53971087	53973764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_53971322_53973712
transcript_53392.nic	chr2	+	1299	8	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-46	39978	-46	-6874	5prime_fragment	FALSE	canonical	3	387	junction_1	43.4229319646677	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTGAAAAGTATGAATCA	322	False	NA	NA	False	NA	NA	NA	54558347	54622330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299
transcript_53393.nic	chr2	+	902	4	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-46	46066	-46	-12962	5prime_fragment	FALSE	canonical	3	387	junction_1	59.1175852762009	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAATCTGCCAAGGA	322	False	NA	NA	False	NA	NA	NA	54558347	54616242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206
transcript_53396.known	chr2	-	2333	7	FSM	ENSG00000115310.19	ENST00000317610.11	2333	7	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_6	126.399828586382	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-11	True	NA	-5	True	AATAAA	-17	NA	55050544	54972188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
transcript_53397.nnic	chr2	-	1671	7	NIC	ENSG00000115310.19	novel	4161	9	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	527.928472638313	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-4	True	NA	-5	True	AATAAA	-17	NA	55050565	54972188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55050427
transcript_53398.nic	chr2	-	1026	7	NIC	ENSG00000115310.19	novel	1898	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_6	517.613567785424	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCAGTTTGTGCAC	1612	False	NA	21	True	NA	NA	NA	55049657	54972795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049557
transcript_53399.nnic	chr2	-	1064	7	NIC	ENSG00000115310.19	novel	4161	9	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	527.928472638313	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCAGTTTGTGCAC	-4	True	NA	21	True	NA	NA	NA	55050565	54972795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55050427
transcript_534.known	chr1	+	863	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_3	2347.84454340572	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCACTTGCGTCG	-6	True	NA	9	True	AATAAA	-15	NA	6785463	6888201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
transcript_53403.known	chr2	+	705	6	FSM	ENSG00000143947.15	ENST00000402285.7	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_1	6103.88383244635	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	NA	False	NA	10	True	NA	NA	NA	55231902	55235588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55232109_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_53405.known	chr2	+	785	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	0	0	0	0	multi-exon	FALSE	canonical	1	5160	junction_3	4046.06468559266	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTGTGTTTCTGTCC	-11	True	NA	5	True	AATATA	-2	NA	55232687	55235853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_53408.nic	chr2	-	2710	17	NIC	ENSG00000085760.15	novel	2536	16	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	57.4075343487246	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	-6	True	NA	-2	True	ATTAAA	-16	NA	55269293	55236620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55266380_55266519_55267568_55267636_55268577_55268740_55269168
transcript_53416.nic	chr2	-	2859	16	NIC	ENSG00000085760.15	novel	2536	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	48.5004467333378	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	3	True	NA	-2	True	ATTAAA	-16	NA	55269228	55236620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55268816
transcript_53418.known	chr2	-	2536	16	FSM	ENSG00000085760.15	ENST00000263629.9	2536	16	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_13	27.0871843415951	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	0	True	NA	24	True	ATTAAA	-42	NA	55269231	55236594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_53421.nnic	chr2	-	2500	16	NNC	ENSG00000085760.15	novel	2536	16	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	45.6928878492047	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	-6	True	NA	-2	True	ATTAAA	-16	NA	55269293	55236620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268649_55268740_55269168
transcript_53431.known	chr2	-	2386	15	FSM	ENSG00000085760.15	ENST00000403721.5	2386	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	50.389351401798	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-12	True	NA	24	True	ATTAAA	-42	NA	55269243	55236594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55269168
transcript_53448.nic	chr2	-	1745	12	ISM	ENSG00000085760.15	ENST00000263629.9	2536	16	-62	7001	-50	-3585	5prime_fragment	FALSE	canonical	3	136	junction_9	10.0387678279823	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGAAGAAAAGCGAAAG	-6	True	NA	NA	False	NA	NA	NA	55269293	55243595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_53454.known	chr2	-	580	4	FSM	ENSG00000085760.15	ENST00000412530.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	62.9338276816742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAACTTGCTACGATTT	207	False	NA	NA	False	NA	NA	NA	55269138	55263836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55263866_55267568_55267636_55268577_55268740_55268816
transcript_53457.nic	chr2	-	3473	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-52	-179	0	179	intron_retention	TRUE	canonical	3	44	junction_4	12.1455879282334	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAAGGAGCTTGTGAA	-32	True	NA	NA	False	TATAAA	-34	NA	55419888	55334156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_53458.nic	chr2	-	3294	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-52	0	0	0	intron_retention	FALSE	canonical	3	44	junction_4	12.1455879282334	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATAAGAAACAATTGGAG	-32	True	NA	NA	False	AATAAA	-32	NA	55419888	55334335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_53459.nic	chr2	-	2841	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	508	-48	0	intron_retention	FALSE	canonical	3	44	junction_4	12.1455879282334	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTTAGAACAAGAAAATTC	-2	True	NA	NA	False	TTTAAA	-23	NA	55419943	55334843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_53460.nic	chr2	-	2695	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	654	-48	0	intron_retention	FALSE	canonical	3	44	junction_4	12.1455879282334	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAATTAAAAAAGAATTG	-2	True	NA	NA	False	AAGAAA	-37	NA	55419943	55334989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_53462.known	chr2	-	1875	14	FSM	ENSG00000115355.18	ENST00000642890.1	1875	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.3050871671833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATTGAATTTGAAAAAAG	1	True	NA	NA	False	AAGAAA	-18	NA	55419315	55335008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_53464.known	chr2	-	2316	13	FSM	ENSG00000115355.18	ENST00000647517.1	2316	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	19.3749551970808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGCAAGATTGAATTTG	126	False	NA	NA	False	AAAAAG	-44	NA	55419815	55335015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_53467.nic	chr2	-	2350	13	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	5160	-48	-2780	intron_retention	FALSE	canonical	3	44	junction_2	6.97017455544216	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAAAAGAAAATCAAAGG	-2	True	NA	NA	False	NA	NA	NA	55419943	55339495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_5347.known	chr1	+	1582	8	FSM	ENSG00000122435.11	ENST00000482437.5	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	11.962526523119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	9	True	NA	NA	False	AATAAA	-9	NA	100133164	100144567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100141020_100143136_100143210_100144068
transcript_53470.nic	chr2	-	2006	12	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-47	9443	-5	0	intron_retention	FALSE	canonical	3	44	junction_1	7.19618815533211	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAGATTGAAGAAT	-27	True	NA	NA	False	AATAAA	-19	NA	55419883	55343778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_53474.known	chr2	-	1270	2	FSM	ENSG00000115355.18	ENST00000642784.1	1270	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTGATGAGATG	280	False	NA	NA	False	AGTAAA	-20	NA	55419661	55418291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55418917_55419016
transcript_53475.known	chr2	+	2154	1	FSM	ENSG00000162997.15	ENST00000563365.1	2154	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTCTTATTTGTAA	NA	False	NA	5	True	AATAAA	-14	NA	55282318	55284472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55282300_55284500
transcript_53477.known	chr2	+	1184	10	FSM	ENSG00000163001.12	ENST00000349456.9	1184	10	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	16.3850277937655	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	44	True	NA	21	True	AATAAA	-21	NA	55519717	55545079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219_55544370_55544906
transcript_53481.known	chr2	+	1575	8	FSM	ENSG00000163001.12	ENST00000406691.7	1575	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	90.7993976425224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTTTTGACAATTATG	-28	True	NA	NA	False	AAGAAA	-13	NA	55519645	55539543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55538764
transcript_53483.known	chr2	+	759	6	FSM	ENSG00000163001.12	ENST00000403007.4	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	17.4287119432275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGTATGTCGTGCAT	57	True	NA	NA	False	AATATA	-7	NA	55519730	55535914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711
transcript_53486.known	chr2	-	5506	17	FSM	ENSG00000275052.5	ENST00000616407.2	5506	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	104.02035558005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-11	True	NA	0	True	AATAAA	-18	NA	55617622	55547291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_5349.known	chr1	-	1933	12	FSM	ENSG00000137992.15	ENST00000681780.1	1933	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	26.2379448902942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGCCGGGCATGGTG	-3	True	NA	NA	False	NA	NA	NA	100249833	100195970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100248898_100249086_100249769
transcript_53490.known	chr2	-	4310	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	94.6019497097649	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	3	True	NA	NA	False	ATTAAA	-20	NA	55617608	55548377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_535.known	chr1	+	546	4	FSM	ENSG00000171735.19	ENST00000467404.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2626.57850951893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATCTGTGTTTTCAT	11	False	NA	15	True	ATTAAA	-23	NA	6785517	6872019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6806982_6807089_6825091_6825211_6871756
transcript_53500.nnic	chr2	-	1970	3	NNC	ENSG00000275052.5	novel	2981	3	NA	NA	-118	179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	195.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATGTTTCCTATAC	1134	False	NA	NA	False	ATTAAA	-21	NA	55617740	55613996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55615314_55615450_55615507_55617143
transcript_53501.nnic	chr2	-	1351	3	NNC	ENSG00000275052.5	novel	2981	3	NA	NA	2	-320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	195.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTCTGCAGCTTGCA	-9	True	NA	NA	False	TTTAAA	-28	NA	55617620	55614495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55615314_55615450_55615507_55617143
transcript_53502.nic	chr2	-	2178	2	ISM	ENSG00000275052.5	ENST00000612688.1	2981	3	1069	-179	-189	179	3prime_fragment	FALSE	canonical	3	391	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATGTTTCCTATAC	1063	False	NA	NA	False	ATTAAA	-21	NA	55617811	55613996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55615507_55617143
transcript_53503.known	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	192.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-6	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55615507_55617143_55617979_55618065
transcript_53505.known	chr2	+	465	1	FSM	ENSG00000272606.1	ENST00000608113.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGAAAGTAAGTCTGCT	-11	True	NA	30	True	AATACA	-22	NA	55617908	55618373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_55617900_55618400
transcript_53507.nnic	chr2	-	2575	29	NNC	ENSG00000138035.15	novel	3308	29	NA	NA	5	-222	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	85.2819079672272	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTACTTATCAAATTGA	-21	False	NA	NA	False	NA	NA	NA	55693858	55635315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55635579_55636311_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_53509.known	chr2	-	4549	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	0	0	0	multi-exon	FALSE	canonical	2	265	junction_9	47.0959094970893	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGACTATTATTTAATAA	-7	True	NA	0	True	ATTAAA	-23	NA	55693844	55634060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_5351.known	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	9.27415764368926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-4	True	NA	0	True	AATAAA	-20	NA	100249834	100186918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_53513.nnic	chr2	-	2454	27	NIC	ENSG00000138035.15	novel	4549	28	NA	NA	5	387	combination_of_known_splicesites	FALSE	canonical	2	7	junction_19	89.1158162069161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTTTTGTTTTTAC	-21	False	NA	11	True	ATTAAA	-30	NA	55693858	55635982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_53518.nnic	chr2	-	1538	12	NNC	ENSG00000138035.15	novel	583	6	NA	NA	5	8976	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	122.870421566249	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTTGATCTGTGAAA	-21	False	NA	NA	False	AATATA	-15	NA	55693858	55670705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_55671233_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_53519.nic	chr2	-	648	8	ISM	ENSG00000138035.15	ENST00000415374.5	3308	29	-35	45179	5	-66	5prime_fragment	FALSE	canonical	3	346	junction_6	36.702888725771	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAAAGAAATGTCTTCT	-21	False	NA	NA	False	NA	NA	NA	55693858	55679747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_53521.known	chr2	-	2708	12	FSM	ENSG00000115380.20	ENST00000355426.8	2708	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_11	17.7563863496587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	7	True	NA	-5	True	AATAAA	-25	NA	55923782	55865966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55922898_55922940_55923710
transcript_53524.known	chr2	-	3024	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	10.2610915598683	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	NA	False	NA	-5	True	AATAAA	-25	NA	55924139	55865966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_53526.nic	chr2	-	1839	9	NIC	ENSG00000115380.20	novel	1809	9	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	19.7405040462497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGGATCTGCCATAT	278	False	NA	-29	True	AATAAA	-16	NA	55923839	55866611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_53528.nnic	chr2	+	2271	4	NNC	ENSG00000271894.1	novel	2289	4	NA	NA	-29635	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.5521135891752	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTCTTTGTCTTCTTC	NA	False	NA	1	True	AATAAA	-13	NA	56117994	56386171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_56118172_56147629_56147741_56342878_56342956_56384265
transcript_53529.nnic	chr2	+	922	3	NNC	ENSG00000271894.1	novel	2289	4	NA	NA	-29742	-204518	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	12	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGAGTTTCTGTT	NA	False	NA	5	True	AATAAA	-18	NA	56117887	56181653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_56118172_56147629_56147741_56181126
transcript_53531.known	chr2	+	1870	14	FSM	ENSG00000028116.18	ENST00000432057.2	1870	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	104.599716021201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGTAATTGGCTTT	43	False	NA	-76	True	NA	NA	NA	58046711	58159784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_58046822_58048826_58048968_58058351_58058489_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_53536.nic	chr2	+	1863	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	3	40	junction_12	83.9839376020673	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	7	False	NA	11	True	AATAAA	-19	NA	58046764	58159871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154753_58154803_58159348
transcript_53537.nic	chr2	+	1858	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	83.9839376020673	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	7	False	NA	11	True	AATAAA	-19	NA	58046764	58159871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
transcript_53540.nic	chr2	+	1904	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	63.9797602544916	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-41	True	NA	11	True	AATAAA	-19	NA	58046627	58159871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_53542.known	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	33.7576123102463	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-4	True	NA	11	True	AATAAA	-19	NA	58046805	58159871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_53543.nnic	chr2	+	2025	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	73.1761573191706	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	4	True	NA	11	True	AATAAA	-19	NA	58046813	58159871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_58047129_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_53549.nic	chr2	+	2072	9	ISM	ENSG00000028116.18	ENST00000340157.9	1773	13	-41	26777	-41	-26690	5prime_fragment	FALSE	canonical	3	213	junction_1	37.0877338213054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTTAATTCTAATGA	7	False	NA	2	True	AATAAA	-24	NA	58046764	58133094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807
transcript_53559.nic	chr2	-	1750	15	NIC	ENSG00000115392.12	novel	1658	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	238.250168640324	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-25	True	NA	-9	True	AATAAA	-14	NA	58241372	58159246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58194228_58194274_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53561.known	chr2	-	1698	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	157.516600045649	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-3	True	NA	-9	True	AATAAA	-14	NA	58241350	58159246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53562.known	chr2	-	1658	14	FSM	ENSG00000115392.12	ENST00000233741.9	1658	14	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_7	74.1994752688826	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	22	True	NA	-9	True	AATAAA	-14	NA	58241325	58159246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53566.known	chr2	-	1576	13	FSM	ENSG00000115392.12	ENST00000403295.7	1576	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	204.459449932417	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	24	True	NA	-5	True	AATAAA	-18	NA	58241323	58159242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_5357.nic	chr1	-	532	4	ISM	ENSG00000137992.15	ENST00000370131.3	1521	8	-14	20105	0	-20105	5prime_fragment	FALSE	canonical	3	63	junction_3	4.98887651569859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTTTTTTTTCT	-4	True	NA	NA	False	ATTAAA	-14	NA	100249834	100230647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_100230915_100235435_100235512_100240760_100240885_100249769
transcript_5358.known	chr1	-	7681	2	FSM	ENSG00000224616.4	ENST00000670421.2	7697	2	16	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTATAACAATAATAAAAAA	13	True	NA	NA	False	NA	NA	NA	100266120	100258353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100265918_100266003
transcript_53587.known	chr2	-	849	10	FSM	ENSG00000115392.12	ENST00000403676.5	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	216.47889299216	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTTCGGTGAAGAGCT	45	False	NA	NA	False	NA	NA	NA	58241302	58159754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58241217
transcript_53589.nic	chr2	-	1299	8	NIC	ENSG00000115392.12	novel	1698	14	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	243.274934749865	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	58241410	58159246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58241217
transcript_5359.known	chr1	-	423	4	FSM	ENSG00000224616.4	ENST00000421185.1	423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.87400787401181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGATGTTTTACAATC	13	True	NA	NA	False	NA	NA	NA	100266120	100264008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100264032_100265067_100265248_100265814_100265918_100266003
transcript_53592.known	chr2	-	522	6	FSM	ENSG00000115392.12	ENST00000481670.2	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	293.757314802542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGGTGTGCATGGA	88	False	NA	-4	True	AATAAA	-16	NA	58241259	58213504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_58213707_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_53594.known	chr2	+	1182	7	FSM	ENSG00000233723.10	ENST00000422793.3	1187	7	0	5	0	0	multi-exon	FALSE	canonical	1	8	junction_1	15.0489940601431	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTTGGCATCTACTT	-4	True	NA	14	True	AATAAA	-17	NA	58428411	58931076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_536.known	chr1	+	538	3	FSM	ENSG00000171735.19	ENST00000490738.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_1	2254.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATGAGTGCATTTCC	-16	True	NA	49	True	AATAAA	-34	NA	6785453	6872053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6825091_6825211_6871756
transcript_53600.nnic	chr2	+	965	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	26.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	2718	False	NA	10	True	AATAAA	-14	NA	60417692	60424691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_60417982_60419876_60420153_60424291
transcript_53602.nnic	chr2	+	752	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	31.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	2740	False	NA	10	True	AATAAA	-14	NA	60417714	60424691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_60417982_60420067_60420153_60424291
transcript_53604.known	chr2	-	1519	5	FSM	ENSG00000119866.22	ENST00000489516.7	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	192.213423048444	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGATTTGAATTTGTC	4525	False	NA	NA	False	AATATA	-18	NA	60550925	60451780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60550867
transcript_53605.nnic	chr2	-	1422	5	NNC	ENSG00000119866.22	novel	2494	5	NA	NA	574	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	204.335508416917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	2615	False	NA	-7	True	AATAAA	-14	NA	60552835	60452157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60552497
transcript_53607.known	chr2	-	866	4	FSM	ENSG00000119866.22	ENST00000643222.1	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	11.7756811551038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATGAGTGATGCCCTG	5	True	NA	NA	False	NA	NA	NA	60550907	60452313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_60452667_60462281_60462425_60545970_60546301_60550867
transcript_53609.known	chr2	+	7348	22	FSM	ENSG00000115421.13	ENST00000238714.8	7348	22	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	14.0258911867577	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGATTGAGTGATGTT	13	True	NA	NA	False	AATAAA	-17	NA	60756267	60802086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_53611.nic	chr2	+	2268	20	ISM	ENSG00000115421.13	ENST00000238714.8	7348	22	-27	7336	-12	746	5prime_fragment	TRUE	canonical	3	114	junction_1	14.3609967323586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAGAAAGAAAAAGAAAAT	-14	True	NA	NA	False	NA	NA	NA	60756240	60794750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709
transcript_53614.known	chr2	-	1820	18	FSM	ENSG00000162927.14	ENST00000407787.5	1820	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	3.82307689629928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTGTGTTAAAT	-6	True	NA	NA	False	NA	NA	NA	61017193	60942224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61017148
transcript_53617.nnic	chr2	+	2799	5	NNC	ENSG00000162928.9	novel	4472	4	NA	NA	0	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	53.5274462308823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTTTAATTTTTC	-1	True	NA	17	True	AATAAA	-23	NA	61017719	61051726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471_61049490_61050898
transcript_53618.nnic	chr2	+	2796	5	NNC	ENSG00000162928.9	novel	4472	4	NA	NA	0	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	53.5274462308823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTTTAATTTTTC	-1	True	NA	17	True	AATAAA	-23	NA	61017719	61051726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471_61049494_61050905
transcript_53619.nic	chr2	+	1451	4	NIC	ENSG00000162928.9	novel	4472	4	NA	NA	-22	-3066	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	58.0344725141876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTGGTGACCTGGT	-23	True	NA	4	True	ATTAAA	-15	NA	61017697	61048924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61017875_61031418_61032114_61045725_61045852_61048471
transcript_53621.known	chr2	+	4472	4	FSM	ENSG00000162928.9	ENST00000295030.6	4472	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	6.16441400296898	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	-1	True	NA	6	True	AATAAA	-17	NA	61017719	61051990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471
transcript_53624.known	chr2	+	1108	3	FSM	ENSG00000162928.9	ENST00000401576.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGTGACTATTGTCCTT	NA	False	NA	20	True	AATAAA	-30	NA	61017561	61019081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61017616_61017695_61017852_61018183
transcript_53625.known	chr2	-	1227	3	FSM	ENSG00000162927.14	ENST00000398658.2	1227	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-6	True	NA	-8	True	AATAAA	-16	NA	61017193	61009847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61010889_61011764_61011906_61017148
transcript_53628.known	chr2	+	1014	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	9	True	NA	19	True	AATAAA	-29	NA	61017729	61019080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61017852_61018188
transcript_5363.known	chr1	+	1534	12	FSM	ENSG00000137996.13	ENST00000260563.4	1534	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	84.8868960674552	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATACATTTTTCTTTT	22	True	NA	NA	False	AATAAA	-18	NA	100266248	100291771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100266421_100266523_100266625_100267499_100267539_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_53630.known	chr2	+	4578	22	FSM	ENSG00000162929.14	ENST00000402291.6	4578	22	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_15	43.3727711693819	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGGAAAGTCTCTTT	-3	True	NA	8	True	AATAAA	-15	NA	61065870	61124280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_53631.nic	chr2	+	1411	10	ISM	ENSG00000162929.14	ENST00000402291.6	4578	22	19	35773	10	-1163	5prime_fragment	FALSE	canonical	3	99	junction_8	18.0868958771022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATATAGTTGTTGT	-33	True	NA	NA	False	GATAAA	-24	NA	61065889	61088507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
transcript_53633.nnic	chr2	+	1586	9	NNC	ENSG00000162929.14	novel	2640	11	NA	NA	10	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	46.1702014290603	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCTTTATGTTCAAA	-33	True	NA	NA	False	AATAAA	-25	NA	61065889	61089706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083264_61089243
transcript_53637.nic	chr2	+	1152	6	NIC	ENSG00000237651.8	novel	565	5	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	74.8053474024418	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	NA	False	NA	17	True	AATAAA	-21	NA	61145087	61164828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61157861_61158013_61159317_61159440_61162841_61162956_61163051_61163233_61164353
transcript_53639.nic	chr2	+	1030	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	78.9604331295111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	NA	False	NA	17	True	AATAAA	-21	NA	61145087	61164828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
transcript_53640.nnic	chr2	+	823	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-9	-147	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	80.521348100985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGTGAGCCATGTGC	-16	True	NA	12	True	AATAAA	-23	NA	61145098	61164661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61159317_61159440_61162841_61162956_61163051_61163233_61164353
transcript_53641.nnic	chr2	+	990	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	80.521348100985	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	-16	True	NA	17	True	AATAAA	-21	NA	61145098	61164828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_61145197_61159317_61159440_61162841_61162956_61163051_61163233_61164353
transcript_53645.known	chr2	+	879	4	FSM	ENSG00000237651.8	ENST00000426997.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.6877523799553	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	NA	False	NA	-3	True	AATAAA	-1	NA	61145067	61164808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61145197_61162841_61162956_61163051_61163233_61164353
transcript_53648.known	chr2	-	2532	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGGGTATACCAGTGGA	-9	True	NA	-24	True	AATAAA	-17	NA	61144950	61141591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61143946_61144772
transcript_53650.known	chr2	-	11675	80	FSM	ENSG00000115464.15	ENST00000398571.7	11675	80	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_65	178.552399764396	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-4	True	NA	-9	True	ATTAAA	-21	NA	61471087	61187462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
transcript_53653.nic	chr2	-	3200	2	ISM	ENSG00000115464.15	ENST00000453133.1	1409	13	-71	69474	-71	-69474	5prime_fragment	FALSE	canonical	3	463	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAGAAAAAAAGAAAAA	-6	True	NA	NA	False	NA	NA	NA	61470761	61417745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_61420834_61470649
transcript_53660.known	chr2	+	6574	6	FSM	ENSG00000173209.23	ENST00000394457.7	6574	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	94.3385393145346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATCAGTGGTCTCAA	18	True	NA	28	True	AATAAA	-22	NA	61177528	61191203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_53663.known	chr2	+	1971	5	FSM	ENSG00000173209.23	ENST00000471542.5	1971	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	66.2589616580278	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	1157	False	NA	11	True	NA	NA	NA	61178667	61186912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186498_61186616
transcript_53668.known	chr2	-	4452	25	FSM	ENSG00000082898.19	ENST00000677417.1	4452	25	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_24	351.564677153752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	1493	False	NA	-86	True	NA	NA	NA	61537117	61477688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537018
transcript_53669.known	chr2	-	4988	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_18	245.697801622689	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCTTGATTTACAAAC	-11	True	NA	71	True	AATGAA	-4	NA	61538356	61477848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_53670.known	chr2	-	4603	25	FSM	ENSG00000082898.19	ENST00000676553.1	4603	25	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_24	349.542667479793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	NA	False	NA	-86	True	NA	NA	NA	61538741	61477688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61538491
transcript_53676.known	chr2	-	4437	24	FSM	ENSG00000082898.19	ENST00000678081.1	4437	24	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_8	352.621722806586	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	830	False	NA	-86	True	NA	NA	NA	61537780	61477688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_53677.known	chr2	-	4184	24	FSM	ENSG00000082898.19	ENST00000676789.1	4184	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	352.359806011199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAGAACACTACTTAAAA	830	False	NA	19	True	NA	NA	NA	61537780	61477979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61478967_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_5368.known	chr1	+	2526	11	FSM	ENSG00000137996.13	ENST00000370128.9	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	24.1669195389069	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCATTATTCTCTG	-11	True	NA	21	True	AATAAA	-21	NA	100266215	100292769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100266421_100266523_100266625_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_53685.nic	chr2	-	1094	4	ISM	ENSG00000082898.19	ENST00000443240.5	565	7	277	20606	7	3455	internal_fragment	FALSE	canonical	3	1071	junction_3	44.1537717024894	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAGGAAAATAAAGAATTA	-4	True	NA	-2	True	GATAAA	-38	NA	61538349	61522611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_61522684_61526419_61526522_61533771_61533904_61537561
transcript_53686.known	chr2	-	720	3	FSM	ENSG00000082898.19	ENST00000481214.1	720	3	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_2	29.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCACCTCTGACACCAA	916	False	NA	NA	False	AATATA	-8	NA	61537694	61526066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61526522_61533771_61533904_61537561
transcript_53688.known	chr2	-	3684	6	FSM	ENSG00000170264.13	ENST00000405894.3	3684	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	11.534296684237	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAATATGGTTTTTAT	354	False	NA	-7	True	AATAAA	-17	NA	61854143	61824855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61853858
transcript_53690.known	chr2	-	3777	7	FSM	ENSG00000170264.13	ENST00000404929.6	3777	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.6612896230823	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTTTTATATACTTAC	-19	True	NA	1	True	AATAAA	-25	NA	61854060	61824847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61838537_61838706_61839420_61840582_61842121_61842361_61853858
transcript_53702.known	chr2	-	2376	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	0	0	0	multi-exon	FALSE	canonical	3	2445	junction_12	262.683241199549	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCCAGTGATTTT	-29	True	NA	-1	True	NA	NA	NA	61888656	61868084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
transcript_53711.known	chr2	-	2261	13	FSM	ENSG00000115484.15	ENST00000544079.2	2261	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	819.153153499935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGCAAATCTTACTTAAA	NA	False	NA	-41	True	AATAAA	-15	NA	61888671	61868124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61885019_61885073_61888380
transcript_53719.known	chr2	-	388	2	FSM	ENSG00000115484.15	ENST00000461370.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACGAATTGGGTGAAC	169	False	NA	-15	True	AATAAA	-19	NA	61888458	61887947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_61888258_61888380
transcript_53720.known	chr2	+	629	3	FSM	ENSG00000173163.11	ENST00000472729.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTCTACTTGCTCA	297	False	NA	19	True	ATTAAA	-16	NA	61888723	62136058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61888843_62000700_62000983_62135830
transcript_53721.known	chr2	+	911	3	FSM	ENSG00000173163.11	ENST00000311832.6	695	3	-27	-189	0	189	multi-exon	FALSE	canonical	3	383	junction_2	37	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCATGGCTCACTGCA	-6	True	NA	NA	False	ATTAAA	-41	NA	61905646	62136247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61905859_62000700_62000983_62135830
transcript_53722.known	chr2	+	604	2	FSM	ENSG00000173163.11	ENST00000471704.1	604	2	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGAATCCTTTTTCAG	-6	True	NA	NA	False	NA	NA	NA	61905646	62001092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_61905859_62000700
transcript_53725.nnic	chr2	+	3138	4	Fusion	ENSG00000173163.11_ENSG00000170340.11	novel	695	3	NA	NA	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	200.281468605227	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTGTAATGTGTAAT	-2	True	NA	20	True	AATAAA	-17	NA	61905671	62224731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_61905859_62000700_62000983_62135830_62135980_62222211
transcript_53726.known	chr2	-	1654	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.74165738677394	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTGTCTTGTGCAAT	-12	True	NA	NA	False	AATAAA	-31	NA	62506195	62500217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
transcript_53728.known	chr2	+	1311	9	FSM	ENSG00000115504.15	ENST00000405482.5	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20.2592571433407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTGGATATGAGCAAG	-44	True	NA	NA	False	CATAAA	-39	NA	62705651	62864904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730
transcript_53729.known	chr2	+	5105	23	FSM	ENSG00000115504.15	ENST00000431489.6	5105	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	22.135803614346	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	17	True	NA	15	True	AATAAA	-24	NA	62705712	63046487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
transcript_53732.known	chr2	-	4894	18	FSM	ENSG00000143951.16	ENST00000272321.12	4894	18	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	14.9864991145145	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAAAGTTTTTGCTTC	0	True	NA	-43	True	AATAAA	-19	NA	63588477	63119558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63259306_63259410_63313247_63313312_63378385_63378510_63381905_63382095_63404047_63404658_63433744_63433937_63437420_63437555_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_53739.nnic	chr2	-	1160	8	NNC	ENSG00000143951.16	novel	847	8	NA	NA	24	-1010	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37.211475078946	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTCTGAGTTATCC	8755	False	NA	0	True	ATTAAA	-19	NA	63588775	63438466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_63438624_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_53744.nnic	chr2	-	1959	3	NIC	ENSG00000143951.16	novel	754	2	NA	NA	66	720	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTATTGGCTTTTTCT	0	True	NA	-7	True	NA	NA	NA	63588733	63563454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_63564625_63571374_63571627_63588196
transcript_53750.known	chr2	+	1296	9	FSM	ENSG00000014641.21	ENST00000233114.13	1296	9	0	0	0	0	multi-exon	FALSE	canonical	3	5517	junction_6	349.887839171355	3357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCAGACTCTGTTTCT	-9	True	NA	16	True	AATAAA	-18	NA	63588962	63607197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_53753.known	chr2	+	1443	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1945.65974912753	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	6	True	NA	13	True	AATAAA	-15	NA	63589150	63607194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_53759.known	chr2	+	1346	8	FSM	ENSG00000014641.21	ENST00000421012.2	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2589.31147573392	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	6	True	NA	13	True	AATAAA	-15	NA	63589150	63607194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589385_63594487_63594587_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_5376.known	chr1	+	3101	9	FSM	ENSG00000162692.12	ENST00000294728.7	3101	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTATGTTTATTTATT	0	True	NA	NA	False	AGTAAA	-23	NA	100719741	100739045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100719925_100720475_100720752_100723019_100723341_100724623_100724891_100729106_100729383_100731197_100731519_100732417_100732685_100734501_100734769_100738122
transcript_53761.known	chr2	+	808	6	FSM	ENSG00000014641.21	ENST00000409476.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	2252.7072956778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	1	True	NA	-90	True	NA	NA	NA	63588972	63607091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_53762.known	chr2	+	893	4	FSM	ENSG00000014641.21	ENST00000485781.5	893	4	0	0	0	0	multi-exon	FALSE	canonical	3	6069	junction_3	136.238353222904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTTTTTTCTAGTTC	42	False	NA	NA	False	NA	NA	NA	63588608	63597657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398
transcript_53763.known	chr2	+	634	2	FSM	ENSG00000014641.21	ENST00000462944.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTTGTGTTATAGA	13	True	NA	NA	False	AATAAA	-29	NA	63588984	63590974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63589047_63590402
transcript_53774.known	chr2	+	2057	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1806.44199740816	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	6	True	NA	-80	True	NA	NA	NA	63840968	63891451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53776.nic	chr2	+	2256	11	NIC	ENSG00000169764.16	novel	2150	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	117	junction_1	1793.87017646205	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	676	False	NA	29	True	AATAAA	-13	NA	63841850	63891560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_63842205_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53787.known	chr2	+	1955	10	FSM	ENSG00000169764.16	ENST00000445915.6	1955	10	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_1	1460.79552992433	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTACACTGGTACTT	146	False	NA	30	True	AATAAA	-14	NA	63842324	63891561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63842438_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53806.known	chr2	+	560	5	FSM	ENSG00000169764.16	ENST00000475462.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1775.58249245142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAATCTACACTTTCA	-3	True	NA	NA	False	NA	NA	NA	63842437	63884063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63842472_63856305_63856434_63857828_63857937_63882465_63882652_63883959
transcript_53807.known	chr2	+	4397	7	FSM	ENSG00000169764.16	ENST00000475550.5	4397	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	1783.45523726651	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTACACTGGTACTTT	676	False	NA	31	True	AATAAA	-15	NA	63841850	63891562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63842205_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63890186_63891119
transcript_53808.known	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	2782	junction_1	729.256766920106	5795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	2	True	NA	29	True	AATAAA	-13	NA	63841895	63891560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53809.known	chr2	+	2105	10	FSM	ENSG00000169764.16	ENST00000394417.7	2105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	1083.09311296768	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	6	True	NA	29	True	AATAAA	-13	NA	63840968	63891560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_53812.known	chr2	+	1555	4	FSM	ENSG00000225889.10	ENST00000451350.3	1582	4	27	0	1	0	multi-exon	FALSE	canonical	3	20	junction_2	3.68178700572909	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-7	True	NA	19	True	ATTAAA	-21	NA	64228416	64252859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419
transcript_53816.nnic	chr2	+	1165	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2503	3891	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	44.8998886412873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACATAATTTTGGCTGAA	NA	False	NA	10	True	AATAAA	-21	NA	64252737	64261501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64260866
transcript_53818.nnic	chr2	+	1076	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2602	6126	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	52.5378170675393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATATAATATCTTTGTGA	43	False	NA	-55	True	TATAAA	-23	NA	64252836	64263736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64263091
transcript_53819.nnic	chr2	+	1167	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2574	6189	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	52.5378170675393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATCTCCTGGGTTGTG	15	False	NA	8	True	ACTAAA	-24	NA	64252808	64263799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64263091
transcript_5382.known	chr1	-	902	6	FSM	ENSG00000162694.14	ENST00000450240.2	902	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	154.242147287958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGATATTTGTGAAG	-2	True	NA	NA	False	NA	NA	NA	100894664	100874159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100878423_100878448_100888752_100888829_100894632
transcript_53824.nnic	chr2	+	828	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2503	2	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_2	7	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	12	True	ATTAAA	-17	NA	64252737	64257606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_64253044_64254979_64255082_64257186
transcript_53826.nnic	chr2	+	830	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2558	2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	50.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-1	True	NA	12	True	ATTAAA	-17	NA	64252792	64257606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_64253044_64254922_64255082_64257186
transcript_53828.nnic	chr2	-	1362	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCATGTGTGTTTGTTTG	-7	True	NA	2	True	NA	NA	NA	64255407	64209296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_64210167_64254915
transcript_53830.nnic	chr2	-	978	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	-7	True	NA	NA	False	AAGAAA	-45	NA	64255407	64209680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_64210167_64254915
transcript_53832.nnic	chr2	-	918	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAC	-7	True	NA	NA	False	AAAAAG	-43	NA	64255407	64209740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_64210167_64254915
transcript_53834.nnic	chr2	-	851	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAAAGAAAGA	-7	True	NA	NA	False	AAAAAG	-21	NA	64255407	64209807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_64210167_64254915
transcript_53836.nnic	chr2	-	3781	8	Fusion	ENSG00000197329.12_ENSG00000230923.2	novel	3716	7	NA	NA	-49908	-204	multi-exon	TRUE	canonical	2	16	junction_7	225.712025305137	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATTCGTCTCTGTGAGT	7	True	NA	-11	True	AGTAAA	-20	NA	64255393	64092855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64201227_64201359_64254915
transcript_53837.known	chr2	+	3856	5	FSM	ENSG00000119862.13	ENST00000238875.10	3856	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	12.747548783982	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCCAGTTTATAACAT	-2	True	NA	17	True	AATAAA	-17	NA	64454161	64461381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456287_64456466_64458284
transcript_53840.known	chr2	+	4113	10	FSM	ENSG00000119844.16	ENST00000238855.11	4113	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	40.5319566042998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTGGTG	-14	True	NA	NA	False	AATAAA	-8	NA	64524304	64592997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64581189_64581274_64585421_64585546_64591887
transcript_53841.known	chr2	+	4040	9	FSM	ENSG00000119844.16	ENST00000238856.8	4040	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	10.4992559260169	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTGGTGTCTTTGTA	-14	True	NA	NA	False	AATAAA	-16	NA	64524304	64593005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591884
transcript_53847.nic	chr2	+	2563	2	ISM	ENSG00000119844.16	ENST00000498706.5	4674	9	-201	38416	21	-38178	5prime_fragment	FALSE	canonical	3	92	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACACTTATTACCTAAT	7	True	NA	NA	False	TATAAA	-30	NA	64524325	64553718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_64524613_64551442
transcript_53848.known	chr2	-	5549	2	FSM	ENSG00000179833.4	ENST00000313349.3	5549	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCATGCTTGCAGTTT	-6	True	NA	-7	True	AATAAA	-15	NA	64653913	64631620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_64636876_64653619
transcript_53857.nnic	chr2	-	1042	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	-10	-369	-10	333	multi-exon	FALSE	canonical	3	16	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAAAAAGGTGG	-23	True	NA	NA	False	NA	NA	NA	65056205	65047520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65048213_65051278_65051338_65055914
transcript_53858.nnic	chr2	-	1064	3	NNC	ENSG00000237638.3	novel	663	3	NA	NA	0	333	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAAAAAGGTGG	-13	True	NA	NA	False	NA	NA	NA	65056195	65047520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_65048213_65055529_65055621_65055914
transcript_53859.nnic	chr2	-	671	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	-10	2	-10	-2	multi-exon	FALSE	canonical	3	16	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	-23	True	NA	-2	True	GATAAA	-17	NA	65056205	65047891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65048213_65051278_65051338_65055914
transcript_53860.nnic	chr2	-	693	3	NNC	ENSG00000237638.3	novel	663	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	-13	True	NA	-2	True	GATAAA	-17	NA	65056195	65047891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_65048213_65055529_65055621_65055914
transcript_53861.known	chr2	-	608	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	63	0	5	0	multi-exon	FALSE	canonical	3	30	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTCACTAGGTAAAGG	19	True	NA	36	True	AATAGA	-3	NA	65056163	65047853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65048213_65055914
transcript_53864.known	chr2	+	5343	7	FSM	ENSG00000011523.14	ENST00000260569.4	5343	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.5919329785103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	38	False	NA	7	True	AATAAA	-16	NA	65056464	65087004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_65056529_65069398_65069802_65071453_65072570_65074281_65074405_65077867_65077965_65082535_65082710_65083638
transcript_53865.known	chr2	+	5803	7	FSM	ENSG00000011523.14	ENST00000377990.7	5803	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	28.0381684296405	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	-11	True	NA	7	True	AATAAA	-16	NA	65056415	65087004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281_65074405_65077867_65077965_65082535_65082710_65083638
transcript_5387.known	chr1	-	2825	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	41.7933906257915	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-2	True	NA	-25	True	AATAAA	-15	NA	100894842	100872390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
transcript_53871.known	chr2	-	2448	6	FSM	ENSG00000138069.18	ENST00000409784.8	2448	6	0	0	0	0	multi-exon	FALSE	canonical	3	1288	junction_4	75.7083879104555	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGGCGTGCTTGGTGGA	6	True	NA	NA	False	AATAAA	-20	NA	65130106	65086853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65097970_65098067_65104733_65104807_65129892
transcript_53877.known	chr2	-	1333	5	FSM	ENSG00000138069.18	ENST00000409751.1	1333	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_3	592.711776498493	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	8	True	NA	-12	True	AATAAA	-29	NA	65130104	65087870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65104733_65104807_65129892
transcript_5388.known	chr1	-	2835	5	FSM	ENSG00000162694.14	ENST00000370113.7	2835	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	119.742431911165	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTGTGTTAACTAAG	-16	True	NA	-21	True	AATAAA	-19	NA	100894812	100872386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888865_100894632
transcript_53883.known	chr2	-	2254	4	FSM	ENSG00000138069.18	ENST00000409892.5	2254	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	617.017737904583	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGGCGTGCTTGGTGG	7	True	NA	NA	False	AATAAA	-19	NA	65130105	65086854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65088938_65089071_65104733_65104807_65129892
transcript_53884.known	chr2	-	1198	4	FSM	ENSG00000138069.18	ENST00000398529.7	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	606.007150672883	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	11	True	NA	-12	True	AATAAA	-29	NA	65130101	65087870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_65088691_65097970_65098067_65104733_65104807_65129892
transcript_53891.known	chr2	+	2685	10	FSM	ENSG00000138071.15	ENST00000377982.8	2685	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	444.237535170455	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTAATTACAAAATACAAG	12	True	NA	NA	False	AATAAA	-15	NA	65227836	65270146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_65227958_65239851_65239963_65242048_65242064_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_53892.known	chr2	+	3783	9	FSM	ENSG00000138071.15	ENST00000260641.10	3783	9	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_6	64.4534715899772	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTGTCATTTCTT	6	True	NA	21	True	AATAAA	-22	NA	65227830	65271253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_65227958_65239851_65239963_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_53906.nnic	chr2	-	1121	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63899	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	7.32621794569033	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAAATGCTGAAATA	NA	False	NA	-39	True	TTTAAA	-2	NA	67334081	67175187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325084_67325233_67333984
transcript_53908.nnic	chr2	-	812	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63899	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	7.32621794569033	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATTTGAAATGATTTGA	NA	False	NA	-15	True	AATAAA	-16	NA	67334081	67175496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325084_67325233_67333984
transcript_53911.known	chr2	+	4948	6	FSM	ENSG00000143971.9	ENST00000272342.6	4948	6	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	23.5202040807473	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	10	True	NA	-21	True	NA	NA	NA	67397332	67412089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
transcript_53913.nnic	chr2	-	1261	6	NIC	ENSG00000197223.12	novel	1379	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	194.107805098095	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTGACCTGTGTATTT	-19	True	NA	-10	True	AATAAA	-15	NA	68063013	68042208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68053060_68053138_68062944
transcript_53914.known	chr2	-	772	6	FSM	ENSG00000197223.12	ENST00000409302.1	772	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	204.541829462827	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATTTACCATCTCT	-15	True	NA	NA	False	NA	NA	NA	68063009	68042676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047316_68053060_68053138_68062957
transcript_53916.known	chr2	-	2233	5	FSM	ENSG00000197223.12	ENST00000355848.7	2233	5	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_4	131.287851684762	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	11	True	NA	NA	False	TTTAAA	-35	NA	68062983	68041129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062944
transcript_53917.known	chr2	-	2241	5	FSM	ENSG00000197223.12	ENST00000410067.8	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	84.6492764292761	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	-10	True	NA	NA	False	TTTAAA	-35	NA	68063004	68041129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062957
transcript_5392.known	chr1	-	3146	4	FSM	ENSG00000162694.14	ENST00000535414.5	3146	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	150.645278717921	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGACTCATGTTTTT	-17	True	NA	-6	True	AATAAA	-34	NA	100895179	100872371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100874431_100877475_100877904_100888752_100888865_100894632
transcript_53922.nic	chr2	-	1536	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	-60	1115	-38	840	multi-exon	FALSE	canonical	3	113	junction_7	11.0176111340908	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTGGACTTGAA	NA	False	NA	NA	False	NA	NA	NA	68157587	68130919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_53925.known	chr2	-	2591	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	11.0176111340908	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-11	True	NA	50	True	AATAAA	-19	NA	68157527	68129804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_53926.known	chr2	-	1517	7	FSM	ENSG00000243667.7	ENST00000409164.1	1517	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	9.71968220788222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAGTTAATGGTATTTC	34	True	NA	NA	False	ATTAAA	-14	NA	68157482	68134089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_5393.nnic	chr1	-	2756	4	NIC	ENSG00000162694.14	novel	2825	5	NA	NA	-7	0	combination_of_known_splicesites	TRUE	canonical	3	15	junction_3	158.330877173932	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-9	True	NA	-25	True	AATAAA	-15	NA	100894849	100872390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_100874431_100876793_100876865_100877475_100877904_100894632
transcript_53930.known	chr2	+	2242	7	FSM	ENSG00000115946.8	ENST00000263657.7	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_6	54.8859929510456	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGCATCTCTAAAACC	-19	True	NA	13	True	ATTAAA	-18	NA	68157887	68176238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_68158142_68158379_68158530_68161682_68161767_68162264_68162326_68162545_68162664_68173346_68173418_68174734
transcript_53939.known	chr2	-	3024	6	FSM	ENSG00000221823.11	ENST00000234310.8	3024	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	7.1442284397967	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTATTCAGTGGTC	-15	True	NA	-11	True	AATAAA	-15	NA	68252532	68178856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68181011_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252124
transcript_5394.known	chr1	-	678	2	FSM	ENSG00000162694.14	ENST00000480774.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCCATTCATCTGTCA	-9	True	NA	NA	False	NA	NA	NA	100894805	100888323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100888829_100894632
transcript_53940.known	chr2	+	979	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGGTTCCTGTCTCTC	1268	False	NA	NA	False	AATAAA	-23	NA	68252869	68253848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_68252900_68253800
transcript_53941.known	chr2	-	644	3	FSM	ENSG00000119865.9	ENST00000409559.7	644	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGGTTTACTCACTGT	48	True	NA	NA	False	ATTAAA	-16	NA	68319400	68284170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68284485_68317156_68317308_68319221
transcript_53942.known	chr2	-	1896	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGACTTGCATTCTTA	17	True	NA	-1	True	AATAAA	-15	NA	68319949	68293009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68294027_68317156_68317308_68319221
transcript_53943.known	chr2	-	5699	4	FSM	ENSG00000204923.4	ENST00000377957.4	5699	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTATTATTTTGAATTA	-9	True	NA	-15	True	AATAAA	-17	NA	68467294	68459421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_68464371_68464839_68465179_68466143_68466471_68467210
transcript_53950.known	chr2	+	1126	13	FSM	ENSG00000169604.21	ENST00000482235.2	1126	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	31.4124665627447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATGATTTGTGCT	77	False	NA	NA	False	TATAAA	-17	NA	69013499	69135169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69134994
transcript_53951.known	chr2	+	2221	13	FSM	ENSG00000169604.21	ENST00000409829.7	2221	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_12	22.4739046204457	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGTTGATACTTAGGC	18	False	NA	8	True	AATAAA	-12	NA	69013305	69146401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145325
transcript_53953.known	chr2	+	1449	10	FSM	ENSG00000169604.21	ENST00000463335.2	1449	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	4.99876527964533	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGATTCTGCAGCTTT	0	True	NA	18	True	AATAAA	-27	NA	69013356	69103444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841
transcript_53955.known	chr2	-	8632	19	FSM	ENSG00000198380.13	ENST00000361060.5	8632	19	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_4	58.8591119685677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTATTAATTTACTT	5	True	NA	-11	True	AATAAA	-13	NA	69387248	69319779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69326234_69326913_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_53959.nic	chr2	-	877	8	ISM	ENSG00000198380.13	ENST00000674507.1	5906	18	-74	32210	-12	9123	5prime_fragment	FALSE	canonical	3	580	junction_3	57.2006850251545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTACCTCTACAAATG	-9	True	NA	NA	False	CATAAA	-39	NA	69387262	69354487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_5396.known	chr1	+	429	1	FSM	ENSG00000273204.1	ENST00000609247.1	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTTAACAGCCTTTAT	13	False	NA	8	True	ATTAAA	-17	NA	100894927	100895356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100894900_100895400
transcript_53960.nnic	chr2	-	970	9	NNC	ENSG00000169599.13	novel	898	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	142.575418638698	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	7	True	NA	-27	True	AATAAA	-23	NA	69437456	69396125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_69396291_69399560_69399612_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
transcript_53961.known	chr2	-	1034	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	118.802185096376	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTTGCTTTACC	540	False	NA	-21	True	AATAAA	-29	NA	69437475	69396119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
transcript_53962.known	chr2	-	898	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_5	22.0315173127509	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	4	True	NA	-27	True	AATAAA	-23	NA	69437435	69396125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
transcript_53964.nic	chr2	-	766	7	NIC	ENSG00000169599.13	novel	898	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	119.438617428926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	0	True	NA	-27	True	AATAAA	-23	NA	69437439	69396125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_53965.known	chr2	-	453	2	FSM	ENSG00000115977.21	ENST00000492192.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTAGAAACCATC	112	False	NA	NA	False	AAGAAA	-37	NA	69643845	69643092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69643275_69643574
transcript_53968.known	chr2	+	1414	13	FSM	ENSG00000196975.16	ENST00000409920.5	1414	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	41.8876639225547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTACTTTGTGT	-2	True	NA	9	True	AATAAA	-23	NA	69741973	69825781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806433_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_53971.known	chr2	+	2651	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	25.7826114960365	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGAATACTTGCCTTT	0	True	NA	NA	False	ATTAAA	-35	NA	69742133	69827112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_53980.known	chr2	+	4161	14	FSM	ENSG00000087338.5	ENST00000282570.4	4161	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_8	37.9724284902057	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGAAAGCTTTGTG	-13	True	NA	4	True	AATAAA	-37	NA	69829659	69881384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69830153_69837546_69837671_69839456_69839554_69840941_69841040_69843148_69843262_69844130_69844197_69847542_69847628_69849651_69849743_69854822_69854961_69861277_69861348_69864899_69864976_69869718_69869865_69871744_69871833_69878908
transcript_53990.known	chr2	+	766	7	FSM	ENSG00000124380.11	ENST00000450162.6	766	7	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_6	148.531422040366	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGATAAATATTTTTAT	7	True	NA	10	True	AATAAA	-21	NA	69893963	69904671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253_69904426_69904511
transcript_53991.known	chr2	+	1425	6	FSM	ENSG00000124380.11	ENST00000244227.8	1425	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	20.4215572373901	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATGTTTCATTA	-1	True	NA	14	True	ATTAAA	-33	NA	69893955	69905236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253
transcript_53998.known	chr2	+	1339	5	FSM	ENSG00000124380.11	ENST00000409116.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.154083570604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCATTACATACATA	2	True	NA	-4	True	ATTAAA	-15	NA	69893958	69905218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69904253
transcript_54.known	ERCC-00157	+	1003	1	FSM	ERCC-00157A	DQ839618	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00157_+_0_1000
transcript_540.known	chr1	+	8314	23	FSM	ENSG00000171735.19	ENST00000303635.12	8314	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1306.09049463094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGTGTGTGTTTTGCTTT	-16	True	NA	19	True	ATTAAA	-22	NA	6785453	7769706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_7091303_7091372_7249490_7249627_7467829_7467902_7640399_7640554_7661725_7661867_7663352_7665200_7670910_7671038_7677598_7677734_7732447_7732600_7736343_7736541_7736930_7737010_7737254_7737571_7737958_7738483_7744834_7745023_7745844_7746092_7747709_7747782_7751198_7751393_7752458_7752534_7755637_7755669_7766458
transcript_5400.known	chr1	+	7898	12	FSM	ENSG00000162695.12	ENST00000370112.8	7898	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	23.6615250690872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGAATTGTGTCTTA	-31	True	NA	8	True	AATAAA	-18	NA	100896075	100981753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809_100974903_100975218
transcript_54005.known	chr2	-	2259	7	FSM	ENSG00000179818.16	ENST00000653289.1	2259	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	8.83962040411741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTCTGTTGTTTTAAG	3	True	NA	-26	True	NA	NA	NA	70086273	70048709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70050253_70051202_70051306_70055713_70055911_70059642_70059681_70083537_70083688_70085546_70085625_70086123
transcript_54010.known	chr2	-	1498	6	FSM	ENSG00000179818.16	ENST00000664533.1	1498	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.36867333123626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGAGGGAGGGGGGAG	8305	False	NA	NA	False	NA	NA	NA	70087014	70049207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70050253_70051202_70051306_70055713_70055911_70059642_70059681_70085546_70085625_70086977
transcript_54016.known	chr2	-	546	5	FSM	ENSG00000179818.16	ENST00000425333.5	546	5	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	14.9227175809234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACCCTGAACATTTCAT	7976	False	NA	NA	False	NA	NA	NA	70087343	70031752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70087280
transcript_54024.known	chr2	-	1958	4	FSM	ENSG00000179818.16	ENST00000667307.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	20.0055547841649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAGGGAGCATGGCCC	7945	False	NA	-94	True	NA	NA	NA	70087374	70048777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70050253_70051202_70051306_70085546_70085625_70087072
transcript_54026.known	chr2	-	1985	5	FSM	ENSG00000179818.16	ENST00000657164.1	1985	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	11.202678251204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTCACACAGCTAATAAA	3	True	NA	NA	False	NA	NA	NA	70086273	70045292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70046797_70051202_70051306_70083537_70083688_70085546_70085625_70086123
transcript_54027.known	chr2	-	1543	1	FSM	ENSG00000244617.3	ENST00000320256.6	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAATGTGTTGATTGA	-1	True	NA	2	True	AATAAA	-19	NA	69961631	69960088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_69960100_69961600
transcript_54028.known	chr2	+	1727	1	FSM	ENSG00000169564.7	ENST00000303577.7	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	838	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGGTGCCTTTTT	-3	True	NA	61	True	AAAAAG	-21	NA	70087476	70089203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_70087500_70089200
transcript_54029.known	chr2	-	662	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	15	2	15	0	multi-exon	FALSE	canonical	3	40	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	1	True	NA	0	True	AAAAAG	-18	NA	70125317	70124035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70124426_70125045
transcript_54037.known	chr2	-	3823	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	126.124938057467	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-3	True	NA	-8	True	ATTAAA	-22	NA	70248580	70210203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_5404.known	chr1	+	8204	11	FSM	ENSG00000162695.12	ENST00000357650.9	8204	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	18.5698680663057	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATTGTGTCTTATCAG	-17	True	NA	12	True	AATAAA	-22	NA	100896089	100981757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809
transcript_54048.known	chr2	-	4633	12	FSM	ENSG00000116001.17	ENST00000415783.6	4633	12	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_8	133.50030179184	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-28	True	NA	0	True	AATAAA	-25	NA	70248660	70209443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_54061.nic	chr2	-	2564	10	NIC	ENSG00000115998.8	novel	2524	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	11.8675821536166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	11	True	NA	NA	False	AATAAA	-24	NA	70191004	70149884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190917
transcript_54062.known	chr2	-	2524	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	8.47800349197124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-4	True	NA	NA	False	AATAAA	-24	NA	70191019	70149884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
transcript_54067.nnic	chr2	-	2438	9	NIC	ENSG00000115998.8	novel	2524	10	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	11.3660679216693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-19	True	NA	NA	False	AATAAA	-24	NA	70191034	70149884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_70150565_70160624_70160788_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
transcript_54070.known	chr2	-	821	8	FSM	ENSG00000116001.17	ENST00000416149.6	821	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_3	64.280317233765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGACATTCGTGGGG	9712	False	NA	NA	False	ATTAAA	-18	NA	70248454	70216671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_54073.nic	chr2	-	858	7	ISM	ENSG00000116001.17	ENST00000416149.6	821	8	-230	7752	-24	0	5prime_fragment	FALSE	canonical	3	344	junction_2	69.4278202323984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	6	True	NA	-7	True	AATAAA	-15	NA	70248684	70224423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_54075.nic	chr2	-	879	6	ISM	ENSG00000116001.17	ENST00000445587.5	1440	10	-128	12107	-78	0	5prime_fragment	FALSE	canonical	3	72	junction_2	170.806791434064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	9428	False	NA	-7	True	AATAAA	-15	NA	70248738	70224423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_54079.known	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	38.160712781603	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	12	True	NA	14	True	AATAAA	-15	NA	70258136	70281185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
transcript_54083.known	chr2	-	428	4	FSM	ENSG00000143977.14	ENST00000449935.6	428	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	3292.93074462384	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	9290	False	NA	-77	True	AATAAA	-17	NA	70292776	70281506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70292674
transcript_54084.known	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4036	junction_2	1853.69852517129	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-16	True	NA	-1	True	ATTAAA	-38	NA	70293740	70281361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
transcript_54087.known	chr2	-	566	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	3884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTCCTTCTGTCCATC	-16	True	NA	-6	True	ATTAAA	-33	NA	70293740	70281366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70281685_70288067_70288193_70293617
transcript_54089.known	chr2	-	393	3	FSM	ENSG00000143977.14	ENST00000488400.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	4036	junction_1	106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGCAGTTACTCAGCT	-6	True	NA	NA	False	NA	NA	NA	70293730	70287935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70288193_70289349_70289373_70293617
transcript_54090.known	chr2	-	527	5	FSM	ENSG00000143977.14	ENST00000454893.1	527	5	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	2017.79748426347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	13	True	NA	-77	True	AATAAA	-17	NA	70293711	70281506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70281685_70287264_70287372_70288067_70288193_70289349_70289373_70293617
transcript_54091.known	chr2	-	936	4	FSM	ENSG00000035141.8	ENST00000450256.1	936	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1064.45009277091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCCTGTAACAAGCCAGA	10	True	NA	NA	False	NA	NA	NA	70302056	70297010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70300981_70301407_70301604_70301924
transcript_54094.known	chr2	-	2107	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_2	1131	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-1	True	NA	-3	True	AATAAA	-22	NA	70302067	70295975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70300981_70301603
transcript_54095.known	chr2	-	518	3	FSM	ENSG00000035141.8	ENST00000438759.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	1130.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTGGGAGTAAGGAG	72	False	NA	-98	True	NA	NA	NA	70301994	70297425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70300981_70301669
transcript_54096.known	chr2	-	1810	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	2222	junction_2	34.5	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTCTTCTTTCCTTA	NA	False	NA	-2	True	AATAAA	-23	NA	70302090	70295974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70300981_70301924
transcript_54097.known	chr2	-	2398	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	1114.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	10	True	NA	-3	True	AATAAA	-22	NA	70302056	70295975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70297478_70300839_70301604_70301924
transcript_54098.known	chr2	-	2654	17	FSM	ENSG00000075340.23	ENST00000355733.7	2654	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	43.6247761455575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGAACCCCCTCCTTCC	14	True	NA	-50	True	AAAAAG	-3	NA	70768177	70663482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70663736_70672877_70673007_70673240_70673327_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_5410.known	chr1	-	1143	8	FSM	ENSG00000117543.22	ENST00000342173.11	1143	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	89.4792188848612	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATGGTTTTATAAGT	-2	True	NA	NA	False	NA	NA	NA	101025763	100990223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990629_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
transcript_54101.known	chr2	-	9290	16	FSM	ENSG00000075340.23	ENST00000264436.9	9290	16	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_10	12.3486391512947	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCCCCATCTCTG	-9	True	NA	-13	True	AGTAAA	-22	NA	70768200	70656783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_54104.known	chr2	-	3776	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	11.6054943884352	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	89	False	NA	-9	True	AATAAA	-16	NA	70768212	70675092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_54108.nic	chr2	+	1222	10	NIC	ENSG00000124357.13	novel	1801	10	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	76.7281556962189	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	NA	False	NA	22	True	AATAAA	-22	NA	71068253	71078641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_71068337_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_54112.known	chr2	+	2371	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	17.8885438199983	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTCTACTCCCCTC	0	True	NA	NA	False	AATAAA	-15	NA	71068647	71079808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_54121.known	chr2	+	2343	9	FSM	ENSG00000124357.13	ENST00000418807.7	2343	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	82.3634286258167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTTGTCTACTCCC	-7	True	NA	NA	False	AATAAA	-12	NA	71068587	71079805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_54129.known	chr2	+	878	7	FSM	ENSG00000124357.13	ENST00000443872.6	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	92.4602016485411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTTTACAAAAACAAAC	-3	True	NA	-34	True	NA	NA	NA	71068591	71078585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_54133.known	chr2	-	3365	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	9.69535971483266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-23	True	NA	NA	False	AATAAA	-16	NA	70994873	70985941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
transcript_54136.known	chr2	-	758	5	FSM	ENSG00000144043.12	ENST00000433258.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	51.9681392778306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCAGTCCTCCCCTGT	18	True	NA	NA	False	NA	NA	NA	70994832	70988353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70993695_70993776_70994687
transcript_54137.known	chr2	+	1198	3	FSM	ENSG00000205847.6	ENST00000642062.1	1198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGGGCAAGCACATTA	NA	False	NA	NA	False	NA	NA	NA	71024126	71029893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71024201_71024305_71024452_71028915
transcript_54138.known	chr2	+	1221	10	FSM	ENSG00000124357.13	ENST00000443938.6	1221	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.7627221182559	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	8	False	NA	22	True	AATAAA	-22	NA	71068618	71078641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077569_71077637_71078317
transcript_5414.known	chr1	-	1034	8	FSM	ENSG00000117543.22	ENST00000488176.1	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	89.9378470196536	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTTGGATGTATCCC	16	True	NA	NA	False	NA	NA	NA	101025767	100990357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025664
transcript_54140.nnic	chr2	-	1415	4	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-22	0	intron_retention	FALSE	canonical	2	9	junction_1	9.17726659862414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-18	True	NA	-14	True	AATAAA	-15	NA	71130261	71109686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71110762_71110859_71124205_71124544_71129716
transcript_54141.nnic	chr2	-	927	4	NNC	ENSG00000124370.11	novel	824	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.1457478270519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	14	True	NA	-14	True	AATAAA	-15	NA	71130229	71109686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_71110123_71124205_71124544_71129716_71129820_71130179
transcript_54142.nnic	chr2	-	2066	3	NIC	ENSG00000124370.11	novel	499	3	NA	NA	-22	8	intron_retention	FALSE	canonical	3	16	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGTAATGTGTTAGCT	-18	True	NA	-3	True	AATAAA	-26	NA	71130261	71109675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110859_71124205_71124544_71129716
transcript_54143.nic	chr2	-	697	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	32.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTAATTGAATGTAATG	-18	True	NA	-11	True	AATAAA	-18	NA	71130261	71109683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71124367_71124544_71130179
transcript_54144.nic	chr2	-	1319	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-22	0	intron_retention	FALSE	canonical	3	31	junction_2	36	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-18	True	NA	-14	True	AATAAA	-15	NA	71130261	71109686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71124205_71124544_71129716
transcript_54145.known	chr2	-	824	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	14	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	14	True	NA	-14	True	AATAAA	-15	NA	71130229	71109686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_71110123_71124205_71124544_71130179
transcript_54146.nic	chr2	-	1196	3	NIC	ENSG00000124370.11	novel	499	3	NA	NA	-22	4	intron_retention	FALSE	canonical	3	31	junction_2	36	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGTATATTATTTAG	-18	True	NA	NA	False	ATTAAA	-22	NA	71130261	71109809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_71110123_71124205_71124544_71129716
transcript_54150.known	chr2	+	2164	11	FSM	ENSG00000124383.9	ENST00000244230.7	2164	11	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	31.9795246994073	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	-4	True	NA	16	True	AATAAA	-17	NA	71130633	71150101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222_71149454_71149865
transcript_54155.nic	chr2	+	2086	10	ISM	ENSG00000124383.9	ENST00000244230.7	2164	11	-324	814	-322	0	5prime_fragment	FALSE	canonical	3	279	junction_4	33.1695978604237	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAAGGAAAAAGAAATATC	-22	True	NA	-18	True	TATAAA	-40	NA	71130309	71149287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222
transcript_54158.known	chr2	+	2068	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	17.6971042829046	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCATCTCATTGACT	-6	True	NA	NA	False	ATTAAA	-21	NA	71130631	71139425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
transcript_5416.known	chr1	-	894	7	FSM	ENSG00000117543.22	ENST00000498372.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	122.829715007765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCATCTTGAATTTT	487	False	NA	NA	False	NA	NA	NA	101025755	100990333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025664
transcript_54162.nic	chr2	+	1013	2	ISM	ENSG00000124383.9	ENST00000498451.2	2068	5	-322	5960	-322	297	5prime_fragment	FALSE	canonical	3	321	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAACGAAAAGATGA	-22	True	NA	NA	False	AAAACA	-9	NA	71130309	71133465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_71130755_71132897
transcript_54164.known	chr2	-	6300	4	FSM	ENSG00000124374.9	ENST00000244221.9	6300	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	17.5562587763516	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCAGTGGTACCCT	-20	True	NA	-26	True	AATAAA	-13	NA	71227103	71182737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_71188536_71189844_71190022_71202451_71202601_71226927
transcript_54165.nnic	chr2	-	700	4	NNC	ENSG00000124374.9	novel	6300	4	NA	NA	-3	-5568	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	92.9169282507529	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGAGTATTTCTATTT	-23	True	NA	-30	True	NA	NA	NA	71227106	71188305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_71188536_71189844_71190022_71202451_71202601_71226962
transcript_5417.known	chr1	-	1047	7	FSM	ENSG00000117543.22	ENST00000464270.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	96.0601663310842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGGTTTTATAAGTG	4	True	NA	NA	False	NA	NA	NA	101025815	100990222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025682
transcript_54171.nic	chr2	+	3630	21	ISM	ENSG00000075292.19	ENST00000264447.9	6487	28	-52	16439	2	-7984	5prime_fragment	TRUE	canonical	3	168	junction_1	78.4860497158571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAGAAAAAGAAAGGTA	NA	False	NA	2	True	AATAAA	-40	NA	71331729	71418622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601
transcript_54172.nic	chr2	+	3604	21	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	-14	-7984	combination_of_known_junctions	FALSE	canonical	3	216	junction_1	71.2947403389619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAGAAAAAGAAAGGTA	NA	False	NA	2	True	AATAAA	-40	NA	71331745	71418622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_71331866_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601
transcript_54175.nic	chr2	+	3586	13	NIC	ENSG00000075292.19	novel	6487	28	NA	NA	2	84	combination_of_known_junctions	FALSE	canonical	3	48	junction_10	189.513558588532	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTGTGTACTTT	NA	False	NA	13	True	NA	NA	NA	71331729	71395754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
transcript_54190.nnic	chr2	+	3164	9	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	196.97699738802	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_71417244_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_54193.known	chr2	+	3518	13	FSM	ENSG00000075292.19	ENST00000410075.5	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	191.515157508631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCGGCTCCAGCTTATC	7	True	NA	1	True	AATAAA	-2	NA	71276592	71395670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
transcript_54196.nic	chr2	+	2542	8	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	-14	4255	combination_of_known_junctions	FALSE	canonical	3	216	junction_1	96.7373890953213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGTGTGAAAATATG	NA	False	NA	8	True	GATAAA	-2	NA	71331745	71369960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_71331866_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_54197.nnic	chr2	+	1939	8	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	270.441966312289	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_71417244_71418601_71418640_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_54203.nnic	chr2	+	918	6	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	306.162309894605	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_71417244_71418601_71418640_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_54207.known	chr2	-	4016	14	FSM	ENSG00000144040.13	ENST00000272433.7	4016	14	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	38.6506121877158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	9	True	NA	-2	True	AATAAA	-17	NA	73071712	72942035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_54208.known	chr2	-	840	12	FSM	ENSG00000144040.13	ENST00000410065.5	840	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	59.9870509442808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCAGCGGCCTGGGG	-3	True	NA	NA	False	NA	NA	NA	73071724	72945021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_72945100_72961130_72961249_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_54211.nic	chr2	-	1221	6	ISM	ENSG00000144040.13	ENST00000416579.5	895	11	-49	46266	-49	0	5prime_fragment	FALSE	canonical	3	177	junction_4	22.9381777829016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	9097	False	NA	NA	False	NA	NA	NA	73071777	73019446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_54213.nic	chr2	-	2246	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-49	1189	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	106.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCTCACTGTTTTTCCT	9097	False	NA	NA	False	AATAAA	-13	NA	73071777	73047896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_54214.nic	chr2	-	1057	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	106.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	9097	False	NA	NA	False	TATAAA	-30	NA	73071777	73049085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_54215.nic	chr2	-	882	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-49	-175	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	106.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCCTCTTGCCGTTC	9097	False	NA	NA	False	AATAAA	-17	NA	73071777	73049260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_54216.known	chr2	-	351	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	86	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTTGCTGACTGTT	9212	False	NA	-1	True	AATAAA	-39	NA	73071662	73053328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73053552_73058527_73058597_73071603
transcript_54217.known	chr2	-	895	11	FSM	ENSG00000144040.13	ENST00000416579.5	895	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.4096146438992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCCTCCTGCTTTTCTT	-7	True	NA	NA	False	AATACA	-14	NA	73071728	72973180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_72973428_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_54218.nic	chr2	+	2668	13	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	68.829650829663	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	NA	False	NA	30	True	AATAAA	-14	NA	73214229	73227221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73214363_73218860_73218970_73219951_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_54219.known	chr2	+	2554	13	FSM	ENSG00000135632.12	ENST00000389501.9	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	23.4003501873132	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	-8	True	NA	30	True	AATAAA	-14	NA	73214244	73227221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_5422.known	chr1	-	948	7	FSM	ENSG00000117543.22	ENST00000466807.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	101.994553231478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTCATAATTCCCAGG	12	True	NA	NA	False	NA	NA	NA	101025771	100990314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025639
transcript_54221.nic	chr2	+	2550	13	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	69.3523111046456	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	NA	False	NA	30	True	AATAAA	-14	NA	73214229	73227221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73214363_73218860_73218970_73220069_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_54228.nnic	chr2	+	2568	11	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	12	junction_10	74.8441046442537	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	NA	False	NA	30	True	AATAAA	-14	NA	73214229	73227221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73225630
transcript_54231.known	chr2	-	1090	5	FSM	ENSG00000135617.4	ENST00000258083.3	1090	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	13.729530217746	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGTGTCCTAGAATAA	2	True	NA	-9	True	AATAAA	-42	NA	73233239	73228009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73228575_73228794_73228963_73229460_73229571_73230112_73230214_73233093
transcript_54235.known	chr2	+	2031	13	FSM	ENSG00000135624.17	ENST00000539919.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1314.8033017232	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	780	False	NA	-12	True	AATAAA	-30	NA	73234235	73253021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_54244.known	chr2	+	1847	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	0	0	0	0	multi-exon	FALSE	canonical	3	3200	junction_5	259.388569046645	7471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTTTGTAAATTATTT	-1	True	NA	25	True	AATAAA	-14	NA	73234307	73253005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_54266.known	chr2	+	1674	10	FSM	ENSG00000135624.17	ENST00000540468.5	1674	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	1075.64689694787	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	780	False	NA	-12	True	AATAAA	-30	NA	73234235	73253021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_54272.known	chr2	+	1234	7	FSM	ENSG00000135624.17	ENST00000398422.2	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1329.56091331771	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	-1	True	NA	24	True	AATAAA	-13	NA	73234307	73253004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73234385_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_54277.known	chr2	-	816	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	425.898109880755	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	NA	False	NA	NA	False	ATTAAA	-17	NA	73737400	73729889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
transcript_54283.known	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_4	179.769991934138	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-1	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_54284.nic	chr2	-	615	5	NIC	ENSG00000144034.16	novel	819	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	389.753126991946	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	NA	False	NA	NA	False	ATTAAA	-17	NA	73737412	73729889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_73730030_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_54287.known	chr2	-	798	4	FSM	ENSG00000144034.16	ENST00000497464.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_3	198.415389188104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGAAATTTGGTTTTT	4	True	NA	-7	True	AATAAA	-19	NA	73737340	73730263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73730737_73732162_73732286_73734428_73734592_73737301
transcript_54289.known	chr2	-	575	5	FSM	ENSG00000144034.16	ENST00000463231.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	433.049073431638	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTGGTGATTTTA	4	True	NA	NA	False	TTTAAA	-2	NA	73737375	73729168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_5429.nic	chr1	-	1563	7	NIC	ENSG00000117543.22	novel	1768	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	95.6127897070029	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	119	False	NA	-24	True	ATTAAA	-16	NA	101026123	100990062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_100990632_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
transcript_54290.known	chr2	-	1653	9	FSM	ENSG00000144048.10	ENST00000272444.7	1653	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	14.8318702461962	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGGTATTTTTGTG	NA	False	NA	1	True	NA	NA	NA	73780157	73762183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73762860_73766417_73766595_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_54293.nic	chr2	-	2747	4	ISM	ENSG00000144048.10	ENST00000443070.5	2175	6	-28	4242	8	1592	5prime_fragment	FALSE	canonical	3	230	junction_2	17.2497987105808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGGCATGGTGGCGG	NA	False	NA	NA	False	AATACA	-15	NA	73780149	73771660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_73773924_73774912_73775045_73778300_73778377_73779873
transcript_54297.known	chr2	+	2040	13	FSM	ENSG00000124356.17	ENST00000682379.1	2040	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	144.761777490546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCTTTTTCTTTTGTGT	13	True	NA	NA	False	ATTAAA	-25	NA	73828986	73873659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73870142_73870353_73873351
transcript_54298.known	chr2	+	2144	12	FSM	ENSG00000124356.17	ENST00000682799.1	2144	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	148.447892741878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAACAATTAACTTATG	9	True	NA	9	True	AATAAA	-28	NA	73828982	73862866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73860533_73860590_73862202
transcript_54299.known	chr2	+	1880	12	FSM	ENSG00000124356.17	ENST00000683852.1	1880	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	148.794772413283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	13	True	NA	NA	False	NA	NA	NA	73828986	73873601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_5430.known	chr1	+	1268	6	FSM	ENSG00000233184.8	ENST00000454721.7	1382	6	35	79	-2	-4	multi-exon	FALSE	canonical	1	1	junction_2	5.08330601085553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGCATGGCCGATGG	2	True	NA	-68	True	ATTAAA	-18	NA	101025884	101087189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101072659_101072831_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_54300.known	chr2	+	6316	11	FSM	ENSG00000124356.17	ENST00000684585.1	6316	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	117.519360107176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-7	True	NA	3	True	AATAAA	-16	NA	73828966	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54302.known	chr2	+	6145	11	FSM	ENSG00000124356.17	ENST00000683928.1	6145	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	122.195580934828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	3	True	NA	3	True	AATAAA	-16	NA	73829030	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54303.known	chr2	+	6315	11	FSM	ENSG00000124356.17	ENST00000683391.1	6315	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	128.120099906299	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	5	False	NA	3	True	AATAAA	-16	NA	73829032	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845175_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54304.known	chr2	+	6516	11	FSM	ENSG00000124356.17	ENST00000682784.1	6516	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	123.189122896464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	15	True	NA	3	True	AATAAA	-16	NA	73828988	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54306.known	chr2	+	6053	10	FSM	ENSG00000124356.17	ENST00000683149.1	6053	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	148.508136701888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-31	True	NA	3	True	AATAAA	-16	NA	73828942	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54307.known	chr2	+	6207	10	FSM	ENSG00000124356.17	ENST00000683434.1	6207	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	153.101112397278	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-7	True	NA	3	True	AATAAA	-16	NA	73828966	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847389_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54309.known	chr2	+	6403	10	FSM	ENSG00000124356.17	ENST00000684337.1	6403	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	149.889177167996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	NA	False	NA	3	True	AATAAA	-16	NA	73828921	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54311.known	chr2	+	6261	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	112.631925391001	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	16	True	NA	3	True	AATAAA	-16	NA	73828989	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54312.known	chr2	+	6019	9	FSM	ENSG00000124356.17	ENST00000682851.1	6019	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	128.841411723871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-31	True	NA	3	True	AATAAA	-16	NA	73828942	73867152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_54315.nic	chr2	+	578	5	ISM	ENSG00000124356.17	ENST00000536064.2	1997	13	4	17546	2	-365	5prime_fragment	FALSE	canonical	3	187	junction_1	70.272238472956	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTCAGTATATAACA	6	True	NA	NA	False	AATATA	-15	NA	73828979	73845256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166
transcript_54317.known	chr2	+	1778	11	FSM	ENSG00000124356.17	ENST00000684716.1	1778	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	171.353319197499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	9	True	NA	NA	False	NA	NA	NA	73828982	73873601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_54318.known	chr2	+	801	2	FSM	ENSG00000124356.17	ENST00000487811.2	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTGCTGTACAAACACA	NA	False	NA	NA	False	NA	NA	NA	73869788	73873588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73870353_73873351
transcript_54319.known	chr2	+	1916	10	FSM	ENSG00000124356.17	ENST00000682157.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	153.380508040994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTATTGTTATTTAATA	NA	False	NA	-40	True	NA	NA	NA	73828917	73862817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862210
transcript_54323.known	chr2	+	1075	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	628.723773475549	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-1	True	NA	17	True	AATAAA	-15	NA	73926879	73958946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_54332.known	chr2	+	880	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	744.793385778902	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	7224	False	NA	32	True	AATAAA	-30	NA	73926825	73958961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
transcript_54336.nnic	chr2	+	705	4	NIC	ENSG00000114956.20	novel	1075	7	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_1	880.571153033959	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	7199	False	NA	17	True	AATAAA	-15	NA	73926800	73958946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73927053_73957124_73957241_73958145_73958246_73958709
transcript_54338.nnic	chr2	+	618	3	NIC	ENSG00000114956.20	novel	703	4	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	395	junction_1	910.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	7170	False	NA	17	True	AATAAA	-15	NA	73926771	73958946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_73927053_73958145_73958246_73958709
transcript_54339.known	chr2	-	563	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	179	3	8	-3	multi-exon	TRUE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGAGGTTTCTCTTC	8	True	NA	-1	True	AATAAA	-16	NA	73981433	73957969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73958208_73981108
transcript_54340.known	chr2	-	419	2	FSM	ENSG00000237883.3	ENST00000439192.2	553	2	85	49	52	-49	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGCATTTAAAAAAACA	4957	False	NA	-47	True	AAGAAA	-9	NA	73981361	73958015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_73958208_73981134
transcript_54341.known	chr2	+	1029	6	FSM	ENSG00000114956.20	ENST00000629438.2	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_3	639.592807964567	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTGCTCATTTATT	7224	False	NA	30	True	AATAAA	-28	NA	73926825	73958959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_54342.known	chr2	+	703	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_2	508.732411653383	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-6	True	NA	17	True	AATAAA	-15	NA	73926874	73958946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
transcript_54343.known	chr2	-	555	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	0	0	0	multi-exon	TRUE	canonical	3	1184	junction_1	216.750240292062	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-14	True	NA	-2	True	ATTAAA	-33	NA	74147912	74135399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
transcript_54344.known	chr2	-	444	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_1	525.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGGGTCATTAGT	-7	True	NA	-17	True	ATTAAA	-18	NA	74147905	74135414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74135659_74145188_74145304_74147820
transcript_54345.known	chr2	+	3520	3	FSM	ENSG00000225439.4	ENST00000656407.1	3520	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCACTTTGGGGCCG	44	False	NA	NA	False	NA	NA	NA	74148078	74151952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74148224_74148349_74148479_74148706
transcript_54348.known	chr2	+	1804	2	FSM	ENSG00000225439.4	ENST00000423477.2	1804	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTTTTGCTTATCTCTA	4	True	NA	42	True	NA	NA	NA	74148038	74150061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74148479_74148697
transcript_54352.known	chr2	-	4896	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_2	76.1666593727203	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGGATTTTTGAGT	-28	True	NA	NA	False	AATATA	-20	NA	74178879	74152527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
transcript_54355.known	chr2	-	493	2	FSM	ENSG00000114978.18	ENST00000494600.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCAGAAACACAGTATT	-28	True	NA	NA	False	TATAAA	-33	NA	74178879	74178007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74178282_74178660
transcript_54359.known	chr2	+	2463	9	FSM	ENSG00000065911.13	ENST00000489041.2	2463	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	519.757154832908	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	-1	True	NA	NA	False	NA	NA	NA	74198612	74215525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_54364.known	chr2	+	4403	8	FSM	ENSG00000065911.13	ENST00000394053.7	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	147.596941509156	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATGTATCATGAAATG	1	True	NA	23	True	AATAAA	-27	NA	74198614	74217565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_54367.known	chr2	+	2276	8	FSM	ENSG00000065911.13	ENST00000679055.1	2276	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	580.702213896667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	1	True	NA	NA	False	NA	NA	NA	74198614	74215525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74201381_74201480_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_54368.known	chr2	+	1396	7	FSM	ENSG00000065911.13	ENST00000470592.5	1396	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	422.25456381982	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGATTTATCTAAG	-1	True	NA	NA	False	NA	NA	NA	74198612	74214741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_54373.known	chr2	+	4033	6	FSM	ENSG00000065911.13	ENST00000677377.1	4033	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	546.395314767614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACATGAATGGGAGTT	1	True	NA	-39	True	NA	NA	NA	74198614	74217503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74198743_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_54377.known	chr2	-	4365	28	FSM	ENSG00000204843.13	ENST00000409240.5	4365	28	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_18	108.316522912261	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	-29	True	NA	-6	True	ATTAAA	-17	NA	74392087	74361156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_54378.known	chr2	-	4229	27	FSM	ENSG00000204843.13	ENST00000434055.5	4229	27	0	0	0	0	multi-exon	TRUE	canonical	3	817	junction_17	108.451888550534	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGTGTGGTGTTGAG	-11	True	NA	-5	True	ATTAAA	-18	NA	74391867	74361155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_54383.known	chr2	+	1147	10	FSM	ENSG00000005448.17	ENST00000348227.4	1147	10	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	59.5932716394339	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-15	True	NA	27	True	CATAAA	-17	NA	74421729	74425755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_54387.known	chr2	+	1046	10	FSM	ENSG00000005448.17	ENST00000480089.5	1046	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	175.95580253133	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGGCTATGACCT	14	True	NA	-78	True	NA	NA	NA	74421758	74425650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74421817_74422119_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_5439.known	chr1	+	1045	5	FSM	ENSG00000233184.8	ENST00000446527.6	1204	5	65	94	9	-22	multi-exon	FALSE	canonical	2	6	junction_2	3.53553390593274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTTATAATGTATAAA	36	False	NA	-86	True	NA	NA	NA	101025918	101087171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_54391.nnic	chr2	+	1129	10	NNC	ENSG00000005448.17	novel	1147	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	180.602079476154	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-19	True	NA	27	True	CATAAA	-17	NA	74421725	74425755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_74421795_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_54400.nnic	chr2	+	1142	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	184.7940999464	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	6273	False	NA	27	True	CATAAA	-17	NA	74421680	74425755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_54401.nic	chr2	+	928	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	182.291276190058	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-19	True	NA	27	True	CATAAA	-17	NA	74421725	74425755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_54406.known	chr2	+	1862	7	FSM	ENSG00000005448.17	ENST00000465134.5	1862	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	213.146272154437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-1	True	NA	27	True	CATAAA	-17	NA	74421743	74425755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74425074_74425238_74425416_74425492_74425569
transcript_54407.known	chr2	-	2646	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	141.412418910866	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGCCTCACATCATCC	-47	True	NA	20	True	NA	NA	NA	74440583	74425835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
transcript_54409.known	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_11	107.203136132737	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	1785	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
transcript_54410.known	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	40.7793903545155	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-21	True	NA	21	True	NA	NA	NA	74441937	74425834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_54416.nnic	chr2	-	1979	11	NIC	ENSG00000114993.17	novel	2221	12	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	121.228090804071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	4	True	NA	-27	True	ATTAAA	-15	NA	74441912	74425882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_74426575_74427168_74427274_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_54426.known	chr2	-	820	2	FSM	ENSG00000114993.17	ENST00000484453.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCTAGTGTGCAAC	-3	True	NA	NA	False	NA	NA	NA	74442419	74432560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74432667_74441705
transcript_54432.nnic	chr2	+	1263	5	NIC	ENSG00000239779.7	novel	989	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	305.419793071765	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGGATTTGGGTGGA	-4	True	NA	16	True	ATTAAA	-16	NA	74458439	74460883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_74458672_74458831_74458920_74459642_74459746_74459872_74460050_74460220
transcript_54435.known	chr2	+	1069	5	FSM	ENSG00000239779.7	ENST00000494741.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	312.074810742553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGGTTACTTGCCCAC	30	False	NA	NA	False	GGGGCT	-44	NA	74458473	74460696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458672_74459437_74459553_74459642_74459746_74459872_74460050_74460220
transcript_54437.known	chr2	+	1175	4	FSM	ENSG00000239779.7	ENST00000233615.7	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	58.5396351960694	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	-6	True	NA	14	True	ATTAAA	-14	NA	74458437	74460881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458672_74459642_74459746_74459872_74460050_74460220
transcript_54438.known	chr2	+	765	4	FSM	ENSG00000239779.7	ENST00000470536.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	281.64319428825	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTCTGTACCGCAGA	6	True	NA	NA	False	NA	NA	NA	74458449	74460617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458538_74459642_74459746_74459872_74460050_74460220
transcript_5444.known	chr1	-	524	4	FSM	ENSG00000117543.22	ENST00000476507.1	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	24.0878023535196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATACATTTAATTGT	489	False	NA	NA	False	AATAAA	-22	NA	101025753	101013648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_101013819_101021640_101021766_101025308_101025467_101025682
transcript_54440.known	chr2	+	847	3	FSM	ENSG00000239779.7	ENST00000473467.5	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	69.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCCGGGGCAGGGGT	44	False	NA	NA	False	NA	NA	NA	74458487	74460432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74458672_74459642_74459746_74459872
transcript_54444.known	chr2	+	2916	13	FSM	ENSG00000115282.21	ENST00000233623.11	2916	13	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_8	27.1855762410061	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	2	True	NA	10	True	AATAAA	-18	NA	74483080	74494559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_54448.known	chr2	+	2806	12	FSM	ENSG00000115282.21	ENST00000424122.5	2806	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	42.0764750432604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	3	True	NA	10	True	AATAAA	-18	NA	74483081	74494559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74483136_74483321_74483411_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_5445.known	chr1	+	3944	3	FSM	ENSG00000233184.8	ENST00000659528.2	3983	3	39	0	4	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTCTTTCAATGTT	11	True	NA	NA	False	GATAAA	-38	NA	101025893	101090513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101083460_101083575_101086851
transcript_54452.known	chr2	-	2433	5	FSM	ENSG00000115275.15	ENST00000452063.7	2433	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	92.2831918607067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-16	True	NA	-122	True	NA	NA	NA	74465396	74461178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895_74464988_74465313
transcript_54453.known	chr2	-	2269	4	FSM	ENSG00000115275.15	ENST00000647915.1	2269	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	103.289237903407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGAATGTGAATCCAGA	-20	True	NA	-63	True	NA	NA	NA	74465400	74461119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74463013_74463189_74463387_74464895_74464988_74465313
transcript_54454.known	chr2	-	496	3	FSM	ENSG00000204822.7	ENST00000258105.8	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	10.5	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	-13	True	NA	-46	True	AATAAA	-23	NA	74472680	74471981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74472253_74472357_74472471_74472568
transcript_54455.known	chr2	+	431	2	FSM	ENSG00000115282.21	ENST00000463704.5	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTGTGCCTGTAATCT	10	True	NA	NA	False	NA	NA	NA	74483088	74483705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74483136_74483321
transcript_54456.known	chr2	-	386	2	FSM	ENSG00000204822.7	ENST00000409710.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTTTCTGGAACAAGA	-20	True	NA	-50	True	AATAAA	-19	NA	74472687	74471985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74472253_74472568
transcript_54457.known	chr2	-	1073	2	FSM	ENSG00000179528.16	ENST00000377566.9	1073	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTCTATCCAGACGC	-7	True	NA	1	True	AATAAA	-18	NA	74499603	74497516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74498319_74499332
transcript_54458.known	chr2	+	2083	1	FSM	ENSG00000257702.4	ENST00000603175.1	2083	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGATTTTTCTTTA	-11	True	NA	11	True	TATAAA	-12	NA	74502594	74504677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74502600_74504700
transcript_54459.nnic	chr2	-	852	9	NNC	ENSG00000115289.14	novel	907	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	29.4310635213884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-1	True	NA	-3	True	AATAAA	-16	NA	74507412	74505042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507347
transcript_5446.known	chr1	+	619	2	FSM	ENSG00000233184.8	ENST00000654574.2	634	2	11	4	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAACTGTTTTTCTT	-26	True	NA	8	True	AATAAA	-20	NA	101025856	101087265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101026062_101086851
transcript_54460.nic	chr2	-	858	9	NIC	ENSG00000115289.14	novel	907	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	29.7591897571154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-17	True	NA	-3	True	AATAAA	-16	NA	74507428	74505042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
transcript_54461.known	chr2	-	907	9	FSM	ENSG00000115289.14	ENST00000233630.11	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	7.37288105152931	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-7	True	NA	-3	True	AATAAA	-16	NA	74507695	74505042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507575
transcript_54462.known	chr2	-	1056	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	3.95381500088516	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-5	True	NA	-3	True	AATAAA	-16	NA	74507416	74505042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
transcript_54466.nic	chr2	-	870	6	NIC	ENSG00000115289.14	novel	1056	8	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_4	36.0310976796433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	3	True	NA	-3	True	AATAAA	-16	NA	74507408	74505042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74506731_74506885_74507041
transcript_5447.known	chr1	-	2159	9	FSM	ENSG00000117543.22	ENST00000370105.7	2159	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	127.539944723212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTTCTTCT	-1	True	NA	0	True	AATAAA	-23	NA	101025762	100989622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101022934_101023330_101025308_101025467_101025664
transcript_54471.known	chr2	-	2584	12	FSM	ENSG00000144045.14	ENST00000404568.4	2584	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31110955471418	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGTTTGGTCCTGCAG	-6	True	NA	-1	True	TATAAA	-21	NA	74526231	74518130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74518603_74519039_74519231_74519555_74519747_74519914_74520035_74522579_74522772_74522855_74523015_74523118_74523219_74523309_74523538_74523922_74524308_74525008_74525203_74525492_74525749_74526135
transcript_54472.known	chr2	-	3689	14	FSM	ENSG00000115318.12	ENST00000264094.8	3689	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_13	61.1170184222726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTGGCTGAGTATTCA	-1	True	NA	NA	False	AATAAA	-19	NA	74553942	74532257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74536708_74536929_74549368_74549584_74550184_74550349_74552321_74552647_74553875
transcript_54479.known	chr2	-	1458	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_9	69.1563087601002	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-11	True	NA	-25	True	ATTAAA	-19	NA	74529706	74526651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_5448.known	chr1	+	2778	2	FSM	ENSG00000170989.10	ENST00000305352.7	2778	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTGAAGAGCATTC	0	True	NA	7	True	AATAAA	-17	NA	101237018	101241518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_101237100_101238821
transcript_54484.known	chr2	-	1581	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_2	237.320684808587	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCTCGGTCTCAA	1196	False	NA	-18	True	ATTAAA	-26	NA	74529760	74526644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_54491.known	chr2	-	1645	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_2	58.4808515669873	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-2	True	NA	-25	True	ATTAAA	-19	NA	74529697	74526651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_54498.known	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	247.871922572929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	10	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_5450.known	chr1	-	7311	67	FSM	ENSG00000060718.22	ENST00000370096.9	7311	67	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_51	18.6993515500677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTGGTCATTTTCTT	5	True	NA	-5	True	AATAAA	-20	NA	103108522	102876472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_102878166_102879682_102879917_102881696_102881766_102883198_102883312_102886806_102887057_102888576_102888631_102888722_102888759_102888865_102888920_102889454_102889563_102890450_102890505_102898124_102898179_102898665_102898774_102898940_102898995_102912158_102912213_102913636_102913691_102914351_102914406_102914703_102914812_102915630_102915685_102920310_102920365_102921517_102921572_102923335_102923390_102934448_102934557_102935059_102935114_102939034_102939089_102940326_102940435_102946848_102946957_102961865_102961920_102962175_102962266_102962652_102962761_102965486_102965541_102970218_102970273_102974829_102974884_102978707_102978753_102978859_102978914_102979059_102979105_102979381_102979436_102984137_102984192_102987632_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
transcript_54511.known	chr2	-	2837	10	FSM	ENSG00000115318.12	ENST00000470907.6	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_9	22.286019533929	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAACAGTGTTAAAT	6041	False	NA	NA	False	AATAAA	-44	NA	74549663	74532413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368
transcript_54513.known	chr2	+	1323	9	FSM	ENSG00000115317.12	ENST00000467961.5	1323	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	55.406311689193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCTAAACTTAGGGGAG	-4	True	NA	-65	True	NA	NA	NA	74529774	74533247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74529913_74530460_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_54514.known	chr2	+	1294	9	FSM	ENSG00000115317.12	ENST00000462909.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	53.4741467907624	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATTATACCTAG	12	False	NA	-11	True	NA	NA	NA	74529724	74533152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74529913_74530444_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_5452.nic	chr1	-	2687	25	ISM	ENSG00000060718.22	ENST00000645458.1	2442	26	337	-65	-13	0	3prime_fragment	FALSE	canonical	1	1	junction_1	12.3978464751836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGTATGTGACCTTT	-8	True	NA	NA	False	AATAAA	-18	NA	103108535	103001013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_103001202_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
transcript_54523.known	chr2	+	1785	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	13.2526470209247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	-37	True	NA	7	True	ATTAAA	-19	NA	74529932	74533319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_54532.known	chr2	+	1461	5	FSM	ENSG00000115325.14	ENST00000480318.5	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	26.8467875173176	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGACGGCAAGGCTGAGG	1	True	NA	NA	False	NA	NA	NA	74554737	74557114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74554815_74555155_74555454_74555574_74555669_74555893_74556079_74556307
transcript_54535.known	chr2	+	1722	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	30.2140511829991	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	-6	True	NA	27	True	ATTAAA	-20	NA	74554730	74557551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
transcript_54537.known	chr2	+	1479	7	FSM	ENSG00000115317.12	ENST00000437202.1	1479	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.3070028487502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAGGGCTGGATC	12	True	NA	29	True	AATAAA	-32	NA	74530045	74533192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531566_74531703_74531855_74531926_74532819
transcript_54538.known	chr2	-	2544	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	14.9549322967374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	-8	True	NA	-1	True	AATAAA	-17	NA	74648330	74557882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_54540.nnic	chr2	-	2350	10	NIC	ENSG00000159374.18	novel	2544	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	15.7158408722215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	NA	False	NA	-1	True	AATAAA	-17	NA	74648343	74557882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_74558875_74559697_74559710_74560150_74560292_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_54541.known	chr2	-	2531	10	FSM	ENSG00000159374.18	ENST00000536235.5	2531	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	14.1970262926979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCCTGTGCTTC	-16	True	NA	-10	True	AATAAA	-8	NA	74648338	74557891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74558875_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_54547.known	chr2	-	1333	1	FSM	ENSG00000272711.1	ENST00000610008.1	1333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCCTCTCAGCAAAACT	NA	False	NA	0	True	AATAAA	-17	NA	74833987	74832654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_74832700_74834000
transcript_54548.known	chr2	+	1097	4	FSM	ENSG00000115350.12	ENST00000483063.2	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	19.4821855949366	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAGGGTACATGTGCA	-13	True	NA	NA	False	NA	NA	NA	74958642	74970128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74958893_74959340_74959426_74960104_74960147_74969408
transcript_54549.known	chr2	+	528	4	FSM	ENSG00000115350.12	ENST00000465242.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	158.410858213697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTCAGTCCAGTGTGT	350	False	NA	3	True	AATAAA	-10	NA	74959005	74969723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_74959092_74959340_74959426_74960104_74960147_74969408
transcript_5455.nic	chr1	-	4145	4	ISM	ENSG00000060718.22	ENST00000427239.5	1709	15	-357	63008	-13	-40580	5prime_fragment	FALSE	canonical	3	46	junction_1	3.2659863237109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTCCTAC	-8	True	NA	NA	False	AATGAA	-30	NA	103108535	103071480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_103074781_103078657_103078872_103082804_103082973_103108072
transcript_54552.known	chr2	+	1076	7	FSM	ENSG00000115364.14	ENST00000409374.5	1076	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	254.554130894699	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAACCATAATAAATTCT	11	True	NA	NA	False	CATAAA	-40	NA	75646802	75670753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063_75655303_75670578
transcript_54554.known	chr2	+	7825	6	FSM	ENSG00000115364.14	ENST00000393909.7	7825	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_3	19.3142434488126	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGGATTTGATTTGC	-9	True	NA	11	True	AATAAA	-20	NA	75646782	75662206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063
transcript_54559.known	chr2	-	1066	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	19.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	-1	True	NA	NA	False	AATAAA	-20	NA	75710899	75701795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_75702424_75706522_75706652_75710590
transcript_54561.known	chr2	+	720	2	FSM	ENSG00000115364.14	ENST00000493686.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATAAAAACTTATATGAA	-9	True	NA	NA	False	AGTAAA	-45	NA	75646782	75647693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75646911_75647101
transcript_54562.known	chr2	+	693	6	FSM	ENSG00000115364.14	ENST00000358788.10	693	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	332.436219446678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGTAAAATGCT	2	True	NA	NA	False	AATAAA	-30	NA	75646793	75690759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75679774_75679853_75690633
transcript_54571.known	chr2	-	1328	10	FSM	ENSG00000163541.12	ENST00000651342.1	1328	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	129.908609851619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTACTATTTGATTT	-23	True	NA	-28	True	NA	NA	NA	84459285	84423550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84436051_84436128_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_54573.known	chr2	-	1270	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_8	22.2373559579371	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGGAGGCTTATT	-18	True	NA	-5	True	AATAAA	-19	NA	84459280	84423527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_54574.known	chr2	-	568	6	FSM	ENSG00000163541.12	ENST00000442240.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	150.132474834727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGCCATATTCACAAAA	1	True	NA	NA	False	NA	NA	NA	84459261	84441078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84441105_84441246_84441460_84443283_84443401_84448928_84448948_84449648_84449753_84459172
transcript_54575.known	chr2	-	1814	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	15.0996688705415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTTTTGTATAGATT	-17	True	NA	-23	True	AATAAA	-27	NA	84881084	84821665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_54576.known	chr2	-	1554	5	FSM	ENSG00000186854.11	ENST00000409133.1	1554	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5099960031968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGAGGCTCTGTGTA	242	False	NA	NA	False	NA	NA	NA	84881150	84837789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_84838242_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_54580.known	chr2	+	461	3	FSM	ENSG00000034510.6	ENST00000233143.6	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	20189	junction_2	1013	9324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	1	True	NA	19	True	AATAAA	-16	NA	84905655	84906671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_84905719_84906002_84906118_84906388
transcript_54581.known	chr2	+	7500	7	FSM	ENSG00000176407.18	ENST00000409785.9	7500	7	0	0	0	0	multi-exon	FALSE	non_canonical	3	663	junction_5	46.3752807718365	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTTCCATTGCATTC	15	True	NA	6	True	AATAAA	-15	NA	84971160	85059472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_84971468_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_54588.nnic	chr2	+	2312	10	NNC	ENSG00000152284.5	novel	715	2	NA	NA	22919	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	341.124429707416	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTTTCTTTAGTGC	NA	False	NA	25	True	AATAAA	-21	NA	85236541	85310387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_85236603_85283494_85283579_85302483_85302617_85303894_85303998_85304254_85304339_85305259_85305404_85306205_85306366_85306451_85306560_85307641_85307718_85309028
transcript_54589.known	chr2	-	6138	5	FSM	ENSG00000152291.15	ENST00000398263.6	6138	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	76.5453297073048	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-5	True	NA	35	True	AATAAA	-20	NA	85328251	85318026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85322742_85324914_85324999_85326507_85326805_85326978_85327686_85327916
transcript_54592.known	chr2	-	6050	4	FSM	ENSG00000152291.15	ENST00000377386.8	6050	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	39.9694327649962	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-10	True	NA	35	True	AATAAA	-20	NA	85327989	85318026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85322742_85324914_85324999_85326507_85327686_85327916
transcript_54594.known	chr2	-	6419	5	NNC	ENSG00000152291.15	novel	2276	4	NA	NA	-45	7	intron_retention	TRUE	non_canonical	0	0	junction_1	120.3837613634	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATTTATTTATTTATT	-15	True	NA	42	True	AATAAA	-27	NA	85328296	85318019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_85322743_85322745_85322800_85324914_85324999_85326507_85327686_85327916
transcript_54597.known	chr2	-	2235	4	FSM	ENSG00000152291.15	ENST00000409232.7	2235	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.376571027462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACTCAGTAGGAACTTT	5768	False	NA	-14	True	AATAAA	-33	NA	85328024	85321893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85322759_85324914_85324999_85326507_85327686_85327916
transcript_54598.known	chr2	+	2364	14	FSM	ENSG00000115459.18	ENST00000409013.8	2364	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	14.8782037472795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	6	True	NA	10	True	AATAAA	-14	NA	85354768	85391748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85354830_85355075_85355171_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_54609.known	chr2	-	3141	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_9	9.27146158919941	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGTGGGGTCTGCGCC	2	True	NA	NA	False	AATAAA	-21	NA	85354528	85341954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
transcript_5461.nic	chr1	+	1926	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.950549357115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	-1	True	NA	NA	False	AATAAA	-21	NA	103525673	103555239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_54610.nic	chr2	-	2843	10	NIC	ENSG00000042445.14	novel	3141	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	14.727986293004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTGGTTTTTTGTTC	0	True	NA	3	True	AATAAA	-32	NA	85354530	85342087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_85343382_85343638_85343799_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
transcript_54612.known	chr2	+	4761	12	FSM	ENSG00000115459.18	ENST00000446464.7	4761	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.4454525243542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	-17	True	NA	10	True	AATAAA	-14	NA	85354745	85391748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85354830_85355075_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85387097_85387226_85389750_85389828_85390137
transcript_54621.known	chr2	-	1250	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	191.37849512174	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	-12	True	NA	-8	True	AATAAA	-34	NA	85410366	85394752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
transcript_54623.known	chr2	-	1151	10	FSM	ENSG00000042493.16	ENST00000409724.5	1151	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	209.449071566925	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGCGTCTTCCTGCCC	5463	False	NA	-148	True	NA	NA	NA	85414074	85394892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413983
transcript_54640.known	chr2	-	7556	15	FSM	ENSG00000115486.13	ENST00000233838.9	7556	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	14.315148248892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	1	True	NA	-18	True	AATAAA	-16	NA	85561493	85544719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85560814_85560986_85561385
transcript_54648.known	chr2	+	2817	9	FSM	ENSG00000168906.13	ENST00000306434.8	2817	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_8	53.2868123929364	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTACTCATTTGT	1	True	NA	NA	False	AATAAA	-21	NA	85539167	85545281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900_85543035_85543669
transcript_54652.nic	chr2	+	3454	8	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	-3	1	-3	-1	intron_retention	FALSE	canonical	3	345	junction_2	21.4323806138168	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	-2	True	NA	NA	False	AATAAA	-20	NA	85539164	85545280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900
transcript_54661.known	chr2	-	684	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-27	0	-15	0	multi-exon	FALSE	canonical	3	136	junction_1	2.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	281	False	NA	-9	True	ATTAAA	-18	NA	85561547	85558724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85559076_85560814_85560986_85561385
transcript_54662.known	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	1	True	NA	NA	False	NA	NA	NA	85561493	85558583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85559076_85561385
transcript_54665.known	chr2	+	805	4	FSM	ENSG00000118640.11	ENST00000409760.1	805	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	311.836495619098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	10	True	NA	26	True	AATAAA	-19	NA	85577592	85582031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85577650_85579008_85579168_85579741_85579875_85581575
transcript_54666.known	chr2	+	664	3	FSM	ENSG00000118640.11	ENST00000432071.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	354.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGGGTAATAAAGACC	-1	True	NA	-8	True	NA	NA	NA	85561561	85581997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85561645_85579008_85579168_85581575
transcript_54667.known	chr2	+	679	3	FSM	ENSG00000118640.11	ENST00000263864.10	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	24	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	3	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85577650_85579008_85579168_85581575
transcript_54673.nnic	chr2	+	996	5	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-53	0	multi-exon	FALSE	canonical	2	4	junction_2	276.434779830614	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577532	85593406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85579008_85579168_85581753_85581877_85591724_85591863_85592947
transcript_54674.nnic	chr2	+	939	5	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-53	0	multi-exon	FALSE	canonical	2	6	junction_2	276.106297465306	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577532	85593406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85579008_85579168_85581810_85581877_85591724_85591863_85592947
transcript_54675.nnic	chr2	+	873	4	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-53	0	multi-exon	FALSE	canonical	3	10	junction_2	298.258277336942	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577532	85593406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85579008_85579168_85591724_85591863_85592947
transcript_54676.nnic	chr2	+	717	3	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	679	3	NA	NA	-56	0	multi-exon	FALSE	canonical	3	12	junction_1	21.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577529	85593406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_85577650_85591724_85591863_85592947
transcript_54677.known	chr2	+	660	3	FSM	ENSG00000168899.5	ENST00000306384.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	11.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	-1	True	NA	24	True	ATTAAA	-15	NA	85584430	85593406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85584494_85591724_85591863_85592947
transcript_54680.known	chr2	+	685	5	FSM	ENSG00000168894.10	ENST00000306368.9	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	132.822014365089	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGACTCATGGCAGTG	-4	True	NA	NA	False	NA	NA	NA	85595744	85597708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103_85597179_85597444
transcript_54681.known	chr2	+	535	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	784.85189685698	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	7	True	NA	68	True	ATTAAA	-39	NA	85595755	85597604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
transcript_54684.known	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	892.746449011264	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	68	False	NA	77	True	NA	NA	NA	85595816	85597613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
transcript_54685.nnic	chr2	+	523	4	NIC	ENSG00000168894.10	novel	535	5	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	192	junction_2	819.220089814426	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	7879	False	NA	68	True	ATTAAA	-39	NA	85595692	85597604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_85595850_85596518_85596650_85597103_85597179_85597444
transcript_54686.nnic	chr2	+	367	4	NNC	ENSG00000168894.10	novel	535	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	839.310166479327	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	-6	True	NA	68	True	ATTAAA	-39	NA	85595742	85597604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_85595850_85596906_85596932_85597103_85597179_85597444
transcript_54689.known	chr2	+	844	4	FSM	ENSG00000168894.10	ENST00000441634.5	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	118.662921289208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGCTGTATTGATCAC	1	True	NA	45	True	ATTAAA	-16	NA	85595724	85597581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103
transcript_5469.nic	chr1	+	550	5	ISM	ENSG00000185946.16	ENST00000531883.5	686	6	-23	631	-17	-631	5prime_fragment	FALSE	canonical	3	24	junction_1	27.6891224129621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGGTTATTTAACAGT	-1	True	NA	NA	False	GATAAA	-10	NA	103525673	103534810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773
transcript_54693.known	chr2	+	2034	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_13	193.270574048145	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	5	True	NA	71	True	ATTAAA	-19	NA	85616168	85649280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
transcript_54694.known	chr2	+	2148	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	305.001127047098	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	-22	True	NA	71	True	ATTAAA	-19	NA	85602855	85649280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_54695.nic	chr2	+	2144	13	NIC	ENSG00000168883.20	novel	2148	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	25	junction_1	229.060445079459	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	7091	False	NA	71	True	ATTAAA	-19	NA	85602839	85649280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_85603082_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_54697.known	chr2	+	2161	13	FSM	ENSG00000168883.20	ENST00000613444.4	2161	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	234.112627216522	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTGTTTTATATCTT	-11	True	NA	73	True	ATTAAA	-21	NA	85612102	85649282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85612360_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_54698.known	chr2	+	2183	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_7	63.8880857437441	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTTTTATATCTTT	22	True	NA	74	True	ATTAAA	-22	NA	85616185	85649283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_5470.known	chr1	+	2144	15	FSM	ENSG00000185946.16	ENST00000423855.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	13.3630620956212	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	-12	True	NA	NA	False	AATAAA	-21	NA	103525698	103555239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_54702.nic	chr2	-	1655	8	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	45.0188169274918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-4	True	NA	-4	True	ATTAAA	-17	NA	85602671	85598546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601305_85601483_85601883_85602065_85602606
transcript_54703.nnic	chr2	-	1582	8	NNC	ENSG00000168890.14	novel	1553	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	43.1272441001447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-19	True	NA	-4	True	ATTAAA	-17	NA	85602416	85598546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602295
transcript_54704.known	chr2	-	1553	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	25.8883000915984	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-2	True	NA	-4	True	ATTAAA	-17	NA	85602698	85598546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_54707.known	chr2	-	1810	7	FSM	ENSG00000168890.14	ENST00000444380.5	1810	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	26.9036346160803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTATATTAAAAGAAT	8	True	NA	-35	True	NA	NA	NA	85602659	85598577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601483_85601883_85602065_85602606
transcript_54709.known	chr2	-	1484	7	FSM	ENSG00000168890.14	ENST00000306353.7	1484	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	36.4356357918392	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTAGCCTGTTCTGG	-2	True	NA	-5	True	ATTAAA	-16	NA	85602698	85598547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_5471.known	chr1	+	2621	1	FSM	ENSG00000198890.9	ENST00000370078.2	2621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTAAACTTTGGTTGTA	-15	True	NA	NA	False	ATTAAA	-22	NA	107056673	107059294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_107056700_107059300
transcript_54714.nnic	chr2	-	1470	6	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	54.5651903689523	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	9318	False	NA	-4	True	ATTAAA	-17	NA	85602731	85598546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601883_85602065_85602606
transcript_54716.nic	chr2	-	1845	6	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	-33	0	intron_retention	FALSE	canonical	3	31	junction_3	39.1683545735585	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	9318	False	NA	-4	True	ATTAAA	-17	NA	85602731	85598546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601483_85601883_85602065_85602606
transcript_54721.known	chr2	-	4274	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	6.94422221866655	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGCCAAGAGTTGT	-17	True	NA	0	True	AATAAA	-19	NA	85612066	85605253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
transcript_54723.known	chr2	-	1776	7	FSM	ENSG00000168890.14	ENST00000409668.1	1776	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	27.9145521587258	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTTTTTTTTATATTAA	-19	True	NA	-41	True	NA	NA	NA	85602416	85598583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883
transcript_54724.nic	chr2	-	2452	9	ISM	ENSG00000068654.17	ENST00000486964.5	1427	10	-17	1523	0	209	5prime_fragment	FALSE	canonical	3	76	junction_6	16.582652833609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAATTGGTCGTCCCCTT	-28	True	NA	NA	False	ATTAAA	-8	NA	86105890	86079563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_54725.known	chr2	-	3156	6	FSM	ENSG00000068654.17	ENST00000684026.1	3156	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	16.4365446490435	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGTCTCTACTAAAAAA	-28	True	NA	NA	False	NA	NA	NA	86105890	86086253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_5473.known	chr1	-	4249	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	0	0	0	multi-exon	TRUE	canonical	3	307	junction_8	37.8254601042574	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTTTACAGTATTT	15	True	NA	-11	True	AATAAA	-15	NA	108200343	108134042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_54734.known	chr2	+	6681	24	FSM	ENSG00000132300.19	ENST00000254630.12	6681	24	0	0	0	0	multi-exon	FALSE	canonical	1	179	junction_15	108.59076678696	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGGCTCACACCTGTA	1	True	NA	2	True	AATAAA	-14	NA	86106234	86142157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86106352_86108349_86108403_86108499_86108537_86111112_86111159_86116529_86116599_86117054_86117160_86118920_86119045_86121478_86121595_86123700_86123763_86124994_86125083_86125454_86125516_86125794_86125881_86127160_86127306_86127940_86127992_86130647_86130738_86131077_86131107_86132317_86132425_86133177_86133257_86133345_86133437_86134291_86134378_86134838_86134988_86136520_86136563_86136981_86137141_86137468
transcript_5474.known	chr1	+	2331	1	FSM	ENSG00000280186.1	ENST00000622910.1	2331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTAGTATTGCATTT	-11	True	NA	NA	False	AATAAA	-26	NA	108200412	108202743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108200400_108202700
transcript_5475.known	chr1	-	1717	9	FSM	ENSG00000162639.16	ENST00000370031.5	1717	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.854497241083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	382	False	NA	-5	True	AATAAA	-26	NA	108661055	108648294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108649340_108649434_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_5476.known	chr1	-	1244	8	FSM	ENSG00000162639.16	ENST00000420055.1	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	17.3569958841514	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCACAGAGGTTGAGAA	257	False	NA	NA	False	NA	NA	NA	108661180	108648799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_54766.known	chr2	+	587	3	FSM	ENSG00000132300.19	ENST00000473829.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAGCAAAATTTAGCTT	10	True	NA	NA	False	AATAAA	-11	NA	86106243	86108925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86106352_86108349_86108403_86108499
transcript_54767.known	chr2	+	210	4	FSM	ENSG00000132300.19	ENST00000627371.1	210	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	309.423478244442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTTCAGATGAGATCTG	14	True	NA	NA	False	NA	NA	NA	86106247	86110993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86106352_86108349_86108403_86108499_86108537_86110977
transcript_54769.known	chr2	-	2670	15	FSM	ENSG00000132305.22	ENST00000449247.6	2670	15	0	0	0	0	multi-exon	FALSE	canonical	1	131	junction_5	186.410686060513	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	28	False	NA	-7	True	AATAAA	-20	NA	86195472	86143931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_54770.known	chr2	-	2627	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_10	208.588746834824	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATCTTATCCCTTTT	32	True	NA	-11	True	AATAAA	-16	NA	86195403	86143935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_54777.nic	chr2	-	1074	9	ISM	ENSG00000132305.22	ENST00000474969.5	1431	10	-76	1247	-39	-376	5prime_fragment	FALSE	canonical	3	274	junction_5	137.91341260008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGCTGGGGCCAAGCC	NA	False	NA	16	True	AAGAAA	-4	NA	86195511	86159622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_54779.known	chr2	+	1061	5	FSM	ENSG00000132313.15	ENST00000254644.12	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	116.983706130384	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGATGTTCGATTAT	4194	False	NA	22	True	AATAAA	-22	NA	86199354	86212838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86212425
transcript_5478.known	chr1	-	1874	8	FSM	ENSG00000162639.16	ENST00000370032.9	1874	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	11.1446884941955	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	NA	False	NA	-5	True	AATAAA	-26	NA	108661526	108648294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108661183
transcript_54781.known	chr2	+	651	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	103.588126732749	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTGCCGATGATTT	-8	True	NA	-33	True	NA	NA	NA	86199462	86213738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
transcript_54782.known	chr2	+	3723	4	FSM	ENSG00000132313.15	ENST00000337109.9	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	8.17856276425687	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	-14	True	NA	19	True	AATAAA	-15	NA	86199456	86213790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479
transcript_54786.known	chr2	+	4667	26	FSM	ENSG00000115548.17	ENST00000312912.10	4667	26	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	14.0089114495024	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	-3	True	NA	15	True	ATTAAA	-15	NA	86441370	86492716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
transcript_54787.known	chr2	+	4928	27	FSM	ENSG00000115548.17	ENST00000409556.5	4928	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	24.6641644074386	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	NA	False	NA	15	True	ATTAAA	-15	NA	86440800	86492716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86440963_86441271_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
transcript_5479.nic	chr1	-	1571	7	NIC	ENSG00000162639.16	novel	1662	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	22.408455745296	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	-14	True	NA	-5	True	AATAAA	-26	NA	108661101	108648294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108660962
transcript_54790.nnic	chr2	+	640	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-49	-6597	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	55	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTATATGTTGATTTC	NA	False	NA	NA	False	AATAAA	-24	NA	86441321	86443290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_54791.nnic	chr2	+	1292	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-49	-5945	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	55	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTATGTGATTTGA	NA	False	NA	15	True	AATAAA	-16	NA	86441321	86443942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_54795.known	chr2	-	3138	6	FSM	ENSG00000115561.16	ENST00000263856.9	3138	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	11.8558002682231	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCGTTTGACTG	37	False	86563462	1	True	AATAAA	-28	NA	86563443	86503429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563303
transcript_54798.known	chr2	-	1099	5	FSM	ENSG00000115561.16	ENST00000409225.2	1099	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	53.1666013583716	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTGTAGATTGCCCTG	1	True	NA	-3	True	AATAAA	-20	NA	86563479	86505443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86563303
transcript_548.known	chr1	+	2178	5	FSM	ENSG00000049245.13	ENST00000054666.11	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	18.4661853126194	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	-13	True	NA	11	True	AATAAA	-17	NA	7771295	7781432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7771386_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_54802.known	chr2	-	1293	5	FSM	ENSG00000239305.7	ENST00000477307.5	1293	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.0143186453416	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAGAAGAGAAGGCGCA	-3	True	NA	NA	False	NA	NA	NA	86623866	86604599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86605419_86612158_86612275_86620329_86620470_86622660_86622828_86623815
transcript_54805.nic	chr2	-	573	4	NIC	ENSG00000115561.16	novel	436	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	71.1867653117878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAGCTCCTTTAATACA	39	False	86563462	NA	False	TATAAA	-19	NA	86563441	86527047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_86527242_86529217_86529398_86542251_86542313_86563303
transcript_54806.known	chr2	-	920	3	FSM	ENSG00000115561.16	ENST00000485465.1	920	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	78	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAATTAGACACTACAG	-21	True	NA	NA	False	ATTAAA	-25	NA	86563440	86540642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_86541365_86542251_86542313_86563303
transcript_54807.known	chr2	+	6183	9	FSM	ENSG00000153561.13	ENST00000283632.5	6183	9	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_8	69.3217137699293	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGAACCAGTCTGTA	-7	True	NA	18	True	ATTAAA	-22	NA	86720290	86778041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_86720810_86740926_86741070_86751895_86752031_86753457_86753559_86765026_86765194_86765858_86766025_86770022_86770126_86771557_86771713_86773347
transcript_54809.known	chr2	-	2217	11	FSM	ENSG00000285793.1	ENST00000648819.1	2217	11	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_10	127.579622197277	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-2	True	NA	NA	False	AATAAA	-20	NA	87076429	87030674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
transcript_54811.known	chr2	+	529	2	FSM	ENSG00000222041.12	ENST00000331944.10	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-1	True	NA	6	True	ATTAAA	-23	NA	87455428	87521518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_87455646_87521206
transcript_54812.known	chr2	+	2638	18	FSM	ENSG00000284879.1	ENST00000643276.1	2638	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	220.137720341052	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATTCAGAAATAAAATAA	-4	True	NA	NA	False	NA	NA	NA	87455475	87739214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_87455646_87583257_87583347_87606592_87606770_87700983_87701054_87704332_87704601_87707761_87707911_87713358_87713438_87714047_87714085_87714178_87714250_87716611_87716791_87719806_87720022_87722300_87722420_87725936_87726209_87732386_87732622_87735673_87735766_87737717_87737853_87738022_87738106_87739016
transcript_54815.nnic	chr2	+	2121	3	NNC	ENSG00000287670.1	novel	939	2	NA	NA	35	1372	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	6	True	ATTAAA	-16	NA	88017051	88022823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_88017292_88020695_88021450_88021696
transcript_54816.known	chr2	+	845	2	FSM	ENSG00000287670.1	ENST00000662935.1	845	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATCGAGACCATCCCGG	NA	False	NA	NA	False	ATTAAA	-18	NA	88016779	88021451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88016869_88020695
transcript_54817.nnic	chr2	-	1740	4	NNC	ENSG00000172086.9	novel	1807	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	41.6119640915393	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-4	True	NA	-2	True	AATAAA	-16	NA	88055777	88027204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_88028586_88034133_88034232_88036942_88037052_88055625
transcript_54818.known	chr2	-	1807	4	FSM	ENSG00000172086.9	ENST00000347055.4	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	4.02768199119819	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-10	True	NA	-2	True	AATAAA	-16	NA	88055783	88027204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_88028586_88034133_88034293_88036942_88037052_88055625
transcript_5482.known	chr1	-	822	6	FSM	ENSG00000162639.16	ENST00000493676.1	822	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	31.2896148905671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGCCAAGGCGGAAAG	23	True	NA	NA	False	NA	NA	NA	108661064	108648893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108657450_108657580_108660962
transcript_54821.known	chr2	+	1614	2	FSM	ENSG00000234028.4	ENST00000453008.3	1616	2	0	2	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTTTGTGTCTTAC	578	False	NA	6	True	AATAAA	-14	NA	88627538	88631819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88628733_88631399
transcript_54823.known	chr2	+	1813	9	FSM	ENSG00000153574.9	ENST00000283646.5	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	16.0307322041134	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	0	True	NA	14	True	AATAAA	-15	NA	88691672	88750929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88691984_88698483_88698545_88700008_88700065_88729277_88729338_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_54829.known	chr2	+	1737	17	FSM	ENSG00000230006.8	ENST00000393515.7	1737	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	0.992156741649222	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGTATCTTTTATGT	28	False	NA	NA	False	ATTAAA	-33	NA	88765901	88806602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_88766197_88772972_88773045_88776500_88776574_88782733_88782763_88782852_88782926_88784597_88784627_88784720_88784927_88786469_88786499_88786590_88786664_88788317_88788347_88788441_88788515_88792420_88792495_88801098_88801306_88804379_88804451_88804786_88804881_88805378_88805409_88806322
transcript_54830.known	chr2	-	1196	3	FSM	ENSG00000283196.2	ENST00000636531.1	1196	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	NA	False	NA	NA	False	ATTAAA	-13	NA	89585615	89542841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_89543837_89581005_89581141_89585549
transcript_54832.known	chr2	-	622	4	FSM	ENSG00000283196.2	ENST00000636560.1	622	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	41.8807831827438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGACTGAATGCTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	89585608	89562334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_89562685_89580557_89580636_89581005_89581141_89585549
transcript_54833.nnic	chr2	+	843	3	Fusion	ENSG00000211633.3_ENSG00000242580.1	novel	532	2	NA	NA	-4	388	multi-exon	FALSE	canonical	1	3	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAATTTCATGTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	90190188	90210917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_90190268_90210028_90210109_90210233
transcript_54834.known	chr2	+	528	1	FSM	ENSG00000261600.1	ENST00000567067.1	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	9022	False	NA	NA	False	AATAAA	-17	NA	91580335	91580863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_91580300_91580900
transcript_54836.nic	chr2	-	904	2	ISM	ENSG00000143429.11	ENST00000689711.1	567	3	-18	18015	-18	-11699	5prime_fragment	FALSE	canonical	3	101	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCCGAGCGTAGGG	0	True	NA	NA	False	AATACA	-11	NA	91660007	91654697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_91655503_91659908
transcript_54837.known	chr2	-	1194	3	FSM	ENSG00000143429.11	ENST00000609777.6	1214	3	17	3	7	-3	multi-exon	FALSE	canonical	3	20	junction_1	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	2	True	NA	NA	False	ATTAAA	-13	NA	91659972	91617159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_91618155_91655367_91655503_91659908
transcript_54838.known	chr2	-	3298	12	FSM	ENSG00000144029.12	ENST00000272418.7	3298	12	0	0	0	0	multi-exon	TRUE	canonical	3	502	junction_5	73.6059420885556	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTACTTACTATCTG	0	True	NA	NA	False	AATAAA	-33	NA	95121808	95085368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54839.nnic	chr2	-	1383	12	NNC	ENSG00000144029.12	novel	3298	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	182.077814624716	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	-3	True	NA	-19	True	AATAAA	-15	NA	95121811	95087207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108253_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54842.known	chr2	-	1359	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	178.646046695694	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	9	True	NA	-19	True	AATAAA	-15	NA	95121799	95087207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54843.nnic	chr2	-	1319	11	NNC	ENSG00000144029.12	novel	1359	11	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	242.804365693865	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	192	False	NA	-19	True	AATAAA	-15	NA	95121838	95087207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108253_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54845.nic	chr2	-	388	4	ISM	ENSG00000144029.12	ENST00000475895.5	1672	7	-7	6207	-7	5162	5prime_fragment	FALSE	canonical	3	633	junction_2	10.2089285540757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGAAAGGATCTGA	-12	True	NA	NA	False	AAAAAG	-23	NA	95121820	95109959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_95110042_95115065_95115204_95117864_95117946_95121733
transcript_54846.known	chr2	+	3580	5	FSM	ENSG00000275111.5	ENST00000614034.5	3580	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.35410196624968	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTGATGACTGTCC	4	True	NA	5	True	AATAAA	-17	NA	95165808	95184317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_95165861_95176187_95176260_95177482_95177610_95180158_95180273_95181102
transcript_54849.known	chr2	+	567	2	FSM	ENSG00000115041.13	ENST00000461336.5	567	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGCCACATCTAGAGTA	15	True	NA	NA	False	NA	NA	NA	95297346	95303503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_95297454_95303043
transcript_54851.known	chr2	+	1366	9	FSM	ENSG00000115042.10	ENST00000447036.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	113.504336370907	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-7	True	NA	-23	True	NA	NA	NA	95402722	95413096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_95402873_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54853.nic	chr2	+	1505	9	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	125.180619506376	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-26	True	NA	-23	True	NA	NA	NA	95402703	95413096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_95402993_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54854.known	chr2	+	4775	8	FSM	ENSG00000115042.10	ENST00000233379.9	4775	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	82.102723114749	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTCTGGCTTGCTGT	-22	True	NA	20	True	AATAAA	-30	NA	95402707	95416616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_95402873_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54856.nic	chr2	+	1382	8	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	114.432584199303	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-29	True	NA	-23	True	NA	NA	NA	95402700	95413096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54862.nnic	chr2	+	1018	7	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	122.51938622112	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-36	True	NA	-23	True	NA	NA	NA	95402693	95413096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_95402873_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54867.nnic	chr2	+	816	6	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	120.448163124225	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-23	True	NA	NA	NA	95402678	95413096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_95402873_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_54873.nnic	chr2	+	653	5	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	161.327307049985	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-23	True	NA	NA	NA	95402678	95413096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_95402873_95410526_95410587_95412433_95412543_95412676_95412765_95412894
transcript_54904.nnic	chr2	+	1403	6	FSM	ENSG00000231584.9	ENST00000689599.1	1381	6	-27	5	-2	0	multi-exon	FALSE	canonical	1	1	junction_2	26.2937254872717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	NA	False	NA	6	True	AGTAAA	-19	NA	96010523	96023380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96019200_96019261_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54907.nnic	chr2	+	1417	6	FSM	ENSG00000231584.9	ENST00000685578.1	1392	6	-30	5	-2	0	multi-exon	FALSE	canonical	3	11	junction_2	23.3786227139239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	NA	False	NA	6	True	AGTAAA	-19	NA	96010523	96023380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96019200_96019275_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54911.nnic	chr2	+	1813	6	FSM	ENSG00000231584.9	ENST00000691870.1	1824	6	6	5	0	0	multi-exon	FALSE	canonical	3	28	junction_1	63.6572069761154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-8	True	NA	6	True	AGTAAA	-19	NA	96010550	96023380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54915.nnic	chr2	+	1623	5	FSM	ENSG00000231584.9	ENST00000690531.1	1620	5	-8	5	-2	0	multi-exon	FALSE	canonical	3	19	junction_1	18.952242611364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	NA	False	NA	6	True	AGTAAA	-19	NA	96010523	96023380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_54917.known	chr2	+	893	5	FSM	ENSG00000231584.9	ENST00000692942.1	980	5	82	5	1	0	multi-exon	FALSE	canonical	3	11	junction_1	24.0676130931175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	19	False	NA	6	True	AGTAAA	-19	NA	96010613	96023380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_54918.known	chr2	+	965	4	FSM	ENSG00000231584.9	ENST00000467292.7	1139	4	25	149	0	-127	multi-exon	FALSE	canonical	3	11	junction_1	22.9540604009158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCTCCCCACCGCCTC	-8	True	NA	NA	False	NA	NA	NA	96010550	96023249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673
transcript_54919.known	chr2	-	2394	9	FSM	ENSG00000188886.4	ENST00000342380.3	2394	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.39194109070751	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACCTCCTGTGTGC	10011	False	NA	-1	True	AATAAA	-20	NA	96138502	96122817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96124272_96129823_96129979_96130063_96130146_96132539_96132722_96133424_96133543_96133964_96134059_96135350_96135413_96137574_96137701_96138381
transcript_54920.known	chr2	-	3377	8	FSM	ENSG00000084090.14	ENST00000337288.10	3377	8	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_3	108.927049169691	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-3	True	NA	-39	True	AATAAA	-26	NA	96208827	96184858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
transcript_54921.nic	chr2	-	2983	8	NIC	ENSG00000084090.14	novel	3377	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	673.8293552525	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-3	True	NA	-39	True	AATAAA	-26	NA	96208827	96184858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208538
transcript_54923.known	chr2	+	3968	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_5	62.9700104988257	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	-34	True	NA	60	True	AATAAA	-30	NA	96266224	96274173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
transcript_54931.nic	chr2	-	1303	5	ISM	ENSG00000144028.15	ENST00000323853.10	7194	45	-3	26099	-3	-15220	5prime_fragment	FALSE	canonical	3	730	junction_2	57.9628113534877	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAGTTAAAGTA	-7	True	NA	NA	False	AATATA	-35	NA	96305549	96300436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_54932.nic	chr2	-	1773	4	NIC	ENSG00000144028.15	novel	4467	32	NA	NA	-3	-15220	intron_retention	FALSE	canonical	3	730	junction_1	62.1521430755922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAGTTAAAGTA	-7	True	NA	NA	False	AATATA	-35	NA	96305549	96300436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_96301717_96303158_96303331_96304704_96304869_96305392
transcript_54933.known	chr2	-	7194	45	FSM	ENSG00000144028.15	ENST00000323853.10	7194	45	0	0	0	0	multi-exon	TRUE	canonical	3	592	junction_38	143.400107772243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCCGACTGTCTTCAA	-4	True	NA	-8	True	AATAAA	-17	NA	96305546	96274337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_54934.known	chr2	+	1947	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	6	True	NA	33	True	ATTAAA	-39	NA	96325330	96328353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96325566_96326641
transcript_54935.known	chr2	+	2064	3	FSM	ENSG00000198885.10	ENST00000439118.3	2064	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	-8	True	NA	33	True	ATTAAA	-39	NA	96325316	96328353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96325566_96325746_96325850_96326641
transcript_54936.known	chr2	+	6030	18	FSM	ENSG00000121152.10	ENST00000240423.9	6030	18	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	34.9319655120188	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGCCTTTTTTTTT	-17	True	NA	5	True	AATAAA	-17	NA	96335765	96377091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_54938.nic	chr2	+	2697	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	58.6654346101099	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	9515	False	NA	-11	True	TATAAA	-23	NA	96335729	96373815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365968_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_54940.nic	chr2	+	2747	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	40.4136911947691	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	9525	False	NA	-11	True	TATAAA	-23	NA	96335739	96373815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_54942.nic	chr2	+	2682	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	53.6124114122788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	-17	True	NA	-11	True	TATAAA	-23	NA	96335765	96373815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_54944.nic	chr2	+	1488	11	ISM	ENSG00000121152.10	ENST00000240423.9	6030	18	-36	16918	-36	721	5prime_fragment	FALSE	canonical	3	116	junction_1	42.4942349031019	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	9515	False	NA	NA	False	AAAACA	-5	NA	96335729	96360173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_54945.nic	chr2	+	1445	11	ISM	ENSG00000121152.10	ENST00000435975.5	1852	14	-61	5860	-26	721	5prime_fragment	FALSE	canonical	3	87	junction_1	49.7414314229094	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	9525	False	NA	NA	False	AAAACA	-5	NA	96335739	96360173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_54949.known	chr2	+	2181	7	FSM	ENSG00000196843.17	ENST00000357485.8	2181	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCCTGAGGTGTGTGT	-1	True	NA	19	True	AATAAA	-21	NA	96536751	96552634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_54950.known	chr2	+	2038	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10.6395488626163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	-1	True	NA	15	True	AATAAA	-17	NA	96536751	96552630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_54953.known	chr2	-	1448	12	FSM	ENSG00000114982.19	ENST00000452268.5	1448	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.715052291461	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGATTCTCCCAGAG	42	False	96638345	NA	False	NA	NA	NA	96638331	96610725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96634148_96634179_96636920_96637186_96638282
transcript_54956.known	chr2	-	2020	9	FSM	ENSG00000114988.12	ENST00000377079.8	2020	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	80.7355830783428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTTGTAGTTACGAT	-6	True	NA	NA	False	NA	NA	NA	96740064	96706339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96713106_96713140_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_54957.known	chr2	-	2410	9	FSM	ENSG00000114988.12	ENST00000434524.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	81.9569246616782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGTAGCCTAAATGAAA	17	True	NA	-50	True	NA	NA	NA	96740041	96705974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737136_96737218_96737948_96738068_96739853
transcript_54958.known	chr2	-	2398	8	FSM	ENSG00000114988.12	ENST00000264963.9	2398	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	12.2790679696825	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-6	True	NA	-4	True	AATGAA	-28	NA	96740064	96705928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_54963.known	chr2	-	1008	6	FSM	ENSG00000114988.12	ENST00000440610.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	93.1892697685737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGGGACCCCGCATTCC	-6	True	NA	NA	False	NA	NA	NA	96740064	96707116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96739853
transcript_54964.known	chr2	-	892	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_3	38.1430057663117	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGTAAGTATTAG	2	True	NA	-7	True	ATTAAA	-19	NA	96858016	96847989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
transcript_54969.known	chr2	-	1431	9	FSM	ENSG00000144199.12	ENST00000414820.6	1431	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_8	62.3533278983568	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094882	97083582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
transcript_54973.known	chr2	-	1305	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	81.587564078387	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094882	97083582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
transcript_54982.known	chr2	-	956	3	FSM	ENSG00000144199.12	ENST00000483657.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	92	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGACTCCATCAGGAG	4	False	NA	NA	False	NA	NA	NA	97094835	97089755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97090326_97091461_97091713_97094700
transcript_54986.known	chr2	+	986	3	FSM	ENSG00000135976.21	ENST00000452478.2	986	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATCAGTGTGAAGTGA	13	False	NA	NA	False	ACTAAA	-10	NA	97113551	97118829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_97113937_97118063_97118179_97118343
transcript_5499.known	chr1	+	3728	7	FSM	ENSG00000134186.12	ENST00000370021.1	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	124.691619606131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCTTTTTTCTTTTT	11	True	NA	11	True	ATTAAA	-17	NA	108692340	108701803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_54992.nnic	chr2	-	1729	22	NNC	ENSG00000196912.13	novel	1661	21	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	12.560781927507	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGATGGAGAAAAAA	4	True	NA	NA	False	AATATA	-9	NA	97589869	97547564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_97547609_97547702_97547732_97549418_97549492_97549585_97549615_97550103_97550167_97551288_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97578905_97579044_97580461_97580569_97584943_97585118_97585283_97585399_97589524
transcript_55.known	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00160_+_0_700
transcript_55003.known	chr2	+	613	5	FSM	ENSG00000135940.7	ENST00000464949.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2860.55164041833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGGCTGGTCTTATTT	-4	True	NA	38	True	AGTAAA	-30	NA	97646096	97648191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_97646190_97646516_97646667_97647066_97647141_97647343_97647444_97647995
transcript_55005.known	chr2	+	690	4	FSM	ENSG00000135940.7	ENST00000258424.3	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	5484	junction_3	200.893559434399	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGGCGGGCTGAGG	1	True	NA	NA	False	AATAGA	-42	NA	97646061	97648383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_97646190_97647066_97647141_97647343_97647444_97647995
transcript_55008.known	chr2	-	2204	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_6	15.0083310198036	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	-59	True	NA	-1	True	NA	NA	NA	97664044	97655938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_55010.known	chr2	-	770	3	FSM	ENSG00000183513.9	ENST00000483527.5	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAGGATAAAACTTTTTC	-19	True	NA	94	True	NA	NA	NA	98608507	98600352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98600794_98604107_98604192_98608262
transcript_55011.known	chr2	-	1770	3	FSM	ENSG00000183513.9	ENST00000328709.8	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_2	61	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAATTCAGTGTTTTT	-24	True	NA	NA	False	AATACA	-25	NA	98608512	98599313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98600794_98604107_98604192_98608306
transcript_55026.nic	chr2	+	1205	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	258.943545970932	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	98608538	98618515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618145
transcript_55027.known	chr2	+	1133	6	FSM	ENSG00000115446.12	ENST00000357765.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	28.3224292743402	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-16	True	NA	NA	False	AATAAA	-17	NA	98608588	98618515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_55030.nnic	chr2	+	1249	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	258.874023416796	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-19	True	NA	NA	False	AATAAA	-17	NA	98608585	98618515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_98608727_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_55040.known	chr2	+	1276	6	FSM	ENSG00000115446.12	ENST00000409347.5	1276	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	276.84320472065	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	239	False	NA	NA	False	AATAAA	-17	NA	98608843	98618515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_98609012_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_55041.known	chr2	-	8388	16	FSM	ENSG00000071073.13	ENST00000393487.6	8388	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	3.78887259690209	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTATTTTATTATTA	-30	True	NA	-1	True	AATAAA	-17	NA	98731132	98619105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98625593_98625722_98625836_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
transcript_55052.known	chr2	-	3160	17	FSM	ENSG00000135951.16	ENST00000674128.1	3160	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	4.56891672062427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAATCTGGAGTAATAA	-1	True	NA	NA	False	NA	NA	NA	99141180	98997447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_98998222_99018199_99018350_99018535_99018641_99020279_99020483_99035229_99035440_99064938_99065125_99068887_99068999_99071705_99071875_99103966_99104119_99105358_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141067
transcript_55054.nic	chr2	-	1192	8	NIC	ENSG00000135951.16	novel	2390	17	NA	NA	-43	4061	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	4.43087497693452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	99141615	99105341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_55058.nic	chr2	-	1954	3	ISM	ENSG00000135951.16	ENST00000489926.6	588	5	-33	6632	-2	1093	5prime_fragment	FALSE	canonical	2	9	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATTGAAGTCACTGTTA	-3	True	NA	NA	False	AATAAA	-23	NA	99141182	99116034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_99117760_99127047_99127177_99141082
transcript_55063.known	chr2	-	390	3	FSM	ENSG00000135951.16	ENST00000489348.1	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTCTCTTTTTCTT	80	False	NA	-1	True	AATAAA	-15	NA	99154861	99148264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99148349_99154290_99154428_99154692
transcript_55064.known	chr2	-	255	3	FSM	ENSG00000135951.16	ENST00000483914.5	255	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	72	False	NA	0	True	AATAAA	-16	NA	99154869	99148263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99148349_99154290_99154428_99154836
transcript_55066.known	chr2	-	283	2	FSM	ENSG00000135951.16	ENST00000465216.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	2	True	NA	0	True	AATAAA	-16	NA	99154890	99148263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99148349_99154692
transcript_55067.known	chr2	+	1058	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	15.1079449297381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTCTCTGGTATTA	28	False	NA	NA	False	AAAAAG	-16	NA	99141749	99151047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
transcript_55068.known	chr2	+	1627	4	FSM	ENSG00000273045.7	ENST00000650052.2	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.05480466765633	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATTTTAAATCGTGC	-15	True	NA	30	True	AATAAA	-38	NA	99141706	99151669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99141938_99142284_99142402_99147401_99147494_99150482
transcript_5507.known	chr1	+	4831	6	FSM	ENSG00000134186.12	ENST00000370025.9	4831	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	41.5162618741139	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCAATCTTAAACTTT	-20	True	NA	NA	False	ATTAAA	-20	NA	108692309	108702928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_55082.nnic	chr2	+	973	7	NNC	ENSG00000185414.20	novel	4435	6	NA	NA	-29	12	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_6	153.882440699241	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTTTTAATTCCATAG	NA	False	NA	25	True	AATAAA	-16	NA	99181122	99197435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195757_99197153
transcript_55090.known	chr2	-	939	7	FSM	ENSG00000158411.11	ENST00000289359.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_4	39.7090110120556	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-20	True	NA	0	True	AATAAA	-19	NA	99181058	99169262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_55094.known	chr2	-	1083	7	FSM	ENSG00000158411.11	ENST00000413710.2	1083	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	157.234873852958	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	4	True	NA	0	True	AATAAA	-19	NA	99181034	99169262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173413_99173503_99173914_99174017_99180830
transcript_55095.known	chr2	+	567	6	FSM	ENSG00000185414.20	ENST00000473743.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	222.627042382546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAAGGTTTGTTGT	-1	True	NA	NA	False	NA	NA	NA	99181151	99195178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99181250_99186176_99186255_99186918_99187019_99188176_99188258_99194750_99194898_99195115
transcript_55096.known	chr2	+	4435	6	FSM	ENSG00000185414.20	ENST00000338148.8	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	35.9699874895725	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	-15	True	NA	24	True	AATAAA	-20	NA	99181183	99199561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572
transcript_55103.known	chr2	-	662	6	FSM	ENSG00000158411.11	ENST00000409107.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	107.334989635254	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTTAAGACCATGTC	-12	True	NA	-9	True	NA	NA	NA	99181050	99169444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
transcript_55105.nic	chr2	-	1305	6	NIC	ENSG00000158411.11	novel	1083	7	NA	NA	-287	0	intron_retention	FALSE	canonical	3	296	junction_3	39.9419578889168	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	NA	False	NA	0	True	AATAAA	-19	NA	99181345	99169262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_55108.nic	chr2	+	677	5	ISM	ENSG00000185414.20	ENST00000338148.8	4435	6	-122	4263	-90	120	5prime_fragment	FALSE	canonical	3	396	junction_1	39.2587569849072	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTTTTTTTTTA	NA	False	NA	7	True	ACTAAA	-2	NA	99181061	99195298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115
transcript_55116.known	chr2	+	803	4	FSM	ENSG00000144182.17	ENST00000415142.1	803	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8884444373331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGATATGGGTAATAT	-3	True	NA	NA	False	TATAAA	-35	NA	99155073	99162275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99155369_99155481_99155545_99156300_99156427_99161956
transcript_55118.known	chr2	+	1424	3	FSM	ENSG00000144182.17	ENST00000393473.6	1424	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTCTTTTAGTAACG	NA	False	NA	41	True	AATAAA	-37	NA	99154954	99163157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99155052_99156300_99156427_99161956
transcript_55120.known	chr2	+	885	3	FSM	ENSG00000144182.17	ENST00000434566.5	885	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACACTGTTTCCTGGA	-13	True	NA	NA	False	AATAAA	-9	NA	99154984	99162711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99155052_99155481_99155545_99161956
transcript_55123.known	chr2	+	482	2	FSM	ENSG00000144182.17	ENST00000449211.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGCTGTCCAACCC	-21	True	NA	NA	False	AAAAAG	-38	NA	99154976	99162363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99155052_99161956
transcript_55125.known	chr2	+	583	2	FSM	ENSG00000144182.17	ENST00000436234.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTATCAAAATCTGGCT	4	True	NA	NA	False	AGTAAA	-33	NA	99155080	99162075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99155545_99161956
transcript_55126.known	chr2	+	1497	6	FSM	ENSG00000185414.20	ENST00000409841.1	1497	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	189.19133172532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAAGGCAACTGCAGTT	4977	False	NA	13	True	AATAAA	-4	NA	99186175	99197423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195824_99196558
transcript_55130.known	chr2	+	5741	24	FSM	ENSG00000158417.11	ENST00000289371.11	5741	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	174.055072439633	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCCACCGATTGCTGC	-9	True	NA	NA	False	AATAAA	-21	NA	99337388	99401326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492_99368592_99369391_99369482_99371655_99371731_99376346_99376637_99379018_99379127_99379317_99379429_99382158_99382227_99382779_99382922_99389717_99389850_99390218_99390402_99390543_99390706_99392966_99393099_99394266_99394399_99394508_99394586_99394718_99394884_99396759_99396899_99398747_99398910_99399306
transcript_55132.nic	chr2	+	1863	10	ISM	ENSG00000158417.11	ENST00000289371.11	5741	24	-74	24909	-56	-14273	5prime_fragment	FALSE	canonical	0	0	junction_8	265.66009100092	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGATGAAGAAAGTGA	NA	False	NA	15	True	AGTAAA	-41	NA	99337314	99376417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492_99368592_99369391_99369482_99371655_99371731_99376346
transcript_55137.nic	chr2	+	1523	7	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	10	31712	-8	-22137	5prime_fragment	FALSE	canonical	3	478	junction_5	184.952921937809	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAAAATACCACAGC	-17	True	NA	NA	False	GATAAA	-3	NA	99337380	99368553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492
transcript_55139.nic	chr2	+	1399	6	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-56	35973	-56	-26398	5prime_fragment	FALSE	canonical	3	478	junction_5	192.091020092039	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGGAAAAAGCAAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	99337314	99364292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270
transcript_55143.nic	chr2	+	1181	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-56	36599	-56	-27024	5prime_fragment	FALSE	canonical	3	577	junction_4	165.5188810982	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGATAAGAAGAAAA	NA	False	NA	-25	True	AATGAA	-12	NA	99337314	99363666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_55144.nic	chr2	+	1324	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-3	36403	-3	-26828	5prime_fragment	FALSE	canonical	3	577	junction_4	165.5188810982	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTTCATGAAGTTGG	-30	True	NA	141	True	TATAAA	-38	NA	99337367	99363862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_55149.known	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	81.8882622846522	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	0	True	NA	32	True	CATAAA	-20	NA	99336333	99318981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
transcript_55160.nic	chr2	+	848	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-56	38756	-56	-29181	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAAACAAGCCAGGTC	NA	False	NA	70	True	NA	NA	NA	99337314	99361509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_55161.nic	chr2	+	914	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	38635	-1	-29060	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAGAAAAAGCGAAACT	-28	True	NA	NA	False	AAAAAG	-4	NA	99337369	99361630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_55162.nic	chr2	+	1104	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	38445	-1	-28870	5prime_fragment	FALSE	canonical	3	759	junction_2	132.22959830033	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTTAATACTTTAGAGG	-28	True	NA	NA	False	NA	NA	NA	99337369	99361820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_55163.known	chr2	-	739	4	FSM	ENSG00000115514.12	ENST00000438680.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	282.762955298053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAAGAGATTGATTTT	0	True	NA	NA	False	NA	NA	NA	99336333	99321943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99322210_99327534_99327654_99332983_99333243_99336238
transcript_55164.known	chr2	-	1111	4	FSM	ENSG00000115514.12	ENST00000409434.5	1111	4	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_2	47.3732226286351	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	0	True	NA	-3	True	AATAAA	-28	NA	99336333	99321533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99322210_99327534_99327654_99333021_99333243_99336238
transcript_55168.nic	chr2	+	323	2	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	39927	-1	-30352	5prime_fragment	FALSE	canonical	3	1040	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAAAGCAGGACTT	-28	True	NA	43	True	AAAAAG	-7	NA	99337369	99360338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_99337590_99360235
transcript_55169.known	chr2	-	599	2	FSM	ENSG00000115514.12	ENST00000465183.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGGAGGGCTAGGGAG	-23	True	NA	NA	False	AAGAAA	-42	NA	99336356	99332761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_99333243_99336238
transcript_55171.known	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	29.3995464817628	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-22	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
transcript_55174.known	chr2	+	1038	6	FSM	ENSG00000115539.14	ENST00000264254.11	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_5	83.9008939165728	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCATTTATATTT	18	True	NA	26	True	ATTAAA	-26	NA	100562992	100576739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_100563074_100566502_100566630_100568930_100569022_100569577_100569722_100571589_100571799_100576353
transcript_55179.known	chr2	+	1291	5	FSM	ENSG00000071082.11	ENST00000264258.8	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	7790	junction_4	2551.43057910655	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	5	True	NA	13	True	ATTAAA	-16	NA	101002288	101007267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101006349
transcript_55180.known	chr2	+	770	5	FSM	ENSG00000071082.11	ENST00000409650.5	770	5	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	5615.70478101369	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAATATAATGTCATGT	9	True	NA	73	True	NA	NA	NA	101002292	101018289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017888
transcript_55181.known	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	5577.42634980508	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	-1	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
transcript_55190.known	chr2	+	716	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	9956	junction_1	1790.00856608751	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	9	True	NA	26	True	AATAAA	-14	NA	101002292	101006418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
transcript_55194.known	chr2	+	825	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	7790	junction_3	2806.58416347464	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTTTGTTCTTTTT	9	True	NA	27	True	AATAAA	-15	NA	101002292	101006419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
transcript_55195.known	chr2	+	717	4	FSM	ENSG00000071082.11	ENST00000441435.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6472.95781609064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGGTACACCATGAATT	185	False	NA	35	True	AATAAA	-28	NA	101002738	101024032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101023624
transcript_55203.known	chr2	-	2990	7	FSM	ENSG00000135953.11	ENST00000438943.5	2990	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	30.3589635308366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCTTTATTTTTAGT	-16	True	NA	NA	False	AAAAAG	-3	NA	102736878	102717037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
transcript_55208.known	chr2	-	5293	6	FSM	ENSG00000135953.11	ENST00000258436.10	5293	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	12.7373466624725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACTGTCATTTATTC	-26	True	NA	-5	True	AATAAA	-16	NA	102736888	102714629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_55212.nic	chr2	-	1484	6	NIC	ENSG00000135953.11	novel	1183	7	NA	NA	4	410	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	26.2328038913114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGCAACAAAATTTGAGA	-22	True	NA	-26	True	ATTAAA	-27	NA	102736884	102718403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_55213.nic	chr2	-	1492	6	NIC	ENSG00000135953.11	novel	2440	7	NA	NA	0	410	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	36.4889024225175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGCAACAAAATTTGAGA	-16	True	NA	-26	True	ATTAAA	-27	NA	102736878	102718403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732393_102736645
transcript_55220.known	chr2	+	3198	6	FSM	ENSG00000170417.16	ENST00000409173.5	3198	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	12.6585939187573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCTCCATATTGTATT	-14	True	NA	NA	False	AATAAA	-40	NA	102736910	102817420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_102737014_102758388_102758474_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_55222.known	chr2	+	3112	5	FSM	ENSG00000170417.16	ENST00000409528.5	3112	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	7.49583217528247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCATCTCTCCATATTG	NA	False	NA	NA	False	AATAAA	-36	NA	102736907	102817416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_55224.nic	chr2	+	870	5	NIC	ENSG00000170417.16	novel	3198	6	NA	NA	0	-52	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	10.3198837202751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTTTCCAAAAATGTT	-14	True	NA	NA	False	ATTAAA	-21	NA	102736910	102843841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102843411
transcript_55225.known	chr2	+	670	4	FSM	ENSG00000170417.16	ENST00000469971.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	13.29995822884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGAAGTTCTGGCCAG	7	True	NA	NA	False	NA	NA	NA	102736931	102775518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102775129
transcript_55226.known	chr2	-	642	3	FSM	ENSG00000224509.3	ENST00000456519.2	642	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTACGCATATGCT	NA	False	NA	NA	False	AATAAA	-14	NA	105038496	104936240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_104936766_104945003_104945078_105038453
transcript_55232.known	chr2	+	1414	11	FSM	ENSG00000135972.9	ENST00000258455.8	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_8	95.2286196476669	1855	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCGCTTTATTTTTTT	-2	True	NA	20	True	AATAAA	-26	NA	105038068	105099960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089919_105089996_105092400_105092570_105093529_105093639_105097154_105097325_105099669
transcript_55246.nnic	chr2	-	1262	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	-18	1	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGTTGATAATGTAATA	-10	True	NA	1	True	AATATA	-23	NA	105337493	105334025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr2_-_105335069_105337274
transcript_55249.nnic	chr2	+	1739	6	NNC	ENSG00000135974.10	novel	854	5	NA	NA	-2	-448	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	122.750804478016	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGTAGGTCTGTTATT	-13	True	NA	12	True	AATAAA	-14	NA	105337537	105348763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314_105345390_105347665
transcript_55251.known	chr2	+	854	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_3	105.134140506307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	-19	True	NA	79	True	TTTAAA	-43	NA	105337531	105345596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
transcript_55256.nnic	chr2	+	1865	5	NNC	ENSG00000135974.10	novel	4587	4	NA	NA	-2	-448	intron_retention	FALSE	canonical	2	13	junction_4	112.425530908242	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGTAGGTCTGTTATT	-13	True	NA	12	True	AATAAA	-14	NA	105337537	105348763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314_105345390_105347665
transcript_55257.nnic	chr2	+	1090	5	NNC	ENSG00000135974.10	novel	4587	4	NA	NA	-2	362	intron_retention	FALSE	canonical	3	17	junction_4	110.709078218545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	-13	True	NA	NA	False	AATAAA	-16	NA	105337537	105349573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314_105345390_105349250
transcript_55258.known	chr2	+	4587	4	FSM	ENSG00000135974.10	ENST00000258457.7	4587	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	17.2497987105808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAACTTTCTACTTT	-11	True	NA	NA	False	ATTAAA	-15	NA	105337539	105349211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314
transcript_55262.known	chr2	-	1582	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	47.6471405228058	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-4	True	NA	-14	True	AATAAA	-17	NA	105399051	105360825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
transcript_55263.known	chr2	-	1478	7	FSM	ENSG00000115641.19	ENST00000322142.13	1478	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	50.8748464371147	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	1278	False	NA	0	True	AATAAA	-31	NA	105399061	105360811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398969
transcript_55264.known	chr2	-	1531	6	FSM	ENSG00000115641.19	ENST00000393353.7	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	34.6433254754794	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-4	True	NA	-14	True	AATAAA	-17	NA	105399051	105360825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
transcript_55265.known	chr2	-	1367	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	37.3127324113365	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGACTTGCAATAAAG	-3	True	NA	-49	True	NA	NA	NA	105399050	105360860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
transcript_55270.known	chr2	+	753	4	FSM	ENSG00000119147.10	ENST00000238044.8	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAGAATTCATTTGGGT	-9	True	NA	NA	False	AATAAA	-21	NA	106065687	106078155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_106065844_106071843_106071892_106073885_106074044_106077764
transcript_55272.known	chr2	-	1839	15	FSM	ENSG00000115652.15	ENST00000409501.7	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_10	35.7485549872085	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCCAAGGTCTACTT	3	True	NA	NA	False	GATAAA	-42	NA	106194299	106093507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_55273.known	chr2	-	2053	15	FSM	ENSG00000115652.15	ENST00000283148.12	2053	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_13	87.4270541418294	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACTTCCAGTTTTA	1	True	NA	-19	True	AATAAA	-17	NA	106194301	106093310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164800_106166055_106166084_106194147
transcript_55274.nnic	chr2	-	1936	14	NIC	ENSG00000115652.15	novel	2053	15	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	100.990186411746	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACTTCCAGTTTTA	-1	True	NA	-19	True	AATAAA	-17	NA	106194303	106093310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_55275.nnic	chr2	-	1886	13	NIC	ENSG00000115652.15	novel	1839	15	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	117.05435584472	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTTTTAAAGGTTGT	-1	True	NA	-11	True	AATAAA	-25	NA	106194303	106093302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_106094158_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_55277.known	chr2	+	2539	8	FSM	ENSG00000198203.10	ENST00000251481.11	2539	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.45229884959845	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTGTAAAATTTTTGT	-1	True	NA	NA	False	AATAAA	-22	NA	108288894	108309915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300837_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_55286.nic	chr2	+	3618	8	ISM	ENSG00000135968.22	ENST00000687399.1	6839	22	-562	33822	-562	168	5prime_fragment	FALSE	canonical	3	135	junction_7	13.3508388485212	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGGAGAAAATAAATAAGA	NA	False	NA	NA	False	AAAAAG	-14	NA	108448544	108475562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826_108472900_108475534
transcript_55287.nic	chr2	+	2944	7	FSM	ENSG00000135968.22	ENST00000689620.1	4108	7	84	1080	6	0	multi-exon	FALSE	canonical	3	142	junction_1	11.5998084275369	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTATGGTTTTGCAGAT	-17	True	NA	17	True	AGTAAA	-21	NA	108449190	108472899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826
transcript_55290.known	chr2	+	786	6	FSM	ENSG00000135968.22	ENST00000409821.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	56.0057139941988	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTATACACCAAGAAGAG	23	True	NA	NA	False	NA	NA	NA	108449230	108470062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650
transcript_55302.known	chr2	-	558	3	FSM	ENSG00000214184.3	ENST00000322353.3	558	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTATTAAAATTTCTCA	NA	False	NA	NA	False	AATAAA	-9	NA	108534196	108507514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_108507622_108511929_108512013_108533828
transcript_55304.known	chr2	+	4461	10	FSM	ENSG00000169756.16	ENST00000544547.5	4461	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	25.9220102863175	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAACCTGTTGTATAT	-4	True	NA	26	True	AATAAA	-15	NA	108534354	108687238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108534595_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_55305.known	chr2	+	1627	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	36.9397240092092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAATCTTATACAA	-2	True	NA	NA	False	AAGAAA	-29	NA	108621265	108684448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_55306.known	chr2	+	11708	29	FSM	ENSG00000153201.16	ENST00000283195.11	11708	29	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	101.470388764005	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAAGTGGTACTTTAT	-28	True	NA	33	True	AATAAA	-15	NA	108719481	108785809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751527_108751704_108751870_108751995_108752997_108753160_108753425_108753564_108753824_108753972_108754904_108755085_108755175_108755260_108758412_108758549_108762100_108762196_108763236_108768389_108771700_108771872_108772488_108772582_108772867_108773047_108775731_108775937_108777129_108777232_108781268_108781430_108782127_108782402_108782527_108782863_108783595
transcript_55314.known	chr2	+	2375	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_13	20.2338370870506	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-5	True	NA	NA	False	AATAAA	-20	NA	108786770	108876578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_55317.nic	chr2	+	2288	15	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	43.4262217409468	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-29	True	NA	NA	False	AATAAA	-20	NA	108786746	108876578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_108786805_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_55318.nnic	chr2	+	2395	15	NNC	ENSG00000163006.12	novel	2375	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	39.564530084614	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-7	True	NA	NA	False	AATAAA	-20	NA	108786768	108876578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_108786934_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_55319.known	chr2	+	2250	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	38.9607601106853	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-19	True	NA	NA	False	AATAAA	-20	NA	108786756	108876578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_55321.nnic	chr2	+	2289	14	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_10	41.4794452554301	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-36	True	NA	NA	False	AATAAA	-20	NA	108786739	108876578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_55325.nic	chr2	+	2343	14	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	41.5855858050066	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-31	True	NA	NA	False	AATAAA	-20	NA	108786744	108876578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_108786916_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_55328.nnic	chr2	+	2254	14	NNC	ENSG00000163006.12	novel	2250	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	51.743221263713	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGGTTAAATAATACTG	-7	True	NA	NA	False	AATAAA	-18	NA	108786768	108876576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_108786934_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_5533.known	chr1	+	2043	5	FSM	ENSG00000134186.12	ENST00000467302.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	134.444226354277	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	-3	True	NA	NA	False	NA	NA	NA	108692326	108697504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276
transcript_55345.known	chr2	-	3014	11	FSM	ENSG00000186522.15	ENST00000397712.7	3014	11	0	0	0	0	multi-exon	FALSE	canonical	1	157	junction_2	86.6835624556351	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTGTATACTTTAAAT	-35	True	NA	-36	True	AATAAA	-17	NA	109613966	109542798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_55347.known	chr2	-	2719	10	FSM	ENSG00000186522.15	ENST00000397714.6	2719	10	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_9	139.558651770324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	4	True	NA	NA	False	AATAAA	-40	NA	109613927	109542985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109613797
transcript_55350.known	chr2	-	823	2	FSM	ENSG00000282033.1	ENST00000632044.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTCTCAGGCACTTTT	NA	False	NA	2	True	AATAAA	-16	NA	109760364	109758798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_109759557_109760299
transcript_55351.known	chr2	-	2522	20	FSM	ENSG00000144061.14	ENST00000445609.7	2522	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	22.02152057468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGTTAAAGTGATCCA	-14	True	NA	NA	False	AATAAA	-20	NA	110205013	110123347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163136_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_55355.known	chr2	-	742	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	13.7679176187089	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTGTGGTGACTCAT	0	True	NA	NA	False	CATAAA	-25	NA	110204999	110178040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
transcript_55357.nic	chr2	-	463	4	NIC	ENSG00000144061.14	novel	486	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	31.6262900483478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATAATTTTATTTTTT	7493	False	NA	NA	False	AATAAA	-18	NA	110205045	110178753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_110178936_110179623_110179685_110201420_110201495_110204899
transcript_55358.known	chr2	-	427	2	FSM	ENSG00000175701.11	ENST00000611969.5	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	0	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCCTTTTATTTTTTC	-9	True	NA	-21	True	AATAAA	-14	NA	110212547	110211528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110211623_110212214
transcript_55359.known	chr2	-	7305	23	FSM	ENSG00000183054.12	ENST00000329516.8	7305	23	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_22	57.3380579768968	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	110577222	110513801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110576952
transcript_5536.nic	chr1	+	2025	4	ISM	ENSG00000134186.12	ENST00000370022.9	1591	5	-32	0	-18	0	intron_retention	TRUE	canonical	3	245	junction_2	41.6519974177576	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	-38	True	NA	NA	False	NA	NA	NA	108692291	108697504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276
transcript_55362.known	chr2	-	3762	25	FSM	ENSG00000169679.15	ENST00000302759.11	3762	25	0	0	0	0	multi-exon	FALSE	canonical	2	632	junction_18	130.627412258428	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTGTTCTTCATTGC	-1	True	NA	-34	True	AATAAA	-17	NA	110678063	110637527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_55374.known	chr2	-	2501	20	FSM	ENSG00000169679.15	ENST00000466333.5	2501	20	0	0	0	0	multi-exon	FALSE	canonical	2	632	junction_13	113.76719680669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGAGTTGTCTTTTGT	34	False	NA	NA	False	AATAAA	-24	NA	110678028	110642113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_55378.known	chr2	-	1999	10	FSM	ENSG00000169679.15	ENST00000465029.5	1999	10	0	0	0	0	multi-exon	FALSE	canonical	2	632	junction_3	148.471304955071	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTCATTTTTTTCT	-1	True	NA	NA	False	TATAAA	-4	NA	110678063	110660867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_5538.nnic	chr1	+	2035	4	NNC	ENSG00000134186.12	novel	2043	5	NA	NA	-18	0	intron_retention	FALSE	canonical	3	30	junction_2	138.641824697872	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	-38	True	NA	NA	False	NA	NA	NA	108692291	108697504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_108692868_108695701_108695781_108696042_108696195_108696276
transcript_55381.nic	chr2	-	933	9	ISM	ENSG00000169679.15	ENST00000465029.5	1999	10	-33	5520	-33	-426	5prime_fragment	FALSE	canonical	2	632	junction_2	156.455065434137	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAGCAAATGCTTTT	NA	False	NA	NA	False	AGTAAA	-24	NA	110678096	110666387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_55384.nic	chr2	-	955	5	ISM	ENSG00000169679.15	ENST00000465029.5	1999	10	-33	9269	-33	388	5prime_fragment	FALSE	canonical	3	964	junction_4	94.6239266781928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCCATCCAAT	NA	False	NA	NA	False	NA	NA	NA	110678096	110670136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_55388.nnic	chr2	+	2180	19	NNC	ENSG00000153093.20	novel	4885	19	NA	NA	-32	3059	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	43.4360605721179	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGAATATAGGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	110732506	111104310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111104052
transcript_55390.nic	chr2	+	2101	18	ISM	ENSG00000153093.20	ENST00000389811.8	2714	19	30	1103	30	-982	5prime_fragment	FALSE	canonical	3	74	junction_16	34.965331322092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTAGTGATTTCTTT	-9	True	NA	NA	False	NA	NA	NA	110732602	111093241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864
transcript_55394.nnic	chr2	+	2487	17	NNC	ENSG00000153093.20	novel	2714	19	NA	NA	0	3591	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	50.5011989337877	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTTTATGGACTGT	0	True	NA	NA	False	AATAAA	-15	NA	110732572	111104842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111092864_111092967_111104052
transcript_554.known	chr1	+	1088	7	FSM	ENSG00000116288.13	ENST00000493678.5	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	3430	junction_1	387.569527812609	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	1	True	NA	NA	False	ATTAAA	-15	NA	7961691	7985505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_5540.known	chr1	+	2489	19	FSM	ENSG00000116266.11	ENST00000370008.4	2489	19	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_9	68.2316316348624	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	-10	True	NA	6	True	AATAAA	-17	NA	108746673	108809523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
transcript_55404.known	chr2	+	2188	11	FSM	ENSG00000153093.20	ENST00000340561.8	2188	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	46.5076337819933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCTGCTGATAAAT	22	True	NA	11	True	AATAAA	-26	NA	110732633	110888017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110886780
transcript_55405.nic	chr2	+	2227	8	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-127	84976	-32	6860	5prime_fragment	TRUE	canonical	3	125	junction_3	20.9108896540164	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAACTTAAAATGGAC	NA	False	NA	NA	False	AATAAA	-14	NA	110732506	110803041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651
transcript_55411.known	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	NA	False	NA	0	True	ATTAAA	-23	NA	111495086	111429308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_111429621_111494884
transcript_55412.known	chr2	+	2972	19	FSM	ENSG00000153208.18	ENST00000439966.5	2972	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	9.80504405338849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAAGCTGTCATTAAA	22	False	NA	NA	False	NA	NA	NA	111898663	112029000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_111898797_111929119_111929305_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350
transcript_55413.known	chr2	+	3826	19	FSM	ENSG00000153208.18	ENST00000295408.9	3826	19	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	7.75492674942123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGTGAATGGAAAGAT	-3	True	NA	NA	False	AATAAA	-22	NA	111898606	112029561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350
transcript_55414.known	chr2	+	3600	20	FSM	ENSG00000153208.18	ENST00000421804.6	3600	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	10.3174005186677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATATGTTGAACTTACTT	-2	True	NA	10	True	AATAAA	-14	NA	111898607	112029366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350_112029294_112029323
transcript_55417.known	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	69	junction_2	5.59016994374947	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-33	True	NA	-6	True	AATAAA	-32	NA	112255087	112215864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_55421.known	chr2	-	319	2	FSM	ENSG00000144161.14	ENST00000495264.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGGAAATGGATATGAG	-6	True	NA	NA	False	AAAAAG	-7	NA	112255060	112250106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_112250273_112254907
transcript_55423.known	chr2	-	847	7	FSM	ENSG00000144161.14	ENST00000474234.5	847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	37.7874170708834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTGTAAGTTTTAT	31	True	NA	17	True	AAGAAA	-2	NA	112255023	112233325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112253969_112254100_112254899
transcript_55427.known	chr2	+	7527	15	FSM	ENSG00000125630.16	ENST00000263331.10	7527	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_3	39.802830378284	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGCAAATATTTTCT	8	True	NA	21	True	TATAAA	-16	NA	112542464	112579818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846
transcript_55429.known	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	619	junction_1	55.2509426767242	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-23	True	NA	17	True	AATAAA	-21	NA	112584440	112589040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
transcript_55432.nnic	chr2	+	702	4	NNC	ENSG00000125611.16	novel	523	4	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319.149216233132	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-24	True	NA	17	True	AATAAA	-21	NA	112584439	112589040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_112584650_112585973_112586125_112586199_112586366_112588865
transcript_55436.known	chr2	+	529	4	FSM	ENSG00000125611.16	ENST00000469030.1	529	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	345.902683809575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-12	True	NA	17	True	AATAAA	-21	NA	112584871	112589040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112584919_112585973_112586115_112586199_112586366_112588865
transcript_55438.known	chr2	+	748	3	FSM	ENSG00000125611.16	ENST00000454841.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	52	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	5	True	NA	17	True	AATAAA	-21	NA	112584468	112589040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112584650_112585973_112586366_112588865
transcript_55440.nic	chr2	+	3410	12	NIC	ENSG00000144136.11	novel	3297	11	NA	NA	-54	0	combination_of_known_junctions	TRUE	canonical	3	46	junction_5	359.765396468126	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	-2	True	NA	54	True	AATAAA	-23	NA	112645884	112663825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112652888_112652948_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_55441.known	chr2	+	3297	11	FSM	ENSG00000144136.11	ENST00000272542.8	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_6	162.720496557748	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	-1	True	NA	54	True	AATAAA	-23	NA	112645938	112663825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_55443.known	chr2	-	4723	9	FSM	ENSG00000169607.13	ENST00000302450.11	4723	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	2.91279504943276	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGAATTAGAGTTAACT	16	True	NA	-3	True	AATAAA	-19	NA	112764609	112736348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_55445.nic	chr2	-	1434	5	NIC	ENSG00000169607.13	novel	4723	9	NA	NA	-5	4374	intron_retention	FALSE	canonical	0	0	junction_2	20.7966343430854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGTAATAAAGGAAATG	2	True	NA	-51	True	TATAAA	-29	NA	112764623	112752400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_112752475_112755976_112757156_112760712_112760765_112762502_112762570_112764561
transcript_55446.nic	chr2	-	1550	5	ISM	ENSG00000169607.13	ENST00000302450.11	4723	9	-71	16052	-16	4374	5prime_fragment	FALSE	canonical	3	47	junction_4	3.53553390593274	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGTAATAAAGGAAATG	-4	True	NA	-51	True	TATAAA	-29	NA	112764680	112752400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_55448.known	chr2	-	2017	7	FSM	ENSG00000115008.6	ENST00000263339.4	2017	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.7950549357115	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGACACATAGTTATT	0	True	NA	-13	True	AATAAA	-14	NA	112784493	112773924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_112775268_112777986_112778112_112779495_112779667_112781603_112781827_112782715_112782765_112783723_112783779_112784442
transcript_55456.known	chr2	+	1436	16	FSM	ENSG00000136682.16	ENST00000456188.5	1436	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	551.280408584315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	1	False	NA	NA	False	AATAAA	-18	NA	113437821	113495799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113457064_113457210_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_55465.known	chr2	+	1740	16	FSM	ENSG00000136682.16	ENST00000358604.7	1740	16	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	504.316285237306	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	9	False	NA	NA	False	ATTAAA	-13	NA	113437790	113496119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_55469.known	chr2	+	1827	15	FSM	ENSG00000136682.16	ENST00000259199.9	1827	15	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_6	441.241043153587	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTTTGTCAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	113437690	113496204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_55477.known	chr2	+	1665	14	FSM	ENSG00000136682.16	ENST00000416503.6	1665	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	518.530684729378	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113437762	113496171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_5548.known	chr1	+	7152	15	FSM	ENSG00000121957.15	ENST00000264126.9	7152	15	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	15.3749066697018	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGTTGAAGTTGGCA	-12	True	NA	10	True	AGTAAA	-23	NA	108876984	108934545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999_108924215_108929700
transcript_55498.known	chr2	+	880	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	1290	junction_1	162.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	18	False	NA	NA	False	TATAAA	-26	NA	113437838	113444375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113438023_113441350_113441438_113443766
transcript_5550.nic	chr1	+	2601	15	NIC	ENSG00000121957.15	novel	2806	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	34.9069462708955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGTCTTACTAAAAAT	-17	True	NA	-3	True	AAAAAG	-6	NA	108877140	108930382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_108877229_108885506_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999_108924215_108929700
transcript_5551.nic	chr1	+	2298	14	ISM	ENSG00000121957.15	ENST00000642355.1	5609	16	160	9974	-5	0	5prime_fragment	FALSE	canonical	3	135	junction_1	15.3942277662996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCAGCTGCTATTC	-17	True	NA	10	True	AGTAAA	-18	NA	108877140	108924361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999
transcript_55515.known	chr2	-	2078	3	FSM	ENSG00000240356.6	ENST00000416673.6	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGTTAACTTTAGGCAT	NA	False	NA	NA	False	CATAAA	-6	NA	113627040	113610501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_113612248_113625608_113625730_113626829
transcript_55519.nnic	chr2	-	1106	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-48	163	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	4	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTTTTATCCAAATCAT	NA	False	NA	NA	False	NA	NA	NA	113627138	113611520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_55522.nnic	chr2	-	943	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	4	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	NA	False	NA	NA	False	CATAAA	-45	NA	113627138	113611683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_55529.known	chr2	-	738	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	12	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	NA	False	NA	NA	False	CATAAA	-45	NA	113627090	113611683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_113612248_113625608_113625730_113627037
transcript_55531.known	chr2	+	2141	9	FSM	ENSG00000144134.19	ENST00000683472.1	2141	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	53.3215481770738	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-6	True	NA	13	True	AGTAAA	-17	NA	113627265	113643392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
transcript_55532.known	chr2	+	1944	8	FSM	ENSG00000144134.19	ENST00000452831.5	1944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.6627368269823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTAATAGGGTTTTG	11	False	NA	-51	True	NA	NA	NA	113627282	113643328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634156_113634233_113635050_113635131_113641352_113641451_113641780_113641865_113642030
transcript_55535.known	chr2	+	1979	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	57.849421393438	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	1	False	NA	13	True	AGTAAA	-17	NA	113627239	113643392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
transcript_55536.nic	chr2	+	2003	7	NIC	ENSG00000144134.19	novel	2141	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	14	junction_5	65.2295093411631	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	3	False	NA	13	True	AGTAAA	-17	NA	113627241	113643392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113641352_113641481_113641780_113641865_113642030
transcript_55539.known	chr2	+	6589	12	FSM	ENSG00000115091.12	ENST00000263238.7	6589	12	0	0	0	0	multi-exon	TRUE	canonical	3	1007	junction_6	77.0678567591869	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCCAAATAAATTCCTG	-13	True	NA	NA	False	NA	NA	NA	113890088	113962596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113890324_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_55542.known	chr2	+	1530	12	FSM	ENSG00000115091.12	ENST00000535589.3	1530	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	331.121036021374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAATAAGTGTATCAC	355	False	NA	NA	False	TTTAAA	-42	NA	113890597	113957591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_113890779_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_55547.known	chr2	+	3052	26	FSM	ENSG00000175497.17	ENST00000310323.12	3052	26	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.9519728227016	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAAATGTGGATTTCA	272	False	NA	56	True	ATTAAA	-14	NA	115162106	115842900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_115162273_115309238_115309354_115343816_115343913_115499509_115499605_115525897_115525973_115689686_115689740_115689839_115689922_115727815_115727937_115739738_115739894_115746085_115746184_115753173_115753298_115762571_115762611_115768296_115768405_115777207_115777300_115777786_115777835_115780873_115780996_115782351_115782400_115791080_115791180_115791286_115791357_115814792_115814988_115815674_115815730_115836156_115836257_115836506_115836566_115836673_115836747_115840749_115840824_115842210
transcript_55550.known	chr2	-	730	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGGTGTACACAGCCC	-7	True	NA	-5	True	AATAAA	-15	NA	115161343	115144047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_115144369_115144858_115145028_115161103
transcript_55557.known	chr2	+	3753	14	FSM	ENSG00000088205.13	ENST00000263239.7	3753	14	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_7	86.6783484768518	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCGTTTATGGATGCTT	-22	True	NA	22	True	ATTAAA	-18	NA	117814690	117832377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_117814863_117817443_117817729_117819648_117819793_117821160_117821297_117821649_117821751_117821861_117822062_117822146_117822262_117824568_117824709_117824939_117825102_117825446_117825600_117826268_117826383_117828948_117829006_117829288_117829467_117830581
transcript_5557.known	chr1	-	2494	13	FSM	ENSG00000121940.17	ENST00000675654.1	2494	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	49.1559310313166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGCCATTGTGCCC	-44	True	NA	NA	False	NA	NA	NA	108963504	108932014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108962308_108962470_108963360
transcript_55572.nic	chr2	+	452	2	ISM	ENSG00000088205.13	ENST00000263239.7	3753	14	-33	14687	-33	-5090	5prime_fragment	FALSE	canonical	3	951	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAGAAAAATGG	-55	True	NA	NA	False	AAAAAG	-6	NA	117814657	117817690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_117814863_117817443
transcript_55574.known	chr2	-	6833	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	14.2835185998298	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGACTCTTTCTTGG	-7	True	NA	90	True	GATAAA	-16	NA	118014070	117915480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_5558.known	chr1	-	4994	13	FSM	ENSG00000121940.17	ENST00000369969.7	4994	13	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_12	39.6347035086958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATAAAATTTTTCCTTT	-24	True	NA	NA	False	AAGAAA	-19	NA	108963484	108929504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
transcript_55582.known	chr2	+	1500	1	FSM	ENSG00000279227.1	ENST00000623784.1	1500	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCCAAATGTGTTGT	NA	False	NA	4	True	AATAAA	-19	NA	118014173	118015673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118014200_118015700
transcript_55584.known	chr2	+	3185	6	FSM	ENSG00000125629.16	ENST00000485520.5	3185	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	82.4984848345714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	-5	True	NA	4	True	AATAAA	-17	NA	118088473	118110997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118088542_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_55586.known	chr2	+	3562	6	FSM	ENSG00000125629.16	ENST00000245787.9	3562	6	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	36.1020775025482	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	-8	True	NA	4	True	AATAAA	-17	NA	118088470	118110997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118088542_118096418_118096801_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_55590.nnic	chr2	+	1410	6	NNC	ENSG00000125629.16	novel	627	6	NA	NA	109	127	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	80.8860927477647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAATTTTTAAATTAAT	115	False	NA	NA	False	ATTAAA	-16	NA	118088658	118108594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_118088981_118096418_118096801_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_55593.known	chr2	+	574	5	FSM	ENSG00000125629.16	ENST00000411929.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	83.3677845453506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAGATATACCAACA	-27	True	NA	NA	False	NA	NA	NA	118088451	118108372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_556.known	chr1	+	1127	7	FSM	ENSG00000116288.13	ENST00000338639.10	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	1134.28544565388	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	20	True	NA	NA	False	ATTAAA	-15	NA	7961710	7985505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_55600.known	chr2	+	1871	5	FSM	ENSG00000115107.20	ENST00000393107.2	1871	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	6.49519052838329	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTGTGCTGTGGTGGG	10	True	NA	NA	False	NA	NA	NA	119223852	119263698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119223889_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_55604.known	chr2	-	685	6	FSM	ENSG00000186132.15	ENST00000334816.12	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	19.6712988894989	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-7	True	NA	-6	True	AATAAA	-17	NA	119366834	119302224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366789
transcript_55605.nnic	chr2	-	976	5	NIC	ENSG00000186132.15	novel	685	6	NA	NA	-342	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	39.6894192449323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	5148	False	NA	-6	True	AATAAA	-17	NA	119367176	119302224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_119302549_119311621_119311704_119317465_119317504_119339826_119339972_119366789
transcript_55606.known	chr2	+	576	5	FSM	ENSG00000155368.18	ENST00000409094.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2826.38872945672	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTTCCTTGAGTAG	6	True	NA	-9	True	GGGGCT	-9	NA	119366988	119372481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367061_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_55607.known	chr2	+	774	4	FSM	ENSG00000155368.18	ENST00000460901.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	2659.25883575773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACAGATTAGGGGCTA	98	False	NA	-36	True	NA	NA	NA	119367080	119372454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367464_119368187_119368306_119370739_119370803_119372244
transcript_55608.known	chr2	+	599	4	FSM	ENSG00000155368.18	ENST00000393103.2	599	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2701.17620470951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATAACCAGTTAAACC	-4	True	NA	-83	True	NA	NA	NA	119367676	119372407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367932_119368187_119368306_119370739_119370803_119372244
transcript_55609.known	chr2	+	564	4	FSM	ENSG00000155368.18	ENST00000355857.8	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	139.75534177825	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAGTGATCTGAGTT	-6	True	NA	53	True	ATTAAA	-21	NA	119366976	119372543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367061_119368187_119368306_119370739_119370803_119372244
transcript_55610.known	chr2	+	654	4	FSM	ENSG00000155368.18	ENST00000535617.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2702.58917007788	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	NA	False	NA	60	True	ATTAAA	-28	NA	119366923	119372550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367091_119368187_119368306_119370739_119370803_119372244
transcript_55611.known	chr2	+	740	5	FSM	ENSG00000155368.18	ENST00000535757.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2835.04347409348	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	NA	False	NA	60	True	ATTAAA	-28	NA	119366923	119372550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119367091_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_55612.known	chr2	+	1687	2	FSM	ENSG00000171227.7	ENST00000306406.5	1687	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTGCCCAGAAGTAG	-5	True	NA	18	True	ATTAAA	-18	NA	119431853	119438504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119431925_119436888
transcript_55619.known	chr2	+	1346	2	FSM	ENSG00000144120.13	ENST00000401466.5	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	-4	True	NA	34	True	AATAAA	-16	NA	119679166	119682118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119679226_119680831
transcript_55620.known	chr2	+	1363	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	0	True	NA	34	True	AATAAA	-16	NA	119679200	119682118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119679277_119680831
transcript_55621.known	chr2	+	791	2	FSM	ENSG00000144120.13	ENST00000445518.1	791	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCAACACTAACCATCC	-10	True	NA	NA	False	GGGGCT	-37	NA	119679190	119681195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119679618_119680831
transcript_55622.known	chr2	+	11090	27	FSM	ENSG00000088179.9	ENST00000263708.7	11090	27	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	29.9858201202506	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAAGTTTTGAAGATT	17	True	NA	9	True	AATAAA	-22	NA	119759921	119984899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
transcript_55626.known	chr2	+	1777	17	FSM	ENSG00000115109.14	ENST00000331393.8	1777	17	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_16	38.6603802361022	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAAGGAATCAAGGAAG	3	True	NA	NA	False	NA	NA	NA	120013118	120104399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120104059
transcript_55631.nic	chr2	+	1936	2	ISM	ENSG00000115109.14	ENST00000331393.8	1777	17	-91	83570	-49	-53571	5prime_fragment	FALSE	canonical	3	305	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTTTAAAAACGCAGT	NA	False	NA	NA	False	NA	NA	NA	120013027	120020829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_120013211_120019076
transcript_55632.known	chr2	+	767	6	FSM	ENSG00000144118.14	ENST00000431732.5	767	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	169.625941412273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAGAGAAATCAGAACAAA	-11	True	NA	NA	False	NA	NA	NA	120252849	120293155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_120252981_120278617_120278779_120280834_120280908_120285873_120286083_120289579_120289758_120293140
transcript_55634.known	chr2	+	1931	5	FSM	ENSG00000144118.14	ENST00000470417.1	1931	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	149.673812004639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	14	True	NA	-1	True	AAAACA	-30	NA	120252874	120294676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_120252981_120278617_120278713_120286066_120286083_120289579_120289758_120293140
transcript_55635.known	chr2	+	2247	5	FSM	ENSG00000144118.14	ENST00000272519.10	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	68.3241355598444	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	-9	True	NA	33	True	AATAAA	-17	NA	120252851	120294710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_120252981_120278617_120278779_120285873_120286083_120289579_120289758_120293140
transcript_55637.nnic	chr2	+	2095	4	NIC	ENSG00000144118.14	novel	2247	5	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	172.248528456865	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	-18	True	NA	33	True	AATAAA	-17	NA	120252842	120294710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_120252981_120285873_120286083_120289579_120289758_120293140
transcript_55641.known	chr2	-	1686	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_3	70.0541457255267	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGCTTGTGCCTGTA	-2	True	NA	1	True	ATTAAA	-16	NA	121736875	121726944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
transcript_55652.known	chr2	+	1416	4	FSM	ENSG00000236859.8	ENST00000419902.3	1416	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.73053390247253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	-18	True	NA	12	True	AATAAA	-18	NA	121650081	121728563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121650382_121650467_121650683_121705767_121705908_121727802
transcript_55653.known	chr2	+	1232	4	FSM	ENSG00000236859.8	ENST00000662168.1	1232	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.48528137423857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	-25	True	NA	12	True	AATAAA	-18	NA	121649620	121728563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121649737_121650467_121650683_121705767_121705908_121727802
transcript_55658.known	chr2	+	1368	2	FSM	ENSG00000236859.8	ENST00000447668.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	-18	True	NA	10	True	ACTAAA	-19	NA	121650081	121651535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121650382_121650467
transcript_55661.known	chr2	+	1182	2	FSM	ENSG00000236859.8	ENST00000413904.6	1182	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	152	False	NA	10	True	ACTAAA	-19	NA	121649797	121651535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121649912_121650467
transcript_55662.known	chr2	+	3302	6	FSM	ENSG00000211460.12	ENST00000389682.8	3302	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	421.778899424805	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	-24	True	NA	18	True	ATTAAA	-29	NA	121755650	121767853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_55665.known	chr2	+	2717	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	513.253543582507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCTTGGAATTCCA	-12	True	NA	3	True	ATTAAA	-13	NA	121755662	121767179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_55667.known	chr2	+	2843	6	FSM	ENSG00000211460.12	ENST00000467324.5	2843	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	417.411355858942	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGCTGCTGTAAGAA	-16	True	NA	22	True	AATAAA	-23	NA	121755658	121767294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755954_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_55669.known	chr2	+	3328	5	FSM	ENSG00000211460.12	ENST00000536142.5	3328	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.690837665344	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	NA	False	NA	18	True	ATTAAA	-29	NA	121755544	121767853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121765133
transcript_5567.known	chr1	-	1937	12	FSM	ENSG00000121940.17	ENST00000674849.1	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	52.2130093665117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCCAATATGTCATTAA	35	True	NA	-57	True	NA	NA	NA	108963425	108932336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963360
transcript_55671.known	chr2	+	605	5	FSM	ENSG00000211460.12	ENST00000495112.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	456.917593773757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTAGAGGAAGTG	10	True	NA	NA	False	NA	NA	NA	121755684	121765284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_55676.known	chr2	+	1118	3	FSM	ENSG00000211460.12	ENST00000498545.5	1118	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	569.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTATTAAGGGATTTA	-15	True	NA	26	True	ATTAAA	-36	NA	121755659	121765985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_121755846_121763004_121763085_121765133
transcript_55678.known	chr2	+	1018	4	FSM	ENSG00000136732.16	ENST00000259254.9	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2289111041209	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCGAGTCCAACAGTA	2	True	NA	14	True	AATAAA	-17	NA	126656157	126696667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_126656313_126690254_126690312_126693863_126693948_126695945
transcript_55679.known	chr2	+	932	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	97.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTCCGAGTCCAACA	-11	True	NA	11	True	AATAAA	-14	NA	126656183	126696664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_126656313_126693863_126693948_126695945
transcript_55680.known	chr2	+	1341	2	FSM	ENSG00000136732.16	ENST00000484700.2	1341	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTCATCTTGTTTTT	-23	True	NA	NA	False	AATAAA	-16	NA	126656132	126658767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_126656313_126657606
transcript_55681.known	chr2	-	1472	1	FSM	ENSG00000260634.1	ENST00000567613.1	1472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTACTGAATGCCATTTA	5450	False	NA	NA	False	AATAAA	-19	NA	127025723	127024251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127024300_127025700
transcript_55684.known	chr2	-	2345	15	FSM	ENSG00000163161.14	ENST00000644317.1	2345	15	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_13	92.9452329413973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGATGCATCAAGGGC	6	True	NA	NA	False	NA	NA	NA	127294098	127257474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292705_127293512_127293719_127294053
transcript_55685.known	chr2	-	2718	15	FSM	ENSG00000163161.14	ENST00000285398.7	2718	15	0	0	0	0	multi-exon	FALSE	canonical	1	106	junction_12	61.7180885071758	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	8	True	NA	-9	True	AATAAA	-23	NA	127294144	127257289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_55686.nic	chr2	-	2753	15	NIC	ENSG00000163161.14	novel	2787	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	12	junction_10	94.0211656587852	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCTTCATTGTACAAG	-15	True	NA	-15	True	AATAAA	-17	NA	127294167	127257295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289520_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_5569.known	chr1	-	4803	12	FSM	ENSG00000121940.17	ENST00000356970.6	4803	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	26.4656334151691	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATAAAATTTTTCC	3	True	NA	NA	False	AAGAAA	-16	NA	108963457	108929507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963360
transcript_55692.nic	chr2	-	619	2	ISM	ENSG00000163161.14	ENST00000490062.1	576	3	-14	779	-1	-779	5prime_fragment	FALSE	canonical	3	309	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGTTTCCTCAAATAA	-15	True	NA	0	True	AATAAA	-18	NA	127294167	127293213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_127293719_127294053
transcript_55693.known	chr2	+	489	3	FSM	ENSG00000236682.3	ENST00000692842.1	559	3	64	6	0	0	multi-exon	FALSE	canonical	3	63	junction_1	15	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATAAATTTTTTCC	9	True	NA	14	True	AATAAA	-23	NA	127388241	127389411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_127388312_127388880_127388999_127389110
transcript_55694.known	chr2	+	615	3	FSM	ENSG00000236682.3	ENST00000654207.2	620	3	0	5	0	-1	multi-exon	FALSE	canonical	2	3	junction_1	45	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATCTAGAGATAAATTT	235	False	NA	9	True	AATAAA	-18	NA	127388183	127389406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_127388385_127388880_127388999_127389110
transcript_55695.known	chr2	+	779	2	FSM	ENSG00000115718.18	ENST00000402125.2	779	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGCCTGCTGTTCTGTC	4	True	NA	NA	False	ATTAAA	-18	NA	127423288	127429015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_127423409_127428356
transcript_55700.known	chr2	-	2973	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_10	46.0244339531738	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-10	True	NA	-19	True	AATAAA	-15	NA	127526489	127480811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
transcript_55701.nic	chr2	-	2853	14	NIC	ENSG00000163166.15	novel	2973	14	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_13	132.062832454769	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	NA	False	NA	-19	True	AATAAA	-15	NA	127526830	127480811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526635
transcript_55706.nic	chr2	-	1875	7	NIC	ENSG00000163166.15	novel	2973	14	NA	NA	-13	4427	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	221.350212709784	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAAAACAGTAAGTTT	-23	True	NA	NA	False	CATAAA	-1	NA	127526502	127498151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127506691_127506720_127523675_127523792_127526174
transcript_5571.known	chr1	-	1896	12	FSM	ENSG00000121940.17	ENST00000675956.1	1896	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	44.0791924450933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGACTAGCCAATAT	33	True	NA	-65	True	NA	NA	NA	108963427	108932344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963400
transcript_55712.known	chr2	-	608	4	FSM	ENSG00000163166.15	ENST00000436740.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	231.459619708397	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCGACTCTGAGAGTGA	-6	True	NA	NA	False	NA	NA	NA	127526440	127505554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127505753_127506691_127506720_127523675_127523792_127526174
transcript_55713.known	chr2	-	1080	3	FSM	ENSG00000163166.15	ENST00000409725.1	1080	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGGAAAATGAGGAGCTAC	NA	False	NA	NA	False	NA	NA	NA	127526886	127505039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127505753_127523675_127523792_127526635
transcript_55714.known	chr2	-	870	2	FSM	ENSG00000163166.15	ENST00000486662.1	870	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGAGCTTCCCAAA	-3	True	NA	NA	False	NA	NA	NA	127526482	127505190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127505753_127526174
transcript_55715.known	chr2	-	2387	10	FSM	ENSG00000072163.20	ENST00000355119.9	2387	10	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_9	6.03692342542494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-6	True	NA	-5	True	AATGAA	-16	NA	127675530	127638425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127675013
transcript_55716.nic	chr2	-	1396	3	ISM	ENSG00000072163.20	ENST00000426981.5	1409	5	1545	45	-183	0	3prime_fragment	FALSE	canonical	3	26	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-1	True	NA	-5	True	AATGAA	-16	NA	127640586	127638425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_127639429_127640069_127640146_127640269
transcript_55717.known	chr2	-	1137	2	FSM	ENSG00000072163.20	ENST00000494613.5	1137	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	13	True	NA	-5	True	AATGAA	-16	NA	127640403	127638425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127639429_127640269
transcript_55718.known	chr2	-	9490	22	FSM	ENSG00000136709.12	ENST00000322313.9	9490	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_9	62.1740297658457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACCTGTGTAACTCA	0	True	NA	-5	True	AATAAA	-19	NA	127811171	127701026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_55720.nic	chr2	-	1795	15	ISM	ENSG00000136709.12	ENST00000322313.9	9490	22	-16	20884	0	4741	5prime_fragment	FALSE	canonical	3	184	junction_2	69.9148534625789	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAAAAAAACACAAGC	-16	True	NA	NA	False	ATTAAA	-7	NA	127811187	127721910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_55727.known	chr2	-	3104	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	15.239422561239	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATTAATAAACCTCT	0	True	NA	-45	True	NA	NA	NA	127811171	127762532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_55732.known	chr2	-	5038	4	FSM	ENSG00000144231.11	ENST00000272645.9	5038	4	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_3	38.5774833578115	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGTCAGATAATTTT	-20	True	NA	NA	False	AATAAA	-16	NA	127858155	127843552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127858027
transcript_55735.nnic	chr2	-	2119	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	-11	433	combination_of_known_splicesites	FALSE	canonical	3	125	junction_2	341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTTTTGA	5	True	NA	-11	True	AATAAA	-16	NA	127858130	127846265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127848186_127850589_127850686_127858027
transcript_55736.known	chr2	-	1758	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	300.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	18	True	NA	-40	True	AAGAAA	-5	NA	127858117	127846698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127848186_127852924_127853106_127858027
transcript_55737.nnic	chr2	-	1726	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	-11	40	combination_of_known_splicesites	FALSE	canonical	3	125	junction_2	341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTACTTC	5	True	NA	0	True	AATAAA	-23	NA	127858130	127846658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_127848186_127850589_127850686_127858027
transcript_55739.known	chr2	-	1037	2	FSM	ENSG00000144231.11	ENST00000487079.1	1037	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCATAGCCCCTTGA	16	True	NA	NA	False	NA	NA	NA	127858119	127847240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127848186_127858027
transcript_5574.nnic	chr1	-	1996	12	FSM	ENSG00000121940.17	ENST00000692511.1	8384	12	0	6388	0	0	multi-exon	FALSE	canonical	0	0	junction_11	44.0791924450933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTATATTGTGAAGCTT	-24	True	NA	-32	True	ATTAAA	-5	NA	108963484	108932311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963380
transcript_55740.known	chr2	-	4803	9	FSM	ENSG00000144233.11	ENST00000681313.1	4803	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.7054313170472	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAAAATCGTTTTGTTC	5	True	NA	-24	True	AATAAA	-8	NA	127885945	127861638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127865206_127866899_127866997_127867144_127867280_127869453_127869541_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
transcript_55743.known	chr2	-	4084	21	FSM	ENSG00000136715.19	ENST00000643581.2	4084	21	0	0	0	0	multi-exon	FALSE	canonical	2	142	junction_15	27.5642431421579	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCAGTTTGCATCTTT	-4	True	NA	-7	True	AATAAA	-22	NA	128028059	127941221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
transcript_55744.known	chr2	+	10761	41	FSM	ENSG00000136731.13	ENST00000259253.11	10761	41	0	0	0	0	multi-exon	FALSE	canonical	2	67	junction_22	19.1479600741176	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	-5	True	NA	39	True	AGTAAA	-22	NA	128091199	128195677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_128091416_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
transcript_55745.nnic	chr2	-	1899	4	NNC	ENSG00000229536.3	novel	1743	3	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.63299316185545	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGCTCATTACTAGGG	NA	False	NA	NA	False	AATAAA	-28	NA	129877607	129868134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_129869536_129872605_129872752_129873192_129873271_129877333
transcript_55746.known	chr2	-	563	2	FSM	ENSG00000229536.3	ENST00000450531.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCAGCCAGGTCTTAGAA	NA	False	NA	NA	False	NA	NA	NA	129877553	129869192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_129869536_129877333
transcript_55747.known	chr2	-	3661	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	0	0	0	multi-exon	TRUE	canonical	3	595	junction_10	76.6949223293896	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	-7	True	NA	NA	False	AATAAA	-18	NA	130181601	130151407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_5575.nnic	chr1	-	2048	12	FSM	ENSG00000121940.17	ENST00000692342.1	8398	12	-38	6388	0	0	multi-exon	FALSE	canonical	3	17	junction_11	39.4218549110528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTATATTGTGAAGCTT	-28	True	NA	-32	True	ATTAAA	-5	NA	108963488	108932311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963342
transcript_55750.known	chr2	+	455	3	FSM	ENSG00000152082.15	ENST00000425361.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	983	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	53	False	NA	27	True	AATAAA	-16	NA	130181736	130190713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130181798_130182626_130182776_130190468
transcript_55751.known	chr2	+	435	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTGAGATGCAGA	88	False	NA	9	True	NA	NA	NA	130181771	130190695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130181831_130182626_130182776_130190468
transcript_55752.known	chr2	+	599	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_2	1	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	-3	True	NA	41	True	AATAAA	-30	NA	130182261	130190727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130182453_130182626_130182776_130190468
transcript_55753.known	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	290	False	NA	41	True	AATAAA	-30	NA	130182554	130190727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130182776_130190468
transcript_55755.known	chr2	-	1847	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	141.203965949969	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	339	False	NA	-2	True	AGTAAA	-21	NA	130342349	130338242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_55756.known	chr2	-	2063	6	FSM	ENSG00000136710.10	ENST00000651709.1	2063	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	143.65737015552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACCACTACCCAACTT	-11	True	NA	-17	True	AGTAAA	-6	NA	130342699	130338257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_55761.known	chr2	-	1769	5	FSM	ENSG00000136710.10	ENST00000259229.7	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	16.4069345095298	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTGAACTTTAACATAA	-12	True	NA	NA	False	AATACA	-20	NA	130342164	130337932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_55763.known	chr2	-	1247	5	FSM	ENSG00000136710.10	ENST00000409127.1	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	122.589763031013	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTCTGTTCTGGGA	364	False	NA	NA	False	NA	NA	NA	130342324	130338495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_5577.nic	chr1	-	2010	12	FSM	ENSG00000121940.17	ENST00000688778.1	8377	12	-21	6388	0	0	multi-exon	FALSE	canonical	0	0	junction_11	44.0791924450933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTATATTGTGAAGCTT	-28	True	NA	-32	True	ATTAAA	-5	NA	108963488	108932311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963380
transcript_55770.known	chr2	-	3562	2	FSM	ENSG00000136710.10	ENST00000465315.1	3562	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAACTTTTGTGTTTTTT	17	True	NA	-6	True	AGTAAA	-17	NA	130342135	130338246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130339233_130339559
transcript_55774.known	chr2	+	822	9	FSM	ENSG00000136718.10	ENST00000409649.5	822	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	223.63027523124	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTCTGGGCACGCTGGAG	19	True	NA	NA	False	GGGGCT	-30	NA	130342909	130346364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130342963_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_55777.known	chr2	+	924	9	FSM	ENSG00000136718.10	ENST00000428740.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	314.571037287287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACTCACCACTCAGTC	33	True	NA	NA	False	NA	NA	NA	130342923	130346467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130342963_130343085_130343195_130344628_130344726_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_55780.known	chr2	+	2379	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.9443875198524	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	31	True	NA	30	True	AATAAA	-19	NA	130342921	130347810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_55781.nic	chr2	+	1055	3	ISM	ENSG00000072135.13	ENST00000409022.2	993	9	2606	-537	87	-2	3prime_fragment	FALSE	canonical	3	12	junction_2	27.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGAGGTCTGTTTTTC	-31	True	NA	15	True	AATAAA	-15	NA	130372694	130375403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_130372948_130373156_130373221_130374665
transcript_55783.known	chr2	-	603	6	FSM	ENSG00000178162.8	ENST00000433703.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	28.1595454508769	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTAGTCTCAAAGG	NA	False	NA	NA	False	AATAGA	-14	NA	130427775	130418233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_55784.nic	chr2	-	1529	6	NIC	ENSG00000178162.8	novel	564	6	NA	NA	-404	0	intron_retention	FALSE	canonical	2	6	junction_1	47.9140897857822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTGAGTGGTCGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	130428580	130416755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_130416942_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_55785.nic	chr2	-	2837	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-11	5	intron_retention	FALSE	canonical	3	75	junction_3	30.9626791476448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130427753	130416749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_55786.known	chr2	-	555	5	FSM	ENSG00000178162.8	ENST00000423905.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	48.859492424707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTTAGAGATGAATGAA	NA	False	NA	NA	False	NA	NA	NA	130427742	130418150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130427703
transcript_55787.nnic	chr2	-	2762	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-404	0	intron_retention	FALSE	canonical	3	29	junction_3	44.9075439096818	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130428580	130416754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_130418299_130419070_130419246_130425090_130425159_130426165_130426264_130427703
transcript_55789.nnic	chr2	-	2473	4	NNC	ENSG00000178162.8	novel	2070	4	NA	NA	-437	5	intron_retention	FALSE	non_canonical	0	0	junction_1	64.380811496042	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130428613	130416749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_130417483_130418483_130419246_130425090_130425159_130427703
transcript_55791.known	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	40.7130882586369	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
transcript_55793.nic	chr2	-	3385	3	NIC	ENSG00000178162.8	novel	2070	4	NA	NA	-348	5	intron_retention	FALSE	canonical	3	58	junction_2	49	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130428524	130416749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_130419246_130425090_130425159_130427703
transcript_55794.nnic	chr2	+	2838	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-308	288	intron_retention	FALSE	canonical	3	27	junction_1	8.27042925125413	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130692973	130704749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130703200
transcript_55799.known	chr2	+	4349	9	FSM	ENSG00000115762.17	ENST00000403716.5	4349	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	255.514401502146	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	61	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131144407_131144450_131146636
transcript_55807.known	chr2	+	4208	8	FSM	ENSG00000115762.17	ENST00000234115.10	4208	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	188.526401550639	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGACTTCTGTTGTCTTT	158	False	NA	25	True	ATTAAA	-25	NA	131104943	131149852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140169_131140276_131146636
transcript_55810.known	chr2	+	2277	8	FSM	ENSG00000115762.17	ENST00000409158.5	2277	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	199.985305582634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	61	False	NA	NA	False	NA	NA	NA	131104846	131147797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140166_131140276_131146636
transcript_55816.known	chr2	+	4177	6	FSM	ENSG00000115762.17	ENST00000439822.6	4177	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	260.878822444444	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	61	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131140166_131140276_131146636
transcript_55818.known	chr2	+	644	4	FSM	ENSG00000115762.17	ENST00000482225.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_3	12.657891697365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCATAGTTGAAATAAAAT	-11	True	NA	NA	False	NA	NA	NA	131105328	131127059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683
transcript_55820.known	chr2	-	3677	1	FSM	ENSG00000233087.8	ENST00000623617.3	3677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGTTTGAGATAAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	131364168	131360491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_131360500_131364200
transcript_55821.known	chr2	+	1520	5	FSM	ENSG00000075886.11	ENST00000321253.7	1520	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTGTGTCGTGCAG	11	True	NA	NA	False	ATTAAA	-19	NA	131476118	131482934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131476203_131478163_131478387_131479307_131479457_131480068_131480750_131482551
transcript_55822.known	chr2	-	980	4	FSM	ENSG00000173272.16	ENST00000445782.2	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	698.154392348537	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGAGGAAGCTATTTA	7	True	NA	-86	True	NA	NA	NA	131492387	131469808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_131470344_131472067_131472183_131491875_131492025_131492206
transcript_55827.nic	chr2	-	966	3	ISM	ENSG00000173272.16	ENST00000445782.2	980	4	280	-84	-136	84	3prime_fragment	FALSE	canonical	3	28	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGCATTATGTAAATTA	287	False	NA	-2	True	AATAAA	-17	NA	131492107	131469724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_131470344_131472067_131472183_131491875
transcript_55828.nnic	chr2	-	495	3	NIC	ENSG00000173272.16	novel	599	3	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	49	False	NA	-19	True	AATAAA	-30	NA	131492345	131483959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_131484219_131491875_131491973_131492206
transcript_55829.known	chr2	-	599	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	16	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-3	True	NA	-19	True	AATAAA	-30	NA	131492397	131483959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_131484219_131491875_131492025_131492206
transcript_55830.nnic	chr2	-	672	3	NIC	ENSG00000173272.16	novel	599	3	NA	NA	-240	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	730	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	NA	False	NA	-19	True	AATAAA	-30	NA	131492983	131483959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_131484219_131491875_131492025_131492719
transcript_55832.known	chr2	-	382	3	FSM	ENSG00000173272.16	ENST00000410036.2	382	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	737.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCTACTGTTTTTTTT	NA	False	NA	-17	True	AATAAA	-32	NA	131492743	131483957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_131484219_131491875_131491973_131492719
transcript_55837.known	chr2	+	1290	8	FSM	ENSG00000163040.15	ENST00000409856.8	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	36.8421896577214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-9	True	NA	NA	False	AATAAA	-17	NA	131527887	131533666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_55839.known	chr2	+	1543	8	FSM	ENSG00000163040.15	ENST00000295171.10	1543	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	45.2002347835694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	9655	False	NA	NA	False	AATAAA	-17	NA	131527832	131533666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_55840.known	chr2	+	2005	10	FSM	ENSG00000287151.1	ENST00000657415.1	2005	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	13.242281702613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTCTTTCACTCCCT	NA	False	NA	NA	False	AATAAA	-21	NA	131682474	131767404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416_131722649_131733832_131733953_131750632_131750831_131751508_131751586_131766618
transcript_55842.nic	chr2	+	977	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-22	44625	-22	-266	5prime_fragment	FALSE	canonical	3	6	junction_1	10.2176318195558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTTTTATATTAATG	NA	False	NA	NA	False	AATAAA	-17	NA	131682452	131722779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_55843.nic	chr2	+	1146	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-22	44456	-22	-97	5prime_fragment	FALSE	canonical	3	6	junction_1	10.2176318195558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTCAGCTTTTACATA	NA	False	NA	NA	False	AATAAA	-21	NA	131682452	131722948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_55847.nnic	chr2	+	1539	6	NNC	ENSG00000287151.1	novel	2005	10	NA	NA	0	-97	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	7.24982758415674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTCAGCTTTTACATA	-20	True	NA	NA	False	AATAAA	-21	NA	131682490	131722948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_131682989_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_55850.known	chr2	+	2119	6	FSM	ENSG00000287151.1	ENST00000666411.1	2119	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	12.4995999935998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTTTCACAAAGAAAAAAA	-30	True	NA	NA	False	AATGAA	-4	NA	131682480	131698401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131696868
transcript_55852.known	chr2	-	1682	1	FSM	ENSG00000272769.1	ENST00000608279.1	1682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATTCTTCACGCCGC	NA	False	NA	NA	False	AATAAA	-19	NA	132347297	132345615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_132345600_132347300
transcript_55855.known	chr2	-	3510	4	FSM	ENSG00000224043.8	ENST00000428857.2	3510	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.34209919681348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAGCATAGCCATAT	750	False	NA	NA	False	AATATA	-37	NA	134918710	134864599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_134867740_134868943_134869042_134877519_134877644_134918562
transcript_55856.known	chr2	-	1150	3	FSM	ENSG00000224043.8	ENST00000668300.1	1150	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAAAAACTAGCCACCT	750	False	NA	NA	False	NA	NA	NA	134918710	134804100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_134804744_134810920_134811280_134918562
transcript_55857.known	chr2	-	636	3	FSM	ENSG00000224043.8	ENST00000413962.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAACAAGCGTCAGGAA	-11	True	NA	NA	False	AATATA	-7	NA	134918678	134867317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_134867740_134868943_134869042_134918562
transcript_55860.known	chr2	+	6920	9	FSM	ENSG00000082258.13	ENST00000264157.10	6920	9	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_7	43.5545634807651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCTCTAACATGTCT	-17	True	NA	NA	False	AATAAA	-21	NA	134918821	134959342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229
transcript_55867.known	chr2	+	606	5	FSM	ENSG00000082258.13	ENST00000475094.1	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	9.13783344124853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCATTAAAATTAGGGAG	-2	True	NA	NA	False	NA	NA	NA	134918836	134942769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611
transcript_55868.known	chr2	+	4491	10	FSM	ENSG00000082258.13	ENST00000295238.10	4491	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	77.4622169946639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATTGTGTGAGCTATTC	-14	True	NA	10	True	ATTAAA	-23	NA	134918824	134957017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229_134954380_134954480
transcript_55869.nic	chr2	+	3201	26	NIC	ENSG00000115839.19	novel	5136	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	53.4732232056382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATACATATC	-4	True	NA	NA	False	AATAGA	-29	NA	135052285	135169977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135167692_135167714_135168544_135168750_135169733
transcript_55870.known	chr2	+	4185	25	FSM	ENSG00000115839.19	ENST00000442034.5	4185	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	47.2475014036604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATCTATATATAATAT	8	True	NA	NA	False	AATAGA	-41	NA	135052297	135169989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135167692_135167714_135168544
transcript_55874.known	chr2	+	4891	24	FSM	ENSG00000115839.19	ENST00000264158.13	4891	24	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	19.8799801455135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTAGGAGTTTCTTCA	2	True	NA	NA	False	AATAAA	-18	NA	135052291	135170710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135168544
transcript_5588.known	chr1	+	3284	8	FSM	ENSG00000121957.15	ENST00000675829.1	3284	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	13.9122615130741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATAAAATATTCTAAGAA	671	False	NA	NA	False	AATAAA	-19	NA	108876959	108903759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789
transcript_55882.known	chr2	+	1139	3	FSM	ENSG00000115839.19	ENST00000425393.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTATTTGTATCAATA	9	True	NA	NA	False	NA	NA	NA	135052298	135059066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135052326_135052429_135052486_135058010
transcript_55885.known	chr2	-	6712	21	FSM	ENSG00000121988.18	ENST00000264159.11	6712	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	12.5078975051765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCTCTGCCCTAGCA	-21	True	NA	1	True	ATTAAA	-22	NA	135531218	135196968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_55889.nic	chr2	-	1112	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	16.2138486760204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	50	False	NA	-18	True	AATAAA	-9	NA	135531228	135345135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_5589.known	chr1	+	555	1	FSM	ENSG00000244716.3	ENST00000414070.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	9561	False	NA	NA	False	AAGAAA	-34	NA	108992281	108992836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_108992300_108992800
transcript_55894.known	chr2	+	4272	23	FSM	ENSG00000048991.17	ENST00000409478.5	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_13	44.9216259649942	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	13	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
transcript_55897.nic	chr2	+	1154	9	ISM	ENSG00000048991.17	ENST00000409478.5	4272	23	-52	89134	-6	-51	5prime_fragment	FALSE	canonical	3	198	junction_3	38.4770629726334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAAGAAGAGTACCA	NA	False	NA	24	True	NA	NA	NA	135531448	135636132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087
transcript_55899.nnic	chr2	+	3380	14	NNC	ENSG00000144224.17	novel	3771	13	NA	NA	-108	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	153.840269118222	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGCATCTTGCTTTTT	-8	True	NA	14	True	AATAAA	-21	NA	135741625	135785061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748_135782884_135783508
transcript_55901.nnic	chr2	+	3389	14	NNC	ENSG00000144224.17	novel	3771	13	NA	NA	-108	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	152.86018672758	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACCTTGCATCTTGCTT	-8	True	NA	11	True	AATAAA	-18	NA	135741625	135785058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748_135782896_135783508
transcript_55903.known	chr2	+	3771	13	FSM	ENSG00000144224.17	ENST00000272638.14	3771	13	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	62.7386554596836	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACCTTGCATCTTGC	-6	True	NA	9	True	AATAAA	-16	NA	135741854	135785056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
transcript_55909.nic	chr2	+	995	8	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-229	14452	-108	8693	5prime_fragment	FALSE	canonical	3	434	junction_7	57.8562610162073	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAAAAGAAATGTTGGAT	-8	True	NA	32	True	NA	NA	NA	135741625	135770604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570
transcript_55910.nic	chr2	+	2171	8	NIC	ENSG00000144224.17	novel	3771	13	NA	NA	20	-7168	intron_retention	FALSE	canonical	3	434	junction_6	71.6408274886974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGGGCCCAATAAAT	32	True	NA	NA	False	NA	NA	NA	135741805	135773053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_135742012_135748266_135748370_135753538_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419
transcript_55912.nic	chr2	+	791	7	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-76	15250	-7	7895	5prime_fragment	FALSE	canonical	3	478	junction_3	45.6779183219006	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGGAAGAACAGGTA	5	True	NA	-8	True	AATACA	-40	NA	135741778	135769806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768
transcript_55917.nic	chr2	+	906	6	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-229	23145	-108	0	5prime_fragment	FALSE	canonical	3	478	junction_3	49.5766073869522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	-8	True	NA	20	True	NA	NA	NA	135741625	135761911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817
transcript_55918.nic	chr2	+	1395	6	NIC	ENSG00000144224.17	novel	3771	13	NA	NA	-20	7895	intron_retention	FALSE	canonical	3	516	junction_3	36.9680943517515	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGGAAGAACAGGTA	-8	True	NA	-8	True	AATACA	-40	NA	135741765	135769806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_135742012_135748266_135748370_135753538_135754278_135755516_135755692_135761817_135761912_135769768
transcript_55919.known	chr2	+	1255	5	FSM	ENSG00000144224.17	ENST00000416538.5	1255	5	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	38.3438391400757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	7	True	NA	20	True	NA	NA	NA	135741867	135761911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_135742012_135748266_135748370_135753538_135754278_135755516_135755692_135761817
transcript_55920.known	chr2	-	3753	17	FSM	ENSG00000076003.5	ENST00000264156.3	3753	17	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_13	109.26859109552	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATACTCAAGTAGAT	19	False	135876462	-12	True	AATAAA	-20	NA	135876443	135839625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_5593.nnic	chr1	-	1825	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.6913429510899	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-30	True	NA	-4	True	AATAAA	-32	NA	109076009	109062485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109063492_109064140_109064694_109066134_109066233_109074986_109075066_109075920
transcript_55937.known	chr2	-	3099	16	FSM	ENSG00000115866.11	ENST00000264161.9	3099	16	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_8	63.7311715114529	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTAATCTTTTTTA	-6	True	NA	-1	True	AATAAA	-16	NA	135985626	135905880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_135907408_135911138_135911211_135911381_135911494_135912485_135912567_135914468_135914512_135916225_135916373_135920452_135920601_135922783_135922919_135924386_135924499_135932782_135932843_135933909_135933991_135943377_135943481_135961395_135961499_135979273_135979367_135983396_135983455_135985402
transcript_5595.nnic	chr1	-	1830	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.6913429510899	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-30	True	NA	-4	True	AATAAA	-32	NA	109076009	109062485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109063497_109064140_109064694_109066134_109066233_109074986_109075066_109075920
transcript_55962.known	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	0	1141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-1	True	NA	-3	True	AATAAA	-18	NA	136118149	136114348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_136115913_136118045
transcript_55964.known	chr2	+	3132	6	FSM	ENSG00000150540.14	ENST00000280097.5	3132	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	3.00665927567458	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCTTTCAGACAC	0	True	NA	NA	False	AATAAA	-32	NA	137964472	138016364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_137964629_137970164_137970218_138000917_138001026_138002063_138002195_138005131_138005226_138013774
transcript_55965.known	chr2	+	504	2	FSM	ENSG00000150540.14	ENST00000280096.5	504	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGCATGTGGAATAAC	0	True	NA	NA	False	AATAAA	-24	NA	137964472	137967444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_137964629_137967096
transcript_55966.known	chr2	+	6056	11	FSM	ENSG00000144228.9	ENST00000280098.9	6056	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	6.78527818147495	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCATTTGATGCTATC	-17	True	NA	NA	False	NA	NA	NA	138501769	138573547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_138502120_138550156_138550295_138550482_138550605_138550902_138551055_138552553_138552682_138559021_138559200_138559281_138559338_138560804_138560928_138564707_138564851_138564939_138564994_138568935
transcript_55969.known	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	6	True	NA	2	True	AATAAA	-28	NA	138780390	138669156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_138671666_138780190
transcript_5597.known	chr1	-	814	4	FSM	ENSG00000197780.11	ENST00000338366.6	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCAGGCTGGAGTGCA	-24	True	NA	NA	False	NA	NA	NA	109076003	109064139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109064694_109066134_109066233_109074986_109075066_109075920
transcript_55970.nnic	chr2	+	680	3	NNC	ENSG00000115919.15	novel	1576	15	NA	NA	112315	139	at_least_one_novel_splicesite	TRUE	canonical	3	38	junction_1	6.5	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATATAATTTTTCAGAG	NA	False	NA	16	True	AATAAA	-20	NA	143039973	143042311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_143040158_143040427_143040659_143042046
transcript_55973.known	chr2	-	10585	12	FSM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	24.7362951454065	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTATGTGTGTGTGT	-15	True	NA	NA	False	AATAAA	-29	NA	144332512	143938067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_55978.known	chr2	-	1563	10	FSM	ENSG00000121964.15	ENST00000463875.6	1563	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	31.9304800395415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATGATGGTTACACATG	-19	True	NA	NA	False	ATTAAA	-17	NA	144332516	143946826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144235675_144235738_144332438
transcript_5598.known	chr1	+	2769	3	FSM	ENSG00000215717.7	ENST00000338272.9	2769	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	15.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCAATTTATTTGT	0	True	NA	16	True	AATAAA	-17	NA	109090763	109096934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109090883_109092889_109093022_109094416
transcript_55981.nic	chr2	-	2547	7	ISM	ENSG00000121964.15	ENST00000682281.1	10585	12	-17	67683	5	0	5prime_fragment	FALSE	canonical	3	81	junction_1	13.3260396717604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTGTCTTCCTTTGTA	42	False	NA	NA	False	AATAAA	-23	NA	144332529	144005750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_55983.known	chr2	-	586	5	FSM	ENSG00000121964.15	ENST00000429978.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	47.9296359260114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTTTTCTTCCGGCA	3	True	NA	NA	False	NA	NA	NA	144332568	144178833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_144178961_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_55986.known	chr2	-	2209	10	FSM	ENSG00000121964.15	ENST00000409298.5	2209	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.7519519567295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	5369	False	NA	-7	True	AATAAA	-30	NA	144235737	143946015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
transcript_55987.known	chr2	-	2677	12	FSM	ENSG00000121964.15	ENST00000542155.5	2677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.3052498777818	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	37	True	NA	-7	True	AATAAA	-30	NA	144332534	143946015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211598_144235675_144235738_144332438
transcript_55988.known	chr2	-	2456	6	FSM	ENSG00000121964.15	ENST00000491448.5	2456	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	14.5958898324152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTGTCTTCCTTTGTA	5369	False	NA	NA	False	AATAAA	-23	NA	144235737	144005750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
transcript_55991.known	chr2	+	4131	2	FSM	ENSG00000204406.14	ENST00000478190.3	4131	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCACATTCAATAAAAG	144	False	NA	NA	False	NA	NA	NA	148021237	148028649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_148021685_148024965
transcript_55995.known	chr2	+	324	2	FSM	ENSG00000204406.14	ENST00000470063.5	324	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTAACTATAGCCC	19	True	NA	NA	False	ACTAAA	-2	NA	148021454	148178793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_148021685_148178699
transcript_55999.known	chr2	-	6710	15	FSM	ENSG00000115947.14	ENST00000535373.5	6710	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_14	152.151324378738	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	820	False	148020761	0	True	TATAAA	-17	NA	148020747	147930396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_147981927_147982082_148020632
transcript_56.known	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00162_+_0_500
transcript_560.known	chr1	+	795	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	1699.45454778879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	10	True	NA	29	True	AATAAA	-19	NA	7961700	7985281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
transcript_5600.known	chr1	+	964	2	FSM	ENSG00000215717.7	ENST00000473828.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGACAAAATATAAAC	42	False	NA	NA	False	NA	NA	NA	109090805	109093776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109090883_109092889
transcript_56003.nnic	chr2	-	1596	14	NNC	ENSG00000115947.14	novel	6710	15	NA	NA	-3	1050	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	120.860719878162	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACCATGTGCTTTTTTA	-21	True	NA	-6	True	AATAAA	-19	NA	148020740	147935262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948138_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020632
transcript_56006.nic	chr2	-	1738	14	NIC	ENSG00000115947.14	novel	6598	14	NA	NA	-7	1050	combination_of_known_junctions	FALSE	canonical	3	77	junction_13	106.785467619309	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACCATGTGCTTTTTTA	797	False	NA	-6	True	AATAAA	-19	NA	148020770	147935262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
transcript_56007.known	chr2	-	6547	14	FSM	ENSG00000115947.14	ENST00000392857.10	6547	14	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_7	43.0202924458932	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	-18	True	NA	1	True	TATAAA	-18	NA	148020737	147930395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020632
transcript_56019.known	chr2	-	6472	13	FSM	ENSG00000115947.14	ENST00000540442.5	6472	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	123.115460713375	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-18	True	NA	0	True	TATAAA	-17	NA	148020737	147930396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_148020632
transcript_5602.known	chr1	+	1882	12	FSM	ENSG00000031698.13	ENST00000369923.4	1882	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	387.996677160518	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTTGAACCCCGCCTCT	44	False	NA	-25	True	AATAAA	-45	NA	109213981	109238148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109236804_109236871_109237243_109237374_109237730
transcript_56035.known	chr2	-	6328	11	FSM	ENSG00000115947.14	ENST00000536575.5	6328	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	136.431667878099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	0	True	NA	0	True	TATAAA	-17	NA	148020761	147930396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_148020632
transcript_56043.nic	chr2	+	1107	11	ISM	ENSG00000168280.18	ENST00000676875.1	3315	14	361	20837	361	0	5prime_fragment	FALSE	canonical	3	160	junction_8	16.2098735343617	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATCTGGAGATGGA	-11	True	NA	62	True	AAAAAG	-33	NA	148875587	148962079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970
transcript_56048.nnic	chr2	+	1374	8	NIC	ENSG00000150556.17	novel	1345	7	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	16.9006701956231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	1	True	NA	NA	False	AATAAA	-18	NA	149038740	149215256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_149038802_149077519_149077597_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_56049.known	chr2	+	1345	7	FSM	ENSG00000150556.17	ENST00000409642.8	1345	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	15.7762127549323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	-6	True	NA	NA	False	AATAAA	-24	NA	149038698	149215262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_56051.known	chr2	+	1248	6	FSM	ENSG00000150556.17	ENST00000409876.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.733126291999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	13	False	NA	NA	False	AATAAA	-18	NA	149038717	149215256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_149038802_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_56054.known	chr2	+	4011	5	FSM	ENSG00000187123.15	ENST00000334166.9	4011	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	8.57321409974112	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAAAATGTCAGTTTG	30	True	NA	11	True	AGTAAA	-21	NA	149330586	149474138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_149330723_149437637_149437827_149449048_149449148_149468644_149468776_149470682
transcript_56059.known	chr2	-	1392	8	FSM	ENSG00000168288.13	ENST00000303319.10	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	1023	junction_1	37.4318428232282	1419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGTTTTCATTACA	16	False	149587791	-36	True	AATAAA	-19	NA	149587775	149569636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
transcript_56065.known	chr2	-	2684	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	36.201657420621	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-2	True	NA	-4	True	AATAAA	-25	NA	150487667	150468194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
transcript_56067.known	chr2	-	2777	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	10.7558123821495	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-2	True	NA	-4	True	AATAAA	-25	NA	150487667	150468194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
transcript_56069.known	chr2	-	1229	8	FSM	ENSG00000123609.11	ENST00000243346.10	1229	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	12.969351627304	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGTATTGGTGCCA	8427	False	151289688	-4	True	AATAAA	-15	NA	151289668	151270469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_151270876_151271625_151271733_151275483_151275671_151275757_151275865_151278827_151278991_151281947_151282044_151282867_151282955_151289592
transcript_56070.known	chr2	+	1422	6	FSM	ENSG00000123610.5	ENST00000243347.5	1422	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.96647939483827	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTGCACCTCTCTA	-1	True	NA	15	True	AATAAA	-15	NA	151357591	151380046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_151357761_151363942_151364081_151366055_151366218_151370019_151370249_151373548_151373590_151379363
transcript_56076.nic	chr2	+	4649	30	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	26	11588	7	8924	5prime_fragment	FALSE	canonical	0	0	junction_16	32.0795310737549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACCCTGAGAACATTA	-15	True	NA	NA	False	AATAAA	-6	NA	151409908	151464034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883
transcript_56078.nnic	chr2	+	3071	26	NNC	ENSG00000080345.18	novel	7722	35	NA	NA	-4	4975	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	31.8471348789809	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAAAAAGAAAATATGA	-28	True	NA	NA	False	AAAAAG	-25	NA	151409895	151460085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_56079.known	chr2	+	7722	35	FSM	ENSG00000080345.18	ENST00000428287.6	7722	35	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	54.7530236481595	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGGTGAAACATGTAA	-38	True	NA	-46	True	NA	NA	NA	151409885	151475388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856
transcript_56080.nnic	chr2	+	3152	26	NNC	ENSG00000080345.18	novel	8053	35	NA	NA	7	4975	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_16	27.5593904141583	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAAAAAGAAAATATGA	-15	True	NA	NA	False	AAAAAG	-25	NA	151409908	151460085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_56081.nic	chr2	+	3176	26	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	26	15537	7	4975	5prime_fragment	FALSE	canonical	0	0	junction_16	32.1790988065235	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAAAAAGAAAATATGA	-15	True	NA	NA	False	AAAAAG	-25	NA	151409908	151460085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_56084.nic	chr2	+	2282	16	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	26	33218	7	-12706	5prime_fragment	FALSE	canonical	3	67	junction_1	23.5736199077604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGATGACCTTATGTAA	-15	True	NA	NA	False	TTTAAA	-14	NA	151409908	151442404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904
transcript_56086.known	chr2	+	743	7	FSM	ENSG00000080345.18	ENST00000494333.1	743	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	45.7872495594813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTCTTTTATGTAA	-24	True	NA	NA	False	AAGAAA	-33	NA	151409899	151420379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_56087.nic	chr2	+	1199	7	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	26	54872	7	371	5prime_fragment	FALSE	canonical	3	67	junction_1	31.3550456687419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGTCTGGGCATAT	-15	True	NA	NA	False	NA	NA	NA	151409908	151420750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_56091.known	chr2	-	1076	7	FSM	ENSG00000162980.17	ENST00000458140.6	1076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	292.426438993163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTTTAAGAGCTTT	-7	True	NA	NA	False	NA	NA	NA	151828492	151802981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_151803325_151806820_151806973_151810377_151810562_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_56094.known	chr2	-	5264	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_5	38.2549343222544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGCTTGTCTTAACT	9	True	NA	0	True	AATAAA	-22	NA	151828421	151798796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_56095.known	chr2	-	747	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	233.882363593324	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCTCATTAGTTTT	17	True	NA	NA	False	AAAACA	-23	NA	151828468	151803102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_56107.known	chr2	-	5472	14	FSM	ENSG00000115145.10	ENST00000263904.5	5472	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	5.94053371578702	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTATCTGTAATTT	-15	True	NA	-1	True	AATAAA	-17	NA	152175763	152116800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_56108.nic	chr2	-	758	6	ISM	ENSG00000115145.10	ENST00000463854.5	1364	11	-160	13032	-146	-925	5prime_fragment	FALSE	canonical	3	32	junction_1	7.15541752799933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAGGATGAAGACATAG	87	False	NA	NA	False	NA	NA	NA	152175909	152144913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_5611.known	chr1	+	1914	11	FSM	ENSG00000031698.13	ENST00000234677.7	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	962	junction_5	63.9021908857591	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACTTCTGCTTTTCCT	-20	True	NA	9	True	NA	NA	NA	109213917	109238182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109237243_109237374_109237730
transcript_56144.nic	chr2	-	1886	14	NIC	ENSG00000196504.19	novel	1622	14	NA	NA	-269	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_13	274.716788000784	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAGAAGAA	NA	False	NA	-104	True	TATAAA	-11	NA	152718266	152672564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355_152717626_152717830
transcript_56147.known	chr2	-	1408	13	FSM	ENSG00000196504.19	ENST00000545856.7	1408	13	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_12	224.234670602028	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAGAAGAA	2	True	NA	-104	True	TATAAA	-11	NA	152717457	152672564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229
transcript_56153.known	chr2	+	479	5	FSM	ENSG00000177917.12	ENST00000691702.1	2176	5	917	780	-39	109	multi-exon	FALSE	canonical	3	17	junction_3	366.580397048178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTGTAATAACAAGAAG	300	False	NA	NA	False	NA	NA	NA	152718918	152759882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_152719025_152720532_152720587_152732530_152732581_152734993_152735127_152759746
transcript_56159.known	chr2	+	3242	4	FSM	ENSG00000177917.12	ENST00000326446.10	3242	4	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_2	46.7071253189014	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTTTTGTCATTTGC	1	True	NA	16	True	AATAAA	-28	NA	152718619	152762396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_152719025_152720532_152720587_152734993_152735127_152759746
transcript_56161.known	chr2	+	1308	4	FSM	ENSG00000177917.12	ENST00000686839.1	1308	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	314.859051358258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	237	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_152717996_152720532_152720587_152734993_152735127_152759746
transcript_56169.known	chr2	-	78	1	FSM	ENSG00000226338.1	ENST00000443733.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	153208163	153208085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_153208100_153208200
transcript_56170.nnic	chr2	+	959	3	Antisense	novelGene_ENSG00000177519.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTCTTGCCATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	153477851	153480180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_153478143_153478273_153478363_153479601
transcript_56172.known	chr2	-	1425	1	FSM	ENSG00000177519.4	ENST00000325926.4	1425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGGCCTCCTGGTGG	1	True	NA	-11	True	AATAAA	-19	NA	153478762	153477337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_153477300_153478800
transcript_56174.known	chr2	+	5812	17	FSM	ENSG00000115159.16	ENST00000438166.7	5812	17	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_1	32.7270912242442	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	6	True	NA	13	True	NA	NA	NA	156436378	156586403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_156436514_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
transcript_56179.nnic	chr2	+	2094	2	NNC	ENSG00000287048.1	novel	1624	2	NA	NA	-65827	5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTGTCTTTAAATTA	NA	False	NA	9	True	ATTAAA	-20	NA	156722903	156865706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_156723414_156864122
transcript_56182.known	chr2	-	3332	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	12.4261820363296	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-4	True	NA	-5	True	AATAAA	-17	NA	157876330	157736445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
transcript_56183.known	chr2	-	3130	14	FSM	ENSG00000153237.18	ENST00000283233.10	3130	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	1.85893014978378	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGGGCAATATCTTTA	1380	False	NA	NA	False	AATAAA	-43	NA	158456753	158171072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_158172260_158176520_158176662_158178878_158178997_158220594_158220714_158250771_158250913_158309432_158309640_158313755_158313895_158338725_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158345214_158345319_158358448_158358571_158456414
transcript_56198.nnic	chr2	-	1753	11	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	18.2701943065748	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	143	False	NA	-5	True	AATAAA	-14	NA	159286598	159235797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286535
transcript_56199.known	chr2	-	1811	11	FSM	ENSG00000196151.11	ENST00000359774.9	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	6.70522184569608	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-18	True	NA	-5	True	AATAAA	-14	NA	159286703	159235797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_56205.known	chr2	-	1600	10	FSM	ENSG00000196151.11	ENST00000409124.1	1600	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.9009621094634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTCAGCTATATAGAAAT	16	True	NA	-41	True	TATAAA	-25	NA	159286669	159235833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159236191_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_56214.known	chr2	-	1535	7	FSM	ENSG00000196151.11	ENST00000358147.8	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	21.4916004264198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-18	True	NA	-5	True	AATAAA	-14	NA	159286703	159235797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_56238.nic	chr2	-	2903	16	NNC	ENSG00000123636.19	novel	8145	37	NA	NA	8	-476	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.7869144124704	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTATACATTGGAAGT	47	False	159616608	-1	True	GATAAA	-18	NA	159616561	159404847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_159404902_159404902_159404911_159405021_159405115_159412334_159412546_159427940_159428043_159428310_159428420_159429199_159429261_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448410_159453612_159453802_159478574_159478722_159555822_159555866_159616241
transcript_56246.nic	chr2	-	1004	2	ISM	ENSG00000123636.19	ENST00000483316.1	6838	4	-26	96773	-26	346	5prime_fragment	FALSE	canonical	3	46	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACACACACACACA	27	True	NA	NA	False	AATAGA	-29	NA	159616476	159555096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_159555866_159616241
transcript_56247.known	chr2	+	1494	2	FSM	ENSG00000224152.2	ENST00000686508.1	3051	2	2	1555	2	1	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTCGTTTTAAAGTT	-8	True	NA	11	True	AATAAA	-19	NA	159615295	159617082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_159615454_159615746
transcript_56248.known	chr2	-	2520	3	FSM	ENSG00000226266.7	ENST00000607836.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAAAATT	2	True	NA	NA	False	NA	NA	NA	159712435	159693200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159695421_159710716_159710895_159712313
transcript_56259.nic	chr2	+	3558	10	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	7	-10	combination_of_known_junctions	FALSE	canonical	3	382	junction_1	146.286966416048	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTTGAAATGTTT	197	False	NA	19	True	AATAAA	-16	NA	159712463	159768573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_56261.known	chr2	+	5922	10	FSM	ENSG00000136536.15	ENST00000259050.8	5922	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	167.435633477539	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	-12	True	NA	15	True	AATAAA	-27	NA	159712498	159771027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_56268.nic	chr2	+	723	5	ISM	ENSG00000136536.15	ENST00000259050.8	5922	10	-40	23176	2	-275	5prime_fragment	FALSE	canonical	3	304	junction_1	231.103196646001	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTCAATGAGCACTTT	192	False	NA	NA	False	NA	NA	NA	159712458	159747851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804
transcript_56272.known	chr2	-	1402	2	FSM	ENSG00000054219.11	ENST00000492955.1	1402	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTTAGCCATTTTC	-33	True	NA	NA	False	ACTAAA	-22	NA	159904749	159902364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_159903606_159904588
transcript_56278.known	chr2	-	4286	14	FSM	ENSG00000153250.21	ENST00000348849.8	4286	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_13	94.3653983320521	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	33	True	NA	-11	True	AATAAA	-18	NA	160493807	160272150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_56284.nic	chr2	+	2189	9	NIC	ENSG00000136560.14	novel	2098	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	47.2751255947565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTCCTTTGTTCCT	-3	True	NA	24	True	ATTAAA	-28	NA	161160421	161236187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_161160487_161161284_161161413_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_56286.known	chr2	+	2098	8	FSM	ENSG00000136560.14	ENST00000392749.7	2098	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	23.3019224922909	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGAAGGAATCACATT	3	True	NA	67	True	AGTAAA	-17	NA	161160427	161236230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_56287.nic	chr2	+	2145	8	NIC	ENSG00000136560.14	novel	2155	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	36.0175694088656	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTCCTTTGTTCCT	-5	True	NA	24	True	ATTAAA	-28	NA	161160335	161236187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_56291.nic	chr2	+	760	5	ISM	ENSG00000136560.14	ENST00000406287.5	875	8	68	30402	-10	0	5prime_fragment	FALSE	canonical	3	16	junction_2	64.9706664580255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	-8	True	NA	NA	False	AATAAA	-19	NA	161160416	161204979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_161160487_161161284_161161413_161179613_161179762_161203486_161203596_161204674
transcript_56294.nic	chr2	+	3225	4	ISM	ENSG00000136560.14	ENST00000432692.6	576	7	-130	17187	-1	2474	5prime_fragment	FALSE	canonical	3	89	junction_1	27.7888866675551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTTCAGCTTTCTCTT	-1	True	NA	8	True	AATAAA	-18	NA	161160297	161207453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674
transcript_56295.known	chr2	+	550	4	FSM	ENSG00000136560.14	ENST00000440506.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	53.8537113133554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTACCAAAGGTAGACAT	0	True	NA	NA	False	GATAAA	-25	NA	161160298	161204781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674
transcript_56297.known	chr2	+	674	3	FSM	ENSG00000136560.14	ENST00000461338.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAAGGGTATTGCTTC	3	True	NA	NA	False	AGTAAA	-43	NA	161160343	161163518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161160485_161161284_161161413_161163113
transcript_56298.known	chr2	+	2385	3	FSM	ENSG00000227403.3	ENST00000655684.2	2441	3	10	46	-9	-1	multi-exon	FALSE	canonical	2	5	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCATTCTCTATTCAT	NA	False	NA	10	True	ATTAAA	-15	NA	161244729	161249049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161244896_161245423_161245468_161246874
transcript_56301.known	chr2	+	427	2	FSM	ENSG00000136560.14	ENST00000477952.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATGGTGAAAGTCTT	2	True	NA	NA	False	ATTAAA	-4	NA	161160426	161161651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161160487_161161284
transcript_56303.known	chr2	+	2333	2	FSM	ENSG00000227403.3	ENST00000439050.1	2333	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCATTCTCTATTCATC	-7	True	NA	11	True	ATTAAA	-16	NA	161244738	161249050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161244896_161246874
transcript_56305.known	chr2	+	555	3	FSM	ENSG00000136560.14	ENST00000403609.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	7245	False	NA	NA	False	AATAAA	-19	NA	161179620	161204979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161179762_161203486_161203596_161204674
transcript_56306.known	chr2	+	1130	3	FSM	ENSG00000227403.3	ENST00000436506.3	2466	3	0	1336	0	-1336	multi-exon	FALSE	canonical	0	0	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTGTCTCTTTCTCC	8	True	NA	NA	False	CATAAA	-17	NA	161244753	161247714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161244896_161245423_161245468_161246770
transcript_56310.known	chr2	+	1567	12	FSM	ENSG00000115233.12	ENST00000409682.8	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_5	89.2393012778674	1894	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTGAGATCTTTTTG	-30	True	NA	14	True	AATAAA	-17	NA	161308424	161411717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_161308605_161316436_161316570_161318821_161318874_161367477_161367550_161367783_161367904_161370106_161370178_161371171_161371323_161385463_161385572_161391103_161391179_161395077_161395204_161408836_161408900_161411301
transcript_5633.known	chr1	+	804	2	FSM	ENSG00000031698.13	ENST00000482384.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCTGATTCTATGT	-6	True	NA	NA	False	NA	NA	NA	109213931	109215153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109214129_109214546
transcript_56333.known	chr2	-	3573	26	FSM	ENSG00000197635.11	ENST00000360534.8	3573	26	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_6	5.02219075703024	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTGTGTCTTGAA	-5	True	NA	NA	False	AATAAA	-22	NA	162074215	161992244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_161993385_161994960_161995035_161995299_161995373_162005744_162005810_162008561_162008662_162009240_162009296_162011792_162011988_162014395_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047502_162073398_162073487_162073975
transcript_56337.known	chr2	+	3651	8	FSM	ENSG00000115271.11	ENST00000437150.7	3651	8	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_6	48.5024720598689	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTTTGTCTTTTTAC	-1	True	NA	NA	False	AATAAA	-17	NA	162344131	162363123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_56345.known	chr2	+	1694	8	FSM	ENSG00000115271.11	ENST00000233612.8	1694	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	138.173508196568	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGAAATTTTACATT	144	False	NA	11	True	AATAAA	-21	NA	162344337	162361122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_162344526_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_56347.known	chr2	+	1808	7	FSM	ENSG00000115271.11	ENST00000487445.6	1808	7	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	46.0341057140126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCCTGCTCTGAATC	26	False	NA	NA	False	NA	NA	NA	162344158	162360971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359553_162360216
transcript_56358.known	chr2	-	9537	3	FSM	ENSG00000182263.14	ENST00000333129.4	9537	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	16	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTTGATTTTTATCA	17	True	NA	NA	False	AATAAA	-23	NA	163736008	163602610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_163611807_163734902_163735073_163735837
transcript_56365.known	chr2	-	2415	14	FSM	ENSG00000115290.10	ENST00000263915.8	2415	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	29.8663690461362	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTATTGTACCCATTA	1	True	NA	NA	False	ATTAAA	-20	NA	164621482	164492416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508551_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
transcript_56367.nic	chr2	+	2031	6	ISM	ENSG00000178662.16	ENST00000421875.5	1688	7	40	1709	-11	1279	5prime_fragment	TRUE	canonical	2	5	junction_3	7.94984276574072	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGATACAAATTCTGGC	NA	False	NA	NA	False	AGTAAA	-13	NA	165469686	165677598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_165469741_165494758_165494929_165517872_165517962_165595042_165595214_165657760_165658021_165676311
transcript_5637.known	chr1	-	1584	8	FSM	ENSG00000134222.16	ENST00000369904.7	1584	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	153.593951836706	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-5	True	NA	-11	True	AATAAA	-27	NA	109283115	109279555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_56370.known	chr2	-	3436	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	16.0860187740783	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATGATGTTTTAAAAAA	1	True	NA	NA	False	GATAAA	-18	NA	165794247	165747587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
transcript_56372.known	chr2	-	5415	29	FSM	ENSG00000123607.16	ENST00000243344.8	5415	29	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_21	17.1994230444287	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGCTTTTTATTAAAT	20	True	NA	-3	True	AATAAA	-17	NA	165953776	165873361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_56373.nic	chr2	-	2653	19	ISM	ENSG00000123607.16	ENST00000681606.1	3801	23	-12	15415	2	3141	5prime_fragment	FALSE	canonical	3	56	junction_11	16.5537843944452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAACTTGGTGATGCG	-32	True	NA	NA	False	AGTAAA	-2	NA	165953828	165907715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_56375.known	chr2	-	1844	11	FSM	ENSG00000123607.16	ENST00000464374.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	19.7101496696499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGGACCATT	51	False	NA	NA	False	NA	NA	NA	165953745	165928716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_56377.known	chr2	-	3231	15	FSM	ENSG00000169432.19	ENST00000454569.6	3231	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	3.35334131265871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTAATATGCTAGATT	16	False	NA	NA	False	AATAAA	-17	NA	166375969	166277715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_166278314_166280356_166280596_166281678_166281809_166284485_166284825_166286335_166286624_166288436_166288644_166293230_166293373_166294598_166294663_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_56381.known	chr2	-	2283	7	FSM	ENSG00000169432.19	ENST00000472119.2	2283	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.22952584681651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACATCATTTTCTTAT	NA	False	NA	NA	False	AATAAA	-5	NA	166376001	166302062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_56382.nic	chr2	-	425	2	ISM	ENSG00000169432.19	ENST00000472119.2	2283	7	38	9586	6	-5139	5prime_fragment	FALSE	canonical	2	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGAAAGATGATGA	22	False	NA	NA	False	AAGAAA	-17	NA	166375963	166311648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_166311807_166375696
transcript_56384.known	chr2	-	1342	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	23.7954243967663	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-16	True	NA	-1	True	AATAAA	-23	NA	168890430	168870890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
transcript_5639.nic	chr1	-	1658	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	147.731140237657	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	NA	False	NA	-22	True	AATAAA	-16	NA	109283195	109279566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_56392.known	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	78.4370604305107	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	3	True	NA	0	True	AATAAA	-16	NA	169573865	169528507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_56394.nic	chr2	-	2926	14	NIC	ENSG00000138399.18	novel	4200	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	28	junction_12	76.0358837740561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-3	True	NA	-30	True	AATAAA	-17	NA	169573907	169529754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169571652_169572172_169573668
transcript_56395.nnic	chr2	-	2596	14	NIC	ENSG00000138399.18	novel	4200	15	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	96.7754064312872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-3	True	NA	-30	True	AATAAA	-17	NA	169573907	169529754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_56397.known	chr2	-	2791	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	91.0421581258541	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-23	True	NA	-30	True	AATAAA	-17	NA	169573832	169529754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_5640.nnic	chr1	-	1623	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_3	169.229225053609	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-17	True	NA	-22	True	AATAAA	-16	NA	109283171	109279566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283073
transcript_56404.nic	chr2	-	2222	5	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	4	29683	4	833	5prime_fragment	FALSE	canonical	0	0	junction_2	77.9567187611177	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAATAAGAAT	-19	True	NA	NA	False	AAGAAA	-4	NA	169573828	169559437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_56405.nic	chr2	-	1209	5	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	-75	30775	-32	0	5prime_fragment	FALSE	canonical	0	0	junction_2	77.9567187611177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-3	True	NA	-7	True	AGTAAA	-19	NA	169573907	169560529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_56406.known	chr2	-	1045	4	FSM	ENSG00000138399.18	ENST00000438035.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_2	66.9444213923427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-3	True	NA	-7	True	AGTAAA	-19	NA	169573812	169560529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169560786_169563224_169563351_169571652_169572172_169573668
transcript_56420.known	chr2	+	6357	14	FSM	ENSG00000138398.17	ENST00000260970.8	6357	14	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	48.9780774531414	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	-8	True	NA	15	True	AATAAA	-16	NA	169584350	169641406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_56424.known	chr2	+	6453	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	96.7132649707463	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATACTATAATAAACAG	49	False	NA	-2	True	ATTAAA	-3	NA	169584646	169641389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_56427.known	chr2	+	7125	13	FSM	ENSG00000138398.17	ENST00000677392.1	7125	13	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	50.0982368285884	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	-17	True	NA	-4	True	ATTAAA	-1	NA	169584341	169641387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169631934_169633159_169633248_169636091_169636229_169636412
transcript_56428.known	chr2	+	2615	13	FSM	ENSG00000138398.17	ENST00000409714.7	2615	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	138.773396425812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTTTAATAAACTCGA	-6	True	NA	-14	True	NA	NA	NA	169584352	169637711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_56433.nic	chr2	+	951	10	ISM	ENSG00000138398.17	ENST00000414307.6	1507	12	-8	2568	-8	67	5prime_fragment	FALSE	canonical	3	351	junction_1	41.6727402980728	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAAAAGCGAA	NA	False	NA	NA	False	AAAAAG	-30	NA	169584333	169630951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_56439.known	chr2	+	1507	12	FSM	ENSG00000138398.17	ENST00000414307.6	1507	12	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	38.261820946588	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTATTCTTGTTAAAAA	-17	True	NA	NA	False	NA	NA	NA	169584341	169633519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159
transcript_56440.known	chr2	-	2153	9	FSM	ENSG00000154479.13	ENST00000447353.6	2153	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.07967124868873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTCTGGCTTATTT	-9	True	NA	NA	False	AATAAA	-16	NA	169694405	169645424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169646183_169649181_169649347_169650328_169650522_169654074_169654215_169662279_169662437_169674575_169674770_169674866_169675041_169681006_169681234_169694260
transcript_56446.nnic	chr2	-	2660	2	NNC	ENSG00000154479.13	novel	2153	9	NA	NA	-19	-11516	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTAGTTTCAGGTATTC	-28	True	NA	NA	False	AATAAA	-18	NA	169694424	169686452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_169688949_169694260
transcript_56447.known	chr2	+	2087	6	FSM	ENSG00000213160.10	ENST00000272797.8	2087	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	143.531181281281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCTTACCTGATAATT	8	True	NA	NA	False	TATAAA	-19	NA	169694490	169749804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169735012_169736228_169741384_169741538_169749421
transcript_56448.nic	chr2	+	1249	5	NIC	ENSG00000144362.12	novel	1252	5	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	39.3096680220019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAAGTGTATCACTT	NA	False	NA	6	True	AATAAA	-17	NA	169694428	169701706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_169694623_169695214_169695248_169697360_169697532_169697892_169697983_169700945
transcript_56453.known	chr2	+	1121	4	FSM	ENSG00000144362.12	ENST00000359744.8	1121	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	9.41629792788369	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	-14	True	NA	8	True	AATAAA	-19	NA	169694468	169701708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169700945
transcript_56456.known	chr2	+	908	4	FSM	ENSG00000144362.12	ENST00000438710.5	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	32.3144274623924	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTATCATACTCATT	-12	True	NA	NA	False	NA	NA	NA	169694470	169701378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169694742_169695214_169695248_169697360_169697532_169700945
transcript_56457.known	chr2	+	4081	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	31.5066130624456	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	-23	True	NA	13	True	AATAAA	-15	NA	169733831	169751878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
transcript_5646.nic	chr1	-	1711	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	150.711374379464	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	NA	False	NA	-22	True	AATAAA	-16	NA	109283195	109279566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_56467.known	chr2	+	1650	12	FSM	ENSG00000138385.16	ENST00000260956.9	1650	12	0	0	0	0	multi-exon	FALSE	canonical	3	2756	junction_6	250.638259629456	2965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	2	True	NA	39	True	AATAAA	-28	NA	169798870	169812064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_56486.known	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_7	241.951504670347	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-27	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_56487.known	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_7	340.293750654775	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-33	False	NA	-18	True	AATAAA	-17	NA	169824931	169811756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_56498.known	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_6	233.218781404929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	24	True	NA	-25	True	TTTAAA	-6	NA	169824874	169811813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_56502.known	chr2	-	472	6	FSM	ENSG00000138382.15	ENST00000409340.5	472	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	384.196616330753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	84	False	NA	-18	True	AATAAA	-17	NA	169824814	169811756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169824488_169824641_169824781
transcript_56509.known	chr2	+	619	4	FSM	ENSG00000138385.16	ENST00000461708.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	3126	junction_3	135.816870167966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCACGTTGGAGTGCAG	11	True	NA	NA	False	NA	NA	NA	169798879	169806007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664
transcript_56511.known	chr2	-	1001	7	FSM	ENSG00000138382.15	ENST00000260953.10	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	201.490005266321	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-7	True	NA	-18	True	AATAAA	-17	NA	169824905	169811756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488
transcript_56512.known	chr2	-	675	4	FSM	ENSG00000234350.6	ENST00000667568.2	699	4	24	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAGCACATGTAA	NA	False	NA	NA	False	AATAAA	-33	NA	170770800	170723191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_170723594_170727284_170727329_170727658_170727789_170770701
transcript_56514.nnic	chr2	+	1114	6	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	22	6576	multi-exon	FALSE	canonical	3	29	junction_1	21.9909072118455	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTACCTGGCTACT	79	False	NA	23	True	AATAAA	-39	NA	170770999	170785305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645
transcript_56516.known	chr2	+	1327	4	FSM	ENSG00000239467.7	ENST00000662201.2	1444	4	117	0	-21	0	multi-exon	FALSE	canonical	3	29	junction_1	24.5356882927706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	-17	True	NA	4	True	AATAAA	-15	NA	170771026	170778729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643
transcript_56519.known	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	21	junction_1	27.956315128349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	238	False	NA	9	True	ATTAAA	-22	NA	170771337	170778584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
transcript_56520.known	chr2	+	1291	3	FSM	ENSG00000239467.7	ENST00000662915.2	1411	3	118	2	-20	0	multi-exon	FALSE	canonical	3	13	junction_1	38	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTTGTCTTTGAGGG	-16	True	NA	0	True	AATAAA	-11	NA	170771027	170778725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170771188_170777376_170777426_170777643
transcript_56524.nnic	chr2	+	985	9	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	11	0	multi-exon	FALSE	canonical	3	17	junction_8	23.4170744329859	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATTCTTCCTTATTTG	68	False	NA	38	True	TATAAA	-17	NA	170770988	170798971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645_170784834_170792862_170792921_170798040_170798113_170798769
transcript_56528.nnic	chr2	+	1223	7	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	11	6578	multi-exon	FALSE	canonical	2	3	junction_4	30.8423410265823	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTACCTGGCTACTCA	68	False	NA	25	True	AATAAA	-41	NA	170770988	170785307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170779792_170779889_170782240_170782390_170784645
transcript_56529.nnic	chr2	+	1127	6	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	11	6578	multi-exon	FALSE	canonical	3	29	junction_1	21.9909072118455	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTACCTGGCTACTCA	68	False	NA	25	True	AATAAA	-41	NA	170770988	170785307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645
transcript_56530.known	chr2	+	1029	7	FSM	ENSG00000128683.14	ENST00000344257.9	1029	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.26691175145591	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGATCCTTCAGGATC	2	True	NA	7	True	AATAAA	-18	NA	170816911	170842759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170842568
transcript_56534.known	chr2	+	2447	10	FSM	ENSG00000115806.13	ENST00000234160.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_9	91.4497770822601	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGCTTCCTCAGTTA	14	True	NA	14	True	ATTAAA	-29	NA	170929252	170967130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435_170956560_170961662_170961750_170962838_170962947_170965789
transcript_5654.known	chr1	-	1730	8	FSM	ENSG00000134222.16	ENST00000409267.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	150.778659238079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	29	False	NA	-11	True	AATAAA	-27	NA	109283125	109279555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283027
transcript_56541.known	chr2	-	5723	21	FSM	ENSG00000198586.14	ENST00000431350.7	5723	21	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_18	13.3261960063628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTATTAGCTGTGTT	48	True	NA	-8	True	ATTAAA	-20	NA	171160893	170990822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_56547.nic	chr2	-	1261	11	ISM	ENSG00000198586.14	ENST00000409443.6	2783	21	312	49518	-24	-1011	5prime_fragment	FALSE	canonical	3	82	junction_8	13.1183078177027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGGAAAAACAAAGCAGT	556	False	NA	NA	False	NA	NA	NA	171160588	171046241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_5655.known	chr1	-	1717	8	FSM	ENSG00000134222.16	ENST00000369907.7	1717	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	118.627181384644	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	7	True	NA	-11	True	AATAAA	-27	NA	109283147	109279555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_56551.nic	chr2	-	2436	11	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	34.7539925763933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	NA	False	NA	NA	NA	171434037	171323250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171433882
transcript_56552.nic	chr2	-	1899	11	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	34.7539925763933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGACTCTTCCCATTGT	-21	True	NA	-2	True	AGTAAA	-16	NA	171434037	171323787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171433882
transcript_56555.known	chr2	-	9770	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	24.0744729311688	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	26	True	NA	NA	False	ATTAAA	-20	NA	171433990	171315745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
transcript_56556.known	chr2	-	9791	10	FSM	ENSG00000123600.21	ENST00000612742.5	9791	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	24.588966711731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	171434802	171315745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
transcript_56562.nnic	chr2	-	1643	9	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	34.1227105459106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGACTCTTCCCATTGT	-44	True	NA	-2	True	AGTAAA	-16	NA	171434060	171323787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171433882
transcript_5657.known	chr1	-	1742	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	109.900882988412	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-14	True	NA	-12	True	AATAAA	-26	NA	109283168	109279556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_56570.known	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	46.8852025933793	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	NA	False	NA	7	True	NA	NA	NA	171327065	171323900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
transcript_56575.known	chr2	+	2429	13	FSM	ENSG00000115827.14	ENST00000468592.5	2429	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	35.3304833756284	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAAAATGTTTCTT	-9	True	NA	NA	False	AATAAA	-13	NA	171434216	171482158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171434271_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_56577.known	chr2	-	447	1	FSM	ENSG00000233762.3	ENST00000433675.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	20	False	NA	-49	True	NA	NA	NA	171517716	171517269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171517300_171517700
transcript_5658.nnic	chr1	-	1724	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_7	140.125890919995	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-17	True	NA	-22	True	AATAAA	-16	NA	109283171	109279566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283073
transcript_56580.known	chr2	+	4235	4	FSM	ENSG00000071967.12	ENST00000321348.9	4235	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	2.94392028877595	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTGTGTTATCAAT	-4	True	NA	4	True	AATAAA	-14	NA	171522473	171558129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171522739_171541584_171541794_171553345_171553501_171554523
transcript_56583.known	chr2	+	763	3	FSM	ENSG00000071967.12	ENST00000468308.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	19.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGCCATGTTGCCCGGG	100	False	NA	NA	False	NA	NA	NA	171522347	171551140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171522739_171541584_171541794_171550977
transcript_56584.known	chr2	+	3540	3	FSM	ENSG00000071967.12	ENST00000375252.3	3540	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	25	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAAAGAAGGCAATTGC	-1	True	NA	NA	False	NA	NA	NA	171522476	171557646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171522739_171553345_171553501_171554523
transcript_56586.known	chr2	+	4354	18	FSM	ENSG00000077380.16	ENST00000397119.8	4354	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	287.687173913962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGTATTATTTAAAC	-7	True	NA	NA	False	AATAAA	-16	NA	171687468	171750158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_56587.known	chr2	+	2552	18	FSM	ENSG00000077380.16	ENST00000409453.5	2552	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	305.504891539113	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTTTTACTCCTTAC	24	True	NA	14	True	AATAAA	-26	NA	171687775	171748420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_56590.known	chr2	+	2196	17	FSM	ENSG00000077380.16	ENST00000409317.5	2196	17	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	218.449615186203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGCAGCAAGGAAACTT	177	False	NA	19	True	ATTAAA	-29	NA	171687707	171748011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_56592.known	chr2	+	2494	16	FSM	ENSG00000077380.16	ENST00000508530.5	2494	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_15	190.381324947824	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	25	False	NA	5	True	AATAAA	-17	NA	171687500	171748411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_56594.known	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	70.1136854607493	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	141	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_566.known	chr1	+	949	5	FSM	ENSG00000116288.13	ENST00000465354.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	1283.05424183859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCATTTTAAGATCCAT	10	False	NA	NA	False	NA	NA	NA	7961747	7971521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893
transcript_5660.nnic	chr1	-	1795	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	142.465749553773	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-24	True	NA	-22	True	AATAAA	-16	NA	109283178	109279566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283062
transcript_56601.known	chr2	+	2589	16	FSM	ENSG00000077380.16	ENST00000340296.8	2589	16	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	104.211750243861	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	NA	False	NA	5	True	AATAAA	-17	NA	171687408	171748411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_56605.nic	chr2	+	312	2	ISM	ENSG00000077380.16	ENST00000471482.5	581	3	-42	2824	21	-2824	5prime_fragment	FALSE	canonical	3	363	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	NA	False	NA	55	True	AAGAAA	-12	NA	171687429	171690260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_171687628_171690146
transcript_56606.nic	chr2	+	259	2	ISM	ENSG00000077380.16	ENST00000411953.5	582	6	-26	25090	-15	-2824	5prime_fragment	FALSE	canonical	3	557	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	-23	True	NA	55	True	AAGAAA	-12	NA	171687728	171690260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_171687874_171690146
transcript_56608.known	chr2	-	3936	18	FSM	ENSG00000115840.14	ENST00000422440.7	3936	18	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	7.31448768566919	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAGTATTTCATTGTAT	-5	True	NA	-8	True	TATAAA	-18	NA	171894244	171783404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_171785476_171787570_171787662_171787788_171787948_171791450_171791590_171793626_171793768_171809605_171809687_171810223_171810277_171813338_171813498_171815120_171815203_171826797_171826883_171833962_171834057_171834726_171834866_171837120_171837268_171844368_171844509_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_5661.known	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	149.280997874916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-12	True	NA	-40	True	NA	NA	NA	109283122	109279584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
transcript_56619.known	chr2	+	1634	11	FSM	ENSG00000128708.13	ENST00000264108.5	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	128.548978992445	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTCCACACTTTGC	-8	True	NA	16	True	AATAAA	-20	NA	171922460	171983686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171922508_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_56627.known	chr2	+	1567	10	FSM	ENSG00000128708.13	ENST00000412731.5	1567	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	287.380291771662	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTCCTTCCACACT	-21	True	NA	12	True	AATAAA	-16	NA	171922447	171983682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_171922508_171925536_171925642_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_56634.known	chr2	+	3049	10	FSM	ENSG00000172878.14	ENST00000315796.5	3049	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	12.4672410245985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGGTGTATATATAT	-1	True	NA	5	True	ATTAAA	-15	NA	171999952	172082430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_172000010_172061497_172061656_172063710_172063861_172065603_172065753_172066263_172066307_172070906_172071071_172077796_172077895_172079214_172079263_172080127_172080207_172080327
transcript_56640.known	chr2	+	929	3	FSM	ENSG00000172878.14	ENST00000493035.5	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGACCAGCCTGGCCAA	-11	True	NA	NA	False	NA	NA	NA	171999942	172064414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_172000010_172061497_172061656_172063710
transcript_56644.known	chr2	+	2312	12	FSM	ENSG00000091436.17	ENST00000539448.5	2312	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.8552715051079	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	173075434	173222204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173075671_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173221149
transcript_56649.known	chr2	+	2778	10	FSM	ENSG00000144354.14	ENST00000306721.8	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	215.732344455912	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCTTTTGACTGAAGT	9	True	NA	18	True	AATAAA	-27	NA	173354871	173368997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_56656.known	chr2	+	2500	9	FSM	ENSG00000144354.14	ENST00000347703.7	2500	9	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_2	105.603030259553	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	NA	False	NA	18	True	AATAAA	-14	NA	173354819	173368904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_56659.known	chr2	+	2943	8	FSM	ENSG00000144354.14	ENST00000496441.5	2943	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_2	94.3305088397131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTGATATTAAAAACTA	9	True	NA	1	True	AATAAA	-22	NA	173354871	173368500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_56669.nnic	chr2	+	1303	3	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGTCCTGTGTTTAT	NA	False	NA	5	True	AATAAA	-2	NA	173532840	173693656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_173533037_173533205_173533340_173692683
transcript_56672.nnic	chr2	+	1485	2	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGTCCTGTGTTTAT	NA	False	NA	5	True	AATAAA	-2	NA	173532827	173693656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_173533340_173692683
transcript_56674.known	chr2	+	317	1	FSM	ENSG00000270460.1	ENST00000604994.1	317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	173811075	173811392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_173811100_173811400
transcript_56685.known	chr2	-	4251	11	FSM	ENSG00000138430.16	ENST00000284719.8	4251	11	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_10	67.8810724723763	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGACTTTTTTGT	1	True	NA	-6	True	AATAAA	-15	NA	174248532	174072446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_5669.known	chr1	-	1826	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	142.21511483977	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	NA	False	NA	-20	True	AATAAA	-18	NA	109283186	109279564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
transcript_56694.known	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	259.493999550027	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-10	True	NA	-3	True	AATAAA	-16	NA	174248599	174075007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
transcript_56700.known	chr2	-	1270	8	FSM	ENSG00000138430.16	ENST00000428402.6	1270	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	311.260767373793	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	114	False	NA	-5	True	AATAAA	-14	NA	174248475	174075009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_56705.known	chr2	-	711	7	FSM	ENSG00000138430.16	ENST00000392560.6	711	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	320.876274182641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAACATACAACTTCCAA	NA	False	NA	-25	True	AATAAA	-17	NA	174124315	174075408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174124263
transcript_56715.known	chr2	-	1918	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	89.1079245758884	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-31	True	NA	-5	True	AATAAA	-17	NA	174395712	174348021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
transcript_56721.known	chr2	+	3052	8	FSM	ENSG00000144306.15	ENST00000272732.11	3052	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	26.2662971761712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACCAGAATGGTACATT	-25	True	NA	NA	False	NA	NA	NA	174395729	174429575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174395818_174398274_174398443_174399921_174400104_174400989_174401190_174404102_174404316_174422884_174423048_174424474_174424650_174427712
transcript_56722.known	chr2	+	943	4	FSM	ENSG00000144306.15	ENST00000549848.5	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	15.369522511198	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATATGGTCAGCTAAT	NA	False	NA	NA	False	NA	NA	NA	174410081	174427895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174410504_174422884_174423048_174424474_174424650_174427712
transcript_56723.known	chr2	+	658	3	FSM	ENSG00000144306.15	ENST00000475928.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	25.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATTAAACTACGTATA	NA	False	NA	NA	False	NA	NA	NA	174410343	174428035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174410504_174424474_174424650_174427712
transcript_56726.known	chr2	-	1772	5	FSM	ENSG00000115935.18	ENST00000409415.7	1772	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	5.71729831301464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTCTTTGTAATCT	20	True	NA	-1	True	ATTAAA	-20	NA	174682871	174571168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_56728.known	chr2	-	553	3	FSM	ENSG00000115935.18	ENST00000487291.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-25	True	NA	NA	False	NA	NA	NA	174682916	174676336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174676667_174677044_174677125_174682773
transcript_56729.known	chr2	+	411	1	FSM	ENSG00000235655.3	ENST00000369387.4	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	84	False	NA	NA	False	NA	NA	NA	174719907	174720318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_174719900_174720300
transcript_56731.known	chr2	-	3156	13	FSM	ENSG00000128656.15	ENST00000409900.9	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_7	59.4565083812436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAAGATTATTCCAAAA	0	True	NA	NA	False	AATAAA	-16	NA	175005381	174798808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893
transcript_56735.known	chr2	-	1719	8	FSM	ENSG00000128656.15	ENST00000650731.1	1719	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	109.336962773672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGTACAACACAGC	-2	True	NA	-35	True	AATAAA	-16	NA	174847596	174799511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174847312
transcript_56737.known	chr2	-	2232	7	FSM	ENSG00000128656.15	ENST00000295497.12	2232	7	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	30.0578146614524	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTTGTTTACTGTTAA	10	True	NA	44	True	ATTAAA	-20	NA	174847555	174799312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879
transcript_56740.known	chr2	-	1989	15	FSM	ENSG00000115966.18	ENST00000428760.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	69.3993177640995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTGTAGCAGCAGT	-5	True	NA	NA	False	ATTAAA	-10	NA	175168169	175074473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175074836_175080659_175080766_175092542_175092617_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56743.known	chr2	-	1861	14	FSM	ENSG00000115966.18	ENST00000456655.5	1861	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	71.2260340675661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTACTTGAAATTA	-5	True	NA	NA	False	NA	NA	NA	175168169	175074504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175074836_175080659_175080766_175092542_175092617_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56744.known	chr2	-	4164	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	35.5021459473073	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTGCTTGTTC	-39	True	NA	-13	True	AATAAA	-17	NA	175168203	175072258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56749.known	chr2	-	4079	13	FSM	ENSG00000115966.18	ENST00000345739.9	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_9	31.7774378381196	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTCTCTTACCTT	-42	True	NA	-4	True	AATAAA	-26	NA	175168206	175072249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56762.known	chr2	-	1335	8	FSM	ENSG00000115966.18	ENST00000409833.5	1335	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	43.4670881829234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTGCTTTGCTGTGGT	-5	True	NA	NA	False	ATTAAA	-15	NA	175168169	175114242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_56764.nic	chr2	-	754	3	ISM	ENSG00000115966.18	ENST00000413123.5	681	6	-93	9227	-31	-9027	5prime_fragment	FALSE	canonical	3	207	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAGAAAGAAAGAAA	111	False	NA	NA	False	ATTAAA	-34	NA	175168237	175136019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_175136487_175151059_175151159_175168049
transcript_56765.known	chr2	-	2587	5	FSM	ENSG00000154518.10	ENST00000284727.9	2587	5	0	0	0	0	multi-exon	FALSE	canonical	3	2630	junction_4	375.464628826738	2527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGGTGCTGGTTT	-3	True	NA	-6	True	AATAAA	-18	NA	175181710	175176257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181467_175181655
transcript_56766.known	chr2	-	795	5	FSM	ENSG00000154518.10	ENST00000409194.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	1483.81743738911	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGAAGCTACAGCAG	-3	True	NA	65	True	NA	NA	NA	175181710	175178066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181484_175181655
transcript_56769.known	chr2	-	1313	4	FSM	ENSG00000154518.10	ENST00000497075.5	1313	4	0	0	0	0	multi-exon	FALSE	canonical	3	2630	junction_3	433.396662039138	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTATTTCCAAAGTCATT	-3	True	NA	-54	True	NA	NA	NA	175181710	175178185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175179251_175180097_175180179_175181354_175181467_175181655
transcript_56771.known	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3219	junction_1	156.889203650928	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	4	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
transcript_56774.known	chr2	-	7542	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	9.05960202706989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTTATCACTCCATA	5	True	NA	-21	True	AATAAA	-26	NA	176002267	175923881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
transcript_56776.known	chr2	-	345	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAACGTGTTC	126	False	NA	NA	False	NA	NA	NA	176201252	176200907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_176200900_176201300
transcript_56779.known	chr2	+	1592	11	FSM	ENSG00000128654.14	ENST00000420864.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	216.426800558526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	NA	False	NA	10	True	AATAAA	-21	NA	176269394	176338025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_176269670_176270215_176270420_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_5678.known	chr1	-	839	4	FSM	ENSG00000134222.16	ENST00000459765.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	173.49415616159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGTGATGTGGTGA	9	True	NA	NA	False	AATAAA	-19	NA	109283145	109281403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109282061_109282517_109282576_109282679_109282732_109283073
transcript_56781.known	chr2	+	1341	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	45.0801754901445	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	4	True	NA	10	True	AATAAA	-21	NA	176269441	176338025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_56786.known	chr2	+	799	7	FSM	ENSG00000128654.14	ENST00000443241.5	799	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	214.537228056629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTCTTAACTTTTGA	32	False	NA	NA	False	NA	NA	NA	176269469	176337679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_176269670_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_56791.known	chr2	+	2067	11	FSM	ENSG00000170144.21	ENST00000392524.6	2067	11	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_1	432.517618138267	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	NA	False	NA	-31	True	GATAAA	-36	NA	177212562	177220085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_56793.known	chr2	+	3111	11	FSM	ENSG00000170144.21	ENST00000678111.1	3111	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_10	1023.57313368415	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	NA	False	NA	-10	True	AATAAA	-1	NA	177212723	177223942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_56799.known	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	869.440647773038	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	NA	False	NA	6	True	AATAAA	-17	NA	177212748	177223958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_56801.known	chr2	+	3028	11	FSM	ENSG00000170144.21	ENST00000676874.1	3028	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_10	1223.11465120814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	NA	False	NA	-10	True	AATAAA	-1	NA	177212740	177223942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_56804.known	chr2	+	1911	11	FSM	ENSG00000170144.21	ENST00000679328.1	1911	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	1041.30339478943	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	471	False	NA	-31	True	GATAAA	-36	NA	177213265	177220085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177213419_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_56806.known	chr2	+	5600	10	FSM	ENSG00000170144.21	ENST00000676681.1	5600	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_7	1028.56307536291	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212723	177223920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177219407
transcript_56808.known	chr2	+	2926	10	FSM	ENSG00000170144.21	ENST00000677043.1	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_9	1300.8990433495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGGTGAATATTTTGA	NA	False	NA	51	True	NA	NA	NA	177212723	177223898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177222059
transcript_56861.known	chr2	-	2651	5	FSM	ENSG00000116044.16	ENST00000397063.8	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	125.230786949536	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGATTCCTTTGA	1328	False	NA	-3	True	AATAAA	-24	NA	177263800	177230304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177263402
transcript_56862.known	chr2	-	2446	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	21.6491916708223	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGGGATTCCTT	10	True	NA	-6	True	AATAAA	-21	NA	177264727	177230307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
transcript_56863.known	chr2	-	3799	1	FSM	ENSG00000196659.10	ENST00000408939.4	3799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTATTTTCTTTAGGG	0	True	NA	-6	True	ATTAAA	-31	NA	177552796	177548997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_177549000_177552800
transcript_56864.known	chr2	-	315	3	FSM	ENSG00000249909.1	ENST00000504253.1	315	3	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCGGAAATATGTTATAAG	3828	False	NA	NA	False	NA	NA	NA	178104470	178092502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178092585_178092900_178092965_178104301
transcript_56865.nnic	chr2	+	1874	10	NNC	ENSG00000155636.15	novel	1803	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	33.1453961199835	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGACTTATTTATGTGAA	10	False	NA	NA	False	AATAAA	-21	NA	178112403	178129656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121179_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129358
transcript_56866.known	chr2	+	1788	10	FSM	ENSG00000155636.15	ENST00000616198.4	1788	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	35.5089972948954	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGACTTATTTATGT	4	True	NA	NA	False	AATAAA	-18	NA	178112454	178129653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121173_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129396
transcript_56867.nic	chr2	+	2341	10	NIC	ENSG00000155636.15	novel	1803	10	NA	NA	-20	-2151	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	34.279173391362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATATACTAATTTACTAG	10	False	NA	NA	False	ATTAAA	-16	NA	178112403	178134625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121179_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178133860
transcript_5687.known	chr1	-	3815	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	0	0	0	multi-exon	FALSE	canonical	3	1864	junction_8	187.902193640734	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTAATGACTTGCA	-16	True	NA	-9	True	ATTAAA	-17	NA	109426448	109399041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
transcript_56870.known	chr2	-	1885	9	FSM	ENSG00000180228.14	ENST00000677584.1	1885	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	363.533698575524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-4	True	NA	-51	True	AATAAA	-12	NA	178451152	178431434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447455_178447587_178450241_178450412_178450965
transcript_56871.known	chr2	-	1616	9	FSM	ENSG00000180228.14	ENST00000424699.5	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	358.629487598273	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCAGGGAACATGAT	-3	True	NA	-123	True	NA	NA	NA	178451151	178431653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
transcript_56876.known	chr2	-	1780	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	295.382906114233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-9	True	NA	-51	True	AATAAA	-12	NA	178451157	178431434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
transcript_56877.known	chr2	-	1211	8	FSM	ENSG00000180228.14	ENST00000487082.5	1211	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_7	303.73995322261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTATCTCCTCATA	9	True	NA	NA	False	NA	NA	NA	178450764	178431965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450561
transcript_56878.known	chr2	-	1770	8	FSM	ENSG00000180228.14	ENST00000325748.9	1770	8	0	0	0	0	multi-exon	TRUE	canonical	3	676	junction_2	100.020610121013	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	-27	True	NA	-30	True	AATAAA	-33	NA	178451175	178431413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_5688.nnic	chr1	-	912	9	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	728.684934917005	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGACTGTTCTC	NA	False	NA	-13	True	AATAAA	-16	NA	109426456	109401849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426404
transcript_56889.known	chr2	-	1610	7	FSM	ENSG00000180228.14	ENST00000677689.1	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	373.167820453777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-9	True	NA	-51	True	AATAAA	-12	NA	178451157	178431434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450965
transcript_5689.nnic	chr1	-	1017	9	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	710.238296278087	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGACTGTTCTC	NA	False	NA	-13	True	AATAAA	-16	NA	109426576	109401849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426419
transcript_56891.known	chr2	-	1546	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	292.820432271308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	6	True	NA	-51	True	AATAAA	-12	NA	178451142	178431434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
transcript_56896.known	chr2	-	1455	6	FSM	ENSG00000180228.14	ENST00000677981.1	1455	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	351.616836912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	15	True	NA	-51	True	AATAAA	-12	NA	178451133	178431434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178450965
transcript_56902.known	chr2	-	3890	5	FSM	ENSG00000180228.14	ENST00000677806.1	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_4	44.2005373270507	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACAGGTGAAATTGGT	NA	False	NA	NA	False	NA	NA	NA	178451278	178440138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_56904.known	chr2	+	563	4	FSM	ENSG00000223960.8	ENST00000691078.1	1139	4	0	576	0	-112	multi-exon	FALSE	canonical	2	5	junction_2	9.20144916122817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCATTTCATTAATGA	-10	True	NA	NA	False	NA	NA	NA	178413944	178433515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178414114_178426365_178426506_178430769_178430890_178433381
transcript_56909.known	chr2	+	5659	3	FSM	ENSG00000223960.8	ENST00000665039.1	5659	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATAAATATTTATTGGA	-2	True	NA	NA	False	AATGAA	-9	NA	178413664	178434067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178414114_178426365_178430890_178433381
transcript_56910.known	chr2	-	1999	8	FSM	ENSG00000180228.14	ENST00000677206.1	1999	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	375.1967103115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	387	False	NA	-51	True	AATAAA	-12	NA	178450761	178431434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241
transcript_56911.known	chr2	-	1824	8	FSM	ENSG00000180228.14	ENST00000677386.1	1824	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	312.389409002839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	NA	False	NA	-56	True	AATAAA	-7	NA	178451278	178431439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443289_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_56912.known	chr2	-	1030	5	FSM	ENSG00000079150.19	ENST00000233092.10	1030	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.1317035302793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	1	True	NA	-14	True	AATAAA	-25	NA	178478575	178465598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178477061_178477214_178478278
transcript_56913.known	chr2	-	666	4	FSM	ENSG00000079150.19	ENST00000434643.6	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	28.6472802664872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTATTTCTACTTT	77	False	NA	NA	False	AATACA	-27	NA	178478499	178465769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178469651_178469783_178477061_178477214_178478278
transcript_56914.known	chr2	-	764	4	FSM	ENSG00000079150.19	ENST00000435079.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37.7211994624891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTATTTTTCCCCTA	23	True	NA	-106	True	TATAAA	-25	NA	178478553	178465690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178478278
transcript_56916.known	chr2	-	638	3	FSM	ENSG00000079150.19	ENST00000419184.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	31.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTATTTACTGTACTT	-19	True	NA	NA	False	NA	NA	NA	178478595	178465744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178469651_178469786_178478278
transcript_56918.known	chr2	-	1103	3	FSM	ENSG00000079150.19	ENST00000464248.1	1103	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATAGTTGTATATCTC	23	True	NA	NA	False	TATAAA	-40	NA	178478553	178465255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178477061_178477214_178478278
transcript_56919.known	chr2	-	555	2	FSM	ENSG00000079150.19	ENST00000685403.1	2545	2	-24	2014	0	-8	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTATTTGCTATTT	-24	True	NA	-114	True	TATAAA	-17	NA	178478600	178465698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_178465932_178478278
transcript_56922.known	chr2	+	3002	5	FSM	ENSG00000237298.10	ENST00000657210.1	3002	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.65206734782504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	178523166	178540779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178523637_178531313_178531579_178535731_178535829_178537603_178537692_178538697
transcript_56924.known	chr2	+	2691	4	FSM	ENSG00000237298.10	ENST00000664161.1	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	-8	True	NA	NA	False	NA	NA	NA	178523212	178540779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178523637_178535731_178535829_178537603_178537692_178538697
transcript_56926.nic	chr2	+	596	2	ISM	ENSG00000237298.10	ENST00000664161.1	2691	4	-29	4905	1	-1203	5prime_fragment	FALSE	canonical	3	26	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAATTTAGCAACATCT	NA	False	NA	NA	False	AAAAAG	-1	NA	178523183	178535874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_178523637_178535731
transcript_56927.known	chr2	+	587	2	FSM	ENSG00000237298.10	ENST00000592161.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTCTACTGAATTGT	-5	True	NA	NA	False	AATAAA	-3	NA	178523215	178527361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_178523637_178527195
transcript_56934.known	chr2	-	10671	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	11.7811649572895	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGACATTCCTGTCTTT	-30	True	NA	NA	False	AATAAA	-33	NA	179264832	179101677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
transcript_56938.known	chr2	-	2610	8	FSM	ENSG00000144331.20	ENST00000336917.9	2610	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	12.2057196361679	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAATCTGTTTGT	-2	True	NA	-27	True	AATAAA	-6	NA	179562588	179441992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_179443469_179444875_179444978_179445549_179445729_179446524_179446771_179483271_179483435_179518527_179518639_179544826_179544970_179562398
transcript_56943.known	chr2	-	2392	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_13	34.9156482551132	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACAAGAACACGG	-8	True	NA	-89	True	GATAAA	-40	NA	180007113	179945620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
transcript_56953.known	chr2	+	1555	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_1	95.4869624608512	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTCGTAATATT	-7	True	NA	15	True	AATAAA	-17	NA	180980604	181063425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_56957.known	chr2	+	2070	16	FSM	ENSG00000115232.14	ENST00000233573.6	2070	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.27540843131393	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGGAATATTTTCCTTT	42	True	NA	NA	False	AAAAAG	-16	NA	181457427	181509805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_181457852_181458195_181458318_181474959_181475067_181475158_181475289_181478756_181478825_181480136_181480267_181481597_181481684_181482359_181482423_181482513_181482652_181485880_181485993_181493324_181493420_181494721_181494813_181495370_181495417_181495782_181495938_181498622_181498778_181509657
transcript_56958.known	chr2	+	501	4	FSM	ENSG00000150722.11	ENST00000479855.1	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.35412613473634	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGTGATTCTTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	182030882	182117511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182030980_182061441_182061480_182063730_182063792_182117206
transcript_56962.known	chr2	+	20144	24	FSM	ENSG00000077232.19	ENST00000264065.12	20144	24	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_11	69.7077615670186	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-18	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_56966.known	chr2	+	20086	24	FSM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	154.878158099626	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-20	True	NA	NA	False	AATAAA	-20	NA	182716254	182794464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743657_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_56969.known	chr2	+	20006	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	139.93705786992	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-18	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_56978.known	chr2	-	2637	6	FSM	ENSG00000162998.5	ENST00000295113.5	2637	6	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_4	26.20381651592	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTATGTTTCCTTCTA	4	True	NA	0	True	AATAAA	-19	NA	182866637	182833274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_182834966_182837947_182838012_182838408_182838614_182842477_182842544_182858785_182858834_182866074
transcript_56985.known	chr2	+	5191	4	FSM	ENSG00000162999.13	ENST00000354221.5	5191	4	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGGAAGACACACAATT	-7	True	NA	NA	False	NA	NA	NA	183078746	183100008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_183079160_183083507_183083555_183087039_183087193_183095430
transcript_56991.known	chr2	+	1545	9	FSM	ENSG00000163002.13	ENST00000295119.9	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	28.8593030927637	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	2	True	NA	27	True	AATAAA	-15	NA	183124442	183161680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183151507_183151650_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_56993.known	chr2	+	998	8	FSM	ENSG00000163002.13	ENST00000374930.7	998	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	103.980374914437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGAAAGAAGCCTTTTT	6	True	NA	NA	False	NA	NA	NA	183124411	183161244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_56995.nnic	chr2	+	1726	5	Fusion	ENSG00000163002.13_ENSG00000272800.3	novel	755	5	NA	NA	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	120.781569372152	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGAGTGTAAGAATGC	-8	True	NA	NA	False	AATAAA	-29	NA	183124432	183215414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183214110
transcript_57.known	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00163_+_0_500
transcript_57001.known	chr2	+	2032	10	FSM	ENSG00000065548.18	ENST00000337859.11	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_6	73.4737712502114	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCTTTTTTTAAGTT	-36	True	NA	29	True	AATAAA	-37	NA	186486259	186509361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542
transcript_57006.nic	chr2	+	869	6	ISM	ENSG00000065548.18	ENST00000337859.11	2032	10	-81	5199	-74	63	5prime_fragment	FALSE	canonical	3	488	junction_4	79.8884221899519	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGAGAAAGAAGATG	NA	False	NA	NA	False	GATAAA	-3	NA	186486178	186504162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031
transcript_57014.nic	chr2	-	1223	9	NIC	ENSG00000003436.16	novel	3859	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	53.9083423506974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAGAAGCA	-1	True	NA	NA	False	ATTAAA	-4	NA	187554449	187467001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187529363_187529486_187554199
transcript_57017.known	chr2	-	3649	8	FSM	ENSG00000003436.16	ENST00000392365.5	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	26.9640728468419	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	6978	False	NA	NA	False	AGTAAA	-24	NA	187513641	187464229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
transcript_57018.known	chr2	-	3859	8	FSM	ENSG00000003436.16	ENST00000233156.9	3859	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	36.9815177225222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	13	True	NA	NA	False	AGTAAA	-24	NA	187554435	187464229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
transcript_57022.known	chr2	-	1119	8	FSM	ENSG00000003436.16	ENST00000409676.5	1119	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	59.6003698112072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCTTCTCACTGCACC	17	True	NA	NA	False	AATAAA	-27	NA	187554431	187478577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_187478804_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615_187513647_187554199
transcript_57023.known	chr2	-	1088	7	FSM	ENSG00000003436.16	ENST00000339091.8	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	54.5356662092698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAACATAGTCTTCTCA	10	True	NA	NA	False	AATAAA	-20	NA	187554438	187478584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_187478804_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
transcript_57024.nic	chr2	-	715	3	ISM	ENSG00000003436.16	ENST00000421427.5	804	5	-43	32294	-43	-32159	5prime_fragment	FALSE	canonical	3	23	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCAGCATTCTTACC	-1	True	NA	NA	False	AATAAA	-18	NA	187565803	187529174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_187529486_187554199_187554350_187565549
transcript_57025.nnic	chr2	-	900	3	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-43	-60961	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-1	True	NA	-1	True	AATAAA	-22	NA	187565803	187557976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_187558398_187560648_187560874_187565549
transcript_57026.nnic	chr2	-	675	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-43	-60961	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-1	True	NA	-1	True	AATAAA	-22	NA	187565803	187557976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_187558398_187565549
transcript_57030.nnic	chr2	+	2285	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-392	0	at_least_one_novel_splicesite	FALSE	canonical	3	318	junction_1	111	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	37	False	NA	29	True	AATAAA	-17	NA	188033401	188040601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_188034061_188035602_188035757_188039129
transcript_57033.nnic	chr2	+	2441	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-368	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	207.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	-1	True	NA	29	True	AATAAA	-17	NA	188033425	188040601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_188034061_188035422_188035757_188039129
transcript_57041.nnic	chr2	+	2958	2	FSM	ENSG00000289205.1	ENST00000686960.1	1739	2	-1219	0	-1219	0	multi-exon	FALSE	canonical	3	844	junction_1	0	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	NA	False	NA	29	True	AATAAA	-17	NA	188032574	188040601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188034061_188039129
transcript_57049.nic	chr2	+	2552	14	NIC	ENSG00000144366.16	novel	2643	13	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	262.919160973674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	134	False	NA	36	True	NA	NA	NA	188291853	188595059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_188292167_188383762_188383890_188466474_188466569_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_57065.known	chr2	+	2643	13	FSM	ENSG00000144366.16	ENST00000409843.5	2643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	245.080754831727	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	-2	True	NA	36	True	NA	NA	NA	188291668	188595059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_57074.nic	chr2	+	2580	13	NIC	ENSG00000144366.16	novel	3347	12	NA	NA	5	16	combination_of_known_junctions	FALSE	canonical	3	71	junction_2	203.695220993413	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCTCAGTTTA	-1	True	NA	52	True	NA	NA	NA	188292776	188595075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_188293113_188383762_188383890_188466474_188466569_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_57085.nnic	chr2	+	2577	13	NIC	ENSG00000144366.16	novel	3544	13	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	265.447054775315	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	719	False	NA	36	True	NA	NA	NA	188292748	188595059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_188293181_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_57087.nnic	chr2	+	2614	13	NNC	ENSG00000144366.16	novel	3347	12	NA	NA	4	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.074754295526	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCTCAGTTTA	-2	True	NA	52	True	NA	NA	NA	188292775	188595075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_188293113_188334340_188334468_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_5709.known	chr1	+	2448	11	FSM	ENSG00000162650.17	ENST00000683729.1	2448	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.8844867961436	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3343	False	NA	21	True	AAAAAG	-19	NA	109483904	109492734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_57091.known	chr2	+	3294	12	FSM	ENSG00000144366.16	ENST00000409830.6	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	133.183400549086	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	-11	True	NA	NA	False	AATAAA	-15	NA	188291873	188595926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_57097.known	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	110.391115344974	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	-6	True	NA	NA	False	AATAAA	-20	NA	188292771	188595931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_57108.known	chr2	+	1932	12	FSM	ENSG00000144366.16	ENST00000409609.5	1932	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	180.635883240428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTTGTGTCTGAGTT	752	False	NA	NA	False	NA	NA	NA	188293817	188594281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188294394_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_5712.known	chr1	+	4912	3	FSM	ENSG00000174151.15	ENST00000420578.7	4912	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTCTTGTCCTTC	2	True	NA	23	True	ATTAAA	-20	NA	109494093	109500435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109494288_109495142_109495181_109495755
transcript_57130.known	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	173.955933117174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	20	False	NA	NA	False	NA	NA	NA	188291945	188542122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_57136.known	chr2	+	1242	7	FSM	ENSG00000144366.16	ENST00000409637.7	1242	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	140.061196942226	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAAATAAATATTCTT	15	False	NA	-25	True	NA	NA	NA	188292838	188541716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_5714.known	chr1	+	9044	9	FSM	ENSG00000065135.12	ENST00000369851.7	9044	9	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	75.2420053892771	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGGCAAAAGAAAGATAAT	8	True	NA	NA	False	AATAAA	-29	NA	109548614	109600195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592344
transcript_57150.known	chr2	-	6829	54	FSM	ENSG00000204262.14	ENST00000374866.9	6829	54	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_51	54.7598205753836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTCTCAAATTTC	0	True	NA	-4	True	AATAAA	-16	NA	189179761	189031897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189034217_189034915_189035156_189036615_189036804_189039271_189039564_189041585_189041694_189042719_189042774_189043150_189043259_189045178_189045233_189045799_189045908_189048208_189048263_189049346_189049455_189050568_189050677_189051319_189051482_189052171_189052226_189052748_189052803_189052910_189053019_189053423_189053478_189053894_189053949_189054158_189054213_189056972_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009_189063064_189063171_189063271_189063979_189064034_189064556_189064656_189065003_189065058_189066389_189066498_189066728_189066783_189068014_189068114_189068225_189068271_189068785_189068885_189072039_189072094_189075392_189075438_189078515_189078570_189079062_189079108_189079977_189080032_189080989_189081044_189083983_189084038_189085159_189085214_189085718_189085773_189086725_189086771_189088694_189088773_189092309_189092421_189097276_189097331_189098726_189098760_189100106_189100140_189104263_189104278_189110224_189110450_189179507
transcript_57152.nic	chr2	-	1778	2	ISM	ENSG00000204262.14	ENST00000374866.9	6829	54	-44	77072	-44	-23800	5prime_fragment	FALSE	canonical	3	171	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAATAAAGTAATTCTCTT	-1	True	NA	NA	False	NA	NA	NA	189179805	189108969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_189110450_189179507
transcript_57155.known	chr2	+	2647	21	FSM	ENSG00000115368.10	ENST00000314761.9	2647	21	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_16	39.6382075780427	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	0	True	NA	26	True	AATAAA	-29	NA	189441473	189475552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_57163.nnic	chr2	-	3584	9	NNC	ENSG00000138449.11	novel	3330	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	272.791014331484	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGAATTCTGTTCC	-2	True	NA	-9	True	TATAAA	-20	NA	189580786	189560589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_189562192_189563583_189564226_189565353_189565600_189571714_189571842_189572845_189572962_189575160_189575321_189578218_189578473_189579812_189579881_189580417
transcript_57167.known	chr2	-	3330	8	FSM	ENSG00000138449.11	ENST00000261024.7	3330	8	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_3	51.5957599903286	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGAATTCTGTTCC	-2	True	NA	-9	True	TATAAA	-20	NA	189580786	189560589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189562192_189563583_189564226_189565353_189565600_189571714_189571842_189572845_189572962_189575160_189575321_189579812_189579881_189580417
transcript_5717.known	chr1	+	4081	19	FSM	ENSG00000116337.20	ENST00000528667.7	4081	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	52.0247151616837	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	-24	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109620279_109620913_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_57172.known	chr2	+	2411	6	FSM	ENSG00000138381.10	ENST00000260952.9	2411	6	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_5	53.777318638995	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	-14	True	NA	67	True	TTTAAA	-6	NA	189661458	189670831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040_189667597_189667763_189667946_189670440
transcript_57174.nic	chr2	+	2431	6	NIC	ENSG00000138381.10	novel	2411	6	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	165.723142620456	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	NA	False	NA	67	True	TTTAAA	-6	NA	189661392	189670831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040_189667597_189667763_189667946_189670440
transcript_57179.known	chr2	+	643	4	FSM	ENSG00000286053.2	ENST00000607829.6	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	50.5459087255229	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	-14	True	NA	19	True	AATAAA	-19	NA	189661458	189666401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040
transcript_5718.known	chr1	+	3728	18	FSM	ENSG00000116337.20	ENST00000342115.8	3728	18	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	20.6241703198961	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	-24	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_57180.known	chr2	+	535	4	FSM	ENSG00000286053.2	ENST00000607690.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	203.201596669143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	48	True	NA	19	True	AATAAA	-19	NA	189661520	189666401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040
transcript_57189.nic	chr2	-	2035	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	12	junction_8	37.1306813834597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-21	True	NA	-7	True	AATAAA	-18	NA	189762799	189746659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762566
transcript_5719.known	chr1	+	3590	17	FSM	ENSG00000116337.20	ENST00000667949.2	3590	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	44.0750425411026	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATGAGGCAGGTGGG	-24	True	NA	8	True	AATAAA	-8	NA	109619836	109632044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109620279_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_57190.known	chr2	-	1910	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	26.6493433314969	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-14	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_57191.nic	chr2	-	2229	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	9	junction_8	33.3757022398031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-17	True	NA	-7	True	AATAAA	-18	NA	189762795	189746659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762531
transcript_57193.nic	chr2	-	2082	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	67	junction_1	18.0481127822274	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	425	False	NA	-7	True	AATAAA	-18	NA	189762801	189746659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_57204.known	chr2	-	914	4	FSM	ENSG00000128694.12	ENST00000517895.5	914	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	41.2499158248299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAGAACATTTGGCCA	-14	True	NA	NA	False	AATAAA	-34	NA	189762792	189754286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189754346_189755172_189755561_189761419_189761661_189762566
transcript_57219.known	chr2	+	3156	13	FSM	ENSG00000064933.19	ENST00000441310.7	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_10	44.7911046476368	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	-43	True	NA	28	True	AATAAA	-18	NA	189784449	189877629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_57232.known	chr2	+	2576	12	FSM	ENSG00000064933.19	ENST00000447232.6	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	127.452729853493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	51	True	NA	28	True	AATAAA	-18	NA	189784543	189877629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189867798_189867930_189873495_189873657_189877271
transcript_57237.known	chr2	+	2795	12	FSM	ENSG00000064933.19	ENST00000409823.7	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	122.929463077661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATATGTTTAAGAAGAT	8	True	NA	-4	True	NA	NA	NA	189784500	189877436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_5725.nnic	chr1	+	1230	9	NNC	ENSG00000134184.13	novel	1164	8	NA	NA	-517	0	intron_retention	FALSE	canonical	2	9	junction_1	63.9648340887397	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	109687296	109693745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_109687388_109687841_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
transcript_57250.nic	chr2	+	1325	9	ISM	ENSG00000064933.19	ENST00000441310.7	3156	13	-25	23221	-25	1646	5prime_fragment	FALSE	canonical	3	384	junction_3	30.1203315884802	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCAAATGTTGATACTT	297	False	NA	NA	False	AATAAA	-21	NA	189784424	189854408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238
transcript_57256.known	chr2	+	948	5	FSM	ENSG00000064933.19	ENST00000374826.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	189.584249082037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCATGTTCAAAATAATT	15	True	NA	NA	False	ATTAAA	-16	NA	189784507	189806846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189806422
transcript_57259.known	chr2	-	2150	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	502.831171965303	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAACTGAATTCG	-13	True	NA	41	True	ATTAAA	-20	NA	189784339	189770266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
transcript_5726.known	chr1	+	1394	8	FSM	ENSG00000168765.18	ENST00000369836.9	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	13.399664936414	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	-15	True	NA	13	True	AATAAA	-13	NA	109656098	109661700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_57264.nnic	chr2	-	1207	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	265	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	531.025893907256	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTTCTCGTTTTAT	540	False	NA	-6	True	ATTAAA	-17	NA	189784053	189771313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189783878
transcript_5727.known	chr1	+	1321	8	FSM	ENSG00000168765.18	ENST00000326729.9	1321	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	47.9178719162234	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATCTTAGTGGTGTC	8	True	NA	3	True	AATAAA	-17	NA	109656121	109665496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109665010
transcript_57274.known	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_3	236.114849643605	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	2	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
transcript_57277.nnic	chr2	-	1103	4	NNC	ENSG00000128699.14	novel	2009	4	NA	NA	259	-3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	541.557219712028	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTTCTCGTTTTAT	534	False	NA	-6	True	ATTAAA	-17	NA	189784059	189771313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783878
transcript_5728.known	chr1	+	1166	8	FSM	ENSG00000213366.13	ENST00000241337.9	1166	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	11.647895491794	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	-19	True	NA	NA	False	AGTAAA	-13	NA	109668056	109675286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669470_109669572_109671286_109671383_109671472_109671584_109674746
transcript_57284.known	chr2	+	1882	4	FSM	ENSG00000064933.19	ENST00000409985.5	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	38.5054108751831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGTCTTCATTTCA	-43	True	NA	25	True	ATTAAA	-23	NA	189784449	189807054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651
transcript_5729.known	chr1	+	852	8	FSM	ENSG00000134184.13	ENST00000369823.6	852	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.9958320133323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCGTTCCTTTCTCCT	21	False	NA	NA	False	NA	NA	NA	109687828	109693388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109688990_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
transcript_57294.nic	chr2	-	1462	15	NIC	ENSG00000198130.16	novel	2434	14	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	145.818677592049	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTAATGCCTCAT	-10	True	NA	-9	True	AATAAA	-21	NA	190319866	190204634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_190204803_190205099_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_5730.known	chr1	+	1164	8	FSM	ENSG00000134184.13	ENST00000309851.10	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	25.0199920063936	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	9	True	NA	NA	False	AGTAAA	-13	NA	109687816	109693745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
transcript_57300.known	chr2	-	2434	14	FSM	ENSG00000198130.16	ENST00000359678.10	2434	14	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	36.0223467788486	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTTCTCCTTCATCCC	0	True	NA	NA	False	AATAAA	-16	NA	190319826	190203919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_57309.known	chr2	-	2463	13	FSM	ENSG00000198130.16	ENST00000392332.7	2463	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	156.314764355628	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTTTCTCCTTCATCC	968	False	NA	NA	False	AATAAA	-15	NA	190319890	190203920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190205233_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_57326.known	chr2	+	1919	6	FSM	ENSG00000151689.13	ENST00000322522.8	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.9496835316263	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	-52	True	NA	NA	False	AATAAA	-14	NA	190343569	190371665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_190343962_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_57327.known	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.26782687642637	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	2	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
transcript_57333.known	chr2	-	4116	25	FSM	ENSG00000115415.20	ENST00000361099.8	4116	25	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	22.8846367072371	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGGTTTAGCTGTCA	9	True	NA	-6	True	ATTAAA	-17	NA	191014171	190969148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_57336.known	chr2	-	2723	24	FSM	ENSG00000115415.20	ENST00000392323.6	2723	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	70.7434460616708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCCAA	-17	True	NA	-108	True	NA	NA	NA	191014197	190975641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191010366_191010450_191013524_191013679_191014017
transcript_57337.known	chr2	-	2716	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_10	23.7091972250823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	12	True	NA	-3	True	AATAAA	-17	NA	191014168	190975536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_57339.known	chr2	-	3937	25	FSM	ENSG00000115415.20	ENST00000673942.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.9821117611092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATATAATATGCACAC	19	True	NA	-50	True	ATTAAA	-20	NA	191014161	190969311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986942_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_57340.known	chr2	+	4475	15	FSM	ENSG00000115419.13	ENST00000338435.8	4475	15	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	37.358167153398	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTTTTTTTGTTT	14	False	NA	16	True	AATAAA	-16	NA	190880833	190935289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190921023_190921057_190921144_190921204_190923916_190923984_190924542_190924594_190927305_190927483_190930436_190930569_190931544_190931638_190932715
transcript_57342.known	chr2	-	2560	24	FSM	ENSG00000138378.19	ENST00000392320.7	2560	24	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_11	5.2932885422658	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTGCCTGTGTTTGGT	2	True	NA	-10	True	AAGAAA	-30	NA	191150994	191029575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_191029867_191030971_191031081_191031449_191031517_191032957_191033150_191033489_191033627_191033910_191034006_191034547_191034598_191036163_191036300_191039198_191039298_191041064_191041149_191054489_191054535_191058017_191058112_191058201_191058220_191058709_191058770_191061728_191061822_191062761_191062921_191064806_191064959_191066429_191066516_191069692_191069772_191073097_191073191_191076226_191076326_191146612_191146758_191148075_191148205_191150946
transcript_57344.known	chr2	+	1914	7	FSM	ENSG00000173559.15	ENST00000307834.9	1914	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.92751507455695	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGTAATTTTTGCCCTT	-9	True	NA	7	True	AATAAA	-22	NA	191678126	191686939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191682491_191682596_191683728_191683805_191684229_191684297_191685598
transcript_57345.known	chr2	+	11524	6	FSM	ENSG00000173559.15	ENST00000410026.7	11524	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.57904423581089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTTTGCTTTTATTT	0	True	NA	NA	False	AATAAA	-14	NA	191678135	191696662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_57346.known	chr2	+	2269	6	FSM	ENSG00000173559.15	ENST00000425611.9	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.3081318457076	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTTTTGCCCTTTCAA	0	True	NA	11	True	AATAAA	-26	NA	191678135	191686943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_57347.known	chr2	-	2799	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_5	7.4103697780147	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGCGTGGACTTTA	-10	True	NA	NA	False	AATAAA	-22	NA	192194933	191949045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_5735.known	chr1	+	1159	7	FSM	ENSG00000168765.18	ENST00000495742.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	53.5371107011036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	97	False	NA	13	True	AATAAA	-13	NA	109656251	109661700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_57351.known	chr2	+	1852	2	FSM	ENSG00000286358.1	ENST00000652985.1	1852	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAACATAAATTTTTAT	6433	False	NA	NA	False	NA	NA	NA	193170703	193172765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_193170803_193171012
transcript_57355.known	chr2	+	5222	10	FSM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_1	111.426552236035	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	5	True	NA	17	True	AATAAA	-20	NA	195657225	195737700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_57358.nic	chr2	+	1738	5	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	-98	28858	0	2166	5prime_fragment	FALSE	canonical	3	877	junction_1	158.185610913256	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTATTTTTTATTTA	-6	True	NA	NA	False	NA	NA	NA	195657127	195708842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655
transcript_57360.nnic	chr2	+	403	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10320	57	at_least_one_novel_splicesite	FALSE	canonical	3	300	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAAATACTATATTG	-6	True	NA	NA	False	NA	NA	NA	195586296	195680215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_57361.nnic	chr2	+	916	3	NNC	ENSG00000196950.14	novel	2009	6	NA	NA	10320	295	at_least_one_novel_splicesite	FALSE	canonical	3	300	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAGAGGAAGAAAA	-6	True	NA	36	True	AATAAA	-30	NA	195586296	195680728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_57362.nic	chr2	+	338	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	0	57487	0	57	5prime_fragment	FALSE	canonical	3	877	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAAATACTATATTG	-6	True	NA	NA	False	NA	NA	NA	195657127	195680215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_195657282_195680031
transcript_57363.nic	chr2	+	793	2	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	-40	56972	-40	295	5prime_fragment	FALSE	canonical	3	877	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAGAGGAAGAAAA	-35	True	NA	36	True	AATAAA	-30	NA	195657185	195680728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_195657282_195680031
transcript_57364.known	chr2	-	5273	8	FSM	ENSG00000081320.11	ENST00000263955.9	5273	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.80645824036021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCTGAAAACAAGTA	-1	True	NA	NA	False	AATAAA	-17	NA	196171578	196133582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_196137730_196139619_196139800_196141248_196141298_196143559_196143687_196145910_196146056_196156438_196156652_196163261_196163428_196171332
transcript_57365.nic	chr2	-	511	3	ISM	ENSG00000081320.11	ENST00000263955.9	5273	8	-19	22989	-19	0	5prime_fragment	FALSE	canonical	3	27	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGACAGGATTGTCGA	-1	True	NA	20	True	AAAAAG	-5	NA	196171597	196156571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_196156652_196163261_196163428_196171332
transcript_5738.known	chr1	+	1028	7	FSM	ENSG00000134184.13	ENST00000349334.7	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	71.6674418562727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCTGTGTGTCTTGTC	-4	True	NA	NA	False	AGTAAA	-11	NA	109687839	109693743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109693205
transcript_57386.known	chr2	-	4261	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_8	32.8476613799443	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAAGCTGCTCCTTGCT	3	True	NA	NA	False	ATTAAA	-18	NA	196799683	196763034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_57392.known	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_7	19.0455867591419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	27	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_57394.known	chr2	-	3818	19	FSM	ENSG00000119041.11	ENST00000651042.1	3818	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	92.5804454995162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATATACTGTTAGCTTA	-20	True	NA	NA	False	NA	NA	NA	196799706	196763728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196773912_196774141_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_57397.nic	chr2	-	2507	20	NIC	ENSG00000197121.15	novel	11090	27	NA	NA	2	18	combination_of_known_junctions	TRUE	canonical	2	5	junction_12	16.0231826511298	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTACTTTCTACTAG	21	True	NA	NA	False	AAAAAG	-1	NA	196926738	196847457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_57401.known	chr2	-	1622	10	FSM	ENSG00000065413.20	ENST00000409919.5	1622	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.15470053837925	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTATTCAGATTGCTTG	-1	True	NA	NA	False	AATAAA	-20	NA	197310787	197099476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197099931_197110765_197110845_197121331_197121545_197122649_197122793_197125380_197125469_197125836_197126038_197136591_197136663_197147026_197147106_197187022_197187107_197310577
transcript_57403.known	chr2	-	6463	25	FSM	ENSG00000115524.17	ENST00000335508.11	6463	25	0	0	0	0	multi-exon	TRUE	canonical	3	1439	junction_21	202.108018251792	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-1	True	NA	-20	True	AATAAA	-17	NA	197435028	197389783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_57404.known	chr2	-	8308	24	FSM	ENSG00000115524.17	ENST00000470268.2	8308	24	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	433.163136078622	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAAAGTCTTAGTAGAC	-17	True	NA	-28	True	AATAAA	-9	NA	197435044	197389791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197392462_197392971_197393187_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197420543_197421028_197421134_197423807_197423975_197434971
transcript_5741.known	chr1	+	790	6	FSM	ENSG00000134184.13	ENST00000369819.2	790	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	78.1035210473894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGCTCAGCCCCGAGCT	14	False	NA	NA	False	TTTAAA	-23	NA	109687857	109693619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109693205
transcript_57411.nic	chr2	-	1621	11	ISM	ENSG00000115524.17	ENST00000335508.11	6463	25	-113	15352	-62	2800	5prime_fragment	FALSE	canonical	3	1439	junction_7	231.149215875806	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAAATAATGAAGTT	NA	False	NA	NA	False	NA	NA	NA	197435141	197405135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_57416.nic	chr2	-	3367	10	ISM	ENSG00000115524.17	ENST00000470268.2	8308	24	-4	15344	-1	2800	5prime_fragment	FALSE	canonical	3	1632	junction_1	196.965372653904	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAAATAATGAAGTT	-21	True	NA	NA	False	NA	NA	NA	197435048	197405135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197420543_197421028_197421134_197423807_197423975_197434971
transcript_57421.known	chr2	-	651	5	FSM	ENSG00000115524.17	ENST00000414963.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	901.534629118594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	197435079	197418795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_57422.known	chr2	+	2239	5	FSM	ENSG00000115520.9	ENST00000263960.7	2112	5	-129	2	-70	-2	multi-exon	FALSE	canonical	3	273	junction_4	43.9658958739612	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATCTCCTGTCCTCCT	2246	False	NA	NA	False	AATATA	-29	NA	197453422	197475308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197453665_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_57426.known	chr2	-	2245	12	FSM	ENSG00000144381.18	ENST00000388968.8	2245	12	0	0	0	0	multi-exon	FALSE	canonical	1	2687	junction_7	1687.50053810827	2873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	0	True	NA	NA	False	AATAAA	-18	NA	197499840	197486583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_57427.known	chr2	-	2407	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	0	0	0	multi-exon	FALSE	canonical	1	235	junction_11	2610.58026860753	2188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	2874	False	NA	NA	False	AATAAA	-16	NA	197500221	197486585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
transcript_57428.known	chr2	-	2299	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	0	0	0	multi-exon	FALSE	canonical	1	186	junction_11	2621.74102458652	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	2821	False	NA	NA	False	AATAAA	-16	NA	197500274	197486585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
transcript_57434.known	chr2	+	890	9	FSM	ENSG00000270757.1	ENST00000604458.1	890	9	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	3750.92981805845	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATATTATAGCTTCTTT	9	False	NA	NA	False	NA	NA	NA	197500412	197550726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197501073_197501239_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_57436.known	chr2	-	2022	9	FSM	ENSG00000144381.18	ENST00000678170.1	2022	9	0	0	0	0	multi-exon	FALSE	canonical	2	272	junction_6	2648.25881476868	1994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	3203	False	NA	NA	False	AATAAA	-16	NA	197499892	197486585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197497139_197497393_197498674_197498851_197499781
transcript_57445.known	chr2	+	3752	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_7	137.169193899731	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAAGCATCTCATTG	1	True	NA	22	True	AGTAAA	-16	NA	197516065	197553699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_57447.known	chr2	+	1447	8	FSM	ENSG00000115540.15	ENST00000409360.1	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	480.542508047744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTACATACAGGATGATC	95	False	NA	NA	False	CATAAA	-44	NA	197516159	197551279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516356_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_57453.known	chr2	+	1198	7	FSM	ENSG00000115540.15	ENST00000417097.5	1198	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	512.976607653799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTACCGTTCTGCAACA	9	True	NA	NA	False	CATAAA	-19	NA	197516073	197551254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516147_197523623_197523687_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_57455.known	chr2	+	1021	7	FSM	ENSG00000115540.15	ENST00000448447.6	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	441.517710730712	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTAGAAATGTTTTCTA	-18	True	NA	124	True	NA	NA	NA	197516046	197551012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197516147_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_57466.known	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	238.481771956591	9523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	-3	True	NA	18	True	AATAAA	-14	NA	197500378	197503449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
transcript_57472.known	chr2	+	570	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	284.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	-3	True	NA	45	True	AATAAA	-19	NA	197500378	197503382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197501073_197501239_197503038
transcript_57475.known	chr2	+	478	3	FSM	ENSG00000115541.11	ENST00000409729.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	1094	junction_1	5864.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCACTGAAGTTCTG	154	False	NA	-41	True	NA	NA	NA	197500139	197503296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197503038_197503129_197503208
transcript_57477.known	chr2	+	569	2	FSM	ENSG00000115541.11	ENST00000473395.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGTTCAAGACCAGCCT	-5	True	NA	NA	False	NA	NA	NA	197500348	197501551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197500440_197501073
transcript_57479.known	chr2	-	2312	12	FSM	ENSG00000144381.18	ENST00000426480.2	2312	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2664.35871371929	2041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	197516737	197486585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197516609
transcript_57481.nnic	chr2	+	759	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGGTAGTCT	NA	False	NA	8	True	ATTAAA	-18	NA	197578670	197587684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_+_197578923_197580468_197580643_197587351
transcript_57483.known	chr2	+	3027	1	FSM	ENSG00000247626.5	ENST00000282276.8	3027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATCTGTTCTGTTGCA	-19	True	NA	13	True	ATTAAA	-25	NA	197705368	197708395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_197705400_197708400
transcript_57484.known	chr2	+	1663	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGGTTTCGTTTT	-18	True	NA	6	True	AATAAA	-20	NA	199459759	199461422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199459800_199461400
transcript_57487.known	chr2	-	5123	8	FSM	ENSG00000162971.11	ENST00000354611.9	5123	8	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_6	29.1932337701595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGGGACTTTGTATTG	1	True	NA	-1	True	ATTAAA	-15	NA	199955491	199928912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948317_199948473_199955392
transcript_57488.known	chr2	-	4287	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	18.8960637300417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTATATGCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	199955736	199929974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_5749.known	chr1	-	4046	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	7.8141681892442	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCCATGTGCCTAATTT	547	False	NA	NA	False	AATAAA	-25	NA	109740516	109733931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
transcript_57499.known	chr2	-	2042	7	FSM	ENSG00000162971.11	ENST00000441832.1	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	42.687494916219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGAGCCATTGTGTGT	-11	True	NA	-11	True	AATAAA	-28	NA	199955503	199931898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_199933324_199935930_199936048_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_57504.known	chr2	+	1495	6	FSM	ENSG00000162972.11	ENST00000295079.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	122.236492096264	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTACTTACAAATTT	NA	False	NA	0	True	AATAAA	-11	NA	199955316	199964108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199955337_199955496_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_57515.known	chr2	+	3691	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	-34	True	NA	17	True	ATTAAA	-18	NA	199911292	199928273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199911772_199925061
transcript_57516.known	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	289	junction_2	15.9608896995124	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	32	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_57518.known	chr2	+	2250	14	FSM	ENSG00000196141.14	ENST00000451764.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	484.850101889002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGTGTCAATCAGAAT	31	False	NA	-84	True	NA	NA	NA	200306375	200478102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306602_200308886_200309091_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_57521.known	chr2	+	2648	13	FSM	ENSG00000196141.14	ENST00000409718.5	2648	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	414.511660471291	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	8	True	NA	19	True	ATTAAA	-16	NA	200305892	200478530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_57524.known	chr2	+	2698	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	383.716221821399	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	94	False	NA	18	True	ATTAAA	-15	NA	200306150	200478529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_57528.known	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_7	295.837652550629	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	-5	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_5753.known	chr1	+	3943	17	FSM	ENSG00000168710.18	ENST00000369799.10	3943	17	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	34.6968455878917	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGTCCGTATGTGTCA	-38	True	NA	33	True	ATTAAA	-25	NA	109984764	110023742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_109985173_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_57535.known	chr2	+	2119	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	313.609300545168	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	-1	True	NA	19	True	ATTAAA	-16	NA	200306523	200478530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_57537.nic	chr2	+	2113	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	864	junction_6	145.847593950524	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	28	False	NA	19	True	ATTAAA	-16	NA	200306850	200478530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_5754.known	chr1	+	2503	17	FSM	ENSG00000168710.18	ENST00000359172.3	2503	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	201.30076999356	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAATTAAGGAGA	23	True	NA	NA	False	NA	NA	NA	110004130	110022389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110004452_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_57545.nic	chr2	+	713	5	ISM	ENSG00000196141.14	ENST00000409988.7	2698	13	8	62101	0	-2905	5prime_fragment	FALSE	canonical	3	215	junction_1	460.334117788373	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTAATATTGATTGT	102	False	NA	32	True	AAAAAG	-4	NA	200306158	200416428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378
transcript_57548.known	chr2	+	1730	3	FSM	ENSG00000196141.14	ENST00000471601.5	1730	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCCAG	0	True	NA	NA	False	AATGAA	-39	NA	200306553	200390854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306602_200329430_200329481_200389222
transcript_57549.known	chr2	+	1901	3	FSM	ENSG00000196141.14	ENST00000459656.5	1901	3	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_1	114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGTAGGGCCAGGTG	20	True	NA	NA	False	NA	NA	NA	200306717	200390868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200306923_200329430_200329481_200389222
transcript_57553.known	chr2	+	4478	9	FSM	ENSG00000163535.18	ENST00000357799.9	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	14.4892201308421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATACACAGTTTATTG	40	True	NA	NA	False	AATAAA	-17	NA	200526206	200584096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049_200573978_200575310_200575462_200583448
transcript_5756.known	chr1	+	810	5	FSM	ENSG00000143093.15	ENST00000535003.5	810	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	14.1840579525043	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGGGTAAGTTGGAGGT	8252	False	NA	NA	False	NA	NA	NA	110042873	110046744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679
transcript_57561.nic	chr2	+	1310	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-111	12599	-71	1355	5prime_fragment	FALSE	canonical	3	185	junction_5	6.05530070819498	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGTAATAAAAAAACAA	-5	True	NA	NA	False	ATTAAA	-3	NA	200526095	200571497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_57562.nic	chr2	+	1385	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-111	12524	-71	1430	5prime_fragment	FALSE	canonical	3	185	junction_5	6.05530070819498	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAGATCAAAGAGAC	-5	True	NA	NA	False	AATGAA	-40	NA	200526095	200571572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_57563.nic	chr2	+	1634	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-111	12275	-71	1679	5prime_fragment	FALSE	canonical	3	185	junction_5	6.05530070819498	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAGAATAACAAATG	-5	True	NA	NA	False	AATAAA	-3	NA	200526095	200571821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_57566.known	chr2	-	2939	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	5.02493781056044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-1	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
transcript_57567.known	chr2	-	2556	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	11.1803398874989	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-1	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
transcript_57570.known	chr2	+	4928	35	FSM	ENSG00000138356.14	ENST00000374700.7	4928	35	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_9	10.4401407937052	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGAGTAGATGTATCT	-28	True	NA	7	True	AATAAA	-18	NA	200586013	200671495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200586154_200593145_200593204_200595271_200595369_200597396_200597506_200599619_200599747_200602283_200602346_200603266_200603357_200604016_200604098_200604695_200604841_200605535_200605629_200608983_200609136_200609320_200609415_200611383_200611494_200612608_200612794_200613803_200613967_200615970_200616064_200620649_200620820_200621119_200621247_200623860_200623984_200627352_200627450_200634790_200634916_200636910_200637045_200638214_200638303_200641097_200641185_200642609_200642802_200650973_200651202_200656841_200656938_200659164_200659294_200659994_200660070_200661578_200661632_200662854_200662970_200666686_200666753_200668614_200668804_200669574_200669743_200670628
transcript_57572.nnic	chr2	+	1692	11	NNC	ENSG00000138356.14	novel	580	7	NA	NA	-10837	-73	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	11.0113577727726	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACTGTGAAGTTGTCA	NA	False	NA	10	True	NA	NA	NA	200649199	200671063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_200649338_200650973_200651202_200656841_200656938_200659164_200659294_200659994_200660070_200661578_200661632_200662854_200662970_200666686_200666753_200668614_200668804_200669574_200669743_200670628
transcript_57573.nnic	chr2	+	2124	11	NNC	ENSG00000138356.14	novel	580	7	NA	NA	-10837	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	11.0113577727726	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGAGTAGATGTATCT	NA	False	NA	7	True	AATAAA	-18	NA	200649199	200671495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_200649338_200650973_200651202_200656841_200656938_200659164_200659294_200659994_200660070_200661578_200661632_200662854_200662970_200666686_200666753_200668614_200668804_200669574_200669743_200670628
transcript_57579.nic	chr2	+	3119	12	NIC	ENSG00000082153.18	novel	1075	9	NA	NA	-8	599	combination_of_known_junctions	FALSE	canonical	3	388	junction_1	536.319166107165	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTATACATCAGTCTTT	-29	True	NA	0	True	AATAAA	-18	NA	200811537	200823837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_57584.known	chr2	+	6511	12	FSM	ENSG00000082153.18	ENST00000409600.6	6511	12	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	151.562332048131	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGACTGTTCAGTTGGT	-1	True	NA	24	True	AATAAA	-34	NA	200811909	200827338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200811991_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_57597.known	chr2	+	1075	9	FSM	ENSG00000082153.18	ENST00000410110.6	1075	9	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	599.996653636501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGGTCAAGTGTAATG	-21	True	NA	NA	False	AAAACA	-28	NA	200811545	200818818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754
transcript_5760.known	chr1	+	3214	2	FSM	ENSG00000162775.17	ENST00000654015.1	3214	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	-11	True	NA	24	True	AATAAA	-20	NA	110339424	110346677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110342269_110346307
transcript_57601.known	chr2	-	2026	13	FSM	ENSG00000013441.17	ENST00000434813.3	2026	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	48.9759011033885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATTTTGTTTGGG	126	False	NA	-130	True	NA	NA	NA	200864561	200853195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864100
transcript_57602.known	chr2	-	1847	13	FSM	ENSG00000013441.17	ENST00000321356.9	1847	13	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_9	41.1771241778194	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	-2	True	NA	57	True	ATTAAA	-14	NA	200864658	200853008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864563
transcript_57604.nic	chr2	-	1749	12	NIC	ENSG00000013441.17	novel	2026	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	38.1796536182981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	427	False	NA	-15	True	AATAAA	-18	NA	200864260	200853080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864100
transcript_57605.known	chr2	-	1682	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	22.8686511760438	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	0	True	NA	-15	True	AATAAA	-18	NA	200864656	200853080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
transcript_57608.known	chr2	-	3208	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	18.0986187318259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-4	True	NA	-15	True	AATAAA	-18	NA	200864691	200853080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
transcript_57624.nnic	chr2	-	1073	8	NNC	ENSG00000240344.9	novel	1166	7	NA	NA	3	-53	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	96.2524317212033	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	29	False	NA	-43	True	AATAAA	-21	NA	200889300	200871008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955_200889030_200889243
transcript_5763.known	chr1	-	694	5	FSM	ENSG00000134248.14	ENST00000483260.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	1127.42372247527	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	2	True	NA	-27	True	AATAAA	-21	NA	110407668	110401248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032_110407129_110407585
transcript_57630.known	chr2	-	1166	7	FSM	ENSG00000240344.9	ENST00000392283.9	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	37.8700262594164	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-14	True	NA	59	True	AATGAA	-18	NA	200889077	200870906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
transcript_57631.nic	chr2	-	1038	7	NIC	ENSG00000240344.9	novel	1166	7	NA	NA	-36	-53	combination_of_known_junctions	FALSE	canonical	3	64	junction_6	82.8264584672206	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	NA	False	NA	-43	True	AATAAA	-21	NA	200889339	200871008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200889243
transcript_57633.known	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	119.959368121043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	8	True	NA	59	True	AATGAA	-18	NA	200889269	200870906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
transcript_57634.known	chr2	-	756	7	FSM	ENSG00000240344.9	ENST00000409449.5	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	128.279209365959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTACCAAGGGGCGCCC	26	False	NA	NA	False	NA	NA	NA	200889303	200871266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200889243
transcript_57635.known	chr2	-	1222	6	FSM	ENSG00000240344.9	ENST00000465823.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	99.6505895617281	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAAGGTATATATGA	1	True	NA	10	True	ATTAAA	-28	NA	200889276	200870955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200888955
transcript_57636.nic	chr2	-	944	6	NIC	ENSG00000240344.9	novel	756	7	NA	NA	-36	-53	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	119.802170264148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	NA	False	NA	-43	True	AATAAA	-21	NA	200889339	200871008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200889243
transcript_57643.known	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	188.746563693548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	-14	True	NA	-7	True	ATTAAA	-27	NA	200889414	200903896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_57646.nnic	chr2	+	1460	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	144.215887551345	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	-32	True	NA	22	True	AATAAA	-15	NA	200889338	200903925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200889392_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_57647.nic	chr2	+	1443	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	142.458668469919	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	NA	False	NA	22	True	AATAAA	-15	NA	200889304	200903925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_57651.known	chr2	+	1689	7	FSM	ENSG00000196290.17	ENST00000409020.6	1689	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	128.854784760037	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	0	True	NA	22	True	AATAAA	-15	NA	200889370	200903925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200889653_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_57653.known	chr2	+	1626	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	136.854444169303	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	17	True	NA	27	True	AATAAA	-20	NA	200889387	200903930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_57654.nnic	chr2	+	1864	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	14	junction_1	155.875395392887	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	7	True	NA	22	True	AATAAA	-15	NA	200889377	200903925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_200889653_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_5766.known	chr1	-	1154	4	FSM	ENSG00000134248.14	ENST00000474861.6	1154	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	1050.92477794031	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-1	True	NA	-27	True	AATAAA	-21	NA	110407671	110401248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032
transcript_5767.known	chr1	-	620	4	FSM	ENSG00000134248.14	ENST00000602318.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_3	108.81891175506	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTTCTAGATTCTT	-24	True	NA	-31	True	AATAAA	-17	NA	110407694	110401252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407585
transcript_57673.known	chr2	-	4288	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	23.047115875376	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTAGTGCTGGTTT	1	True	NA	NA	False	AATAAA	-31	NA	200963660	200908976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_57690.known	chr2	-	9333	12	FSM	ENSG00000155744.10	ENST00000418596.7	9333	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	12.6301488968668	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGTTGATTTTAT	-20	True	NA	0	True	TATAAA	-30	NA	201071669	200973717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_200981872_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
transcript_57696.known	chr2	+	503	4	FSM	ENSG00000119013.10	ENST00000433898.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	873.486500563498	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	2	True	NA	23	True	ATTAAA	-12	NA	201072007	201085744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201072338_201072362_201078880_201079023_201085458
transcript_57697.known	chr2	+	547	4	FSM	ENSG00000119013.10	ENST00000454214.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	863.960390038545	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	24	False	NA	29	True	ATTAAA	-18	NA	201072029	201085750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201072278_201072362_201078880_201079023_201085458
transcript_57698.known	chr2	+	555	4	FSM	ENSG00000119013.10	ENST00000684175.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	863.812608279262	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	16	True	NA	29	True	ATTAAA	-18	NA	201072021	201085750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201073070_201073154_201078880_201079023_201085458
transcript_5770.known	chr1	+	817	3	FSM	ENSG00000224699.10	ENST00000457535.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	116	False	NA	4	True	TATAAA	-29	NA	110407524	110416274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_110407955_110412172_110412294_110416008
transcript_57702.known	chr2	+	564	3	FSM	ENSG00000119013.10	ENST00000450023.6	564	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	957.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAATACCTGGAAGCATC	7506	False	NA	NA	False	AATAAA	-19	NA	201071432	201085615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201071698_201078880_201079023_201085458
transcript_57703.known	chr2	+	493	3	FSM	ENSG00000119013.10	ENST00000237889.9	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	1477	junction_1	219	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	-5	True	NA	29	True	ATTAAA	-18	NA	201072000	201085750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072060_201078880_201079023_201085458
transcript_57704.known	chr2	+	1548	3	FSM	ENSG00000119013.10	ENST00000682325.1	1548	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGCCAATCTG	18	True	NA	13	True	ATTAAA	-2	NA	201072023	201085734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201073154_201078880_201079023_201085458
transcript_57705.known	chr2	+	739	3	FSM	ENSG00000119013.10	ENST00000684420.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	901	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATCTGCTTTTGTCATT	46	False	NA	24	True	ATTAAA	-13	NA	201072051	201085745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201072362_201078880_201079023_201085458
transcript_5771.known	chr1	-	2567	9	FSM	ENSG00000168679.18	ENST00000369779.9	2567	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.43669858620224	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAACTTCTTTATTT	-13	True	NA	NA	False	AATAAA	-17	NA	110391026	110362856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110363894_110375457_110375552_110376949_110377162_110378852_110379357_110380981_110381144_110381651_110381796_110382833_110382967_110389236_110389356_110390864
transcript_57713.known	chr2	+	2128	10	FSM	ENSG00000003402.21	ENST00000423241.6	2128	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	40.9184675623895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	915	False	NA	1	True	AGTAAA	-6	NA	201118490	201164110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_57714.nnic	chr2	+	2147	10	NNC	ENSG00000003402.21	novel	1868	9	NA	NA	3053	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.6229400187261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGACAG	1088	False	NA	NA	False	AATATA	-20	NA	201125529	201164279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_201125791_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_57716.known	chr2	+	1868	9	FSM	ENSG00000003402.21	ENST00000457277.5	1868	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	38.5468464987734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCATCCCCATTTGCAT	12	False	NA	NA	False	NA	NA	NA	201129865	201163559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201162995
transcript_5772.known	chr1	-	3313	4	FSM	ENSG00000121931.16	ENST00000369763.5	3313	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	15.4560308258262	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-9	True	NA	-16	True	NA	NA	NA	110963922	110947189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110948400_110949850_110950124_110951287_110952816_110963620
transcript_57721.known	chr2	+	1283	6	FSM	ENSG00000003402.21	ENST00000341222.10	1283	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	45.9190592238125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	-6	True	NA	21	True	AATAAA	-17	NA	201116166	201141598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_57722.nic	chr2	+	1182	6	NIC	ENSG00000003402.21	novel	2128	10	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	44.2962752384441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	7	True	NA	21	True	AATAAA	-17	NA	201118687	201141598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_57725.nic	chr2	+	1165	6	NIC	ENSG00000003402.21	novel	1198	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	34.5913283931103	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	-10	True	NA	21	True	AATAAA	-17	NA	201129323	201141598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_201129521_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_57726.nnic	chr2	+	2161	5	NNC	ENSG00000003402.21	novel	1198	5	NA	NA	3053	-2	intron_retention	FALSE	canonical	1	2	junction_1	48.8588528313959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCATTTGTTTTTTTA	1088	False	NA	19	True	AATAAA	-15	NA	201125529	201141596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_201125791_201129728_201130147_201133028_201133135_201135971_201136108_201140356
transcript_57729.known	chr2	+	1198	5	FSM	ENSG00000003402.21	ENST00000440180.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	29.4703240565828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTTTTTTACTGAGC	14	False	NA	25	True	AATAAA	-21	NA	201129502	201141602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_57732.nic	chr2	+	2097	5	NIC	ENSG00000003402.21	novel	1198	5	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	40	junction_1	33.0936172093653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCATTTGTTTTTTTA	-10	True	NA	19	True	AATAAA	-15	NA	201129323	201141596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_201129521_201129728_201130147_201133028_201133135_201135971_201136108_201140356
transcript_57733.known	chr2	+	830	4	FSM	ENSG00000003402.21	ENST00000461820.5	830	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	51.1924473596122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCAACTCCATTGCCC	86	False	NA	NA	False	NA	NA	NA	201129642	201136281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201136197
transcript_57734.known	chr2	+	717	4	FSM	ENSG00000003402.21	ENST00000461422.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	13.2748718344933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATTCCACTATCCAAAG	40	False	NA	-10	True	AATAAA	-5	NA	201129976	201140661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356
transcript_57737.known	chr2	+	1294	7	FSM	ENSG00000003400.15	ENST00000460140.5	1294	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	11.7011395456454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGGTAGTTTCTTTTCT	0	True	NA	NA	False	NA	NA	NA	201183111	201206250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201203729_201203767_201205881
transcript_57738.known	chr2	+	1126	6	FSM	ENSG00000003400.15	ENST00000374650.7	1126	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	9.8264947972306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCTTGCTGTGAGTTT	22	False	NA	16	True	ATTAAA	-18	NA	201183159	201200728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201200442
transcript_57740.known	chr2	+	2911	3	FSM	ENSG00000064012.23	ENST00000490682.5	2911	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACATGGATGAATCTTG	-1	True	NA	NA	False	TATAAA	-23	NA	201233464	201242925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201233623_201234015_201234113_201240269
transcript_57741.nic	chr2	+	1960	3	NIC	ENSG00000064012.23	novel	2911	3	NA	NA	-1	-886	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTCTCAACATCATCAA	-4	True	NA	NA	False	ATTAAA	-23	NA	201233461	201242039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_201233555_201234015_201234113_201240269
transcript_57742.known	chr2	-	6389	16	FSM	ENSG00000115993.13	ENST00000332624.8	6389	16	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_13	7.25901738070197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCCTGTGTCTTTG	22	True	NA	0	True	AATAAA	-22	NA	201451458	201377206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201381219_201384110_201384217_201386217_201386485_201387702_201388002_201389299_201389504_201389800_201389881_201392908_201393047_201394797_201394873_201395313_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_57744.known	chr2	+	2222	12	FSM	ENSG00000082146.13	ENST00000194530.8	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	27.1831863444062	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	0	True	NA	27	True	AATAAA	-16	NA	201451739	201480846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478356_201478602_201479488_201479532_201480031
transcript_57746.nic	chr2	-	1432	10	ISM	ENSG00000115993.13	ENST00000332624.8	6389	16	-92	15783	-50	2138	5prime_fragment	FALSE	canonical	3	25	junction_7	8.16496580927726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATAAAGGAACTTCG	11	True	NA	NA	False	NA	NA	NA	201451550	201392989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_201393047_201394797_201394873_201395313_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_57747.known	chr2	-	1436	8	FSM	ENSG00000115993.13	ENST00000430254.1	1436	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	8.06605383628177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTCTTTGTAAAATG	-20	True	NA	NA	False	AATAAA	-14	NA	201451500	201395127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_57751.nic	chr2	-	1862	14	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	189.970505340719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTGAAAGATGCTCTACA	1467	False	201642713	29	True	AATATA	-5	NA	201642696	201623755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201634803_201634894_201636747_201636886_201638988_201639046_201640260_201640266_201640892_201640925_201642608
transcript_57753.known	chr2	-	5592	13	FSM	ENSG00000155755.20	ENST00000409444.6	5592	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	153.737036490525	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTCTGTTTGCATTT	1219	False	NA	-2	True	AATAAA	-20	NA	201642944	201620183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640260_201640266_201640892_201640925_201642608
transcript_5776.known	chr1	-	1796	3	FSM	ENSG00000121931.16	ENST00000485275.2	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	17.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAATATTTCTTAAAC	-10	True	NA	-48	True	AAAAAG	-20	NA	110963965	110947221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_110948400_110949850_110950124_110963620
transcript_57768.known	chr2	-	6675	34	FSM	ENSG00000003393.16	ENST00000264276.11	6675	34	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_10	25.1097864867559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCGTTATTTTTTTTC	-4	True	NA	NA	False	AATAAA	-16	NA	201780933	201700266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_57769.known	chr2	-	3148	13	FSM	ENSG00000003393.16	ENST00000482789.6	3148	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	24.4692267053039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCATTTTATGAAACT	NA	False	NA	-23	True	AATAAA	-2	NA	201781158	201733049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_57770.known	chr2	-	5086	5	FSM	ENSG00000003393.16	ENST00000681378.1	5086	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	28.3989436423259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGGAGAATCGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	201781158	201754128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_57771.known	chr2	-	2677	4	FSM	ENSG00000003393.16	ENST00000467448.5	2677	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	15.9234278833282	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTGTGTTTCTATTA	-27	True	NA	NA	False	ATTAAA	-16	NA	201780956	201759456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_201761819_201767228_201767384_201768865_201768946_201780876
transcript_57773.known	chr2	-	768	1	FSM	ENSG00000273209.1	ENST00000608741.1	768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGGGTTATCCTCGTT	3231	False	NA	-26	True	ATTAAA	-16	NA	202033537	202032769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202032800_202033500
transcript_57778.known	chr2	-	831	4	FSM	ENSG00000116030.17	ENST00000392244.7	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_3	1651.10717062488	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGGTTGAAGTCAAGA	15	True	NA	NA	False	TTTAAA	-30	NA	202238566	202206767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202238439
transcript_57807.known	chr2	+	1994	15	FSM	ENSG00000055044.11	ENST00000264279.10	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_3	123.226624640977	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTGTGATCTCTTT	12	True	NA	18	True	AATAAA	-19	NA	202265762	202303661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920_202303058_202303385
transcript_57820.nic	chr2	+	1651	14	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-41	712	-14	-484	5prime_fragment	FALSE	canonical	3	1028	junction_3	113.053791459259	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAACATCTGT	-29	True	NA	27	True	AAAAAG	-6	NA	202265721	202302949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920
transcript_57821.nic	chr2	+	1784	14	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-66	604	-39	-376	5prime_fragment	FALSE	canonical	3	1028	junction_3	113.053791459259	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTTTTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	202265696	202303057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920
transcript_57835.nic	chr2	+	1619	13	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-38	3294	-11	2461	5prime_fragment	FALSE	canonical	3	1028	junction_3	105.024864780785	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTTTGAATTTTTTTTT	-26	True	NA	NA	False	ATTAAA	-8	NA	202265724	202300367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233
transcript_5784.known	chr1	-	2098	10	FSM	ENSG00000156171.15	ENST00000484310.6	2098	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	41.5392124725482	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGCATCTACAAAAACAGT	-5	True	NA	-11	True	ATTAAA	-24	NA	111140093	111117162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_57844.nic	chr2	+	1948	12	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-501	5755	-474	0	5prime_fragment	FALSE	canonical	3	1028	junction_3	99.5455790783779	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACATTTAAGTGAGG	NA	False	NA	NA	False	AAAACA	-21	NA	202265261	202297906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844
transcript_5785.nic	chr1	-	2044	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_9	56.334319517995	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-5	True	NA	-8	True	AATAAA	-13	NA	111140164	111117332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_57862.known	chr2	-	694	2	FSM	ENSG00000163596.17	ENST00000476602.1	694	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTCATTATACATT	NA	False	NA	NA	False	AATAAA	-23	NA	202821756	202819604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202819900_202821357
transcript_57864.known	chr2	-	8068	13	FSM	ENSG00000138442.11	ENST00000261015.5	8068	13	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_3	50.403924009501	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTTAAAGGTGTTAAAT	-13	True	NA	NA	False	AGTAAA	-25	NA	202911673	202874260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_57870.nic	chr2	-	1421	8	ISM	ENSG00000138442.11	ENST00000688520.1	8621	13	32	18394	32	3343	5prime_fragment	FALSE	canonical	3	563	junction_6	33.6906696948843	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAACAGAAGACAGAA	-21	True	NA	NA	False	NA	NA	NA	202912194	202892654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_57871.nic	chr2	-	1869	6	ISM	ENSG00000138442.11	ENST00000688520.1	8621	13	32	21262	32	475	5prime_fragment	FALSE	canonical	3	563	junction_4	39.3974618471799	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAATGAAGTA	-21	True	NA	NA	False	NA	NA	NA	202912194	202895522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_57872.nic	chr2	-	1697	6	ISM	ENSG00000138442.11	ENST00000688520.1	8621	13	32	21434	32	303	5prime_fragment	FALSE	canonical	3	563	junction_4	39.3974618471799	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAGCCGGGCATGGT	-21	True	NA	NA	False	ACTAAA	-13	NA	202912194	202895694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_57877.nic	chr2	+	749	5	ISM	ENSG00000144426.19	ENST00000478884.5	1012	7	-79	5984	-20	0	5prime_fragment	FALSE	canonical	2	9	junction_2	3.03108891324554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAGGTGTGAACTAAT	-21	True	NA	1	True	NA	NA	NA	203014845	203056504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426
transcript_57880.known	chr2	+	521	3	FSM	ENSG00000144426.19	ENST00000683927.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTGCTTTTCATTTT	12	True	NA	NA	False	AATAAA	-13	NA	203014878	203016735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203014983_203016155_203016436_203016598
transcript_57881.known	chr2	+	10552	13	FSM	ENSG00000119004.17	ENST00000356079.9	10552	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	32.7706677787723	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTCATTTGTTCCT	-5	True	NA	15	True	AATATA	-35	NA	203239017	203306026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57885.known	chr2	+	1730	12	FSM	ENSG00000119004.17	ENST00000449301.5	1730	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	50.6941892769406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGAATCATGTTTGTT	-10	True	NA	17	True	AAAAAG	-17	NA	203238976	203297242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57886.known	chr2	+	2636	12	FSM	ENSG00000119004.17	ENST00000431118.5	2636	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.148015586924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGGGAGGATCACTT	4	True	NA	NA	False	NA	NA	NA	203239026	203298286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57895.known	chr2	+	1359	11	FSM	ENSG00000119004.17	ENST00000461371.5	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	42.9855789771407	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	-5	True	NA	4	True	TATAAA	-24	NA	203238981	203297014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_579.known	chr1	+	456	2	FSM	ENSG00000230679.1	ENST00000442636.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTACTTGAATTTAA	171	False	NA	NA	False	ACTAAA	-39	NA	8878834	8879894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_8878961_8879564
transcript_57905.known	chr2	+	1812	13	FSM	ENSG00000119004.17	ENST00000429815.6	1812	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	52.8994722720999	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGCAGAAGTTG	-5	True	NA	1	True	AAAAAG	-1	NA	203238981	203297226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272645_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_57907.known	chr2	+	6567	12	FSM	ENSG00000138443.17	ENST00000261018.12	6567	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	200.62316140606	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	2	True	NA	15	True	AATAAA	-16	NA	203328393	203432169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203382188_203382207_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_57909.nnic	chr2	+	1663	11	NNC	ENSG00000138443.17	novel	6484	10	NA	NA	18	29	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_10	159.371547021418	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAAGGTATAACAGCAT	9	True	NA	21	True	AATAAA	-18	NA	203328299	203427598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176_203427270_203427495
transcript_57915.known	chr2	+	6484	10	FSM	ENSG00000138443.17	ENST00000261017.9	6484	10	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_8	120.580488973082	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	-11	True	NA	19	True	AATAAA	-20	NA	203328279	203432173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_57917.nnic	chr2	+	1482	10	NNC	ENSG00000138443.17	novel	22039	11	NA	NA	0	29	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_9	163.634416374497	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAAGGTATAACAGCAT	2	True	NA	21	True	AATAAA	-18	NA	203328393	203427598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176_203427270_203427495
transcript_57919.nic	chr2	+	1732	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	205	junction_7	115.274400887621	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	9	True	NA	-49	True	ATTAAA	-27	NA	203328299	203427528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_57920.nic	chr2	+	1773	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	205	junction_7	115.274400887621	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	9	True	NA	-8	True	NA	NA	NA	203328299	203427569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_57932.known	chr2	+	1072	2	FSM	ENSG00000118257.17	ENST00000478013.1	1072	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTATGGTGGAAAGAGCC	158	False	NA	16	True	AATAAA	-16	NA	205682657	205697909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_205683364_205697543
transcript_57936.nic	chr2	-	2170	9	ISM	ENSG00000114933.16	ENST00000403263.6	14128	11	-141	15984	-12	0	5prime_fragment	FALSE	canonical	3	7	junction_8	5.09288719686584	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACACAAGAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	206086315	206009704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206063046_206063150_206063245_206085900
transcript_57938.nic	chr2	-	802	4	ISM	ENSG00000114933.16	ENST00000403263.6	14128	11	-141	63177	-12	6008	5prime_fragment	FALSE	canonical	3	7	junction_3	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGGAAGAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	206086315	206056897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_206056944_206062798_206063046_206063150_206063245_206085900
transcript_57939.known	chr2	+	752	2	FSM	ENSG00000227946.2	ENST00000420509.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTAATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	206084604	206086564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206084749_206085956
transcript_57940.known	chr2	-	14128	11	FSM	ENSG00000114933.16	ENST00000403263.6	14128	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	5.01597448159378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTTTTAGTTTAATT	-34	True	NA	-6	True	AATAAA	-16	NA	206086174	205993720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206005534_206007283_206007442_206009576_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206063046_206063150_206063245_206085900
transcript_57941.known	chr2	-	2371	19	FSM	ENSG00000023228.14	ENST00000449699.5	2371	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	101.751042704033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATAATT	324	False	NA	-43	True	NA	NA	NA	206159194	206124100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159095
transcript_57944.known	chr2	-	2171	15	FSM	ENSG00000023228.14	ENST00000457011.5	2171	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	112.83073832163	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTTGTGACGAACATAA	15	True	NA	-50	True	NA	NA	NA	206159425	206123944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206159340
transcript_57945.known	chr2	-	11660	19	FSM	ENSG00000023228.14	ENST00000233190.11	11660	19	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_5	38.0975437463647	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGGATCAATTAACATG	-4	True	NA	-31	True	AATAAA	-17	NA	206159444	206114816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159340
transcript_5795.nic	chr1	-	1470	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	39	217	combination_of_known_junctions	FALSE	canonical	3	74	junction_9	56.334319517995	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAGTTTTTTATACCT	-5	True	NA	-21	True	AATAAA	-16	NA	111140164	111117906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_57950.known	chr2	+	912	8	FSM	ENSG00000114942.14	ENST00000429769.5	912	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	1806.99778073794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATATGCTGGAGGAGC	10	True	NA	-93	True	GATAAA	-6	NA	206159635	206162801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206160886_206161133_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57951.known	chr2	+	880	7	FSM	ENSG00000114942.14	ENST00000392221.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	1300.95752129815	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	-32	True	NA	33	True	AATAAA	-14	NA	206159593	206162927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57953.known	chr2	+	844	7	FSM	ENSG00000114942.14	ENST00000236957.9	844	7	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	1129.30106211271	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	-41	True	NA	34	True	AATAAA	-15	NA	206159584	206162928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57958.known	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3535	junction_2	182.164101842267	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	-5	True	NA	34	True	AATAAA	-15	NA	206159894	206162928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_57959.known	chr2	-	756	3	FSM	ENSG00000183671.13	ENST00000451790.5	756	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTCAATAATCATACT	4446	False	NA	NA	False	NA	NA	NA	206213625	206176712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206177276_206213306_206213422_206213547
transcript_57960.known	chr2	-	1795	12	FSM	ENSG00000138400.13	ENST00000454776.6	1795	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.61768314629387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTATTTTGGTGTCAAA	3	True	NA	NA	False	NA	NA	NA	206765286	206738256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206738512_206739592_206739659_206741053_206741105_206745621_206745674_206746286_206746427_206749019_206749184_206750933_206751076_206755008_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_57961.known	chr2	-	1757	11	FSM	ENSG00000138400.13	ENST00000449792.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.48587060943071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACATTAAAATAGAGTT	-3	True	NA	NA	False	NA	NA	NA	206765326	206738224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206738512_206739592_206739662_206741053_206741105_206745621_206745674_206746286_206746427_206749019_206749184_206750933_206751076_206755008_206755506_206756897_206757041_206757236_206757372_206765249
transcript_57975.nic	chr2	-	1080	4	ISM	ENSG00000138400.13	ENST00000449792.5	1757	11	9	16547	9	1847	5prime_fragment	FALSE	canonical	3	7	junction_3	9.67241208569794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTATTCAGGTGATA	6	True	NA	-17	True	AATAAA	-18	NA	206765317	206754771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206765249
transcript_57977.known	chr2	-	722	4	FSM	ENSG00000138400.13	ENST00000471988.1	722	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	6.97614984548545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGACTGTTGCTCTCT	-12	True	NA	NA	False	AAAACA	-35	NA	206765301	206756618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_206757041_206757236_206757372_206760900_206761014_206765249
transcript_57982.known	chr2	+	3188	12	FSM	ENSG00000118246.14	ENST00000236980.10	3188	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	70.6361881359701	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGGACTATTTTTTC	NA	False	NA	25	True	ATTAAA	-28	NA	206765356	206792509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206765655_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_57986.known	chr2	+	6712	12	FSM	ENSG00000118246.14	ENST00000402774.8	6712	12	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	53.8800320270847	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAATTTTGCTTTTA	5	True	NA	14	True	AATAAA	-23	NA	206765605	206796189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206765748_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_57990.known	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.51476551255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	5	True	NA	-3	True	AATAAA	-4	NA	206765605	206791806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_58.known	ERCC-00165	+	856	1	FSM	ERCC-00165A	DQ668363	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00165_+_0_900
transcript_580.known	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	12558	junction_8	1320.48302582336	32644	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	1	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
transcript_5800.known	chr1	+	2251	9	FSM	ENSG00000134255.15	ENST00000545121.5	2251	9	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	40.7760652834478	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGATGTGTCTTG	154	False	NA	9	True	AATAAA	-21	NA	111139626	111185102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111139762_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_58001.nnic	chr2	-	715	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	36	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	6	True	NA	-3	True	AATAAA	-18	NA	206812282	206806879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_206807239_206810036_206810139_206812028
transcript_58003.nnic	chr2	-	772	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	36	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	6	True	NA	-3	True	AATAAA	-18	NA	206812282	206806879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_206807239_206810036_206810196_206812028
transcript_58005.nnic	chr2	-	2606	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	5	True	NA	-3	True	AATAAA	-18	NA	206812283	206806879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_206807239_206810036
transcript_58007.nnic	chr2	-	648	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	206812317	206806879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr2_-_206807239_206812028
transcript_58016.known	chr2	-	8365	4	FSM	ENSG00000118263.15	ENST00000309446.11	8365	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCTAGTGTGACTGAA	-4	True	NA	NA	False	AATAAA	-16	NA	207165948	207074136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466
transcript_5802.known	chr1	+	2203	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	16.8281757775464	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGATGTGTCTTGTG	-10	True	NA	11	True	AATAAA	-23	NA	111140222	111185104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_58023.known	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	57.4280800218848	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	152	False	NA	21	True	CATAAA	-18	NA	207529891	207603431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_58029.known	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	76.6401610496369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	-3	True	NA	14	True	ATTAAA	-15	NA	207529736	207597789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_58032.known	chr2	+	10095	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	37.3188139890729	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	10	True	NA	NA	False	ATTAAA	-18	NA	207529961	207605988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_58048.known	chr2	-	869	4	FSM	ENSG00000144401.14	ENST00000425132.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	257.231845272358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGATTAGAGAAAGCTG	16	False	NA	NA	False	GATAAA	-22	NA	207625379	207581694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207582161_207621805_207621918_207624228_207624405_207625264
transcript_58053.known	chr2	-	4805	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	210.073003183814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	-3	True	NA	-15	True	AATAAA	-16	NA	207625249	207609114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
transcript_58054.known	chr2	-	1103	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	51.3290041464538	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGGCCGGTATAAAGAA	17	False	NA	-26	True	AATAAA	-19	NA	207625378	207612742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
transcript_58055.known	chr2	-	1003	4	FSM	ENSG00000144401.14	ENST00000442521.1	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	264.126653120977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATTTAATGAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	207625927	207612979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625676
transcript_58065.known	chr2	+	3813	10	FSM	ENSG00000163249.13	ENST00000295414.8	3813	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	17.5499287747842	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTAGTGTGTTTGTAA	-2	True	NA	NA	False	AATAAA	-18	NA	207711639	207756174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_58070.known	chr2	+	2619	8	FSM	ENSG00000163249.13	ENST00000339882.9	2619	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	61.8332187321306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGTCTGTAGTCCC	109	False	NA	NA	False	AATAAA	-16	NA	207711750	207755244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_58071.nic	chr2	+	813	7	ISM	ENSG00000163249.13	ENST00000392209.7	1952	11	275	12031	19	-8680	internal_fragment	FALSE	canonical	3	155	junction_3	19.1724628916927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCATCAGAACTTTAAGA	173	False	NA	4	True	AATAAA	-16	NA	207711814	207742434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222
transcript_58073.nnic	chr2	-	710	3	FSM	ENSG00000229150.2	ENST00000440809.2	621	3	-89	0	-89	0	multi-exon	TRUE	canonical	3	34	junction_2	56.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	NA	False	NA	-7	True	AATAAA	-24	NA	208112741	208108157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208108497_208112265_208112509_208112613
transcript_58074.nnic	chr2	-	628	3	NNC	ENSG00000229150.2	novel	621	3	NA	NA	-482	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	NA	False	NA	-7	True	AATAAA	-24	NA	208113134	208108157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_208108497_208112265_208112509_208113088
transcript_58075.known	chr2	-	423	2	FSM	ENSG00000229150.2	ENST00000689457.1	729	2	143	163	3	-84	multi-exon	FALSE	canonical	3	147	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGGCCGGGGGACTG	144	False	NA	NA	False	NA	NA	NA	208112508	208108316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208108497_208112265
transcript_58077.known	chr2	-	642	3	FSM	ENSG00000118231.5	ENST00000264376.5	642	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGCTTGTGTCTTTC	-2	True	NA	-3	True	AATAAA	-24	NA	208124524	208121606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208121946_208124111_208124355_208124464
transcript_58078.known	chr2	-	631	3	FSM	ENSG00000182187.4	ENST00000260988.5	631	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAGAGCCCTGTCTTTC	-2	True	NA	NA	False	AATAAA	-24	NA	208146158	208142572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208142914_208145773_208146017_208146111
transcript_58079.known	chr2	-	1195	9	FSM	ENSG00000188674.11	ENST00000341287.9	1195	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.14174095030078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCTTTCTCTCAGTAG	-5	True	NA	63	True	AATAAA	-17	NA	208190030	208165346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208165816_208170944_208171064_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945_208187062_208189952
transcript_58081.nic	chr2	-	973	7	NIC	ENSG00000188674.11	novel	1195	9	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.36708072936821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTCAATAAAGCATTAA	3194	False	NA	34	True	TTTAAA	-1	NA	208187065	208165375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_208165816_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945
transcript_58084.known	chr2	-	2441	10	FSM	ENSG00000138413.14	ENST00000415913.5	2441	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	1681.74380397914	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGATTTTAATTAAAAT	790	False	NA	-41	True	ATTAAA	-23	NA	208254322	208236264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254030
transcript_58086.known	chr2	-	2298	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	1679.94523720269	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	654	False	NA	-8	True	ATTAAA	-16	NA	208254458	208236231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
transcript_58088.known	chr2	-	2318	10	FSM	ENSG00000138413.14	ENST00000345146.7	2318	10	0	0	0	0	multi-exon	FALSE	canonical	3	4400	junction_2	506.555250907759	3022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGCGTTTCTGTTTA	2	True	NA	-5	True	ATTAAA	-19	NA	208255071	208236228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
transcript_58097.known	chr2	-	1614	4	FSM	ENSG00000138413.14	ENST00000462386.5	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_3	331.365189615459	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTGCTTCTTTACTT	12	True	NA	NA	False	ACTAAA	-23	NA	208255061	208247381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938
transcript_58099.known	chr2	-	556	3	FSM	ENSG00000138413.14	ENST00000481557.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_2	372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAAAGGGA	-1	True	NA	NA	False	TTTAAA	-2	NA	208255113	208251260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_208251568_208253885_208253960_208254938
transcript_581.known	chr1	+	1025	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	0	9	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCATTGGTGGAATG	-35	True	NA	7	True	AATAAA	-20	NA	9182163	9192089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9182317_9183632_9183808_9191392
transcript_58103.known	chr2	+	464	2	FSM	ENSG00000231908.2	ENST00000440574.2	497	2	33	0	33	0	multi-exon	FALSE	canonical	3	57	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGCTTGTATATTGCT	19	False	NA	26	True	AATAAA	-31	NA	208255246	208256181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_208255432_208255902
transcript_58105.known	chr2	+	2752	13	FSM	ENSG00000144407.10	ENST00000272847.7	2752	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.74535599249993	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGATCACTTTTTAA	96	False	NA	NA	False	ATTAAA	-18	NA	208406791	208494506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_208407119_208428200_208428304_208437536_208437648_208437759_208437882_208442363_208442462_208443347_208443538_208444733_208444888_208450748_208450810_208459894_208459962_208481069_208481165_208489011_208489151_208490638_208490681_208493263
transcript_58106.known	chr2	-	808	4	FSM	ENSG00000144445.17	ENST00000438563.5	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATAGTGGTGAT	942	False	NA	NA	False	NA	NA	NA	210153603	210097848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210098208_210104103_210104302_210129030_210129173_210153494
transcript_5811.nnic	chr1	-	1194	9	NNC	ENSG00000156171.15	novel	2098	10	NA	NA	1	217	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	94.740434873395	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAGTTTTTTATACCT	-1	True	NA	-21	True	AATAAA	-16	NA	111140089	111117906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120531_111120694_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_58113.known	chr2	+	1128	7	FSM	ENSG00000197713.15	ENST00000436630.6	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_3	227.327712540484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCATATTAGCTACACTA	NA	False	NA	NA	False	NA	NA	NA	210002583	210020100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_58118.known	chr2	+	925	7	FSM	ENSG00000197713.15	ENST00000429907.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	265.151948051595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAGGTCAGAAATTG	10	True	NA	17	True	ATTAAA	-18	NA	210002641	210019940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210018152_210018222_210019668
transcript_58129.known	chr2	+	2511	7	FSM	ENSG00000197713.15	ENST00000429921.5	2511	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	264.867734287638	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCAGTATTGAATTGA	-4	True	NA	25	True	AATAAA	-25	NA	210002627	210021576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210003437_210003469_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_58132.known	chr2	+	858	6	FSM	ENSG00000197713.15	ENST00000435437.2	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	233.801967485306	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	25	False	NA	38	True	ATTAAA	-39	NA	210002656	210019961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019672
transcript_58136.known	chr2	+	2130	6	FSM	ENSG00000197713.15	ENST00000454822.5	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	257.629656677953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTTGAGGCTACTAT	-4	True	NA	NA	False	AATAAA	-17	NA	210002627	210021226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_58147.known	chr2	+	796	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	234.523319736013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	11	True	NA	38	True	ATTAAA	-39	NA	210002642	210019961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_5815.known	chr1	-	769	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	94.0816666519041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-2	True	NA	NA	False	AATAAA	-25	NA	111140090	111125377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_58151.known	chr2	+	740	1	FSM	ENSG00000272807.1	ENST00000608095.1	740	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAATCTCTTGGTAGATG	NA	False	NA	8	True	AATAAA	-26	NA	210028416	210029156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_210028400_210029200
transcript_58153.known	chr2	-	4592	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_9	40.0844786931147	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCATGTGCTTTTTGT	-28	True	NA	-8	True	AATAAA	-18	NA	210476759	210431250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
transcript_58154.known	chr2	-	1270	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	103.005932946711	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATAGCATGCCACCTGC	811	False	NA	NA	False	NA	NA	NA	210476775	210434486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
transcript_58159.known	chr2	-	4503	10	FSM	ENSG00000115365.12	ENST00000441020.7	4503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	119.366020766298	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-26	True	NA	-6	True	AATAAA	-20	NA	210476757	210431248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476708
transcript_58160.known	chr2	-	1647	10	FSM	ENSG00000115365.12	ENST00000233714.8	1647	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	118.437773420643	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTATTATTGGGTA	26	True	NA	NA	False	GATAAA	-7	NA	210476705	210434114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476646
transcript_58162.nnic	chr2	-	3296	7	NNC	ENSG00000178568.15	novel	11699	26	NA	NA	73346	-42364	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_3	42.0135560133737	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGCATTTTGAAAATATA	-2	False	NA	NA	False	NA	NA	NA	211592008	211418084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_211420612_211422006_211422105_211424154_211424302_211428407_211428484_211430944_211431101_211561902_211562089_211591902
transcript_58165.nnic	chr2	-	1919	2	NNC	ENSG00000178568.15	novel	2680	20	NA	NA	73346	1486	at_least_one_novel_splicesite	FALSE	canonical	3	250	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCTAAGC	-2	False	NA	NA	False	NA	NA	NA	211592008	211560275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_211562089_211591902
transcript_58172.known	chr2	+	1250	5	FSM	ENSG00000144451.20	ENST00000432529.6	1250	5	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_3	31.7411404962078	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATACTGTTTTCCAT	NA	False	NA	25	True	AATAAA	-21	NA	213284391	213317978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_213284620_213296063_213296111_213297261_213297358_213310058_213310178_213317218
transcript_58178.known	chr2	-	5478	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_8	20.4550727204769	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTTTAAGAGCTGTAA	0	True	NA	-11	True	AATAAA	-18	NA	214809683	214725645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
transcript_58179.known	chr2	-	2261	10	FSM	ENSG00000138376.11	ENST00000455743.5	2261	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	45.7588957822397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGCTTCCTCTTG	10	True	NA	NA	False	NA	NA	NA	214809673	214728703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214797060_214797118_214809411
transcript_58180.known	chr2	-	1456	10	FSM	ENSG00000138376.11	ENST00000620057.4	1456	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	46.7390972300123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTATACCAGATGAACA	0	True	NA	-118	True	NA	NA	NA	214809642	214728676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214792296_214792446_214797060_214797118_214809411
transcript_58181.nic	chr2	-	783	4	ISM	ENSG00000138376.11	ENST00000613706.5	2131	11	-46	52666	-46	-354	5prime_fragment	FALSE	canonical	3	94	junction_1	21.9544984001001	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTTTAGCTGAAATCA	-4	True	NA	NA	False	AAAAAG	-33	NA	214809729	214781250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_214781510_214792296_214792446_214797060_214797118_214809411
transcript_58184.known	chr2	+	2089	3	FSM	ENSG00000229267.3	ENST00000664818.1	2089	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGCATCATCTGATAC	1032	False	NA	NA	False	NA	NA	NA	214810216	214963565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_214810433_214833988_214834106_214961809
transcript_58192.known	chr2	+	1972	16	FSM	ENSG00000138363.15	ENST00000236959.14	1972	16	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_10	57.6537557801359	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATAGTTTTTGGTAGTTG	-29	True	NA	28	True	AATAAA	-23	NA	215312058	215349764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_215312162_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_58195.known	chr2	+	2187	16	FSM	ENSG00000138363.15	ENST00000443953.5	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	199.520246814425	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	-16	True	NA	27	True	AATAAA	-22	NA	215312071	215349763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_215312391_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_5821.known	chr1	+	2110	3	FSM	ENSG00000134255.15	ENST00000480324.5	2110	3	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	54	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTGAAATTATGGGG	182	False	NA	NA	False	NA	NA	NA	111139654	111160970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111139762_111147641_111148054_111159379
transcript_58216.known	chr2	-	1867	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.0707126868877	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCAGTGCCTGATTT	-8	True	NA	-6	True	TATAAA	-37	NA	216081809	216038387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
transcript_5822.nic	chr1	+	2100	3	ISM	ENSG00000134255.15	ENST00000357172.9	2203	9	-12	24134	-12	0	5prime_fragment	FALSE	canonical	3	120	junction_2	8	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTGAAATTATGGGG	-22	True	NA	NA	False	NA	NA	NA	111140210	111160970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_111140308_111147641_111148054_111159379
transcript_58222.nnic	chr2	-	2056	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	191	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCGTATTGTTTTACT	251	False	NA	-28	True	AATAAA	-15	NA	216013360	215942802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_215943588_215944269_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_58223.nnic	chr2	-	2050	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	191	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGTCGTATTGTTTT	251	False	NA	-31	True	AATAAA	-12	NA	216013360	215942805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_215943596_215944280_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_58227.known	chr2	+	3342	3	FSM	ENSG00000163449.11	ENST00000295658.8	3342	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGAGGCTCTTC	-9	True	NA	15	True	AATAAA	-27	NA	216081894	216102783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216081976_216095837_216096235_216099919
transcript_5823.known	chr1	+	1966	9	NNC	ENSG00000134255.15	novel	2251	9	NA	NA	4195	-112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	44.4374560477982	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTCTCAGTTTTACT	1941	False	NA	13	True	AATAAA	-18	NA	111147676	111184988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182298_111182298_111182319_111182798_111182958_111183461_111183588_111184190
transcript_58236.known	chr2	+	3379	21	FSM	ENSG00000079246.16	ENST00000392132.7	3379	21	0	0	0	0	multi-exon	FALSE	canonical	3	4274	junction_7	355.893382911231	3335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	2	True	NA	44	True	ATTAAA	-28	NA	216109347	216206293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_5824.known	chr1	+	2293	6	FSM	ENSG00000173947.14	ENST00000369738.9	2293	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	3.2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	3	True	NA	NA	False	AATAAA	-18	NA	111346621	111353013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111348647_111350105_111350224_111351258
transcript_58253.known	chr2	+	3761	23	FSM	ENSG00000079246.16	ENST00000392133.7	3761	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1455.23471240272	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTCTGCAAAAGACTT	NA	False	NA	54	True	ATTAAA	-38	NA	216107463	216206303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216107533_216107652_216107699_216109090_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_58258.known	chr2	+	3201	18	FSM	ENSG00000138375.13	ENST00000357276.9	3201	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.1599675414008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	-11	True	NA	44	True	AATAAA	-22	NA	216412483	216483053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216412649_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_58260.known	chr2	+	3056	18	FSM	ENSG00000138375.13	ENST00000358207.9	3056	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	38.2326695931824	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	185	False	NA	8	True	AATAAA	-17	NA	216412742	216483017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216412799_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_58266.known	chr2	+	385	5	FSM	ENSG00000197756.10	ENST00000420712.1	385	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5673.46490250887	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATTGCCTTGGCTTGTT	18	False	NA	12	True	AATAAA	-18	NA	216498861	216501462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499831_216499867_216499948_216500032_216501340
transcript_5827.known	chr1	+	746	5	FSM	ENSG00000173947.14	ENST00000369737.4	746	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	21.6852484422014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTTGGGTGATTTCA	1	True	NA	68	True	NA	NA	NA	111346619	111351563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111346672_111346909_111347050_111348515_111348647_111350105_111350224_111351258
transcript_58271.known	chr2	+	2992	4	FSM	ENSG00000197756.10	ENST00000491306.6	2992	4	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	1836.44003441441	15477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCATTTCATTGTATC	0	True	NA	-59	True	TATAAA	-26	NA	216498843	216504086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216501340
transcript_58272.known	chr2	+	425	4	FSM	ENSG00000197756.10	ENST00000600880.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	5368.00033118065	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGATCATGCCTCAT	6	True	NA	NA	False	NA	NA	NA	216498849	216529454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216529269
transcript_58277.known	chr2	+	1701	3	FSM	ENSG00000197756.10	ENST00000490649.1	1701	3	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	1914	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	11	False	NA	17	True	AATAAA	-23	NA	216498824	216501467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948
transcript_58279.known	chr2	+	2225	2	FSM	ENSG00000197756.10	ENST00000487233.1	2225	2	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAATTGCCTTGGCTTG	0	True	NA	10	True	AATAAA	-16	NA	216498843	216501460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269
transcript_58280.known	chr2	+	742	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	12844	junction_1	66	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	23	False	NA	17	True	AATAAA	-23	NA	216498866	216501467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216499399_216499948_216500032_216501340
transcript_58281.known	chr2	+	495	4	FSM	ENSG00000197756.10	ENST00000446558.5	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5383.3358513926	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCTTTACTCCTATAC	11	False	NA	8	True	AATATA	-21	NA	216498854	216579180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216578920
transcript_58282.nnic	chr2	+	1105	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	211	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	2536.8375763712	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	NA	False	NA	16	True	ATTAAA	-16	NA	216633038	216664436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_216633276_216660556_216660787_216661857_216661999_216663939
transcript_58283.known	chr2	+	1414	4	FSM	ENSG00000115457.10	ENST00000233809.9	1414	4	0	0	0	0	multi-exon	FALSE	canonical	3	5164	junction_1	188.639574026472	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	-2	True	NA	16	True	ATTAAA	-16	NA	216633419	216664436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_216633966_216660556_216660787_216661857_216661999_216663939
transcript_58284.nnic	chr2	+	920	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	2618	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	2549.54327064455	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	1140	False	NA	16	True	ATTAAA	-16	NA	216636046	216664436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_216636099_216660556_216660787_216661857_216661999_216663939
transcript_58294.known	chr2	+	1410	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	0	0	0	0	multi-exon	TRUE	canonical	3	2728	junction_1	276.943116903093	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAATTTGCTGGGTTT	19	True	NA	30	True	AATAAA	-19	NA	218217188	218254348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_583.known	chr1	+	1007	2	FSM	ENSG00000171621.14	ENST00000377399.2	1007	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCGCCATCATACCGCCA	NA	False	NA	NA	False	NA	NA	NA	9355706	9367575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9356586_9367447
transcript_58312.known	chr2	+	2221	7	FSM	ENSG00000163466.16	ENST00000477992.1	2221	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	1203.52395766211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	6525	False	NA	40	True	NA	NA	NA	218235340	218254108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218236734_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_58313.known	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	2964	junction_9	229.324989081617	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	40	False	NA	38	True	AATAAA	-27	NA	218217209	218254356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_58314.known	chr2	+	1384	2	FSM	ENSG00000179921.15	ENST00000519574.2	1384	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATCTCATTCCATATC	1	True	NA	NA	False	AATAAA	-18	NA	218261014	218263861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218261217_218262679
transcript_58316.known	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	336.908429695667	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	9156	False	NA	-6	True	AATAAA	-15	NA	218270178	218264128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
transcript_58319.known	chr2	-	1833	10	FSM	ENSG00000127837.10	ENST00000489767.5	1833	10	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_9	47.1451658886324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAGATACTAGTTAAAG	21	True	NA	-60	True	NA	NA	NA	218270116	218264182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_58329.known	chr2	-	1761	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_1	37.415913957619	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	9594	False	NA	-39	True	NA	NA	NA	218269740	218264161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
transcript_58332.known	chr2	-	2292	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	63.5635947576315	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	6	True	NA	-5	True	AATAAA	-22	NA	218292503	218274196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
transcript_58334.known	chr2	-	1251	11	FSM	ENSG00000135926.15	ENST00000445635.5	1251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	65.6950530862104	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATAGGCCATTATCCT	-4	True	NA	NA	False	NA	NA	NA	218292513	218275005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218292465
transcript_58335.known	chr2	+	2991	9	FSM	ENSG00000127838.15	ENST00000258362.7	2991	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	7.68012857965282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCACCCAACAGCT	9	True	NA	24	True	AATAAA	-28	NA	218323172	218346791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218323432_218339782_218339899_218340028_218340142_218340727_218340787_218341533_218341627_218341980_218342145_218343499_218343587_218344454_218344571_218344807
transcript_58337.known	chr2	+	758	3	FSM	ENSG00000127838.15	ENST00000248451.7	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_1	121	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	3942	False	NA	22	True	AATAAA	-27	NA	218270391	218272947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218270603_218271380_218271550_218272569
transcript_58340.nnic	chr2	+	593	3	NNC	ENSG00000127838.15	novel	758	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	605	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	-10	True	NA	22	True	AATAAA	-27	NA	218270513	218272947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_218270603_218271423_218271550_218272569
transcript_58341.known	chr2	+	1372	2	FSM	ENSG00000127838.15	ENST00000469689.1	1372	2	0	0	0	0	multi-exon	FALSE	canonical	3	1257	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATAAAGTTATTGAGT	-4	True	NA	-14	True	NA	NA	NA	218270519	218272911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218271550_218272569
transcript_58342.known	chr2	+	2525	7	FSM	ENSG00000144579.8	ENST00000273062.7	2525	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	14.5028732785381	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	-6	True	NA	29	True	ACTAAA	-19	NA	218399867	218405941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218400158_218401563_218401713_218402110_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_58343.known	chr2	+	842	7	FSM	ENSG00000144579.8	ENST00000428361.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9791530856092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTGCCCAGGCCT	227	False	NA	NA	False	NA	NA	NA	218400307	218404479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218400380_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_58344.known	chr2	+	998	6	FSM	ENSG00000144579.8	ENST00000497677.5	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.96794863550169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATTTTAACAAAATGAAA	-10	True	NA	-24	True	NA	NA	NA	218400070	218403741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218400158_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231
transcript_58345.known	chr2	-	8022	26	FSM	ENSG00000135913.11	ENST00000258399.8	8022	26	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_14	13.1054797699283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGACTGTTATTTC	-16	True	NA	-4	True	ATTAAA	-17	NA	218568351	218450250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_58347.nnic	chr2	-	2321	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-18	2581	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	16.0252925090308	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATTGTAAAATTTTAG	-34	True	NA	NA	False	AATAAA	-14	NA	218568369	218525689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_58350.nnic	chr2	-	1770	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-18	2030	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	16.0252925090308	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAACCATTCAAC	-34	True	NA	NA	False	NA	NA	NA	218568369	218526240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_58352.nnic	chr2	-	1601	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-18	1861	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	16.0252925090308	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAAAATTAGCTGGGC	-34	True	NA	NA	False	ACTAAA	-3	NA	218568369	218526409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_58354.known	chr2	-	5019	26	FSM	ENSG00000135913.11	ENST00000454775.5	5019	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_23	15.2656477098091	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAAAC	10	True	NA	NA	False	ATTAAA	-8	NA	218568325	218453267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558718_218560819_218560884_218562672_218562814_218568177
transcript_58356.known	chr2	+	6500	20	FSM	ENSG00000127831.11	ENST00000248444.10	6500	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	10.1528484874922	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTCAGACTGCAGT	1	True	NA	NA	False	NA	NA	NA	218419122	218453295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724_218430879_218431856_218431958_218432045_218432184_218432792_218432952_218434525_218434706_218435288_218435435_218436481_218436627_218437123_218437313_218438657_218438727_218440721_218440863_218449222
transcript_58362.nic	chr2	+	1688	10	ISM	ENSG00000127831.11	ENST00000248444.10	6500	20	-41	21929	-39	150	5prime_fragment	FALSE	canonical	3	45	junction_3	4.69041575982343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGGGAGCTGTCAG	NA	False	NA	NA	False	NA	NA	NA	218419081	218431366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724
transcript_58367.known	chr2	+	1126	8	FSM	ENSG00000144580.14	ENST00000295701.9	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	113.677129608019	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAACTATTGAACC	-1	True	NA	3	True	AATAAA	-18	NA	218568874	218593842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218593527
transcript_58369.known	chr2	+	3820	8	FSM	ENSG00000144580.14	ENST00000273064.11	3820	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	38.1142214606441	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATAGGAAACCTTAG	9	True	NA	NA	False	NA	NA	NA	218568838	218597080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107
transcript_58380.known	chr2	+	1525	9	FSM	ENSG00000074582.15	ENST00000392110.6	1525	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	63.4187472282447	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	5	True	NA	14	True	AATAAA	-14	NA	218659713	218663442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659744_218660036_218660167_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_58381.known	chr2	+	1636	9	FSM	ENSG00000074582.15	ENST00000392111.7	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	64.4882498987219	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	-26	True	NA	15	True	AATAAA	-15	NA	218659682	218663443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659744_218660036_218660246_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_58386.known	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	60.3629646389241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	5	False	NA	-24	True	NA	NA	NA	218659759	218663404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_58390.nnic	chr2	+	1563	9	NNC	ENSG00000074582.15	novel	1483	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	62.1545452883375	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	21	True	NA	15	True	AATAAA	-15	NA	218659729	218663443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_218659812_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_58393.nic	chr2	+	2341	8	NIC	ENSG00000074582.15	novel	1636	9	NA	NA	12	0	intron_retention	FALSE	canonical	3	21	junction_1	52.1395302265459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	NA	False	NA	15	True	AATAAA	-15	NA	218659670	218663443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_218659744_218660036_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_58395.known	chr2	+	1427	8	FSM	ENSG00000074582.15	ENST00000359273.8	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	50.2986996220923	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	-26	True	NA	15	True	AATAAA	-15	NA	218659682	218663443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659744_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_58396.known	chr2	+	1430	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.7680089421719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	28	True	NA	15	True	AATAAA	-15	NA	218659736	218663443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_584.known	chr1	-	939	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	21	18	-21	multi-exon	FALSE	canonical	1	1	junction_1	40.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGCATTTCTCATCCTA	16	True	NA	-21	True	AATAAA	-12	NA	9687555	9672425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9672720_9680711_9681136_9687334
transcript_58402.known	chr2	+	2015	8	FSM	ENSG00000074582.15	ENST00000431802.5	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	48.1778168955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	17	False	NA	14	True	AATAAA	-14	NA	218659771	218663442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_58405.known	chr2	-	1477	10	FSM	ENSG00000163481.8	ENST00000295704.7	1477	10	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	24.7835070605881	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-13	True	NA	-35	True	AATAAA	-15	NA	218672002	218663891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
transcript_5841.known	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_1	51.3679536935886	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-11	True	NA	1	True	AGTAAA	-16	NA	111449256	111439889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_58410.known	chr2	+	4873	27	FSM	ENSG00000163482.12	ENST00000295709.8	4873	27	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	22.5049961579869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGTCTGGCAGCTTA	26	True	NA	10	True	NA	NA	NA	218672085	218702715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_58411.known	chr2	+	4821	27	FSM	ENSG00000163482.12	ENST00000392105.7	4821	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_21	25.0481488999409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATCCTGGTCTGGC	9	True	NA	4	True	NA	NA	NA	218672068	218702709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696589_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_58412.known	chr2	-	5946	35	FSM	ENSG00000181378.14	ENST00000341552.10	5946	35	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3.9402984096504	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTTGACTTTATTTCC	-3	True	NA	-2	True	AGTAAA	-23	NA	219041516	219002845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219003022_219003134_219003273_219003951_219004456_219005433_219005563_219006020_219006224_219006464_219006510_219009046_219009155_219009346_219009461_219009941_219010086_219010545_219010705_219010804_219010997_219013258_219013370_219013518_219013586_219013867_219014045_219019050_219019180_219019505_219019720_219021151_219021281_219021779_219021931_219022170_219022330_219023206_219023432_219024014_219024261_219026021_219026160_219027649_219028010_219028200_219028402_219029402_219029669_219029985_219030209_219030688_219030835_219031105_219031306_219031488_219031659_219032469_219032573_219035479_219035665_219038374_219038579_219038895_219039051_219040518_219040565_219041487
transcript_58413.nnic	chr2	-	2219	9	NNC	ENSG00000187736.13	novel	2113	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	58.059775232083	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	9210	False	NA	-31	True	AATAAA	-18	NA	219160824	219075328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219159169_219159332_219160719
transcript_58415.nic	chr2	-	2102	8	NIC	ENSG00000187736.13	novel	2113	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	45.276024199867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	-14	True	NA	-31	True	AATAAA	-18	NA	219160854	219075328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219076456_219077245_219077365_219078073_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_58416.nic	chr2	-	1998	8	NIC	ENSG00000187736.13	novel	2113	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	44.982082600765	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	-3	True	NA	-31	True	AATAAA	-18	NA	219160555	219075328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160509
transcript_58417.nnic	chr2	-	1981	8	NNC	ENSG00000187736.13	novel	2113	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	47.7155688450225	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	-3	True	NA	-31	True	AATAAA	-18	NA	219160555	219075328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160526
transcript_58418.known	chr2	-	8020	8	FSM	ENSG00000187736.13	ENST00000356853.10	8020	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_7	14.3270829592925	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTATTTTCATTTGT	-13	True	NA	-3	True	ATTAAA	-18	NA	219160815	219069356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_58426.known	chr2	-	1954	7	FSM	ENSG00000187736.13	ENST00000409720.5	1954	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.9628606688362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAACATTTATTGAGCA	2478	False	NA	-19	True	AATAAA	-30	NA	219158362	219075316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219076446_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185
transcript_58427.known	chr2	-	1154	9	FSM	ENSG00000115649.16	ENST00000453038.5	1154	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	116.600546739713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGTCTTCTGGCCTCA	826	False	NA	NA	False	GGGGCT	-12	NA	219177313	219172893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177103
transcript_58428.nnic	chr2	-	1998	9	NNC	ENSG00000115649.16	novel	2073	9	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_8	111.078730524795	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	219178177	219171896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219178120
transcript_58431.known	chr2	-	2019	8	FSM	ENSG00000115649.16	ENST00000360507.10	2019	8	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_7	22.8901547324056	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	15	True	NA	-5	True	AATAAA	-15	NA	219176925	219171896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759
transcript_58435.known	chr2	+	944	10	FSM	ENSG00000158552.13	ENST00000409336.5	944	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	49.0532590377257	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGGAGGTCGCCCTG	17	True	NA	NA	False	NA	NA	NA	219206808	219209418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_58437.known	chr2	+	1322	9	FSM	ENSG00000158552.13	ENST00000289528.10	1322	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	18.8348082018374	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	-10	True	NA	NA	False	AATAAA	-26	NA	219206781	219209648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_58441.known	chr2	+	886	7	FSM	ENSG00000158552.13	ENST00000409217.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	11.066716867356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTAGGTGGGACCACTC	23	True	NA	NA	False	NA	NA	NA	219206814	219208696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571
transcript_58443.known	chr2	-	2980	19	FSM	ENSG00000115657.14	ENST00000265316.9	2980	19	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_17	32.3526097560103	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	-2	True	NA	-8	True	AATAAA	-14	NA	219218958	219209771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219217669_219217808_219218124
transcript_58444.known	chr2	-	2878	18	FSM	ENSG00000115657.14	ENST00000295750.5	2878	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	61.3292774848735	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	219218994	219209771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219218124
transcript_58449.known	chr2	-	3770	16	FSM	ENSG00000198925.12	ENST00000361242.9	3770	16	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_15	76.6331520948995	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-28	True	NA	-3	True	AATAAA	-18	NA	219229636	219219379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_58450.known	chr2	-	3799	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	0	0	0	multi-exon	FALSE	canonical	2	102	junction_14	95.5612048770369	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	9037	False	NA	-3	True	AATAAA	-18	NA	219229717	219219379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
transcript_58453.known	chr2	-	4025	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_15	100.684236877257	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-28	True	NA	-5	True	AATAAA	-16	NA	219229368	219219381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
transcript_58454.known	chr2	-	2725	17	FSM	ENSG00000163521.16	ENST00000295759.12	2725	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	4.60934851687307	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTAGCCCTGTCTTTG	-21	True	NA	-2	True	ATTAAA	-27	NA	219245444	219236597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243644_219245228
transcript_58459.known	chr2	+	2540	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_5	65.1009230158436	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTAGTTCCTTA	-29	True	NA	66	True	AATAAA	-42	NA	219229805	219236679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_58460.known	chr2	+	2940	13	FSM	ENSG00000163516.14	ENST00000477479.5	2940	13	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	88.5219683970532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAATCACAATAAA	-8	True	NA	5	True	NA	NA	NA	219229826	219236618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_58469.known	chr2	+	3245	11	FSM	ENSG00000163516.14	ENST00000463792.5	3245	11	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	95.8121077943701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	3	True	NA	38	True	AATAAA	-14	NA	219229837	219236651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235876_219236009_219236096_219236321
transcript_58472.known	chr2	+	2155	11	FSM	ENSG00000163516.14	ENST00000409849.5	2155	11	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_1	101.402416144784	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGGCACTGTGGCCTT	446	False	NA	56	True	AATAAA	-32	NA	219229786	219236669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229901_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_58481.known	chr2	+	2868	8	FSM	ENSG00000115661.14	ENST00000409638.7	2868	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.73946317089104	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	NA	False	NA	3	True	AATAAA	-15	NA	219245454	219250337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219245523_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_58487.known	chr2	+	3118	8	FSM	ENSG00000115661.14	ENST00000396738.7	3118	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.49328441476351	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	-24	True	NA	3	True	AATAAA	-15	NA	219245478	219250337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219245797_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_58498.known	chr2	-	673	4	FSM	ENSG00000127824.15	ENST00000456818.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	96.9409900689876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTACAGCCGTGGTC	1591	False	NA	NA	False	AAGAAA	-35	NA	219253145	219251172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219252995
transcript_58499.known	chr2	-	648	4	FSM	ENSG00000127824.15	ENST00000447205.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	93.6601421215141	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	1382	False	NA	NA	False	AAGAAA	-14	NA	219253354	219251193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253208
transcript_585.nnic	chr1	-	566	2	NIC	ENSG00000231789.3	novel	978	3	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAATGGTTCATCA	-14	True	NA	0	True	AATAAA	-33	NA	9687585	9672404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_9672720_9687334
transcript_58501.known	chr2	-	2049	4	FSM	ENSG00000127824.15	ENST00000248437.9	2049	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	22.0655588845805	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTGATTTCTTTC	-1	True	NA	-2	True	ATTAAA	-17	NA	219253918	219249709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253855
transcript_58502.known	chr2	-	790	3	FSM	ENSG00000127824.15	ENST00000498660.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAGGATGTCAACGCT	835	False	NA	NA	False	NA	NA	NA	219253901	219250728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219251324_219251564_219251714_219253855
transcript_58504.known	chr2	-	2574	17	FSM	ENSG00000163521.16	ENST00000392089.6	2574	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	4.11884009764885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTAACCCTTG	9258	False	NA	NA	False	NA	NA	NA	219245478	219236770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243632_219245228
transcript_58505.known	chr2	+	993	5	FSM	ENSG00000163516.14	ENST00000486203.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	17.2699160391705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATGCAACAGATATGT	12	True	NA	NA	False	ATTAAA	-44	NA	219229846	219233034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489
transcript_58506.known	chr2	+	579	2	FSM	ENSG00000115661.14	ENST00000491697.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGTCAAGTGCAGAG	-30	True	NA	62	True	NA	NA	NA	219245472	219246424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219245523_219245895
transcript_58508.known	chr2	+	1946	10	FSM	ENSG00000135924.17	ENST00000392086.8	1946	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	4.90149888891395	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	-25	True	NA	17	True	AATAAA	-18	NA	219279343	219286898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_58509.nnic	chr2	+	1797	10	NNC	ENSG00000135924.17	novel	1946	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.42547113797711	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	57	False	NA	17	True	AATAAA	-18	NA	219279510	219286898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_219279537_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_58511.nic	chr2	+	2054	9	NIC	ENSG00000135924.17	novel	1946	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	20	junction_6	4.91012983535059	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	61	False	NA	17	True	AATAAA	-18	NA	219279514	219286898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_58513.known	chr2	+	311	3	FSM	ENSG00000230432.1	ENST00000417355.1	311	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	NA	False	NA	8	True	AATAAA	-19	NA	219299001	219304130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219299129_219300374_219300425_219303996
transcript_58514.known	chr2	-	1657	15	FSM	ENSG00000123992.20	ENST00000373963.5	1657	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	156.242697788552	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-17	True	NA	-5	True	ATTAAA	-16	NA	219387929	219374195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387758
transcript_58516.known	chr2	-	1875	15	FSM	ENSG00000123992.20	ENST00000373966.5	1875	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	170.694320410517	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-20	True	NA	-5	True	ATTAAA	-16	NA	219387932	219374195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
transcript_58517.known	chr2	-	3825	15	FSM	ENSG00000123992.20	ENST00000273075.9	3825	15	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_9	43.2989725098433	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATCATTGTACATTTG	0	True	NA	-13	True	GATAAA	-5	NA	219387912	219372042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_58520.nic	chr2	-	1746	15	NIC	ENSG00000123992.20	novel	1578	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	219.24671593659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCGTGCTACGCTTATT	79	False	NA	-3	True	ATTAAA	-18	NA	219387833	219374193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387575
transcript_58523.nic	chr2	-	1628	15	NIC	ENSG00000123992.20	novel	1662	15	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	171.193052500648	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCGTGCTACGCTTATT	527	False	NA	-3	True	ATTAAA	-18	NA	219387385	219374193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387277
transcript_58533.known	chr2	-	1610	8	FSM	ENSG00000123992.20	ENST00000460963.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_2	46.517935974707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAACAAAA	1	True	NA	NA	False	NA	NA	NA	219387792	219384585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_58537.known	chr2	+	1501	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	66.6583328124349	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	17	True	NA	16	True	AATAAA	-16	NA	219498905	219506988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58539.known	chr2	+	1725	13	FSM	ENSG00000144591.20	ENST00000683691.1	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.078764659794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	110	False	NA	-8	True	NA	NA	NA	219498998	219506964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219499255_219499960_219500021_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58540.known	chr2	+	1823	13	FSM	ENSG00000144591.20	ENST00000358215.8	1823	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	70.590515179685	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	12	True	NA	17	True	AATAAA	-17	NA	219498900	219506989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58542.known	chr2	+	1797	13	FSM	ENSG00000144591.20	ENST00000622191.2	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	80.3817281614561	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	18	True	NA	-8	True	NA	NA	NA	219498906	219506964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58546.known	chr2	+	1630	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	53.2821896653768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	-1	True	NA	-37	True	NA	NA	NA	219498887	219506935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58548.known	chr2	+	1814	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	93.2026140874132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-24	True	NA	-8	True	NA	NA	NA	219498864	219506964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58549.known	chr2	+	1799	12	FSM	ENSG00000144591.20	ENST00000684274.1	1799	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.9407536219162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-24	True	NA	-8	True	NA	NA	NA	219498864	219506964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504219_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58560.known	chr2	+	1457	5	FSM	ENSG00000072195.15	ENST00000396688.5	1457	5	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	35.7980446393375	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCCAGTTTGTACCT	31	False	NA	-9	True	NA	NA	NA	219460765	219466841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219460997_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_58563.known	chr2	+	1746	13	FSM	ENSG00000144591.20	ENST00000455657.6	1746	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	105.168482551676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-1	True	NA	-8	True	NA	NA	NA	219498887	219506964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505292_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_58564.known	chr2	+	2213	5	FSM	ENSG00000188760.11	ENST00000373883.4	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	6.60965203320114	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTTTGGTGGCTGG	-7	True	NA	34	True	TATAAA	-31	NA	219544027	219550595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219544378_219544688_219544894_219547505_219548082_219549151_219549355_219549716
transcript_58566.nic	chr2	-	673	4	ISM	ENSG00000124006.15	ENST00000373876.5	5503	20	18523	-28	-4	0	3prime_fragment	FALSE	canonical	3	35	junction_3	27.5358352374178	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	-8	True	NA	-3	True	AATAAA	-15	NA	219552718	219550727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535
transcript_58567.known	chr2	-	694	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	38.6637929966641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-4	True	NA	-4	True	AATAAA	-14	NA	219552714	219550728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
transcript_58568.nic	chr2	-	1201	4	ISM	ENSG00000124006.15	ENST00000373873.8	3297	9	5680	0	-230	0	3prime_fragment	FALSE	canonical	3	245	junction_1	56.482052213267	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	6463	False	NA	-17	True	AATAAA	-17	NA	219565609	219561721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241
transcript_58569.known	chr2	-	662	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	5	True	NA	-4	True	AATAAA	-14	NA	219552389	219550728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219550843_219551528_219551799_219552111
transcript_58571.known	chr2	-	5380	16	FSM	ENSG00000124006.15	ENST00000465149.1	5380	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	134.190147013689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	1333	False	NA	-4	True	AATAAA	-14	NA	219570739	219550728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_219551799_219552111_219552217_219552535_219553025_219556019_219556293_219556577_219556724_219557342_219557619_219557822_219558111_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_58573.known	chr2	+	1351	2	FSM	ENSG00000123999.5	ENST00000243786.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTTCTCCAGCTTCTC	-10	True	NA	12	True	AATAAA	-23	NA	219572309	219575711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219572643_219574693
transcript_58574.nic	chr2	-	1366	2	ISM	ENSG00000124006.15	ENST00000465149.1	5380	16	18332	0	-18	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-13	True	NA	-4	True	AATAAA	-14	NA	219552407	219550728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_219551799_219552111
transcript_58575.known	chr2	+	3618	25	FSM	ENSG00000144589.22	ENST00000456909.6	3618	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	16.3271672034339	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	-4	True	NA	22	True	AATAAA	-18	NA	219597856	219616451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615093_219615342_219616043
transcript_58579.known	chr2	-	6362	18	FSM	ENSG00000116106.12	ENST00000281821.7	6362	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	3.86448651897808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTGTCTCTTTCAATA	-15	True	NA	2	True	AATAAA	-26	NA	221572304	221418026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_221420553_221425208_221426143_221426463_221426620_221429957_221430152_221434141_221434292_221436398_221436609_221437060_221437123_221442828_221443015_221443492_221443607_221446122_221446182_221455546_221455659_221456612_221456773_221457865_221457991_221482351_221482691_221501016_221501173_221563730_221564395_221568717_221568786_221572157
transcript_5858.known	chr1	+	1040	6	FSM	ENSG00000116459.11	ENST00000369721.8	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	839.936759524192	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTTTCAAGTTGTATAA	-17	True	NA	16	True	AATAAA	-20	NA	111449464	111461332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111449582_111449836_111449874_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_58580.known	chr2	-	558	3	FSM	ENSG00000116106.12	ENST00000541600.5	558	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGAGAGCTTCACCCAA	NA	False	NA	NA	False	NA	NA	NA	221572358	221564105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_221564395_221568717_221568786_221572157
transcript_58584.known	chr2	-	6761	17	FSM	ENSG00000116120.11	ENST00000281828.8	6761	17	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_12	89.4733724356023	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTATAGTCTTTTGT	-9	True	NA	NA	False	AATAAA	-19	NA	222656092	222566898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_222572023_222599927_222600084_222613810_222613929_222619644_222619738_222623649_222623731_222624271_222624480_222624713_222624776_222628836_222628889_222630112_222630175_222631603_222631675_222633198_222633308_222634390_222634542_222639579_222639696_222640861_222640932_222642850_222643006_222648739_222648796_222656015
transcript_5859.known	chr1	+	2628	7	FSM	ENSG00000116459.11	ENST00000369722.8	2628	7	0	0	0	0	multi-exon	FALSE	canonical	3	2064	junction_4	71.7280744664644	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGTGCTAAGCAAC	-18	True	NA	NA	False	ATTAAA	-18	NA	111449463	111462773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_58598.known	chr2	-	3986	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.34520787991171	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGTTTTCATGAAT	-1	True	NA	2	True	AATAAA	-27	NA	223837582	223755325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
transcript_586.nic	chr1	-	567	2	ISM	ENSG00000231789.3	ENST00000415330.3	978	3	-37	8440	-37	-8440	5prime_fragment	FALSE	canonical	3	82	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGTTGGCGTGATT	NA	False	NA	-7	True	CATAAA	-17	NA	9687610	9680844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_9681136_9687334
transcript_58601.known	chr2	-	4607	12	FSM	ENSG00000085449.15	ENST00000233055.9	4607	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	61.2017392936016	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGCCTAATATCAC	-2	True	NA	-12	True	AATAAA	-18	NA	223945335	223875347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_58606.known	chr2	-	864	5	FSM	ENSG00000085449.15	ENST00000483061.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	60.1638388070442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGCAAACCCTTCCTC	-2	True	NA	NA	False	NA	NA	NA	223945335	223900854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_58611.known	chr2	+	1689	4	FSM	ENSG00000135900.4	ENST00000258383.4	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_2	21.5148527508066	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCATTTTAATTTGATA	10	True	NA	23	True	AATAAA	-23	NA	223957462	223967714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_223957652_223959533_223960003_223963755_223963935_223966862
transcript_58616.known	chr2	-	2594	3	FSM	ENSG00000124019.10	ENST00000389874.3	2594	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATAAGACATTGTG	110	False	NA	NA	False	AATAAA	-18	NA	224401994	224378697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_224380209_224400380_224400506_224401036
transcript_58617.nnic	chr2	-	1671	2	NNC	ENSG00000124019.10	novel	2582	2	NA	NA	-31545	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATAAGACATTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	224433652	224378697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_224380209_224433492
transcript_58618.known	chr2	-	6756	16	FSM	ENSG00000036257.14	ENST00000264414.9	6756	16	0	0	0	0	multi-exon	TRUE	canonical	3	522	junction_15	70.708038204059	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGCAGTTGTGATT	4	True	NA	NA	False	ATTAAA	-17	NA	224585363	224470149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_224474377_224478199_224478346_224481891_224482079_224495831_224495967_224497752_224497850_224500362_224500488_224502964_224503073_224503651_224503823_224505955_224506133_224506857_224507004_224511353_224511583_224513523_224513639_224514611_224514773_224535527_224535642_224557658_224557857_224584943
transcript_58620.known	chr2	+	4883	7	FSM	ENSG00000144468.17	ENST00000341329.7	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	30.7878042232454	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATTTATACTGTCACCA	NA	False	NA	NA	False	AATAAA	-28	NA	226835935	226999215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_226836088_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_58622.known	chr2	-	1047	15	FSM	ENSG00000081052.14	ENST00000643379.1	1047	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAGGAGAAAAAGGTAT	17	True	NA	NA	False	NA	NA	NA	227164453	227102830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_227102849_227103143_227103198_227103971_227104053_227108580_227108623_227108832_227108869_227109223_227109287_227111677_227111714_227114627_227114697_227118644_227118762_227119894_227119940_227121013_227121149_227140160_227140239_227144515_227144559_227147412_227147585_227164395
transcript_58623.known	chr2	+	2186	11	FSM	ENSG00000168958.20	ENST00000353339.7	2186	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	243.259614404035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-28	True	NA	23	True	AATAAA	-16	NA	227325238	227357833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_58630.known	chr2	+	1247	9	FSM	ENSG00000168958.20	ENST00000409616.5	1247	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	242.419058656699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGAAATATAAAAGATT	-5	True	NA	-3	True	NA	NA	NA	227325261	227357151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_58633.known	chr2	+	1921	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	226.539973018008	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-16	True	NA	23	True	AATAAA	-16	NA	227325250	227357833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_58637.nic	chr2	+	1246	8	NIC	ENSG00000168958.20	novel	1247	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	232.318043787795	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGTCTCTGCATT	-34	True	NA	27	True	TATAAA	-16	NA	227325232	227357181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_58639.known	chr2	+	1760	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	218.840730455102	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	1	True	NA	23	True	AATAAA	-16	NA	227325267	227357833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
transcript_5864.nic	chr1	+	1523	9	FSM	ENSG00000116473.15	ENST00000687939.1	5101	9	23	3555	11	0	multi-exon	FALSE	canonical	2	9	junction_1	95.6461577900545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTGTTTTTG	15	True	NA	26	True	ATTAAA	-40	NA	111619799	111713113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111619935_111627469_111627564_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_58643.known	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	194.821425297892	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	9	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_58646.known	chr2	+	1085	7	FSM	ENSG00000168958.20	ENST00000354503.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	73.6223471508482	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCACACCCTGAAAATGT	-17	True	NA	61	True	NA	NA	NA	227325249	227357215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_58657.known	chr2	+	1548	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	204.963021055019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	-8	True	NA	-11	True	TTTAAA	-22	NA	227325258	227357799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_58659.known	chr2	+	647	5	FSM	ENSG00000168958.20	ENST00000524634.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	218.222936466358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAAATACTGTCTCAAC	4	True	NA	-23	True	NA	NA	NA	227325270	227357131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227325428_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_5866.known	chr1	+	5024	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-6	0	6	0	multi-exon	FALSE	canonical	3	166	junction_1	27.7098670998956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	-2	True	NA	8	True	AATAAA	-16	NA	111619782	111716691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_58661.known	chr2	-	5213	6	FSM	ENSG00000135917.16	ENST00000644224.2	5213	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	5.46260011349906	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCCTACTGTGGAGTA	-13	True	NA	-1	True	AATAAA	-24	NA	227718028	227683762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227702168_227702321_227717942
transcript_58662.known	chr2	+	1683	13	FSM	ENSG00000123977.10	ENST00000309931.3	1683	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	2.17306746840088	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTACATGTGTATTT	-20	True	NA	5	True	AATAAA	-15	NA	227871630	227924344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_227871730_227885350_227885424_227889855_227890001_227891254_227891314_227893794_227893918_227898181_227898282_227903001_227903110_227904928_227905036_227906235_227906339_227907137_227907253_227918779_227918857_227921398_227921562_227923933
transcript_58663.known	chr2	+	3120	5	FSM	ENSG00000153832.12	ENST00000373652.7	3120	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.2788110275682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATAATAATCTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	229922301	230013109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_229922610_229932770_229932887_229976240_229976350_229996750_229996924_230010695
transcript_58664.known	chr2	+	2813	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.0757203447796	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTGCCTTATTAC	-2	True	NA	NA	False	ATTAAA	-26	NA	229922502	230013119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
transcript_58667.known	chr2	-	1836	4	FSM	ENSG00000163053.11	ENST00000457406.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACATTTTCCTTTT	16	True	NA	NA	False	TATAAA	-27	NA	230068907	230045656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_230046723_230049760_230049905_230059093_230059367_230068554
transcript_58669.known	chr2	+	629	4	FSM	ENSG00000079263.19	ENST00000538494.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCAGACTGTGGGAGG	4641	False	NA	NA	False	NA	NA	NA	230230413	230238927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_230230529_230237082_230237261_230238212_230238382_230238760
transcript_58670.known	chr2	-	1952	15	FSM	ENSG00000135899.19	ENST00000258382.10	1952	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	2.12011743995083	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGTCCATGTGTTTTA	-9	True	NA	NA	False	AATAAA	-18	NA	230219984	230176474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_230176725_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_5868.known	chr1	+	3600	11	FSM	ENSG00000064703.13	ENST00000369702.5	3600	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	31.840854259897	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTTTGCTTTTTTCCTC	-10	True	NA	NA	False	AATATA	-14	NA	111755900	111768000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_58681.known	chr2	+	2037	6	FSM	ENSG00000135916.16	ENST00000326427.11	2037	6	0	0	0	0	multi-exon	TRUE	canonical	3	3330	junction_2	181.196688711466	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	-10	True	NA	16	True	AATAAA	-17	NA	230864941	230879248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_58687.known	chr2	+	1889	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	1324.88122109116	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	-4	True	NA	15	True	AATAAA	-16	NA	230864947	230879247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_58691.known	chr2	+	3370	26	FSM	ENSG00000173692.14	ENST00000676818.1	3370	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	404.405440121668	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCCAGATGGACAAGAC	NA	False	NA	8	True	AATAAA	-6	NA	231056844	231172741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231166380_231166492_231170565_231170722_231172534
transcript_58692.known	chr2	+	3304	25	FSM	ENSG00000173692.14	ENST00000679095.1	3304	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	308.753981080946	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGATGGACAAGACAT	NA	False	NA	10	True	AATAAA	-8	NA	231056848	231172743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163587_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_58693.known	chr2	+	3323	25	FSM	ENSG00000173692.14	ENST00000308696.11	3323	25	0	0	0	0	multi-exon	FALSE	canonical	3	1330	junction_11	99.8317247366231	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGAGCCAGAGTCTTG	-26	True	NA	37	True	AATAAA	-37	NA	231056866	231172827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_58696.known	chr2	+	3185	24	FSM	ENSG00000173692.14	ENST00000373635.9	3185	24	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_20	301.673661610756	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATGAAATGCCTAAATC	1	True	NA	19	True	AATAAA	-19	NA	231056893	231172809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_58697.known	chr2	+	3442	24	FSM	ENSG00000173692.14	ENST00000431051.6	3442	24	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	314.309517179789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAAGGCCAAGGTGG	-26	True	NA	NA	False	NA	NA	NA	231056866	231173116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_587.known	chr1	+	515	3	FSM	ENSG00000171608.17	ENST00000484851.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTGAATTTTTATAATT	497	False	NA	NA	False	ATTAAA	-17	NA	9688175	9691946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9688314_9691466_9691572_9691674
transcript_58701.known	chr2	+	4089	23	FSM	ENSG00000173692.14	ENST00000676506.1	4089	23	0	0	0	0	multi-exon	FALSE	canonical	3	1330	junction_11	93.7621066563039	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTTACAGAGAACGTAT	-29	True	NA	NA	False	NA	NA	NA	231056863	231167229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870
transcript_58705.nic	chr2	+	2739	22	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-8	1942	7	0	5prime_fragment	FALSE	canonical	3	1330	junction_11	95.9205548069188	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATAAATTGGTGGTCA	NA	False	NA	76	True	AAAAAG	-37	NA	231056855	231165287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199
transcript_58709.nic	chr2	+	2634	21	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-8	3519	7	0	5prime_fragment	FALSE	canonical	3	1330	junction_11	98.2893051150531	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGGAAAAGGTA	NA	False	NA	19	True	NA	NA	NA	231056855	231163710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634
transcript_5871.known	chr1	-	5951	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATTCCCTCTGAA	-11	True	NA	-6	True	AATAAA	-18	NA	111739395	111722063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_111727805_111739185
transcript_58714.known	chr2	+	3199	24	FSM	ENSG00000173692.14	ENST00000619128.5	3199	24	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_17	310.696412707912	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	NA	False	NA	12	True	AATAAA	-12	NA	231056848	231172802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_5872.known	chr1	+	5864	6	FSM	ENSG00000143079.15	ENST00000271277.11	5864	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	18.1173949562292	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTAGTGGTTCTCAAA	-5	True	NA	4	True	AATAAA	-16	NA	112396213	112461164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112396273_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_58722.known	chr2	+	3136	23	FSM	ENSG00000173692.14	ENST00000678679.1	3136	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	319.732833332368	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	NA	False	NA	12	True	AATAAA	-12	NA	231056848	231172802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_58726.known	chr2	+	2148	21	FSM	ENSG00000135931.19	ENST00000682030.1	2148	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	58.8934631347147	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	15	True	NA	-2	True	TTTAAA	-11	NA	231198673	231345181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58727.known	chr2	+	2333	21	FSM	ENSG00000135931.19	ENST00000683575.1	2333	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.6099614158573	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	21	False	NA	16	True	AATAAA	-17	NA	231198752	231345199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58728.known	chr2	+	2091	20	FSM	ENSG00000135931.19	ENST00000683271.1	2091	20	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	52.2617533070386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	-24	True	NA	-2	True	TTTAAA	-11	NA	231198634	231345181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58729.nic	chr2	+	2311	20	NIC	ENSG00000135931.19	novel	2333	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	74.3450814495086	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	17	True	NA	16	True	AATAAA	-17	NA	231198675	231345199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_58737.known	chr2	+	1941	12	FSM	ENSG00000135931.19	ENST00000682027.1	1941	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	74.6962997081023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACCCTGAAGATT	-28	True	NA	NA	False	NA	NA	NA	231198630	231260004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_58738.known	chr2	+	2128	12	FSM	ENSG00000135931.19	ENST00000682233.1	2128	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.6532832349448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATCTCAAACAAAACAAAAC	13	True	NA	NA	False	NA	NA	NA	231198671	231259989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_58741.nic	chr2	+	1998	11	NIC	ENSG00000135931.19	novel	1941	12	NA	NA	-18	138	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	93.641657396695	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTCTGCAGTTGTCT	-46	True	NA	NA	False	AATAAA	-16	NA	231198612	231260142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231259198
transcript_58746.known	chr2	+	2064	20	FSM	ENSG00000135931.19	ENST00000436339.6	2064	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_19	61.5110737051927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTTTAAAATTCAAAAT	-24	True	NA	-23	True	NA	NA	NA	231198634	231345160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231344974
transcript_58747.known	chr2	-	2205	15	FSM	ENSG00000115053.17	ENST00000356936.6	2205	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	1687.71230259382	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	136	False	NA	NA	False	NA	NA	NA	231464353	231455190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457285_231457358_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_58749.known	chr2	-	2720	15	FSM	ENSG00000115053.17	ENST00000676913.1	2720	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1703.4818020748	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	NA	False	NA	73	True	NA	NA	NA	231464551	231454878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231455827_231455905_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_58758.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678828.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	1	44	junction_7	1348.20350771864	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTTACTTCCTAAAGAG	0	True	NA	-18	True	ATTAAA	-19	NA	231464489	231454748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458345_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_58765.known	chr2	-	2978	14	FSM	ENSG00000115053.17	ENST00000453992.6	2978	14	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_13	1348.40720852419	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	3	True	NA	-77	True	AAGAAA	-16	NA	231464180	231454807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231463700
transcript_58766.known	chr2	-	2563	14	FSM	ENSG00000115053.17	ENST00000417652.6	2563	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_13	1330.91608349354	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-24	True	NA	-77	True	AAGAAA	-16	NA	231464207	231454807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464142
transcript_58767.known	chr2	-	2155	14	FSM	ENSG00000115053.17	ENST00000454824.6	2155	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_13	1358.41601544075	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	-16	True	NA	NA	False	NA	NA	NA	231464199	231455190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464159
transcript_58768.known	chr2	-	2653	14	FSM	ENSG00000115053.17	ENST00000679348.1	2653	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1360.91975947003	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-5	True	NA	-77	True	AAGAAA	-16	NA	231464494	231454807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463313_231464335
transcript_5877.known	chr1	-	1780	15	FSM	ENSG00000007341.19	ENST00000490067.5	1780	15	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_14	31.0635457981059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCACCAAATTTTTCTG	506	False	NA	-103	True	NA	NA	NA	112619189	112525985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616845_112618908
transcript_58773.known	chr2	-	2674	14	FSM	ENSG00000115053.17	ENST00000678246.1	2674	14	0	0	0	0	multi-exon	TRUE	canonical	1	39	junction_1	1339.46835253978	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTGTTACTTCCTAAA	NA	False	NA	-21	True	ATTAAA	-16	NA	231464518	231454751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455262_231455457_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_588.nic	chr1	-	871	3	ISM	ENSG00000178585.15	ENST00000377256.1	451	5	6096	-550	6096	0	3prime_fragment	FALSE	canonical	3	697	junction_1	1.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGTTTGTGTTTGA	5900	False	NA	-5	True	NA	NA	NA	9872080	9850108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_9850777_9871186_9871278_9871968
transcript_58803.known	chr2	-	4237	11	FSM	ENSG00000115053.17	ENST00000678729.1	4237	11	0	0	0	0	multi-exon	FALSE	canonical	3	3985	junction_5	508.256195240156	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	NA	False	NA	73	True	NA	NA	NA	231464551	231454878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_58832.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678405.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1359.31239143723	2960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	NA	False	NA	73	True	NA	NA	NA	231464551	231454878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231455268_231455400_231455625_231456009_231456160_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_58833.nnic	chr2	-	1779	5	Fusion	ENSG00000283491.1_ENSG00000181798.4	novel	1334	3	NA	NA	2	-4997	multi-exon	FALSE	canonical	3	4	junction_1	7.72576857018122	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGACTCCATGGCCATG	-18	True	NA	-4	True	AATAAA	-28	NA	231514383	231502086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr2_-_231503205_231507168_231507256_231509177_231509344_231513526_231513633_231514081
transcript_58837.known	chr2	-	1281	3	FSM	ENSG00000181798.4	ENST00000313064.4	1325	3	44	0	33	0	multi-exon	FALSE	canonical	3	10	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTTGTGGCTCATAC	13	True	NA	NA	False	AATAAA	-13	NA	231514352	231508424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231509344_231513526_231513633_231514096
transcript_58838.known	chr2	-	3221	3	FSM	ENSG00000171596.7	ENST00000305141.5	3221	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAACAGTGGCATGTTT	-6	True	NA	NA	False	ATTAAA	-24	NA	231530445	231523186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231525426_231528122_231529018_231530358
transcript_58839.known	chr2	+	784	5	FSM	ENSG00000187514.17	ENST00000466801.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	10963.6372243658	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCCAAACCATGAGAAT	234	False	NA	154	True	NA	NA	NA	231706894	231713013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231707229_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_58840.known	chr2	+	1108	5	FSM	ENSG00000187514.17	ENST00000448874.5	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	10964.9216709469	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGATGTATGTGTGA	453	False	NA	39	True	NA	NA	NA	231707629	231713465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231707836_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_58841.known	chr2	+	1215	5	FSM	ENSG00000187514.17	ENST00000409115.8	1215	5	0	0	0	0	multi-exon	FALSE	canonical	3	22780	junction_2	1810.21946183329	7339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTTTCAG	-1	True	NA	14	True	AATAAA	-45	NA	231708524	231713551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_58842.known	chr2	+	933	5	FSM	ENSG00000187514.17	ENST00000409683.5	933	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	11274.1512624011	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAATGACAACAGAAA	10	True	NA	NA	False	NA	NA	NA	231708535	231713289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712451_231712517_231712803
transcript_58843.known	chr2	+	1635	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	0	0	0	0	multi-exon	FALSE	canonical	3	26303	junction_2	408.280132588725	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	4	True	NA	-31	True	NA	NA	NA	231708529	231713506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
transcript_58849.known	chr2	+	2051	8	FSM	ENSG00000144524.18	ENST00000410017.5	2051	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	397.432011898429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCGTGTCAATATTTGT	-2	True	NA	10	True	AATACA	-20	NA	231786444	231808723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801139_231801208_231807486
transcript_58850.known	chr2	+	2563	8	FSM	ENSG00000144524.18	ENST00000373608.7	2563	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	401.538724083712	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	1	True	NA	10	True	AATAAA	-22	NA	231786447	231809253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801154_231801208_231807486
transcript_58853.known	chr2	+	1103	7	FSM	ENSG00000144524.18	ENST00000410024.5	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	319.751292239592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCAGTGAGTTCCAGA	-21	True	NA	NA	False	NA	NA	NA	231781670	231807724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231781884_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_58855.nnic	chr2	+	2010	7	NNC	ENSG00000144524.18	novel	2513	7	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_3	347.873380540807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCGTGTCAATATTTG	-13	True	NA	9	True	AATACA	-19	NA	231786433	231808722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_231786539_231788554_231788733_231791732_231791809_231794245_231794352_231796105_231796309_231798858_231798965_231807486
transcript_58857.known	chr2	+	2513	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_3	81.7638877092652	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	-2	True	NA	10	True	AATAAA	-22	NA	231786444	231809253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_58860.known	chr2	+	2442	6	FSM	ENSG00000144524.18	ENST00000413197.5	2442	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	351.730237540078	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCATATCCTCATTGGAA	-13	True	NA	4	True	AATAAA	-16	NA	231786433	231809247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231786539_231788554_231788733_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_58863.known	chr2	-	1140	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	12.3970762682174	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCACTGCTTTTATCT	1	True	NA	-8	True	ATTAAA	-32	NA	231781282	231732432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
transcript_58864.nnic	chr2	-	1074	5	NNC	ENSG00000156973.14	novel	1140	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	117.69770600993	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCACTGCTTTTATCT	-1	True	NA	-8	True	ATTAAA	-32	NA	231781284	231732432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739203_231781146
transcript_58867.known	chr2	-	672	4	FSM	ENSG00000156973.14	ENST00000409772.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	133.93613735243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTAGGTAACCAGAT	-8	True	NA	NA	False	NA	NA	NA	231781291	231732803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231733034_231738012_231738139_231739099_231739189_231781064
transcript_5887.known	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_9	99.3668847140625	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	5	True	NA	27	True	AATATA	-18	NA	112619831	112671616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
transcript_58871.known	chr2	-	996	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGGAATTCCAGCCC	1	True	NA	NA	False	NA	NA	NA	231781282	231778722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_231779501_231781064
transcript_58872.known	chr2	+	3366	21	FSM	ENSG00000144535.20	ENST00000325385.12	3366	21	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_20	6.87459089691888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCGCCCCCATCA	-8	True	NA	18	True	ATTAAA	-19	NA	231961712	232337192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336468
transcript_58873.nnic	chr2	+	2143	15	NNC	ENSG00000144535.20	novel	3366	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.1232030190807	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTGTAGGGCGCCTC	4	True	NA	18	True	AATAAA	-19	NA	231961724	232336977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_231961766_232014834_232014980_232163556_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336468
transcript_58876.known	chr2	+	3525	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	596.299506993605	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTCGTGGACTTGTC	-2	True	NA	18	True	AATAAA	-18	NA	232550682	232583642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
transcript_58882.known	chr2	+	967	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_6	142.384943804541	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	4	True	NA	14	True	AATAAA	-14	NA	232550688	232569210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_58883.known	chr2	+	3448	7	FSM	ENSG00000135930.15	ENST00000409098.5	3448	7	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_6	405.774020306322	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCGTGGACTTGTCAA	-2	True	NA	20	True	AATAAA	-20	NA	232550682	232583644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_58890.known	chr2	+	1014	6	FSM	ENSG00000135930.15	ENST00000409495.6	2693	6	0	1679	0	322	multi-exon	FALSE	canonical	3	1269	junction_5	55.1274886059577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTTTCTTGCTG	4	True	NA	NA	False	AATGAA	-8	NA	232550688	232567527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077
transcript_58891.known	chr2	+	797	6	FSM	ENSG00000135930.15	ENST00000409322.5	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	459.325418412698	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	7	True	NA	-18	True	NA	NA	NA	232550691	232569178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_58892.known	chr2	+	604	6	FSM	ENSG00000135930.15	ENST00000409394.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	552.397827656844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATAATCCTTTTCTGTA	19	True	NA	NA	False	AATACA	-29	NA	232550703	232580956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_58895.known	chr2	+	1372	5	FSM	ENSG00000135930.15	ENST00000409167.8	2550	5	0	1178	0	815	multi-exon	FALSE	canonical	3	171	junction_2	513.138139295843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCTCCATCTGTAAAG	4	True	NA	NA	False	NA	NA	NA	232550688	232568020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077
transcript_58897.known	chr2	+	1110	3	FSM	ENSG00000135930.15	ENST00000498242.5	1110	3	0	0	0	0	multi-exon	FALSE	canonical	3	1401	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGAAATCTCTAATAA	6	True	NA	NA	False	CATAAA	-25	NA	232550690	232558824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232550745_232556415_232556531_232557883
transcript_58899.nic	chr2	+	3406	24	NIC	ENSG00000204120.16	novel	7878	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	31.6300687264042	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAAAACAACG	NA	False	NA	NA	False	NA	NA	NA	232697304	232844544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368
transcript_589.nic	chr1	-	530	3	ISM	ENSG00000178585.15	ENST00000377256.1	451	5	6096	-209	6096	0	3prime_fragment	FALSE	canonical	3	697	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATTTTTATTTCTGA	5900	False	NA	-14	True	AAGAAA	-34	NA	9872080	9850449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_9850777_9871186_9871278_9871968
transcript_58902.known	chr2	+	7816	29	FSM	ENSG00000204120.16	ENST00000373563.9	7816	29	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	23.739739996513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	-2	True	NA	NA	False	ATTAAA	-24	NA	232697330	232860605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_58912.nic	chr2	+	1320	12	NIC	ENSG00000204120.16	novel	5976	31	NA	NA	-1	-3657	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	60.1487137734053	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAGGAGAGAAAA	NA	False	NA	NA	False	AATGAA	-27	NA	232697306	232791132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_58913.nic	chr2	+	1348	12	NIC	ENSG00000204120.16	novel	7816	29	NA	NA	-3	-3657	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	65.9353552684761	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAGGAGAGAAAA	-6	True	NA	NA	False	AATGAA	-27	NA	232697326	232791132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_232697393_232703423_232703490_232724573_232724692_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_58919.nic	chr2	+	1186	10	NIC	ENSG00000204120.16	novel	7878	30	NA	NA	0	-3657	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	40.5520546434144	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAGGAGAGAAAA	NA	False	NA	NA	False	AATGAA	-27	NA	232697304	232791132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_58920.nic	chr2	+	1168	10	ISM	ENSG00000204120.16	ENST00000409196.7	5747	28	-33	67495	0	-3657	5prime_fragment	FALSE	canonical	2	9	junction_8	63.5775020383162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAGGAGAGAAAA	NA	False	NA	NA	False	AATGAA	-27	NA	232697304	232791132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790715_232790916_232791007
transcript_58923.known	chr2	+	3211	5	FSM	ENSG00000204120.16	ENST00000475359.6	3211	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.2222781130949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTGGAAAGTAAAGTT	-2	True	NA	NA	False	AATAAA	-22	NA	232697330	232738681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735752
transcript_58924.known	chr2	+	1116	5	FSM	ENSG00000204120.16	ENST00000489328.1	1116	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.9652666073281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTATAGTTACATCTT	13	False	NA	117	True	TATAAA	-16	NA	232697382	232736648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735762
transcript_58925.known	chr2	+	766	5	FSM	ENSG00000204120.16	ENST00000476995.5	766	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	50.5785280529199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGAACATGTTAACCTA	NA	False	NA	NA	False	NA	NA	NA	232697298	232736214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232703423_232703490_232734416_232734487_232735154_232735239_232735762
transcript_58927.known	chr2	+	685	4	FSM	ENSG00000204120.16	ENST00000492910.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	60.3453026801221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCTGTACTTGTTTT	-3	True	NA	NA	False	NA	NA	NA	232697329	232736234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232735762
transcript_58928.nic	chr2	-	1729	8	NIC	ENSG00000066248.15	novel	3184	15	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	5.41728149310244	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGAAGGTCTACTCTT	NA	False	NA	-20	True	AATAAA	-1	NA	232891013	232878700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232890933
transcript_58930.known	chr2	+	3301	18	FSM	ENSG00000085978.22	ENST00000392021.7	3301	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	39.7741896104691	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	7	True	NA	28	True	AATAAA	-30	NA	233251672	233295674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_233251941_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_58931.known	chr2	+	3213	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	19.9655954081014	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	3	True	NA	28	True	AATAAA	-30	NA	233251705	233295674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_58932.known	chr2	+	2915	14	FSM	ENSG00000085978.22	ENST00000347464.9	2915	14	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	37.738746902242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTTGGTGATTATTT	NA	False	NA	27	True	AATAAA	-29	NA	233251570	233295673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_233251943_233256101_233256196_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_58934.nic	chr2	-	3566	30	ISM	ENSG00000085982.15	ENST00000678225.2	5695	32	0	10061	0	0	5prime_fragment	FALSE	canonical	3	12	junction_13	5.85699577636656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTGCAAGGGGCACCG	-11	True	NA	NA	False	AAAAAG	-14	NA	233566782	233485586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_233485627_233485766_233485978_233488238_233488305_233489364_233489484_233491166_233491262_233493424_233493552_233496757_233496833_233498547_233498613_233499878_233499916_233510048_233510136_233511708_233511798_233512568_233512623_233519613_233519672_233520990_233521115_233523169_233523490_233524491_233524563_233525477_233525563_233527406_233527579_233529430_233529513_233533478_233533780_233540661_233540770_233542267_233542364_233549100_233549230_233551375_233551520_233554379_233554527_233556854_233557020_233559810_233559925_233562735_233562804_233565355_233565574_233566683
transcript_58936.known	chr2	-	933	5	FSM	ENSG00000085982.15	ENST00000484528.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	3.08220700148449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGGCCTCATGTGAGA	-11	True	NA	NA	False	AATAGA	-25	NA	233566782	233556585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233557020_233559810_233559925_233562735_233562804_233565355_233565574_233566683
transcript_58939.known	chr2	-	3157	9	FSM	ENSG00000123485.12	ENST00000411486.7	3157	9	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_6	41.5600093238681	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGGGTTTTTTTT	-2	True	NA	-4	True	AGTAAA	-18	NA	233854535	233836701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233849762_233849860_233852564_233852621_233853843_233853911_233854383
transcript_5894.known	chr1	+	739	3	FSM	ENSG00000116489.13	ENST00000485542.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_1	45	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAATCTAAACTTG	21	False	NA	NA	False	NA	NA	NA	112619804	112650013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112619884_112647209_112647274_112649417
transcript_58945.known	chr2	-	3027	7	FSM	ENSG00000123485.12	ENST00000432087.5	3027	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	192.297006968098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTTTTTTTT	4	True	NA	-3	True	AGTAAA	-19	NA	233854566	233836700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233852564_233852621_233853843_233853911_233854383
transcript_58946.nic	chr2	-	1551	3	ISM	ENSG00000123485.12	ENST00000453122.1	634	7	-45	9218	-14	-7109	5prime_fragment	FALSE	canonical	3	505	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGTTAGAAATGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	233854580	233851333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_233852621_233853843_233853911_233854383
transcript_58948.known	chr2	-	2032	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868444	233865436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_233867351_233868326
transcript_58949.known	chr2	-	4013	1	FSM	ENSG00000188042.8	ENST00000390645.2	4013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGGGAGATTTTCTGT	12	True	NA	-9	True	AATAAA	-18	NA	234497053	234493040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_234493000_234497100
transcript_58950.nic	chr2	-	1887	6	NIC	ENSG00000235726.7	novel	1403	7	NA	NA	-32	540	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	1.74355957741627	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTCCGGAGACTG	NA	False	NA	NA	False	NA	NA	NA	234888834	234816708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_234817379_234824932_234825114_234833836_234834029_234834121_234834739_234887776_234887818_234888648
transcript_58952.known	chr2	-	3215	19	FSM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	7.26079443328821	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-10	True	NA	-4	True	AATAAA	-16	NA	236507476	236324150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_58955.nic	chr2	-	1402	8	ISM	ENSG00000132321.17	ENST00000254653.9	3336	20	-33	95028	-30	-26850	5prime_fragment	FALSE	canonical	3	18	junction_2	4.96929346597888	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAGAAAGGAACAAAGGA	-1	True	NA	NA	False	AAAAAG	-43	NA	236507565	236419178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_5896.known	chr1	-	848	3	FSM	ENSG00000007341.19	ENST00000477332.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGAGCCTTTGTTTA	596	False	NA	NA	False	AAGAAA	-31	NA	112619099	112607103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112607598_112610840_112611004_112618908
transcript_58960.known	chr2	+	713	2	FSM	ENSG00000144476.6	ENST00000447924.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGAGCTGGTCTCCGTTG	-6	True	NA	NA	False	NA	NA	NA	236567786	236581097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_236567842_236580439
transcript_58962.known	chr2	+	2015	2	FSM	ENSG00000144476.6	ENST00000272928.4	2015	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGTCTCAGTTTTC	0	True	NA	43	True	AATAAA	-20	NA	236569824	236582354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_236569925_236580439
transcript_58970.known	chr2	+	1654	9	FSM	ENSG00000198612.11	ENST00000392008.6	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	465.647868565937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTTAAGGTTATAACAG	-34	True	NA	-51	True	NA	NA	NA	237085881	237098618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237086043_237086731_237086797_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_58974.known	chr2	+	3438	8	FSM	ENSG00000198612.11	ENST00000354371.7	3438	8	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	57.2199479987495	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTCCAATGTGTTCT	-27	True	NA	NA	False	AATAAA	-25	NA	237085888	237100474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237086043_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_5898.known	chr1	-	752	2	FSM	ENSG00000007341.19	ENST00000470683.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	18	True	NA	0	True	AATAAA	-21	NA	112619111	112610454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112611004_112618908
transcript_58982.known	chr2	+	3744	16	FSM	ENSG00000115648.14	ENST00000264605.8	3744	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	15.3701008454727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTAGCAGATGGCTAT	-34	True	NA	NA	False	AATAAA	-27	NA	237487250	237555322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237534563_237534648_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_58985.known	chr2	+	2332	15	FSM	ENSG00000115648.14	ENST00000338530.8	2332	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	9.05313115300278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	-34	True	NA	24	True	AAAAAG	-21	NA	237487250	237553994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_58986.nic	chr2	+	2182	14	NIC	ENSG00000115648.14	novel	2332	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	13.4172899141016	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	-40	True	NA	24	True	AAAAAG	-21	NA	237487244	237553994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_5899.known	chr1	+	3641	21	FSM	ENSG00000155363.19	ENST00000413052.6	3641	21	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	142.834134575738	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCTCCTCTGCCTGGC	3705	False	NA	39	True	AAGAAA	-40	NA	112674420	112700746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112674730_112674831_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_58990.known	chr2	+	2031	13	FSM	ENSG00000115648.14	ENST00000409373.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	17.7568453154144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	-9	True	NA	24	True	AAAAAG	-21	NA	237487275	237553994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_58995.known	chr2	-	1077	5	FSM	ENSG00000124839.13	ENST00000409822.1	1077	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	356.513236079672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCAGCCTCTGGACAG	8212	False	NA	NA	False	NA	NA	NA	237590780	237574737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237590466
transcript_59.known	ERCC-00170	+	1007	1	FSM	ERCC-00170A	DQ516773	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00170_+_0_1000
transcript_5900.known	chr1	+	3552	21	FSM	ENSG00000155363.19	ENST00000369645.6	3380	21	-172	0	66	0	multi-exon	FALSE	canonical	3	194	junction_1	122.387856832285	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	8	True	NA	32	True	AAGAAA	-33	NA	112674486	112700739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112674730_112674847_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_59000.known	chr2	-	1603	6	FSM	ENSG00000124839.13	ENST00000264601.8	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_4	165.486434489356	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-5	True	NA	-12	True	ATTAAA	-14	NA	237590734	237574325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237585997_237586158_237590466
transcript_59001.known	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	328.473438804418	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	14	True	NA	-41	True	NA	NA	NA	237590715	237574354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
transcript_59002.known	chr2	-	1792	5	FSM	ENSG00000124839.13	ENST00000392001.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	331.125731407271	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAGAAGTTTTTGAGG	7921	False	NA	-8	True	ATTAAA	-18	NA	237591071	237574321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237585997_237586158_237590466
transcript_59007.known	chr2	+	857	3	FSM	ENSG00000132329.11	ENST00000404910.6	857	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTACCTCTGGAAAG	7	True	NA	-92	True	NA	NA	NA	237858892	237912010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237859128_237877223_237877363_237911527
transcript_59008.known	chr2	+	2902	19	FSM	ENSG00000258984.5	ENST00000449891.5	2902	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	159.842679215426	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	-20	True	NA	15	True	AATAAA	-16	NA	237967013	238099412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238030555_238030614_238032221_238032255_238035877_238035941_238057157_238057251_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_59009.known	chr2	+	984	11	FSM	ENSG00000184182.19	ENST00000417231.5	984	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	162.551653329026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGGGCTTCTGAAGA	-8	True	NA	8	True	CATAAA	-14	NA	237967025	238041542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237973648_237973748_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_5901.known	chr1	+	3383	20	FSM	ENSG00000155363.19	ENST00000357443.2	3383	20	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_4	98.5213111639436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAACAAAATCTTGTTC	11	False	NA	3	True	AAGAAA	-4	NA	112674744	112700710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_59013.known	chr2	+	2137	10	FSM	ENSG00000184182.19	ENST00000272930.9	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_5	27.2591586149511	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGGGTGGCCCCTGG	-20	True	NA	NA	False	NA	NA	NA	237967013	238042782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_59018.known	chr2	+	760	9	FSM	ENSG00000184182.19	ENST00000455999.5	760	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	136.514651228357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCATCTTCATGACTG	-16	True	NA	-54	True	NA	NA	NA	237967017	238041480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_59020.known	chr2	+	1242	9	FSM	ENSG00000184182.19	ENST00000441728.6	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	125.840610992636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAATGTAAGTATAT	NA	False	NA	-7	True	NA	NA	NA	237966944	238041886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_59023.known	chr2	+	924	9	FSM	ENSG00000184182.19	ENST00000409953.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	136.622598332048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATGCAAAATCTCT	47	False	NA	20	True	NA	NA	NA	237967080	238041770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_59024.known	chr2	+	803	8	FSM	ENSG00000184182.19	ENST00000433241.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	150.281368758467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGGCTGTTGGTGAAA	46	False	NA	11	True	NA	NA	NA	237967079	238041605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238035877_238035941_238041287
transcript_59028.known	chr2	+	2450	12	FSM	ENSG00000132330.18	ENST00000254663.12	2450	12	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_11	75.2750329027653	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	-23	True	NA	16	True	AATAAA	-17	NA	238061000	238099413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_59030.nic	chr2	+	1490	10	ISM	ENSG00000132330.18	ENST00000254663.12	2450	12	-1	4564	-1	0	5prime_fragment	FALSE	canonical	3	290	junction_9	59.1528674570816	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	-24	True	NA	8	True	ATTAAA	-18	NA	238060999	238094849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
transcript_59035.known	chr2	+	1774	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	32.5914725293696	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	7	True	NA	36	True	NA	NA	NA	238061030	238092083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
transcript_59039.nic	chr2	+	1674	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	-1	-24	combination_of_known_junctions	FALSE	canonical	3	49	junction_6	148.43591958223	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGCTACATTTACT	-24	True	NA	12	True	NA	NA	NA	238060999	238092059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_59045.known	chr2	+	458	3	FSM	ENSG00000132330.18	ENST00000497256.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGCTACATTTTCA	NA	False	NA	5	True	AATAAA	-17	NA	238060965	238068231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064
transcript_59047.known	chr2	+	770	2	FSM	ENSG00000132330.18	ENST00000487197.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGATGATGAACTAAAT	13	False	NA	NA	False	GATAAA	-13	NA	238061112	238065095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356
transcript_59048.known	chr2	+	807	4	FSM	ENSG00000132330.18	ENST00000416757.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_3	10.6562449087639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACGCCTGCAAATAGGC	-9	True	NA	NA	False	AATAAA	-16	NA	238061090	238069836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296
transcript_5905.known	chr1	-	1028	6	FSM	ENSG00000155366.17	ENST00000369638.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_4	338.937752397103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTTTATACACTTCTG	-9	True	NA	NA	False	NA	NA	NA	112707135	112701274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705052_112705169_112707077
transcript_59050.known	chr2	-	1455	12	FSM	ENSG00000132323.9	ENST00000254654.8	1455	12	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_8	30.2067257575484	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	18	False	238203713	-3	True	AATAAA	-22	NA	238203695	238170401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194804_238194871_238203498
transcript_59057.nnic	chr2	+	1336	5	NNC	ENSG00000065802.12	novel	6891	5	NA	NA	-2	269	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	61.4791631367897	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGGGAGTTTCGTAAG	-33	True	NA	-40	True	ATTAAA	-18	NA	238427001	238446920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr2_+_238427120_238433553_238433696_238435710_238435864_238444341_238444728_238446383
transcript_59058.known	chr2	+	6891	5	FSM	ENSG00000065802.12	ENST00000264607.9	6891	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.0242493430549	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGTGTTCTGCCTC	-1	True	NA	18	True	AATAAA	-24	NA	238426926	238452250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238427120_238433553_238433696_238435710_238436014_238444341_238444728_238446383
transcript_5906.known	chr1	-	888	6	FSM	ENSG00000155366.17	ENST00000369637.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	318.307147265028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCCCTTTGACCTTCCC	1	True	NA	NA	False	NA	NA	NA	112707125	112701312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705124_112707077
transcript_59061.known	chr2	+	878	4	FSM	ENSG00000065802.12	ENST00000409297.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	50.2084543567006	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAAGATGTCCTCGTAG	-31	True	NA	-84	True	NA	NA	NA	238427003	238446617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_238427120_238433553_238433696_238444341_238444728_238446383
transcript_59063.known	chr2	-	5088	11	FSM	ENSG00000130414.13	ENST00000677764.1	5088	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	261.807352837922	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTTTTTAATGAGAC	-3	True	NA	-21	True	NA	NA	NA	240025389	239957390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240000182_240000388_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_59064.known	chr2	-	1535	11	FSM	ENSG00000130414.13	ENST00000620965.5	1535	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	264.789274707266	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCCATCGTACGTCTA	-5	True	NA	-19	True	AATAAA	-16	NA	240025342	239960739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240012486_240012535_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_59068.known	chr2	-	4855	10	FSM	ENSG00000130414.13	ENST00000252711.7	4855	10	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	52.9947586506859	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTGGTGATTATATT	-5	True	NA	-2	True	AATAAA	-17	NA	240025342	239957371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_59069.known	chr2	-	4798	10	FSM	ENSG00000130414.13	ENST00000678914.1	4798	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	209.222782792664	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATACCTGGTGATTATA	-3	True	NA	-4	True	AATAAA	-15	NA	240025389	239957373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014840_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_5907.known	chr1	-	1026	6	FSM	ENSG00000155366.17	ENST00000369632.6	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	317.058101930861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCCCTCCCTTCACAG	8396	False	NA	NA	False	GGGGCT	-35	NA	112707079	112701519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706731
transcript_59070.known	chr2	-	1580	10	FSM	ENSG00000130414.13	ENST00000444548.6	1580	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	208.720972699066	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTAATGTCTTTGT	-3	True	NA	-25	True	NA	NA	NA	240025340	239969220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239969763_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_59071.known	chr2	-	2509	10	FSM	ENSG00000130414.13	ENST00000448880.6	2509	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.633542693487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATATACACATATTTAT	-3	True	NA	NA	False	AATAAA	-12	NA	240025389	239972239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239973662_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_59075.known	chr2	-	1332	9	FSM	ENSG00000130414.13	ENST00000679158.1	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	219.250106898492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTGGTTTCAGCGCT	-3	True	NA	-112	True	AAAACA	-32	NA	240025389	239960832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_59076.known	chr2	-	4685	8	FSM	ENSG00000130414.13	ENST00000677155.1	4685	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	235.940324520193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTTTAATGAGACTATA	-3	True	NA	-17	True	AATAAA	-2	NA	240025389	239957386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_5908.known	chr1	-	1117	6	FSM	ENSG00000155366.17	ENST00000339083.12	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	289.285602821848	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-1	True	NA	-34	True	AATAAA	-16	NA	112707127	112701130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112707077
transcript_59080.known	chr2	-	418	3	FSM	ENSG00000172428.11	ENST00000607357.2	418	3	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_2	143	958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-6	True	NA	-24	True	ATTAAA	-15	NA	240136305	240130827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_240131089_240133932_240134006_240136221
transcript_59081.nic	chr2	+	858	5	ISM	ENSG00000063660.9	ENST00000495100.1	3525	7	6433	0	-907	0	3prime_fragment	FALSE	canonical	3	169	junction_4	32.86335345031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTCAGCCTGGAGA	5561	False	NA	5	True	AATACA	-16	NA	240464619	240466358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_59082.known	chr2	+	3719	9	FSM	ENSG00000063660.9	ENST00000264039.7	3719	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	34.1796723214252	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCGAGGCCTCGGG	-23	True	NA	22	True	AATAAA	-15	NA	240435662	240468076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_59083.nic	chr2	-	1043	10	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-5	8055	-3	5461	5prime_fragment	FALSE	canonical	3	225	junction_1	25.7164020293145	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGGCTTCCTTCAGCC	-7	True	NA	NA	False	NA	NA	NA	240820222	240782589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_59084.nic	chr2	-	1052	10	ISM	ENSG00000130294.18	ENST00000428768.2	1426	15	-80	11614	0	5461	5prime_fragment	FALSE	canonical	0	0	junction_9	86.3069457743054	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGGCTTCCTTCAGCC	11	True	NA	NA	False	NA	NA	NA	240821025	240782589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820915
transcript_59086.nic	chr2	-	1026	9	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-5	8508	-3	5008	5prime_fragment	FALSE	canonical	3	232	junction_2	23.7012657889827	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCCCGGCCCGGCTT	-7	True	NA	-10	True	NA	NA	NA	240820222	240783042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_-_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_59087.known	chr2	-	4524	7	FSM	ENSG00000122085.17	ENST00000614476.4	4524	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	36.5270067514739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACATGTCAGTGCTAGA	5	True	NA	36	True	AATAAA	-13	NA	241102295	241087098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241095129_241096439_241097242_241097428_241099395_241099895_241102252
transcript_59092.known	chr2	-	3993	5	FSM	ENSG00000122085.17	ENST00000464344.6	3993	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	26.0480325552622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGCTTCTAAAATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	241102332	241072168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241075683_241089187_241089366_241089979_241090045_241094276_241094433_241102252
transcript_59095.known	chr2	-	2626	5	FSM	ENSG00000122085.17	ENST00000455202.6	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	24.8445164976097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTCATGTGATTTGTAA	NA	False	NA	-40	True	ATTAAA	-12	NA	241102331	241087224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241097242_241097428_241102252
transcript_59099.known	chr2	-	614	4	FSM	ENSG00000122085.17	ENST00000476564.5	614	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	25.0377492776186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGGGAAATGCTGGCT	-20	True	NA	NA	False	NA	NA	NA	241102320	241089040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241102252
transcript_59103.known	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3648246606609	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	13	True	NA	-16	True	AATAAA	-16	NA	241102287	241095570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
transcript_59104.known	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	45.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	1	True	NA	NA	False	NA	NA	NA	241102299	241095868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241096439_241097242_241097428_241102252
transcript_59105.nnic	chr2	-	1447	3	NIC	ENSG00000122085.17	novel	1587	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	43	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	NA	False	NA	-16	True	AATAAA	-16	NA	241102332	241095570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_241096439_241099395_241099895_241102252
transcript_59106.known	chr2	-	4540	18	FSM	ENSG00000115687.14	ENST00000234040.9	4540	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	36.3397082330564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTGGATGTTGTGA	-2	True	NA	-5	True	ATTAAA	-24	NA	241149472	241106098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115042_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_59113.known	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	95.0451484659453	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	-13	True	NA	21	True	TATAAA	-18	NA	241150466	241183652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_59115.known	chr2	+	959	9	FSM	ENSG00000115685.15	ENST00000423280.5	959	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	161.288900346552	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCGGCAGATCGATGC	24	True	NA	NA	False	NA	NA	NA	241149612	241182784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_59116.known	chr2	+	1009	9	FSM	ENSG00000115685.15	ENST00000404405.7	1009	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	178.714113530521	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	738	False	NA	18	True	AATAAA	-19	NA	241150417	241167174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158532_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_59117.known	chr2	+	965	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	97.3420997051122	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	0	True	NA	18	True	AATAAA	-19	NA	241150479	241167174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_5912.known	chr1	-	1355	5	FSM	ENSG00000155366.17	ENST00000369642.7	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_4	132.524290226358	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	8041	False	NA	-34	True	AATAAA	-16	NA	112707434	112701130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112707077
transcript_59121.known	chr2	+	1954	9	FSM	ENSG00000115685.15	ENST00000272983.12	1954	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	163.485043276136	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGCCGTTGCAAT	17	False	NA	-12	True	AATAAA	-40	NA	241149657	241182985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_59123.known	chr2	+	883	8	FSM	ENSG00000115685.15	ENST00000402734.5	883	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	174.676026648519	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTTGTTTTTTTCT	3	True	NA	16	True	AATAAA	-17	NA	241149591	241167172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_59128.known	chr2	+	820	8	FSM	ENSG00000115685.15	ENST00000401987.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	177.024960767384	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	16	True	NA	18	True	AATAAA	-19	NA	241150495	241167174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_59134.known	chr2	-	4326	18	FSM	ENSG00000115687.14	ENST00000358649.8	4326	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	52.3916578583727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGAAGGCATGAGTG	836	False	NA	-13	True	ATTAAA	-17	NA	241149435	241106296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115021_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_59135.known	chr2	+	2196	2	FSM	ENSG00000146205.15	ENST00000487192.1	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCCTTGGAGTTCTA	NA	False	NA	10	True	NA	NA	NA	241218184	241225184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241218382_241223185
transcript_59139.known	chr2	-	6372	28	FSM	ENSG00000115677.18	ENST00000391975.5	6372	28	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_27	231.316047550954	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCGCCTGTGTGTTCT	NA	False	NA	-4	True	AATAAA	-41	NA	241272886	241227263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241272760
transcript_59140.known	chr2	-	4489	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_27	201.263771265826	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	424	False	NA	NA	False	AATAAA	-26	NA	241315292	241229211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
transcript_59141.known	chr2	-	6322	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_27	210.721616003919	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGCTGGGACTCAT	-10	True	NA	-31	True	AATAAA	-14	NA	241315672	241227290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_5915.known	chr1	-	702	5	FSM	ENSG00000215866.9	ENST00000449572.2	702	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1491.89309268459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCACTACCTACCCAAAT	4286	False	NA	-139	True	NA	NA	NA	112849777	112820289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112840487_112840581_112849679
transcript_59163.known	chr2	+	3446	14	FSM	ENSG00000168385.18	ENST00000616972.4	3446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1411.51329258634	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	-5	True	NA	NA	False	AATAAA	-20	NA	241315860	241354024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241316421_241316556_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_59169.known	chr2	+	3333	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1434.56164056889	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	4	True	NA	NA	False	AATAAA	-23	NA	241315927	241354027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_5917.known	chr1	-	767	4	FSM	ENSG00000215866.9	ENST00000433505.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1454.33635113141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	4248	False	NA	-19	True	AATAAA	-23	NA	112849815	112820169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112849679
transcript_59174.known	chr2	+	3701	13	FSM	ENSG00000168385.18	ENST00000391973.6	3701	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	1077.97444762027	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	-5	True	NA	NA	False	AATAAA	-20	NA	241315099	241354024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315611_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_59183.known	chr2	+	3251	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	312.962324676097	2481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	1	True	NA	NA	False	AATAAA	-23	NA	241315924	241354027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_59199.known	chr2	+	3267	12	FSM	ENSG00000168385.18	ENST00000407971.5	3267	12	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	1125.52503818007	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	17	False	NA	NA	False	AATAAA	-23	NA	241315882	241354027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_59218.known	chr2	+	749	5	FSM	ENSG00000168385.18	ENST00000475474.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	442.889658944528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTACATCCTTTCTAT	9	False	NA	NA	False	TATAAA	-41	NA	241315874	241336381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974
transcript_59220.known	chr2	+	839	3	FSM	ENSG00000006607.14	ENST00000479427.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	34	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTAGTACTTTAAAAAT	9	True	NA	NA	False	NA	NA	NA	241356298	241395984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241356389_241373083_241373291_241395442
transcript_59222.known	chr2	+	2580	18	FSM	ENSG00000006607.14	ENST00000373287.8	2580	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	19.1001730095971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATACTGTAGTCATCT	7	True	NA	6	True	AATATA	-22	NA	241356296	241466030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241465459
transcript_59224.known	chr2	-	4515	12	FSM	ENSG00000115694.15	ENST00000316586.9	4515	12	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_11	152.484764175917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCACAAACCCATCCAA	9	True	NA	NA	False	AATAAA	-20	NA	241508584	241492669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508442
transcript_59225.known	chr2	-	2210	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	252.580532939169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	4	False	NA	-5	True	AATAAA	-18	NA	241508688	241495016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
transcript_59229.known	chr2	-	2459	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	252.400891440581	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	-3	False	NA	-1	True	AATAAA	-40	NA	241508695	241494706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
transcript_5923.known	chr1	+	587	3	FSM	ENSG00000224167.3	ENST00000456651.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTAGTAATATGAGTGT	170	False	NA	24	True	AATAAA	-16	NA	112850027	112877871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112850428_112876939_112876985_112877729
transcript_59230.nic	chr2	-	2003	11	NIC	ENSG00000115694.15	novel	2210	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_10	278.620691981052	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	76	False	241508635	-10	True	AATAAA	-13	NA	241508616	241495021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508504
transcript_59231.known	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_10	282.060082251991	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
transcript_59238.nic	chr2	+	2032	2	ISM	ENSG00000176720.6	ENST00000318407.5	2626	5	11347	0	11347	0	3prime_fragment	FALSE	canonical	3	166	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	7698	False	NA	22	True	AATAAA	-28	NA	241570091	241574131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr2_+_241570289_241572296
transcript_59239.known	chr2	-	2076	6	FSM	ENSG00000176946.13	ENST00000407315.6	2076	6	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	35.3134535269492	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-43	True	NA	-2	True	AATAAA	-38	NA	241637158	241584404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
transcript_59240.known	chr2	-	785	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	256.902218752583	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	2173	False	NA	-2	True	AATAAA	-38	NA	241617501	241584404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
transcript_59243.nic	chr2	+	1666	14	NIC	ENSG00000168397.17	novel	1566	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_3	199.550056006184	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-16	True	NA	NA	NA	241637621	241672592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_59246.known	chr2	+	2797	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_7	74.2836156602218	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	1	True	NA	74	True	AAAACA	-3	NA	241637692	241673857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_59247.known	chr2	+	3294	13	FSM	ENSG00000168397.17	ENST00000405546.7	3294	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	185.347927333074	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTGTCTATTTTTT	NA	False	NA	71	True	NA	NA	NA	241637212	241673854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671426_241672190
transcript_59248.known	chr2	+	1685	13	FSM	ENSG00000168397.17	ENST00000402096.5	1685	13	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_12	188.924349204178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGACATGAATTTCT	NA	False	NA	20	True	ATTAAA	-19	NA	241637611	241672628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671442_241672190
transcript_5925.nic	chr1	-	836	3	FSM	ENSG00000215866.9	ENST00000691250.1	700	3	-136	0	-136	0	multi-exon	FALSE	canonical	3	2036	junction_1	759	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-19	True	AATAAA	-23	NA	112825877	112820169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112820539_112823652_112823755_112825512
transcript_59260.known	chr2	+	807	7	FSM	ENSG00000168397.17	ENST00000425239.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	88.6367430709309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTTATGAAGGCCCT	15	False	NA	NA	False	NA	NA	NA	241637706	241659448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107
transcript_59262.known	chr2	+	762	5	FSM	ENSG00000168397.17	ENST00000475195.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	89.5610825079733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTTTTGAGCACTGT	1	True	NA	3	True	AGTAAA	-27	NA	241637692	241655002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545
transcript_59265.known	chr2	+	1566	13	FSM	ENSG00000168397.17	ENST00000344376.9	1566	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	207.690658726439	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-16	True	NA	NA	NA	241651006	241672592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_5927.nnic	chr1	-	863	3	NNC	ENSG00000215866.9	novel	700	3	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	985.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-19	True	AATAAA	-23	NA	112825812	112820169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_112820539_112823652_112823847_112825512
transcript_59272.known	chr2	-	1051	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	183.80016322082	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	-11	True	NA	-10	True	AGTAAA	-15	NA	241686815	241675746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
transcript_59275.known	chr2	-	926	5	FSM	ENSG00000168393.13	ENST00000432348.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	465.059404807601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGCCCACTGGAGACGC	94	False	NA	NA	False	NA	NA	NA	241686742	241676122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241676238_241678451_241678650_241681918_241682334_241685768_241685878_241686653
transcript_59278.known	chr2	-	1089	4	FSM	ENSG00000168393.13	ENST00000400770.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	327.031429002712	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	NA	False	NA	-10	True	AGTAAA	-15	NA	241686944	241675746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241676238_241678451_241678650_241685768_241685878_241686653
transcript_59281.known	chr2	-	890	2	FSM	ENSG00000168393.13	ENST00000464603.1	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCTCCCACCTCAGCA	23	True	NA	NA	False	NA	NA	NA	241686781	241685115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241685878_241686653
transcript_59282.known	chr2	+	946	8	FSM	ENSG00000168395.16	ENST00000406941.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.9177118520254	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTGCCTGTGCT	0	True	NA	11	True	AATAAA	-21	NA	241702045	241724036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241723790
transcript_59283.known	chr2	+	920	6	FSM	ENSG00000168395.16	ENST00000489509.1	920	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.2087572469991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGCTCTGGATCTAGC	19	False	NA	NA	False	NA	NA	NA	241702064	241719919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241719482
transcript_59284.known	chr2	+	822	5	FSM	ENSG00000168395.16	ENST00000492488.5	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.8617522019678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAGGAGGATGGTGAG	-11	True	NA	NA	False	NA	NA	NA	241702034	241712380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977
transcript_59286.known	chr2	+	543	4	FSM	ENSG00000168395.16	ENST00000493261.5	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	19.8158185969358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGCTTACGCCTG	0	True	NA	NA	False	NA	NA	NA	241702045	241711623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376
transcript_59287.known	chr2	-	2097	5	FSM	ENSG00000188389.11	ENST00000334409.10	2097	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTCTGTCCTGTCTGGT	1	True	NA	NA	False	ATTAAA	-17	NA	241858894	241849883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241851298_241851948_241851984_241852197_241852354_241852620_241852981_241858762
transcript_59289.known	chr2	-	507	3	FSM	ENSG00000216921.9	ENST00000401641.2	507	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTCTAGCGCATCTCT	NA	False	NA	NA	False	NA	NA	NA	241902551	241894036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_-_241894340_241897185_241897335_241902496
transcript_59290.known	chr2	+	1235	8	FSM	ENSG00000220804.10	ENST00000456398.5	1235	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.75821495572278	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTTTTTTTTTAA	2478	False	NA	NA	False	NA	NA	NA	242088632	242140638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182_242116233_242118964_242119058_242122286_242122456_242138783_242138889_242140233
transcript_59291.known	chr20	-	1576	11	FSM	ENSG00000196476.12	ENST00000360321.7	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	56.7645135626123	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-7	True	NA	-14	True	AATAAA	-18	NA	290750	270862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290590
transcript_59293.nic	chr20	-	1595	10	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	264	0	-57	0	3prime_fragment	FALSE	canonical	3	97	junction_8	36.6090456338624	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	8161	False	NA	-14	True	AATAAA	-18	NA	290486	270862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_59296.known	chr20	-	1420	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	45.912961132996	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-22	True	NA	-14	True	AATAAA	-18	NA	290429	270862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_59299.nic	chr20	-	2301	9	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-57	0	intron_retention	FALSE	canonical	3	97	junction_7	38.2604152486614	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	8161	False	NA	-14	True	AATAAA	-18	NA	290486	270862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_271268_275967_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_5930.known	chr1	-	1222	3	FSM	ENSG00000215866.9	ENST00000667852.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_1	1046.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-27	True	AATAAA	-15	NA	112826268	112820177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112820542_112823652_112823755_112825512
transcript_59301.nic	chr20	-	2465	8	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-57	0	intron_retention	FALSE	canonical	3	97	junction_6	40.8930910785573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	8161	False	NA	-14	True	AATAAA	-18	NA	290486	270862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_271268_275967_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_59306.nic	chr20	-	1723	2	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	264	17319	-57	-17319	internal_fragment	FALSE	canonical	3	125	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAG	8161	False	NA	NA	False	NA	NA	NA	290486	288181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_289677_290258
transcript_59307.nic	chr20	-	474	2	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	264	18568	-57	-18568	internal_fragment	FALSE	canonical	3	125	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGATATAGAAGTTTAT	8161	False	NA	-6	True	AATAAA	-18	NA	290486	289430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_289677_290258
transcript_59308.known	chr20	-	1608	11	FSM	ENSG00000196476.12	ENST00000400269.4	1608	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	60.3867535143263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-35	True	NA	-14	True	AATAAA	-18	NA	290778	270862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290586
transcript_59309.known	chr20	+	504	5	FSM	ENSG00000125841.13	ENST00000608467.5	504	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	116.295689945931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAAAGTCTTGTTGA	12	True	NA	NA	False	AATGAA	-12	NA	347119	359405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_347143_349248_349364_349637_349833_355325_355350_359258
transcript_59310.known	chr20	+	2074	5	FSM	ENSG00000125841.13	ENST00000382285.7	2074	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	121.653195601266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACTTTGTTTCCTTTC	3	True	NA	24	True	AATAAA	-14	NA	347110	354862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_347143_347433_347513_349248_349364_349637_349833_353209
transcript_59314.known	chr20	+	2088	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	37.1872140511882	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTCTCCCTG	216	False	NA	30	True	AATAAA	-20	NA	347023	354868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_347143_349248_349364_349637_349833_353209
transcript_59318.known	chr20	+	846	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	70.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCATAACCCCCTCTC	75	False	NA	NA	False	NA	NA	NA	346882	353680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_347143_349248_349364_353209
transcript_59320.known	chr20	-	1411	3	FSM	ENSG00000225377.6	ENST00000414676.6	1411	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTTGTGTTTGT	-4	True	NA	-3	True	NA	NA	NA	325269	319686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_320782_322377_322566_325141
transcript_59323.known	chr20	+	1070	4	FSM	ENSG00000101255.12	ENST00000449710.5	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	47.5417944783558	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCGCGGGGCCTACG	212	False	NA	NA	False	NA	NA	NA	381245	396428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_381501_388010_388302_391286_391580_396197
transcript_59324.known	chr20	+	3701	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	23.8788263343791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCTTGGTAATGCC	-20	True	NA	16	True	ATTAAA	-28	NA	408298	432139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_59327.known	chr20	+	1200	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	8	True	NA	20	True	AATAAA	-19	NA	408077	410764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_409880_410026_410411
transcript_59328.known	chr20	+	790	2	FSM	ENSG00000125826.21	ENST00000400247.3	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	24	True	NA	20	True	AATAAA	-19	NA	408342	410764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_410411
transcript_59329.known	chr20	+	1024	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	-14	True	NA	20	True	AATAAA	-19	NA	408304	410764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_408780_409829_410026_410411
transcript_59333.known	chr20	-	2822	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	201.651318958914	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGAATATCTGTGTC	11	True	NA	-11	True	NA	NA	NA	543732	472507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_59335.known	chr20	-	4290	14	FSM	ENSG00000101266.19	ENST00000645910.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	273.883229987962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTTTAATTTTTTTTAA	-16	True	NA	-79	True	ACTAAA	-34	NA	543759	481149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_508450_508661_543671
transcript_59336.known	chr20	-	4295	14	FSM	ENSG00000101266.19	ENST00000645840.1	4295	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	275.2942911605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGTCTTTAATTTTT	-6	True	NA	-84	True	ACTAAA	-29	NA	543790	481154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_500030_500116_505117_505230_508450_508661_543671
transcript_59338.known	chr20	-	12984	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	262.161858851905	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	-6	True	NA	-1	True	NA	NA	NA	543790	472497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
transcript_5934.known	chr1	+	490	2	FSM	ENSG00000224167.3	ENST00000422022.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTGCTAGTAATATGA	218	False	NA	20	True	AATAAA	-12	NA	112850075	112877867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112850428_112877729
transcript_59342.known	chr20	-	12912	13	FSM	ENSG00000101266.19	ENST00000646561.1	12912	13	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_12	51.9917194261633	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	NA	False	NA	-1	True	NA	NA	NA	543835	472497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_59346.known	chr20	-	4047	12	FSM	ENSG00000101266.19	ENST00000349736.10	4047	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	215.724495250863	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTGCAGCCTGAG	-8	True	NA	-39	True	AATAAA	-17	NA	543792	481109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_543671
transcript_59347.known	chr20	-	2545	12	FSM	ENSG00000101266.19	ENST00000642689.1	2545	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	218.778993356045	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTATTTATCAAGGT	11	True	NA	17	True	AATAAA	-4	NA	543732	482710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499832_499935_505117_505230_508450_508661_543671
transcript_59352.known	chr20	-	1419	3	FSM	ENSG00000101266.19	ENST00000642160.1	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_2	59	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCGCCCAGGCTGGA	0	True	NA	NA	False	NA	NA	NA	543816	504165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_505230_508450_508661_543671
transcript_59354.known	chr20	-	2586	13	FSM	ENSG00000101266.19	ENST00000645234.1	2586	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213.779806238933	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGGTTTTATTTATCA	-1	True	NA	13	True	NA	NA	NA	543712	482714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484091_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_59355.known	chr20	-	2812	14	FSM	ENSG00000101266.19	ENST00000646814.1	2812	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	279.095835166168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAAACGTTTGGTTTTA	-1	True	NA	6	True	NA	NA	NA	543712	482721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_526695_526943_543671
transcript_59356.known	chr20	-	1490	13	FSM	ENSG00000101266.19	ENST00000400227.8	1490	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213.779806238933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAAAATGCTGCAGCA	120	False	NA	NA	False	NA	NA	NA	543696	478464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_478761_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_59357.known	chr20	-	2018	4	FSM	ENSG00000101266.19	ENST00000609606.6	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_3	60.0351748745868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	543790	498357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_499935_505117_505230_508450_508661_543671
transcript_59358.known	chr20	-	2654	6	FSM	ENSG00000101276.18	ENST00000217254.11	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	5.00399840127872	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	776015	760079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_761239_761700_761825_763497_764004_765207_765826_768296_768483_775954
transcript_59359.known	chr20	+	8154	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_3	36.3581719379106	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	-30	True	NA	NA	False	ATTAAA	-23	NA	1118601	1172246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
transcript_59360.known	chr20	+	2042	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	221.234415646993	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	-34	True	NA	22	True	AATAAA	-24	NA	1118597	1167328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
transcript_59367.known	chr20	+	632	3	FSM	ENSG00000125818.18	ENST00000478004.1	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGAGTGCCTAGC	-22	True	NA	NA	False	NA	NA	NA	1118609	1135306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_1118903_1125497_1125651_1135120
transcript_59369.known	chr20	-	1591	6	FSM	ENSG00000088832.18	ENST00000678136.1	1591	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1517.68705601649	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCTGTGTCATGGT	1	True	NA	-15	True	AATAAA	-20	NA	1393054	1368982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1377429_1377512_1392833_1392882_1392961
transcript_59370.known	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	4.60298815988049	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	18	False	NA	NA	False	AATAAA	-20	NA	1313639	1309974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
transcript_59372.known	chr20	-	1514	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_4	275.022726333661	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	1	True	NA	-10	True	AATAAA	-25	NA	1393054	1368977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_59373.known	chr20	-	1452	4	FSM	ENSG00000088832.18	ENST00000618612.5	1452	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	1279.05772608849	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	1	True	NA	-10	True	AATAAA	-25	NA	1393105	1368977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1392833_1392882_1392961
transcript_59374.known	chr20	-	3564	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_3	317.058354250444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTATGCCGGCTTTTCT	-17	True	NA	-32	True	AATAAA	-3	NA	1393123	1368999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
transcript_59376.known	chr20	+	413	3	FSM	ENSG00000234684.8	ENST00000665859.2	438	3	21	4	0	-4	multi-exon	FALSE	canonical	3	9	junction_1	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTATCTGAATTGATC	8	True	NA	-1	True	AATAAA	-14	NA	1325420	1359859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_1325530_1350338_1350482_1359698
transcript_59377.known	chr20	-	1579	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	3121	junction_1	127.917508140555	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGTGGTTAT	-5	True	NA	-9	True	AATAAA	-26	NA	1393038	1368976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
transcript_5938.known	chr1	-	3849	6	FSM	ENSG00000155380.13	ENST00000458229.6	3849	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	729.767798686678	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATAAATAACTTTTTCC	-3	True	NA	-23	True	AATAAA	-9	NA	112956198	112911855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275_112955379_112956034
transcript_59382.known	chr20	-	2800	10	FSM	ENSG00000088833.18	ENST00000476071.5	2800	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	419.087220952193	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-8	True	NA	0	True	ATTAAA	-22	NA	1466918	1442161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1455713_1455720_1458199_1458275_1464328_1464427_1466719
transcript_5939.known	chr1	-	3753	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_2	121.073066782006	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	-1	True	NA	-14	True	AATAAA	-18	NA	112956196	112911846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
transcript_59391.known	chr20	-	2721	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_6	98.8316118456033	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-10	True	NA	-4	True	ATTAAA	-18	NA	1466849	1442165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_59392.known	chr20	-	1446	9	FSM	ENSG00000088833.18	ENST00000381653.9	1446	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	350.244535110828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCCCTCCTGTGT	15	True	NA	NA	False	NA	NA	NA	1466824	1443734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1446150_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_59393.known	chr20	-	2588	8	FSM	ENSG00000088833.18	ENST00000555944.5	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	438.526428589462	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	5	True	NA	0	True	ATTAAA	-22	NA	1466905	1442161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455038_1458199_1458275_1466719
transcript_59398.known	chr20	-	807	4	FSM	ENSG00000101327.9	ENST00000651882.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTCTGAGCAAGAGCC	398	False	NA	NA	False	NA	NA	NA	1994285	1980731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1980959_1982955_1983101_1992583_1992644_1993910
transcript_59399.known	chr20	-	2556	4	FSM	ENSG00000101327.9	ENST00000217305.3	2556	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGGTGGGTGTGTGTG	-2	True	NA	-2	True	AATAAA	-18	NA	1994058	1978758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_1980959_1982955_1983104_1992583_1992644_1993910
transcript_5940.known	chr1	-	4374	5	FSM	ENSG00000155380.13	ENST00000538576.5	4374	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	646.91860964112	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAACTTTTTCCTCAT	276	False	NA	-19	True	AATAAA	-13	NA	112956063	112911851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275
transcript_59401.known	chr20	+	536	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	NA	False	NA	5	True	ATTAAA	-14	NA	2207226	2213151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2207520_2212908
transcript_59410.known	chr20	-	985	8	FSM	ENSG00000125835.20	ENST00000474384.2	985	8	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	2220.23251218499	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTTAAGAGAACATTATA	88	False	NA	NA	False	NA	NA	NA	2470732	2461659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467191_2467316_2467606_2467759_2470687
transcript_59419.known	chr20	-	1008	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	1756	junction_1	1201.42869812015	2245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGATCTTTATTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	2470853	2461633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_59424.known	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3152	junction_1	710.912422329377	4663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-10	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_59433.known	chr20	-	3415	6	FSM	ENSG00000088876.13	ENST00000278772.9	3415	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	4.95580467734555	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAACTTGTTTTATTTT	1	True	NA	NA	False	AATAAA	-31	NA	2508915	2481816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2484657_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_59448.known	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	184.132587874486	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	-1	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_59491.known	chr20	+	1094	6	FSM	ENSG00000101361.17	ENST00000466447.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	357.072205583128	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	10	False	NA	14	True	AATAAA	-16	NA	2656110	2658393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
transcript_59492.known	chr20	+	859	3	FSM	ENSG00000101361.17	ENST00000462630.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_1	24	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	15	False	NA	14	True	AATAAA	-16	NA	2656639	2658393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2656896_2657080_2657219_2657928
transcript_59495.nic	chr20	-	1430	13	NIC	ENSG00000101365.21	novel	1279	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	208.596284056601	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-14	True	NA	-6	True	AATAAA	-14	NA	2664219	2658394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_2658523_2658637_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_595.nic	chr1	-	1033	8	NIC	ENSG00000162441.12	novel	652	5	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	48.3051524695041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	6	True	NA	-3	True	AATAAA	-23	NA	9943354	9922112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_59500.known	chr20	-	1279	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	222.971597593356	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	16	True	NA	-6	True	AATAAA	-14	NA	2664189	2658394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_59504.known	chr20	-	1230	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	185.810487298437	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-14	True	NA	-6	True	AATAAA	-14	NA	2664219	2658394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_59508.known	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	73.2316600457606	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-11	True	NA	-6	True	AATAAA	-14	NA	2664216	2658394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_5951.known	chr1	+	742	3	FSM	ENSG00000226419.8	ENST00000416193.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	-10	True	NA	0	True	AATAAA	-15	NA	112956414	112964072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112956957_112960476_112960576_112963971
transcript_5952.known	chr1	+	1897	3	FSM	ENSG00000226419.8	ENST00000420168.2	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAGGTAGAGCTGGCCG	23	False	NA	NA	False	AAAACA	-3	NA	112956519	112969395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_112956957_112960476_112960576_112968034
transcript_59547.known	chr20	-	823	5	FSM	ENSG00000101365.21	ENST00000491065.1	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_4	56.2466665678954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGGGGCGGGGCAAGG	-4	True	NA	NA	False	NA	NA	NA	2664209	2660504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_59549.known	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_19	16.0749661543035	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_5955.known	chr1	-	452	2	FSM	ENSG00000155380.13	ENST00000478835.1	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	1494	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGTCTGTATTAGGT	158	False	NA	NA	False	NA	NA	NA	112956181	112929047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_112929353_112956034
transcript_59558.known	chr20	+	2318	20	FSM	ENSG00000215305.10	ENST00000380469.7	2318	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	38.5056027149714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	-4	True	NA	22	True	AATAAA	-15	NA	2840702	2866732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_59562.known	chr20	-	1706	8	FSM	ENSG00000132635.17	ENST00000356872.7	1706	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	22.2508885399286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	NA	False	NA	0	True	AATAAA	-25	NA	2841190	2835313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2838930_2839191_2839272_2839788_2839934_2840865
transcript_59563.known	chr20	-	1979	8	FSM	ENSG00000132635.17	ENST00000360652.7	1979	8	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	11.4873488531284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	6	True	NA	0	True	AATAAA	-25	NA	2840655	2835313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
transcript_59565.nic	chr20	-	2198	2	ISM	ENSG00000132635.17	ENST00000487501.2	712	4	1096	0	526	0	3prime_fragment	FALSE	canonical	3	67	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	3298	False	NA	0	True	AATAAA	-25	NA	2837840	2835313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_2835710_2836038
transcript_59568.known	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_3	86.7653284568336	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	-8	True	NA	31	True	AATAAA	-17	NA	3046051	3048250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
transcript_59569.nic	chr20	+	831	3	ISM	ENSG00000125901.6	ENST00000380325.4	1016	4	277	0	277	0	3prime_fragment	FALSE	canonical	3	1310	junction_2	23.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	-27	True	NA	31	True	AATAAA	-17	NA	3046328	3048250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_3046520_3046613_3046738_3047734
transcript_5957.known	chr1	+	11566	18	FSM	ENSG00000198799.12	ENST00000361127.6	11566	18	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	21.0686799148974	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTCTTCTTTTGCC	-20	True	NA	5	True	AATAAA	-17	NA	113073197	113132260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113073646_113091317_113091384_113093205_113093281_113093429_113093565_113094338_113094483_113094611_113094756_113095873_113096018_113096221_113096366_113098704_113098786_113100210_113100283_113100419_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
transcript_59570.known	chr20	-	4300	5	FSM	ENSG00000185019.17	ENST00000217173.7	4300	5	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	27.6676706645138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	5	True	NA	-4	True	AATAAA	-17	NA	3159865	3107572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3110315_3115304_3115467_3121383_3122585_3123311_3123407_3159765
transcript_59571.known	chr20	-	4469	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.1058061754523	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	8107	False	NA	-4	True	AATAAA	-17	NA	3160196	3107572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
transcript_59572.nnic	chr20	-	2904	3	FSM	ENSG00000215251.5	ENST00000692371.1	2822	3	-78	-4	-8	0	multi-exon	FALSE	canonical	2	10	junction_2	3.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTTGGATTTTTCTT	-3	True	NA	0	True	AATAAA	-29	NA	3159873	3146518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3149261_3156072_3156127_3159765
transcript_59573.known	chr20	-	2842	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTTGGATTTTTCTT	5	True	NA	0	True	AATAAA	-29	NA	3159865	3146518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3149261_3159765
transcript_59575.known	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	2	307	junction_6	51.2219435398541	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-17	True	NA	0	True	AAGAAA	-20	NA	3204682	3190349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_59580.known	chr20	+	729	8	FSM	ENSG00000125877.13	ENST00000455664.6	729	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	276.856332005299	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCTCTGAGAAACTC	12	True	NA	NA	False	NA	NA	NA	3209512	3223618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209567_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_59582.known	chr20	+	1028	7	FSM	ENSG00000125877.13	ENST00000483354.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	393.093182337216	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	192	False	NA	31	True	AATAAA	-31	NA	3208867	3223870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209034_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_59586.known	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	308.191239330387	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	24	True	NA	31	True	AATAAA	-31	NA	3209524	3223870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_59588.known	chr20	+	1037	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	91.8079183815373	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	-3	True	NA	21	True	AATAAA	-21	NA	3209497	3223860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_59589.known	chr20	+	967	7	FSM	ENSG00000125877.13	ENST00000460550.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	306.52768589839	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	12	True	NA	31	True	AATAAA	-31	NA	3209512	3223870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3209618_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_59590.known	chr20	-	3046	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_19	18.8637041744207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	14	True	NA	-11	True	AATAAA	-17	NA	3239190	3227421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_59593.known	chr20	-	3229	20	FSM	ENSG00000088836.14	ENST00000380059.7	3229	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_19	25.4446332824996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	1392	False	NA	-6	True	AATAAA	-22	NA	3238166	3227416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3237892
transcript_59595.known	chr20	-	1302	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	469.044731342332	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	10	True	NA	-4	True	AATAAA	-19	NA	3767728	3753507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
transcript_59596.known	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	42.3065006825192	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-15	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
transcript_596.nic	chr1	-	979	8	NIC	ENSG00000162441.12	novel	652	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	56.8592964416263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	-40	True	NA	-3	True	AATAAA	-23	NA	9943400	9922112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_59610.known	chr20	+	1960	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	21.0664556951461	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTTTCCTTGTTA	-53	True	NA	24	True	NA	NA	NA	3795738	3805237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_59615.known	chr20	+	1791	3	FSM	ENSG00000125843.11	ENST00000379567.6	1791	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCTGTGAGTTTGA	-3	True	NA	30	True	ATTAAA	-22	NA	3820535	3825302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3820703_3822101_3822294_3823870
transcript_59617.known	chr20	+	5372	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACAGGTTTTTGTG	8	True	NA	NA	False	AATACA	-14	NA	3820546	3828838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3820759_3822101_3822294_3823870
transcript_59619.known	chr20	+	584	3	FSM	ENSG00000125843.11	ENST00000455742.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCTGCACGAGGCCC	8	True	NA	NA	False	NA	NA	NA	3820546	3823954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3820855_3822101_3822294_3823870
transcript_59621.nnic	chr20	+	1505	3	NNC	ENSG00000125843.11	novel	1960	3	NA	NA	274	-355	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACAGTCATCGAAACAC	282	False	NA	NA	False	NA	NA	NA	3820820	3824947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_3821057_3822101_3822294_3823870
transcript_59624.nnic	chr20	+	1807	7	NNC	ENSG00000088888.18	novel	11731	7	NA	NA	3	-5469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	30.6902083552538	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	3846836	3870649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864522_3869867
transcript_59625.known	chr20	+	11731	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	9.92331709773613	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	-16	True	NA	11	True	AATAAA	-23	NA	3846833	3876118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_59628.known	chr20	+	11596	6	FSM	ENSG00000088888.18	ENST00000416600.6	11596	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	28.6956442687736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAATGGTCTACAATGG	NA	False	NA	16	True	AATAAA	-28	NA	3846798	3876123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3846904_3854557_3854742_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_5963.nnic	chr1	-	1865	12	NNC	ENSG00000116793.16	novel	2747	15	NA	NA	1050	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_11	78.0784729223382	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	1403	False	NA	-8	True	AATAAA	-16	NA	113758105	113705764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113757991
transcript_59636.known	chr20	+	4815	7	FSM	ENSG00000125779.24	ENST00000497424.5	4815	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	121.079404616236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCGCTATTTCAGGTCA	56	False	NA	NA	False	NA	NA	NA	3888838	3926958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3888905_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59640.nic	chr20	+	1507	7	NIC	ENSG00000125779.24	novel	1763	7	NA	NA	-26	85	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	144.085237118712	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGTGCATTACTCTGG	388	False	NA	-63	True	NA	NA	NA	3889789	3923716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_3889933_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59642.known	chr20	+	1763	7	FSM	ENSG00000125779.24	ENST00000621507.1	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	119.609666090255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	0	True	NA	-31	True	NA	NA	NA	3889815	3923855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_3889933_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_59645.known	chr20	-	1128	7	FSM	ENSG00000101236.17	ENST00000545616.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	36.3199516641871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATGCCTTTGATAAG	13	True	NA	3	True	NA	NA	NA	4015545	3933566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_3974331_3974401_4015436
transcript_59647.known	chr20	-	7328	6	FSM	ENSG00000101236.17	ENST00000358395.11	7328	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	18.1372544780074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTGTGCATATGCCTT	0	True	NA	-2	True	AATAAA	-17	NA	4015558	3927310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015436
transcript_59650.known	chr20	+	2074	8	FSM	ENSG00000088826.18	ENST00000339123.10	2074	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	34.8208241705788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	NA	False	NA	44	True	AATAAA	-45	NA	4148778	4187747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4187269
transcript_59651.known	chr20	+	2164	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	16.8226038412607	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	1	True	NA	24	True	AATAAA	-25	NA	4148827	4187727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
transcript_59653.known	chr20	+	2322	8	FSM	ENSG00000088826.18	ENST00000621355.4	2322	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	50.1874038998241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGTGTATGTGTGTG	NA	False	NA	43	True	AATAAA	-44	NA	4148778	4187746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4186742_4186833_4187269
transcript_59654.known	chr20	+	2429	2	FSM	ENSG00000171867.18	ENST00000424424.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	2	True	NA	11	True	ATTAAA	-22	NA	4686458	4701590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4686513_4699215
transcript_59655.known	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	-1	True	NA	9	True	ATTAAA	-20	NA	4686455	4701588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4686513_4699210
transcript_59656.known	chr20	+	2574	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	86	False	NA	11	True	ATTAAA	-22	NA	4686542	4701590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4686737_4699210
transcript_59657.known	chr20	+	3981	2	FSM	ENSG00000171864.5	ENST00000305817.3	3981	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGTCTGGTACTTCT	-2	True	NA	5	True	AATAAA	-18	NA	4721908	4728460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_4721970_4724540
transcript_5966.known	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	24.2794151494635	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-4	True	NA	NA	False	ATTAAA	-20	NA	113905070	113894747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
transcript_59662.known	chr20	-	1541	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	625.230757400818	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	13	True	NA	-22	True	AATAAA	-19	NA	5113076	5099849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
transcript_59668.nnic	chr20	-	1388	4	NNC	ENSG00000089063.15	novel	1541	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	528.189570345934	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	-1	True	NA	-22	True	AATAAA	-19	NA	5113117	5099849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_5100932_5106187_5106223_5109331_5109446_5112960
transcript_59669.known	chr20	-	1660	4	FSM	ENSG00000089063.15	ENST00000379283.6	1660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	597.590904288953	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	6933	False	5113056	-12	True	AATAAA	-29	NA	5113050	5099839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112719
transcript_5967.nnic	chr1	-	2457	11	NNC	ENSG00000134262.13	novel	2742	11	NA	NA	-533	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	26.657081610709	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGTCTAGAGTAAGA	NA	False	NA	-22	True	AATAAA	-17	NA	113905734	113895055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113905582
transcript_59670.known	chr20	-	1642	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	514.20445566158	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113042	5099839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
transcript_59671.known	chr20	-	1636	4	FSM	ENSG00000089063.15	ENST00000379279.6	1636	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	563.669130686513	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	6934	False	5113056	-12	True	AATAAA	-29	NA	5113049	5099839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112742
transcript_59672.known	chr20	-	1472	4	FSM	ENSG00000089063.15	ENST00000202834.11	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_3	102.303470126873	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	6880	False	5113116	-12	True	AATAAA	-29	NA	5113103	5099839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112960
transcript_59677.known	chr20	-	1735	5	FSM	ENSG00000089063.15	ENST00000379286.6	1735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	629.261074594639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113042	5099839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112742
transcript_59679.known	chr20	-	1359	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	379.653679906657	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	998	False	NA	-4	True	AATAAA	-23	NA	5126626	5114952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
transcript_5968.known	chr1	-	3173	10	FSM	ENSG00000134262.13	ENST00000369569.6	3173	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	18.5771663907904	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCGAATCCAGAATGGGAA	50	True	NA	NA	False	AATAAA	-19	NA	113904799	113894193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604
transcript_59681.known	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_5	102.96989851408	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-3	True	NA	-4	True	AATAAA	-23	NA	5119958	5114952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
transcript_59688.known	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_10	18.6703865341169	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	-17	True	NA	5	True	AATAAA	-17	NA	5127007	5197887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
transcript_5969.nic	chr1	-	2207	10	NIC	ENSG00000134262.13	novel	2742	11	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_8	31.293512915895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGTCTAGAGTAAGA	-2	True	NA	-22	True	AATAAA	-17	NA	113905068	113895055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113904604_113904794_113904941
transcript_59697.known	chr20	-	5434	20	FSM	ENSG00000125772.14	ENST00000379019.7	5434	20	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_15	11.1365237244312	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGTTTCCTAACTCAGA	-1	True	NA	-12	True	AATAAA	-16	NA	5611006	5544438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
transcript_59700.known	chr20	+	585	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	16	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	-3	True	NA	6	True	AATAAA	-18	NA	5750392	5773447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5750480_5772861_5773044_5773131
transcript_59701.known	chr20	+	1633	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	13.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCCCTACTTTCTCT	5	True	NA	NA	False	AATAAA	-15	NA	5750400	5864395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5750480_5772861_5773044_5863023
transcript_59703.known	chr20	+	2462	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4.58257569495584	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGCTTCATTGTTC	0	True	NA	2	True	AATAAA	-13	NA	5911509	5925353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
transcript_59705.known	chr20	-	3025	11	FSM	ENSG00000089195.15	ENST00000473131.5	3025	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	94.9987368337074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGGCACAGTGGCTCAT	-1	True	NA	NA	False	AATAAA	-7	NA	5950515	5937234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943826_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_59706.known	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	29.0199931082004	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-19	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_59708.nnic	chr20	-	2251	10	NIC	ENSG00000089195.15	novel	2929	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	101.750360208056	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-49	True	NA	-4	True	ATTAAA	-21	NA	5950563	5937832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_5938727_5941052_5941140_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_59709.known	chr20	-	2239	10	FSM	ENSG00000089195.15	ENST00000453074.6	2239	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	98.7522151650281	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-44	True	NA	-4	True	ATTAAA	-21	NA	5950558	5937832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5946405_5946534_5950277
transcript_59710.nic	chr20	-	604	4	ISM	ENSG00000089195.15	ENST00000466974.5	2976	9	-86	6341	-5	-1499	5prime_fragment	FALSE	canonical	3	290	junction_1	36.790699307781	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAAAAGTAAGTAG	-49	True	NA	NA	False	ATTAAA	-3	NA	5950563	5944173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_5944254_5944804_5944915_5946405_5946534_5950277
transcript_59711.known	chr20	+	7486	19	FSM	ENSG00000125885.13	ENST00000610722.4	7486	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	10.9645894689324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAAAACAAAAACTGAGC	-12	True	NA	NA	False	ATTAAA	-15	NA	5950651	5998977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5951024_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
transcript_59713.known	chr20	+	3769	19	FSM	ENSG00000125885.13	ENST00000378896.7	3769	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	10.7731949019342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTAATAATAGGTCTC	-12	True	NA	NA	False	CATAAA	-45	NA	5950651	5995206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_5951078_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
transcript_59715.known	chr20	+	3925	7	FSM	ENSG00000088766.12	ENST00000378863.9	3925	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	80.0112839264285	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATGGCTCTAAT	2	True	NA	NA	False	AATAAA	-22	NA	6006122	6040053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_59716.known	chr20	+	524	1	FSM	ENSG00000275632.1	ENST00000619201.1	524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTACTGGTTTAATTT	NA	False	NA	14	True	AATAAA	-14	NA	6000417	6000941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_6000400_6000900
transcript_59719.known	chr20	-	4637	15	FSM	ENSG00000101311.16	ENST00000217289.9	4637	15	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_14	5.43420760046007	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGGTCCTGTTGTGTCCT	24	True	NA	-7	True	AGTAAA	-19	NA	6123030	6074844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119573_6122773
transcript_59720.known	chr20	-	874	8	FSM	ENSG00000228888.1	ENST00000449581.1	874	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.79941684889506	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGATGTTGCTGTTGT	4076	False	NA	NA	False	NA	NA	NA	7254202	7146466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_7146648_7147177_7147374_7148000_7148200_7183342_7183394_7188484_7188568_7241828_7241877_7249808_7249850_7254127
transcript_59726.known	chr20	+	5303	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	13.3869293171814	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	-26	True	NA	14	True	AATACA	-20	NA	10035048	10058303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_59729.nic	chr20	+	1544	4	ISM	ENSG00000132623.16	ENST00000378380.4	5303	10	-9	13250	-9	1837	5prime_fragment	FALSE	canonical	3	66	junction_3	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAATTTCATCTGAAAT	-35	True	NA	NA	False	AATAAA	-18	NA	10035039	10045053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393
transcript_59730.nic	chr20	+	1009	2	ISM	ENSG00000132623.16	ENST00000488991.1	2805	11	-77	16855	-9	-4244	5prime_fragment	FALSE	canonical	3	72	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	-35	True	NA	NA	False	TATAAA	-25	NA	10035039	10038972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_10035334_10038257
transcript_59732.known	chr20	-	6181	7	FSM	ENSG00000125863.20	ENST00000651692.1	6181	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	350.231669359329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCATCACATACATTA	-18	True	NA	NA	False	AATAAA	-9	NA	10434214	10401620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10428729_10428817_10434107
transcript_59736.known	chr20	-	6714	6	FSM	ENSG00000125863.20	ENST00000347364.7	6714	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	479.853727712935	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTAGTATTGTGG	-26	True	NA	NA	False	AATAAA	-23	NA	10434222	10401008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10434107
transcript_59737.nnic	chr20	-	1142	5	NIC	ENSG00000125863.20	novel	6714	6	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_3	496.567404790125	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTGTATTTGTTTTC	-31	True	NA	0	True	AATAAA	-26	NA	10434227	10405183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_10405688_10407615_10407727_10408627_10408804_10420527_10420759_10434107
transcript_59740.nic	chr20	-	1062	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-328	8585	-304	-8336	5prime_fragment	FALSE	canonical	3	1118	junction_1	97.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTCTCGTTTGGAA	NA	False	NA	2	True	AATAAA	-28	NA	10434526	10413519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_59741.nic	chr20	-	622	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-76	8773	-52	-8524	5prime_fragment	FALSE	canonical	3	1118	junction_1	97.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCATTAAATCATTCTA	NA	False	NA	-57	True	AATAAA	-17	NA	10434274	10413707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_59745.known	chr20	+	6056	8	FSM	ENSG00000149346.15	ENST00000334534.10	6056	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	6.1145527311522	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	-19	True	NA	5	True	AGTAAA	-15	NA	10435304	10628030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
transcript_59751.nic	chr20	+	2321	3	ISM	ENSG00000149346.15	ENST00000334534.10	6056	8	10	69674	10	-69674	5prime_fragment	FALSE	canonical	2	10	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAATTCGCTGATGT	-9	True	NA	NA	False	NA	NA	NA	10435314	10558356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_10435454_10458175_10458232_10556230
transcript_59752.known	chr20	+	4826	6	FSM	ENSG00000132640.15	ENST00000399006.6	4826	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	138.452013347586	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	-15	True	NA	33	True	AATAAA	-28	NA	11890816	11926609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_11890955_11917777_11918012_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_59755.known	chr20	+	4686	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	25.9855729203726	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	NA	False	NA	33	True	AATAAA	-28	NA	11890722	11926609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_59762.known	chr20	-	2342	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	10.9414796225813	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-9	True	NA	-4	True	AATAAA	-18	NA	13638932	13389393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_5977.known	chr1	-	2418	7	FSM	ENSG00000081019.14	ENST00000615321.1	2418	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	11.2842072532072	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAAGCATATCTTTT	-12	True	NA	NA	False	TATAAA	-18	NA	113812289	113765847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_5978.known	chr1	-	2144	7	FSM	ENSG00000134262.13	ENST00000369567.5	2144	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	31.6355109893227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	21	True	NA	NA	False	ATTAAA	-20	NA	113904828	113894747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113904604
transcript_59782.known	chr20	-	3188	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_9	25.3115498579802	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGTATAGCACTGAT	-13	True	NA	-14	True	AATAAA	-18	NA	13784919	13714324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59784.nic	chr20	-	2340	13	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-47	3095	-47	-3095	5prime_fragment	FALSE	canonical	3	280	junction_8	26.0398999400706	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGCAGCTCATGA	NA	False	NA	NA	False	NA	NA	NA	13784966	13717419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59788.nic	chr20	-	2086	10	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-87	19430	-87	-19430	5prime_fragment	FALSE	canonical	3	280	junction_5	23.5550314407101	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAAAGACTGA	NA	False	NA	NA	False	GATAAA	-33	NA	13785006	13733754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59790.nic	chr20	-	1944	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-85	45419	-85	-45419	5prime_fragment	FALSE	canonical	3	280	junction_4	22.8770490885516	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGGCAAAGAAAA	NA	False	NA	83	True	AATACA	-30	NA	13785004	13759743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59792.nic	chr20	-	1832	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-47	45493	-47	-45493	5prime_fragment	FALSE	canonical	3	280	junction_4	22.8770490885516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAGTCAGAAGGAT	NA	False	NA	9	True	NA	NA	NA	13784966	13759817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_59796.nic	chr20	-	668	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-91	68322	-91	-68322	5prime_fragment	FALSE	canonical	3	303	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAGAGAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	13785010	13782646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13783184_13784879
transcript_59797.nic	chr20	-	472	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-80	68507	-80	-68507	5prime_fragment	FALSE	canonical	3	303	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCGATTCAAAAAATCT	NA	False	NA	NA	False	AATAAA	-26	NA	13784999	13782831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_13783184_13784879
transcript_598.known	chr1	-	4989	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	22.9213384230075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCACGTTTTTCTT	-31	True	NA	0	True	AATAAA	-35	NA	9943391	9926292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_5980.known	chr1	+	3755	4	FSM	ENSG00000118655.7	ENST00000650450.2	3755	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	15.5777619273972	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTTTTATTTCC	-16	True	NA	21	True	AATGAA	-15	NA	113905325	113914086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113905776_113906995_113907162_113908008_113908192_113911130
transcript_59802.nic	chr20	+	1200	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	51.8711053501652	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-16	True	NA	10	True	AATAAA	-18	NA	13785042	13817228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_59803.known	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	44.9109311363858	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	NA	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_59806.nic	chr20	+	1108	11	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	39.8473336623669	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-22	True	NA	10	True	AATAAA	-18	NA	13785036	13817228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_59807.known	chr20	+	5449	11	FSM	ENSG00000101247.18	ENST00000378106.10	5449	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	24.9697817371318	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGTGTTTTAGAGTAA	-31	True	NA	NA	False	GATAAA	-15	NA	13785027	13821580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_59811.known	chr20	+	991	10	FSM	ENSG00000101247.18	ENST00000463598.1	991	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	56.4153468306691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-9	True	NA	10	True	AATAAA	-18	NA	13785049	13817228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_59813.known	chr20	+	933	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	48.041905575841	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	29	True	NA	10	True	AATAAA	-18	NA	13785087	13817228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_5982.known	chr1	+	1960	3	FSM	ENSG00000118655.7	ENST00000648795.1	1960	3	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	25	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAACTTAATCTGTTTAA	-9	True	NA	15	True	ATTAAA	-18	NA	113905332	113912464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113905776_113908008_113908192_113911130
transcript_59820.nnic	chr20	+	920	9	NIC	ENSG00000101247.18	novel	991	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	55.1802444267874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-6	True	NA	10	True	AATAAA	-18	NA	13785052	13817228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_59825.nnic	chr20	-	3008	4	NNC	ENSG00000125848.10	novel	4977	3	NA	NA	-24	-2129	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	16.0831174424198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCTGAATGGCTGAAT	-5	True	NA	-1	True	AATAAA	-15	NA	14337638	14325116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_14327559_14328063_14328201_14329133_14329328_14337403
transcript_59826.known	chr20	-	4977	3	FSM	ENSG00000125848.10	ENST00000341420.5	4977	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTTTTCCACACAGA	-2	True	NA	NA	False	ATTAAA	-19	NA	14337612	14322984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_14327559_14329133_14329328_14337403
transcript_59827.known	chr20	-	4776	2	FSM	ENSG00000125848.10	ENST00000378053.3	4776	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGTTTTCCACAC	2	True	NA	NA	False	ATTAAA	-16	NA	14337608	14322987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_14327559_14337403
transcript_59829.known	chr20	-	617	2	FSM	ENSG00000125848.10	ENST00000462077.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAATTAAGCTACACAAA	-4	True	NA	-44	True	NA	NA	NA	14337614	14328921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_14329328_14337403
transcript_59830.known	chr20	-	5276	26	FSM	ENSG00000089177.19	ENST00000354981.7	5276	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_24	14.8431802522236	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTAGCTCAGCTTATTT	2	True	NA	-16	True	ATTAAA	-18	NA	16573448	16272103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_16273412_16312334_16312419_16335925_16336016_16356329_16356453_16370585_16370637_16371664_16371762_16374256_16374410_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
transcript_59834.known	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	396.736968560055	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	NA	False	NA	20	True	AATAAA	-17	NA	16729960	16741776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_59836.known	chr20	+	2411	7	FSM	ENSG00000125870.11	ENST00000246071.8	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	818	junction_1	421.929167304445	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGAGTTTGGGCAATT	4	True	NA	NA	False	AATAAA	-23	NA	16730025	16742564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_59844.nic	chr20	+	530	4	ISM	ENSG00000125870.11	ENST00000246071.8	2411	7	-41	5226	24	-4438	5prime_fragment	FALSE	canonical	3	818	junction_1	544.230547552128	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGCCAAAAC	NA	False	NA	NA	False	AAGAAA	-9	NA	16729984	16737338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260
transcript_59846.known	chr20	+	4691	12	FSM	ENSG00000125851.10	ENST00000262545.7	4691	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	2.64418901313618	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGAGATGTGCTATAT	2	True	NA	NA	False	AATAAA	-18	NA	17227039	17484578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17227483_17260239_17260345_17358326_17358441_17360531_17360641_17369239_17369278_17409262_17409340_17429434_17429524_17436707_17436884_17453741_17453958_17456347_17456449_17465325_17465554_17481583
transcript_59848.known	chr20	+	1853	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1175.03986634497	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	-10	True	NA	29	True	AATAAA	-19	NA	17570081	17608242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
transcript_59851.known	chr20	+	3405	4	FSM	ENSG00000125868.16	ENST00000246069.12	3405	4	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_3	189.506376321924	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCTTGACTGTGAAGT	-17	True	NA	3	True	AATAAA	-20	NA	17570074	17609919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17607036
transcript_59857.known	chr20	-	4737	23	FSM	ENSG00000125844.17	ENST00000246043.8	4737	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.857029119548	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTCTCGTCTGGTCTT	NA	False	NA	-5	True	ATTAAA	-21	NA	17660507	17613677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595
transcript_59858.known	chr20	-	5049	25	FSM	ENSG00000125844.17	ENST00000377813.6	5049	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	163.157643604787	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGTCTCGTCTGGTCT	9	True	NA	-6	True	ATTAAA	-20	NA	17682242	17613678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17660529_17679998_17680076_17682027
transcript_59868.known	chr20	-	2288	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_13	125.901295047647	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	NA	False	NA	-24	True	AATAAA	-20	NA	17968980	17941596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
transcript_59873.known	chr20	-	2025	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_12	191.521466739951	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-9	True	NA	-24	True	AATAAA	-20	NA	17968800	17941596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
transcript_5989.nnic	chr1	-	715	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_4	10.9544511501033	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032223	114014903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032039
transcript_59899.known	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	103.939886472903	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	15	True	NA	13	True	AATAAA	-22	NA	17969072	17991122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
transcript_599.known	chr1	-	945	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	41.1398808447274	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATGCTCTTCAT	-47	False	NA	-21	True	CATAAA	-14	NA	9943407	9930252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_59900.known	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.9821314541096	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	0	True	NA	13	True	AATAAA	-22	NA	17969017	17991122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
transcript_59903.nnic	chr20	+	2223	4	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	-132	-7	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	101.621301354041	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGCTTTGGTTTTGT	787	False	NA	6	True	AATAAA	-15	NA	17968885	17991115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_17969142_17969800_17970371_17975683_17975904_17989938
transcript_59904.nic	chr20	+	2079	4	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	104.907366545708	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	18	True	NA	13	True	AATAAA	-22	NA	17968949	17991122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_17969142_17969800_17970371_17988165_17988299_17989938
transcript_59906.known	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	114	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	14	True	NA	13	True	AATAAA	-22	NA	17969114	17991122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17969142_17969800_17970371_17989938
transcript_59908.known	chr20	+	740	3	FSM	ENSG00000125871.14	ENST00000467391.1	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	112.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAATTTGTTGAAATG	33	False	NA	NA	False	NA	NA	NA	17970056	17990231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_17970371_17988165_17988299_17989938
transcript_59910.nic	chr20	+	739	2	ISM	ENSG00000125871.14	ENST00000377710.10	2231	5	26	20681	26	-19790	5prime_fragment	FALSE	canonical	3	244	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTTTGGTTTTGTTTTT	-14	True	NA	10	True	AATAGA	-21	NA	17969043	17970441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_17969142_17969800
transcript_59914.known	chr20	+	3917	12	FSM	ENSG00000149474.15	ENST00000678777.1	3917	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	151.815841027137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTAGGTGTTCTCAAA	-13	True	NA	-24	True	NA	NA	NA	18137848	18188327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18183534_18183582_18184601_18184793_18187285
transcript_59915.known	chr20	+	3927	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	103.96080992374	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGCGTCAATCTAGTC	NA	False	NA	23	True	AATAAA	-24	NA	18137841	18188374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_59924.known	chr20	+	1151	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	1	True	NA	12	True	AATAAA	-18	NA	18137862	18143169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18138052_18142207
transcript_59926.nnic	chr20	+	2668	7	NIC	ENSG00000125846.16	novel	2654	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	15.607156478146	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	-12	True	NA	17	True	AATAAA	-25	NA	18288525	18316996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305667_18305808_18306297_18306394_18315068
transcript_59927.known	chr20	+	2654	7	FSM	ENSG00000125846.16	ENST00000425686.3	2654	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	14.0880169726694	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	-11	True	NA	17	True	AATAAA	-25	NA	18288526	18316996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_5993.known	chr1	+	1934	4	FSM	ENSG00000116774.12	ENST00000369551.5	1934	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.231579774185	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	-28	True	NA	17	True	ATTAAA	-18	NA	113979440	113982254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113979631_113979974_113980127_113980331_113980618_113980948
transcript_59931.known	chr20	+	2717	6	FSM	ENSG00000125846.16	ENST00000396026.7	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7556339129849	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18297984_18298063_18305007_18305179_18305680_18305808_18306297_18306394_18315071
transcript_59934.known	chr20	+	2318	5	FSM	ENSG00000125846.16	ENST00000628216.2	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	16.8893457540545	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	-27	True	NA	12	True	AATAAA	-20	NA	18288510	18316991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18297984_18298063_18305680_18305808_18306297_18306394_18315068
transcript_59935.nnic	chr20	+	2392	5	NIC	ENSG00000125846.16	novel	2660	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	18.1659021245849	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	2	True	NA	17	True	AATAAA	-25	NA	18288539	18316996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_18288605_18289898_18290075_18305680_18305808_18306297_18306394_18315068
transcript_59936.nnic	chr20	+	2400	5	NIC	ENSG00000125846.16	novel	2654	7	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	18.417043736713	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	2	True	NA	17	True	AATAAA	-25	NA	18288539	18316996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_18288605_18305007_18305179_18305667_18305808_18306297_18306394_18315068
transcript_59937.known	chr20	+	2642	5	FSM	ENSG00000125846.16	ENST00000401790.5	2642	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.6424902109607	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_59938.known	chr20	+	523	4	FSM	ENSG00000125846.16	ENST00000434018.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.779617264871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTCCTGAGGGAGAAG	-9	True	NA	NA	False	NA	NA	NA	18288528	18315279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18315068
transcript_59939.nnic	chr20	+	2245	4	NIC	ENSG00000125846.16	novel	2318	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	13.8884444373331	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	-27	True	NA	17	True	AATAAA	-25	NA	18288510	18316996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315068
transcript_59941.known	chr20	+	1999	2	FSM	ENSG00000125846.16	ENST00000630056.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	-9	True	NA	15	True	AATAAA	-23	NA	18288528	18316994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18288605_18315071
transcript_59946.nic	chr20	-	1824	14	NIC	ENSG00000089091.16	novel	3498	21	NA	NA	-37	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	12.5330332751861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCAGAGTCTGCTT	NA	False	NA	2	True	AATAAA	-16	NA	18467067	18398343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465378_18466995
transcript_59952.nic	chr20	-	2384	10	NIC	ENSG00000089091.16	novel	3295	20	NA	NA	-62	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	33.7638860322683	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18413284	18383366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
transcript_59954.nnic	chr20	-	1751	7	NNC	ENSG00000089091.16	novel	1709	7	NA	NA	171	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	32.4636548911069	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394532	18383366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18394461
transcript_59957.nic	chr20	-	1846	6	ISM	ENSG00000089091.16	ENST00000476058.5	1709	7	187	0	187	0	3prime_fragment	FALSE	canonical	3	66	junction_5	16.1567323428966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394516	18383366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253
transcript_59958.nnic	chr20	-	1648	6	NNC	ENSG00000089091.16	novel	1709	7	NA	NA	177	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	33.7378126143353	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394526	18383366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394461
transcript_5996.known	chr1	+	1748	3	FSM	ENSG00000116774.12	ENST00000320334.5	1748	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	11.5	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGTGTTTGTTTGG	5	True	NA	16	True	ATTAAA	-17	NA	113979473	113982253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113979631_113980331_113980618_113980948
transcript_59963.known	chr20	-	837	6	FSM	ENSG00000089091.16	ENST00000480488.2	837	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	21.2546465508133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTAAGTGTCTTTTTTTG	-1	True	NA	NA	False	GATAAA	-44	NA	18413222	18393713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
transcript_59969.known	chr20	+	2156	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	15.2868407462104	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTATGGTATTCTGTT	-24	True	NA	NA	False	AATAAA	-21	NA	18467389	18484646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_59971.known	chr20	+	2257	9	FSM	ENSG00000132664.12	ENST00000462997.5	2257	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	41.5990910357426	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	-25	True	NA	NA	False	AATAAA	-18	NA	18467388	18484643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18467672_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_59973.nic	chr20	+	2040	8	NIC	ENSG00000132664.12	novel	2257	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	46.11387856078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	-29	True	NA	NA	False	AATAAA	-18	NA	18467384	18484643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_18467569_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_59977.nnic	chr20	-	2924	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4315203431078	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	1	True	NA	NA	False	ATTAAA	-20	NA	18497253	18486539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_18487692_18488638_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_59978.nnic	chr20	-	2150	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-28	-774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4315203431078	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATACTCTTCATTCCT	1	True	NA	58	True	AATATA	-17	NA	18497253	18487313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_18487692_18488638_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_59979.nnic	chr20	-	2092	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-28	-832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4315203431078	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGACCTCTTTCTCT	1	True	NA	0	True	AAAAAG	-27	NA	18497253	18487371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_18487692_18488638_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_5998.known	chr1	+	2063	2	FSM	ENSG00000116774.12	ENST00000491700.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	22	True	NA	17	True	ATTAAA	-18	NA	113979490	113982254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_113979631_113980331
transcript_59982.known	chr20	+	434	1	FSM	ENSG00000214612.3	ENST00000415286.1	434	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACAAACCATGCTGGGT	32	False	NA	NA	False	NA	NA	NA	18504632	18505066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18504600_18505100
transcript_59984.known	chr20	+	3464	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	110.440442831158	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	2919	False	NA	NA	False	AATATA	-19	NA	18507519	18561415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_59989.known	chr20	+	2680	20	FSM	ENSG00000101310.17	ENST00000643747.1	2680	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	181.729197943098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAAATCTAGATG	-27	True	NA	-2	True	NA	NA	NA	18507889	18561055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524486_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_59990.known	chr20	+	3026	20	FSM	ENSG00000101310.17	ENST00000650089.1	3026	20	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	107.989303871691	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18507973_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_59996.nic	chr20	+	2788	20	NIC	ENSG00000101310.17	novel	3464	20	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	168.125645536249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAAATCTAGATG	2914	False	NA	-2	True	NA	NA	NA	18507514	18561055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_18507670_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_59998.known	chr20	+	3351	20	FSM	ENSG00000101310.17	ENST00000377465.6	3351	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	167.142515532748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18508298_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_6.known	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00019_+_0_600
transcript_60.known	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00171_+_0_500
transcript_60008.known	chr20	+	575	2	FSM	ENSG00000232388.5	ENST00000435844.3	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	1198	junction_1	0	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTTTTCTTTTTTTTT	NA	False	NA	21	True	AATAAA	-21	NA	18567346	18569563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18567597_18569238
transcript_60009.known	chr20	+	490	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	-8	True	NA	18	True	AATAAA	-18	NA	18567431	18569560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18567597_18569235
transcript_60012.known	chr20	+	3953	6	FSM	ENSG00000125821.13	ENST00000377452.4	3953	6	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_4	35.3417600014487	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGAGAATGGGGTGGAC	-1	True	NA	NA	False	NA	NA	NA	18588053	18766644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359
transcript_60015.known	chr20	+	1040	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	76.8728820846467	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	23	True	NA	58	True	AATACA	-43	NA	20017361	20033655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_60018.known	chr20	+	920	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	284.946924882512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	-29	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
transcript_6002.known	chr1	+	2119	1	FSM	ENSG00000282048.1	ENST00000632517.1	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGACTCACCTGGAA	15	False	NA	27	True	AATAAA	-16	NA	114032392	114034511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_114032400_114034500
transcript_60020.known	chr20	+	1000	5	FSM	ENSG00000173418.12	ENST00000480550.1	1000	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	312.241493078675	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20	True	NA	32	True	TATAAA	-35	NA	20017358	20033629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20025668_20025768_20026783_20026920_20032507_20032654_20033101
transcript_60024.known	chr20	+	1036	6	FSM	ENSG00000173418.12	ENST00000463154.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	284.530771622333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	9	True	NA	32	True	TATAAA	-35	NA	20017347	20033629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_20017450_20022455_20022481_20025668_20025768_20026783_20026920_20032507_20032654_20033101
transcript_60025.known	chr20	-	4015	14	FSM	ENSG00000101343.15	ENST00000536226.2	4015	14	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_11	24.6749279838041	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTTGTGGGTTTTTC	-16	True	NA	NA	False	AGTAAA	-24	NA	20052466	20034367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_20036363_20037322_20037572_20038348_20038451_20039608_20039849_20040685_20040767_20041565_20041626_20042324_20042517_20043491_20043663_20045307_20045487_20047764_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
transcript_60030.known	chr20	-	1155	2	FSM	ENSG00000225127.4	ENST00000668193.1	1155	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	3997	False	NA	NA	False	AATAAA	-16	NA	21102383	21092808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_21093853_21102272
transcript_60035.nic	chr20	+	2155	13	NIC	ENSG00000088970.16	novel	2102	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_7	44.3552577366978	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21125974	21246622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_60037.known	chr20	+	2102	13	FSM	ENSG00000088970.16	ENST00000619189.5	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	36.263981977837	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	-3	True	NA	NA	False	AATAAA	-20	NA	21126081	21246622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_6004.known	chr1	-	1897	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_7	86.9332373439644	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	18	False	NA	15	True	NA	NA	NA	114153850	114091764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_60042.known	chr20	+	2014	12	FSM	ENSG00000088970.16	ENST00000620891.4	2014	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	64.0851706006085	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	2	True	NA	NA	False	AATAAA	-20	NA	21126006	21246622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21126205_21132096_21132160_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_60052.nnic	chr20	+	800	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-27998	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	67.20635295529	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	-16	True	NA	NA	False	AATAAA	-20	NA	21190460	21246622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_21190545_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_60054.nic	chr20	+	1676	7	ISM	ENSG00000088970.16	ENST00000619189.5	2102	13	-107	40949	-8	-27241	5prime_fragment	FALSE	canonical	3	139	junction_4	32.704484911604	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGGCCAGGCGCCGT	NA	False	NA	NA	False	TTTAAA	-13	NA	21125974	21205673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490
transcript_60055.nic	chr20	+	1965	7	ISM	ENSG00000088970.16	ENST00000619189.5	2102	13	-107	40660	-8	-26952	5prime_fragment	FALSE	canonical	3	139	junction_4	32.704484911604	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGATGTGCAGATTA	NA	False	NA	NA	False	NA	NA	NA	21125974	21205962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490
transcript_60064.known	chr20	+	1397	9	FSM	ENSG00000088970.16	ENST00000621366.1	1397	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	46.7252608339429	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21162082	21246622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_60065.known	chr20	-	391	1	FSM	ENSG00000214535.3	ENST00000457423.1	391	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	NA	False	NA	NA	False	AAAACA	-35	NA	21166596	21166205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_21166200_21166600
transcript_60071.known	chr20	+	3408	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	0	0	0	0	multi-exon	TRUE	canonical	3	856	junction_5	86.7217590679426	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	-6	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_60074.nnic	chr20	+	3646	30	NNC	ENSG00000088930.8	novel	3408	30	NA	NA	456	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	197.441518908316	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	-29	True	NA	25	True	AATAAA	-19	NA	21303786	21389825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_21304168_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_60086.nic	chr20	+	1387	14	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-55	50751	-55	-50751	5prime_fragment	FALSE	canonical	3	856	junction_5	68.7188767637295	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAATGAAGGTGAGT	NA	False	NA	25	True	AAGAAA	-4	NA	21303275	21339074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043
transcript_60102.known	chr20	+	693	4	FSM	ENSG00000234435.3	ENST00000449427.3	693	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTGTGGTATTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	22054073	22074654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_22054285_22068438_22068689_22073387_22073467_22074501
transcript_60103.nnic	chr20	-	2087	5	NNC	ENSG00000259974.4	novel	1840	5	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	41.5150575092941	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGTATTTCTTTGCA	6879	False	NA	NA	False	AATAAA	-16	NA	22578611	22560552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_22561096_22563894_22565117_22566682_22566811_22567793_22567886_22578509
transcript_60105.known	chr20	-	907	4	ISM	ENSG00000259974.4	ENST00000638550.3	1840	5	5	3948	5	-3709	5prime_fragment	FALSE	canonical	3	87	junction_1	7.58653778449403	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAGTCTTCTGTGACTA	1	True	NA	-5	True	AATAAA	-15	NA	22578580	22564500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_22565117_22566682_22566811_22567793_22567886_22578509
transcript_60110.known	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	-9	True	NA	15	True	AATACA	-14	NA	23350790	23354771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_23351062_23353980
transcript_60111.known	chr20	-	514	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	170	8	103	0	multi-exon	FALSE	canonical	2	7	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	4713	False	NA	NA	False	AATAAA	-16	NA	23358005	23356593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23356970_23357050_23357138_23357954
transcript_60112.known	chr20	+	4834	6	FSM	ENSG00000125812.16	ENST00000338121.10	4834	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	8.84081444212014	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGGGTACTTGTCAAT	-2	True	NA	NA	False	AATAAA	-34	NA	23362181	23373062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_23362238_23364362_23365748_23367002_23367098_23368761_23368930_23369583_23369742_23370090
transcript_60113.known	chr20	-	3837	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	27.7562605550532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-33	True	NA	-1	True	AATAAA	-19	NA	23421488	23374521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
transcript_60116.known	chr20	-	3824	10	FSM	ENSG00000125814.17	ENST00000398425.7	3824	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_7	27.1129325435503	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	-64	True	NA	2	True	AATAAA	-22	NA	23421519	23374518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23397071_23397189_23402992_23403073_23421304
transcript_60119.nic	chr20	-	3658	9	NIC	ENSG00000125814.17	novel	3837	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	19.4578872182979	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-18	True	NA	-1	True	AATAAA	-19	NA	23421473	23374521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23402992_23403073_23421304
transcript_60124.known	chr20	-	1651	7	FSM	ENSG00000125814.17	ENST00000472855.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	21.1633855724666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAACTAAGTAGTGAG	41	True	NA	NA	False	ATTAAA	-13	NA	23421414	23378798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23402992_23403073_23421304
transcript_60125.known	chr20	-	576	3	FSM	ENSG00000125831.10	ENST00000377009.8	576	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAAGATCGTGATTC	-5	True	NA	NA	False	AATAAA	-15	NA	23452876	23450411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23450590_23451815_23451921_23452583
transcript_60126.known	chr20	-	461	2	FSM	ENSG00000125831.10	ENST00000377007.3	461	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGTGATTCCACTTTTTT	14	False	NA	NA	False	AATAAA	-24	NA	23452857	23450402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23450590_23452583
transcript_6013.known	chr1	-	1275	7	FSM	ENSG00000116752.6	ENST00000369541.4	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_3	71.8625230716416	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAGGCGGTTACTGT	0	True	NA	-13	True	AATAAA	-23	NA	114581615	114567556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
transcript_60130.known	chr20	-	749	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	2	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-1	True	NA	NA	False	ATTAAA	-14	NA	23750935	23747561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_23747900_23749015_23749130_23750638
transcript_60134.known	chr20	+	2092	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	17.2819751957543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	-38	True	NA	45	True	NA	NA	NA	24469628	24666616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
transcript_60137.nnic	chr20	+	1964	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	216	-84	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	21.0449254902195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGCTGTTTTACGAG	119	False	NA	23	True	NA	NA	NA	24469844	24666532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_60138.nnic	chr20	+	2048	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	216	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	21.0449254902195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	119	False	NA	45	True	NA	NA	NA	24469844	24666616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_60142.known	chr20	-	2117	10	FSM	ENSG00000101474.12	ENST00000451442.5	2117	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	270.576522117104	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	136	False	NA	-4	True	AATAAA	-34	NA	24992642	24962924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_24964023_24964374_24964399_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_60145.known	chr20	-	2202	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	56.0600961023079	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	27	False	24992778	-4	True	AATAAA	-34	NA	24992751	24962924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_60149.nnic	chr20	-	2030	8	NIC	ENSG00000101474.12	novel	2202	9	NA	NA	-40	-19	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	221.681698636139	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGCTGATTAACCTTTT	NA	False	NA	-23	True	AATAAA	-15	NA	24992791	24962943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_24964023_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_60150.nic	chr20	-	1148	8	ISM	ENSG00000101474.12	ENST00000217456.3	2202	9	-40	5963	-40	-5963	5prime_fragment	FALSE	canonical	3	580	junction_1	56.926017150082	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAAAACTGTTATTCCA	NA	False	NA	0	True	ATTAAA	-20	NA	24992791	24968887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_60156.known	chr20	+	4104	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	75.9804284681528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGTGTCCAAAAATTTAT	-12	True	NA	NA	False	NA	NA	NA	25195711	25228075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_60157.nic	chr20	+	2675	14	NIC	ENSG00000197586.13	novel	2654	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	82	junction_2	88.0249426727696	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-31	True	NA	36	True	AATAAA	-29	NA	25195692	25226729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_6016.known	chr1	-	891	6	FSM	ENSG00000116752.6	ENST00000485021.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	277.031406161828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAATATTGTGTCATAG	13	False	114581642	47	True	CATAAA	-37	NA	114581629	114567883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114581298_114581392_114581498
transcript_60160.known	chr20	+	2708	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	72.3440988543866	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-31	True	NA	36	True	AATAAA	-29	NA	25195692	25226729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_60165.nic	chr20	+	2427	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_11	94.406037942496	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-29	True	NA	36	True	AATAAA	-29	NA	25195694	25226729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_60166.nic	chr20	+	2384	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	72.9438520751102	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-29	True	NA	36	True	AATAAA	-29	NA	25195694	25226729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_60170.nic	chr20	+	2282	12	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	87.8350256761913	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-29	True	NA	36	True	AATAAA	-29	NA	25195694	25226729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_60173.known	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_10	31.8025417545495	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	10	True	NA	34	True	ATTAAA	-24	NA	25248084	25298012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
transcript_60174.known	chr20	-	1960	13	FSM	ENSG00000100997.20	ENST00000339157.10	1960	13	0	0	0	0	multi-exon	TRUE	canonical	1	320	junction_4	179.691150929093	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTCTCTGCAGCGC	-12	True	NA	-21	True	AATAAA	-16	NA	25390835	25300213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_25300885_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
transcript_60178.nnic	chr20	+	2085	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	191.655089860373	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAATCTGAATGCCTTT	-34	True	NA	17	True	AATAAA	-17	NA	25407662	25448556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25446849_25448077
transcript_60180.nnic	chr20	+	2178	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	191.655089860373	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-34	True	NA	24	True	AATAAA	-24	NA	25407662	25448563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25446940_25448082
transcript_60182.nnic	chr20	+	2299	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	191.655089860373	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-34	True	NA	24	True	AATAAA	-24	NA	25407662	25448563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447061_25448082
transcript_60183.nnic	chr20	+	2285	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	191.655089860373	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-34	True	NA	24	True	AATAAA	-24	NA	25407662	25448563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447067_25448102
transcript_60184.known	chr20	+	3311	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	33.0689515339624	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-24	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
transcript_60193.nic	chr20	+	1648	4	ISM	ENSG00000101003.10	ENST00000262460.5	3311	7	-10	29208	-10	1160	5prime_fragment	FALSE	canonical	3	544	junction_3	9.2736184954957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATTCAATGTGTTTGC	-34	True	NA	NA	False	AAGAAA	-10	NA	25407662	25419355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104
transcript_60196.nic	chr20	+	2145	2	ISM	ENSG00000101003.10	ENST00000262460.5	3311	7	-10	32862	-10	-1545	5prime_fragment	FALSE	canonical	3	547	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATGCCTGTCCCTGGC	-34	True	NA	NA	False	NA	NA	NA	25407662	25415701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_25407896_25413789
transcript_60197.known	chr20	-	3803	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTCATCTCTTT	-32	True	NA	NA	False	AATAAA	-18	NA	25624014	25612934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_25616582_25623858
transcript_60211.known	chr20	-	4237	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	8.57321409974112	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGGACACTGACAG	-8	True	NA	NA	False	ATTAAA	-16	NA	25696853	25673194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
transcript_60220.nic	chr20	-	1054	10	FSM	ENSG00000282826.3	ENST00000687441.1	1098	10	43	1	0	0	multi-exon	FALSE	canonical	3	26	junction_1	25.5217167269633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	42	False	NA	-3	True	AATAAA	-27	NA	28602773	28580632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_60223.known	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	26	junction_1	24.6421260243511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	17	True	NA	-79	True	AAAAAG	-37	NA	28602664	28580708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_60225.nic	chr20	-	2199	9	NIC	ENSG00000282826.3	novel	1102	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_1	21.6967739537471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTGAGTTGTTGTGA	-4	True	NA	-5	True	AATAAA	-25	NA	28602769	28580634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_28582030_28583018_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_60227.known	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	33	junction_7	21.7873242964803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	4	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_60228.nic	chr20	-	2122	8	NIC	ENSG00000282826.3	novel	1102	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_1	20.9965983639527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTGAGTTGTTGTGA	-4	True	NA	-5	True	AATAAA	-25	NA	28602769	28580634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_60229.nic	chr20	-	861	8	FSM	ENSG00000282826.3	ENST00000686484.1	875	8	11	3	0	0	multi-exon	FALSE	canonical	3	49	junction_1	18.688641098872	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-17	True	NA	0	True	TATAAA	-16	NA	28602832	28583024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_60231.nic	chr20	-	925	8	ISM	ENSG00000282826.3	ENST00000687441.1	1098	10	-57	2393	-17	0	5prime_fragment	FALSE	canonical	3	33	junction_6	21.1708309150268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	NA	False	NA	0	True	TATAAA	-16	NA	28602873	28583024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_60233.nic	chr20	-	732	7	ISM	ENSG00000282826.3	ENST00000684933.1	1048	10	52	2390	-7	0	5prime_fragment	FALSE	canonical	3	51	junction_6	14.7845640224301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	35	False	NA	0	True	TATAAA	-16	NA	28602780	28583024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_60234.nnic	chr20	-	618	6	FSM	ENSG00000282826.3	ENST00000693358.1	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	23.9633052812003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	42	False	NA	0	True	TATAAA	-16	NA	28602773	28583024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28600391_28600462_28602608
transcript_60239.known	chr20	+	1585	13	FSM	ENSG00000101294.18	ENST00000466766.2	1585	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	351.799737856007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCCGGGAGCCAG	-21	True	NA	-13	True	AAGAAA	-11	NA	31514454	31569444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31527921_31528051_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_60240.known	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	341.59596829523	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	-34	True	NA	24	True	ATTAAA	-18	NA	31514441	31569543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
transcript_60241.known	chr20	+	1809	13	FSM	ENSG00000101294.18	ENST00000674240.1	1809	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_11	330.473145656345	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514427	31569567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
transcript_60243.known	chr20	+	1606	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_3	79.9821261024472	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514427	31569567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_60250.nic	chr20	+	1552	11	NIC	ENSG00000101294.18	novel	1606	12	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_7	280.050281199645	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514397	31569567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_6027.known	chr1	-	4326	7	FSM	ENSG00000213281.5	ENST00000369535.5	4326	7	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_3	61.4882554278096	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATATTCACTGAAGTG	-20	True	NA	-11	True	AATAAA	-28	NA	114716771	114704468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
transcript_60277.known	chr20	+	757	7	FSM	ENSG00000101294.18	ENST00000494153.5	757	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	357.911845136325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGCATCAGCATCGAA	1320	False	NA	NA	False	NA	NA	NA	31548780	31569174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31549115_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_60282.known	chr20	+	983	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	1	True	NA	12	True	ATTAAA	-19	NA	31605288	31606510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31605814_31606052
transcript_60283.known	chr20	+	1233	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTGACTTCTTGGGT	-5	True	NA	17	True	ATTAAA	-24	NA	31605282	31606515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31605300_31606500
transcript_60284.known	chr20	-	2227	3	FSM	ENSG00000171552.14	ENST00000422920.2	2227	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	82.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTAGGGTGGCCCTTGC	-10	True	NA	NA	False	GGGGCT	-26	NA	31723529	31665258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721843_31722331_31722617
transcript_60287.known	chr20	-	2496	3	FSM	ENSG00000171552.14	ENST00000376055.9	2496	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	66	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	969	False	NA	NA	False	AATAAA	-25	NA	31722973	31664451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721843_31722349_31722617
transcript_60289.nnic	chr20	-	2455	3	NNC	ENSG00000171552.14	novel	2441	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	191	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-13	True	NA	NA	False	AATAAA	-19	NA	31722566	31664457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_31666087_31721654_31722331_31722416
transcript_60291.known	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	109.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-10	True	NA	NA	False	AATAAA	-14	NA	31723529	31664462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722331_31722617
transcript_60292.known	chr20	-	2544	3	FSM	ENSG00000171552.14	ENST00000678563.1	2544	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	178.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-36	True	NA	NA	False	AATAAA	-14	NA	31723978	31664462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722331_31723734
transcript_60293.known	chr20	-	2413	3	FSM	ENSG00000171552.14	ENST00000676942.1	2413	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-18	True	NA	NA	False	AATAAA	-14	NA	31723960	31664462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722331_31723847
transcript_60294.known	chr20	-	2426	3	FSM	ENSG00000171552.14	ENST00000439267.2	2426	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	187.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723989	31664462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722331_31723863
transcript_60295.known	chr20	-	2574	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	126	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-1	True	NA	NA	False	AATAAA	-19	NA	31722868	31664457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31722617
transcript_60296.known	chr20	-	2562	3	FSM	ENSG00000171552.14	ENST00000456404.6	2562	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-36	True	NA	NA	False	AATAAA	-14	NA	31723978	31664462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31723734
transcript_60297.known	chr20	-	2444	3	FSM	ENSG00000171552.14	ENST00000420488.6	2444	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	201	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723989	31664462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31723863
transcript_60298.known	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	205	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-13	True	NA	NA	False	AATAAA	-14	NA	31722566	31664462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654_31722349_31722443
transcript_60299.known	chr20	-	2578	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	1345	False	NA	NA	False	AATAAA	-25	NA	31722597	31664451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31666087_31721654
transcript_60301.known	chr20	+	3605	19	FSM	ENSG00000088325.16	ENST00000340513.4	3605	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	286.555840980427	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTTGATGTTTTT	-27	True	NA	31	True	AATAAA	-25	NA	31739270	31801805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31780938_31781047_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_60303.nnic	chr20	+	3235	18	NNC	ENSG00000088325.16	novel	3473	18	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	212.630875635117	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	168	False	NA	26	True	AATAAA	-20	NA	31739253	31801800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_31739348_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_60307.known	chr20	+	3473	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_14	55.5342719707551	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	-8	True	NA	26	True	AATAAA	-20	NA	31739289	31801800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_60311.nnic	chr20	+	3488	18	NNC	ENSG00000088325.16	novel	3473	18	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_16	202.63438020613	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	168	False	NA	26	True	AATAAA	-20	NA	31739253	31801800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798385_31798553_31800969
transcript_60315.nic	chr20	+	2467	16	ISM	ENSG00000088325.16	ENST00000300403.11	3473	18	-36	4308	-17	-4308	5prime_fragment	FALSE	canonical	3	828	junction_14	52.8846123387723	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGAAGAAATCAGTTG	168	False	NA	NA	False	NA	NA	NA	31739253	31797492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403
transcript_60320.nic	chr20	+	1854	12	ISM	ENSG00000088325.16	ENST00000300403.11	3473	18	-36	17983	-17	-17983	5prime_fragment	FALSE	canonical	3	846	junction_9	53.3502383676427	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAAAAGAATCCAGGAG	168	False	NA	-19	True	NA	NA	NA	31739253	31783817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704
transcript_60323.nic	chr20	+	1478	10	ISM	ENSG00000088325.16	ENST00000340513.4	3605	19	-17	22942	-17	-22937	5prime_fragment	FALSE	canonical	3	846	junction_9	32.8411816151085	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAAGAACATTTGA	168	False	NA	NA	False	NA	NA	NA	31739253	31778863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812
transcript_60329.known	chr20	-	1957	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	31.1317763707759	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTTGTCCAGTGTGA	-22	True	NA	-2	True	AATAAA	-26	NA	31952046	31944336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
transcript_60332.known	chr20	+	651	1	FSM	ENSG00000278012.1	ENST00000616850.1	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTTTTTACCTGC	1076	False	NA	8	True	ATTAAA	-23	NA	31970180	31970831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_31970200_31970800
transcript_60334.known	chr20	+	1742	13	FSM	ENSG00000101336.18	ENST00000518730.5	1742	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	4.58863329931207	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGACCAGGGCAGGG	16	True	NA	NA	False	NA	NA	NA	32052260	32101519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073718_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_60337.known	chr20	+	3768	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	39.534225897329	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	-12	True	NA	20	True	AATAAA	-17	NA	32109713	32167256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_60339.nnic	chr20	+	2078	18	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_17	69.294367322031	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTCTTGAATCTCA	-1	True	NA	19	True	AATAAA	-16	NA	32109724	32167255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32166972
transcript_60345.known	chr20	+	5226	7	FSM	ENSG00000101346.14	ENST00000375749.8	5226	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	7.36545993132812	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATTTTACCAGTCTAG	-21	True	NA	22	True	AATAAA	-42	NA	32207879	32238658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_60347.known	chr20	-	701	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	1474	False	NA	NA	False	AATAAA	-19	NA	32483582	32464779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_32465118_32474600_32474743_32483361
transcript_60349.known	chr20	-	1343	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	124.036033071039	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGATCCAGTTG	11	True	NA	58	True	AATAAA	-13	NA	32743455	32702702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
transcript_60353.nic	chr20	+	2614	8	ISM	ENSG00000088305.18	ENST00000328111.6	4336	23	18101	14998	634	-13711	internal_fragment	FALSE	canonical	3	1488	junction_3	108.787754412912	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAACAGAAAC	68	False	NA	NA	False	NA	NA	NA	32780485	32794358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535
transcript_6036.known	chr1	-	2667	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_18	1107.431189513	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTTAAGGTGGCGCC	3	True	NA	6	True	AATAAA	-45	NA	114757982	114717956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
transcript_60365.known	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1281	junction_3	132.653265654822	1273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	-14	True	NA	22	True	AATAAA	-20	NA	32819953	32850405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
transcript_60380.known	chr20	+	2131	1	FSM	ENSG00000260257.2	ENST00000569087.2	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGGTTCTGTGATT	507	False	NA	10	True	AATAAA	-20	NA	32856620	32858751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_32856600_32858800
transcript_60388.nnic	chr20	-	1867	14	NNC	ENSG00000101391.21	novel	2164	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_13	90.5889996848697	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-18	True	NA	-15	True	ATTAAA	-21	NA	33401538	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396853_33401427
transcript_60389.known	chr20	-	1930	14	FSM	ENSG00000101391.21	ENST00000473997.5	1930	14	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_13	91.3401212582909	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	3	True	NA	-15	True	ATTAAA	-21	NA	33401517	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396937_33401427
transcript_60390.known	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_13	37.771502360014	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	1	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_60399.known	chr20	-	1891	13	FSM	ENSG00000101391.21	ENST00000339269.5	1891	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	95.19526715593	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	7612	False	NA	-15	True	ATTAAA	-21	NA	33401561	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_6040.known	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_17	878.392165178943	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	11	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
transcript_60405.nic	chr20	-	1674	12	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	95.1987047623535	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	7632	False	NA	-15	True	ATTAAA	-21	NA	33401541	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33401427
transcript_60412.nic	chr20	-	1645	11	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	99.2520024986902	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	7626	False	NA	-15	True	ATTAAA	-21	NA	33401547	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33401427
transcript_60420.nic	chr20	-	1434	10	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	139.875341326165	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	7626	False	NA	-15	True	ATTAAA	-21	NA	33401547	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33392141_33392243_33401427
transcript_60427.known	chr20	-	840	6	FSM	ENSG00000101391.21	ENST00000482967.5	840	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	150.229158288263	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	16	True	NA	-15	True	ATTAAA	-21	NA	33401504	33358838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33401427
transcript_60432.known	chr20	-	5690	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTGTATATATTTT	-42	True	NA	NA	False	AATAAA	-17	NA	33720310	33702757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
transcript_60433.nic	chr20	+	610	3	ISM	ENSG00000125970.12	ENST00000246194.8	6213	10	83126	4623	-176	2581	3prime_fragment	FALSE	canonical	3	1371	junction_2	81.5	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGAGATGGGATGG	NA	False	NA	20	True	AATAAA	-16	NA	34077036	34080261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_34077246_34078504_34078554_34079909
transcript_60434.known	chr20	-	2485	2	FSM	ENSG00000285230.3	ENST00000668968.2	2537	2	52	0	-1	0	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACACCCACCTTTGGGG	-6	True	NA	NA	False	GATAAA	-9	NA	33993135	33990496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_33992906_33993059
transcript_60441.known	chr20	-	2556	9	FSM	ENSG00000125977.7	ENST00000374980.3	2556	9	0	0	0	0	multi-exon	FALSE	canonical	3	3441	junction_8	398.939042179379	1998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGCTCCATTGCTTTTG	-14	True	NA	-10	True	AATAAA	-26	NA	34112243	34088308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_60445.nnic	chr20	-	1410	8	NIC	ENSG00000125977.7	novel	2556	9	NA	NA	-42	-1131	combination_of_known_splicesites	FALSE	canonical	3	139	junction_2	1457.28224823485	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAATTTGGTTTGTC	NA	False	NA	-14	True	ATTAAA	-17	NA	34112285	34089439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34089906_34090516_34090603_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_60451.nic	chr20	-	613	4	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-106	10248	-106	-10248	5prime_fragment	FALSE	canonical	3	3441	junction_3	345.372262927989	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAGAAGAATGTTA	NA	False	NA	NA	False	AATAAA	-3	NA	34112349	34098556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_34098634_34103461_34103566_34105367_34105546_34112095
transcript_60454.nic	chr20	-	425	3	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-50	15208	-50	-15208	5prime_fragment	FALSE	canonical	3	3441	junction_2	73.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAAACTAAAAAGA	NA	False	NA	NA	False	AAGAAA	-3	NA	34112293	34103516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_34103566_34105367_34105546_34112095
transcript_60459.known	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_6	121.566117761712	2518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-2	True	NA	-4	True	AATAAA	-18	NA	34303355	34280267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_60460.known	chr20	-	2211	9	FSM	ENSG00000101444.13	ENST00000480653.5	2211	9	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_5	128.508693772056	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTTGAGCCTTTATT	8501	False	NA	-6	True	AATAAA	-16	NA	34303317	34280269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34281166_34285439_34285635_34290331_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_60461.known	chr20	+	4484	26	FSM	ENSG00000078747.16	ENST00000670516.1	4484	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.2750540354878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTCCATATGGAAAAAAGA	-11	True	NA	-84	True	NA	NA	NA	34363279	34509407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34397207_34397322_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_60462.known	chr20	+	6743	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	6.73287436554569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	-18	True	NA	NA	False	NA	NA	NA	34363272	34511773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_60465.known	chr20	+	2940	24	FSM	ENSG00000078747.16	ENST00000535650.7	2940	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.6247323986311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTTTAGACATTC	-15	True	NA	24	True	NA	NA	NA	34363275	34508115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_60467.known	chr20	+	205	2	FSM	ENSG00000078747.16	ENST00000479215.1	205	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGAGAGCAGTGTTG	4	True	NA	NA	False	NA	NA	NA	34363294	34369543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34363350_34369393
transcript_60469.known	chr20	+	1053	5	FSM	ENSG00000125971.17	ENST00000480759.1	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	372.317992447316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	2	True	NA	27	True	ACTAAA	-18	NA	34516413	34540958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34516462_34526267_34526344_34529851_34530235_34534627_34534796_34540580
transcript_60471.nnic	chr20	+	769	5	NNC	ENSG00000125971.17	novel	1053	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	411.283585254749	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	785	False	NA	27	True	ACTAAA	-18	NA	34516393	34540958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_34516462_34519419_34519499_34526267_34526344_34534627_34534796_34540580
transcript_60473.known	chr20	+	662	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	110.091880818806	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	10	True	NA	27	True	ACTAAA	-18	NA	34516421	34540958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
transcript_60474.known	chr20	+	1464	3	FSM	ENSG00000125971.17	ENST00000300469.13	1464	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	305.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTATCACTTGAA	32	False	NA	NA	False	ATTAAA	-20	NA	34516443	34531221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_34516462_34526267_34526344_34529851
transcript_60479.known	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_9	13.3627086876529	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	9	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_6048.known	chr1	-	4006	19	FSM	ENSG00000009307.17	ENST00000339438.10	4006	19	0	0	0	0	multi-exon	FALSE	canonical	1	998	junction_7	557.356348098263	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCGCTTTCATTATTGA	2	True	NA	0	True	AATAAA	-28	NA	114757983	114716912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_60483.known	chr20	-	1248	11	FSM	ENSG00000101464.11	ENST00000374820.6	1248	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	60.0400699533237	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGGCACAGGGCTG	16	True	NA	NA	False	NA	NA	NA	34677085	34560865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34657179_34657245_34676955
transcript_60484.nic	chr20	-	1534	11	NIC	ENSG00000101464.11	novel	1639	12	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	59.1169180522801	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	70	False	NA	-12	True	AATAAA	-22	NA	34677131	34560541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34560980_34575103_34575247_34581547_34581673_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_60488.nnic	chr20	-	1400	10	NIC	ENSG00000101464.11	novel	1639	12	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	61.37398009009	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	79	False	NA	-12	True	AATAAA	-22	NA	34677122	34560541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34560980_34575103_34575247_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_6049.known	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	1	513	junction_15	917.208860719752	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	1	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_60491.known	chr20	-	4082	14	FSM	ENSG00000198646.14	ENST00000612493.4	4082	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	16.5600931878577	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGGTGATCAGCTCT	8	True	NA	0	True	AATAAA	-42	NA	34825630	34714774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
transcript_60494.known	chr20	-	2638	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	30.0170869706586	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-15	True	NA	-5	True	ATTAAA	-18	NA	34872856	34844719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
transcript_60495.nic	chr20	-	1515	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	-1	15927	-1	2167	5prime_fragment	FALSE	canonical	3	142	junction_3	3.74165738677394	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGGCAGGGGTTG	15	False	34872872	NA	False	NA	NA	NA	34872857	34860646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
transcript_60497.known	chr20	-	3138	19	FSM	ENSG00000100991.12	ENST00000451813.6	3138	19	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_11	168.993936628756	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021333_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_60498.known	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_11	116.141264027375	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_6050.known	chr1	-	3459	18	FSM	ENSG00000009307.17	ENST00000530886.5	3459	18	0	0	0	0	multi-exon	FALSE	canonical	1	108	junction_16	880.542475922152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGCCTGAAATGAATCT	593	False	NA	30	True	AATAAA	-4	NA	114758027	114717304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114749820_114750208_114757924
transcript_60503.known	chr20	-	1437	13	FSM	ENSG00000100983.12	ENST00000643443.1	1437	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	69.2308437202828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATCCTCTGTATTTGT	25	True	NA	NA	False	NA	NA	NA	34955755	34928805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946052_34951723_34951861_34955726
transcript_60504.known	chr20	-	1909	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	36.0262250157977	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTCCTTACTTCGTG	-26	True	NA	-2	True	AATAAA	-19	NA	34955806	34928431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_60505.known	chr20	-	1940	13	FSM	ENSG00000100983.12	ENST00000643188.1	1940	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	74.4533784025651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTCCCTAATTCTGCC	NA	False	NA	-49	True	NA	NA	NA	34956027	34928478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955869
transcript_60507.known	chr20	-	2131	13	FSM	ENSG00000100983.12	ENST00000642498.1	2131	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	72.8169317916895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	-3	True	NA	-43	True	NA	NA	NA	34955783	34928472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34929238_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_60511.nic	chr20	-	2218	12	NIC	ENSG00000100983.12	novel	1909	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	179	junction_1	37.5365386728344	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-33	True	NA	-3	True	AATAAA	-18	NA	34955813	34928432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34943007_34945952_34946099_34951723_34951861_34955726
transcript_60514.nic	chr20	-	1725	12	NIC	ENSG00000100983.12	novel	1909	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	71.4871542526382	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-33	True	NA	-3	True	AATAAA	-18	NA	34955813	34928432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34928952_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_60515.nic	chr20	-	2364	12	NIC	ENSG00000100983.12	novel	2131	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	187	junction_1	32.8392025350875	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-33	True	NA	-3	True	AATAAA	-18	NA	34955813	34928432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_6052.known	chr1	-	5506	5	FSM	ENSG00000052723.12	ENST00000369528.9	5506	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	103.398500956252	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-22	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780436
transcript_60520.known	chr20	-	1554	10	FSM	ENSG00000100983.12	ENST00000646735.1	1554	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	79.7794800189796	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-5	True	NA	-3	True	AATAAA	-18	NA	34955785	34928432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34945952_34946099_34951723_34951861_34955726
transcript_60523.known	chr20	-	1540	10	FSM	ENSG00000100983.12	ENST00000642538.1	1540	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	83.7413713999873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCTGCCTCCATTTCTA	-8	True	NA	NA	False	GGGGCT	-18	NA	34955788	34928974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_60524.nnic	chr20	-	1948	12	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_5	77.5653283709239	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-30	True	NA	-23	True	AATAAA	-19	NA	35147349	35115363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134104_35134156_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_60527.known	chr20	-	1884	11	FSM	ENSG00000088298.13	ENST00000374492.8	1884	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	26.6315602246658	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-17	True	NA	-23	True	AATAAA	-19	NA	35147336	35115363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_60528.nnic	chr20	-	1920	11	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	62.4032050458949	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTATCATGTTTT	-30	True	NA	-25	True	AATAAA	-17	NA	35147349	35115365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_35115959_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_6053.known	chr1	-	5494	5	FSM	ENSG00000052723.12	ENST00000060969.6	5494	5	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_2	25.1532801041932	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-22	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780448
transcript_60535.nnic	chr20	-	1543	9	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	63.4069199693535	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-30	True	NA	-23	True	AATAAA	-19	NA	35147349	35115363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_60544.known	chr20	-	1756	10	FSM	ENSG00000088298.13	ENST00000374491.3	1756	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	65.665820637528	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	0	True	NA	-23	True	AATAAA	-19	NA	35147319	35115363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35147151
transcript_60549.known	chr20	-	1054	7	FSM	ENSG00000242372.9	ENST00000675032.1	1054	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	572.551429034012	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	7706	False	NA	-12	True	ATTAAA	-32	NA	35284717	35278906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284696
transcript_60550.known	chr20	-	1069	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	0	0	0	multi-exon	FALSE	canonical	3	1248	junction_6	144.77731943306	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATGTGATGTTTGGG	1	True	NA	-23	True	ATTAAA	-21	NA	35284772	35278917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
transcript_60556.known	chr20	-	932	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	546.285273460671	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	7619	False	NA	-16	True	ATTAAA	-28	NA	35284804	35278910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
transcript_60561.known	chr20	-	1017	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	598.255380251611	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	3	True	NA	-16	True	ATTAAA	-28	NA	35284770	35278910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
transcript_60564.known	chr20	+	1349	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	2.86744175568088	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	-11	True	NA	14	True	AATAAA	-19	NA	35172071	35177362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
transcript_60566.known	chr20	-	798	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	767.053380729717	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	9	True	NA	-16	True	ATTAAA	-28	NA	35284523	35278910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
transcript_60570.known	chr20	-	1252	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1371	junction_3	110.694895997964	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	7708	False	NA	-16	True	ATTAAA	-28	NA	35284715	35278910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
transcript_60573.known	chr20	-	2267	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	24.4621148253456	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	8	True	NA	-15	True	AATAAA	-20	NA	35411973	35302577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60578.known	chr20	-	758	9	FSM	ENSG00000101019.22	ENST00000424405.5	758	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	73.0315642376637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGAGCATCCTGAAG	8	True	NA	NA	False	NA	NA	NA	35411973	35303990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35394091_35394197_35411939
transcript_60579.known	chr20	-	2201	9	FSM	ENSG00000101019.22	ENST00000374384.6	2201	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	86.606870397215	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	8	True	NA	-3	True	AATAAA	-32	NA	35411973	35302565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60583.known	chr20	-	2133	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	80.8596667955398	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	1184	False	NA	-3	True	AATAAA	-32	NA	35412031	35302565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
transcript_60587.known	chr20	-	1035	7	FSM	ENSG00000101019.22	ENST00000453855.5	1035	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	94.8784309875889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTTAGAAACTTGCCTG	1255	False	NA	6	True	ATTAAA	-43	NA	35411960	35303432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314708_35381983_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60589.known	chr20	-	2036	7	FSM	ENSG00000101019.22	ENST00000359226.6	2036	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	96.6672413776019	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	11	True	NA	-3	True	AATAAA	-32	NA	35411970	35302565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60590.known	chr20	-	1987	7	FSM	ENSG00000101019.22	ENST00000457259.5	1987	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	84.1462021325581	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	1257	False	NA	-3	True	AATAAA	-32	NA	35411958	35302565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35394091_35394197_35411939
transcript_60592.known	chr20	-	3638	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	22.573337271116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGAATTCTTTTTTA	7	True	NA	1	True	AATAAA	-34	NA	35411974	35344109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_60599.nnic	chr20	+	1388	9	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	12.7769323391806	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	0	True	NA	7	True	AATAAA	-20	NA	35455174	35470132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_35455243_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_606.known	chr1	+	3734	5	FSM	ENSG00000173614.14	ENST00000377205.6	3734	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	5.7662812973354	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTCTGATGGA	14	True	NA	2	True	AATAAA	-14	NA	9943474	9985498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9982300
transcript_60603.known	chr20	+	1235	14	FSM	ENSG00000125991.21	ENST00000416206.5	1235	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	389.13639780246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCCCCCAGCCTCT	34	False	NA	-53	True	NA	NA	NA	35542101	35557546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35549162_35549208_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_60604.known	chr20	+	1357	14	FSM	ENSG00000125991.21	ENST00000357394.8	1357	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	389.310937320235	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	NA	False	NA	35	True	GATAAA	-24	NA	35542037	35557634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35554371_35554387_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_6061.known	chr1	-	349	4	FSM	ENSG00000052723.12	ENST00000510745.5	349	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	119.021006549264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATCAGCAGTGAGTCT	151	False	NA	NA	False	NA	NA	NA	114780512	114774344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780448
transcript_60610.known	chr20	+	1302	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_1	98.3413485433942	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	10	True	NA	35	True	GATAAA	-24	NA	35542077	35557634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_60624.known	chr20	+	601	5	FSM	ENSG00000125991.21	ENST00000411577.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	415.830794915432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGTCAGGAATTTAG	48	False	NA	NA	False	AATAAA	-18	NA	35542115	35543909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35543657
transcript_60625.known	chr20	+	2846	4	FSM	ENSG00000125991.21	ENST00000279052.10	2846	4	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_1	108.81891175506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTAGCCG	14	True	NA	NA	False	ACTAAA	-7	NA	35542081	35545404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821
transcript_60626.known	chr20	+	766	3	FSM	ENSG00000125991.21	ENST00000488384.1	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_2	19	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	3420	False	NA	35	True	GATAAA	-24	NA	35556609	35557634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35557110_35557193_35557250_35557424
transcript_60630.known	chr20	+	453	3	FSM	ENSG00000061656.11	ENST00000430878.1	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	1786	False	NA	33	True	ATTAAA	-27	NA	35619584	35621049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35619747_35620656_35620774_35620875
transcript_60631.known	chr20	-	2147	18	FSM	ENSG00000214078.13	ENST00000352393.8	2147	18	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_15	259.563834312573	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	47	False	NA	-2	True	AATAAA	-30	NA	35664886	35626030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35655201_35655345_35658929_35658983_35664759
transcript_60645.known	chr20	-	1952	16	FSM	ENSG00000214078.13	ENST00000397443.7	1952	16	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_15	125.553813163918	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	4	True	NA	-15	True	AATAAA	-17	NA	35664900	35626043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
transcript_60646.nic	chr20	-	1966	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	339	junction_15	143.279586822408	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	NA	False	NA	-15	True	AATAAA	-17	NA	35664956	35626043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_60647.nic	chr20	-	1874	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_15	209.457224484831	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-8	True	NA	-15	True	AATAAA	-17	NA	35664941	35626043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664878
transcript_60659.known	chr20	-	1695	16	FSM	ENSG00000214078.13	ENST00000397442.5	1695	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	231.755292400315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGACCAGTGAAGACC	58	False	NA	-37	True	NA	NA	NA	35664875	35626065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35626382_35626734_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_6067.known	chr1	-	394	3	FSM	ENSG00000052723.12	ENST00000462123.5	394	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTTTTAGATTGTG	126	False	NA	-4	True	AATAAA	-26	NA	114780537	114779097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114779285_114780109_114780216_114780436
transcript_60678.known	chr20	-	1956	13	FSM	ENSG00000244005.13	ENST00000397425.5	1956	13	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_12	44.1992804114376	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCACCTTCTATTTACT	-1	True	NA	-30	True	NA	NA	NA	35699349	35668982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_6068.known	chr1	-	470	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	7.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	29	True	NA	-13	True	AATAAA	-17	NA	114780634	114779106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114779285_114780109_114780216_114780448
transcript_60680.known	chr20	-	1794	12	FSM	ENSG00000244005.13	ENST00000440385.5	1794	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7968449354161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAAATAAACTCACCT	-7	True	NA	-40	True	NA	NA	NA	35699355	35668992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_60682.known	chr20	-	1755	16	FSM	ENSG00000214078.13	ENST00000437340.5	1755	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	251.773672615352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCTAGGTTCCCTTG	NA	False	NA	-129	True	NA	NA	NA	35664956	35626251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35626382_35626566_35626801_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_60684.known	chr20	+	350	3	FSM	ENSG00000125995.16	ENST00000374072.5	350	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	898.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTGTCCCTCTCTTA	40	False	NA	14	True	AATAAA	-15	NA	35699441	35700978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699457_35699632_35699764_35700774
transcript_60685.known	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1807	junction_1	954.5	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	3	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699457_35699632_35699764_35700797
transcript_60686.known	chr20	+	498	3	FSM	ENSG00000125995.16	ENST00000374078.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_1	1447	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCCTCTCTTAAAGGAA	28	False	NA	20	True	AATAAA	-21	NA	35699271	35700984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699452_35699632_35699764_35700797
transcript_60688.known	chr20	+	288	3	FSM	ENSG00000125995.16	ENST00000397416.1	288	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1848.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCCAACTACATCTGTC	-3	True	NA	-54	True	NA	NA	NA	35699450	35700910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699495_35699632_35699764_35700797
transcript_60689.known	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	225	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	4	True	NA	-8	True	ATTAAA	-17	NA	35664900	35650325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35655345_35658929_35658983_35664759
transcript_6069.known	chr1	-	415	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-22	True	NA	-13	True	AATAAA	-17	NA	114780685	114779106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_114779285_114780448
transcript_60691.known	chr20	-	1068	3	FSM	ENSG00000244462.8	ENST00000424458.5	1068	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	256.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTGAAGCCACTCCC	15	True	NA	NA	False	NA	NA	NA	35664889	35654449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35655345_35658929_35659015_35664801
transcript_60692.known	chr20	-	565	3	FSM	ENSG00000244462.8	ENST00000435161.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACCACTTCTGTTCA	-1	True	NA	NA	False	NA	NA	NA	35664934	35654920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35655345_35658929_35659015_35664878
transcript_60693.known	chr20	-	625	2	FSM	ENSG00000214078.13	ENST00000462352.5	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	1012	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	4172	False	NA	-15	True	AATAAA	-17	NA	35626853	35626043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35626382_35626566
transcript_60694.known	chr20	-	6646	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	63.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	4	True	NA	1	True	AATAAA	-32	NA	35664900	35648924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35655345_35658929_35659015_35664759
transcript_60695.known	chr20	+	496	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	3716	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	-3	True	NA	16	True	AATAAA	-17	NA	35699450	35700980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35699764_35700797
transcript_60702.known	chr20	-	3131	19	FSM	ENSG00000131051.24	ENST00000656873.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_18	450.266162712623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACTGTATTAAGGGG	21	False	35742287	NA	False	ATTAAA	-10	NA	35742266	35703223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940_35742114_35742244
transcript_60706.known	chr20	-	2831	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	260.330919216293	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGATCTTCATTTTTC	NA	False	NA	-7	True	AATAAA	-18	NA	35742312	35703609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_60707.known	chr20	-	2883	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	371.052118630907	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	13	False	NA	-8	True	AATAAA	-17	NA	35742274	35703610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_60708.known	chr20	-	4580	16	FSM	ENSG00000131051.24	ENST00000463004.5	4580	16	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_5	228.999524502175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	4	True	NA	-6	True	AATAAA	-19	NA	35742236	35703608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35740888_35741940
transcript_60709.known	chr20	-	2124	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	383.833675773035	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-8	True	NA	-3	True	AATAAA	-15	NA	35742248	35704325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_60710.known	chr20	-	2149	18	FSM	ENSG00000131051.24	ENST00000429968.5	2149	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	470.721378223844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-16	True	NA	-3	True	AATAAA	-15	NA	35742256	35704325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35734185_35734258_35738967_35739018_35740823_35740888_35741940
transcript_60711.known	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	564.443285213158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	13	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
transcript_60717.known	chr20	+	1814	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	94.5670429898001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	-11	True	NA	NA	False	AAAAAG	-14	NA	35772025	35913335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_6072.known	chr1	-	3216	8	FSM	ENSG00000134198.10	ENST00000369516.7	3216	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	10.259888211986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTGATTTATCTT	-13	True	NA	3	True	ATTAAA	-18	NA	115089503	115048010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_60721.nic	chr20	+	1802	11	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-76	37054	-35	0	5prime_fragment	FALSE	canonical	3	191	junction_10	31.4229215700896	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	2623	False	NA	NA	False	AATAAA	-43	NA	35771938	35913316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_60725.nic	chr20	+	1682	10	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-24	50722	17	123	5prime_fragment	FALSE	canonical	3	210	junction_7	24.9508158158515	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATCTTCATTCTTCA	2675	False	NA	NA	False	NA	NA	NA	35771990	35899648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369
transcript_60728.known	chr20	+	1635	10	FSM	ENSG00000025293.17	ENST00000481202.5	1635	10	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	83.9052964087018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	-11	True	NA	NA	False	AATAAA	-43	NA	35772025	35913316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_60753.nnic	chr20	+	414	3	NNC	ENSG00000025293.17	novel	832	6	NA	NA	-11	21505	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	122.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	2685	False	NA	NA	False	AATAAA	-14	NA	35772000	35823477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_35772080_35801490_35801606_35823257
transcript_60754.known	chr20	+	618	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	-4	True	NA	12	True	AATAAA	-22	NA	35772032	35775058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35774487
transcript_60755.known	chr20	+	5879	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	29.2432821374929	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	-22	True	NA	7	True	AATAAA	-18	NA	35772014	35950370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
transcript_60756.known	chr20	+	662	1	FSM	ENSG00000149646.12	ENST00000614708.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	-1	True	NA	5	True	AATAAA	-17	NA	35954706	35955368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_35954700_35955400
transcript_60758.nic	chr20	+	2514	5	NIC	ENSG00000131043.13	novel	2561	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	122.762728464302	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	6	True	NA	29	True	ATTAAA	-19	NA	36236465	36256933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_36236504_36236881_36236967_36239820_36240626_36244696_36244927_36255577
transcript_60759.known	chr20	+	2561	5	FSM	ENSG00000131043.13	ENST00000680247.1	2561	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	119.321781330988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	18	True	NA	17	True	ATTAAA	-7	NA	36236477	36256921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236504_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_60761.known	chr20	+	3187	5	FSM	ENSG00000131043.13	ENST00000680639.1	3187	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	120.110365914021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	3501	False	NA	17	True	ATTAAA	-7	NA	36236130	36256921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236783_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_60762.known	chr20	+	2417	4	FSM	ENSG00000131043.13	ENST00000320849.9	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	45.2842871939779	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	18	True	NA	29	True	ATTAAA	-19	NA	36236477	36256933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36255577
transcript_60763.known	chr20	+	2863	4	FSM	ENSG00000131043.13	ENST00000680811.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	116.448367194316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACAATCCCCTTGT	24	True	NA	18	True	ATTAAA	-8	NA	36236483	36256922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236967_36239820_36240626_36244696_36244927_36255577
transcript_60764.known	chr20	+	2689	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	115.034294403403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	25	True	NA	29	True	ATTAAA	-19	NA	36236484	36256933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
transcript_60765.known	chr20	+	1412	2	FSM	ENSG00000131043.13	ENST00000681771.1	1412	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTTCCTTTTTTTCTG	18	True	NA	NA	False	TTTAAA	-13	NA	36236477	36241206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36236504_36239820
transcript_60767.nic	chr20	+	1530	8	NIC	ENSG00000080845.19	novel	3110	7	NA	NA	0	25	intron_retention	FALSE	canonical	2	10	junction_1	192.551079891407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCGAACGGAACAGAGTTT	-1	True	NA	25	True	ATTAAA	-15	NA	36461467	36527084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_36461511_36465264_36465368_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_60769.known	chr20	+	3110	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	47.8249121507005	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	6	True	NA	27	True	AATAAA	-19	NA	36461337	36528637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_60770.known	chr20	+	2392	7	FSM	ENSG00000080845.19	ENST00000340491.8	2392	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	155.766295741052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAAAATCACGAAACT	247	False	NA	-4	True	NA	NA	NA	36461746	36527239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36462600_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_60773.known	chr20	+	2786	4	FSM	ENSG00000101335.10	ENST00000279022.7	2786	4	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	43.7442059655397	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGCAGCATATTTAACA	-6	True	NA	15	True	ATTAAA	-25	NA	36541518	36551447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36541562_36544858_36545069_36548031_36548194_36549076
transcript_60774.nnic	chr20	+	1138	4	NNC	ENSG00000101335.10	novel	2786	4	NA	NA	-51	-4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	414.465921397646	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGTCTGTGTGTCTGT	NA	False	NA	25	True	AATAGA	-14	NA	36541445	36549821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_36541562_36544858_36545069_36548126_36548194_36549076
transcript_60777.known	chr20	+	1024	3	FSM	ENSG00000101335.10	ENST00000346786.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	400	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGTGTCTGTGGCT	1	True	NA	29	True	AATAGA	-18	NA	36541496	36549825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36541562_36544858_36545069_36549076
transcript_6078.known	chr1	-	671	7	FSM	ENSG00000134198.10	ENST00000433172.3	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	31.2552217859494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCAATTGTACATT	9970	False	NA	-15	True	NA	NA	NA	115089414	115050382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_115050556_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_60783.known	chr20	+	918	5	FSM	ENSG00000259399.1	ENST00000558530.1	918	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	525.077137190337	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTCTCCATCGGGTG	19	True	NA	8	True	ATTAAA	-8	NA	36574552	36612384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36574636_36578740_36578967_36607714_36607819_36609600_36609731_36612009
transcript_60784.known	chr20	+	1170	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	529.512275589528	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	12	True	NA	36	True	AATAAA	-20	NA	36605788	36612557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
transcript_60788.known	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_2	42.4970587217516	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	2	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
transcript_60792.known	chr20	+	3432	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	198.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	21	False	NA	38	True	AATAAA	-28	NA	36573487	36593950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36573653_36578740_36578967_36590909
transcript_60794.known	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	90	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	-22	True	NA	38	True	AATAAA	-28	NA	36573596	36593950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36573746_36578740_36578967_36590909
transcript_60796.nnic	chr20	+	1672	3	NNC	ENSG00000118707.11	novel	659	3	NA	NA	161	41	intron_retention	FALSE	canonical	3	13	junction_1	197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCGTATGAGCGCATTGG	265	False	NA	23	True	AAAAAG	-21	NA	36573883	36592182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_36574057_36578740_36578967_36590909
transcript_60798.known	chr20	+	3344	3	FSM	ENSG00000118707.11	ENST00000611732.4	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	123.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	20	True	NA	33	True	AATAAA	-23	NA	36574553	36593945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36574636_36578740_36578967_36590909
transcript_6080.known	chr1	-	1061	3	FSM	ENSG00000134259.6	ENST00000369512.3	1061	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-6	True	NA	NA	False	ATTAAA	-13	NA	115338249	115285916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_115286808_115293626_115293751_115338203
transcript_60800.known	chr20	-	2971	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_7	18.7988179297411	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGCTGGTGTTATTT	-3	True	NA	-5	True	AATAAA	-22	NA	36746090	36651770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
transcript_60802.known	chr20	-	2917	15	FSM	ENSG00000101079.21	ENST00000359675.6	2917	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	52.6292384012336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	20	True	NA	0	True	AATAAA	-27	NA	36746067	36651765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36721678_36721784_36746044
transcript_60805.known	chr20	-	2978	17	FSM	ENSG00000101079.21	ENST00000373803.6	2978	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	67.9795178252244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	85	False	NA	0	True	AATAAA	-27	NA	36746053	36651765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36653702_36654800_36654840_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
transcript_60808.known	chr20	-	1922	11	FSM	ENSG00000149636.16	ENST00000373740.7	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	72.0108325184482	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	9935	False	NA	-3	True	ATTAAA	-19	NA	36773720	36751794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770978_36771424_36771474_36773661
transcript_60810.known	chr20	-	2181	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.2376577553945	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	5	True	NA	-3	True	ATTAAA	-19	NA	36773763	36751794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
transcript_60817.known	chr20	-	2441	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	65.371935874655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAGTGTATAAACAA	17	True	NA	1	True	ATTAAA	-23	NA	36773751	36751790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
transcript_6082.known	chr1	+	8671	8	FSM	ENSG00000173218.15	ENST00000355485.7	8671	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	10.0488602257537	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTCTTTTCT	-9	True	NA	14	True	AATAAA	-14	NA	115641969	115698221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_115642087_115651276_115651485_115659640_115659774_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
transcript_60820.known	chr20	-	2129	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	68.8930106293828	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	8	True	NA	-3	True	ATTAAA	-19	NA	36773760	36751794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
transcript_60821.known	chr20	-	2447	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.6409965695527	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-30	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
transcript_60822.known	chr20	-	1915	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	70.0238054759475	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	9837	False	NA	-3	True	ATTAAA	-19	NA	36773818	36751794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
transcript_6083.known	chr1	+	3670	23	FSM	ENSG00000163399.16	ENST00000295598.10	3670	23	0	0	0	0	multi-exon	FALSE	canonical	3	2123	junction_6	227.721670226856	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTGCCCTCGTCGC	2	True	NA	15	True	AATAAA	-20	NA	116373243	116404774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_116373524_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
transcript_60831.known	chr20	-	4649	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	21.0643458637259	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	7	True	NA	-28	True	AATAAA	-15	NA	36951708	36890228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_60832.known	chr20	-	4680	16	FSM	ENSG00000101347.11	ENST00000645033.1	4680	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	43.3479975187884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAAAGCTTCGTGAATA	1	True	NA	-50	True	ATTAAA	-37	NA	36951714	36890250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917097_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_60833.known	chr20	-	1700	13	FSM	ENSG00000101347.11	ENST00000644688.2	1700	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	22.9533040468397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTATTAACCACAAAAA	10	True	NA	NA	False	AATACA	-31	NA	36951705	36904021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_60834.known	chr20	+	2076	7	FSM	ENSG00000101342.10	ENST00000217320.8	2076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATTATTTTTTTTTG	4	True	NA	NA	False	ATTAAA	-17	NA	36876137	36894235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_36876208_36877898_36878055_36879040_36879194_36880654_36880751_36887454_36887529_36889250_36889404_36892861
transcript_60835.known	chr20	+	1394	1	FSM	ENSG00000269846.1	ENST00000598590.1	1394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTCCATTATTTG	21	False	NA	16	True	AATAAA	-16	NA	37095784	37097178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37095800_37097200
transcript_6084.known	chr1	+	1728	3	FSM	ENSG00000163399.16	ENST00000488733.1	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	2312	junction_2	160.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	2	True	NA	NA	False	NA	NA	NA	116373268	116386144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_116373524_116384013_116384125_116384782
transcript_60842.nic	chr20	+	2575	18	NIC	ENSG00000118705.17	novel	2348	17	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	3	148	junction_16	862.802242314286	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	NA	False	NA	13	True	AATAAA	-18	NA	37179029	37241619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37238401_37238450_37241302
transcript_60845.known	chr20	+	2227	17	FSM	ENSG00000118705.17	ENST00000237530.11	2227	17	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_1	265.531535026915	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	-3	True	NA	13	True	AATAAA	-18	NA	37179329	37241619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37241302
transcript_6085.known	chr1	-	4746	2	FSM	ENSG00000203865.12	ENST00000674823.1	4746	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAGATCTTGTTCCTAA	-29	True	NA	NA	False	NA	NA	NA	116418625	116401569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116406149_116418458
transcript_6086.known	chr1	-	301	2	FSM	ENSG00000203865.12	ENST00000676321.1	301	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCAGAAAAATTGGGATA	21	True	NA	NA	False	AATAAA	-24	NA	116418575	116413729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116413914_116418458
transcript_6087.known	chr1	-	1086	6	FSM	ENSG00000116815.16	ENST00000369489.10	1086	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	9.09065454189081	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGTTTGGCTACTGT	-9	True	NA	-1	True	AATAAA	-22	NA	116571026	116514533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116514823_116519230_116519268_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_6088.known	chr1	-	874	6	FSM	ENSG00000116815.16	ENST00000464088.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	29.0544316757358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATTACAATTTTTGAAC	33	True	NA	NA	False	AAAAAG	-19	NA	116570984	116514738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116514823_116519230_116519303_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_60880.known	chr20	+	1539	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	169.977204353996	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	14	True	NA	21	True	AATAAA	-21	NA	37289662	37317260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
transcript_60882.nnic	chr20	+	1501	5	NNC	ENSG00000101363.13	novel	1539	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	162.241139973806	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	1	True	NA	21	True	AATAAA	-21	NA	37289649	37317260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_37289687_37297346_37297535_37298762_37298880_37301207_37301414_37316307
transcript_60884.known	chr20	+	1191	3	FSM	ENSG00000101363.13	ENST00000373606.8	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	152.5	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	6	True	NA	21	True	AATAAA	-21	NA	37289654	37317260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37289687_37301207_37301414_37316307
transcript_60888.known	chr20	+	998	3	FSM	ENSG00000053438.11	ENST00000647955.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGATCTTGCTTTTCCCT	9	True	NA	41	True	ACTAAA	-29	NA	37521240	37523474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37521404_37522357_37522385_37522666
transcript_6089.known	chr1	-	892	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.2192186706253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTTACGTGTGT	-22	True	NA	NA	False	AATAAA	-36	NA	116571039	116521786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
transcript_60890.known	chr20	+	895	3	FSM	ENSG00000053438.11	ENST00000649309.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	189	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCCTCACTGCCTCCC	29	True	NA	-91	True	NA	NA	NA	37521260	37523342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37521404_37522357_37522434_37522666
transcript_60894.known	chr20	-	588	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGATCCCGGCGTTGTG	-4	True	NA	NA	False	NA	NA	NA	37527878	37518939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37519351_37521318_37521410_37527792
transcript_60895.known	chr20	-	581	3	FSM	ENSG00000166619.15	ENST00000414080.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTTTCCTGTACCA	-4	True	NA	NA	False	NA	NA	NA	37527878	37518988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37519351_37521318_37521452_37527792
transcript_60896.known	chr20	+	1222	2	FSM	ENSG00000053438.11	ENST00000346199.3	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	-26	True	NA	54	True	NA	NA	NA	37521205	37523690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37521404_37522666
transcript_60898.known	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-2	True	NA	-8	True	AATAAA	-16	NA	37527876	37517416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37519351_37527792
transcript_609.known	chr1	+	1094	5	FSM	ENSG00000173614.14	ENST00000403197.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	6.01560470775798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGCAGTGGTCTCT	NA	False	NA	4	True	AATAAA	-17	NA	9943427	9981766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9981255
transcript_60903.nic	chr20	+	1990	17	NIC	ENSG00000132792.19	novel	1890	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	179.10165366001	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	-32	True	NA	14	True	ATTAAA	-14	NA	37694036	37872118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_37694153_37694926_37695034_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_60904.known	chr20	+	1958	17	FSM	ENSG00000132792.19	ENST00000628103.2	1958	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183.72193663251	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGGGCCAGTTTTCTT	-7	True	NA	13	True	ATTAAA	-13	NA	37694061	37872117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37694153_37727301_37727403_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_60905.known	chr20	+	1890	16	FSM	ENSG00000132792.19	ENST00000361383.11	1890	16	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_8	51.1090337742099	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	-39	True	NA	14	True	ATTAAA	-14	NA	37694029	37872118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_60914.known	chr20	+	582	4	FSM	ENSG00000132792.19	ENST00000472237.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	39.8246155034798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTTGTAGTTAAGCT	11	False	NA	25	True	ATTAAA	-25	NA	37842253	37872129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_37842420_37859898_37860037_37860271_37860345_37871924
transcript_60916.known	chr20	-	3958	9	FSM	ENSG00000101407.13	ENST00000373448.6	3958	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	171.512208020304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTTTTTTATTTAA	-15	True	NA	0	True	AATAAA	-37	NA	38033461	37983006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38019004_38019145_38033403
transcript_60917.known	chr20	-	3799	8	FSM	ENSG00000101407.13	ENST00000373447.8	3799	8	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	37.4906791137232	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-10	True	NA	-14	True	AATAAA	-23	NA	38033456	37983020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
transcript_60918.nnic	chr20	-	1784	7	NIC	ENSG00000101407.13	novel	3791	7	NA	NA	-324	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_6	147.759658454758	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAAAAGCTCACTTTG	NA	False	NA	-15	True	AATAAA	-22	NA	38033785	37983021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38033403
transcript_60920.nnic	chr20	-	1291	6	NIC	ENSG00000101407.13	novel	3791	7	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_4	194.128823207683	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAAAAGCTCACTTTG	5	True	NA	-15	True	AATAAA	-22	NA	38033441	37983021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38006196_38006398_38033403
transcript_60921.nic	chr20	-	3277	2	ISM	ENSG00000101407.13	ENST00000373447.8	3799	8	-8	27621	-3	1166	5prime_fragment	FALSE	canonical	3	370	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCCAGACGTGGTG	-18	True	NA	NA	False	AATAAA	-7	NA	38033464	38010641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_38013858_38033403
transcript_60922.known	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	7.06517279807555	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	-2	True	NA	14	True	AATAAA	-19	NA	38033745	38092364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
transcript_60925.nnic	chr20	+	685	6	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	23155	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.46969384566991	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	NA	False	NA	5	True	AATAAA	-18	NA	38369636	38377013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_38369681_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_60926.known	chr20	-	1364	9	FSM	ENSG00000196756.14	ENST00000661252.1	1364	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	75.1061748460138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_60927.known	chr20	-	1240	9	FSM	ENSG00000196756.14	ENST00000670958.1	1240	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	74.8012992868439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	NA	False	NA	-17	True	AATAAA	-13	NA	38435409	38420593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_60928.known	chr20	-	1279	8	FSM	ENSG00000196756.14	ENST00000668054.2	1291	8	6	6	0	0	multi-exon	FALSE	canonical	3	14	junction_3	74.5478890050016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-12	True	NA	-17	True	AATAAA	-13	NA	38435356	38420593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60929.known	chr20	-	1122	8	FSM	ENSG00000196756.14	ENST00000666419.1	1122	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	81.0180126104494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAATTGCTCCATGTGC	-39	True	NA	-26	True	AATAAA	-4	NA	38435383	38420602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60930.known	chr20	-	1230	8	FSM	ENSG00000196756.14	ENST00000664636.1	1230	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	74.3444822486264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	10	True	NA	-17	True	AATAAA	-13	NA	38435334	38420593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_60931.known	chr20	-	1077	8	FSM	ENSG00000196756.14	ENST00000656320.1	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	73.5055183267882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTCTTAAATCAGT	-8	True	NA	-13	True	AATAAA	-17	NA	38435352	38420589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_60933.known	chr20	-	1154	7	FSM	ENSG00000196756.14	ENST00000664073.2	1166	7	10	2	0	0	multi-exon	FALSE	canonical	2	4	junction_2	70.7428834269254	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60934.known	chr20	-	960	7	FSM	ENSG00000196756.14	ENST00000436764.7	1010	7	49	1	0	0	multi-exon	FALSE	canonical	2	4	junction_2	75.7944955491859	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	16	True	NA	-15	True	AATAAA	-15	NA	38435328	38420591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60936.nic	chr20	-	1151	7	FSM	ENSG00000196756.14	ENST00000689917.1	1153	7	0	2	0	0	multi-exon	FALSE	canonical	2	5	junction_2	75.1452297591508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-37	True	NA	-15	True	AATAAA	-15	NA	38435381	38420591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60937.known	chr20	-	923	7	FSM	ENSG00000196756.14	ENST00000417578.7	934	7	9	2	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	81.9845852720023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	25	True	NA	-15	True	AATAAA	-15	NA	38435319	38420591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60939.known	chr20	-	2261	7	FSM	ENSG00000196756.14	ENST00000668042.1	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	73.0996276020306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	0	True	NA	-11	True	AATAAA	-19	NA	38435344	38420587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_6094.known	chr1	+	9439	23	FSM	ENSG00000116830.12	ENST00000369466.9	9439	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_9	27.2816652020793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAAATCAGATTCATTA	-5	True	NA	43	True	AATAAA	-22	NA	117060325	117107453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379
transcript_60940.known	chr20	-	1044	6	FSM	ENSG00000196756.14	ENST00000665181.1	1044	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	77.2735401026768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-12	True	NA	-15	True	AATAAA	-15	NA	38435356	38420591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38435026
transcript_60942.known	chr20	-	1037	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	4	2	0	0	multi-exon	FALSE	canonical	3	89	junction_2	39.8376706146331	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_60943.known	chr20	-	868	6	FSM	ENSG00000196756.14	ENST00000654183.2	874	6	6	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	58.8747823775171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-33	True	NA	-10	True	AATAAA	-20	NA	38435377	38420586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_60947.known	chr20	-	893	5	FSM	ENSG00000196756.14	ENST00000655520.2	897	5	4	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	72.242646684628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-12	True	NA	-11	True	AATAAA	-19	NA	38435356	38420587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38435026
transcript_60948.known	chr20	+	1299	6	FSM	ENSG00000174365.21	ENST00000666350.1	1299	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	27.1071946169278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-10	True	NA	32	True	AATAAA	-14	NA	38446679	38450921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_60949.known	chr20	+	1234	6	FSM	ENSG00000174365.21	ENST00000432153.6	1234	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	30.9748284902435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	-18	True	NA	33	True	AATAAA	-15	NA	38446671	38450922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_60950.known	chr20	+	1229	6	FSM	ENSG00000174365.21	ENST00000656824.1	1229	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	27.3890489064516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTTCTTTCATTT	-2	True	NA	34	True	AATAAA	-16	NA	38446687	38450923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38446949_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_60952.known	chr20	+	1116	5	FSM	ENSG00000174365.21	ENST00000434729.7	1143	5	27	0	2	0	multi-exon	FALSE	canonical	2	3	junction_2	27.976552682559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	5	True	NA	32	True	AATAAA	-14	NA	38446694	38450921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261_38450448_38450532
transcript_60953.known	chr20	+	1046	5	FSM	ENSG00000174365.21	ENST00000421599.6	1093	5	42	5	-2	0	multi-exon	FALSE	canonical	2	3	junction_2	29.8862426544388	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	1	True	NA	32	True	AATAAA	-14	NA	38446690	38450921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450335_38450448_38450532
transcript_60954.known	chr20	+	1068	5	FSM	ENSG00000174365.21	ENST00000667760.2	1076	5	7	1	2	0	multi-exon	FALSE	canonical	3	13	junction_1	27.4988636128841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	-8	True	NA	31	True	AATAAA	-13	NA	38446681	38450920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_60955.known	chr20	+	967	5	FSM	ENSG00000174365.21	ENST00000359074.9	967	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.9071189210512	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	11	True	NA	31	True	AATAAA	-13	NA	38446700	38450920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38446941_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_60961.known	chr20	+	880	4	FSM	ENSG00000174365.21	ENST00000457218.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	6.97614984548545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	580	False	NA	32	True	AATAAA	-14	NA	38447313	38450921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447624_38448661_38448731_38450335_38450448_38450532
transcript_60962.known	chr20	+	1152	4	FSM	ENSG00000174365.21	ENST00000670898.2	1154	4	2	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	14.2672897060218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-16	True	NA	32	True	AATAAA	-14	NA	38446673	38450921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450335
transcript_60963.nic	chr20	+	1704	3	ISM	ENSG00000174365.21	ENST00000693500.1	1600	4	-19	0	0	0	intron_retention	FALSE	canonical	3	19	junction_2	21	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	NA	False	NA	32	True	AATAAA	-14	NA	38446648	38450921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_38447624_38448661_38448731_38450261
transcript_60964.known	chr20	+	1581	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	25	1	0	0	multi-exon	FALSE	canonical	3	61	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	7	True	NA	31	True	AATAAA	-13	NA	38446696	38450920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38447624_38448661_38448731_38450335
transcript_60965.known	chr20	+	1172	6	FSM	ENSG00000174365.21	ENST00000666020.1	1172	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8425027803687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-2	True	NA	32	True	AATAAA	-14	NA	38446687	38450921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38446968_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_60968.known	chr20	+	8652	30	FSM	ENSG00000170471.15	ENST00000397042.7	8652	30	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	24.6303950734542	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTGTGTGCTTTTGG	-29	True	NA	21	True	ATTAAA	-24	NA	38472815	38578859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535085_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565355_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
transcript_60970.nnic	chr20	+	2022	9	NNC	ENSG00000101442.10	novel	2547	9	NA	NA	-278	-329	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	51.2341438886218	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCCGTGTAGATACTT	NA	False	NA	15	True	TTTAAA	-20	NA	38748181	38772191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_38748377_38750006_38750240_38752130_38752301_38754956_38755175_38755856_38756040_38765401_38765519_38766237_38766378_38767463_38767597_38771558
transcript_60971.nic	chr20	+	1765	3	ISM	ENSG00000101447.15	ENST00000619850.2	2370	4	15583	55	15583	-55	3prime_fragment	FALSE	canonical	3	427	junction_2	35.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGAATATCTGTGTTC	NA	False	NA	17	True	AATAAA	-18	NA	38941999	38953051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_38942127_38947875_38948001_38951538
transcript_60972.known	chr20	-	187	1	FSM	ENSG00000261431.1	ENST00000570096.1	187	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAACTTGTCGACTTCTG	NA	False	NA	-4	True	ATTAAA	-26	NA	38962111	38961924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_38961900_38962100
transcript_60974.known	chr20	+	3318	22	FSM	ENSG00000101452.15	ENST00000484417.5	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	22.7375841378609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	5	True	NA	24	True	AGTAAA	-34	NA	38962359	39039721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_60975.known	chr20	+	3314	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	13.8882811658425	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	-11	True	NA	24	True	AGTAAA	-34	NA	38962343	39039721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_60976.nic	chr20	+	3247	21	NIC	ENSG00000101452.15	novel	3314	22	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	24.6971152161543	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	NA	False	NA	24	True	AGTAAA	-34	NA	38962332	39039721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_60977.known	chr20	+	2347	21	FSM	ENSG00000101452.15	ENST00000373323.8	2347	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	24.6649548955598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGCTCTATGGGAAACA	-11	True	NA	NA	False	NA	NA	NA	38962343	39038847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_38962408_38969080_38969215_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_60979.nic	chr20	+	1853	2	ISM	ENSG00000101452.15	ENST00000373323.8	2347	21	-11	67989	-11	-67778	5prime_fragment	FALSE	canonical	3	89	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACAAGAAGTTAAGAAAT	NA	False	NA	NA	False	CATAAA	-27	NA	38962332	38970858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_38962408_38969080
transcript_6098.nic	chr1	+	1894	10	ISM	ENSG00000116830.12	ENST00000369466.9	9439	23	-17	25553	-17	5511	5prime_fragment	FALSE	canonical	3	194	junction_9	32.9443976016156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAGGAGAAAAGCA	NA	False	NA	20	True	NA	NA	NA	117060308	117081900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827
transcript_60983.nnic	chr20	-	572	5	Antisense	novelGene_ENSG00000229976.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	5.80409338312195	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTTCTGTTTATTTCT	NA	False	NA	-1	True	TATAAA	-15	NA	39789033	39782911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr20_-_39783137_39785718_39785842_39787278_39787391_39788204_39788278_39788994
transcript_60992.nic	chr20	-	720	4	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-72	112837	-65	0	5prime_fragment	FALSE	canonical	3	41	junction_3	10.0332779621949	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	99	False	NA	NA	False	NA	NA	NA	41618449	41514919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_41514953_41533049_41533571_41551304_41551361_41618339
transcript_60994.known	chr20	-	599	3	FSM	ENSG00000124177.16	ENST00000482596.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	27.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	15	True	NA	NA	False	NA	NA	NA	41618384	41514919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_41514953_41533049_41533571_41618339
transcript_60995.known	chr20	-	1349	6	FSM	ENSG00000124177.16	ENST00000470470.1	1349	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	6.21610810716802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTGTGTCTGTTTTCT	NA	False	NA	NA	False	AATAAA	-29	NA	41533285	41496808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049
transcript_60996.known	chr20	+	1680	7	FSM	ENSG00000124193.16	ENST00000483871.6	1680	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	100.495439365841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTTTTTTTTTTTT	31	False	NA	NA	False	NA	NA	NA	43457927	43461334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43458141_43458360_43458510_43459152_43459421_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_60998.known	chr20	+	1227	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	84.1455419034319	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	-4	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
transcript_60999.known	chr20	+	4353	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	18.8785592670627	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	-1	True	NA	104	True	AATAAA	-18	NA	43457895	43464243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_610.known	chr1	-	1405	7	FSM	ENSG00000162441.12	ENST00000400903.6	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	14.46163506969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACCATCCCCCAGCCT	592	False	NA	NA	False	AATAAA	-17	NA	9942768	9929719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623
transcript_61005.known	chr20	-	588	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTCCACAATTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	43590596	43590008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_43590000_43590600
transcript_6101.known	chr1	+	849	5	FSM	ENSG00000116830.12	ENST00000470935.1	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	115.4585964751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGAGGCTAAAGAAACAA	3	True	NA	NA	False	NA	NA	NA	117060361	117075444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117060375_117060454_117060562_117062386_117062474_117073660_117073728_117074869
transcript_61010.known	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	61.9731761023511	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	28	True	NA	37	True	ATTAAA	-32	NA	43590989	43647222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_61013.known	chr20	+	1754	14	FSM	ENSG00000101052.13	ENST00000373030.8	1754	14	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	39.0176716146011	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTGTAAATACTGTAC	-25	True	NA	114	True	NA	NA	NA	43590936	43647299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_61023.nnic	chr20	+	1617	13	NIC	ENSG00000101052.13	novel	1754	14	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	100.694946358902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	-37	True	NA	37	True	ATTAAA	-32	NA	43590924	43647222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_61026.known	chr20	+	2668	14	FSM	ENSG00000101057.16	ENST00000217026.5	2668	14	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_2	129.143422862487	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGTCTGGACTCTGC	-2	True	NA	17	True	AATAAA	-15	NA	43667113	43716482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_43667304_43673805_43673900_43681783_43681856_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
transcript_61028.known	chr20	-	2109	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	20.4178571081514	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTGGCTGTGGTTGAT	16	True	NA	NA	False	AATACA	-20	NA	44210771	44195938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
transcript_6103.nic	chr1	-	1951	8	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	47.9012589839234	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-24	True	NA	-19	True	AATAAA	-22	NA	117121750	117111059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_117111213_117112094_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_61036.known	chr20	+	1904	4	FSM	ENSG00000223891.7	ENST00000435163.5	1904	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTCCATCTCAAAAAAA	10	False	NA	-38	True	NA	NA	NA	44211036	44225972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44211357_44214887_44215004_44217366_44217683_44224820
transcript_61037.known	chr20	+	1366	2	FSM	ENSG00000223891.7	ENST00000671199.2	1378	2	0	12	0	-3	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTATGATTTTGTTT	NA	False	NA	5	True	AATAAA	-20	NA	44210906	44226015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44211078_44224820
transcript_61038.known	chr20	+	1482	2	FSM	ENSG00000223891.7	ENST00000442383.1	1482	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	55	False	NA	17	True	AATAAA	-32	NA	44211081	44226027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44211357_44224820
transcript_61039.known	chr20	+	2855	6	FSM	ENSG00000124194.17	ENST00000537864.5	2855	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.1637648062658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTTGCAATAAAAAAAA	-10	True	NA	NA	False	ATTAAA	-40	NA	44247257	44280917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44247515_44257152_44257346_44258376_44258608_44263229_44263328_44264444_44264560_44278956
transcript_61041.known	chr20	+	2778	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	10.36532681588	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATCTTTTTTCATC	-3	True	NA	NA	False	AATAAA	-16	NA	44247307	44280947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_61042.known	chr20	+	880	5	FSM	ENSG00000124194.17	ENST00000438466.5	880	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	24.3618554301597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGCTCCCTGGGTGGG	9	True	NA	-78	True	NA	NA	NA	44247319	44279235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44247515_44257152_44257346_44263229_44263328_44264444_44264560_44278956
transcript_61043.known	chr20	-	4628	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCATTTTGTGTGT	-22	True	NA	NA	False	ATTAAA	-25	NA	44311202	44302839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44307241_44310975
transcript_61044.known	chr20	+	1192	8	FSM	ENSG00000101076.19	ENST00000609795.5	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	5.92469752952221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGCCTCAGTTTC	93	False	NA	NA	False	NA	NA	NA	44355800	44424379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44355854_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017
transcript_61045.known	chr20	+	1603	8	FSM	ENSG00000101076.19	ENST00000443598.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	11.7108008753824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGTTTAACTGAAAAGGA	12	False	NA	3	True	AATAAA	-13	NA	44401283	44424639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44401488_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017
transcript_61047.known	chr20	-	1726	11	FSM	ENSG00000132824.14	ENST00000255175.5	1726	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	150.072282584093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCTGTAAGGTGGTGA	-50	True	NA	-7	True	ATTAAA	-13	NA	44522085	44496223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44496356_44500257_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_61050.known	chr20	-	4396	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_7	33.6708834909589	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACTGATATTAATTTG	-35	True	NA	-11	True	AATAAA	-41	NA	44522070	44497440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_61059.known	chr20	-	1496	12	FSM	ENSG00000196839.13	ENST00000372874.9	1496	12	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_6	23.6174749701771	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGGCATGTAATTTGG	-4	True	NA	-12	True	AATAAA	-25	NA	44651699	44619521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_61063.known	chr20	-	1128	11	FSM	ENSG00000196839.13	ENST00000537820.1	1128	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	59.2347870765144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	4	True	NA	NA	False	NA	NA	NA	44651691	44619809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_61064.known	chr20	-	1276	11	FSM	ENSG00000196839.13	ENST00000492931.5	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	22.7103500633522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	4	True	NA	NA	False	NA	NA	NA	44651691	44619809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_61067.known	chr20	+	1338	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	260.578682934733	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	11	False	NA	23	True	AATAAA	-19	NA	44531784	44619037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
transcript_61068.known	chr20	+	1191	4	FSM	ENSG00000168734.14	ENST00000372894.7	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	105.849998687871	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	11	False	NA	23	True	AATAAA	-19	NA	44531784	44619037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44531979_44589796_44589867_44614533_44614708_44618284
transcript_6107.nic	chr1	-	1708	7	NIC	ENSG00000134253.10	novel	2415	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	42.3425186885344	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTTCAAGTGCTCTTT	-24	True	NA	-9	True	ATTAAA	-22	NA	117121750	117112184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_61073.known	chr20	+	1097	7	FSM	ENSG00000166913.13	ENST00000479421.5	1097	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1173.11011134221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAATCGTACGT	-30	True	NA	36	True	GATAAA	-14	NA	44885701	44906520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44885887_44901530_44901834_44903035_44903122_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_61074.known	chr20	+	3109	7	FSM	ENSG00000166913.13	ENST00000372839.7	3109	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	1085.86392896266	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	-21	True	NA	25	True	AATAAA	-27	NA	44885710	44908532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44885887_44887647_44887743_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_61076.known	chr20	+	3020	6	FSM	ENSG00000166913.13	ENST00000353703.9	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	2143	junction_1	217.304762948261	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	-27	True	NA	25	True	AATAAA	-27	NA	44885704	44908532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44885887_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_61082.known	chr20	+	2141	15	FSM	ENSG00000101104.13	ENST00000217073.7	2141	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	24.4536212417861	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	-17	True	NA	24	True	ATTAAA	-17	NA	44910059	44939316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933056_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_6109.known	chr1	-	3536	6	FSM	ENSG00000134253.10	ENST00000256649.9	3536	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	17.5202739704606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-23	True	NA	-19	True	AATAAA	-22	NA	117121749	117111059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_61093.known	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	19.8007829622255	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	2	True	NA	21	True	ATTAAA	-14	NA	44910123	44939313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_61097.known	chr20	-	1973	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_3	30.8999280833395	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	4	True	NA	-4	True	AATAAA	-24	NA	44960397	44942129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_61099.nnic	chr20	-	1798	6	NIC	ENSG00000025772.8	novel	1973	7	NA	NA	-60	-87	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	152.624244469874	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTGCTTTCATTT	7164	False	NA	-2	True	ATTAAA	-20	NA	44960457	44942216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_44943214_44943452_44943580_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_611.known	chr1	+	625	4	FSM	ENSG00000162444.12	ENST00000294435.8	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	2.35702260395516	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTTTTTCCTTTCCG	-2	True	NA	13	True	AATAAA	-15	NA	9997227	10016021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_9997332_10007569_10007749_10008172_10008275_10015781
transcript_61102.known	chr20	+	6366	11	FSM	ENSG00000101109.12	ENST00000372806.8	6366	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	15.6604597633658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTGTGTTTATTCT	-17	True	NA	58	True	AATATA	-43	NA	44966511	45080021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_61103.nic	chr20	+	1316	10	ISM	ENSG00000101109.12	ENST00000372801.5	2038	12	-63	50577	-20	29774	5prime_fragment	FALSE	canonical	3	122	junction_8	16.3940669785982	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAAAACCAGATCAA	7041	False	NA	NA	False	NA	NA	NA	44966458	45025031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972
transcript_61106.known	chr20	+	932	2	FSM	ENSG00000101109.12	ENST00000488618.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCCTACCTCTCTCTG	-14	True	NA	NA	False	AATAAA	-13	NA	44966514	44972920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_44966604_44972077
transcript_61107.known	chr20	+	1622	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGACTCCTGTTT	-3	True	NA	15	True	AATAAA	-20	NA	45207032	45209768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45207130_45207373_45208731_45209600
transcript_61112.known	chr20	-	2613	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	4.30116263352131	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	0	True	NA	-5	True	AATAAA	-18	NA	45348424	45325287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
transcript_61114.nnic	chr20	-	2474	4	NIC	ENSG00000124145.6	novel	2613	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	82.3825763671475	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	0	True	NA	-5	True	AATAAA	-18	NA	45348424	45325287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_45327416_45330365_45330565_45333022_45333070_45348324
transcript_61117.known	chr20	+	1313	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	195.944277793458	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	36	True	NA	17	True	AATAAA	-22	NA	45363199	45410610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
transcript_61118.known	chr20	-	2312	5	FSM	ENSG00000124251.11	ENST00000372726.5	2312	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	0.866025403784439	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCGTGAACTTCTGTC	-8	True	NA	-1	True	NA	NA	NA	45378325	45372556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45374012_45375038_45375553_45377211_45377343_45377538_45377614_45378188
transcript_61119.known	chr20	+	2728	4	FSM	ENSG00000204070.10	ENST00000243918.10	2728	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	18.624953392932	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCAGCAGTGTGGG	-8	True	NA	25	True	AATAAA	-22	NA	45363155	45369209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45366874
transcript_61123.nnic	chr20	+	1141	4	NNC	ENSG00000244274.9	novel	1118	4	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	214.104854893318	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	NA	False	NA	14	True	AATAAA	-19	NA	45405955	45410607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45406136_45408459_45408607_45408800_45408939_45409931
transcript_61125.nnic	chr20	+	1017	4	NNC	ENSG00000244274.9	novel	1132	3	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	215.041081346488	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	NA	False	NA	14	True	AATAAA	-19	NA	45405965	45410607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45406022_45408459_45408607_45408800_45408939_45409931
transcript_61126.known	chr20	+	1118	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	190.720272184742	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	8	True	NA	17	True	AATAAA	-22	NA	45406056	45410610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
transcript_61127.known	chr20	+	1202	4	FSM	ENSG00000244274.9	ENST00000372722.7	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	217.219295234614	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	22	False	NA	17	True	AATAAA	-22	NA	45406070	45410610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406211_45408459_45408607_45408800_45409037_45409931
transcript_61128.known	chr20	+	1036	4	FSM	ENSG00000244274.9	ENST00000357275.6	1036	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	220.659617208647	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	8	True	NA	17	True	AATAAA	-22	NA	45406183	45410610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406256_45408459_45408607_45408800_45408939_45409931
transcript_61130.known	chr20	+	1078	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	68.9266921365656	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	14	True	NA	17	True	AATAAA	-22	NA	45406618	45410610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
transcript_61131.known	chr20	+	1207	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	201.1737778362	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	-17	True	NA	17	True	AATAAA	-22	NA	45406587	45410610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
transcript_61134.known	chr20	+	1537	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	215.041081346488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	230	False	NA	17	True	AATAAA	-22	NA	45407206	45410610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
transcript_61135.known	chr20	+	2915	4	FSM	ENSG00000204070.10	ENST00000426004.5	2915	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	56.1802654160891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCCTCAGCAAGATTAA	-25	True	NA	NA	False	AATAAA	-25	NA	45363138	45376798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45374293
transcript_61137.known	chr20	+	2203	12	FSM	ENSG00000124155.19	ENST00000640585.1	2203	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	198.332636524461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGAGTTTACTGTTTG	-2	True	NA	-18	True	NA	NA	NA	45416140	45426196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_61138.known	chr20	+	2158	12	FSM	ENSG00000124155.19	ENST00000639932.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	197.051111379428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTACTGTTTGTGGA	-2	True	NA	-14	True	NA	NA	NA	45416140	45426200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_61139.known	chr20	+	2187	12	FSM	ENSG00000124155.19	ENST00000640986.1	2187	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	199.163457101518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTTGCCTCTTGTCCT	-2	True	NA	26	True	AATAAA	-16	NA	45416140	45426240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_6114.known	chr1	+	424	3	FSM	ENSG00000235202.2	ENST00000664471.1	424	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGGGTCTTTGGGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	117272181	117321330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117272285_117296519_117296634_117321123
transcript_61140.known	chr20	+	2112	12	FSM	ENSG00000124155.19	ENST00000640272.1	2112	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	187.941040517349	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	-2	True	NA	-25	True	NA	NA	NA	45416140	45426189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_61141.known	chr20	+	2021	11	FSM	ENSG00000124155.19	ENST00000639499.1	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	27.2257231308922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCTCTCTTTCTTTCCT	-2	True	NA	NA	False	NA	NA	NA	45416140	45425100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495
transcript_61142.known	chr20	+	1971	11	FSM	ENSG00000124155.19	ENST00000372689.9	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	204.175145402177	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	-6	True	NA	27	True	AATAAA	-17	NA	45416136	45426241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
transcript_61143.known	chr20	+	2032	11	FSM	ENSG00000124155.19	ENST00000638246.1	2032	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	205.131275041131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	5567	False	NA	-25	True	NA	NA	NA	45416096	45426189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_61144.known	chr20	+	1944	11	FSM	ENSG00000124155.19	ENST00000638671.1	1944	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	207.080395016042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGAGTTTACTGTTT	-2	True	NA	-19	True	NA	NA	NA	45416140	45426195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_61145.known	chr20	+	1880	10	FSM	ENSG00000124155.19	ENST00000279035.14	1880	10	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	209.270750258081	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	5554	False	NA	-12	True	NA	NA	NA	45416083	45426202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_61147.known	chr20	+	1158	7	FSM	ENSG00000124155.19	ENST00000545755.3	1158	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	255.576907320586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCCCTTTCCAGCAGC	11	False	NA	NA	False	NA	NA	NA	45416153	45425826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45416344_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_6115.known	chr1	+	8576	13	FSM	ENSG00000198162.12	ENST00000356554.7	8576	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	6.88547182277455	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTTTAGCCTTCATT	-19	True	NA	14	True	AATAAA	-20	NA	117367448	117528872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117368486_117402185_117402442_117405548_117405646_117414712_117414832_117420568_117420650_117442230_117442326_117460488_117460613_117466333_117466428_117493146_117493263_117496762_117496983_117499381_117499555_117502854_117502971_117522824
transcript_61156.known	chr20	+	692	5	FSM	ENSG00000101443.18	ENST00000447118.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	349.388304755611	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTCTGTCTCTGTCTCCC	2	True	NA	23	True	AATAAA	-16	NA	45469755	45481531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45469861_45470388_45470533_45471152_45471282_45479941_45480095_45481370
transcript_61162.known	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	695	junction_1	63.7303346574891	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	-1	True	NA	24	True	AATAAA	-17	NA	45469752	45481532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
transcript_61168.known	chr20	+	420	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	377	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	2	True	NA	24	True	AATAAA	-17	NA	45469755	45481532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45469861_45479941_45480095_45481370
transcript_61169.known	chr20	+	460	3	FSM	ENSG00000101443.18	ENST00000462062.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	361	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	3	False	NA	24	True	AATAAA	-17	NA	45471272	45481532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45471418_45479941_45480095_45481370
transcript_6117.known	chr1	+	5654	2	FSM	ENSG00000183508.5	ENST00000369448.4	5654	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTTTCTTCTCAAT	-2	True	NA	NA	False	AATAAA	-42	NA	117606047	117628389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117606154_117622841
transcript_61173.known	chr20	-	468	3	FSM	ENSG00000124116.19	ENST00000471401.5	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGTTTGTGCTATTTG	-2	True	NA	NA	False	GATAAA	-13	NA	45791881	45774212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45774445_45775416_45775603_45791831
transcript_61174.known	chr20	+	1264	13	FSM	ENSG00000101457.13	ENST00000372622.8	1264	13	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	29.6857382518198	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGAACCTGCTGTGCC	-1	True	NA	13	True	ATTAAA	-19	NA	45791953	45811418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_61176.known	chr20	+	1073	12	FSM	ENSG00000101457.13	ENST00000456939.5	1073	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	110.873690326477	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCCCTCTACCTT	56	False	NA	22	True	ATTAAA	-28	NA	45792054	45811427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_61178.known	chr20	+	737	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	1352.1620317107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	-10	True	NA	33	True	AATAAA	-26	NA	45812634	45816957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
transcript_61181.known	chr20	+	777	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	2645	junction_1	113.26005474129	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	-1	True	NA	28	True	AATAAA	-21	NA	45812643	45816952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_61182.known	chr20	+	914	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1138.47459348024	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	1	True	NA	33	True	AATAAA	-26	NA	45813005	45816957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_61184.known	chr20	+	641	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1208.04291624925	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	NA	False	NA	29	True	AATAAA	-22	NA	45812575	45816953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
transcript_61185.known	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1179.19527644916	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	1	True	NA	33	True	AATAAA	-26	NA	45812673	45816957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
transcript_61188.known	chr20	+	476	4	FSM	ENSG00000175063.17	ENST00000243893.10	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1323.29017561867	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	13	False	NA	33	True	AATAAA	-26	NA	45812657	45816957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45812797_45813436_45813465_45815853_45815914_45816708
transcript_6119.nic	chr1	-	2291	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	0	105	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	22.0500358646568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTACCTGAGTCCAAGA	-5	True	NA	58	True	TATAAA	-23	NA	117929621	117870078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_61190.known	chr20	-	681	6	FSM	ENSG00000101470.10	ENST00000372555.8	681	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	83.7233539700841	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-3	True	NA	3	True	AATAAA	-17	NA	45827312	45823213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45827245
transcript_61191.nic	chr20	-	512	2	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	2976	0	2976	0	intron_retention	FALSE	canonical	3	249	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-4	True	NA	3	True	AATAAA	-17	NA	45824336	45823213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_45823380_45823990
transcript_61195.known	chr20	-	1154	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	15.9549365401433	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGGCTTTTAATTCCC	-7	True	NA	-13	True	AATAAA	-19	NA	45857392	45841720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_61197.known	chr20	-	1197	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	118.666928838662	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGGCTGGCTTTTAA	-4	True	NA	-18	True	AATAAA	-14	NA	45857389	45841725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_61199.known	chr20	-	1013	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	127.942369838924	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGATACCACTGGAGTG	-17	True	NA	-30	True	AATAAA	-2	NA	45857402	45841737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
transcript_612.known	chr1	+	4772	27	FSM	ENSG00000130939.20	ENST00000253251.12	4772	27	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_13	35.0977502271288	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCCTCTCCCCCT	NA	False	NA	-45	True	NA	NA	NA	10032831	10180367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
transcript_61204.known	chr20	-	1268	4	FSM	ENSG00000101473.17	ENST00000484783.1	1268	4	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	19.4821855949366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGAGGGCGACATGAAGAT	-12	True	NA	NA	False	NA	NA	NA	45857397	45843722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45844421_45848449_45848676_45855158_45855293_45857187
transcript_61206.known	chr20	-	814	3	FSM	ENSG00000101473.17	ENST00000426915.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGTTGTGTGCATTAT	76	False	NA	-3	True	ATTAAA	-16	NA	45857309	45853421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45853980_45855158_45855293_45857187
transcript_61210.known	chr20	+	2776	2	FSM	ENSG00000132801.7	ENST00000255152.3	2776	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAAATGTGTTCTGCT	-4	True	NA	NA	False	AATAAA	-7	NA	45857613	45879122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45857981_45876713
transcript_61212.nnic	chr20	+	1061	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	0	True	NA	29	True	AATAAA	-21	NA	45881207	45885266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881262_45882532_45883248_45884974
transcript_61213.nnic	chr20	+	1064	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-19	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	12.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	0	True	NA	29	True	AATAAA	-21	NA	45881207	45885266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881262_45882532_45883263_45884986
transcript_61215.nnic	chr20	+	2203	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	0	True	NA	29	True	AATAAA	-21	NA	45881207	45885266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881262_45882532_45884393_45884977
transcript_61216.nnic	chr20	+	2202	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	0	True	NA	29	True	AATAAA	-21	NA	45881207	45885266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881262_45882532_45884399_45884984
transcript_61218.nnic	chr20	+	2341	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	-3	True	NA	29	True	AATAAA	-21	NA	45881226	45885266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_45881419_45882532_45884393_45884977
transcript_61219.known	chr20	+	2769	2	FSM	ENSG00000168612.5	ENST00000372523.1	2769	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	-3	True	NA	29	True	AATAAA	-21	NA	45881226	45885266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45881262_45882532
transcript_6122.nic	chr1	-	2188	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	22.0500358646568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATACAGAACCAATGT	-7	True	NA	-47	True	NA	NA	NA	117929623	117870183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_61225.known	chr20	-	1889	16	FSM	ENSG00000100979.15	ENST00000372431.8	1889	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_9	25.7138095194003	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTATGGGAGACCCT	0	True	NA	-13	True	AATAAA	-18	NA	45912155	45898621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_61230.known	chr20	+	1858	15	FSM	ENSG00000064601.21	ENST00000646241.3	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_11	37.6124165343178	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	6	True	NA	11	True	ATTAAA	-18	NA	45891334	45898820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_61231.known	chr20	+	1898	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	84.9571320473701	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	12	True	NA	11	True	ATTAAA	-18	NA	45891340	45898820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_61236.known	chr20	-	1731	15	FSM	ENSG00000100979.15	ENST00000354050.8	1731	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	118.917052209187	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTATGGGAGACCCTG	3	True	NA	-12	True	AATAAA	-19	NA	45912152	45898620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_6124.known	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	12.4933118201975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-5	True	NA	-8	True	AGTAAA	-16	NA	117929621	117863484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_61244.known	chr20	+	2557	14	FSM	ENSG00000064601.21	ENST00000684198.1	2557	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_11	38.5084329502516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	692	False	NA	NA	False	NA	NA	NA	45890962	45898949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45898110_45898366
transcript_61247.known	chr20	+	2433	14	FSM	ENSG00000064601.21	ENST00000606066.3	2433	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	38.6923841565233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	692	False	NA	NA	False	NA	NA	NA	45890962	45898949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_61248.known	chr20	+	1820	14	FSM	ENSG00000064601.21	ENST00000354880.9	1820	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	88.0057152528162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	-7	True	NA	11	True	ATTAAA	-18	NA	45891321	45898820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_61250.known	chr20	-	1530	14	FSM	ENSG00000100979.15	ENST00000372420.5	1530	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	123.395213433199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGGCTGTCCTGAG	1218	False	NA	-18	True	NA	NA	NA	45910937	45898759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45910870
transcript_61251.known	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	124.453028139205	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	0	True	NA	-64	True	NA	NA	NA	45912155	45898805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
transcript_61259.known	chr20	-	1199	2	FSM	ENSG00000124257.7	ENST00000372518.5	1199	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGAAGGTCTCCTTGC	2	True	NA	-24	True	AATAAA	-22	NA	45891208	45888633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_45888874_45890249
transcript_61260.known	chr20	+	2689	17	FSM	ENSG00000100982.12	ENST00000372409.8	2689	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	47.6299210056032	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	-11	True	NA	22	True	AATACA	-14	NA	45934682	45948020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_61266.known	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	39	False	NA	5	True	GATAAA	-21	NA	45934732	45937972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_45934805_45937417
transcript_61268.nic	chr20	+	1511	7	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	3038	0	3038	0	3prime_fragment	FALSE	canonical	3	7	junction_3	9.08753725347706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	19	False	NA	21	True	AATAAA	-21	NA	46011945	46016561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_61269.nic	chr20	+	730	4	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	4726	0	4726	0	3prime_fragment	FALSE	canonical	3	13	junction_1	8.05536398239638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	312	False	NA	21	True	AATAAA	-21	NA	46013633	46016561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_46013797_46014123_46014275_46014370_46014475_46016249
transcript_61270.nic	chr20	+	731	3	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	5052	0	5052	0	3prime_fragment	FALSE	canonical	3	29	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	247	False	NA	21	True	AATAAA	-21	NA	46013959	46016561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_46014275_46014370_46014475_46016249
transcript_61271.known	chr20	+	401	2	FSM	ENSG00000124140.15	ENST00000628272.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	9	True	NA	5	True	AATAAA	-15	NA	46021698	46023581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46021887_46023368
transcript_61272.known	chr20	+	2336	13	FSM	ENSG00000100985.7	ENST00000372330.3	2336	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	8.25126252965771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	6	True	NA	21	True	AATAAA	-21	NA	46008907	46016561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46009065_46009865_46010099_46010482_46010632_46010921_46011051_46011142_46011317_46011573_46011748_46012136_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_61274.known	chr20	-	3224	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	28.5442728091658	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-26	True	NA	-21	True	AATAAA	-35	NA	46089962	46060990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_61276.known	chr20	+	1682	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_6	17.7301825991725	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGGGGGTGAACATG	2	True	NA	NA	False	ATTAAA	-22	NA	46118313	46129858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_61279.nnic	chr20	+	1446	9	NNC	ENSG00000101017.14	novel	1682	9	NA	NA	-30	-143	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_6	34.8308412186671	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	-13	True	NA	7	True	AATAAA	-21	NA	46118247	46129516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_61280.nnic	chr20	+	1589	9	NNC	ENSG00000101017.14	novel	1682	9	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_6	34.8308412186671	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAAGGGTTCTGGAA	-13	True	NA	19	True	TATAAA	-22	NA	46118247	46129659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_61284.known	chr20	+	1623	8	FSM	ENSG00000101017.14	ENST00000372276.7	1623	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	50.4065107553639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGGTGAACATGCTGGG	4	True	NA	NA	False	ATTAAA	-27	NA	46118315	46129863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46128137_46128225_46128329_46128359_46128881
transcript_61286.known	chr20	+	822	8	FSM	ENSG00000101017.14	ENST00000466205.5	822	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	43.5477687518581	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCTGGCACTGACTG	36	False	NA	NA	False	NA	NA	NA	46118347	46129126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_61288.nnic	chr20	+	1352	8	NNC	ENSG00000101017.14	novel	1733	10	NA	NA	-30	-143	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	52.0843115554394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	-13	True	NA	7	True	AATAAA	-21	NA	46118247	46129516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_61295.nnic	chr20	+	1250	7	NIC	ENSG00000101017.14	novel	1623	8	NA	NA	-30	-143	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	51.8448540251478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	-13	True	NA	7	True	AATAAA	-21	NA	46118247	46129516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46128137_46128225_46128329_46128359_46128881
transcript_6130.nic	chr1	-	2371	14	NIC	ENSG00000196505.11	novel	2436	13	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	17.6222693969371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTAACATTTCTCT	NA	False	NA	2	True	AATAAA	-16	NA	117929685	117877221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_61303.known	chr20	-	2175	11	FSM	ENSG00000080189.15	ENST00000317734.12	2175	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	73.2424057496748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTTTTAACAACTAAGA	NA	False	NA	NA	False	ATTAAA	-22	NA	46364458	46349529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358559_46358690_46358764_46364370
transcript_6131.known	chr1	-	2436	13	FSM	ENSG00000196505.11	ENST00000369442.3	2436	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	10.2537256101814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTAACATTTCTCT	-13	True	NA	2	True	AATAAA	-16	NA	117929583	117877221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_61311.known	chr20	-	5740	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	68.5556455969155	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGGGCTTTTTATT	5	True	NA	2	True	ATTAAA	-24	NA	46364404	46345979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_61313.nic	chr20	-	2042	10	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	-12	-206	intron_retention	FALSE	canonical	3	24	junction_8	74.12518606976	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATTCTGGAGACCTT	NA	False	NA	-13	True	AATAAA	-16	NA	46364470	46349735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357703_46358386_46358764_46364370
transcript_61315.known	chr20	-	5820	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	29.9666481275434	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-16	True	NA	-2	True	ATTAAA	-20	NA	46364425	46345983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_61316.known	chr20	-	2447	10	FSM	ENSG00000080189.15	ENST00000243896.6	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	77.4395821843641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	8	True	NA	NA	False	ATTAAA	-24	NA	46364401	46349527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358959_46364370
transcript_6134.known	chr1	+	10004	27	FSM	ENSG00000065183.16	ENST00000349139.6	10004	27	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_1	56.6259527134869	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCACTCGTGTAA	-23	True	NA	9	True	AATAAA	-24	NA	117929738	117966543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_61359.nic	chr20	-	1275	4	ISM	ENSG00000080189.15	ENST00000372230.10	5820	10	-45	10007	-12	-887	5prime_fragment	FALSE	canonical	3	203	junction_2	27.6526068692749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGCCCAGCTCTGTTTG	NA	False	NA	1	True	ATTAAA	-19	NA	46364470	46355990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_46356638_46357622_46357774_46358386_46358764_46364370
transcript_61363.nic	chr20	-	3640	22	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_20	43.8405169872028	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-6	True	NA	-14	True	AATAAA	-19	NA	46406618	46366049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46398696_46398772_46406547
transcript_61364.known	chr20	-	3666	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_20	37.3412892397433	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-3	True	NA	-14	True	AATAAA	-19	NA	46406615	46366049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_61365.known	chr20	-	3574	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_20	45.596573336162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGTGGTTCCTGTTA	-20	True	NA	-19	True	AATAAA	-14	NA	46406632	46366054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
transcript_61366.nic	chr20	-	3602	21	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_20	46.7556146361055	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-14	True	NA	-14	True	AATAAA	-19	NA	46406626	46366049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46406547
transcript_61370.nnic	chr20	-	1086	3	NNC	ENSG00000215452.5	novel	2722	4	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCAGCCTGCGGTATT	NA	False	NA	-3	True	AATAAA	-17	NA	46459327	46414227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_46414965_46457674_46457915_46459218
transcript_61371.nic	chr20	-	2938	3	ISM	ENSG00000215452.5	ENST00000400371.2	2722	4	-51	40765	-51	962	5prime_fragment	FALSE	canonical	2	5	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAAACACATCAACATGG	NA	False	NA	NA	False	AATAAA	-5	NA	46459327	46454992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_46457504_46457596_46457915_46459218
transcript_61372.known	chr20	-	3876	5	FSM	ENSG00000283757.1	ENST00000472805.2	3876	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.53553390593274	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAGAAATAATATACATC	2849	False	NA	NA	False	AATAAA	-30	NA	46481357	46455032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46457915_46459218_46459623_46474500_46474689_46476231_46476326_46481049
transcript_61373.known	chr20	-	2722	4	FSM	ENSG00000215452.5	ENST00000400371.2	2722	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCAGCCTGCGGTATT	31	False	NA	-3	True	AATAAA	-17	NA	46459276	46414227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46414965_46455894_46457504_46457596_46457915_46459218
transcript_61381.known	chr20	-	3890	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	30.5736814924209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGCCAAATTTGT	-3	True	NA	-12	True	AGTAAA	-18	NA	46513554	46499631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
transcript_61385.nnic	chr20	-	2357	4	NNC	ENSG00000198185.12	novel	3890	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	31.5841028929991	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-3	True	NA	-23	True	AATAAA	-21	NA	46513554	46501087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_46503098_46504213_46504307_46504613_46504723_46513409
transcript_61386.nnic	chr20	-	2376	4	NIC	ENSG00000198185.12	novel	2495	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	35.3553390593274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-4	True	NA	-23	True	AATAAA	-21	NA	46513555	46501087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46503098_46504213_46504307_46504613_46504741_46513409
transcript_61390.known	chr20	-	4041	13	FSM	ENSG00000158296.14	ENST00000279027.9	4041	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_12	14.5971363249402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCATGTTCTGGTTCAT	0	True	NA	-6	True	AATAAA	-14	NA	46651459	46557827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46560199_46563413_46563552_46566228_46566391_46575572_46575686_46583571_46583670_46588058_46588164_46589159_46589256_46592403_46592530_46596156_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46651310
transcript_61391.known	chr20	-	2008	12	FSM	ENSG00000158296.14	ENST00000413164.6	2008	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	16.2541793735469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGTCTCGTACAGTT	0	True	NA	NA	False	NA	NA	NA	46651459	46559710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46560199_46563413_46563552_46566228_46566391_46575572_46575686_46583571_46583670_46588058_46588164_46589159_46589256_46592403_46592447_46596156_46596343_46610445_46610610_46613459_46613726_46651310
transcript_61395.nnic	chr20	-	1483	10	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	1256	7	NA	NA	-18	-110	multi-exon	FALSE	canonical	0	0	junction_1	3.91893157523298	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATCACGTCAACATATT	-1	True	NA	NA	False	ATTAAA	-22	NA	46684485	46585457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_-_46585744_46588058_46588164_46589159_46589256_46592403_46592530_46596156_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_61401.nnic	chr20	-	2292	6	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	3283	12	NA	NA	-18	-6592	multi-exon	FALSE	canonical	2	4	junction_4	3.42928563989645	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTGGGTGTATTTCA	-1	True	NA	NA	False	NA	NA	NA	46684485	46594734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_-_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_61402.nic	chr20	-	2195	5	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	3283	12	NA	NA	-18	-6592	multi-exon	FALSE	canonical	0	0	junction_4	5.2618912949623	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTGGGTGTATTTCA	-1	True	NA	NA	False	NA	NA	NA	46684485	46594734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_-_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46684395
transcript_61404.nnic	chr20	-	2225	5	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	3283	12	NA	NA	-18	-6592	multi-exon	FALSE	canonical	0	0	junction_1	3.69966214673719	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTGGGTGTATTTCA	-1	True	NA	NA	False	NA	NA	NA	46684485	46594734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_-_46596343_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_61406.nnic	chr20	-	966	5	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	876	4	NA	NA	-18	0	multi-exon	FALSE	canonical	2	4	junction_3	2.29128784747792	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	-1	True	NA	3	True	ATTAAA	-28	NA	46684485	46608708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_61407.nnic	chr20	-	2240	4	NIC	ENSG00000158296.14	novel	3283	12	NA	NA	4350	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	14.1970262926979	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGACCTGGAGATGA	4507	False	NA	-14	True	AATAAA	-12	NA	46583741	46558428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_46560199_46563413_46563552_46566228_46566391_46583571
transcript_61409.known	chr20	-	3180	2	FSM	ENSG00000172315.6	ENST00000372114.4	3180	2	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTCTCGGGTATGTCTT	1	True	NA	-21	True	ATTAAA	-19	NA	46689444	46684364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_46687232_46689131
transcript_61410.known	chr20	+	4227	5	FSM	ENSG00000197496.6	ENST00000359271.4	4227	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	3.34477204006491	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTGCAACAAACATATC	5	True	NA	29	True	AATAAA	-38	NA	46709648	46736347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_46709741_46725040_46726325_46726863_46726987_46729352_46729489_46733755
transcript_61412.nnic	chr20	-	3961	23	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12314	1	at_least_one_novel_splicesite	FALSE	canonical	3	218	junction_20	64.078464297897	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACGATTTAAAAAAAAA	-4	True	NA	39	True	ATTAAA	-18	NA	47369203	47210439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_61421.nnic	chr20	-	2022	8	NNC	ENSG00000101040.20	novel	670	7	NA	NA	-12240	3402	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	150.274850231983	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGGTGTAAAGATTAT	-4	True	NA	NA	False	NA	NA	NA	47369129	47288393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_47288482_47289074_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_61422.nnic	chr20	-	733	6	NNC	ENSG00000101040.20	novel	670	7	NA	NA	-12314	0	at_least_one_novel_splicesite	FALSE	canonical	3	218	junction_3	92.1555207244797	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	-4	True	NA	NA	False	AATACA	-36	NA	47369203	47291795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_61424.nnic	chr20	-	808	6	NNC	ENSG00000101040.20	novel	5362	22	NA	NA	-12314	0	at_least_one_novel_splicesite	FALSE	canonical	3	236	junction_3	86.3388672615063	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	-4	True	NA	NA	False	AATACA	-36	NA	47369203	47291795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_6143.known	chr1	-	2787	6	FSM	ENSG00000116874.12	ENST00000235521.5	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	15.72768260107	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-2	True	NA	-1	True	ACTAAA	-20	NA	119140653	119031215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_61431.nnic	chr20	-	335	3	NNC	ENSG00000101040.20	novel	341	3	NA	NA	-12314	0	at_least_one_novel_splicesite	FALSE	canonical	3	322	junction_2	42.5	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGAAACCTGGC	-4	True	NA	NA	False	NA	NA	NA	47369203	47310102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_47310205_47347855_47347927_47369041
transcript_61432.known	chr20	+	1809	2	FSM	ENSG00000231119.2	ENST00000413818.2	1809	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTACTGGACACTCAT	11	False	NA	NA	False	ATTAAA	-30	NA	47352560	47354633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_47352741_47353004
transcript_61444.known	chr20	+	3550	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	0	0	0	0	multi-exon	FALSE	canonical	3	1698	junction_14	170.075550001561	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	-8	True	NA	16	True	AATAAA	-22	NA	49046311	49096949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_61453.known	chr20	+	3459	24	FSM	ENSG00000124207.17	ENST00000396192.7	3459	24	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	435.063504914086	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGTTTTCAGTGCTCT	NA	False	NA	27	True	AATAAA	-33	NA	49046245	49096960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_61461.known	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	289.446114595511	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	5	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
transcript_61462.known	chr20	-	3334	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	287.3041396135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_61463.known	chr20	-	3211	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_8	89.0637646109049	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_61464.known	chr20	-	3411	13	FSM	ENSG00000124214.21	ENST00000371828.7	3411	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_8	207.41122598998	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGGTCCTGTTGAG	-1	True	NA	NA	False	AATAAA	-13	NA	49188367	49113340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_61467.known	chr20	-	3154	12	FSM	ENSG00000124214.21	ENST00000371802.5	3154	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	292.305512087429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49188115
transcript_61468.known	chr20	-	3136	12	FSM	ENSG00000124214.21	ENST00000347458.9	3136	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	227.402072284618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49188115
transcript_6147.known	chr1	-	621	5	FSM	ENSG00000116874.12	ENST00000495746.5	621	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	37.4057148040243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGGCCACCGTCCGA	-3	True	NA	NA	False	NA	NA	NA	119140654	119033296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_119033360_119034094_119034214_119045581_119045663_119076349_119076608_119140554
transcript_61470.known	chr20	-	1085	7	FSM	ENSG00000124214.21	ENST00000437404.2	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	374.346282055651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACTTTTCTGAACAC	-1	True	NA	NA	False	AGTAAA	-38	NA	49188367	49124374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_61479.known	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_12	53.041375359242	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	-7	True	NA	33	True	ATTAAA	-27	NA	49219415	49244073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_61487.nic	chr20	+	2033	17	ISM	ENSG00000124228.15	ENST00000618172.5	2570	21	-60	2138	9	-2138	5prime_fragment	FALSE	canonical	3	434	junction_12	44.4061070546609	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGGAAGAAGTTTA	-11	True	NA	NA	False	NA	NA	NA	49219355	49241935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892
transcript_6149.known	chr1	-	2811	6	FSM	ENSG00000116874.12	ENST00000369426.9	2811	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	37.1591173199795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	3	True	NA	-1	True	ACTAAA	-20	NA	119140648	119031215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_119033389_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_61494.known	chr20	-	5235	15	FSM	ENSG00000124201.15	ENST00000371754.8	5235	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.737644975909	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTGTAATGTGTGCC	10	True	NA	NA	False	NA	NA	NA	49278426	49237945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49239301_49241809_49241924_49251526_49251623_49252719_49252831_49253665_49253812_49254494_49254650_49255807_49255948_49257416_49257665_49260462_49260578_49263333_49263484_49264715_49264865_49266134_49266267_49269941_49271751_49275778_49275888_49278020
transcript_61495.known	chr20	+	1075	6	FSM	ENSG00000177410.13	ENST00000450535.5	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	415.599615014259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49281751_49281819_49289044
transcript_61497.known	chr20	+	596	5	FSM	ENSG00000177410.13	ENST00000458653.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	278.309629729192	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1469	False	NA	21	True	AATAAA	-17	NA	49278270	49289260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278398_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_615.known	chr1	+	1273	3	FSM	ENSG00000130939.20	ENST00000377153.5	1273	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	153.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTCTGTATGTCTCT	92	False	NA	NA	False	AATAAA	-19	NA	10033273	10073118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10033695_10072027_10072215_10072453
transcript_61500.known	chr20	+	2608	5	FSM	ENSG00000177410.13	ENST00000371743.8	2608	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	225.169935826255	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTCTGTGCTTCCTGC	1376	False	NA	NA	False	ACTAAA	-34	NA	49278177	49290860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_61503.known	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	264.565091234652	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	-2	True	NA	21	True	AATAAA	-17	NA	49278639	49289260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_61506.known	chr20	+	946	4	FSM	ENSG00000177410.13	ENST00000441722.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_3	283.706812670326	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49289044
transcript_61508.known	chr20	+	504	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	300.428952592049	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	0	True	NA	21	True	AATAAA	-17	NA	49278641	49289260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
transcript_61509.known	chr20	+	860	3	FSM	ENSG00000177410.13	ENST00000417721.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	383.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103_49279209_49289044
transcript_6151.known	chr1	+	745	4	FSM	ENSG00000231365.7	ENST00000425884.6	1227	4	0	482	0	-482	multi-exon	FALSE	canonical	3	5	junction_3	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAATAC	-6	True	NA	NA	False	NA	NA	NA	119140395	119150934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119140794_119146952_119147070_119150564_119150653_119150792
transcript_61512.known	chr20	+	627	2	FSM	ENSG00000177410.13	ENST00000667889.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATTCTCACAGTT	0	True	NA	NA	False	AAAAAG	-15	NA	49278641	49279655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278717_49279103
transcript_61513.known	chr20	+	640	2	FSM	ENSG00000177410.13	ENST00000663883.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTGAATGTTTTATT	0	True	NA	NA	False	AAAAAG	-6	NA	49278641	49279646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49278739_49279103
transcript_61514.known	chr20	+	4929	19	FSM	ENSG00000124228.15	ENST00000484427.5	4929	19	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_11	48.7038163637621	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTATATCTTATTA	NA	False	NA	37	True	ATTAAA	-31	NA	49219346	49244077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_61515.known	chr20	-	5570	10	FSM	ENSG00000124212.6	ENST00000244043.5	5570	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	7.67551823963135	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGAGTGTGATTCT	-8	True	NA	-5	True	ATTAAA	-19	NA	49568137	49503873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49508065_49511027_49511180_49513079_49513262_49514226_49514396_49524057_49524240_49539569_49539722_49544304_49544449_49547840_49548020_49550065_49550190_49568042
transcript_61517.known	chr20	-	4043	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-7	True	NA	NA	False	AATAAA	-19	NA	49915529	49903390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_49906846_49908154_49908593_49915379
transcript_61521.known	chr20	+	2447	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_2	74.0664566453668	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	5	True	NA	18	True	AATAAA	-19	NA	49936396	49953885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_61523.known	chr20	+	580	5	FSM	ENSG00000124226.11	ENST00000625177.3	580	5	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_4	438.430367903502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGACCAGTGAGCAGAGT	7	True	NA	-56	True	NA	NA	NA	49936398	49952128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49952075
transcript_61526.known	chr20	+	565	2	FSM	ENSG00000124226.11	ENST00000624620.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAATTATGGCCAGGCG	7	True	NA	NA	False	TATAAA	-1	NA	49936398	49941971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49936553_49941560
transcript_61527.known	chr20	+	1705	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	0.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	0	True	NA	NA	False	AATAAA	-24	NA	49982979	49988886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_49983142_49983823_49984352_49987871
transcript_61534.known	chr20	-	1155	5	FSM	ENSG00000244687.13	ENST00000483534.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1510.61401009656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCTGTCAAGTGTAACC	-8	True	NA	-16	True	AATATA	-20	NA	50115957	50082559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096482_50096535_50096671_50096821_50115484
transcript_61535.known	chr20	-	2258	5	FSM	ENSG00000244687.13	ENST00000557021.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1742.85993413125	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	2751	False	NA	-3	True	AATAAA	-25	NA	50113198	50081123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50098881_50098982_50113106
transcript_61539.known	chr20	-	2459	5	FSM	ENSG00000244687.13	ENST00000371677.7	2459	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	1712.66727285249	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484_50115622_50115698
transcript_6154.known	chr1	+	1219	3	FSM	ENSG00000232650.6	ENST00000420059.6	1219	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCAGTCCGTGGTTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	119327398	119330815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119328288_119328743_119328790_119330531
transcript_61541.known	chr20	-	549	4	FSM	ENSG00000244687.13	ENST00000490555.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1629.95507777225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGCAAGAGCTTCGG	12	True	NA	-83	True	NA	NA	NA	50113133	50082856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096482_50096821_50113106
transcript_61542.known	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	3400	junction_3	59.218990947912	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50113150	50081123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
transcript_61543.known	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1585.38771984087	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
transcript_61553.known	chr20	-	1983	3	FSM	ENSG00000244687.13	ENST00000396059.7	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	1720	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50113172	50081123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50113106
transcript_61554.known	chr20	-	2387	3	FSM	ENSG00000244687.13	ENST00000415862.6	2387	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1767	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50084128_50084255_50115484
transcript_61556.known	chr20	-	1973	3	FSM	ENSG00000244687.13	ENST00000371657.9	1973	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1692.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	6	True	NA	-3	True	AATAAA	-25	NA	50113139	50081123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50082915_50096671_50096821_50113106
transcript_61559.known	chr20	-	566	3	FSM	ENSG00000244687.13	ENST00000467839.5	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	3400	junction_2	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCAGTGAGGTAGAGAT	-1	True	NA	NA	False	NA	NA	NA	50113146	50083877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50084255_50096671_50096821_50113106
transcript_61561.known	chr20	-	649	3	FSM	ENSG00000244687.13	ENST00000461960.5	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTCAAGAAATTGATTT	2824	False	NA	NA	False	NA	NA	NA	50113125	50095789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50096271_50096671_50096821_50113106
transcript_61562.known	chr20	-	1095	3	FSM	ENSG00000244687.13	ENST00000462217.5	1095	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	56.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTCAAGAAATTGATTT	0	True	NA	NA	False	NA	NA	NA	50115949	50095789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50096271_50096671_50096821_50115484
transcript_61565.known	chr20	-	628	3	FSM	ENSG00000244687.13	ENST00000490289.5	628	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1699.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTGTAATGCGTAGCT	-1	True	NA	NA	False	NA	NA	NA	50113146	50094943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50095383_50096671_50096821_50113106
transcript_61566.nnic	chr20	+	582	3	NNC	ENSG00000231742.6	novel	909	3	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTTTCCCTTCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	50172374	50176672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_50172470_50172922_50173018_50176280
transcript_61567.known	chr20	+	740	3	FSM	ENSG00000231742.6	ENST00000427333.6	740	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	50172534	50173592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50172789_50172922_50173018_50173201
transcript_61568.known	chr20	+	764	3	FSM	ENSG00000231742.6	ENST00000411453.3	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCTTCATTTCAGAG	NA	False	NA	NA	False	AATAAA	-21	NA	50172515	50176676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50172789_50172922_50173018_50176280
transcript_61569.known	chr20	+	3979	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	10.9521969158681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTTTTTGACTTTTTG	11	True	NA	NA	False	ATTAAA	-21	NA	50510382	50585241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_61572.nic	chr20	+	1860	9	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-33	3383	29	-2902	5prime_fragment	FALSE	canonical	3	47	junction_8	10.7441844734721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGTAGGCACTTATGAAA	-22	True	NA	NA	False	TATAAA	-36	NA	50510349	50581858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264
transcript_61574.nic	chr20	+	562	5	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-33	10695	29	-10214	5prime_fragment	FALSE	canonical	3	51	junction_4	10.3772587902586	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGAGATGATCTT	-22	True	NA	NA	False	NA	NA	NA	50510349	50574546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516
transcript_61575.known	chr20	+	3469	9	FSM	ENSG00000196396.10	ENST00000541713.5	3469	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.2171801940825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGGTGCTTCCCATT	NA	False	NA	20	True	AATAAA	-21	NA	50510320	50584760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50510591_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_61577.nnic	chr20	+	1339	6	NNC	ENSG00000124243.19	novel	1378	6	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	117.858559298848	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCTGGTCTGGTGTGA	-41	True	NA	13	True	AATAAA	-13	NA	50795011	50877174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50851941_50852121_50876485
transcript_61578.known	chr20	+	787	6	FSM	ENSG00000124243.19	ENST00000609336.5	787	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	116.635500599089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGAGATGGGGTCTCACT	-22	True	NA	NA	False	TTTAAA	-15	NA	50795030	50876723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50875996_50876094_50876485
transcript_61579.known	chr20	+	1114	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	13.838352503098	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	8	True	NA	16	True	AATAAA	-16	NA	50795060	50877177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
transcript_6158.known	chr1	+	2053	13	FSM	ENSG00000092621.13	ENST00000641213.1	2053	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	897.109974058675	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	NA	False	NA	1	True	AATAAA	-1	NA	119711883	119744201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119724318_119724470_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_61581.known	chr20	+	365	4	FSM	ENSG00000124243.19	ENST00000445038.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	103.428987984779	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCACCCCCGCACCTG	17	True	NA	NA	False	NA	NA	NA	50795069	50876572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50876485
transcript_61584.known	chr20	-	1084	10	FSM	ENSG00000000419.14	ENST00000371584.9	1084	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	140.341734595008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTCTCAATTTTCGT	-1	True	NA	-30	True	ATTAAA	-27	NA	50958532	50934944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941104_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61585.known	chr20	-	1161	10	FSM	ENSG00000000419.14	ENST00000371582.8	1161	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	137.611727895267	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	585	False	NA	-16	True	AATAAA	-26	NA	50958555	50934866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941128_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61590.known	chr20	-	1054	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_8	14.3874945699382	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-1	True	NA	-19	True	AATAAA	-23	NA	50958532	50934869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61592.known	chr20	-	1097	9	FSM	ENSG00000000419.14	ENST00000466152.5	1097	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.166551086398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-1	True	NA	-16	True	AATAAA	-26	NA	50958550	50934866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_50935237_50936147_50936263_50940864_50940956_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61594.nic	chr20	-	1005	8	NIC	ENSG00000000419.14	novel	1054	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	112.805051269155	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-3	True	NA	-19	True	AATAAA	-23	NA	50958552	50934869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_50935237_50936147_50936263_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_61606.known	chr20	-	1918	4	FSM	ENSG00000101115.13	ENST00000395997.3	1918	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	190.431673369275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAACTTGCGTGGAAGG	-14	True	NA	-94	True	AAGAAA	-21	NA	51802475	51784264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_51784685_51788860_51789142_51791332_51792353_51802278
transcript_61607.known	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	68.2853490061293	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	0	True	NA	15	True	AATAAA	-23	NA	51802521	51782330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
transcript_61612.known	chr20	-	3040	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	21.0580151011438	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	2	True	NA	NA	False	AATAAA	-22	NA	52191768	52151277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
transcript_61613.known	chr20	-	762	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.9462219947249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCGCCAAGTTCAAAAT	1114	False	NA	NA	False	NA	NA	NA	52104923	52085240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
transcript_61614.known	chr20	-	2876	5	FSM	ENSG00000020256.20	ENST00000346617.8	2876	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	30.8494327338446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	10	True	NA	NA	False	AATAAA	-22	NA	52191760	52151277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52186831_52187072_52191590
transcript_61615.nnic	chr20	-	743	3	NNC	ENSG00000020256.20	novel	1841	9	NA	NA	0	-24748	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACAAGGATATTCATTTA	-9	True	NA	NA	False	AATAAA	-23	NA	52191779	52185008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_52185323_52186831_52187072_52191590
transcript_61616.nic	chr20	-	1678	2	ISM	ENSG00000020256.20	ENST00000216923.5	3057	6	0	34305	0	-25322	5prime_fragment	FALSE	canonical	3	79	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGCAAAGTGGAAAGGT	-9	True	NA	NA	False	NA	NA	NA	52191779	52185582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_52187072_52191590
transcript_61617.known	chr20	-	5790	6	FSM	ENSG00000171940.14	ENST00000371471.7	5790	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	20.9284495364563	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTTTAGTGTTTAT	-2	True	NA	-24	True	AATATA	-18	NA	53593839	53567070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53593755
transcript_61618.known	chr20	+	1230	4	FSM	ENSG00000101132.10	ENST00000371419.7	1230	4	0	0	0	0	multi-exon	FALSE	canonical	3	2754	junction_1	284.27373349565	734	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACAAACATTTTGGG	-1	True	NA	10	True	AATAAA	-26	NA	54208086	54219961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_54208125_54214350_54214459_54215299_54215441_54219018
transcript_61622.known	chr20	+	1965	8	FSM	ENSG00000101134.12	ENST00000262593.10	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	8.84792146697258	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	-5	True	NA	21	True	AATAAA	-18	NA	54475592	54651169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_54476013_54554932_54555041_54588482_54588598_54588686_54588807_54591615_54591806_54610387_54610524_54643457_54643579_54650414
transcript_61625.known	chr20	+	742	2	FSM	ENSG00000101134.12	ENST00000491469.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTACATTGAATT	-7	True	NA	4	True	AATAAA	-17	NA	54475625	54495154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_54476013_54494799
transcript_61626.known	chr20	+	497	1	FSM	ENSG00000185834.10	ENST00000432629.1	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	88	False	NA	NA	False	NA	NA	NA	55074643	55075140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_55074600_55075100
transcript_61627.known	chr20	+	2987	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	4.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	-8	True	NA	NA	False	AATAAA	-22	NA	56358973	56368663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56359192_56365086_56365263_56366070
transcript_61642.known	chr20	-	2145	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	356.335498728826	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-11	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
transcript_61643.nic	chr20	-	2368	10	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_9	318.388108531586	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-11	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56391942
transcript_61644.known	chr20	-	2238	10	FSM	ENSG00000087586.18	ENST00000395914.5	2238	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	322.81573691504	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGAGTGCTGTGTAATT	NA	False	NA	-16	True	AATAAA	-16	NA	56392295	56369388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392153
transcript_61645.known	chr20	-	2223	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	310.579903637067	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392295	56369389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
transcript_61650.known	chr20	-	2248	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	267.24836295102	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-1	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
transcript_61652.known	chr20	-	2169	9	FSM	ENSG00000087586.18	ENST00000395913.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	260.641516263238	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392337	56369389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392153
transcript_61653.known	chr20	-	2033	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	224.179057897922	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-11	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
transcript_61667.known	chr20	-	2112	10	FSM	ENSG00000087586.18	ENST00000371356.6	2112	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	354.226230285424	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	8	True	NA	-17	True	AATAAA	-15	NA	56392196	56369389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392167
transcript_61672.nic	chr20	+	1839	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-21	-413	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	110.057076101448	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTCATTTGGTTCTT	NA	False	NA	8	True	ATTAAA	-16	NA	56392349	56404049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61673.nic	chr20	+	2045	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-21	-207	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	110.057076101448	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	NA	False	NA	11	True	AATAAA	-15	NA	56392349	56404255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61675.known	chr20	+	4032	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	31.3878957561669	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	-1	True	NA	10	True	AATAAA	-16	NA	56392644	56406362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61679.nic	chr20	+	1829	6	NIC	ENSG00000101138.12	novel	2234	6	NA	NA	-8	-413	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	129.955992551325	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTCATTTGGTTCTT	-9	True	NA	8	True	ATTAAA	-16	NA	56392636	56404049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392816_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61680.nic	chr20	+	2035	6	NIC	ENSG00000101138.12	novel	2234	6	NA	NA	-8	-207	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	129.955992551325	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	-9	True	NA	11	True	AATAAA	-15	NA	56392636	56404255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_56392816_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_61688.nnic	chr20	+	1412	11	Fusion	ENSG00000213714.1_ENSG00000022277.13	novel	2176	9	NA	NA	0	0	multi-exon	FALSE	canonical	3	11	junction_9	268.59301926893	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATGTTTGAGAGCTTG	-31	True	NA	NA	False	AATAAA	-20	NA	56468626	56536520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56527123_56527206_56533422_56533591_56536171
transcript_61691.known	chr20	+	1745	10	FSM	ENSG00000022277.13	ENST00000023939.8	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	241.391081693147	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTTTATCTTTTC	NA	False	NA	33	True	AATAAA	-21	NA	56468584	56518886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56468767_56472325_56472416_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_61694.known	chr20	+	2176	9	FSM	ENSG00000022277.13	ENST00000357348.10	2176	9	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_7	34.8870946769719	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCATGGACTTTT	-31	True	NA	NA	False	AATAAA	-13	NA	56468626	56519449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_61696.known	chr20	+	1572	8	FSM	ENSG00000022277.13	ENST00000395881.7	1572	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	211.382523943138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTTATCTTTTCT	NA	False	NA	34	True	AATAAA	-22	NA	56468613	56518887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56517105_56517202_56518086
transcript_617.known	chr1	+	8624	47	FSM	ENSG00000054523.19	ENST00000620295.2	8624	47	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	70.7115603257707	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAAGGTTCTCGATGTG	NA	False	NA	22	True	AATAAA	-15	NA	10232328	10381596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10273013_10273032_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10320042_10320137_10321708_10321858_10323883_10324063_10324757_10324896_10326110_10326360_10334519_10334639_10336656_10336743_10337073_10337204_10337370_10337534_10339768_10339860_10342049_10342169_10343231_10343288_10345844_10345954_10347760_10347828_10348648_10348734_10352630_10352737_10360928_10361044_10361691_10361826_10363282_10363345_10365099_10365246_10365408_10365649_10368466_10368539_10371140_10371263_10374315_10374466_10374853_10375047_10375254_10375374_10378338
transcript_61701.known	chr20	+	657	5	FSM	ENSG00000022277.13	ENST00000484084.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.60232526704263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACGACCAATAGTTGC	0	True	NA	NA	False	NA	NA	NA	56468657	56473360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_56468767_56470599_56470942_56471613_56471670_56472325_56472416_56473300
transcript_61703.known	chr20	-	4021	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	4.32049379893857	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCCTGTGTCTGTCT	2	True	NA	-15	True	AATAAA	-21	NA	57266641	57168752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
transcript_61707.known	chr20	+	2385	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_9	44.4343698407043	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	5	True	NA	22	True	AATAAA	-19	NA	57351254	57379202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_6171.known	chr1	+	1774	12	FSM	ENSG00000092621.13	ENST00000641947.1	1774	12	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_10	691.400208225225	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATCAATAGGGAGAGAA	NA	False	NA	NA	False	AAGAAA	-10	NA	119711883	119744094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741877_119742806_119743045_119743885
transcript_61711.known	chr20	+	2362	12	FSM	ENSG00000101146.13	ENST00000371242.6	2362	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	133.071285190114	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTTTAAATTCTTT	-27	True	NA	31	True	AATAAA	-28	NA	57351222	57379211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_57351359_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_61712.known	chr20	+	1156	11	FSM	ENSG00000101146.13	ENST00000492498.5	1156	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	158.909911585149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGACTCTGGCTCA	24	True	NA	NA	False	NA	NA	NA	57351273	57378099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373662_57373739_57374606_57374802_57378012
transcript_61717.nic	chr20	-	1245	9	ISM	ENSG00000124224.18	ENST00000244070.7	1474	10	-12	1310	0	0	5prime_fragment	FALSE	canonical	3	34	junction_5	5.97782360060917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTACTTTTTGA	-5	True	NA	-11	True	ATTAAA	-15	NA	58309451	58247055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_61720.known	chr20	-	1474	10	FSM	ENSG00000124224.18	ENST00000244070.7	1474	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	8.0691456246068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGTCGTGTGTTG	7	True	NA	NA	False	ATTAAA	-13	NA	58309439	58245745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_61721.known	chr20	+	8651	7	FSM	ENSG00000124209.4	ENST00000244040.4	8651	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	7.1278015934477	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTCCCAAATGGTT	-9	True	NA	10	True	AATAAA	-21	NA	58309714	58367507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58310013_58311042_58311123_58343717_58343800_58353272_58353345_58353431_58353539_58354155_58354266_58359605
transcript_61722.known	chr20	+	7829	6	FSM	ENSG00000124164.16	ENST00000475243.6	7829	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	16.0673582147159	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTTCAGTGTAAAATT	-8	True	NA	14	True	AATAAA	-25	NA	58389228	58451101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58389518_58418210_58418364_58434601_58434706_58438944_58439026_58440906_58441084_58444076
transcript_61725.known	chr20	+	1834	3	FSM	ENSG00000124164.16	ENST00000395802.7	1834	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	127.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	76	False	NA	27	True	AATAAA	-17	NA	58389312	58445552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58389518_58418210_58418364_58444076
transcript_61727.nic	chr20	+	832	5	NIC	ENSG00000231290.6	novel	581	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	4.63680924774785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCCCCAGCACAAACAG	5450	False	NA	NA	False	AATAAA	-21	NA	58515480	58573824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_58515741_58523168_58523282_58523713_58523807_58547811_58547929_58573575
transcript_61728.known	chr20	+	2270	4	FSM	ENSG00000231290.6	ENST00000661476.1	2270	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGACTCCATCTCAA	36	False	NA	NA	False	NA	NA	NA	58515532	58575431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58515741_58523168_58523282_58523713_58523807_58573575
transcript_6173.known	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	94.1544361739779	6761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	-3	True	NA	15	True	AATAAA	-15	NA	119711933	119744215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_61730.known	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	79.7725071222033	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	-11	True	NA	22	True	ATTAAA	-22	NA	58692799	58715844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
transcript_61731.known	chr20	+	4897	9	FSM	ENSG00000124222.22	ENST00000355957.9	4897	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	107.905919670795	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	13	True	NA	42	True	ATTAAA	-32	NA	58651271	58679526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_61734.known	chr20	+	942	8	FSM	ENSG00000124222.22	ENST00000467096.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	129.627881858426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGGTGTGAGGGGCTT	51	False	NA	NA	False	NA	NA	NA	58651865	58676328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_61735.nic	chr20	+	4796	8	NIC	ENSG00000124222.22	novel	4273	10	NA	NA	-18	0	intron_retention	FALSE	canonical	3	36	junction_1	132.181538739998	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCAATCCTAGTATTAA	-24	True	NA	16	True	AATAAA	-24	NA	58651234	58679500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_61736.known	chr20	+	874	8	FSM	ENSG00000124222.22	ENST00000483434.5	874	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	131.62330294272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCGCCCCGCCAGCTG	45	False	NA	NA	False	GGGGCT	-2	NA	58651303	58676348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58651435_58652072_58652088_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_61741.known	chr20	-	594	1	FSM	ENSG00000268649.5	ENST00000596276.1	594	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTTTGCTCTTGTAT	NA	False	NA	-4	True	AATAAA	-18	NA	58817725	58817131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_58817100_58817700
transcript_61746.nnic	chr20	+	1561	13	NNC	ENSG00000087460.29	novel	3921	12	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_1	2042.68707833579	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	337	False	NA	17	True	AATAAA	-19	NA	58841067	58911190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_58841222_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61749.known	chr20	+	1666	13	FSM	ENSG00000087460.29	ENST00000663479.2	1666	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	2491.65170982133	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-6	True	NA	19	True	AATAAA	-21	NA	58841621	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61752.known	chr20	+	4027	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_1	2059.00769486177	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-4	True	NA	19	True	AATAAA	-21	NA	58852715	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61754.known	chr20	+	1465	13	FSM	ENSG00000087460.29	ENST00000667293.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-7	True	NA	19	True	AATAAA	-21	NA	58888848	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58888905_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61755.known	chr20	+	1476	13	FSM	ENSG00000087460.29	ENST00000464788.6	1476	13	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	2073.87312607487	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-6	True	NA	19	True	AATAAA	-21	NA	58889146	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58889214_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61756.known	chr20	+	1622	13	FSM	ENSG00000087460.29	ENST00000470512.6	1622	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	2447.41446905369	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	9	False	NA	19	True	AATAAA	-21	NA	58889143	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61761.known	chr20	+	1638	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2061.1897639605	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	141	False	NA	19	True	AATAAA	-21	NA	58891980	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61763.known	chr20	+	1583	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2073.65405477599	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	165	False	NA	19	True	AATAAA	-21	NA	58892332	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61766.nnic	chr20	+	1675	12	NNC	ENSG00000087460.29	novel	1782	11	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2528.26400441747	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	181	False	NA	17	True	AATAAA	-19	NA	58840911	58911190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_+_58841222_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61769.known	chr20	+	1625	12	FSM	ENSG00000087460.29	ENST00000462499.6	1625	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2532.02441464604	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-10	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58841876_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61771.known	chr20	+	1622	12	FSM	ENSG00000087460.29	ENST00000482112.6	1622	12	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2369.36740520048	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-10	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58841876_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61775.known	chr20	+	3438	12	FSM	ENSG00000087460.29	ENST00000371102.8	3438	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2542.40390897348	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	197	False	NA	19	True	AATAAA	-21	NA	58853262	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58855334_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61776.known	chr20	+	3432	12	FSM	ENSG00000087460.29	ENST00000349036.9	3432	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	2380.624076106	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	200	False	NA	19	True	AATAAA	-21	NA	58853265	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58855334_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61777.known	chr20	+	1417	12	FSM	ENSG00000087460.29	ENST00000481039.6	1417	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2559.69931085342	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	3	True	NA	19	True	AATAAA	-21	NA	58888858	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58888909_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61780.known	chr20	+	1548	12	FSM	ENSG00000087460.29	ENST00000478585.6	1548	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2482.81740457546	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	7	False	NA	6	True	AATAAA	-45	NA	58889159	58911179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58889354_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61781.known	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	2315.87701824522	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	-7	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61782.known	chr20	+	1499	12	FSM	ENSG00000087460.29	ENST00000492907.6	1499	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2544.29709723693	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	238	False	NA	19	True	AATAAA	-21	NA	58892077	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892210_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61784.known	chr20	+	1537	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2382.6763027395	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	197	False	NA	19	True	AATAAA	-21	NA	58892036	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61797.known	chr20	-	1156	5	FSM	ENSG00000235590.8	ENST00000424094.6	1156	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	10.2591422643416	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-11	True	NA	-2	True	AATAAA	-33	NA	58850903	58818918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_58819256_58841936_58842230_58842432_58842546_58848878_58848918_58850529
transcript_61798.known	chr20	+	1567	13	FSM	ENSG00000087460.29	ENST00000657090.1	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	34	False	NA	19	True	AATAAA	-21	NA	58839782	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58839941_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61799.known	chr20	+	2503	12	FSM	ENSG00000087460.29	ENST00000419558.7	2503	12	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_2	2170.00462733254	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-1	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58840887_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61800.known	chr20	+	1407	12	FSM	ENSG00000087460.29	ENST00000488546.6	1407	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2556.83804921574	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	NA	False	NA	19	True	AATAAA	-21	NA	58888778	58911192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58888819_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61801.known	chr20	+	1533	13	FSM	ENSG00000087460.29	ENST00000468895.6	1533	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	2109.43752870285	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGCAGCATTAAAAAAAAT	50	False	NA	-30	True	AATAAA	-37	NA	58891690	58911143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910684
transcript_61802.known	chr20	+	1839	10	FSM	ENSG00000087460.29	ENST00000476196.5	1839	10	0	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_6	402.534317224271	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	226	False	NA	17	True	AATAAA	-19	NA	58902980	58911190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_61803.nic	chr20	+	2071	16	NIC	ENSG00000101158.15	novel	2137	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	135.710410638077	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	-24	True	NA	34	True	AGTAAA	-34	NA	58981251	58995133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641_58994825_58994925
transcript_61805.known	chr20	+	2137	16	FSM	ENSG00000101158.15	ENST00000460601.5	2137	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	110.163635863504	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	-1	True	NA	34	True	AGTAAA	-34	NA	58981274	58995133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641_58994825_58994925
transcript_61806.nic	chr20	+	2152	15	NIC	ENSG00000101158.15	novel	2237	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_13	103.037564974714	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	-24	True	NA	14	True	AGTAAA	-14	NA	58981251	58995113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641
transcript_61808.known	chr20	+	2237	15	FSM	ENSG00000101158.15	ENST00000652272.2	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_13	55.1397112352073	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	-20	True	NA	14	True	AGTAAA	-14	NA	58981255	58995113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641
transcript_61825.known	chr20	+	1701	6	FSM	ENSG00000101158.15	ENST00000482747.1	1701	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_5	51.4874742048976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	-1	True	NA	NA	False	NA	NA	NA	58981274	58990400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989641_58989857
transcript_61827.nic	chr20	+	1958	5	ISM	ENSG00000101158.15	ENST00000482747.1	1701	6	-23	-17	0	17	intron_retention	FALSE	canonical	3	452	junction_4	10.6418983268964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAACTTCCTTTTATCC	-24	True	NA	NA	False	NA	NA	NA	58981251	58990417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913
transcript_61828.known	chr20	-	2571	5	FSM	ENSG00000101160.15	ENST00000680628.1	2571	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.06155281280883	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGGCTGCCCGTGCCT	15	True	NA	-24	True	AATAAA	-19	NA	59007825	58995186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464_59001645_59006321
transcript_61829.known	chr20	-	3610	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	5224	junction_2	81.5	2791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTAGTTTTGCTTGTC	-6	True	NA	NA	False	AATAAA	-16	NA	59032335	59025474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59028842_59030302_59030430_59032219
transcript_61830.known	chr20	-	1878	2	FSM	ENSG00000124172.10	ENST00000395659.1	1878	2	0	0	0	0	multi-exon	FALSE	canonical	3	5224	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGTGAGACTTTT	-16	True	NA	-8	True	AATAAA	-29	NA	59032345	59028677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59030430_59032219
transcript_61831.known	chr20	-	2503	6	FSM	ENSG00000101166.16	ENST00000355937.9	2503	6	0	0	0	0	multi-exon	TRUE	canonical	3	456	junction_3	45.8798430686069	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCCTGATTATAATT	29	True	NA	-5	True	AATAAA	-18	NA	59042786	59033144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037281_59038465_59038635_59042698
transcript_61833.known	chr20	-	704	6	FSM	ENSG00000101166.16	ENST00000463057.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	202.15182413226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	774	False	NA	-16	True	AATACA	-18	NA	59042732	59034908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037300_59038465_59038635_59042698
transcript_61842.known	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	219.265107803316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	10	True	NA	NA	False	NA	NA	NA	59042805	59034633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
transcript_61845.known	chr20	+	5086	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	14.7271480229163	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	-40	True	NA	23	True	ATTAAA	-23	NA	59940388	59948680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
transcript_61850.known	chr20	+	1429	7	FSM	ENSG00000124215.17	ENST00000497614.1	1429	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.26691175145591	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATTTCTATGATTATG	23	False	NA	NA	False	AATAAA	-21	NA	59994207	60013113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_59994490_59995832_59996055_59996630_59996762_59999585_59999664_60002812_60002867_60006712_60006788_60012526
transcript_61851.known	chr20	-	578	2	FSM	ENSG00000277270.2	ENST00000615619.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGAAGCAGGTACTTGC	NA	False	NA	NA	False	NA	NA	NA	61437367	61434624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_61434876_61437040
transcript_61852.known	chr20	+	1608	1	FSM	ENSG00000283078.1	ENST00000635124.1	1608	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAAAAAATAATAAAAACA	777	False	NA	NA	False	AATAAA	-28	NA	62066829	62068437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62066800_62068400
transcript_61855.known	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	2034.93125737019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-18	True	NA	-10	True	TTTAAA	-23	NA	62143440	62136802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
transcript_61856.known	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4570	junction_4	619.713912489734	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	28	True	NA	-22	True	AATAAA	-16	NA	62143394	62136732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
transcript_61864.known	chr20	-	925	3	FSM	ENSG00000101182.15	ENST00000370858.3	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	4960	junction_1	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAACTGCTGATAAC	-8	True	NA	NA	False	NA	NA	NA	62143430	62139330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62139906_62140817_62140945_62143207
transcript_61867.known	chr20	+	3747	7	FSM	ENSG00000101181.18	ENST00000370823.8	3747	7	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	14.6287388383278	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	-7	True	NA	18	True	CATAAA	-19	NA	62183027	62203568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_6187.known	chr1	+	2794	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	97.7235386178786	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	7	False	NA	1	True	AATAAA	-1	NA	119711900	119744201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
transcript_61872.known	chr20	+	2683	15	FSM	ENSG00000130703.17	ENST00000643412.1	2683	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	102.997126966073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACAGTGGTGTAATTA	7	True	NA	-11	True	NA	NA	NA	62238563	62294851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62238598_62242320_62242435_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_61874.known	chr20	+	3944	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	23.0255839186089	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	13	True	NA	7	True	AATAAA	-17	NA	62238520	62296183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_61877.nic	chr20	+	1077	9	ISM	ENSG00000130703.17	ENST00000642516.1	3427	16	-28	12981	0	-212	5prime_fragment	FALSE	canonical	3	255	junction_6	27.4633278209324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCTTGCCAAGTGTT	13	True	NA	14	True	NA	NA	NA	62238520	62281879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789
transcript_6188.known	chr1	+	1780	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	723.042626682549	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTCTGCACTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	119711885	119744212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
transcript_61880.known	chr20	+	1379	10	FSM	ENSG00000130706.13	ENST00000253003.7	1379	10	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_6	220.954997931957	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	7	True	NA	22	True	AATAAA	-22	NA	62302996	62308862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_61882.known	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	657.446373763671	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	80	False	NA	20	True	AATAAA	-20	NA	62302895	62308860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_61883.known	chr20	-	668	1	FSM	ENSG00000273619.1	ENST00000610979.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGAAGTATGGTCGTTG	4	True	NA	-5	True	AGTAAA	-18	NA	62386970	62386302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62386300_62387000
transcript_61889.known	chr20	+	358	6	FSM	ENSG00000171858.18	ENST00000343986.9	358	6	0	0	0	0	multi-exon	FALSE	canonical	3	3796	junction_5	1260.63111178489	11937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	1	True	NA	14	True	AATAAA	-14	NA	62387102	62388520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308_62388365_62388456
transcript_61893.known	chr20	+	429	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	0	0	0	0	multi-exon	FALSE	canonical	3	5119	junction_1	806.252751933288	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	21	False	NA	13	True	AATAAA	-13	NA	62387122	62388519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
transcript_61900.known	chr20	+	418	4	FSM	ENSG00000171858.18	ENST00000450116.6	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	6240	junction_3	398.601165187571	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	216	False	NA	13	True	AATAAA	-13	NA	62387317	62388519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62387389_62387610_62387675_62387842_62387915_62388308
transcript_61901.known	chr20	+	1002	2	FSM	ENSG00000171858.18	ENST00000370562.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	7124	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	195	False	NA	14	True	AATAAA	-14	NA	62387296	62388520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62387389_62387610
transcript_61902.known	chr20	+	2716	12	FSM	ENSG00000101187.16	ENST00000217159.6	2716	12	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_11	13.1293627145135	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	1	True	NA	27	True	AATATA	-19	NA	62642502	62672293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62671749
transcript_61906.known	chr20	-	758	3	FSM	ENSG00000228705.3	ENST00000689171.1	1906	3	7	1141	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	0	True	NA	NA	False	AATAAA	-15	NA	62776949	62774120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62774570_62775314_62775480_62776805
transcript_61907.known	chr20	+	2752	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	14.0445719051881	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	-6	True	NA	3	True	AATAAA	-16	NA	62796472	62801729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
transcript_61915.known	chr20	-	2707	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	68.5145240076876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	30	True	NA	-18	True	TATAAA	-17	NA	62926469	62905004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
transcript_61916.known	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	62.8700246540432	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-2	True	NA	-11	True	TATAAA	-24	NA	62937952	62904997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_61920.known	chr20	-	677	1	FSM	ENSG00000273759.1	ENST00000619319.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGCTAGTGGAGTTC	9516	False	NA	-1	True	AATAAA	-19	NA	62929297	62928620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_62928600_62929300
transcript_61923.known	chr20	+	4369	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	22.4874965258474	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	12	True	NA	17	True	AGTAAA	-23	NA	62938146	62948475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
transcript_61929.known	chr20	+	3518	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	38.9902943763644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTTTTGTGTATCTGT	-1	True	NA	6	True	AATAAA	-16	NA	62952708	62969585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_61934.known	chr20	+	2594	14	FSM	ENSG00000101194.18	ENST00000370349.7	2594	14	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	59.8169792443346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	-3	True	NA	18	True	ATTAAA	-15	NA	62952706	62968597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_62952890_62953210_62953273_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_61936.known	chr20	-	3198	5	FSM	ENSG00000149658.18	ENST00000370339.8	3198	5	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_4	14.3003496460751	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTCACCTCATTCTT	17	True	NA	-14	True	AATAAA	-18	NA	63216131	63195428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63196735_63202286_63203808_63213863_63213944_63215576_63215602_63215865
transcript_61940.known	chr20	-	1353	7	FSM	ENSG00000101198.15	ENST00000370316.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	15.9965274009358	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-14	True	NA	-5	True	AATAAA	-18	NA	63254463	63240783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_61941.known	chr20	-	1421	6	FSM	ENSG00000101198.15	ENST00000370313.5	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	34.5485166107027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	1046	False	NA	-5	True	AATAAA	-18	NA	63253437	63240783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
transcript_61943.nic	chr20	-	1318	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.873538606074	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	NA	False	NA	-5	True	AATAAA	-18	NA	63254513	63240783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_61948.known	chr20	+	3250	13	FSM	ENSG00000101199.13	ENST00000370283.9	3250	13	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_9	53.057882438794	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCTGGATGCATCCCA	-2	True	NA	31	True	AATAAA	-18	NA	63272812	63289790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_61950.known	chr20	-	1441	8	FSM	ENSG00000075043.20	ENST00000344425.8	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_5	65.1804402863188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGTGTGGTTTATTT	-21	True	NA	81	True	TTTAAA	-20	NA	63472655	63433677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_61951.nic	chr20	-	908	4	ISM	ENSG00000075043.20	ENST00000636255.1	984	8	10830	0	817	0	3prime_fragment	FALSE	canonical	3	769	junction_3	41.1420304149743	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCTGTGTGTGGTTTA	4604	False	NA	78	True	TTTAAA	-17	NA	63442883	63433680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405
transcript_61952.known	chr20	-	545	3	FSM	ENSG00000075043.20	ENST00000629318.1	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTCTCCCATCTCT	NA	False	NA	-1	True	NA	NA	NA	63415035	63413275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63413582_63414087_63414194_63414902
transcript_61953.known	chr20	+	827	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	1141	junction_1	65.335033991471	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGAGAAATGGCT	-5	True	NA	71	True	NA	NA	NA	63520764	63522206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
transcript_61954.known	chr20	+	478	3	FSM	ENSG00000125534.10	ENST00000473620.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	632.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCGCATCCCTCGCC	7	True	NA	NA	False	NA	NA	NA	63520776	63521949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63520895_63521511_63521590_63521667
transcript_61955.known	chr20	+	1090	2	FSM	ENSG00000125531.7	ENST00000370097.2	1090	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTAAAGGCAGCA	-4	True	NA	30	True	AATAAA	-43	NA	63554158	63556695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63554207_63555653
transcript_61958.known	chr20	-	2248	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.851835180516	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-2	True	NA	-8	True	AATAAA	-18	NA	63653424	63639711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_6196.known	chr1	+	1638	10	FSM	ENSG00000092621.13	ENST00000641115.1	1638	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_8	753.295934830461	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	4	False	NA	15	True	AATAAA	-15	NA	119711897	119744215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119742806_119743045_119743885
transcript_61960.nnic	chr20	-	1949	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9735	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	114.5	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	63642659	63639711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63641398_63642107_63642300_63642588
transcript_61961.nic	chr20	-	716	3	ISM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	3698	0	346	5prime_fragment	FALSE	canonical	3	169	junction_2	22	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGGAGTCTGAGGCAGGG	-2	True	NA	NA	False	AATACA	-43	NA	63653424	63643409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr20_-_63643932_63644213_63644310_63653326
transcript_61963.known	chr20	-	1623	8	FSM	ENSG00000101246.20	ENST00000618838.4	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	72.4943347540245	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	155	False	NA	-2	True	NA	NA	NA	63707838	63699455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707809
transcript_61964.nic	chr20	-	1684	8	NIC	ENSG00000101246.20	novel	1623	8	NA	NA	20	0	intron_retention	FALSE	canonical	3	139	junction_7	47.5750749353276	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	37	False	NA	-2	True	NA	NA	NA	63707956	63699455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61965.known	chr20	-	2518	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	73.7889986822603	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCTTCTATTTAAA	17	True	NA	NA	False	TATAAA	-17	NA	63707976	63698646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_61969.nic	chr20	-	1643	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	20	0	intron_retention	FALSE	canonical	3	139	junction_7	47.5750749353276	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	37	False	NA	-27	True	AATAAA	-28	NA	63707956	63699496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61972.nic	chr20	-	859	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	20	-227	combination_of_known_junctions	FALSE	canonical	3	139	junction_7	47.5750749353276	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTAGGCATCCGGAGGCTT	37	False	NA	-8	True	NA	NA	NA	63707956	63700280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61976.nic	chr20	+	1842	7	NIC	ENSG00000197114.12	novel	1867	7	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_4	78.6180994145467	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	-16	True	NA	14	True	ATTAAA	-21	NA	63708036	63736142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_61977.nic	chr20	+	1929	7	NIC	ENSG00000197114.12	novel	1867	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	79.2333052867711	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	-16	True	NA	14	True	ATTAAA	-21	NA	63708036	63736142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_61978.known	chr20	+	1867	7	FSM	ENSG00000197114.12	ENST00000355969.11	1867	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	46.8460836736173	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	-14	True	NA	14	True	ATTAAA	-21	NA	63708038	63736142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_61983.known	chr20	+	1896	7	FSM	ENSG00000197114.12	ENST00000357119.8	1896	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	81.8284112572698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	0	True	NA	14	True	ATTAAA	-21	NA	63708052	63736142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_61984.known	chr20	+	1945	7	FSM	ENSG00000197114.12	ENST00000328969.5	1945	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	82.4055014344714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	37	False	NA	13	True	ATTAAA	-20	NA	63708089	63736141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_61985.known	chr20	+	1890	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	53.5456710564812	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	33	False	NA	14	True	ATTAAA	-21	NA	63708085	63736142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_61991.known	chr20	-	1061	7	FSM	ENSG00000101246.20	ENST00000607873.1	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	94.430603560969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGAGGCCCGTCAGCC	NA	False	NA	NA	False	NA	NA	NA	63708025	63700053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63707866
transcript_61993.known	chr20	-	1612	7	FSM	ENSG00000101246.20	ENST00000618568.4	1612	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	97.9892284329706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-3	True	NA	-27	True	AATAAA	-28	NA	63707996	63699496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700531_63700601_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61994.nic	chr20	-	1610	7	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	28	0	intron_retention	FALSE	canonical	3	12	junction_2	111.014638674366	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	45	False	NA	-2	True	NA	NA	NA	63707948	63699455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700531_63700601_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_61997.nic	chr20	-	1733	7	NIC	ENSG00000101246.20	novel	1698	7	NA	NA	20	0	intron_retention	FALSE	canonical	3	139	junction_6	50.5799696849784	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	37	False	NA	-8	True	NA	NA	NA	63707956	63699477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_61998.known	chr20	-	1698	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	79.6145226841323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-17	True	NA	-8	True	NA	NA	NA	63707916	63699477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_62007.known	chr20	+	2831	6	FSM	ENSG00000197114.12	ENST00000477340.5	2831	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	48.8114740609214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	-14	True	NA	13	True	ATTAAA	-20	NA	63708038	63736141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63734825_63735158_63735565_63735780
transcript_62010.known	chr20	+	464	2	FSM	ENSG00000229299.2	ENST00000447343.2	464	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTCGATATGTCTCTGA	2314	False	NA	3	True	NA	NA	NA	63744688	63745951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63744729_63745527
transcript_62011.known	chr20	+	266	2	FSM	ENSG00000229299.2	ENST00000433905.2	266	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTCTCTGACTACTTA	3171	False	NA	10	True	NA	NA	NA	63745545	63745958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63745676_63745822
transcript_62012.known	chr20	+	2339	8	FSM	ENSG00000101150.18	ENST00000352482.8	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	273.927221080672	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	12	True	NA	37	True	AATAAA	-26	NA	63865289	63891545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_62014.known	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_4	155.676659208188	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	-8	True	NA	30	True	AATAAA	-19	NA	63865269	63891538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
transcript_62016.known	chr20	+	2275	7	FSM	ENSG00000101150.18	ENST00000358548.4	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	294.350697864526	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	16	True	NA	37	True	AATAAA	-26	NA	63865293	63891545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_62019.known	chr20	+	2237	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	128.799689440619	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	12	True	NA	37	True	AATAAA	-26	NA	63865289	63891545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
transcript_62022.known	chr20	+	2197	5	FSM	ENSG00000101150.18	ENST00000611972.4	2197	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	296.838339841739	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	NA	False	NA	37	True	AATAAA	-26	NA	63865227	63891545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63889189_63889239_63889849
transcript_62023.known	chr20	-	1838	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	192.812177297716	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-13	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_62026.nnic	chr20	-	1812	15	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_6	201.443173229614	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-13	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_62036.nnic	chr20	-	1285	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-187	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	189.380730869035	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	9693	False	NA	NA	False	AATAAA	-21	NA	63941796	63939828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63941382
transcript_62039.nnic	chr20	-	991	7	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_6	181.714748988628	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	9832	False	NA	NA	False	AATAAA	-21	NA	63941354	63939828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135
transcript_62043.known	chr20	+	3047	21	FSM	ENSG00000101161.8	ENST00000266079.5	3047	21	0	0	0	0	multi-exon	TRUE	canonical	3	543	junction_11	100.615344257226	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTGCTGGTTTTC	-9	True	NA	23	True	ATTAAA	-24	NA	63981131	64033100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
transcript_62051.known	chr20	+	1182	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	0	0	0	0	multi-exon	FALSE	canonical	2	277	junction_6	77.7109236486158	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	27	True	NA	26	True	ATTAAA	-16	NA	64063197	64072347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_62053.nnic	chr20	-	1441	7	NNC	ENSG00000171700.14	novel	1510	6	NA	NA	50	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	48.4584587272668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	0	True	NA	-6	True	TTTAAA	-6	NA	64079938	64073180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr20_-_64073641_64073659_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
transcript_62056.known	chr20	-	1619	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	29.654004788561	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-16	True	NA	-6	True	TTTAAA	-6	NA	64079518	64073180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
transcript_62057.known	chr20	-	1510	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	35.4423475520457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	4960	False	NA	-6	True	TTTAAA	-6	NA	64079988	64073180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
transcript_62059.nic	chr20	-	1749	5	NIC	ENSG00000171700.14	novel	1619	6	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	45.996603135449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	5202	False	NA	-6	True	TTTAAA	-6	NA	64079746	64073180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079293
transcript_62060.nnic	chr20	-	1362	5	NIC	ENSG00000171700.14	novel	1510	6	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	46.4219775537406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	0	True	NA	-6	True	TTTAAA	-6	NA	64079938	64073180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079872
transcript_62062.known	chr20	+	3859	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_4	47.4442831118777	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	-9	True	NA	17	True	AATAAA	-18	NA	64255747	64276226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
transcript_62067.known	chr21	-	3188	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_20	53.2971622133862	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	4	True	NA	37	True	ATTAAA	-16	NA	5154658	5130870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_62071.nnic	chr21	-	1006	8	NNC	ENSG00000280071.4	novel	1584	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_1	285.564460716823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	NA	False	NA	NA	False	AATAAA	-17	NA	5128445	5116340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_5116482_5117135_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_62072.known	chr21	-	1584	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_1	202.962845532542	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	-7	True	NA	NA	False	AATAAA	-17	NA	5128369	5116340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_62079.known	chr21	-	898	6	FSM	ENSG00000280071.4	ENST00000624120.3	898	6	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_2	327.24828494585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGATGTTTCTTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	5128372	5116936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5117232_5118690_5118848_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_62082.known	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	302.222699346029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	89	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_62084.known	chr21	-	807	5	FSM	ENSG00000280071.4	ENST00000624714.3	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	84.5857553019419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	NA	False	NA	NA	False	NA	NA	NA	5128378	5121448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_62088.known	chr21	+	1604	4	FSM	ENSG00000274333.4	ENST00000624627.3	1604	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	77.9914525231238	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAAGTCTTTGGATTTTT	NA	False	NA	NA	False	TATAAA	-21	NA	5553668	5591228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_5553839_5566124_5566184_5585822_5585988_5590018
transcript_62090.known	chr21	+	549	3	FSM	ENSG00000274333.4	ENST00000619252.4	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	70.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGGGCTCCCTAACA	NA	False	NA	NA	False	NA	NA	NA	5553636	5590200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_5553839_5585822_5585988_5590018
transcript_62096.nnic	chr21	+	886	2	NNC	ENSG00000274333.4	novel	835	2	NA	NA	0	-29414	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATTTATTAAATTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	5553668	5556955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_5553839_5556239
transcript_62097.nnic	chr21	+	987	2	NNC	ENSG00000274333.4	novel	835	2	NA	NA	0	-29313	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5553668	5557056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_5553839_5556239
transcript_62099.known	chr21	+	835	2	FSM	ENSG00000274333.4	ENST00000623436.3	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATAGAGCCGGGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	5553668	5590683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_5553839_5590018
transcript_621.known	chr1	+	107	1	FSM	ENSG00000199562.1	ENST00000362692.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAACAA	3247	False	NA	NA	False	NA	NA	NA	10298965	10299072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10299000_10299100
transcript_62105.known	chr21	-	2380	4	FSM	ENSG00000275496.4	ENST00000621924.4	2380	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	81.4138945280363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	6267304	6228965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6230952_6234982_6235148_6254790_6254850_6267134
transcript_62109.known	chr21	-	859	3	FSM	ENSG00000275496.4	ENST00000617746.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	71	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	6	False	NA	NA	False	NA	NA	NA	6267275	6230398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6230952_6234982_6235148_6267134
transcript_62112.known	chr21	-	572	3	FSM	ENSG00000275496.4	ENST00000623405.3	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAACCTGGACCTT	3	True	NA	NA	False	NA	NA	NA	6267278	6230695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6230952_6235988_6236161_6267134
transcript_62113.known	chr21	-	465	2	FSM	ENSG00000275496.4	ENST00000624446.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCATCTCAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	6267313	6230665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6230952_6267134
transcript_62116.nnic	chr21	-	990	2	NNC	ENSG00000275496.4	novel	2380	4	NA	NA	-3	-31320	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	6267307	6263916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_6264734_6267134
transcript_62119.known	chr21	+	665	4	FSM	ENSG00000278903.4	ENST00000623738.3	665	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	25.2234458831902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAAATGATTTCTCCAA	-16	True	NA	NA	False	NA	NA	NA	6318439	6356986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_6318605_6320871_6320975_6322599_6322698_6356687
transcript_6212.known	chr1	+	1180	5	FSM	ENSG00000092621.13	ENST00000641573.1	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	93.5748363610645	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	-2	True	NA	NA	False	ACTAAA	-17	NA	119711934	119727684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003
transcript_62120.known	chr21	+	767	3	FSM	ENSG00000278903.4	ENST00000688828.1	1395	3	97	531	0	-105	multi-exon	FALSE	canonical	2	5	junction_2	33.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTATTTATTAAATT	39	False	NA	NA	False	AATAAA	-16	NA	6318494	6321717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_6318605_6320871_6320975_6321163
transcript_62128.nic	chr21	-	2313	18	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	476.252709807111	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6467545	6444868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_62130.nnic	chr21	-	2291	18	NNC	ENSG00000274276.5	novel	2353	18	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	120	junction_1	610.150659255253	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6467545	6444868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_6445326_6445561_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_62132.known	chr21	-	1992	18	FSM	ENSG00000274276.5	ENST00000624934.3	1992	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	778.426204852704	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGAGCATCCGTCTCC	NA	False	NA	NA	False	NA	NA	NA	6467532	6445432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6445662_6447735_6447778_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_62139.known	chr21	-	2453	17	FSM	ENSG00000274276.5	ENST00000624406.3	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_16	618.140811223462	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	1	True	NA	NA	False	TATAAA	-14	NA	6467509	6444868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6464982_6467447
transcript_62140.known	chr21	-	2514	17	FSM	ENSG00000274276.5	ENST00000398168.6	2495	17	-19	0	0	0	multi-exon	FALSE	canonical	3	1666	junction_10	306.224794881146	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6467532	6444868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_62152.known	chr21	-	963	9	FSM	ENSG00000275895.7	ENST00000620065.4	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_6	2055.52005280902	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTTGGTGTAACTTAT	42	False	NA	NA	False	AATAAA	-17	NA	6499202	6484625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6493043_6493111_6495992_6496081_6499128
transcript_62159.known	chr21	-	945	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_6	885.778177419063	2512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-4	True	NA	NA	False	AATAAA	-20	NA	6499248	6484622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
transcript_62161.known	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2268	junction_5	1688.83558484924	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	42	False	NA	NA	False	NA	NA	NA	6499202	6484708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
transcript_62169.known	chr21	-	3982	3	FSM	ENSG00000275895.7	ENST00000636177.1	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	2589	junction_1	1681.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAAAGAGTTTTGAGCA	42	False	NA	NA	False	NA	NA	NA	6499202	6489290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_6493111_6495992_6496081_6499128
transcript_62170.nnic	chr21	-	778	4	NIC	ENSG00000280145.3	novel	785	4	NA	NA	-7	8121	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	16.9377946878833	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTCTATACTTGTTGC	-4	True	NA	NA	False	AATAAA	-7	NA	6670702	6659182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_6659579_6666428_6666527_6668151_6668255_6670521
transcript_62172.nnic	chr21	+	989	2	NIC	ENSG00000280164.1	novel	1032	3	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	6721819	6725209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_6721992_6724392
transcript_62176.known	chr21	+	2247	4	FSM	ENSG00000277067.4	ENST00000623095.3	2247	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	91.2152521359352	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7048890	7087097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7049061_7061346_7061406_7081048_7081214_7085244
transcript_62180.known	chr21	+	859	3	FSM	ENSG00000277067.4	ENST00000621909.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	80	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	7	False	NA	NA	False	NA	NA	NA	7048919	7085797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7049061_7081048_7081214_7085244
transcript_62185.nnic	chr21	+	2033	2	NIC	ENSG00000277067.4	novel	2247	4	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7048880	7087097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_7049061_7085244
transcript_62186.nnic	chr21	+	2087	2	NIC	ENSG00000277067.4	novel	859	3	NA	NA	-10	54	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCACTCAATATCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	7048880	7087151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_7049061_7085244
transcript_62187.nnic	chr21	+	2998	5	Fusion	ENSG00000277067.4_ENSG00000280330.1	novel	2247	4	NA	NA	-10	733	multi-exon	FALSE	canonical	0	0	junction_3	28.7347785792757	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTTTCACACGCTGT	NA	False	NA	NA	False	AGTAAA	-33	NA	7048880	7131020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr21_+_7049061_7081048_7081214_7109977_7110161_7110480_7110600_7128669
transcript_62190.known	chr21	+	2247	4	FSM	ENSG00000276077.4	ENST00000625096.3	2247	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	90.4814284198083	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7430668	7468875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7430839_7443124_7443184_7462826_7462992_7467022
transcript_62192.known	chr21	+	994	3	FSM	ENSG00000276077.4	ENST00000624461.3	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	76	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCAGGAAAAAGCGTCT	9	False	NA	NA	False	NA	NA	NA	7430729	7467742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7430839_7462826_7462992_7467022
transcript_62198.nnic	chr21	+	956	2	NNC	ENSG00000276077.4	novel	572	3	NA	NA	5	-31320	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	9	False	NA	NA	False	ATTAAA	-16	NA	7430699	7434056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_7430839_7433239
transcript_62199.known	chr21	+	1193	5	FSM	ENSG00000273590.5	ENST00000622934.3	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	99.6857562543416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATCTTGTTTTACAG	NA	False	NA	NA	False	AATAAA	-22	NA	7744970	7772246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7769186_7769376_7771566
transcript_6220.known	chr1	-	6927	5	FSM	ENSG00000265808.4	ENST00000578049.4	6927	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	16.9115345252878	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGGTCCCCTTCTGTT	-25	True	NA	NA	False	TATAAA	-40	NA	120176520	120150897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_120157193_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_62201.known	chr21	+	843	4	FSM	ENSG00000273590.5	ENST00000619874.5	870	4	24	3	4	-2	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7744974	7758627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7758104
transcript_62205.nic	chr21	+	994	2	ISM	ENSG00000278996.1	ENST00000623664.1	2498	7	24973	3933	24973	-3933	internal_fragment	FALSE	canonical	3	118	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	2607	False	NA	NA	False	AATAAA	-15	NA	8222592	8223713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_8223058_8223184
transcript_62209.nic	chr21	+	1398	2	ISM	ENSG00000280441.3	ENST00000651958.1	840	4	24522	-231	24522	231	3prime_fragment	FALSE	canonical	3	119	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	3490	False	NA	NA	False	AATAAA	-15	NA	8405187	8406712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_8406057_8406183
transcript_62210.nnic	chr21	+	901	4	FSM	ENSG00000224905.8	ENST00000690295.1	905	4	0	4	0	-4	multi-exon	FALSE	canonical	3	8	junction_3	34.8425027803687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGCCTAAGTACGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14027414	14124620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14113338_14113379_14124137
transcript_62211.known	chr21	+	812	3	FSM	ENSG00000224905.8	ENST00000448463.3	816	3	4	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_2	40.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCTAAAATGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	14027418	14089046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14088608
transcript_62215.known	chr21	+	1332	3	FSM	ENSG00000224905.8	ENST00000428809.5	1332	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	28	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	NA	False	NA	11	True	AATAAA	-27	NA	14027420	14144468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14143508
transcript_62217.known	chr21	+	1084	3	FSM	ENSG00000224905.8	ENST00000432621.5	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	36	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	NA	False	NA	11	True	AATAAA	-27	NA	14027420	14144468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14143756
transcript_62218.known	chr21	+	553	3	FSM	ENSG00000224905.8	ENST00000653756.2	578	3	25	0	19	0	multi-exon	FALSE	canonical	1	1	junction_2	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTCTTCATTGA	1	True	NA	NA	False	AAAAAG	-20	NA	14027439	14088783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14027598_14083949_14084145_14088583
transcript_62221.known	chr21	+	680	5	FSM	ENSG00000185272.14	ENST00000468788.5	680	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.5199840255489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCCACTTCCTAATAGT	NA	False	NA	NA	False	TATAAA	-44	NA	14216144	14227054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14216283_14219552_14219726_14221096_14221170_14224437_14224538_14226858
transcript_62222.known	chr21	+	1992	5	FSM	ENSG00000185272.14	ENST00000468643.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.4013220313574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14216129	14228372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14216283_14219552_14219726_14221096_14221170_14224437_14224538_14226879
transcript_62227.known	chr21	+	1955	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.54835134966506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	-2	True	NA	NA	False	AATAAA	-18	NA	14216156	14228372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
transcript_62229.nnic	chr21	+	1136	5	NNC	ENSG00000185272.14	novel	1955	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.9687123493429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCTTTTGAAATAT	NA	False	NA	2	True	AATAAA	-13	NA	14216136	14227384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_14216432_14219562_14219726_14221096_14221170_14224437_14224538_14226879
transcript_62233.known	chr21	-	3945	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_1	14.2214626533279	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTACTTTTTCATTCAG	-5	True	NA	-3	True	AATAAA	-27	NA	14383146	14371114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
transcript_62234.nnic	chr21	-	257	4	NNC	ENSG00000155307.19	novel	220	3	NA	NA	-440	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	18.6726180988812	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTATAAAAGTCTCT	-3	True	NA	0	True	AATAAA	-17	NA	14616456	14612504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_14612646_14612875_14612914_14615975_14616017_14616419
transcript_62236.known	chr21	+	426	5	FSM	ENSG00000215386.14	ENST00000602901.6	426	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGATTGCTGTGCATT	21	False	NA	NA	False	AATAAA	-20	NA	16279762	16607137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_16279863_16391613_16391686_16487489_16487539_16537378_16537440_16606993
transcript_62240.known	chr21	+	1445	8	FSM	ENSG00000154639.19	ENST00000400169.1	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	392.467807077009	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAATACATTGA	9	False	NA	-23	True	TTTAAA	-29	NA	17513129	17593579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427_17565612_17593151
transcript_62243.known	chr21	+	5593	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_6	125.653513900549	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	16	True	NA	2	True	AATAAA	-15	NA	17513042	17570100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
transcript_62250.known	chr21	+	1080	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_4	488.800061374792	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	19	True	NA	NA	False	AATATA	-24	NA	17513045	17565852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
transcript_62253.known	chr21	-	1485	6	FSM	ENSG00000154640.15	ENST00000339775.10	1485	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	92.9933330943676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	30	True	NA	-1	True	AATAAA	-19	NA	17612844	17593652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17594333_17598616_17598825_17604144_17604277_17604859_17604998_17608971_17609153_17612698
transcript_62254.known	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	33.3841279652472	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	16	False	17612917	-1	True	AATAAA	-19	NA	17612901	17593652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
transcript_62258.known	chr21	-	1593	5	FSM	ENSG00000154642.11	ENST00000400559.7	1593	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	65.2629297534213	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTGTTTTAATTTCT	264	False	NA	-3	True	GATAAA	-19	NA	17819386	17792803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17793579_17795207_17795271_17796581_17797119_17818191_17818326_17819302
transcript_62261.known	chr21	-	1090	4	FSM	ENSG00000154642.11	ENST00000400558.7	1090	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72.4538167079938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTAGGGCTAATCATT	264	False	NA	-17	True	AATAAA	-19	NA	17819386	17793246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17793582_17796581_17797119_17818191_17818326_17819302
transcript_62263.known	chr21	-	665	2	FSM	ENSG00000154642.11	ENST00000482915.1	665	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATCACACACACTGTT	-8	True	NA	NA	False	TTTAAA	-22	NA	17819362	17817720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_17818326_17819302
transcript_62268.known	chr21	-	1784	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	43.1530705744099	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCCCAGTCTCAAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	23384920	23361103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_62277.nnic	chr21	-	1592	4	NIC	ENSG00000228592.2	novel	1784	5	NA	NA	-31	7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	124.835892274618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAAGTATGTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	23384877	23361096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_23362240_23372326_23372449_23372947_23373085_23384687
transcript_62279.nnic	chr21	-	1102	4	NIC	ENSG00000228592.2	novel	1784	5	NA	NA	-103	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	124.835892274618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGTGTGTGTTTATGT	NA	False	NA	NA	False	AATAAA	-13	NA	23385023	23361732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_23362240_23372326_23372449_23372947_23373085_23384687
transcript_62282.known	chr21	-	2848	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.4882274061286	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	NA	False	NA	NA	False	AAAAAG	-22	NA	23384846	23361763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
transcript_6229.known	chr1	-	715	3	FSM	ENSG00000223804.5	ENST00000616141.4	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	1129	False	NA	NA	False	AATAAA	-34	NA	120341871	120267333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_120267839_120340755_120340811_120341716
transcript_62293.known	chr21	-	1074	10	FSM	ENSG00000154719.14	ENST00000352957.9	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	100.700264199636	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	10	True	NA	NA	False	AATAAA	-20	NA	25607481	25585655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_6230.known	chr1	-	625	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	1161	False	NA	NA	False	AATAAA	-31	NA	120341839	120267336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_120267839_120341716
transcript_62305.known	chr21	+	4351	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	6.09998988058258	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	-3	True	NA	15	True	AATAAA	-5	NA	25639257	25717562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
transcript_62307.known	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	46.3755469835633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	9916	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_62312.known	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	21.9443741208437	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	3	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_6232.nnic	chr1	+	667	3	NIC	ENSG00000226067.7	novel	1261	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	17.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1061	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_120913451_120952438_120952626_120953219
transcript_62321.known	chr21	-	589	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	2527.54459654029	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-3	True	NA	0	True	AATAAA	-38	NA	25734904	25724479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
transcript_62324.known	chr21	-	589	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	2421.93490140975	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	675	False	NA	0	True	AATAAA	-38	NA	25735033	25724479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
transcript_62325.known	chr21	-	826	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	2407.42494979364	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-30	True	NA	0	True	AATAAA	-38	NA	25735646	25724479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
transcript_62326.known	chr21	-	647	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	2411.16933365443	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-23	True	NA	0	True	AATAAA	-38	NA	25735639	25724479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
transcript_62328.known	chr21	-	526	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	4615	junction_3	391.063791329354	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTCTTGATGAATTGA	-3	True	NA	-20	True	AATAAA	-18	NA	25734904	25724499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
transcript_62329.known	chr21	-	1179	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	2382.15257464523	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	35	False	NA	0	True	AATAAA	-38	NA	25735673	25724479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
transcript_6233.known	chr1	+	821	3	FSM	ENSG00000226067.7	ENST00000621058.5	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	-8	True	NA	NA	False	AATAAA	-31	NA	120913220	120953463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_120913451_120952438_120952786_120953219
transcript_62330.known	chr21	-	3583	18	FSM	ENSG00000142192.21	ENST00000346798.8	3583	18	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_11	192.437937687951	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-5	True	NA	-27	True	AATAAA	-19	NA	26170770	25880549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_62331.known	chr21	-	3355	16	FSM	ENSG00000142192.21	ENST00000348990.9	3355	16	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	261.58995903258	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-2	True	NA	-27	True	AATAAA	-19	NA	26170767	25880549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_62333.known	chr21	-	3072	4	FSM	ENSG00000166265.13	ENST00000299340.9	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	58.9594964549581	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTCTTGTGTCCA	16	True	NA	NA	False	AATAAA	-31	NA	26573255	26466208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_26468632_26480271_26480430_26566265_26566369_26572867
transcript_62334.known	chr21	-	3099	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	113.877126763894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATATTTTCATTGTCTT	-15	True	NA	NA	False	AATAAA	-24	NA	26573286	26466215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
transcript_62337.known	chr21	-	735	4	FSM	ENSG00000166265.13	ENST00000400043.3	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	175.807344050874	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTTCACCCTGGAA	95	False	NA	NA	False	NA	NA	NA	26573176	26477970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_26478136_26480271_26480430_26566265_26566369_26572867
transcript_6234.known	chr1	+	1261	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1061	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_120913451_120952438
transcript_62342.nnic	chr21	+	2243	3	Antisense	novelGene_ENSG00000236532.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAATATCTTACTTTTT	NA	False	NA	NA	False	GATAAA	-14	NA	28161737	28168767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr21_+_28161988_28163569_28163763_28166967
transcript_62344.known	chr21	+	874	2	FSM	ENSG00000232079.7	ENST00000423808.2	874	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGCTCAATGTTACTA	NA	False	NA	NA	False	GATAAA	-11	NA	28089888	28102790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_28090522_28102549
transcript_62347.known	chr21	-	1293	7	FSM	ENSG00000156239.12	ENST00000460212.1	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	37.1008385649465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-7	True	NA	-4	True	AATAAA	-17	NA	28885371	28872190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_28872740_28876311_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_62349.known	chr21	-	4861	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	25.1507455157894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-3	True	NA	-4	True	AATAAA	-17	NA	28885367	28872190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_6235.known	chr1	+	692	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	19.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1033	False	NA	NA	False	AATAAA	-28	NA	120913183	120953460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_120913451_120952438_120952626_120953222
transcript_62352.known	chr21	-	4781	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	34.2226167906547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-7	True	NA	-4	True	AATAAA	-17	NA	28885371	28872190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_62356.nic	chr21	-	3483	19	ISM	ENSG00000198862.14	ENST00000361371.10	7677	30	-3	19399	-3	10863	5prime_fragment	FALSE	canonical	3	89	junction_11	10.632613466867	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGAAAGAATTTAG	9878	False	28992902	NA	False	NA	NA	NA	28992880	28947542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_28947607_28952159_28952265_28953216_28953377_28956761_28956949_28957331_28957477_28958385_28958540_28959457_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_62358.nic	chr21	-	1682	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	69	5567	-3	11	5prime_fragment	FALSE	canonical	3	89	junction_2	10.7542698956114	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGTTAGATTTGCTG	9878	False	28992902	NA	False	AGTAAA	-9	NA	28992880	28966883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_62359.nic	chr21	-	1500	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	69	5749	-3	-171	5prime_fragment	FALSE	canonical	3	89	junction_2	10.7542698956114	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAAAAACAGCTCACAA	9878	False	28992902	6	True	NA	NA	NA	28992880	28967065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_6236.known	chr1	+	7091	10	FSM	ENSG00000171943.12	ENST00000367123.8	7091	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	85.0790482107343	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAACAGAAATTGTATA	-5	True	NA	NA	False	AATAAA	-21	NA	121184974	121392874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382700_121382926_121386505_121386608_121387633
transcript_62364.known	chr21	+	2924	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	14.58467698539	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	-7	True	NA	8	True	AATAAA	-17	NA	29024667	29054488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_62367.known	chr21	+	2960	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	16.4531420206884	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	NA	False	NA	8	True	AATAAA	-17	NA	29024628	29054488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_6238.known	chr1	-	2396	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	31.8468557666565	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAGGCTAATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121184340	121167645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
transcript_62381.known	chr21	-	636	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTTGTTTGAGACG	NA	False	NA	NA	False	AATAAA	-16	NA	29024890	29024254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29024300_29024900
transcript_6239.known	chr1	-	1773	4	FSM	ENSG00000188610.12	ENST00000355228.8	1773	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.259299015623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	424	False	NA	NA	False	AATAAA	-18	NA	121183911	121167719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183457
transcript_62393.known	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	657.309641102057	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	8	True	NA	-20	True	AATAAA	-21	NA	29073639	29056323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
transcript_62394.known	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_9	166.806392110673	5145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-1	True	NA	-22	True	AATAAA	-19	NA	29073648	29056325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
transcript_62418.known	chr21	-	1862	16	FSM	ENSG00000156261.13	ENST00000626972.2	1862	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	855.224867115856	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTATTGTCTAATGA	296	False	NA	-25	True	AATAAA	-16	NA	29073351	29056328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29071951_29071989_29073259
transcript_62419.nnic	chr21	+	830	3	Genic_Genomic	ENSG00000186971.3	novel	797	1	NA	NA	-3261	0	multi-exon	FALSE	canonical	1	2	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTCACATTGTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	30426968	30431026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr21_+_30427107_30427349_30427437_30430421
transcript_62420.known	chr21	-	4160	13	FSM	ENSG00000156299.14	ENST00000636887.1	4160	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	19.5638200655075	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAATGCTTGTCAAAC	2	True	NA	-47	True	NA	NA	NA	31160909	31118457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31160444
transcript_62428.known	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1068.55542088373	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	1	True	NA	59	True	ATTAAA	-22	NA	31659692	31668931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_62429.known	chr21	+	865	5	FSM	ENSG00000142168.15	ENST00000389995.4	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1068.55542088373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	2	False	NA	59	True	ATTAAA	-22	NA	31659665	31668931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_31659785_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_62430.known	chr21	-	1546	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_1	15.2704780540755	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTAAGATTGATTTTT	-15	True	NA	-22	True	AATAAA	-13	NA	32279049	32268227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
transcript_62435.known	chr21	-	10818	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_21	21.4633779447175	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCGGATATGTCTT	6	True	NA	NA	False	ATTAAA	-21	NA	32393012	32311017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
transcript_62436.known	chr21	+	831	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGTACATATTTTAA	-12	True	NA	NA	False	AATAAA	-24	NA	32393129	32393960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_32393100_32394000
transcript_62437.known	chr21	-	4781	8	FSM	ENSG00000265590.10	ENST00000673807.1	4781	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	422.504389543675	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAGAGCAAACATATA	-16	True	NA	NA	False	NA	NA	NA	32612865	32573784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_62438.known	chr21	+	492	5	FSM	ENSG00000166979.13	ENST00000496615.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	6.64736790015417	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGTCATCAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	32493652	32514880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_32493763_32495026_32495171_32501414_32501496_32503925_32504016_32514813
transcript_62441.nic	chr21	-	1635	7	NIC	ENSG00000159079.19	novel	3516	7	NA	NA	-262	-5	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	320.94361740897	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTGTAAATCGTTTT	-16	True	NA	NA	False	AATAAA	-14	NA	32612865	32601671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32609955_32612104
transcript_62442.known	chr21	-	3516	7	FSM	ENSG00000159079.19	ENST00000290155.8	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_6	72.7682775818022	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCGACCATCAAACTG	1	True	NA	NA	False	AATAAA	-19	NA	32612377	32599353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_62446.known	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	331.537388540116	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	26	True	NA	NA	False	AATAAA	-19	NA	32612352	32601666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_62448.known	chr21	-	1243	6	FSM	ENSG00000159079.19	ENST00000300260.7	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	372.044298437699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTACTGCCCTCTGT	246	False	NA	NA	False	TTTAAA	-12	NA	32612603	32601784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32609837_32610006_32612104
transcript_6245.known	chr1	-	164	1	FSM	ENSG00000206737.1	ENST00000384010.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGTAGTTTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	143729570	143729406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_143729400_143729600
transcript_62455.known	chr21	-	2503	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_4	47.5341982156005	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-1	True	NA	NA	False	AATAAA	-19	NA	32612586	32601666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_6246.known	chr1	+	2675	2	FSM	ENSG00000232721.3	ENST00000443018.3	2743	2	68	0	68	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATGGTACCTGGTTTT	24	False	NA	NA	False	AATAAA	-16	NA	143736065	143739506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_143736124_143736889
transcript_62462.known	chr21	+	1941	7	FSM	ENSG00000243646.10	ENST00000290200.7	1941	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	5.64702478203247	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCATGATACTACCTG	-11	True	NA	18	True	ATTAAA	-24	NA	33266366	33297221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33266515_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_62464.known	chr21	+	786	6	FSM	ENSG00000243646.10	ENST00000422891.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	13.5262707351287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATGATGTTTTTGACA	4	True	NA	NA	False	NA	NA	NA	33266381	33296239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33266515_33268393_33268518_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_62468.known	chr21	+	6075	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	15.0253119767944	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	-23	True	NA	NA	False	AAGAAA	-42	NA	33324969	33359864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
transcript_6247.known	chr1	-	2395	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	51.227162933567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	0	True	NA	NA	False	AATAAA	-20	NA	143971986	143955286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
transcript_62472.known	chr21	+	1397	7	FSM	ENSG00000142166.13	ENST00000652513.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	65.8341772097813	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	-18	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33348549
transcript_62473.known	chr21	+	783	5	FSM	ENSG00000142166.13	ENST00000652654.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	80.2694680435843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGTTCCATTCCATAA	509	False	NA	NA	False	NA	NA	NA	33324903	33345358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343534_33343677_33345245
transcript_62474.known	chr21	+	1282	6	FSM	ENSG00000142166.13	ENST00000652601.1	1282	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	74.1404073363507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	-18	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33348549
transcript_62485.known	chr21	-	982	8	FSM	ENSG00000142188.17	ENST00000442441.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	86.0306067985252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGTTACATCATCTTG	17	True	NA	46	True	NA	NA	NA	33479936	33450546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33450864_33455726_33455785_33456003_33456098_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_62487.known	chr21	+	1699	7	FSM	ENSG00000159128.15	ENST00000290219.11	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	22.2442252181449	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	-16	True	NA	21	True	AATAAA	-27	NA	33403412	33437516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33403617_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_62488.known	chr21	-	2332	7	FSM	ENSG00000142188.17	ENST00000542230.7	2332	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	34.6538437823121	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATATTGTTGTTTGTT	-21	True	NA	-4	True	AATAAA	-17	NA	33479974	33449140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_62495.known	chr21	-	1485	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATAACTGAA	10	True	NA	NA	False	NA	NA	NA	33491716	33488054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33489425_33491601
transcript_62496.known	chr21	-	1625	2	FSM	ENSG00000177692.12	ENST00000314399.3	1625	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTTCCACTGACACT	253	False	NA	NA	False	ATTAAA	-35	NA	33491473	33488207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33489425_33491065
transcript_6250.known	chr1	-	1658	3	FSM	ENSG00000263513.6	ENST00000369175.4	1658	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	77	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAGGAAATAGAATAAATT	21	False	NA	NA	False	NA	NA	NA	143971965	143955877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_143956482_143968923_143969002_143970989
transcript_62502.known	chr21	-	3318	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_10	317.746515437325	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGTTTTCTTGGTCTT	-6	True	NA	-9	True	AATAGA	-43	NA	33542117	33503932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_62510.known	chr21	-	2149	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_10	94.1119014790372	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTTTTGATTTCTT	-3	True	NA	-4	True	AATAAA	-15	NA	33542114	33524008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_62513.known	chr21	+	5269	10	FSM	ENSG00000159140.21	ENST00000436227.5	5269	10	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_9	105.209843223489	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	2747	False	NA	15	True	AATAAA	-1	NA	33552247	33577481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576417
transcript_62515.known	chr21	-	806	6	FSM	ENSG00000159131.17	ENST00000476524.1	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_5	94.0693361303246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAAATGAAAAAATAATCG	7497	False	NA	NA	False	CATAAA	-44	NA	33542079	33531335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_62517.known	chr21	+	957	5	FSM	ENSG00000159140.21	ENST00000465834.5	957	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	336.799179779286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAACTCCCCTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	33572526	33576881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33572631_33573307_33573456_33575595_33575668_33575777_33575894_33576364
transcript_62519.nic	chr21	-	1420	5	ISM	ENSG00000159131.17	ENST00000476524.1	806	6	-66	239	-28	198	5prime_fragment	FALSE	canonical	3	1481	junction_4	98.404776306844	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCTTACAATCAGGAG	7431	False	NA	NA	False	TTTAAA	-13	NA	33542145	33531574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_62522.nic	chr21	+	1240	3	ISM	ENSG00000159140.21	ENST00000381679.8	7860	5	-859	9472	-832	2545	5prime_fragment	FALSE	canonical	3	1127	junction_2	49.5	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAGAAGAAAGAAA	121	False	NA	NA	False	CATAAA	-18	NA	33542205	33549584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_33543170_33546212_33546380_33549475
transcript_62523.known	chr21	+	5437	30	FSM	ENSG00000205726.15	ENST00000381291.8	5437	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	115.171381370553	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATGGAAATGTCTCTG	-16	True	NA	15	True	ATTAAA	-15	NA	33642477	33838494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33802429_33802445_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_62524.known	chr21	+	5191	27	FSM	ENSG00000205726.15	ENST00000399349.5	5191	27	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_23	76.100768216076	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAATGTCTCTGTG	4	True	NA	17	True	ATTAAA	-17	NA	33642497	33838496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_62527.nic	chr21	+	2268	17	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-82	42839	16	19375	5prime_fragment	FALSE	canonical	3	345	junction_12	38.2225698213765	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGCCCAAAGGTGAGT	NA	False	NA	29	True	AAAACA	-5	NA	33642415	33794454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340
transcript_62528.known	chr21	+	3913	29	FSM	ENSG00000205726.15	ENST00000399353.5	3913	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	88.1174063163367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTCCTCAAAGAGACC	NA	False	NA	NA	False	NA	NA	NA	33642399	33837018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750253_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_62533.nic	chr21	+	1612	12	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-82	64993	16	0	5prime_fragment	FALSE	canonical	3	382	junction_6	38.112491173775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATTGAGAGGCGA	NA	False	NA	NA	False	NA	NA	NA	33642415	33772300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060
transcript_62536.nic	chr21	+	1353	11	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-82	69484	16	-4473	5prime_fragment	FALSE	canonical	3	382	junction_6	36.9839154227889	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAGAAATTACCTGG	NA	False	NA	9	True	NA	NA	NA	33642415	33767809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712
transcript_62550.known	chr21	-	1482	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	98.9453763447287	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGTAACGTATTAATT	-5	True	NA	-27	True	GATAAA	-26	NA	33641747	33589466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_62563.nic	chr21	-	1963	12	NIC	ENSG00000205758.12	novel	2224	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	96.6435043970818	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTACGTAATTAGTAT	2171	False	NA	NA	False	NA	NA	NA	33641761	33594642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_62564.known	chr21	-	2558	12	FSM	ENSG00000205758.12	ENST00000420072.5	2558	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	119.008993340284	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1594	False	NA	NA	False	NA	NA	NA	33642338	33594661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599286_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_62578.nnic	chr21	-	1147	11	NIC	ENSG00000205758.12	novel	629	8	NA	NA	-2	110	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	99.9042041157428	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGATTTGGACATCA	2171	False	NA	-19	True	ATTAAA	-14	NA	33641761	33595951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_33596214_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_6258.known	chr1	+	2423	4	FSM	ENSG00000215784.6	ENST00000400889.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	46.8828326789242	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	-5	True	NA	NA	False	AATAAA	-20	NA	145095973	145112696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145097000_145098987_145099066_145103006_145103132_145111502
transcript_62581.known	chr21	-	627	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	129.777347792286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCTGGTTTTTGGAA	2210	False	NA	-18	True	AATAAA	-13	NA	33641722	33616286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_62584.known	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1938.44804323627	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	5	True	NA	-29	True	AATAAA	-18	NA	33915814	33903454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_62591.known	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	3758	junction_6	292.625281812005	2761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	15	False	33915819	-27	True	AATAAA	-20	NA	33915804	33903452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_62596.known	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1729.64789480403	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	58	False	NA	-27	True	AATAAA	-20	NA	33915761	33903452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
transcript_62604.known	chr21	+	9124	3	FSM	ENSG00000237945.8	ENST00000427447.5	9124	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAATGTCAGCCTGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	33931159	33977691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33931743_33945809_33945896_33969236
transcript_62606.known	chr21	+	728	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	33931162	33938372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_33931743_33938224
transcript_62607.known	chr21	-	591	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	0	1	0	-1	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTATTTGGTAATACG	NA	False	NA	-5	True	AATAAA	-18	NA	33968573	33967100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_33967351_33968232
transcript_62610.known	chr21	+	1061	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	566.922393277951	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	-8	True	NA	19	True	AATAAA	-19	NA	34073548	34143034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_62614.known	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	1362	junction_2	2.5	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	21	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34073746_34125340_34125481_34142407
transcript_62617.known	chr21	+	11566	2	FSM	ENSG00000198743.7	ENST00000381151.5	11566	2	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGTGACTAAGTATT	21	True	NA	12	True	AATAAA	-13	NA	34073577	34106260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34073746_34094862
transcript_62620.known	chr21	-	2643	3	FSM	ENSG00000225555.2	ENST00000440403.2	2643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAGTTCTATATAAAAA	NA	False	NA	NA	False	AAAACA	-16	NA	34375364	34353098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_34354888_34370434_34371161_34375236
transcript_62621.known	chr21	+	1220	5	FSM	ENSG00000205670.12	ENST00000481710.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	99.6857562543416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375479	34402777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710_34399900_34402090
transcript_62623.known	chr21	+	840	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	-4	True	NA	NA	False	AATAAA	-18	NA	34375506	34389151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
transcript_62625.known	chr21	-	2408	4	FSM	ENSG00000159200.18	ENST00000381132.6	2408	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	20.2868320729373	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATTTTATTTCTAGA	NA	False	NA	0	True	AATAAA	-28	NA	34526963	34516483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34526662
transcript_62627.known	chr21	+	2632	3	FSM	ENSG00000234380.2	ENST00000420877.1	2632	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATGGAGATAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	34745756	34784886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34746017_34782124_34782191_34782580
transcript_62628.known	chr21	+	767	2	FSM	ENSG00000234380.2	ENST00000419921.1	767	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGAAGGAGACGCATTT	14	True	NA	NA	False	ACTAAA	-10	NA	34745836	34748367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_34746017_34747780
transcript_62638.known	chr21	-	2991	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	72.6041002416587	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-27	True	NA	-7	True	ATTAAA	-17	NA	36060526	36034540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_62643.known	chr21	-	2761	11	FSM	ENSG00000185917.14	ENST00000481477.5	2761	11	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_7	87.7784142030374	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	170	False	NA	-7	True	ATTAAA	-17	NA	36060385	36034540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_62645.nic	chr21	-	3113	11	NIC	ENSG00000185917.14	novel	2991	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	57	junction_4	73.9380822039631	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-25	True	NA	-7	True	ATTAAA	-17	NA	36060524	36034540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_62649.nnic	chr21	-	1485	7	NNC	ENSG00000185917.14	novel	1212	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	100.150997110474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	315	False	NA	-9	True	AATAAA	-15	NA	36060240	36043685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36059788
transcript_62651.nic	chr21	-	1262	7	NIC	ENSG00000185917.14	novel	1165	7	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	96.2157587000291	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	-11	True	NA	-9	True	AATAAA	-15	NA	36060510	36043685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060281
transcript_62652.nic	chr21	-	1287	7	ISM	ENSG00000185917.14	ENST00000332131.9	2991	12	-74	9145	-74	0	5prime_fragment	FALSE	canonical	3	229	junction_2	29.3394879906851	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	NA	False	NA	-9	True	AATAAA	-15	NA	36060600	36043685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_62654.known	chr21	-	1165	7	FSM	ENSG00000185917.14	ENST00000399208.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	101.944020586464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	191	False	NA	-9	True	AATAAA	-15	NA	36060364	36043685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060281
transcript_62655.nic	chr21	-	1527	7	NIC	ENSG00000185917.14	novel	1165	7	NA	NA	-265	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	87.6820328738385	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	NA	False	NA	-9	True	AATAAA	-15	NA	36060791	36043685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
transcript_62661.known	chr21	+	1208	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	31	True	NA	31	True	AATAAA	-17	NA	36070023	36073164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36070405_36070949_36071058_36072445
transcript_62662.nnic	chr21	+	521	2	FSM	ENSG00000233393.2	ENST00000685204.1	502	2	-19	0	-8	0	multi-exon	FALSE	canonical	3	46	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATCTATCTTTTCCTTT	0	True	NA	16	True	ATTAAA	-16	NA	36104872	36107851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36105124_36107581
transcript_62663.known	chr21	+	2336	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTGTCTGAGGAGTT	8	False	NA	12	True	AGTAAA	-15	NA	36104880	36109690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36105124_36107597
transcript_62664.known	chr21	-	1160	7	FSM	ENSG00000185917.14	ENST00000399207.5	1160	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	102.661931708994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAAACCTTAAGACTGA	310	False	NA	-21	True	AATAAA	-3	NA	36060245	36043697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060106
transcript_62666.known	chr21	+	4224	17	FSM	ENSG00000159256.13	ENST00000400485.6	4224	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	22.1016826282525	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAAATGCTACTTTTA	-25	True	NA	15	True	AATAAA	-22	NA	36320196	36376632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_62668.known	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_11	29.1086517974889	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	-10	True	NA	16	True	AATAAA	-17	NA	36385391	36419015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_6267.nnic	chr1	-	1128	3	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	76	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	955	False	NA	NA	False	AATAAA	-19	NA	145215982	145164098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_145164639_145170941_145171186_145215638
transcript_62671.nnic	chr21	+	2188	13	NNC	ENSG00000159259.8	novel	4466	14	NA	NA	-26	-2188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	95.9251733847215	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTTTTCTGATT	NA	False	NA	25	True	ATTAAA	-13	NA	36385365	36416827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36409512_36409559_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_62674.nic	chr21	+	2142	12	NIC	ENSG00000159259.8	novel	4466	14	NA	NA	-26	-2188	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	74.195185961319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTTTTCTGATT	NA	False	NA	25	True	ATTAAA	-13	NA	36385365	36416827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_6268.known	chr1	-	1015	3	FSM	ENSG00000272419.6	ENST00000621798.4	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	879	False	NA	NA	False	AATAAA	-19	NA	145216058	145164098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145164639_145214676_145214732_145215638
transcript_62681.known	chr21	+	2005	4	FSM	ENSG00000183145.9	ENST00000485272.5	2005	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	33.7934904974316	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTGATAATCACCCT	NA	False	NA	14	True	AATAAA	-11	NA	37006149	37019659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_37006234_37008156_37008224_37013550_37013619_37017873
transcript_62682.nic	chr21	-	1069	6	NIC	ENSG00000185808.14	novel	972	6	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	80.3218525682768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	183	False	37073148	-4	True	AATAAA	-21	NA	37073115	37065373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072847
transcript_62683.known	chr21	-	972	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	70.7926549862343	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	128	False	NA	-4	True	AATAAA	-21	NA	37073170	37065373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
transcript_62687.known	chr21	-	688	5	FSM	ENSG00000185808.14	ENST00000399102.5	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	71.7160198282085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	398	False	NA	-4	True	AATAAA	-21	NA	37072900	37065373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072847
transcript_62688.known	chr21	-	707	5	FSM	ENSG00000185808.14	ENST00000360525.9	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	37.49249924985	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-2	True	NA	-4	True	AATAAA	-21	NA	37073071	37065373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072999
transcript_62689.nnic	chr21	-	758	5	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	77.2378631242476	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-1	True	NA	-4	True	AATAAA	-21	NA	37073183	37065373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37073060
transcript_62692.nnic	chr21	-	987	4	NNC	ENSG00000185808.14	novel	3437	4	NA	NA	-13	-1733	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	49.6185449202211	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGGCTGACTTCACTC	-1	True	NA	NA	False	AATAAA	-24	NA	37073183	37071284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_37071818_37072144_37072311_37072433_37072538_37072999
transcript_62693.known	chr21	+	3771	33	FSM	ENSG00000182670.13	ENST00000418766.5	3771	33	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	117.609506817051	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAGAAGAAAAA	-17	True	NA	NA	False	NA	NA	NA	37073250	37165751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_37073474_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549
transcript_62698.known	chr21	-	3056	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.7947664627449	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCTTTCCTTAGAG	-1	True	NA	NA	False	AATAAA	-20	NA	37267334	37223421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_627.known	chr1	+	2268	13	FSM	ENSG00000142657.21	ENST00000270776.13	2268	13	0	0	0	0	multi-exon	FALSE	canonical	3	1198	junction_9	123.89847994763	2033	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCTGATTTATTTCC	-4	True	NA	21	True	ATTAAA	-18	NA	10399063	10420511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10399126_10399628_10399705_10400392_10400573_10403070_10403137_10404160_10404280_10408070_10408141_10411417_10411553_10413061_10413252_10416986_10417118_10417375_10417510_10418825_10418926_10419416_10419540_10419629
transcript_6270.nnic	chr1	-	954	2	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	885	False	NA	NA	False	AATAAA	-19	NA	145216052	145164098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_145164639_145215638
transcript_62705.known	chr21	-	937	7	FSM	ENSG00000157538.14	ENST00000476950.5	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	129.90605579931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGCCAGCGGCATAT	-13	True	NA	-106	True	NA	NA	NA	37267346	37225471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37238459_37238610_37240495_37240640_37267237
transcript_62708.known	chr21	-	821	5	FSM	ENSG00000157538.14	ENST00000399001.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	161.258139329461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCACAGAAAACATTG	-18	True	NA	-26	True	NA	NA	NA	37267351	37225298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37267237
transcript_6271.known	chr1	-	143	2	FSM	ENSG00000272419.6	ENST00000638217.1	143	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATGGGTGTAGAGTT	1211	False	NA	NA	False	NA	NA	NA	145215726	145214676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145214732_145215638
transcript_62714.known	chr21	-	959	2	FSM	ENSG00000157538.14	ENST00000498789.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTATTCCTGGGCCTG	-7	True	NA	-15	True	ATTAAA	-18	NA	37267340	37261081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_37261938_37267237
transcript_62719.known	chr21	-	1754	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_3	75.6651982236366	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCACAAACTGAACTGCA	-21	True	NA	NA	False	NA	NA	NA	39183451	39174768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
transcript_6272.known	chr1	-	164	1	FSM	ENSG00000270722.1	ENST00000605806.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	145465780	145465616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145465600_145465800
transcript_62723.known	chr21	-	760	6	FSM	ENSG00000183527.12	ENST00000431628.1	760	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_5	328.815814704828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	1	True	NA	NA	False	AAGAAA	-43	NA	39183385	39175589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39183251
transcript_62724.known	chr21	-	907	6	FSM	ENSG00000183527.12	ENST00000380900.2	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	336.843821377207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-8	True	NA	NA	False	AAGAAA	-43	NA	39183488	39175589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39180284_39180437_39181771_39181879_39183251
transcript_62730.known	chr21	-	1552	8	FSM	ENSG00000205581.11	ENST00000431390.5	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2488.21822161308	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	242	False	NA	-2	True	AATAAA	-19	NA	39349140	39342314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_62733.known	chr21	-	745	7	FSM	ENSG00000205581.11	ENST00000485550.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2575.40051362027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGTACAACCAGAAAATA	-1	True	NA	NA	False	NA	NA	NA	39348597	39342908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347484_39348291_39348340_39348421_39348452_39348544
transcript_62738.known	chr21	-	793	7	FSM	ENSG00000205581.11	ENST00000482192.5	793	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	2649.71115826277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATACAAAGCATATTAA	-2	True	NA	-65	True	NA	NA	NA	39348623	39342803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39347246_39347293_39347378_39347484_39348291_39348340_39348421_39348452_39348544
transcript_62739.known	chr21	-	1045	7	FSM	ENSG00000205581.11	ENST00000436324.5	1045	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	2312.40743358278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTAACATCTTTGTGG	-1	True	NA	93	True	AAGAAA	-42	NA	39349088	39342645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39347378_39347484_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_62740.known	chr21	-	1014	6	FSM	ENSG00000205581.11	ENST00000489072.5	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	2468.22490061177	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAGCATATTAAATGG	520	False	NA	-61	True	NA	NA	NA	39348862	39342799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39348291_39348340_39348421_39348452_39348544
transcript_62747.known	chr21	-	1271	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	4780	junction_5	464.507653327693	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-1	True	NA	-2	True	AATAAA	-19	NA	39349088	39342314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_62749.nic	chr21	-	1180	5	ISM	ENSG00000205581.11	ENST00000380749.10	1271	6	416	0	-49	0	3prime_fragment	FALSE	canonical	3	4832	junction_4	450.17885334609	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	710	False	NA	-2	True	AATAAA	-19	NA	39348672	39342314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544
transcript_62750.known	chr21	-	4299	5	FSM	ENSG00000205581.11	ENST00000486741.5	4299	5	0	0	0	0	multi-exon	FALSE	canonical	3	4780	junction_4	512.594137695702	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-12	True	NA	-2	True	AATAAA	-19	NA	39349099	39342314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39343160_39345145_39348340_39348421_39348452_39348544_39348578_39348902
transcript_62755.nnic	chr21	+	1236	4	NIC	ENSG00000182093.16	novel	1534	5	NA	NA	-16	-53	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	189.415475139235	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAACCAATAACCTGTGT	-28	True	NA	3	True	AAAACA	-22	NA	39380309	39397690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_39380487_39390697_39390864_39391768_39391837_39396865
transcript_6276.known	chr1	+	1644	15	FSM	ENSG00000117262.19	ENST00000534502.5	1644	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.8620436729008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCAGGTGATACTATGAC	32	False	NA	NA	False	NA	NA	NA	145608047	145670184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145608176_145612201_145612248_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_62760.known	chr21	+	1534	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	97.8554418517437	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	-12	True	NA	16	True	AGTAAA	-18	NA	39380325	39397889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_62764.known	chr21	+	699	5	FSM	ENSG00000182093.16	ENST00000398753.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	214.337350921392	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGTCATTGAGCCAAG	-15	True	NA	NA	False	NA	NA	NA	39380457	39397116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39380557_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_62774.known	chr21	+	1464	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	143.678460459458	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	-15	True	NA	16	True	AGTAAA	-18	NA	39387764	39397889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_62778.known	chr21	+	1416	5	FSM	ENSG00000182093.16	ENST00000466787.1	1416	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	215.880030340928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATTGCCAACTGGAAA	11	True	NA	NA	False	NA	NA	NA	39387790	39397254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39387856_39390697_39391477_39391768_39391837_39393165_39393281_39396865
transcript_62781.known	chr21	+	1014	7	FSM	ENSG00000185437.15	ENST00000380637.7	1014	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	38.1779459315919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	15	True	NA	20	True	AATAAA	-17	NA	39445854	39515506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39445930_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62782.known	chr21	+	780	7	FSM	ENSG00000185437.15	ENST00000380631.5	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	37.4477413649119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTACATGGAGGTATCT	102	False	NA	NA	False	NA	NA	NA	39445941	39515207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39446082_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62784.known	chr21	+	1109	7	FSM	ENSG00000185437.15	ENST00000333634.10	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	13.6341075574784	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	0	True	NA	18	True	AATAAA	-15	NA	39451969	39515504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_62785.known	chr21	+	865	6	FSM	ENSG00000185437.15	ENST00000452550.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	36.05329388558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	38	False	NA	20	True	AATAAA	-17	NA	39452122	39515506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39508997_39509028_39511679_39511810_39515087
transcript_62786.known	chr21	-	3846	4	FSM	ENSG00000184809.13	ENST00000670049.1	3846	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	80.0291613517639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGAGGCCTCTCCA	10	True	NA	NA	False	NA	NA	NA	39612857	39597202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39600280_39601418_39601544_39609582_39609666_39612296
transcript_62787.known	chr21	-	1071	3	FSM	ENSG00000184809.13	ENST00000380612.8	1071	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	84.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	826	False	NA	NA	False	ATTAAA	-18	NA	39612441	39597146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39597990_39609582_39609666_39612296
transcript_62788.nic	chr21	-	1996	3	ISM	ENSG00000184809.13	ENST00000489821.5	1919	4	-449	1723	16	-1709	5prime_fragment	FALSE	canonical	3	20	junction_1	84.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCGCATGTTTTCTTCG	426	False	NA	-4	True	AATAAA	-19	NA	39612841	39598911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_-_39600280_39609582_39609666_39612296
transcript_62790.known	chr21	-	1823	3	FSM	ENSG00000184809.13	ENST00000380604.8	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	84	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGCGCGGT	763	False	NA	NA	False	AATACA	-1	NA	39612504	39604470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39606003_39609582_39609666_39612296
transcript_62791.nnic	chr21	-	1713	3	NNC	ENSG00000184809.13	novel	4202	3	NA	NA	16	33	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	86	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAATGTTTGACATTTC	426	False	NA	-7	True	ATTAAA	-19	NA	39612841	39604100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_39605186_39609582_39609666_39612296
transcript_62792.known	chr21	-	4202	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	51.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	357	False	NA	NA	False	NA	NA	NA	39612910	39602842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39606348_39609582_39609666_39612296
transcript_62793.known	chr21	-	3106	3	FSM	ENSG00000184809.13	ENST00000329618.7	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	87.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTATTATTAAAGTTCT	-9	True	NA	-40	True	NA	NA	NA	39612876	39604133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_39606577_39609582_39609666_39612296
transcript_62799.known	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	6	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_39867511_39898475_39898528_39928983
transcript_62803.nic	chr21	+	1491	4	ISM	ENSG00000182240.16	ENST00000463674.5	1013	6	3604	-203	3604	203	3prime_fragment	FALSE	canonical	3	35	junction_1	4.10960933531265	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATTAAAAAAAAAACTTCA	3603	False	NA	-13	True	AAGAAA	-3	NA	41245348	41275827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_41246064_41250751_41250902_41257157_41257327_41275370
transcript_62804.known	chr21	+	1317	8	FSM	ENSG00000183844.17	ENST00000357985.7	1317	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.26778683805536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCACGTCTGGCACCGG	0	True	NA	NA	False	NA	NA	NA	41316800	41357727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41316899_41322922_41323067_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_62806.known	chr21	+	864	7	FSM	ENSG00000183844.17	ENST00000398647.7	864	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.40947204913349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGATGTGATTCAAGC	13	True	NA	94	True	ACTAAA	-20	NA	41316813	41357431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41316899_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_62808.known	chr21	+	2776	17	FSM	ENSG00000157601.15	ENST00000398598.8	2776	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.56195171219375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTCTGCCATGTTTTG	-1	True	NA	16	True	AATAAA	-16	NA	41426238	41459212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41426264_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_62809.known	chr21	+	3251	16	FSM	ENSG00000157601.15	ENST00000681849.1	3251	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.60241482509152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAAATTAGCTGGGT	3335	False	NA	NA	False	ACTAAA	-1	NA	41426089	41459637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41426264_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_62810.known	chr21	-	1877	14	FSM	ENSG00000184012.14	ENST00000458356.6	1877	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	26.0093292320389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCACTCTCTGCCATTC	-2	True	NA	-6	True	ATTAAA	-18	NA	41508158	41466008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507949
transcript_62811.known	chr21	-	3450	14	FSM	ENSG00000184012.14	ENST00000332149.10	3450	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_13	29.8530919770753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-2	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_62813.known	chr21	-	1427	13	FSM	ENSG00000184012.14	ENST00000424093.6	1427	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	38.5856730752059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACATGGTCTTCGTCCTT	3	True	NA	NA	False	AAGAAA	-45	NA	41508092	41466141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_62819.known	chr21	+	2777	17	FSM	ENSG00000157601.15	ENST00000288383.11	2777	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	4.65320789885859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTAGCAGACACTGCT	-8	True	NA	3	True	AATAAA	-3	NA	41426200	41459199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_41426264_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451190_41451244_41452620_41452870_41458527
transcript_6282.known	chr1	+	1955	14	FSM	ENSG00000117262.19	ENST00000460277.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	70.5805176196351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	2	True	NA	NA	False	ATTAAA	-16	NA	145607989	145670463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623592_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_62822.nnic	chr21	-	1408	5	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-582	59	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	44.4992977472679	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714637	41711460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_41712045_41712815_41713001_41713550_41713673_41714019_41714133_41714233
transcript_62823.nnic	chr21	-	1672	5	NNC	ENSG00000236384.7	novel	718	7	NA	NA	-582	59	intron_retention	FALSE	canonical	3	39	junction_1	38.0197317192008	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714637	41711460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_41712045_41712815_41713001_41713550_41713937_41714019_41714133_41714233
transcript_62824.nic	chr21	-	1737	5	NIC	ENSG00000236384.7	novel	2033	6	NA	NA	-582	59	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	44.1163235095582	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714637	41711460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_41712374_41712815_41713001_41713550_41713673_41714019_41714133_41714233
transcript_62825.nic	chr21	-	2001	5	NIC	ENSG00000236384.7	novel	718	7	NA	NA	-582	59	intron_retention	FALSE	canonical	3	42	junction_1	37.4257598453258	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714637	41711460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_41712374_41712815_41713001_41713550_41713937_41714019_41714133_41714233
transcript_62828.nnic	chr21	-	1286	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-582	59	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	41.3628926562068	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714637	41711460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_-_41712045_41712815_41713001_41714019_41714133_41714233
transcript_62829.nnic	chr21	-	1615	4	NIC	ENSG00000236384.7	novel	560	4	NA	NA	-582	59	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	40.4749579644281	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714637	41711460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_41712374_41712815_41713001_41714019_41714133_41714233
transcript_62830.nic	chr21	-	1451	2	NIC	ENSG00000236384.7	novel	718	7	NA	NA	-582	-230	intron_retention	FALSE	canonical	3	134	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAGACAAAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	41714637	41713085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_41714133_41714233
transcript_62831.known	chr21	-	867	3	FSM	ENSG00000160180.17	ENST00000518498.3	867	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGTATTTGTTTGCT	-1	True	NA	NA	False	AGTAAA	-20	NA	42315409	42311666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42312270_42313484_42313632_42315292
transcript_62832.known	chr21	-	419	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTGAGGTTGTGCTT	-7	True	NA	-5	True	AATAAA	-40	NA	42313686	42312052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42312270_42313484
transcript_62833.known	chr21	-	492	3	FSM	ENSG00000160182.3	ENST00000291527.3	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCTGTTCATTCTTTT	-2	True	NA	-1	True	ATTAAA	-16	NA	42366535	42362281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42362496_42363254_42363408_42366410
transcript_62835.known	chr21	+	3712	20	FSM	ENSG00000160190.14	ENST00000352133.3	3712	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	50.205781525786	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	-18	True	NA	6	True	AATAAA	-19	NA	42513851	42581426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_62837.nic	chr21	+	2929	20	NIC	ENSG00000160190.14	novel	481	5	NA	NA	329	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	48.8696610108257	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	-12	True	NA	6	True	AATAAA	-19	NA	42514852	42581426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_62838.known	chr21	-	1300	9	FSM	ENSG00000160188.10	ENST00000291536.8	1300	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.84032319311183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTGCTTCAAGTTCT	3	True	NA	3	True	AATAAA	-28	NA	42496224	42472485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42472871_42475897_42476048_42477290_42477445_42482636_42482709_42485668_42485805_42486370_42486462_42492757_42492864_42492965_42493080_42496132
transcript_62839.known	chr21	-	937	8	FSM	ENSG00000160188.10	ENST00000398352.3	937	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	5.42481072744215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGGCAGTTGCAGTG	1063	False	NA	NA	False	NA	NA	NA	42496186	42472696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42472871_42475897_42476048_42477290_42477445_42482636_42482709_42485668_42485805_42486370_42486462_42492757_42492864_42496132
transcript_62841.known	chr21	+	2192	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	46.9269485919884	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	11	True	NA	21	True	AATATA	-15	NA	42653620	42775509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62844.known	chr21	+	1883	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	46.3276042287991	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	140	False	NA	21	True	AATATA	-15	NA	42653749	42775509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62847.known	chr21	+	1783	18	FSM	ENSG00000160191.18	ENST00000398234.7	1783	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	72.3980251694955	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62849.known	chr21	+	1885	18	FSM	ENSG00000160191.18	ENST00000398232.7	1885	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6687187543458	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62850.known	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	66.5708914898246	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	1	True	NA	21	True	AATATA	-15	NA	42653812	42775509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_62852.nnic	chr21	+	898	5	NNC	ENSG00000160191.18	novel	794	5	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	81.3111308493493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATTTCATGTATTTAA	135	False	NA	13	True	AATAAA	-15	NA	42653744	42701193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700627
transcript_62853.known	chr21	+	794	5	FSM	ENSG00000160191.18	ENST00000486902.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	81.7324140105992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	-1	True	NA	9	True	AATAAA	-11	NA	42653778	42701189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700693
transcript_62859.known	chr21	-	1471	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	42.7274661504326	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	13	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_6286.known	chr1	+	2124	14	FSM	ENSG00000117262.19	ENST00000313835.14	2124	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	26.8771036055757	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGGTATGTCATTTT	0	True	NA	NA	False	AATAGA	-16	NA	145607987	145670650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_62862.known	chr21	-	2106	11	FSM	ENSG00000160193.12	ENST00000398208.3	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	37.9204430353866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	5	True	NA	-2	True	AATATA	-14	NA	42879539	42849225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_62865.nnic	chr21	-	1249	10	NIC	ENSG00000160193.12	novel	1471	12	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_7	83.0675762390009	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	-1	True	NA	-28	True	AGTAAA	-15	NA	42879579	42843093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42873550_42873692_42876701_42876768_42879406
transcript_6287.nnic	chr1	+	1871	14	NNC	ENSG00000117262.19	novel	1955	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	76.5327017546736	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	-3	True	NA	NA	False	ATTAAA	-16	NA	145607984	145670463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623681_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_62871.known	chr21	+	5725	4	FSM	ENSG00000160194.18	ENST00000354250.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	352.193444320337	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATATGCTAGGCACTAT	2	True	NA	3	True	AATAAA	-17	NA	42893308	42913299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42893382_42896926_42897048_42903181_42904277_42908863
transcript_62875.known	chr21	+	4676	3	FSM	ENSG00000160194.18	ENST00000340344.4	4676	3	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_2	80.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAGGCACTATGCCTC	-4	True	NA	8	True	AATAAA	-22	NA	42893267	42913304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42893382_42896926_42897048_42908863
transcript_62879.known	chr21	-	2790	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	143	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTCATGTTGTCTGT	170	False	NA	-9	True	ATTAAA	-17	NA	42925646	42916802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_42919292_42925345
transcript_62881.known	chr21	+	5300	11	FSM	ENSG00000160199.15	ENST00000291547.10	5300	11	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	37.5201279315516	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	-20	True	NA	NA	False	NA	NA	NA	42974561	43033931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_62884.nic	chr21	+	1210	10	ISM	ENSG00000160199.15	ENST00000291547.10	5300	11	-45	5150	7	0	5prime_fragment	FALSE	canonical	3	179	junction_6	38.54578806793	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAGAACCGGCCAGTT	8080	False	NA	NA	False	AAGAAA	-5	NA	42974516	43028781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701
transcript_62885.known	chr21	+	5180	10	FSM	ENSG00000160199.15	ENST00000432907.6	5180	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	69.1366512293579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	8073	False	NA	NA	False	NA	NA	NA	42974509	43033931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_62886.known	chr21	+	1725	6	FSM	ENSG00000160199.15	ENST00000480179.1	1725	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	44.231210700138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	22	False	NA	NA	False	NA	NA	NA	42974661	43018051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907
transcript_62899.nic	chr21	-	2310	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	485.433676902706	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	9	True	NA	NA	False	TATAAA	-14	NA	43075864	43053190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_62902.nic	chr21	-	2566	18	NIC	ENSG00000160200.18	novel	2495	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_1	780.174508027389	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	9	True	NA	NA	False	TATAAA	-14	NA	43075864	43053190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_-_43053984_43056057_43056100_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_62919.known	chr21	-	2453	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_16	624.83389980358	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-5	True	NA	NA	False	TATAAA	-14	NA	43075831	43053190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
transcript_62921.known	chr21	-	2495	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_10	325.332137975946	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-9	True	NA	NA	False	TATAAA	-14	NA	43075835	43053190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_62945.known	chr21	-	966	9	FSM	ENSG00000160201.12	ENST00000464750.5	966	9	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_6	2061.585126638	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	20	True	NA	NA	False	AATAAA	-20	NA	43107524	43092955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43107450
transcript_62952.known	chr21	-	945	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	4090	junction_6	882.814469611312	2810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	24	False	43107594	NA	False	AATAAA	-20	NA	43107570	43092955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
transcript_62955.known	chr21	-	940	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	2282	junction_5	1691.04056843165	2609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-21	True	NA	NA	False	AATAAA	-20	NA	43107565	43092955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
transcript_62966.known	chr21	-	3973	3	FSM	ENSG00000160201.12	ENST00000496462.1	3973	3	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	1717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAAAGAGTTTTGAGCA	20	True	NA	NA	False	NA	NA	NA	43107524	43097621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43101433_43104314_43104403_43107450
transcript_62970.nic	chr21	+	1086	11	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-42	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_1	176.675861395947	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATGACCGAAACTTGA	-25	True	NA	-62	True	AAAACA	-17	NA	43728857	43756144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_62971.nic	chr21	+	1197	11	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	176.675861395947	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGTGATCTGAAAAC	-25	True	NA	25	True	NA	NA	NA	43728857	43756255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_62972.nic	chr21	+	924	10	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	144.041489221974	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATGACCGAAACTTGA	-8	True	NA	-62	True	AAAACA	-17	NA	43740994	43756144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_43741041_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_62975.known	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_2	2	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	14	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43774331_43774657_43774760_43776203
transcript_62976.known	chr21	-	1855	2	FSM	ENSG00000160213.9	ENST00000639959.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTCTGGTTTAAATA	348	False	NA	-6	True	AATAAA	-14	NA	43776238	43772510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43774331_43776203
transcript_62977.known	chr21	-	2354	2	FSM	ENSG00000160213.9	ENST00000640406.1	2354	2	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTAATGCTGTGGTCT	4	True	NA	-16	True	AATAAA	-4	NA	43776318	43772520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_43774760_43776203
transcript_62982.known	chr21	+	2958	13	FSM	ENSG00000160214.13	ENST00000497547.2	2958	13	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_12	36.387860460446	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCGTGTCTAACGTAA	22	True	NA	NA	False	NA	NA	NA	43789576	43805293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
transcript_62989.known	chr21	+	1584	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	241.03227077625	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	7	True	NA	NA	False	AATAAA	-17	NA	44133682	44145711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
transcript_62990.known	chr21	+	449	1	FSM	ENSG00000275799.1	ENST00000620163.1	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGTGGACAGTTCTGA	2967	False	NA	NA	False	AATAAA	-32	NA	44244544	44244993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44244500_44245000
transcript_62992.known	chr21	+	2907	22	FSM	ENSG00000141959.17	ENST00000349048.9	2907	22	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_12	61.8302481948499	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCCTGCAGAACTCCT	-17	True	NA	36	True	AATAAA	-37	NA	44300052	44327373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
transcript_62995.known	chr21	-	1283	7	FSM	ENSG00000160226.16	ENST00000325223.7	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	34.9650619269515	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-11	True	NA	-25	True	AATAAA	-17	NA	44339402	44329890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_62998.known	chr21	-	2221	7	FSM	ENSG00000160226.16	ENST00000339818.9	2221	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	22.5813344748858	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTCGTTTTAAATTGAG	1	True	NA	-1	True	AGTAAA	-19	NA	44339390	44328943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_6300.nic	chr1	-	1981	10	NIC	ENSG00000174827.14	novel	2065	9	NA	NA	-202	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.902024403926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGTATGCTTGATAG	640	False	NA	NA	False	AATAAA	-17	NA	145707602	145670985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_145671125_145671216_145671265_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
transcript_63003.nnic	chr21	+	1679	2	Fusion	ENSG00000228709.2_ENSG00000235890.2	novel	1856	2	NA	NA	-54	-8097	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTAAGTACTTTCTGTGT	-21	True	NA	5	True	ATTAAA	-16	NA	44485431	44507526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr21_+_44486231_44506646
transcript_63004.nnic	chr21	+	1516	2	NNC	ENSG00000228709.2	novel	1856	2	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTACGCACTCAGAAAAA	10	True	NA	12	True	AATAAA	-16	NA	44485462	44491141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr21_+_44486231_44490393
transcript_63005.known	chr21	+	912	2	FSM	ENSG00000228709.2	ENST00000449713.2	1856	2	91	853	91	-853	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGTAGAAGAGGGTG	8	False	NA	NA	False	TTTAAA	-16	NA	44485576	44490288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44486231_44490030
transcript_63006.known	chr21	-	721	7	FSM	ENSG00000184787.19	ENST00000330942.9	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	258.687982369151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGTACCAAACAAGGCA	4	True	NA	-62	True	NA	NA	NA	44801774	44771294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_6301.known	chr1	-	2065	9	FSM	ENSG00000174827.14	ENST00000417171.6	2065	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	27.1154937259125	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTATGCTTGATAGT	-4	True	NA	NA	False	AATAAA	-18	NA	145707368	145670984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145671490_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
transcript_63010.known	chr21	-	3367	6	FSM	ENSG00000184787.19	ENST00000345496.7	3367	6	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_2	50.9996078416295	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTTCTGTTTTGGT	2	True	NA	1	True	AATAAA	-24	NA	44801820	44768579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801705
transcript_63014.known	chr21	-	424	5	FSM	ENSG00000184787.19	ENST00000490450.5	424	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	284.091864543848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAATATTATCAGCCAC	5142	False	NA	NA	False	NA	NA	NA	44801768	44777253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_63015.known	chr21	-	933	4	FSM	ENSG00000184787.19	ENST00000497630.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	251.384168157026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTGGTTCCCTGTGG	3	True	NA	NA	False	NA	NA	NA	44801819	44770930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44801705
transcript_63018.known	chr21	-	762	4	FSM	ENSG00000184787.19	ENST00000462569.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	33.4896335536171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	-1	True	NA	NA	False	TATAAA	-19	NA	44801801	44776833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801705
transcript_63021.known	chr21	-	1512	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGTTTCCCCATC	-8	True	NA	NA	False	AATAAA	-18	NA	44801808	44799989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44801399_44801705
transcript_63022.known	chr21	-	1740	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_3	64.3238334954903	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	8	True	NA	-38	True	AGTAAA	-20	NA	44818062	44805616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
transcript_63024.known	chr21	-	1779	4	FSM	ENSG00000184900.16	ENST00000397898.7	1779	4	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	581.719481842886	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	19	True	NA	-38	True	AGTAAA	-20	NA	44818051	44805616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44807041_44808996_44809119_44813975_44814105_44817947
transcript_63025.known	chr21	-	2600	6	FSM	ENSG00000183255.12	ENST00000330938.8	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	16.6324983090334	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTAGTATGCTGCG	8	True	NA	-15	True	AATAAA	-16	NA	44873690	44849597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44851628_44855209_44855257_44856192_44856365_44861162_44861272_44865394_44865448_44873501
transcript_63026.known	chr21	-	2348	3	FSM	ENSG00000183250.13	ENST00000660377.2	2403	3	55	0	27	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCTGAAAATCTTGAAAT	-6	True	NA	NA	False	NA	NA	NA	44939886	44933306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_44935097_44935626_44935891_44939592
transcript_63028.known	chr21	+	880	6	FSM	ENSG00000160256.13	ENST00000397826.7	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	49.0469163148918	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGCTGGGCACACC	-8	True	NA	5	True	NA	NA	NA	44940011	44976989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_63029.known	chr21	+	443	1	FSM	ENSG00000276529.1	ENST00000616815.1	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGTCTGGTTGTGG	NA	False	NA	33	True	AATAAA	-36	NA	44978831	44979274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_44978800_44979300
transcript_63030.known	chr21	+	7540	3	FSM	ENSG00000223768.3	ENST00000400362.3	7540	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATACAACTATATATTACA	-12	True	NA	NA	False	TATAAA	-45	NA	45288049	45297806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_45288166_45289350_45289439_45290470
transcript_63031.known	chr21	+	389	3	FSM	ENSG00000223768.3	ENST00000454115.7	480	3	17	74	2	-74	multi-exon	FALSE	canonical	3	5	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCTCAGTCGGACACA	-10	True	NA	NA	False	NA	NA	NA	45288051	45290578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_45288245_45289350_45289439_45290470
transcript_63033.known	chr21	-	1884	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	90.8748590095192	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-1	True	NA	-6	True	ATTAAA	-15	NA	45542471	45514714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_63034.known	chr21	+	4203	35	FSM	ENSG00000142156.16	ENST00000361866.8	4203	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	158.657876575063	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTTATCTTCCCC	12	True	NA	22	True	AATAAA	-15	NA	45981769	46005048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46000768_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_63035.nic	chr21	+	1262	5	ISM	ENSG00000142173.16	ENST00000310645.9	3446	28	-11	15364	-4	1492	5prime_fragment	FALSE	canonical	3	402	junction_1	89.440972154824	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGCCACATTTAAG	-22	True	NA	NA	False	AAAAAG	-1	NA	46098107	46114441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007
transcript_63037.known	chr21	-	4886	22	FSM	ENSG00000160285.15	ENST00000397728.8	4886	22	0	0	0	0	multi-exon	TRUE	canonical	3	356	junction_21	67.2864051459158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	12	True	NA	-1	True	ATTAAA	-17	NA	46228774	46188445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_63038.known	chr21	-	2523	22	FSM	ENSG00000160285.15	ENST00000522411.5	2523	22	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_18	122.697256611733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTTCTGACCAATAGC	5	True	NA	NA	False	NA	NA	NA	46228781	46190782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222662_46222739_46227551_46227691_46228433_46228600_46228731
transcript_6304.nic	chr1	+	1811	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-20	12	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	44.7160920574337	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCGCAGAGTCTTCAAC	60	False	NA	28	True	AATAAA	-33	NA	145824155	145842505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_63042.known	chr21	+	2386	3	FSM	ENSG00000215424.10	ENST00000656253.1	2386	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAGACTTTCAGGAAA	3	True	NA	NA	False	AAAACA	-44	NA	46229223	46251745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46229267_46240836_46241020_46249585
transcript_63043.known	chr21	+	2193	2	FSM	ENSG00000215424.10	ENST00000444998.1	2193	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	19	False	NA	NA	False	GATAAA	-41	NA	46229239	46242999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46229267_46240833
transcript_63045.known	chr21	+	534	5	FSM	ENSG00000182362.14	ENST00000397694.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	83.6491930624558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	14	True	NA	9	True	AATAAA	-16	NA	46286383	46297723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46286989_46291333_46291463_46296161_46296231_46297538
transcript_63046.known	chr21	+	739	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	15.039531242695	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	-28	True	NA	37	True	AATAAA	-44	NA	46286341	46297751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_63047.known	chr21	+	764	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	83.3407913329361	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	3	True	NA	37	True	AATAAA	-44	NA	46286644	46297751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_63049.nic	chr21	+	582	4	NIC	ENSG00000182362.14	novel	739	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	82.9015480354056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	-28	True	NA	9	True	AATAAA	-16	NA	46286341	46297723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_46286416_46286869_46287124_46296161_46296231_46297538
transcript_6305.nic	chr1	+	2025	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-5	265	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	44.7160920574337	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATGCCTGTTCTTTAT	-12	True	NA	28	True	NA	NA	NA	145824194	145842758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_63051.known	chr21	+	890	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	78.6949101841338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	14	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
transcript_63052.known	chr21	+	912	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGAAAGGCTGGAGT	-15	True	NA	NA	False	NA	NA	NA	46286354	46291930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46287124_46291333
transcript_63053.known	chr21	+	1402	3	FSM	ENSG00000182362.14	ENST00000492864.1	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	82	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTTGTACTATTGACG	18	False	NA	NA	False	AAAACA	-16	NA	46286453	46292197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286738_46286869_46287124_46291333
transcript_63055.nic	chr21	+	568	2	ISM	ENSG00000182362.14	ENST00000492864.1	1402	3	-18	5062	-18	-4795	5prime_fragment	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTCTTCTTGTCTAGC	0	True	NA	56	True	NA	NA	NA	46286435	46287135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46286738_46286869
transcript_63056.known	chr21	+	433	4	FSM	ENSG00000182362.14	ENST00000397692.5	433	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	95.1361597337673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	14	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46286416_46286869_46286989_46296161_46296231_46297538
transcript_63057.nic	chr21	+	2360	14	ISM	ENSG00000160299.17	ENST00000359568.10	10526	47	-48	82205	-33	10238	5prime_fragment	FALSE	canonical	3	27	junction_1	5.88851052584758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAACGGACTGGAAA	-32	True	NA	NA	False	ACTAAA	-45	NA	46324107	46363564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479
transcript_63058.nic	chr21	+	1187	2	ISM	ENSG00000160299.17	ENST00000480896.5	10485	47	119233	0	3127	0	3prime_fragment	FALSE	canonical	3	200	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTGTTGTTTTTTTT	NA	False	NA	44	True	AATAAA	-28	NA	46444120	46445769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46444822_46445283
transcript_63059.known	chr21	+	1415	8	FSM	ENSG00000160299.17	ENST00000490468.5	1415	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	16.6770035971571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACAGCTGGAG	1	True	NA	NA	False	NA	NA	NA	46324140	46349800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346722_46346982_46347456_46347513_46349011_46349187_46349683
transcript_63060.known	chr21	-	1109	3	FSM	ENSG00000160307.10	ENST00000291700.9	1109	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGAGGCAGGTGGATCAC	-1	True	NA	NA	False	AATAAA	-18	NA	46605082	46598603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_-_46599504_46602277_46602417_46605012
transcript_63062.known	chr21	+	2354	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_11	175.811788922037	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	7	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_63064.known	chr21	+	2131	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	170.309277492449	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	8834	False	NA	24	True	AATAAA	-24	NA	46635614	46664951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_63066.known	chr21	+	1932	9	FSM	ENSG00000160310.19	ENST00000440086.5	1932	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	230.324736784827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	14	True	NA	NA	False	ATTAAA	-16	NA	46635680	46665124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46661799_46661937_46663382_46663555_46664294
transcript_63067.nic	chr21	+	1576	9	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-53	3854	6	0	5prime_fragment	FALSE	canonical	3	273	junction_1	173.783944525954	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	8840	False	NA	3	True	AATAAA	-16	NA	46635620	46661270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_63071.nic	chr21	+	1472	8	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	1	3681	1	0	5prime_fragment	FALSE	canonical	3	286	junction_7	140.175837097991	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	8835	False	NA	3	True	AATAAA	-16	NA	46635615	46661270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_63072.known	chr21	+	1874	8	FSM	ENSG00000160310.19	ENST00000458387.6	1874	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	237.042922144441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGGCTGGGTGCAGT	8814	False	NA	NA	False	ATTAAA	-9	NA	46635594	46665117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46663382_46663555_46664294
transcript_63076.nic	chr21	+	2362	8	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-53	4980	6	714	5prime_fragment	FALSE	canonical	3	273	junction_1	169.20148597794	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTACTGCTTTG	8840	False	NA	41	True	ATTAAA	-21	NA	46635620	46660144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_63081.nic	chr21	+	1156	7	NIC	ENSG00000160310.19	novel	1011	7	NA	NA	1	190	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	228.783558558448	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAACCACATTATGACGA	8835	False	NA	NA	False	AATAAA	-16	NA	46635615	46653142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46652844
transcript_63082.nic	chr21	+	1642	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	1	5423	1	98	5prime_fragment	FALSE	canonical	3	395	junction_6	105.107352528525	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAATTACCAATAAA	8835	False	NA	NA	False	NA	NA	NA	46635615	46659528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_63083.nic	chr21	+	2258	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	1	4807	1	714	5prime_fragment	FALSE	canonical	3	395	junction_6	105.107352528525	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTACTGCTTTG	8835	False	NA	41	True	ATTAAA	-21	NA	46635615	46660144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_63085.known	chr21	+	1011	7	FSM	ENSG00000160310.19	ENST00000291705.11	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	230.207454749455	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGGTCCTTCACAGAC	-25	True	NA	NA	False	NA	NA	NA	46635641	46664473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46664294
transcript_63086.nic	chr21	+	1111	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-53	15236	6	0	5prime_fragment	FALSE	canonical	3	273	junction_1	176.444514413644	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	8840	False	NA	32	True	NA	NA	NA	46635620	46649888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_63087.known	chr21	+	954	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	74.4215022691695	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	7	True	NA	37	True	NA	NA	NA	46635673	46649893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_6309.known	chr1	+	3777	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	17.607541287871	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	-7	True	NA	NA	False	AATAAA	-18	NA	145824199	145844402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_63094.nic	chr22	-	2246	8	NIC	ENSG00000069998.12	novel	1735	8	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_7	269.070357235533	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	200	False	NA	-11	True	AATAAA	-28	NA	17159057	17137521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17158456
transcript_63095.known	chr22	-	1799	8	FSM	ENSG00000069998.12	ENST00000336737.8	1799	8	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_7	106.005005657704	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGAAGCTCTGTCTG	-20	True	NA	-9	True	AATAAA	-30	NA	17159277	17137519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17159125
transcript_63103.known	chr22	-	3195	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	12.3153021346074	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	17199783	17179305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
transcript_63106.known	chr22	+	2186	11	FSM	ENSG00000182902.14	ENST00000327451.11	2186	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	15.3088209866077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGTCACTCTTCAAACT	3	True	NA	NA	False	ATTAAA	-18	NA	17563497	17590995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17563714_17569923_17569987_17579744_17579965_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_63107.nnic	chr22	+	1835	9	NNC	ENSG00000182902.14	novel	2454	4	NA	NA	10889	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	8.8140512819021	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	NA	False	NA	3	True	AATAAA	-12	NA	17580595	17590881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_17580858_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_63108.nnic	chr22	+	1716	8	NNC	ENSG00000182902.14	novel	2454	4	NA	NA	10889	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	13.3950950511212	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	NA	False	NA	3	True	AATAAA	-12	NA	17580595	17590881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_17580858_17581036_17581160_17581357_17581414_17582562_17582654_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_63109.known	chr22	+	2057	10	FSM	ENSG00000182902.14	ENST00000399813.1	2057	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.6969761969749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	6	True	NA	3	True	AATAAA	-12	NA	17563449	17590881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17563714_17579744_17579965_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_63112.known	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	37.3689376354212	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	12	True	NA	3	True	NA	NA	NA	17628749	17592135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_63114.known	chr22	-	994	8	FSM	ENSG00000131100.13	ENST00000399798.6	994	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	153.411544679064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGTTGCATGGGCT	12	True	NA	39	True	NA	NA	NA	17628749	17592408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17628602
transcript_63115.known	chr22	-	1208	8	FSM	ENSG00000131100.13	ENST00000399796.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	165.812040132981	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGATTTCTAGTGT	14	True	NA	-30	True	ATTAAA	-14	NA	17628747	17592168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_63118.known	chr22	+	4959	7	FSM	ENSG00000099968.18	ENST00000317582.10	4959	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_6	45.3336397048471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	8	True	NA	NA	False	NA	NA	NA	17638756	17730855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
transcript_63122.known	chr22	+	2112	6	FSM	ENSG00000099968.18	ENST00000493680.5	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	40.0869055927244	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATATTTTTTGAGC	23	False	NA	-31	True	AATAAA	-24	NA	17638771	17703733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
transcript_63124.known	chr22	+	2662	6	FSM	ENSG00000099968.18	ENST00000498133.5	2662	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	95.2063023123995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGTAGGAAAAAG	-8	True	NA	NA	False	AATAGA	-21	NA	17638740	17728699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17696140_17696211_17702242_17702387_17726676
transcript_63125.known	chr22	+	4961	6	FSM	ENSG00000099968.18	ENST00000618481.4	4961	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.7725222869182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
transcript_63126.nic	chr22	+	779	5	ISM	ENSG00000099968.18	ENST00000418951.6	5062	6	146	28427	-11	0	5prime_fragment	FALSE	canonical	3	26	junction_4	101.374306409465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTTTGTTGTTTTTCTT	-19	True	NA	NA	False	ATTAAA	-21	NA	17638729	17702428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17702242
transcript_63129.known	chr22	+	4905	5	FSM	ENSG00000099968.18	ENST00000337612.9	4905	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	102.831172316569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17702242_17702387_17726676
transcript_63132.nic	chr22	+	1309	4	ISM	ENSG00000099968.18	ENST00000493680.5	2112	6	-42	13875	-11	-2537	5prime_fragment	FALSE	canonical	3	236	junction_3	17.9876500843094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAAAACCGTTATAT	-19	True	NA	NA	False	NA	NA	NA	17638729	17689858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985
transcript_63134.known	chr22	-	2495	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	206.785879595295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	475	False	NA	0	True	AATAAA	-18	NA	17774016	17734137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
transcript_63135.known	chr22	-	2177	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	88.9966291496481	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-16	True	NA	0	True	AATAAA	-18	NA	17774469	17734137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
transcript_63138.known	chr22	-	700	6	FSM	ENSG00000015475.19	ENST00000551952.5	700	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	217.585477456562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCGATGTGGTCACAG	NA	False	NA	NA	False	NA	NA	NA	17774665	17735551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774639
transcript_63139.known	chr22	-	907	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	223.194281960807	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGCCTTCATAT	-4	True	NA	-39	True	AATATA	-27	NA	17774495	17735363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
transcript_63141.known	chr22	-	1988	5	FSM	ENSG00000015475.19	ENST00000614949.4	1988	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	238.445355375189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTTTTCATGTTTTGGA	-4	True	NA	-4	True	AATAAA	-14	NA	17774495	17734141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17750104_17750175_17774380
transcript_63142.known	chr22	-	1879	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	245.837796569653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGTTTGGAAATAAA	2	True	NA	-37	True	AAAAAG	-23	NA	17774489	17734174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
transcript_63145.nic	chr22	-	1499	7	NIC	ENSG00000243156.9	novel	9447	32	NA	NA	-1	5647	combination_of_known_junctions	TRUE	canonical	3	17	junction_3	3.1446603773522	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATTTGGTTTGTGGTTA	1	True	NA	NA	False	CATAAA	-18	NA	18001502	17899080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_17899549_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548_17906887_18001392
transcript_63146.known	chr22	+	2003	5	FSM	ENSG00000183785.16	ENST00000330423.8	2003	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTGTCAAGTGAGAGAA	-2	True	NA	NA	False	AATAAA	-19	NA	18110808	18131732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18110869_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_63147.known	chr22	+	1858	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	4.60434577328853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	-1	True	NA	NA	False	AATAAA	-17	NA	18150169	18177397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_6315.known	chr1	+	1590	12	FSM	ENSG00000186141.9	ENST00000369294.5	1590	12	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_11	66.6814308720239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGTGGGATAAGTCGC	-31	True	NA	16	True	AATAAA	-21	NA	145824175	145842493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145842338
transcript_63151.nnic	chr22	+	1482	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	14568	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	9.02151623076968	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	8382	False	NA	NA	False	AATAAA	-17	NA	18164737	18177397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18164921_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_63152.nnic	chr22	+	1360	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	15390	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	9.02151623076968	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	9204	False	NA	NA	False	AATAAA	-17	NA	18165559	18177397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18165621_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_63153.known	chr22	-	1787	4	FSM	ENSG00000274602.5	ENST00000619742.4	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	58.8104299139759	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGGAATCTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	18537865	18533656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649
transcript_63158.nnic	chr22	+	1347	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	19	16	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	11	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	2056	False	NA	22	True	NA	NA	NA	18939464	18947757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18939750_18945071_18945167_18946790
transcript_63159.nnic	chr22	+	1292	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	40	16	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	2077	False	NA	22	True	NA	NA	NA	18939485	18947757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_18939750_18945105_18945167_18946790
transcript_63161.known	chr22	+	1837	2	FSM	ENSG00000183628.14	ENST00000608842.1	1837	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	24	True	NA	NA	False	NA	NA	NA	18906352	18908269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_18906485_18906564
transcript_63162.nic	chr22	+	1215	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3075	0	40	0	3prime_fragment	FALSE	canonical	3	38	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	2077	False	NA	6	True	NA	NA	NA	18939485	18947741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_18939750_18946790
transcript_63163.known	chr22	-	4438	10	FSM	ENSG00000070413.20	ENST00000263196.12	4438	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	176.91184943111	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	1	True	NA	-5	True	AATAAA	-15	NA	19122412	19036285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_63164.nic	chr22	-	2981	9	ISM	ENSG00000070413.20	ENST00000263196.12	4438	10	-16	3409	-16	-1858	5prime_fragment	FALSE	non_canonical	0	0	junction_6	187.622584927828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCGAGTCGACTGCCTA	-15	True	NA	-26	True	AATAAA	-13	NA	19122428	19039694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_63165.nic	chr22	-	2109	2	ISM	ENSG00000070413.20	ENST00000263196.12	4438	10	-16	51397	-16	-30689	5prime_fragment	FALSE	canonical	3	585	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCAGGTGCAGTGGCT	-15	True	NA	NA	False	NA	NA	NA	19122428	19087682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_19089491_19122127
transcript_63166.known	chr22	-	2101	10	FSM	ENSG00000100056.12	ENST00000472073.1	2101	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	40.3129731286237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTGTCATTAAAGAACA	5758	False	NA	-37	True	NA	NA	NA	19144633	19133967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144056
transcript_63167.nic	chr22	-	2089	10	NIC	ENSG00000100056.12	novel	2101	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	41.1873167580554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGGGTTGCCTCTCCA	6	True	NA	-6	True	ATTAAA	-17	NA	19144657	19133936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144123
transcript_63168.known	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	15.2784848321236	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	12	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_6317.known	chr1	-	9135	9	FSM	ENSG00000265491.5	ENST00000582693.5	9135	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	15.0784407350362	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTCTCATTTTGTT	-11	True	NA	0	True	AATAAA	-18	NA	145824095	145738867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145746998_145747994_145748111_145750406_145750501_145751437_145751511_145752977_145753050_145771710_145771920_145784538_145784597_145788907_145788967_145823771
transcript_63172.known	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	575.608373809833	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	340	False	NA	-27	True	AATAAA	-4	NA	19178521	19175592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
transcript_63173.known	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_8	160.180367086606	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	0	True	NA	-15	True	AATAAA	-16	NA	19178736	19175580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
transcript_63180.known	chr22	+	744	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	45.38232646698	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	7	True	NA	26	True	AATAAA	-18	NA	19432544	19436075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
transcript_63181.known	chr22	+	954	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	180.342883296113	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGCTCCTTTGTC	41	False	NA	18	True	AATAAA	-10	NA	19432578	19436067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
transcript_63182.known	chr22	-	1005	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_2	10	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	13	True	NA	-37	True	AATAAA	-15	NA	19447692	19440885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19441695_19447377_19447546_19447664
transcript_63188.nic	chr22	-	931	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_9	283.967525529867	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	5	True	NA	-5	True	AATAAA	-17	NA	19479209	19450620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
transcript_63190.nic	chr22	-	813	9	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_8	299.205197147376	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	1	True	NA	-5	True	AATAAA	-17	NA	19479213	19450620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19479082
transcript_63191.known	chr22	+	2097	2	FSM	ENSG00000185065.6	ENST00000431090.1	2097	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTCTTCTGAGTGGTG	445	False	NA	NA	False	AATAAA	-19	NA	19447892	19450105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19448326_19448441
transcript_63192.known	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_11	63.568665288895	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-10	True	NA	-17	True	ATTAAA	-14	NA	19479193	19449910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_63193.known	chr22	-	1007	12	FSM	ENSG00000070010.19	ENST00000399523.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	256.690603871085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	11	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19450745_19454801_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_63195.known	chr22	+	2072	20	FSM	ENSG00000093009.11	ENST00000437685.6	2072	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	62.8666530561473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCTCTGGTCTCGAG	357	False	NA	25	True	AATAAA	-25	NA	19479825	19520611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19494506_19494603_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_63197.known	chr22	+	1879	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	24.9945673109524	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	-2	True	NA	22	True	AATAAA	-22	NA	19479919	19520608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_63203.known	chr22	+	1693	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	49.1922293917032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	16	True	NA	-8	True	NA	NA	NA	19479937	19520578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_63208.known	chr22	+	1519	16	FSM	ENSG00000093009.11	ENST00000672837.1	1519	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	69.5889518689729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCATTGTGGCTCTGGT	-6	True	NA	19	True	AATAAA	-19	NA	19479915	19520605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_63210.nic	chr22	+	1160	12	ISM	ENSG00000093009.11	ENST00000263201.7	1879	19	-47	12735	-28	2503	5prime_fragment	FALSE	canonical	3	183	junction_3	18.1931782692632	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCTGGATTTATCTT	404	False	NA	2	True	AATAAA	-15	NA	19479872	19507873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765
transcript_63219.nic	chr22	-	1606	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_7	34.7680359889743	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	11	True	NA	-8	True	AATAAA	-14	NA	19854870	19788414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
transcript_6322.known	chr1	-	2902	14	FSM	ENSG00000131788.16	ENST00000393045.7	2902	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_13	60.7170174911264	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-4	True	NA	-5	True	AATAAA	-15	NA	145859081	145848521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145858966
transcript_63220.nic	chr22	-	1591	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	49.9411899035214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	4	True	NA	-8	True	AATAAA	-14	NA	19854877	19788414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854681
transcript_63221.known	chr22	-	6642	8	FSM	ENSG00000185838.14	ENST00000329517.11	6642	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	16.1321076725635	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATAACAGCCATTCTG	7	True	NA	NA	False	AATAAA	-15	NA	19854874	19783222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
transcript_63223.nic	chr22	-	1370	7	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	51.4373945253408	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-8	True	AATAAA	-14	NA	19854920	19788414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19821227_19821376_19854442_19854540_19854819
transcript_63226.nic	chr22	-	1279	6	NIC	ENSG00000185838.14	novel	1197	6	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	3	35	junction_4	55.6826723496637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	17	True	NA	-8	True	AATAAA	-14	NA	19854817	19788414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854659
transcript_63227.nic	chr22	-	1224	6	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	48.8204875026868	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-8	True	AATAAA	-14	NA	19854922	19788414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854819
transcript_6323.nic	chr1	-	2947	14	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	12	0	intron_retention	FALSE	canonical	3	285	junction_7	23.6167626759033	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-29	True	NA	-5	True	AATAAA	-15	NA	145859824	145848521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145859664
transcript_63233.known	chr22	-	6653	3	FSM	ENSG00000215012.9	ENST00000328554.9	6653	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	7	True	NA	-7	True	AATAAA	-16	NA	19854874	19846145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19852487_19854442_19854540_19854659
transcript_63234.known	chr22	-	6523	3	FSM	ENSG00000215012.9	ENST00000407472.5	6523	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	45	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGCTTGTGTTTTCC	-15	True	NA	1	True	AATAAA	-24	NA	19854896	19846137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19852487_19854442_19854540_19854819
transcript_63238.known	chr22	-	730	3	FSM	ENSG00000215012.9	ENST00000416337.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGTGGACTTCTGCTG	18	True	NA	NA	False	NA	NA	NA	19854816	19851988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19852487_19854442_19854540_19854681
transcript_63241.known	chr22	-	6785	2	FSM	ENSG00000215012.9	ENST00000405640.1	6785	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-5	True	NA	-7	True	AATAAA	-16	NA	19854886	19846145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19852487_19854442
transcript_63243.known	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	17.3148940382422	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-9	True	NA	-8	True	AATAAA	-14	NA	19854843	19788414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
transcript_63244.known	chr22	-	1197	6	FSM	ENSG00000185838.14	ENST00000460402.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	66.9644681902276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTGCCAGCTGAG	75	False	NA	-57	True	NA	NA	NA	19854806	19788463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854681
transcript_63246.known	chr22	-	1941	18	FSM	ENSG00000184470.21	ENST00000400521.7	1941	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	23.9987023870662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-3	True	NA	-5	True	AATAAA	-19	NA	19941818	19875521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_63251.known	chr22	-	850	7	FSM	ENSG00000184470.21	ENST00000485358.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	22.6034658109474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCCCAGGCTCCTGGTGC	222	False	NA	NA	False	NA	NA	NA	19881164	19875640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881035
transcript_63252.known	chr22	-	1129	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	13.9164171634321	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	17	False	NA	-5	True	AATAAA	-19	NA	19881369	19875521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_63255.nic	chr22	-	1009	7	NIC	ENSG00000184470.21	novel	1129	7	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	21.3593591248011	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	68	False	NA	-5	True	AATAAA	-19	NA	19881318	19875521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_63256.known	chr22	-	4056	20	FSM	ENSG00000099889.14	ENST00000263207.8	4056	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	74.1805837316618	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	1	True	NA	-31	True	ATTAAA	-13	NA	20016823	19969895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19990584_19990813_20010454_20010509_20016588
transcript_63257.known	chr22	+	1405	6	FSM	ENSG00000093010.15	ENST00000676678.1	1405	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.370582175011	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	7710	False	NA	40	True	TATAAA	-34	NA	19941370	19969029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19941576_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_63259.known	chr22	+	2272	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	59.4191888197744	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTCTCAGTGTTTTT	-14	True	NA	NA	False	NA	NA	NA	19941771	19969975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_63260.known	chr22	-	2700	5	FSM	ENSG00000184470.21	ENST00000495655.2	2700	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.62807315119618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTGCTCTGCCTGCGGT	39	False	NA	-7	True	AATAAA	-17	NA	19881347	19875523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621
transcript_63261.known	chr22	+	909	4	FSM	ENSG00000093010.15	ENST00000677675.1	909	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	79.9291352803636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	516	False	NA	40	True	TATAAA	-34	NA	19963137	19969029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_19963227_19963565_19963760_19964167_19964300_19968535
transcript_63263.known	chr22	+	2084	8	FSM	ENSG00000183597.16	ENST00000432883.5	2084	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	24.2015347801392	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	4042	False	NA	26	True	AATAAA	-23	NA	20021068	20065925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_63266.known	chr22	+	4506	14	FSM	ENSG00000128191.16	ENST00000351989.8	4506	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	13.4714249409937	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	9	True	NA	14	True	CATAAA	-16	NA	20080240	20111872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
transcript_63268.known	chr22	-	2928	13	FSM	ENSG00000099899.15	ENST00000403707.7	2928	13	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_12	38.3905370284571	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	8937	False	NA	-10	True	AATAAA	-15	NA	20117392	20111874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882_20116973_20117096
transcript_6327.known	chr1	+	1473	8	FSM	ENSG00000186364.12	ENST00000334513.6	1473	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.91641053537726	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	10	True	NA	13	True	AATAAA	-22	NA	145845629	145848954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145845833_145846012_145846197_145846432_145846459_145846597_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_63272.known	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_1	3021.35320676018	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	0	True	NA	19	True	AATAAA	-21	NA	20116103	20127355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_63278.known	chr22	-	1172	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	41.9702275428666	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGGTAGGGCCCCCA	-20	True	NA	25	True	NA	NA	NA	20320060	20314237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
transcript_63281.known	chr22	-	935	4	FSM	ENSG00000128185.10	ENST00000443409.1	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	293.456413572215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGTTCTGGTCTCA	875	False	NA	NA	False	NA	NA	NA	20320080	20314393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20314825_20315335_20315477_20319638_20319800_20319878
transcript_63285.known	chr22	-	962	4	FSM	ENSG00000128185.10	ENST00000405465.3	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	301.626700851676	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAATGTGGCTTGTGTG	946	False	NA	-20	True	AATAAA	-15	NA	20320009	20314282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20314825_20315335_20315477_20319638_20319787_20319878
transcript_63286.nic	chr22	-	2532	7	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	12.8927197372091	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	27	False	NA	-7	True	AATAAA	-27	NA	20495831	20441518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489213_20495759
transcript_63287.known	chr22	-	2528	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	7.47774475805818	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	10	True	NA	-7	True	AATAAA	-27	NA	20495795	20441518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
transcript_63290.nnic	chr22	-	1397	4	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	17.9876500843094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-4	True	NA	-7	True	AATAAA	-27	NA	20495809	20441518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20495759
transcript_63291.known	chr22	+	3252	17	FSM	ENSG00000099917.17	ENST00000292733.11	3252	17	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_8	34.3599967258438	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTCCCCTTCTCCA	2	True	NA	40	True	AATAAA	-31	NA	20507601	20587632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_63292.known	chr22	+	788	6	FSM	ENSG00000226287.9	ENST00000452055.5	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.8063278467834	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	-21	True	NA	17	True	AATAAA	-17	NA	20702920	20704606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_63293.nic	chr22	+	672	5	ISM	ENSG00000226287.9	ENST00000452055.5	788	6	461	0	287	0	3prime_fragment	FALSE	canonical	3	52	junction_4	12.4699639133399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	440	False	NA	17	True	AATAAA	-17	NA	20703381	20704606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_63294.known	chr22	+	4259	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	17.2391270080593	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTAACCTCTTTTT	-1	True	NA	9	True	AATAAA	-19	NA	20859006	20891214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
transcript_63296.known	chr22	+	2309	20	FSM	ENSG00000183773.16	ENST00000399163.6	2309	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.50780688483192	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGACTCCCAGTGTA	-1	True	NA	4	True	ATTAAA	-18	NA	20965162	20981358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_20965208_20967804_20967976_20973306_20973521_20973757_20973868_20974062_20974173_20974251_20974297_20974524_20974622_20974703_20974817_20975691_20975779_20976214_20976307_20976407_20976539_20976650_20976767_20976866_20976939_20977031_20977096_20977699_20977777_20977887_20978006_20979270_20979370_20979626_20979703_20980019_20980125_20980991
transcript_63297.known	chr22	-	1144	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	67.8877750408717	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	NA	False	NA	-5	True	AATAAA	-13	NA	21002196	20999776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
transcript_63298.known	chr22	-	2316	5	FSM	ENSG00000099960.13	ENST00000382932.3	2316	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGGCATTCTTTGT	2	True	NA	NA	False	NA	NA	NA	21032561	21028717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21029231_21029335_21029445_21029710_21030352_21030830_21031853_21032530
transcript_63299.nnic	chr22	-	1221	4	NNC	ENSG00000184436.12	novel	1144	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	109.090176765219	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	-19	True	NA	-5	True	AATAAA	-13	NA	21001790	20999776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_21000433_21000646_21000788_21001255_21001412_21001522
transcript_6330.nic	chr1	-	1272	5	ISM	ENSG00000198483.13	ENST00000355594.9	3359	14	13077	0	13077	0	3prime_fragment	FALSE	canonical	3	91	junction_4	7.24568837309472	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCTGAGTGTAATTTTT	5601	False	NA	-5	True	AATAAA	-14	NA	145872789	145866563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_145866766_145867286_145867393_145867990_145868057_145868310_145868401_145871981
transcript_63302.known	chr22	-	1913	4	FSM	ENSG00000184436.12	ENST00000215742.9	1913	4	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_3	44.7908720859755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	-7	True	NA	NA	False	NA	NA	NA	21002118	20999103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831
transcript_63304.known	chr22	-	1080	4	FSM	ENSG00000184436.12	ENST00000466670.1	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	69.108610172684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCACCAGAGCGGCAG	-6	True	NA	NA	False	NA	NA	NA	21002117	21000229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21001412_21001831_21001912_21002085
transcript_63305.known	chr22	-	1678	4	FSM	ENSG00000161149.12	ENST00000292748.7	1678	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCCTACCGCCTTATA	-1	True	NA	NA	False	NA	NA	NA	21014292	21008636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21009454_21011383_21011591_21013041_21013185_21013781
transcript_63306.known	chr22	-	1671	3	FSM	ENSG00000184436.12	ENST00000476667.5	1671	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	51	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCATAATAAAGCGGATT	5	True	NA	-30	True	NA	NA	NA	21002106	20999801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646_21001412_21001831
transcript_63307.known	chr22	-	1974	3	FSM	ENSG00000161149.12	ENST00000422086.5	1974	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGCTGAGATAGCTTTA	4	True	NA	NA	False	AAAAAG	-27	NA	21014287	21008192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21009454_21011383_21011591_21013781
transcript_63308.known	chr22	+	1263	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	6	0	5	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGAATTGCTTCTATA	NA	False	NA	24	True	ATTAAA	-33	NA	21001921	21003272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21002830_21002917
transcript_63309.known	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-24	True	NA	-1	True	AATAAA	-17	NA	21001795	20999772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21000433_21000646
transcript_63310.known	chr22	+	1020	1	FSM	ENSG00000230513.3	ENST00000662660.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTTTTAAGAATTG	2	True	NA	16	True	ATTAAA	-25	NA	21002244	21003264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21002200_21003300
transcript_63314.known	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_1	195.254250202709	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	0	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
transcript_63319.known	chr22	+	2932	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1376	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	NA	False	NA	16	True	AATAAA	-18	NA	21567546	21624034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21567772_21610856_21611044_21621514
transcript_63324.known	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	64	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	-18	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21642524_21642861_21643059_21643893
transcript_63325.known	chr22	+	3235	22	FSM	ENSG00000100023.20	ENST00000679692.1	3235	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	68.7898637262346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTATAAATTACAAAAAAA	0	True	NA	NA	False	GATAAA	-9	NA	21666024	21698248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21685637_21685727_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
transcript_63329.known	chr22	+	4929	21	FSM	ENSG00000100023.20	ENST00000335025.12	4929	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	45.09819841191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAATTTAGAGTGTATC	-16	True	NA	NA	False	AATAAA	-20	NA	21666008	21700015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
transcript_63331.known	chr22	+	4068	20	FSM	ENSG00000100023.20	ENST00000398831.8	4068	20	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_19	26.8978780738434	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATTTTCAATTCTAAT	-13	True	NA	23	True	ATTAAA	-15	NA	21666011	21697907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_63332.known	chr22	+	1996	15	FSM	ENSG00000100023.20	ENST00000680463.1	1996	15	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_11	21.2287108243837	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGATAGTCACGCTTATC	-25	True	NA	NA	False	NA	NA	NA	21665999	21689606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731
transcript_63337.known	chr22	-	1487	8	FSM	ENSG00000100030.15	ENST00000398822.7	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	68.942448640078	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATATATTCTCCTAGG	474	False	NA	-17	True	ATTAAA	-14	NA	21867680	21769039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_63346.known	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_13	45.6548659181792	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-10	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_6335.known	chr1	+	1178	8	FSM	ENSG00000121851.13	ENST00000369314.2	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	14.0581881144486	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTGGGTGAGGCC	-1	True	NA	20	True	AATAAA	-16	NA	145964689	145978848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977083_145977153_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_63353.known	chr22	-	5149	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	16.6034174008773	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCCGAGTCCTGC	0	True	NA	-12	True	AATAAA	-15	NA	21952848	21919424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_63355.nic	chr22	-	1279	8	NIC	ENSG00000100034.14	novel	1778	7	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	56.3885934333155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	NA	False	NA	NA	False	AATAAA	-26	NA	21952872	21924875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_21925029_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_63358.known	chr22	-	5309	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTGTATTGTTTT	32	True	NA	NA	False	AATAAA	-18	NA	22508742	22484420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
transcript_63359.known	chr22	-	2148	2	FSM	ENSG00000169548.3	ENST00000302097.3	2148	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTGTCTTTGGCTTTT	0	True	NA	NA	False	AATAAA	-15	NA	22520270	22513735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_22515702_22520088
transcript_63361.known	chr22	-	2057	6	FSM	ENSG00000185686.18	ENST00000402697.5	2057	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.16619037896906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTAATCCCTGTGTAGA	-20	True	NA	-65	True	AATAGA	-45	NA	22559288	22547766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_22548644_22549725_22550335_22550766_22551090_22556811_22556910_22557544_22557581_22559174
transcript_63362.known	chr22	-	2758	5	FSM	ENSG00000185686.18	ENST00000543184.5	2758	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTGTAGTATA	-21	True	NA	0	True	AATAAA	-18	NA	22559289	22547701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_22548644_22549725_22550335_22550766_22551090_22556811_22557581_22559174
transcript_63363.known	chr22	-	1188	7	FSM	ENSG00000100218.12	ENST00000216036.9	1188	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.5723301886761	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGGTCCGAATGGCACT	2	True	NA	0	True	AATAAA	-18	NA	23141990	23059414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23059719_23061808_23061946_23063901_23064134_23134025_23134145_23138839_23138943_23140221_23140473_23141948
transcript_63368.known	chr22	+	1077	4	FSM	ENSG00000280623.1	ENST00000626825.1	1077	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	11.5854314646552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAACAGTGATTTTAG	23	False	NA	NA	False	AATGAA	-1	NA	23536898	23547167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23537137_23538760_23538839_23544227_23544307_23546485
transcript_6337.known	chr1	+	818	7	FSM	ENSG00000121851.13	ENST00000369313.7	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	35.7615560188436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAATAGAGGATGATGAC	12	True	NA	NA	False	NA	NA	NA	145964702	145978570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_63374.known	chr22	+	976	2	FSM	ENSG00000280623.1	ENST00000629869.1	976	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATCAAGTAGAAAGG	5	True	NA	19	True	NA	NA	NA	23536880	23539480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23537137_23538760
transcript_63392.known	chr22	-	3041	12	FSM	ENSG00000228315.12	ENST00000421064.5	3041	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.1547270670714	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCCTTGACCTCTTC	-1	True	NA	-5	True	NA	NA	NA	23717347	23653168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23653353_23659864_23660001_23683724_23683868_23686830_23686996_23690231_23690357_23694118_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717107
transcript_63393.known	chr22	-	567	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTGAGGGTCATAAG	-22	True	NA	-17	True	NA	NA	NA	23754425	23752742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23753199_23754314
transcript_63396.known	chr22	+	895	6	FSM	ENSG00000169314.15	ENST00000402217.8	895	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTTGGGTTATCTG	NA	False	NA	8	True	AATAAA	-15	NA	23762989	23765863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23763332_23764086_23764174_23764259_23764398_23764638_23764714_23764792_23764903_23765720
transcript_63397.known	chr22	+	681	6	FSM	ENSG00000169314.15	ENST00000305199.9	681	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.06939798987516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	NA	False	NA	6	True	AATAAA	-13	NA	23763206	23765861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23763332_23764086_23764174_23764259_23764403_23764638_23764714_23764792_23764903_23765720
transcript_63406.known	chr22	+	1730	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	0	0	0	0	multi-exon	TRUE	canonical	3	1419	junction_5	182.281333040441	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786930	23834540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_63409.known	chr22	-	1063	7	FSM	ENSG00000099958.15	ENST00000406855.7	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	21.4786715914493	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_63410.nnic	chr22	-	1205	7	NNC	ENSG00000099958.15	novel	3093	7	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	43.1431724996358	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	5	True	NA	-5	True	AAGAAA	-29	NA	23839101	23834502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_23834980_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_63412.known	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	25.0044440494529	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_63413.nic	chr22	-	1207	6	ISM	ENSG00000099958.15	ENST00000406855.7	1063	7	-26	0	-20	0	intron_retention	FALSE	canonical	3	68	junction_1	23.5082964078642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-4	True	NA	-5	True	AAGAAA	-29	NA	23839032	23834502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
transcript_63416.nnic	chr22	-	1254	6	NNC	ENSG00000099958.15	novel	3093	7	NA	NA	-20	0	intron_retention	FALSE	canonical	3	8	junction_1	46.8939228472091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-4	True	NA	-5	True	AAGAAA	-29	NA	23839032	23834502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_23834980_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
transcript_63419.known	chr22	-	969	6	FSM	ENSG00000099958.15	ENST00000476077.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	8.22192191643779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-12	True	NA	-30	True	AATAAA	-15	NA	23839012	23836733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_63420.nic	chr22	-	1006	6	ISM	ENSG00000099958.15	ENST00000318109.12	3093	7	-26	2231	-20	0	intron_retention	FALSE	canonical	3	58	junction_1	27.3320324893704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-4	True	NA	-30	True	AATAAA	-15	NA	23839032	23836733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
transcript_63421.nnic	chr22	-	857	6	NIC	ENSG00000099958.15	novel	3093	7	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	47.7660967632902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	5296	False	NA	-30	True	AATAAA	-15	NA	23839067	23836733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838894
transcript_63431.known	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	21305	junction_2	1533.5	2986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	-22	True	NA	20	True	AATAAA	-15	NA	23894382	23895223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23894583_23894771_23894945_23895039
transcript_63433.known	chr22	-	613	1	FSM	ENSG00000272973.1	ENST00000609825.1	613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTGAATTCTTGGGG	618	False	NA	-3	True	AATAAA	-16	NA	23857039	23856426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23856400_23857000
transcript_63434.known	chr22	+	435	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	21305	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	235	False	NA	24	True	AATAAA	-19	NA	23894697	23895227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23894945_23895039
transcript_63436.nnic	chr22	-	1264	7	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.5984067694222	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	9590	False	NA	NA	False	AATAAA	-26	NA	23961195	23957413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_23957933_23958284_23958459_23958550_23958702_23958911_23958964_23960293_23960382_23960690_23960795_23961019
transcript_63444.known	chr22	-	1108	5	FSM	ENSG00000133433.11	ENST00000290765.9	1108	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	16.2864974749023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	9590	False	NA	NA	False	AATAAA	-26	NA	23961195	23957413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23961019
transcript_63457.known	chr22	+	1582	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	248	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGATGCAATTATCAAT	-8	True	NA	NA	False	AATAAA	-18	NA	23966887	23972556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_23967023_23967385_23967562_23971285
transcript_6346.known	chr1	-	796	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	972.490699184316	1718	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGAACTCTATGTAT	8835	False	NA	70	True	NA	NA	NA	145927460	145925641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
transcript_63462.known	chr22	-	333	2	FSM	ENSG00000099977.15	ENST00000428792.1	333	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	6751	False	NA	-18	True	AATAAA	-24	NA	23973183	23971369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23971624_23973104
transcript_63463.known	chr22	-	565	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	53	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	5493	False	NA	-18	True	AATAAA	-24	NA	23974441	23971369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_23971624_23973767_23973944_23974306
transcript_63467.known	chr22	+	7233	37	FSM	ENSG00000099991.18	ENST00000263119.10	7233	37	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_25	9.59307073740413	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	-4	True	NA	13	True	AATAAA	-13	NA	24011303	24178628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
transcript_63469.nic	chr22	+	1652	10	ISM	ENSG00000099991.18	ENST00000398319.6	7480	37	-61	122324	9	0	5prime_fragment	FALSE	canonical	3	18	junction_4	9.41629792788369	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	6	True	NA	NA	False	NA	NA	NA	24011356	24056304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_63471.known	chr22	+	1321	9	FSM	ENSG00000099991.18	ENST00000454754.5	1321	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	12.3129758791285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	1515	False	NA	NA	False	NA	NA	NA	24011191	24056304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_63473.known	chr22	+	1472	9	FSM	ENSG00000099991.18	ENST00000445422.5	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	11.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTTCCAGGAGCTTC	-13	True	NA	NA	False	AAAAAG	-8	NA	24011415	24056318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_63474.known	chr22	+	3172	15	FSM	ENSG00000099994.11	ENST00000358321.4	3172	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	3.63444406663101	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTCCTGGTGTTCAT	0	True	NA	12	True	AAAACA	-18	NA	24181486	24189106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24181596_24183056_24183268_24183494_24183647_24184135_24184304_24184765_24184941_24185093_24185296_24185485_24185572_24185660_24185930_24186015_24186160_24186256_24186416_24187201_24187451_24187570_24187844_24187958_24188136_24188224_24188328_24188411
transcript_63476.known	chr22	+	6674	16	FSM	ENSG00000100014.20	ENST00000437398.5	6674	16	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	26.0856708217792	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTTTGTTGGTTTTT	-35	True	NA	27	True	GATAAA	-16	NA	24270816	24417739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
transcript_63484.known	chr22	+	6204	20	FSM	ENSG00000258555.6	ENST00000358654.2	6204	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	112.970885862826	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	46	True	NA	29	True	AATAAA	-36	NA	24270897	24442356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24343481_24343604_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533_24414745_24433130_24433737_24440582
transcript_63486.known	chr22	-	1606	6	FSM	ENSG00000138867.17	ENST00000404664.7	1606	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	67.5822461893654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGAGCCCTGGCCG	-4	True	NA	NA	False	NA	NA	NA	24555935	24542397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
transcript_63488.known	chr22	-	3584	6	FSM	ENSG00000138867.17	ENST00000621833.4	3584	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	93.7571330619703	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCTTTATGAAGCTGT	-4	True	NA	8	True	AATAAA	-35	NA	24555935	24540422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_24543101_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
transcript_63511.known	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	39.1606378338703	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	2	True	NA	18	True	ATTAAA	-14	NA	24555998	24574971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
transcript_63512.nnic	chr22	+	1153	4	NNC	ENSG00000100028.12	novel	3466	4	NA	NA	-497	-2837	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	1060.2906310169	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTCTTT	20	True	NA	-15	True	AATAAA	-20	NA	24555460	24572134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_24556058_24557656_24557801_24567983_24568177_24571915
transcript_63517.known	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	16	True	NA	-1	True	AATAAA	-22	NA	24696003	24691121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_24691562_24695846
transcript_63518.known	chr22	+	1019	6	FSM	ENSG00000244752.3	ENST00000651629.1	1019	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.51361950083609	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGGTCTTTGATCT	NA	False	NA	NA	False	AATAAA	-19	NA	25212563	25231870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_25212841_25221403_25221484_25224917_25225037_25227852_25227986_25229435_25229579_25231603
transcript_63519.nnic	chr22	-	948	4	NNC	ENSG00000233577.6	novel	426	3	NA	NA	-431	-860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.46337971105226	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTATTTTGCTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	25283105	25280388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_25280823_25281256_25281386_25282030_25282292_25282981
transcript_6352.known	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	4.32049379893857	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-10	True	NA	-2	True	ATTAAA	-19	NA	145918717	145911349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
transcript_63521.known	chr22	-	1193	4	FSM	ENSG00000100068.14	ENST00000402785.2	1193	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.48074069840786	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGACGATTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	25360189	25351461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_25351903_25354595_25354813_25357254_25357427_25359826
transcript_63522.nnic	chr22	+	1053	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	0	-445	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	61.9883860089937	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCATTCATTCTTCAA	-35	True	NA	31	True	AATAAA	-42	NA	25448079	25461223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_63523.nnic	chr22	+	1508	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	61.9883860089937	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	-35	True	NA	49	True	AATAAA	-24	NA	25448079	25461678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_63524.nnic	chr22	+	869	6	NNC	ENSG00000100058.13	novel	977	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	78.2805212041923	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGTTTGACTTTTCA	-35	True	NA	2	True	ATTAAA	-17	NA	25448079	25520854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25520681
transcript_63530.known	chr22	+	1364	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	25	0	6	0	multi-exon	FALSE	canonical	3	153	junction_1	31.6889176211495	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	-10	True	NA	49	True	AATAAA	-24	NA	25448104	25461678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_63533.nnic	chr22	+	801	4	NIC	ENSG00000100058.13	novel	1389	5	NA	NA	-3	-445	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	83.475878085961	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCATTCATTCTTCAA	-31	True	NA	31	True	AATAAA	-42	NA	25448083	25461223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_25448285_25457258_25457402_25459415_25459516_25460866
transcript_63538.nic	chr22	+	2723	4	FSM	ENSG00000100058.13	ENST00000415709.6	724	4	-12	-1987	0	0	multi-exon	FALSE	canonical	3	153	junction_1	33.5956346370576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCATTGATTCTTC	-28	True	NA	39	True	AATAAA	-14	NA	25448086	25461668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415
transcript_63539.known	chr22	+	6584	17	FSM	ENSG00000100095.19	ENST00000248933.11	6584	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	4.93077073082901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTGTAGAATTTTT	0	True	NA	18	True	AATAAA	-15	NA	26169461	26383596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887_26297081_26298983_26299170_26305978_26306145_26310669_26310837_26311767_26311963_26313763_26313903_26340435_26340633_26347718_26347914_26351051_26351244_26365371_26365567_26373450_26373484_26375574_26375690_26377672_26377776_26380265
transcript_63540.known	chr22	+	3444	17	FSM	ENSG00000100095.19	ENST00000404234.7	3444	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	5.57897840110535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGGGTTTGGATGTT	12	False	NA	33	True	TTTAAA	-8	NA	26169473	26380471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887_26297081_26298983_26299170_26305978_26306145_26310669_26310837_26311767_26311963_26313763_26313903_26340435_26340633_26347718_26347914_26351051_26351244_26365371_26365567_26373450_26373484_26375577_26375690_26377672_26377776_26380265
transcript_63542.known	chr22	-	5066	14	FSM	ENSG00000100099.21	ENST00000398145.7	5066	14	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_13	28.2379994933178	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAACTGACTCACAG	10	True	NA	NA	False	AATAAA	-35	NA	26483783	26450881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_63543.known	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_13	25.3624611950383	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-2	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_63546.nnic	chr22	-	2877	12	NNC	ENSG00000100099.21	novel	5066	14	NA	NA	13	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.9277189930093	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTGAGTAATTAAATG	-22	True	NA	-38	True	AATAAA	-18	NA	26483815	26452100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_26453179_26464450_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_63548.nic	chr22	-	1533	4	ISM	ENSG00000100099.21	ENST00000398145.7	5066	14	-32	25474	13	635	5prime_fragment	FALSE	canonical	3	60	junction_3	45.4386032649185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAAATCATTCCTTTA	-22	True	NA	NA	False	NA	NA	NA	26483815	26476355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483673
transcript_63549.nic	chr22	-	1453	4	ISM	ENSG00000100099.21	ENST00000422379.2	1942	12	-43	12117	2	635	5prime_fragment	FALSE	canonical	3	76	junction_3	37.9326889224701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAAATCATTCCTTTA	26	False	NA	NA	False	NA	NA	NA	26483826	26476355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483764
transcript_63550.nic	chr22	-	1296	4	ISM	ENSG00000100099.21	ENST00000398145.7	5066	14	-32	25711	13	398	5prime_fragment	FALSE	canonical	3	60	junction_3	45.4386032649185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	-22	True	NA	NA	False	ATTAAA	-11	NA	26483815	26476592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483673
transcript_63551.nic	chr22	-	1216	4	ISM	ENSG00000100099.21	ENST00000422379.2	1942	12	-43	12354	2	398	5prime_fragment	FALSE	canonical	3	76	junction_3	37.9326889224701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	26	False	NA	NA	False	ATTAAA	-11	NA	26483826	26476592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483764
transcript_63552.known	chr22	+	3370	4	FSM	ENSG00000128203.7	ENST00000215906.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	7.48331477354788	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGGTGAGGTCATCT	-22	True	NA	11	True	AATAAA	-21	NA	26429259	26445015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26429487_26433391_26434502_26442458_26442573_26443096
transcript_63553.known	chr22	-	2896	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	50.0309237705375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-30	True	NA	-60	True	NA	NA	NA	26512499	26491985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
transcript_63555.known	chr22	-	3539	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_10	17.3193297697535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGCATTAAAGAGTCAT	-4	True	NA	NA	False	AATAAA	-21	NA	26512473	26491239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
transcript_63559.known	chr22	-	2974	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	17.6051364210098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	92	False	NA	-1	True	AATAAA	-26	NA	26512377	26491926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
transcript_6356.known	chr1	-	2905	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_5	3.97953950776689	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGAGATGGCTTTGG	-3	True	NA	NA	False	AATAAA	-23	NA	145996579	145992434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
transcript_63560.known	chr22	-	923	2	FSM	ENSG00000100109.17	ENST00000492137.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	9325	False	NA	-1	True	AATAAA	-26	NA	26494619	26491926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26492369_26494138
transcript_63561.known	chr22	+	981	2	FSM	ENSG00000261188.2	ENST00000565764.2	1663	2	26	656	8	-656	multi-exon	FALSE	canonical	3	40	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAGAAGGGACCTTT	16	True	NA	NA	False	NA	NA	NA	26512554	26513912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26513035_26513411
transcript_63562.known	chr22	+	2032	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGACTTTGCTACTTCTT	-2	True	NA	22	True	AGTAAA	-18	NA	26512536	26514568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26512500_26514600
transcript_63563.known	chr22	-	5653	7	FSM	ENSG00000128294.16	ENST00000338754.9	5653	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_6	38.1910402523361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTTCTCATCAGGAT	-21	True	NA	-12	True	AATAAA	-18	NA	26590132	26521995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
transcript_63564.nnic	chr22	-	979	6	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	151.938671838344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-27	True	NA	16	True	AATAAA	-43	NA	26590138	26525745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26544603_26544676_26590052
transcript_63565.nnic	chr22	-	908	5	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-7	0	combination_of_known_splicesites	TRUE	canonical	1	4	junction_4	169.539081040331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-28	True	NA	16	True	AATAAA	-43	NA	26590139	26525745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26590052
transcript_63566.nnic	chr22	-	686	2	NNC	ENSG00000128294.16	novel	5653	7	NA	NA	-5	-47104	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAATCTCATGCAA	-26	True	NA	NA	False	AATATA	-19	NA	26590137	26588593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_26589195_26590052
transcript_63567.nnic	chr22	-	1102	6	NNC	ENSG00000100122.7	novel	1041	6	NA	NA	1140	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	8.67179335547152	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	7107	False	NA	-1	True	AATAAA	-22	NA	26616887	26599277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26616775
transcript_63568.known	chr22	-	1041	6	FSM	ENSG00000100122.7	ENST00000647684.1	1041	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	9.01997782702375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	0	True	NA	-1	True	AATAAA	-22	NA	26618027	26599277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26617976
transcript_63575.nic	chr22	-	814	4	NIC	ENSG00000100122.7	novel	1041	6	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	12.0830459735946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-18	True	NA	-1	True	AATAAA	-22	NA	26608360	26599277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_26599674_26601878_26602022_26607888_26608022_26608218
transcript_63576.known	chr22	+	809	6	FSM	ENSG00000196431.4	ENST00000354760.4	809	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.748331477354788	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	2	True	NA	6	True	AATAAA	-18	NA	26621962	26630669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26621987_26622584_26622636_26623233_26623353_26625480_26625623_26628287_26628431_26630339
transcript_63578.nnic	chr22	+	965	3	Fusion	ENSG00000225783.9_ENSG00000244625.7	novel	706	3	NA	NA	6	0	multi-exon	FALSE	canonical	3	6	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	-18	True	NA	5	True	AATAAA	-17	NA	26672752	26722172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_+_26672988_26717252_26717460_26721649
transcript_63579.known	chr22	+	10069	5	FSM	ENSG00000225783.9	ENST00000620145.5	10074	5	5	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	3.26917420765551	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	2	True	NA	15	True	ATTAAA	-17	NA	26657519	26676475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_26657655_26663315_26663399_26665530_26666938_26667184_26667311_26668157
transcript_6359.nic	chr1	-	1481	2	ISM	ENSG00000168509.20	ENST00000336751.11	2126	4	2311	0	2310	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTGCCTATGTTGA	2310	False	NA	-2	True	ATTAAA	-21	NA	146019424	146017469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_146018701_146019174
transcript_63595.known	chr22	-	2914	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	255.754983470993	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-10	True	NA	-1	True	AATAAA	-19	NA	27919256	27851668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_63598.known	chr22	-	2826	11	FSM	ENSG00000180957.19	ENST00000320996.14	2826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	312.237665889303	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-9	True	NA	-2	True	AATAAA	-18	NA	27919255	27851669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_27853664_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_63604.known	chr22	+	807	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	52	163	19	53	multi-exon	FALSE	canonical	3	10	junction_2	58.6912827144429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGATAAGTGTCTGGC	52	False	NA	NA	False	NA	NA	NA	27919517	27986229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
transcript_63606.known	chr22	+	898	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	22	0	3	0	multi-exon	FALSE	canonical	3	98	junction_2	18.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	-40	True	NA	22	True	AATAAA	-30	NA	27919425	27924963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922179_27924346
transcript_6361.nnic	chr1	+	2355	4	NNC	ENSG00000233396.9	novel	3851	3	NA	NA	0	-617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCAGATTGTTCA	12	True	NA	NA	False	TATAAA	-18	NA	146052624	146061088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_146052949_146058312_146058462_146058557_146059974_146060622
transcript_63611.known	chr22	+	874	3	FSM	ENSG00000235954.8	ENST00000454996.7	894	3	7	13	2	-13	multi-exon	FALSE	canonical	3	11	junction_2	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	-26	True	NA	NA	False	ATTAAA	-8	NA	27919439	27986379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27935150_27935231_27985691
transcript_63614.known	chr22	-	766	3	FSM	ENSG00000180957.19	ENST00000471825.1	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_2	58.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTATTTTAGAATTT	2	True	NA	NA	False	NA	NA	NA	27919244	27910447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_27911110_27914316_27914348_27919171
transcript_63616.known	chr22	+	662	2	FSM	ENSG00000235954.8	ENST00000436996.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAATTTAGCCCCTAAA	-29	True	NA	NA	False	AAGAAA	-21	NA	27919436	27922570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017
transcript_63618.known	chr22	+	846	2	FSM	ENSG00000235954.8	ENST00000419253.1	846	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	NA	False	NA	NA	False	ATTAAA	-21	NA	27919400	27986392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27985691
transcript_63619.known	chr22	+	1141	5	FSM	ENSG00000235954.8	ENST00000662424.1	1141	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	55.7875434124859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	33	True	NA	NA	False	ATTAAA	-21	NA	27919498	27986392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27940019_27940172_27985691
transcript_6362.known	chr1	+	4486	3	FSM	ENSG00000233396.9	ENST00000664959.1	4486	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTATACTAACTGCTGT	-4	True	NA	NA	False	ATTAAA	-3	NA	146052608	146061935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_146052949_146057693_146058462_146058557
transcript_63620.known	chr22	+	626	3	FSM	ENSG00000235954.8	ENST00000670585.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	67	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTGTAATGGTTCC	32	True	NA	-18	True	AATAAA	-27	NA	27919497	27924714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_27919546_27922017_27922228_27924346
transcript_63623.known	chr22	-	1971	16	FSM	ENSG00000183765.23	ENST00000382580.6	1971	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_14	188.991169693778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGATGGAACCTGG	-17	True	NA	-22	True	NA	NA	NA	28741838	28687762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402_28734728_28741768
transcript_63628.known	chr22	-	1844	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_14	98.0335219635173	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	1	True	NA	-2	True	ATTAAA	-18	NA	28741820	28687742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_6363.known	chr1	-	1874	5	FSM	ENSG00000264343.7	ENST00000362074.7	1874	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.5190060335083	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGTAATTTATTCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	146229026	146155351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189382_146228708
transcript_63636.known	chr22	-	1510	14	FSM	ENSG00000183765.23	ENST00000425190.7	1510	14	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_13	157.142343040733	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	10	True	NA	-2	True	ATTAAA	-18	NA	28741811	28687742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
transcript_63640.known	chr22	-	1771	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	161.571791433351	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-13	True	NA	-2	True	ATTAAA	-18	NA	28741834	28687742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_6366.known	chr1	+	668	2	FSM	ENSG00000287978.1	ENST00000660431.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTTTGTTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	146387201	146388092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_146387323_146387545
transcript_63664.known	chr22	+	792	6	FSM	ENSG00000100209.11	ENST00000420442.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	47.4552420708187	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	6	True	NA	3	True	AATAAA	-15	NA	28742060	28757213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_63668.known	chr22	+	846	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	54.1279964528524	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	15	True	NA	6	True	AATAAA	-17	NA	28742700	28757510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_6367.known	chr1	+	164	1	FSM	ENSG00000273768.1	ENST00000615842.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTAGTTTAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	146376806	146376970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_146376800_146377000
transcript_63673.known	chr22	+	955	5	FSM	ENSG00000100209.11	ENST00000398941.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	63.9623912936344	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTCTTTTCTGGCTT	0	True	NA	11	True	AATAAA	-22	NA	28742054	28757515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28751240_28751289_28757077
transcript_63686.known	chr22	-	1224	12	FSM	ENSG00000183765.23	ENST00000649563.1	1224	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	179.897629291754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGGCTTTGTGCTTC	15	True	NA	-10	True	ATTAAA	-10	NA	28741806	28687750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28741768
transcript_63687.known	chr22	-	1923	16	FSM	ENSG00000183765.23	ENST00000650281.1	1923	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	196.894286356918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAACCTGATGGAACC	15	True	NA	-25	True	NA	NA	NA	28741806	28687765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28738081_28738198_28741768
transcript_63688.known	chr22	-	1690	5	FSM	ENSG00000100219.17	ENST00000405219.7	1690	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	716.398108596052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCATGCAATTAAAAGG	463	False	NA	35	True	TTTAAA	-2	NA	28800133	28794588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28799959
transcript_63689.known	chr22	-	1850	5	FSM	ENSG00000100219.17	ENST00000216037.10	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	1611	junction_3	33.2640947569598	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	-1	True	NA	-8	True	ATTAAA	-18	NA	28800597	28794554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28800297
transcript_63692.known	chr22	+	516	1	FSM	ENSG00000226471.7	ENST00000585003.1	516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTTCGTTCCATT	-6	True	NA	NA	False	AATAAA	-41	NA	28800708	28801224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_28800700_28801200
transcript_63693.known	chr22	+	2128	15	FSM	ENSG00000186998.16	ENST00000334018.11	2128	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	13.6159045657223	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-25	True	NA	17	True	AATAAA	-23	NA	29205895	29259597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_63694.known	chr22	+	2189	18	FSM	ENSG00000182944.18	ENST00000414183.6	2189	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	1345.36162026176	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	0	True	NA	23	True	ATTAAA	-23	NA	29268315	29300343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29274264_29274283_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63701.known	chr22	+	2400	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	1373	junction_8	889.008849435707	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	-15	True	NA	57	True	AATAAA	-21	NA	29268267	29300521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63710.known	chr22	+	2207	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	0	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_8	822.803342144251	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	-10	True	NA	16	True	ATTAAA	-16	NA	29268272	29300336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_6372.known	chr1	-	5343	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	46.7926385279583	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	12	True	NA	-14	True	AATAAA	-19	NA	147172470	147155105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
transcript_63723.known	chr22	+	1989	16	FSM	ENSG00000182944.18	ENST00000332035.10	1989	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1258.61669392322	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	-1	True	NA	16	True	ATTAAA	-16	NA	29268325	29300336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63730.known	chr22	+	2267	15	FSM	ENSG00000182944.18	ENST00000331029.11	2267	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1189.11520227677	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	8	True	NA	61	True	AATAAA	-25	NA	29268290	29300525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288756_29292499_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63732.known	chr22	+	2446	15	FSM	ENSG00000182944.18	ENST00000629659.2	2446	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	1455.16973552355	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCTCGGCCTCTGTTC	1	False	NA	60	True	AATAAA	-24	NA	29268008	29300524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_63743.known	chr22	+	3231	8	FSM	ENSG00000182944.18	ENST00000483415.5	3231	8	0	0	0	0	multi-exon	FALSE	canonical	3	3437	junction_7	578.798509229001	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGGCTTTATGCTG	-3	True	NA	NA	False	NA	NA	NA	29268312	29291019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605
transcript_63748.known	chr22	-	1777	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_4	95.0911843092373	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-5	True	NA	-26	True	AATAAA	-19	NA	29267981	29259871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
transcript_63751.known	chr22	-	1555	7	FSM	ENSG00000100263.14	ENST00000413137.6	1555	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	264.886610961496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAGAATAAAAACCAG	-10	True	NA	-58	True	NA	NA	NA	29267945	29259903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29260238_29260325_29260614_29260701_29260869_29261199_29261426_29265478_29265669_29267425_29267578_29267747
transcript_63759.known	chr22	-	999	3	FSM	ENSG00000100263.14	ENST00000493894.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	43	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCGGGCGGATCA	16	False	NA	NA	False	NA	NA	NA	29267960	29265034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29265669_29267425_29267578_29267747
transcript_6376.known	chr1	+	2967	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	122.156450288585	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	-37	True	NA	27	True	AATAAA	-15	NA	147242683	147295762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_63761.known	chr22	-	4165	23	FSM	ENSG00000100280.17	ENST00000357586.7	4165	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	172.246729868562	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCCCAGCCAGTGTG	-12	True	NA	2	True	AATAAA	-15	NA	29388570	29327679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29328896_29329711_29329721_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29339753_29339775_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_63763.known	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_9	32.125184824371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	15	False	29388598	0	True	AATAAA	-13	NA	29388583	29327681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_63765.known	chr22	+	3795	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	3.39934634239519	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGTGGGTCTAGAGCG	0	True	NA	NA	False	NA	NA	NA	29480217	29491390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
transcript_63766.known	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_20	61.3722249881817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
transcript_63767.known	chr22	-	2374	21	FSM	ENSG00000100296.14	ENST00000397873.6	2374	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	70.8387429306873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGCCAATTAAAAAGC	-36	True	NA	-47	True	NA	NA	NA	29553766	29508357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553670
transcript_63770.known	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_19	54.6223498948301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
transcript_63771.known	chr22	-	4728	20	FSM	ENSG00000100296.14	ENST00000490103.6	4728	20	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_19	57.6151142066173	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAG	-27	True	NA	NA	False	NA	NA	NA	29553757	29505878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
transcript_63785.nnic	chr22	-	1937	10	NNC	ENSG00000184117.12	novel	2013	10	NA	NA	226	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_9	650.230576387435	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTTTCTTCATCT	519	False	NA	NA	False	ATTAAA	-14	NA	29580800	29554807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580747
transcript_63786.known	chr22	-	2013	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	1738	junction_4	173.270358930634	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTTTCTTCATCT	-12	True	NA	NA	False	ATTAAA	-14	NA	29581113	29554807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
transcript_63795.nnic	chr22	-	963	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	20	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	90.3726851555392	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-12	True	NA	-23	True	TATAAA	-18	NA	29766987	29730955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766948
transcript_63797.nnic	chr22	-	1025	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	87.8851839365177	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTGGCTGTGTTTC	25	True	NA	-25	True	TATAAA	-16	NA	29766950	29730957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_29731355_29731527_29731667_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
transcript_63799.known	chr22	-	945	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	43.4722900247963	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-32	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
transcript_63800.nic	chr22	-	912	6	NIC	ENSG00000100319.13	novel	945	6	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_5	57.7047658343745	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	2880	False	NA	-23	True	TATAAA	-18	NA	29767051	29730955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766948
transcript_63802.known	chr22	+	916	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	0	0	0	0	multi-exon	FALSE	canonical	3	9230	junction_1	0	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	-8	True	NA	10	True	AATAAA	-14	NA	29767368	29770413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29767549_29769677
transcript_63803.known	chr22	+	584	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	-3	True	NA	104	True	NA	NA	NA	29767373	29770027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_29767608_29769677
transcript_63805.known	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_19	66.6039788601252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-18	True	NA	-52	True	AAAAAG	-1	NA	29838276	29788641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
transcript_63806.known	chr22	-	2790	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_19	49.6908447845442	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-16	True	NA	-21	True	AATAAA	-19	NA	29838274	29788610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
transcript_63809.known	chr22	-	902	5	FSM	ENSG00000227117.6	ENST00000429350.5	902	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.08972473588517	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	0	True	NA	NA	False	AATAAA	-27	NA	30080230	30008741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30009197_30018616_30018730_30040176_30040279_30050460_30050590_30080127
transcript_63812.known	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	11.4938842433705	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-1	True	NA	-4	True	AATAAA	-16	NA	30289505	30285116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_63813.known	chr22	-	1972	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	15.8740157175177	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTACAGCTAGGGGC	-6	True	NA	0	True	AATAAA	-17	NA	30326941	30291989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_63815.known	chr22	-	5090	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_4	114.969677161705	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATGATCATTAACTCT	9	True	NA	-33	True	AATAAA	-21	NA	30356894	30331987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
transcript_63819.known	chr22	+	4207	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.43775825476164	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGAACCATCCTAGGG	-7	True	NA	NA	False	AATAAA	-29	NA	30397017	30425303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_6382.known	chr1	+	2862	22	FSM	ENSG00000131778.20	ENST00000650721.1	2862	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.4083996946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	-44	True	NA	-11	True	AATATA	-40	NA	147242676	147295724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_63821.known	chr22	+	1733	11	FSM	ENSG00000100003.18	ENST00000405717.7	1733	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.59026461420325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACTTGTGAAAATTTAT	12	True	NA	6	True	ATTAAA	-20	NA	30397036	30416975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233
transcript_63823.known	chr22	-	2011	9	FSM	ENSG00000099999.15	ENST00000382363.8	2011	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.47151715705982	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAAATGTGTATAGGT	-15	True	NA	-9	True	AATAAA	-22	NA	30387411	30378820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30379623_30379710_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
transcript_63824.known	chr22	+	759	4	FSM	ENSG00000242114.6	ENST00000412752.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	260.620200462069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGGGTTTGAGCTGGA	10	True	NA	NA	False	NA	NA	NA	30425779	30428643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30425947_30426716_30426845_30427121_30427404_30428461
transcript_63825.known	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	72.0324001173546	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	-2	True	NA	31	True	AATAAA	-14	NA	30425767	30429054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
transcript_63826.known	chr22	+	912	4	FSM	ENSG00000242114.6	ENST00000407550.3	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	232.356526819359	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGACAACTCAGGGAGAA	11	False	NA	-72	True	NA	NA	NA	30425816	30428951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30425947_30426716_30426845_30427239_30427404_30428461
transcript_63831.known	chr22	+	1759	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGGCACGGTGGCTG	10	False	NA	NA	False	AATAAA	-17	NA	30356634	30367096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30357133_30361960_30362115_30365989
transcript_63833.known	chr22	+	891	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	263	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	6	True	NA	30	True	AATAAA	-13	NA	30425775	30429053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30425947_30426716_30426845_30428461
transcript_63837.known	chr22	-	1635	3	FSM	ENSG00000128242.13	ENST00000406955.5	1635	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	92	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-2	True	NA	-3	True	AGTAAA	-27	NA	30560776	30554634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30556094_30557261_30557402_30560740
transcript_63840.known	chr22	-	1988	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	165.101035856279	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGCCCAGCCTGAT	-3	True	NA	NA	False	NA	NA	NA	30591858	30576834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_63844.known	chr22	-	2265	15	FSM	ENSG00000100029.18	ENST00000354694.12	2265	15	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_9	71.804155413833	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCCATGAGCCTTC	-21	True	NA	-1	True	ATTAAA	-26	NA	30591910	30576624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_63845.known	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	179.202143299865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	9	True	NA	-41	True	NA	NA	NA	30591880	30576664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_6385.known	chr1	+	2841	22	FSM	ENSG00000131778.20	ENST00000651420.1	2841	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	156.228610327325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	-20	True	NA	25	True	AATAAA	-13	NA	147242700	147295760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_63852.known	chr22	+	1870	9	FSM	ENSG00000185339.9	ENST00000407817.3	1870	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	133.911759659113	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGGCCTGGTGCCTCA	-9	True	NA	24	True	ATTAAA	-24	NA	30607203	30627060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30607396_30610870_30611064_30612872_30612962_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_63855.known	chr22	+	2192	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_7	39.0664498003082	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	-11	True	NA	NA	False	NA	NA	NA	30607173	30627271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_63856.known	chr22	+	1936	9	FSM	ENSG00000185339.9	ENST00000405742.7	1936	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	135.366170072142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCAGTGCCTGCCTCT	3	False	NA	-31	True	NA	NA	NA	30607151	30627005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30607396_30610870_30611064_30612884_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_6386.known	chr1	+	2827	22	FSM	ENSG00000131778.20	ENST00000652616.1	2827	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	152.878384520228	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	-48	True	NA	-11	True	AATATA	-40	NA	147242672	147295724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_63864.known	chr22	-	630	3	FSM	ENSG00000100029.18	ENST00000492986.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAGAAGAATGAATATAA	NA	False	NA	NA	False	AATAAA	-20	NA	30607058	30603779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30604103_30605460_30605518_30606808
transcript_63865.known	chr22	-	1306	3	FSM	ENSG00000167065.14	ENST00000404885.5	1306	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGCTCTGTGTGAATT	0	True	NA	-1	True	AGTAAA	-17	NA	30667843	30652050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30652298_30663403_30664081_30667461
transcript_63868.known	chr22	-	5657	26	FSM	ENSG00000133422.14	ENST00000397641.8	5657	26	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_11	28.7506243410469	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGTTTTCTTAGTA	0	True	NA	0	True	TATAAA	-24	NA	30968774	30925129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
transcript_63869.nic	chr22	+	2305	4	NIC	ENSG00000253352.10	novel	3308	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	74.4774387911459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCTTTAAAAAAAAAAAAAAA	3	True	NA	51	True	GATAAA	-12	NA	30969232	30976058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_30969387_30971250_30971780_30972854_30973588_30975169
transcript_63871.nic	chr22	+	1786	3	NIC	ENSG00000253352.10	novel	4650	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	81.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCTTTAAAAAAAAAAAAAAA	-7	True	NA	51	True	GATAAA	-12	NA	30969222	30976058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_30969387_30972854_30973588_30975169
transcript_63873.known	chr22	+	1817	4	FSM	ENSG00000253352.10	ENST00000602971.2	1817	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	48.1317635939788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACTACTGTTTCCAAG	7	True	NA	15	True	NA	NA	NA	30969294	30976022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_30969387_30972047_30972173_30972854_30973602_30975169
transcript_63874.known	chr22	+	3296	21	FSM	ENSG00000183963.19	ENST00000333137.12	3296	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	21.079373804741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	-1	True	NA	28	True	GATAAA	-18	NA	31081317	31104624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_63875.known	chr22	+	3130	20	FSM	ENSG00000183963.19	ENST00000347557.6	3130	20	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_19	18.2117431902523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	0	True	NA	28	True	GATAAA	-18	NA	31081318	31104624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31104315
transcript_63876.nic	chr22	+	899	4	ISM	ENSG00000183963.19	ENST00000624247.1	1263	9	3347	0	-755	0	3prime_fragment	FALSE	canonical	3	105	junction_2	12.7279220613579	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	2740	False	NA	28	True	GATAAA	-18	NA	31098906	31104624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_31099180_31099744_31099897_31100884_31101050_31104315
transcript_63877.nic	chr22	+	734	3	ISM	ENSG00000183963.19	ENST00000619644.4	3227	21	16047	-1	-755	0	3prime_fragment	FALSE	canonical	3	44	junction_2	44	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	2740	False	NA	28	True	GATAAA	-18	NA	31098906	31104624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_31099180_31099744_31099897_31104315
transcript_63878.known	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	12.9494208364699	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-17	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
transcript_63879.known	chr22	-	605	5	FSM	ENSG00000198832.11	ENST00000491958.5	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	138.221516053037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-2	True	NA	NA	False	NA	NA	NA	31107553	31105000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106116_31107376
transcript_63882.known	chr22	+	3348	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	11.5938201929591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	-11	True	NA	6	True	ATTAAA	-14	NA	31122965	31134697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_63884.known	chr22	+	1613	7	FSM	ENSG00000185133.14	ENST00000404453.5	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	7.54431353183752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	17	True	NA	-55	True	NA	NA	NA	31127788	31134636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_63885.known	chr22	-	2600	7	FSM	ENSG00000100078.4	ENST00000215885.4	2600	7	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_5	12.7638813323639	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-5	True	NA	-24	True	ATTAAA	-22	NA	31140508	31134806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
transcript_63889.nnic	chr22	-	2475	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	29.0337734371542	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	NA	False	NA	-24	True	ATTAAA	-22	NA	31140518	31134806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138666_31138800_31139840
transcript_6389.known	chr1	+	2461	21	FSM	ENSG00000131778.20	ENST00000650714.1	2461	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	161.127426281189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATCAGGATCTGGT	-23	True	NA	NA	False	AATAGA	-9	NA	147242697	147295585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_63895.known	chr22	+	3182	7	FSM	ENSG00000138942.17	ENST00000326132.11	3182	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_5	13.7436854187255	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGACTTCTTGTCTGTG	-31	True	NA	6	True	ATTAAA	-24	NA	31160181	31207019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_63896.known	chr22	+	2946	5	FSM	ENSG00000138942.17	ENST00000266252.8	2946	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	74.6939589257391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	30	True	NA	-1	True	ATTAAA	-17	NA	31160242	31207012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31201497_31201616_31204488
transcript_63898.nic	chr22	+	2431	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	10	-292	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	49.1933148123017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATATTGACTCTGC	32	True	NA	NA	False	ATTAAA	-15	NA	31212307	31277346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_63899.nic	chr22	+	2574	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	10	-208	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	49.1933148123017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTTCCAGCGGTCCA	-27	True	NA	NA	False	AATAAA	-45	NA	31212248	31277430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_6390.known	chr1	+	2782	21	FSM	ENSG00000131778.20	ENST00000467213.5	2782	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	161.423387400959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	-37	True	NA	27	True	AATAAA	-15	NA	147242683	147295762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_63900.nic	chr22	+	2782	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	49.1933148123017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	-27	True	NA	NA	False	ATTAAA	-19	NA	31212248	31277638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_63902.known	chr22	+	3667	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_15	21.3412485316321	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	22	True	NA	46	True	AATAAA	-25	NA	31212297	31280080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_63910.known	chr22	-	2420	6	FSM	ENSG00000100100.13	ENST00000215912.10	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	1.89736659610103	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCACATTGCCAAGTTT	-19	True	NA	-6	True	ATTAAA	-11	NA	31292488	31281599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31283289_31289314_31289394_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_63913.known	chr22	-	3711	5	FSM	ENSG00000100105.18	ENST00000405309.7	3711	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	153.18371323349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	341	False	NA	-13	True	ATTAAA	-16	NA	31346232	31325808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31327310_31328786_31328860_31335691_31335864_31342896_31342961_31344331
transcript_63916.nnic	chr22	-	1849	4	NNC	ENSG00000100105.18	novel	3638	4	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	112.3397624273	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	3236	False	NA	-13	True	ATTAAA	-16	NA	31343337	31325808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_31327310_31335691_31335864_31342896_31342961_31343225
transcript_63919.known	chr22	-	3638	4	FSM	ENSG00000100105.18	ENST00000351933.8	3638	4	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	51.6999892542435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	341	False	NA	-13	True	ATTAAA	-16	NA	31346232	31325808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31327310_31335691_31335864_31342896_31342961_31344331
transcript_63920.nnic	chr22	-	1183	3	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	41.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	3236	False	NA	-4	True	GATAAA	-17	NA	31343337	31340676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_31341684_31342896_31342961_31343225
transcript_63921.nnic	chr22	-	1162	3	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	45.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	3233	False	NA	-4	True	GATAAA	-17	NA	31343340	31340676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_31341684_31342896_31342961_31343249
transcript_63922.known	chr22	-	2516	3	FSM	ENSG00000100105.18	ENST00000215919.3	2516	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	1	True	NA	-4	True	GATAAA	-17	NA	31345776	31340676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31341684_31342896_31342961_31344331
transcript_63923.known	chr22	-	1702	2	FSM	ENSG00000100105.18	ENST00000465287.1	1702	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	2982	False	NA	-4	True	GATAAA	-17	NA	31343591	31340676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31341684_31342896
transcript_63924.known	chr22	+	1943	1	FSM	ENSG00000213888.3	ENST00000504184.3	1943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTGCTCTGAGTGTCC	14	False	NA	NA	False	AAAAAG	-21	NA	31346776	31348719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31346800_31348700
transcript_63929.known	chr22	+	1665	9	FSM	ENSG00000185721.13	ENST00000331457.9	1665	9	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_4	72.5017241174305	1476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACCTATTTTGGGAGAT	-5	True	NA	NA	False	NA	NA	NA	31399603	31434452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31399726_31400619_31400744_31403028_31403205_31411011_31411082_31420255_31420426_31423279_31423411_31426614_31426783_31427059_31427183_31433871
transcript_63938.nnic	chr22	+	1337	7	Fusion	ENSG00000214093.3_ENSG00000185721.13	novel	309	3	NA	NA	-11844	73	multi-exon	FALSE	canonical	2	4	junction_6	38.1943131310874	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGGTACTGTATTGA	153	False	NA	NA	False	AATAAA	-18	NA	31496440	31560012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31559492
transcript_63940.known	chr22	-	3647	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	26.0813660363292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-26	True	NA	15	True	ATTAAA	-28	NA	31489842	31439366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_63941.nic	chr22	-	1708	10	ISM	ENSG00000184708.18	ENST00000330125.10	3647	19	64	14693	46	-9428	5prime_fragment	FALSE	canonical	3	158	junction_9	14.229164972073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGTAAGTTGGAAA	38	True	NA	NA	False	AATAAA	-17	NA	31489778	31454059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_63945.known	chr22	+	873	1	FSM	ENSG00000287817.1	ENST00000665497.1	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTTTACAGGCAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	31490149	31491022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31490100_31491000
transcript_63946.nnic	chr22	-	2778	10	NIC	ENSG00000241878.12	novel	2358	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	162.460251548905	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	10	True	NA	-1	True	AATAAA	-18	NA	31662215	31618490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31648100_31648277_31650698_31650779_31662143
transcript_63949.nic	chr22	-	2524	8	NIC	ENSG00000241878.12	novel	2669	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	177.852839879101	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-2	True	NA	-1	True	AATAAA	-18	NA	31630877	31618490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
transcript_63950.known	chr22	-	1963	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	-217	612	-211	-126	multi-exon	FALSE	canonical	3	357	junction_6	21.5804144008934	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTCACCTCATCCTG	5	True	NA	NA	False	NA	NA	NA	31662432	31619102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_63951.nic	chr22	-	2230	7	NIC	ENSG00000241878.12	novel	2669	8	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_6	177.544986474477	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-4	True	NA	-1	True	AATAAA	-18	NA	31630837	31618490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31630803
transcript_63952.known	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	19.192012227313	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	10	True	NA	-1	True	AATAAA	-18	NA	31662215	31618490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
transcript_63953.nic	chr22	-	2605	7	NIC	ENSG00000241878.12	novel	2358	8	NA	NA	-50	0	intron_retention	FALSE	canonical	3	357	junction_5	22.0712230945385	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	166	False	NA	-1	True	AATAAA	-18	NA	31662271	31618490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_31619837_31620552_31620714_31620995_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_63955.known	chr22	-	2194	7	FSM	ENSG00000241878.12	ENST00000397500.5	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	176.731827605808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTGAATTTTTTCAA	2	True	NA	NA	False	NA	NA	NA	31630831	31618613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
transcript_63956.nic	chr22	-	2197	7	NIC	ENSG00000241878.12	novel	2358	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	138.757181996304	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	10	True	NA	-1	True	AATAAA	-18	NA	31662215	31618490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_63959.nic	chr22	-	1612	3	ISM	ENSG00000241878.12	ENST00000474017.5	1760	6	-68	27429	-50	-20995	5prime_fragment	FALSE	canonical	3	357	junction_1	12.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCGGTACTATATCAC	166	False	NA	NA	False	NA	NA	NA	31662271	31646872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_31648277_31650698_31650779_31662143
transcript_63960.nnic	chr22	-	2950	4	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	3	1108	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	39.3813266522205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAAAAGGAAATGGC	17	True	NA	NA	False	NA	NA	NA	31750069	31715618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_31717292_31725537_31725611_31738386_31738912_31749390
transcript_63961.nic	chr22	-	2399	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	12	34272	12	1108	5prime_fragment	FALSE	canonical	3	52	junction_3	17.2497987105808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAAAAGGAAATGGC	17	True	NA	NA	False	NA	NA	NA	31750120	31715618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_63963.known	chr22	-	718	3	FSM	ENSG00000183530.14	ENST00000461722.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	39.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCTGCTGAAAAGACAG	14	True	NA	NA	False	NA	NA	NA	31750072	31716726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31717292_31725537_31725611_31749992
transcript_63965.nic	chr22	-	800	3	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	-68	44197	-60	0	5prime_fragment	FALSE	canonical	3	52	junction_2	19	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTATTTATTTCTCT	NA	False	NA	NA	False	NA	NA	NA	31750200	31725543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_31725611_31738386_31738912_31749992
transcript_63966.known	chr22	-	10827	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_8	22.3295628036019	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	5	True	NA	-8	True	AATAAA	-22	NA	31750132	31681346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
transcript_63968.known	chr22	+	1478	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	41.197694110229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	-75	True	NA	6	True	AATAAA	-20	NA	31753943	31784788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_63970.known	chr22	+	1278	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	13.8377879373836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	9	True	NA	NA	False	AATACA	-30	NA	31754027	31784504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_63974.known	chr22	+	1751	2	FSM	ENSG00000128245.15	ENST00000248975.6	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	1939	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	0	True	NA	46	True	AATAAA	-20	NA	31944534	31957603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31944821_31956138
transcript_63975.known	chr22	+	1735	2	FSM	ENSG00000128245.15	ENST00000471374.1	1735	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	431	False	NA	46	True	AATAAA	-20	NA	31944965	31957603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_31945236_31956138
transcript_63976.known	chr22	+	407	1	FSM	ENSG00000232346.1	ENST00000423610.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGCAGTGCTGTA	22	False	NA	NA	False	NA	NA	NA	32039489	32039896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32039500_32039900
transcript_63978.known	chr22	-	2019	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_1	111.584012006816	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCGTCTGTTGCTTTG	-15	True	NA	-10	True	AAGAAA	-29	NA	32412247	32387581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_63982.known	chr22	-	767	5	FSM	ENSG00000100220.12	ENST00000487704.5	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_1	83.8342859455486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGCCTTTGACATAGA	-9	True	NA	NA	False	NA	NA	NA	32412241	32401561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_63986.known	chr22	+	2060	9	FSM	ENSG00000100225.18	ENST00000266087.12	2060	9	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	110.749435664476	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-2	True	NA	53	True	ATTAAA	-16	NA	32474810	32498829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63987.known	chr22	+	1921	9	FSM	ENSG00000100225.18	ENST00000425028.5	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	216.589437357873	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-15	True	NA	53	True	ATTAAA	-16	NA	32474797	32498829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475125_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63988.known	chr22	+	1888	9	FSM	ENSG00000100225.18	ENST00000397426.5	1888	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	205.767124135514	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	16	False	NA	53	True	ATTAAA	-16	NA	32475256	32498829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475399_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63989.known	chr22	+	1535	9	FSM	ENSG00000100225.18	ENST00000452138.3	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	219.14204155068	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTGTTATTTTCTGAT	244	False	NA	NA	False	NA	NA	NA	32475236	32498608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475399_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63991.known	chr22	+	1900	8	FSM	ENSG00000100225.18	ENST00000420700.5	1900	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	222.869871431373	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-56	True	NA	53	True	ATTAAA	-16	NA	32474675	32498829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_32475125_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63993.nnic	chr22	+	1571	8	NIC	ENSG00000100225.18	novel	1888	9	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	2	44	junction_1	232.790525089464	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-20	True	NA	53	True	ATTAAA	-16	NA	32475278	32498829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_32475399_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_63996.nic	chr22	+	1254	6	ISM	ENSG00000100281.14	ENST00000418170.5	4216	12	-20	30439	15	-199	5prime_fragment	FALSE	canonical	3	35	junction_2	20.2148460295892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGACAAGGAGAAGC	NA	False	NA	21	True	AAAAAG	-21	NA	35257466	35265368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_63997.nic	chr22	+	1453	6	ISM	ENSG00000100281.14	ENST00000418170.5	4216	12	-20	30240	15	0	5prime_fragment	FALSE	canonical	3	35	junction_2	20.2148460295892	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	NA	False	NA	1	True	AAAAAG	-7	NA	35257466	35265567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_63998.nic	chr22	+	1139	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-26	30439	15	-199	5prime_fragment	FALSE	canonical	3	35	junction_2	23.9099874529453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGACAAGGAGAAGC	NA	False	NA	21	True	AAAAAG	-21	NA	35257466	35265368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_63999.nic	chr22	+	1341	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-26	30237	15	0	5prime_fragment	FALSE	canonical	3	35	junction_2	23.9099874529453	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	NA	False	NA	4	True	AAAAAG	-10	NA	35257466	35265570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_64000.known	chr22	+	1325	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.2414363469547	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	4	True	NA	1	True	AAAAAG	-7	NA	35257495	35265567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_64002.known	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	24.8327740429189	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	NA	False	NA	4	True	AAAAAG	-10	NA	35257451	35265570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
transcript_64006.nic	chr22	+	2323	15	NIC	ENSG00000100284.22	novel	2278	15	NA	NA	-25	0	combination_of_known_junctions	TRUE	canonical	2	12	junction_3	60.9682085104983	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	556	False	NA	13	True	ATTAAA	-13	NA	35299830	35347973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_35299981_35317876_35317962_35321958_35322020_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_64007.known	chr22	+	2278	15	FSM	ENSG00000100284.22	ENST00000449058.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_6	21.569654610123	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	17	True	NA	13	True	ATTAAA	-13	NA	35299893	35347973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_6401.known	chr1	+	2505	18	FSM	ENSG00000131778.20	ENST00000361293.10	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	176.100317431026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	-40	True	NA	18	True	AATAAA	-6	NA	147242680	147295753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_64012.nnic	chr22	+	2262	14	NIC	ENSG00000100284.22	novel	2278	15	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	61.2001276248814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	556	False	NA	13	True	ATTAAA	-13	NA	35299830	35347973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_35299981_35317876_35317962_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_64017.known	chr22	+	1554	5	FSM	ENSG00000100292.18	ENST00000216117.9	1554	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.5554619063266	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	1	True	NA	9	True	AATAAA	-19	NA	35381095	35394207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_64022.known	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_10	114.914761209124	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	-8	True	NA	19	True	AATACA	-16	NA	35400139	35425431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
transcript_64030.known	chr22	-	582	4	FSM	ENSG00000198125.13	ENST00000406324.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCCCGGGTTCAAG	814	False	NA	NA	False	NA	NA	NA	35622561	35607271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35607444_35610883_35611107_35617162_35617266_35622477
transcript_64031.nnic	chr22	-	955	3	NIC	ENSG00000198125.13	novel	1043	3	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGCCTGGCATTTTTC	0	True	NA	0	True	AATAAA	-19	NA	35622529	35606763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_35607444_35610883_35611107_35622477
transcript_64034.known	chr22	-	7224	14	FSM	ENSG00000100320.23	ENST00000438146.7	7224	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	136.791553080162	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	-21	True	NA	-5	True	AATAAA	-15	NA	36028824	35738735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
transcript_64036.known	chr22	-	1254	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_12	93.3464276528864	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATTTACTAGTAGAGG	9835	False	NA	-134	True	NA	NA	NA	35840284	35744147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_64038.known	chr22	-	1935	13	FSM	ENSG00000100320.23	ENST00000449924.6	1935	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	138.775898483851	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	8	True	NA	-4	True	ATTAAA	-20	NA	35840407	35743601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_64042.known	chr22	-	1706	12	FSM	ENSG00000100320.23	ENST00000414461.6	1706	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	164.503359758702	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	9901	False	NA	-4	True	ATTAAA	-20	NA	35840218	35743601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_64045.known	chr22	-	6932	12	FSM	ENSG00000100320.23	ENST00000405409.6	6932	12	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	144.718821132853	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	7	True	NA	-5	True	AATAAA	-15	NA	35840587	35738735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_64048.known	chr22	-	1004	4	FSM	ENSG00000100320.23	ENST00000491982.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	103.347310882609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTATCAGAACAATTCAA	12	True	NA	NA	False	AATAAA	-29	NA	35840403	35777655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_35778079_35781599_35781744_35809779_35810005_35840191
transcript_64049.known	chr22	-	2429	5	FSM	ENSG00000128335.14	ENST00000358502.10	2429	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3.56195171219375	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTTGTTCGAGTCAT	-1	True	NA	-5	True	AATAAA	-17	NA	36239527	36226208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440
transcript_6405.known	chr1	+	2358	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	128.062103464491	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGCTTTCTTTCCCT	-37	True	NA	30	True	AATAAA	-18	NA	147242683	147295765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_64050.known	chr22	-	7451	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	0	0	0	multi-exon	TRUE	canonical	3	844	junction_34	166.361862742036	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCGTGTCTGTAGCATT	-14	True	NA	-5	True	AATAAA	-16	NA	36387967	36281279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_64054.nnic	chr22	-	864	5	NNC	ENSG00000100348.10	novel	1336	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	293.748510634522	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	20	False	36481657	-14	True	AATAAA	-19	NA	36481637	36467045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_36467328_36467796_36467918_36476732_36476857_36480574_36480838_36481563
transcript_64059.known	chr22	-	736	4	FSM	ENSG00000100348.10	ENST00000487725.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	311.690373429929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTCCCAGGATGTGTG	-18	True	NA	NA	False	NA	NA	NA	36481632	36467548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480749_36481563
transcript_64060.known	chr22	-	1280	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	306.510467466719	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-20	True	NA	-14	True	AATAAA	-19	NA	36481634	36467045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
transcript_64061.known	chr22	-	912	4	FSM	ENSG00000100348.10	ENST00000403313.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	323.463547662896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCATACGCCTTTCA	1	True	NA	NA	False	NA	NA	NA	36481340	36467590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481142
transcript_64062.known	chr22	-	1336	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_3	21.6487105081727	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	17	False	36481657	-14	True	AATAAA	-19	NA	36481640	36467045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
transcript_64069.nnic	chr22	-	1593	3	NIC	ENSG00000100348.10	novel	1336	4	NA	NA	-383	-2	combination_of_known_splicesites	TRUE	canonical	3	43	junction_1	305.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAATGTCACATCTGTG	NA	False	NA	-16	True	AATAAA	-17	NA	36482023	36467047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_36467918_36480574_36480838_36481563
transcript_64079.known	chr22	-	1880	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	0	0	0	multi-exon	TRUE	canonical	3	1215	junction_9	115.809220316018	1362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	-7	True	NA	-20	True	AATAAA	-23	NA	36529166	36510854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
transcript_64087.nic	chr22	-	846	8	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	86	junction_7	175.065468803379	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	24	False	36776152	-8	True	AATAAA	-17	NA	36776128	36758210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673_36775795_36776030
transcript_64089.known	chr22	-	1073	7	FSM	ENSG00000100360.15	ENST00000433985.7	1073	7	0	0	0	0	multi-exon	FALSE	canonical	2	397	junction_3	76.9437023630481	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-18	True	NA	-8	True	AATAAA	-17	NA	36776119	36758210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
transcript_64093.known	chr22	-	406	3	FSM	ENSG00000100360.15	ENST00000465023.1	406	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	300.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTCTCTTTATGGGAA	453	False	NA	NA	False	NA	NA	NA	36775699	36767062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36767366_36767782_36767860_36775673
transcript_64094.nic	chr22	-	688	5	NIC	ENSG00000100362.13	novel	595	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	11.7686022959398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-1	True	NA	-17	True	AATAAA	-15	NA	36817516	36800702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817355
transcript_64095.known	chr22	-	550	4	FSM	ENSG00000100362.13	ENST00000417718.7	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-10	True	NA	-17	True	AATAAA	-15	NA	36817035	36800702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944
transcript_64096.known	chr22	-	1125	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	44.5	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	-3	True	NA	-21	True	AATAAA	-16	NA	37019447	37010864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37011326_37018137_37018754_37019399
transcript_64097.known	chr22	+	1763	9	FSM	ENSG00000100379.18	ENST00000403888.8	1760	9	-3	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	61.7149445029322	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	-5	True	NA	28	True	AATAAA	-19	NA	37051738	37063390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061176_37061538_37061630_37062524
transcript_64098.known	chr22	+	1691	8	FSM	ENSG00000100379.18	ENST00000402077.8	1691	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	37.1368126949912	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	-5	True	NA	28	True	AATAAA	-19	NA	37051738	37063390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538_37061630_37062524
transcript_6410.known	chr1	+	1822	12	FSM	ENSG00000131778.20	ENST00000652587.1	1822	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	161.523889694834	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGCATAATAATAAATT	NA	False	NA	-5	True	NA	NA	NA	147242653	147295730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_64106.known	chr22	-	1647	4	FSM	ENSG00000133466.14	ENST00000397110.6	1647	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.93025150224688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCAGACTGGTTCTTTC	12	True	NA	-2	True	ATTAAA	-20	NA	37188286	37180166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37180868_37182151_37182736_37185217_37185456_37188162
transcript_64107.known	chr22	-	2893	3	FSM	ENSG00000133466.14	ENST00000337843.7	2893	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGACTGGTTCTTTCT	-4	True	NA	-1	True	ATTAAA	-21	NA	37188247	37180165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37182736_37185217_37185456_37188162
transcript_64108.known	chr22	-	688	6	FSM	ENSG00000133466.14	ENST00000497071.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.73286382647969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTACCTTGTGTA	604	False	NA	-3	True	AATAAA	-16	NA	37199385	37190552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37190678_37190864_37190929_37191671_37191738_37195380_37195513_37197602_37197842_37199323
transcript_64109.known	chr22	-	1472	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	3.43592135468138	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	-7	True	NA	-15	True	AATAAA	-14	NA	37244269	37225269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
transcript_64111.known	chr22	-	2073	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	4.55801603815538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	7	True	NA	-1	True	ATTAAA	-21	NA	37486384	37469062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
transcript_64112.nic	chr22	-	2025	7	NIC	ENSG00000100060.18	novel	2073	8	NA	NA	-1	0	intron_retention	FALSE	canonical	2	6	junction_6	6.8414585839246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	6	True	NA	-1	True	ATTAAA	-21	NA	37486385	37469062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485922
transcript_64113.known	chr22	-	2034	7	FSM	ENSG00000100060.18	ENST00000416983.7	2034	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.02619644270067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	4	True	NA	-1	True	ATTAAA	-21	NA	37486387	37469062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485915
transcript_64118.known	chr22	+	2800	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	20.6131594800506	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	-21	True	NA	17	True	AATAAA	-18	NA	37608833	37633564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_64119.nic	chr22	+	2845	17	NIC	ENSG00000100083.19	novel	3205	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	63.498738914643	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	-2	True	NA	17	True	AATAAA	-18	NA	37609039	37633564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_37609155_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_64127.known	chr22	+	1384	3	FSM	ENSG00000100083.19	ENST00000489772.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATAATGTACA	-25	True	NA	NA	False	AAAAAG	-7	NA	37608829	37618146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37608904_37614189_37614275_37616921
transcript_64129.known	chr22	+	528	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	16.0831174424198	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	-2	True	NA	15	True	AATAAA	-26	NA	37675635	37679802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
transcript_64130.nnic	chr22	+	662	3	NNC	ENSG00000100097.12	novel	185	3	NA	NA	425	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	410	False	NA	15	True	AATAAA	-26	NA	37677423	37679802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37677714_37678482_37678655_37679602
transcript_64134.known	chr22	+	903	7	FSM	ENSG00000273899.5	ENST00000611699.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	22.4530374089763	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	7	True	NA	12	True	ATTAAA	-14	NA	37686359	37693471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_64135.nnic	chr22	+	1563	7	NNC	ENSG00000273899.5	novel	903	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	97.8411410853782	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	4597	False	NA	15	True	ATTAAA	-17	NA	37686304	37693474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37692027_37693331
transcript_64136.nnic	chr22	+	1440	7	NNC	ENSG00000273899.5	novel	813	5	NA	NA	204	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	103.460808468177	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	172	False	NA	12	True	ATTAAA	-14	NA	37686563	37693471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37687217_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_64137.nnic	chr22	+	1251	7	NNC	ENSG00000273899.5	novel	813	5	NA	NA	228	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	101.279179608754	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	196	False	NA	12	True	ATTAAA	-14	NA	37686587	37693471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37687052_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_64138.nnic	chr22	+	1305	7	NNC	ENSG00000273899.5	novel	813	5	NA	NA	232	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.18853103869	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	200	False	NA	12	True	ATTAAA	-14	NA	37686591	37693471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_37687110_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_64141.known	chr22	+	2830	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	20.6842935581566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	-10	True	NA	15	True	ATTAAA	-17	NA	37686342	37693474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
transcript_6415.known	chr1	-	2331	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	6.12244844812923	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGGCTCACAGTCAT	12	True	NA	-5	True	AATAAA	-15	NA	147225339	147186260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
transcript_64150.known	chr22	+	2204	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	949	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	0	True	NA	17	True	AATAAA	-17	NA	37805228	37807432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37805200_37807400
transcript_64152.known	chr22	+	1656	10	FSM	ENSG00000100116.17	ENST00000323205.10	1656	10	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_9	129.194465347952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCGTGGTGGCGTAT	-28	True	NA	5	True	ACTAAA	-12	NA	37807904	37817176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566_37816726_37816928
transcript_64155.known	chr22	+	1473	9	FSM	ENSG00000100116.17	ENST00000248924.11	1473	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	32.3803084451029	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	1	True	NA	28	True	NA	NA	NA	37807933	37816897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_64158.nic	chr22	+	1562	9	ISM	ENSG00000100116.17	ENST00000323205.10	1656	10	18	279	0	0	5prime_fragment	FALSE	canonical	3	65	junction_1	98.5544741500862	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	-10	True	NA	28	True	NA	NA	NA	37807922	37816897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_64165.nic	chr22	+	1351	8	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	117.84735890125	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	-8	True	NA	28	True	NA	NA	NA	37807924	37816897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_64168.nic	chr22	+	1488	7	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_1	123.379383294869	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	-8	True	NA	28	True	NA	NA	NA	37807924	37816897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815501_37815662_37815835_37816199_37816322_37816566
transcript_64175.known	chr22	-	1140	1	FSM	ENSG00000100124.15	ENST00000609706.1	1140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGCCTTAGTTTAGCC	4	True	NA	-4	True	AATAAA	-19	NA	37849318	37848178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_37848200_37849300
transcript_64176.known	chr22	+	4710	16	FSM	ENSG00000100139.14	ENST00000215957.10	4710	16	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_6	12.5563618226866	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTGATACTGTGTGT	-20	True	NA	NA	False	NA	NA	NA	37906296	37942822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
transcript_64177.known	chr22	+	550	6	FSM	ENSG00000100142.16	ENST00000492213.5	550	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	901.184198707456	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCATCATCACCGACTG	7	True	NA	-64	True	NA	NA	NA	37953698	37967694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956843_37958373_37958472_37959345_37959477_37967098_37967171_37967624
transcript_64182.known	chr22	+	2070	5	FSM	ENSG00000100142.16	ENST00000442738.7	2070	5	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_4	86.9004459137006	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTCTGTTTTCTTA	7	True	NA	15	True	AATAAA	-16	NA	37953698	37969312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_64183.known	chr22	+	615	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	782.673742692317	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	7	True	NA	40	True	AATAAA	-14	NA	37953698	37967798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
transcript_64184.known	chr22	+	760	4	FSM	ENSG00000100142.16	ENST00000606538.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_3	34.6634613902818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGCGGCAGAGCTG	19	True	NA	42	True	NA	NA	NA	37953710	37967560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098
transcript_6419.known	chr1	+	662	6	FSM	ENSG00000131778.20	ENST00000492728.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_5	14.8243043681651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACATGTACAGCTGTCC	25	True	NA	NA	False	NA	NA	NA	147242745	147260046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836
transcript_64190.known	chr22	+	2058	13	FSM	ENSG00000100151.16	ENST00000356976.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.1917292776368	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	3	True	NA	28	True	AATAAA	-20	NA	38057403	38075701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_64191.nic	chr22	-	728	2	ISM	ENSG00000100156.12	ENST00000320521.10	2091	5	2359	0	2167	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATTCCTCCGCCCAG	7954	False	NA	NA	False	GATAAA	-20	NA	38080996	38078133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_38078705_38080839
transcript_64193.nic	chr22	-	1105	5	ISM	ENSG00000128298.18	ENST00000332536.10	1865	9	8802	248	-3	0	3prime_fragment	FALSE	canonical	3	28	junction_4	4.60298815988049	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCGGCAGCAGGACTG	-30	True	NA	-17	True	AATAAA	-16	NA	38088980	38084899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38088747
transcript_64195.known	chr22	-	1770	15	FSM	ENSG00000283900.1	ENST00000400206.7	1770	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	503.691576345716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	396	False	NA	-76	True	NA	NA	NA	38398522	38291917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336607_38336707_38361398_38361561_38380369_38380424_38380936_38380991_38398437
transcript_64197.nnic	chr22	-	1488	9	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	996	6	NA	NA	8226	0	multi-exon	FALSE	canonical	3	41	junction_1	530.490088856521	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTGCCTCTTTCAT	NA	False	NA	-2	True	ATTAAA	-18	NA	38336208	38297601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_-_38297999_38298093_38298204_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_64198.nnic	chr22	-	1463	8	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1631	8	NA	NA	8226	0	multi-exon	FALSE	canonical	3	44	junction_1	486.475915463994	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	NA	False	NA	-4	True	AATAAA	-16	NA	38336208	38296204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_64199.nnic	chr22	-	1931	8	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2127	8	NA	NA	8226	0	multi-exon	FALSE	canonical	3	47	junction_1	485.749326467125	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	NA	False	NA	-5	True	AATAAA	-15	NA	38336208	38296205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_64202.known	chr22	-	974	5	FSM	ENSG00000244627.5	ENST00000457665.5	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.1877477344383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAACTCCGTTCCCCC	58	False	NA	NA	False	NA	NA	NA	38398860	38350376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38351000_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_64205.nnic	chr22	-	770	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	-2	-2410	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	56.7995378502325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGTGTTTGCTGA	-13	True	NA	NA	False	AATAAA	-37	NA	38398931	38352786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_38353135_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_64208.nnic	chr22	-	676	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	-2	3358	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	53.183644102299	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATTTTCACAATTTTT	-13	True	NA	NA	False	ATTAAA	-14	NA	38398931	38357040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_38357295_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_64209.nnic	chr22	-	532	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	0	3272	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	53.183644102299	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAACTCTTTTCAAAAC	1	True	NA	NA	False	ATTAAA	-15	NA	38398873	38357126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_38357295_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_64211.nnic	chr22	-	1056	5	NNC	ENSG00000244627.5	novel	468	3	NA	NA	343	1918	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	61.8263697785985	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTATATTTTGCAATT	401	False	NA	NA	False	ATTAAA	-26	NA	38398517	38366979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_38367788_38369985_38370046_38380369_38380424_38380936_38380991_38398437
transcript_64214.known	chr22	-	679	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	23.6690139681023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	-11	True	NA	NA	False	NA	NA	NA	38398929	38361139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
transcript_64215.nnic	chr22	-	1857	4	ISM	ENSG00000283900.1	ENST00000400206.7	1770	15	5	67974	5	-67974	5prime_fragment	FALSE	canonical	3	12	junction_3	58.8349858124871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAATAAAAAACAATG	401	False	NA	NA	False	AATACA	-14	NA	38398517	38359891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398437
transcript_64221.known	chr22	+	1694	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	13.7931142241337	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	5	True	NA	19	True	AATAAA	-21	NA	38468095	38483447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
transcript_64223.known	chr22	+	931	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10.077477638554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGCCAATAGGTTAT	-13	True	NA	NA	False	AATAAA	-20	NA	38468077	38481635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
transcript_64228.known	chr22	-	2269	14	FSM	ENSG00000100206.11	ENST00000216024.7	2269	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.3168461117557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGGTGAAAATATGTAA	2	True	NA	1	True	AATAAA	-20	NA	38570183	38518947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38520090_38521607_38521725_38537591_38537653_38538294_38538410_38538538_38538613_38539320_38539413_38549924_38549998_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570042
transcript_6423.known	chr1	+	1571	2	FSM	ENSG00000180867.11	ENST00000440377.2	1571	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGCATACTAATTCCC	25	True	NA	NA	False	TATAAA	-19	NA	147172770	147175205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147173560_147174423
transcript_64232.nic	chr22	-	2120	12	NIC	ENSG00000100206.11	novel	2269	14	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	6.58447962262975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGGTGAAAATATGTAA	-14	True	NA	1	True	AATAAA	-20	NA	38570199	38518947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_38520090_38521607_38521725_38537591_38537653_38538294_38538410_38538538_38538613_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570042
transcript_64235.nnic	chr22	-	2078	11	NIC	ENSG00000100206.11	novel	2269	14	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	8.38152730712011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGGTGAAAATATGTAA	-14	True	NA	1	True	AATAAA	-20	NA	38570199	38518947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_38520090_38521607_38521725_38537591_38537653_38538294_38538410_38538538_38538613_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570042
transcript_64240.known	chr22	-	269	2	FSM	ENSG00000100206.11	ENST00000464842.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGATTTCTTTTT	-19	False	NA	-10	True	AATAAA	-22	NA	38570204	38569283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38569391_38570042
transcript_64243.known	chr22	+	1269	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	127.215722298779	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	-7	True	NA	9	True	ATTAAA	-10	NA	38656650	38673846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_64244.nnic	chr22	+	1332	6	NIC	ENSG00000100211.11	novel	1269	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	151.435002558854	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	-22	True	NA	9	True	ATTAAA	-10	NA	38656635	38673846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_38656751_38656955_38657144_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_64245.known	chr22	+	776	5	FSM	ENSG00000100211.11	ENST00000489847.1	776	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	138.254068656224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAACTAGAAGGTGCTTC	30	False	NA	NA	False	AATAGA	-42	NA	38656687	38673413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38656751_38668016_38668133_38670766_38670990_38671069_38671189_38673158
transcript_64248.known	chr22	+	1133	5	FSM	ENSG00000100211.11	ENST00000216029.8	1146	5	17	-4	4	4	multi-exon	FALSE	canonical	3	303	junction_1	16.768646337734	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGACCAAAGTGACTAA	-3	True	NA	17	True	ATTAAA	-18	NA	38656654	38673854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38656751_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_6425.known	chr1	-	2168	7	FSM	ENSG00000131781.13	ENST00000369272.7	2168	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.231157059221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGGCTCACAGTCAT	308	False	NA	-5	True	AATAAA	-15	NA	147225309	147186260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147187246_147190176_147190250_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894
transcript_64256.known	chr22	-	786	2	FSM	ENSG00000228274.5	ENST00000431924.3	876	2	90	0	17	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTAATCTGT	69	False	NA	NA	False	AATAAA	-21	NA	38681770	38667584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38668326_38681725
transcript_64257.known	chr22	+	2031	4	FSM	ENSG00000100216.6	ENST00000216034.6	2031	4	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_2	39.7520090337862	730	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAGACATCTTTTGAA	-5	True	NA	10	True	ATTAAA	-16	NA	38681956	38685421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38682096_38682322_38682442_38682878_38682997_38683766
transcript_64259.known	chr22	-	1474	4	FSM	ENSG00000100246.13	ENST00000216068.9	1474	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	6.79869268479038	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	2	True	NA	-6	True	ATTAAA	-16	NA	38794143	38778507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38779614_38780925_38781010_38782662_38782871_38794067
transcript_6426.known	chr1	+	2937	23	FSM	ENSG00000131778.20	ENST00000622533.4	2937	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	125.885565573797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	-37	True	NA	25	True	AATAAA	-13	NA	147242683	147295760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147242831_147252622_147252736_147254897_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264589_147265935_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_64261.nnic	chr22	-	1266	3	NIC	ENSG00000100246.13	novel	1474	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	40	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	2	True	NA	-6	True	ATTAAA	-16	NA	38794143	38778507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_38779614_38780925_38781010_38794067
transcript_64262.known	chr22	-	758	2	FSM	ENSG00000100246.13	ENST00000475512.2	758	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGTCATCAGTGTAG	13	True	NA	NA	False	GATAAA	-18	NA	38794132	38785304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38785998_38794067
transcript_64263.known	chr22	-	6052	5	FSM	ENSG00000183741.12	ENST00000407418.8	6052	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3.69966214673719	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTGGCTTTTCAAA	9	True	NA	26	True	NA	NA	NA	38872216	38861421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_64264.known	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	17.4998542267981	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	-5	True	NA	25	True	AATAAA	-39	NA	38982346	38992779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
transcript_64266.known	chr22	+	1844	7	FSM	ENSG00000179750.16	ENST00000402182.7	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	18.6048082196213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGGACCTGTAGCTGG	2	True	NA	50	True	NA	NA	NA	38982398	38992804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033
transcript_64269.known	chr22	-	691	5	FSM	ENSG00000249310.2	ENST00000513758.2	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7.79021822544144	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCGTAATCATAGATGCG	NA	False	NA	NA	False	NA	NA	NA	38998209	38991558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_38991619_38992397_38992582_38992937_38993004_38997480_38997738_38998085
transcript_6427.known	chr1	-	6956	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	11.8769410369447	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTTGGCACCCAGG	-3	True	NA	NA	False	AATAAA	-23	NA	147670524	147642229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_64274.known	chr22	+	2515	7	FSM	ENSG00000243811.12	ENST00000216099.13	2515	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	34.6874937437432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAGAAACATCCTTTG	0	True	NA	46	True	AATATA	-17	NA	39021126	39033277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39021537_39022821_39023015_39025069_39025350_39025556_39025672_39029362_39029520_39031693_39031974_39032197
transcript_64277.known	chr22	+	1961	4	FSM	ENSG00000243811.12	ENST00000427494.6	1961	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	43.3922676163495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGTTGAAAACCAGTTT	1290	False	NA	30	True	AATAAA	-38	NA	39021112	39033261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39021537_39022821_39023015_39031693_39031974_39032197
transcript_64278.known	chr22	+	1056	3	FSM	ENSG00000244509.4	ENST00000428892.1	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGTGAACAGAGATC	3	True	NA	-84	True	NA	NA	NA	39014261	39018926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39014380_39017765_39018046_39018268
transcript_64279.known	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	22.573337271116	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	-2	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
transcript_64281.known	chr22	+	616	3	FSM	ENSG00000128394.17	ENST00000381565.2	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCCTCTGGGAAGTC	238	False	NA	7	True	AATAAA	-20	NA	39040856	39044423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39040978_39042936_39043091_39044082
transcript_64282.known	chr22	+	4496	7	FSM	ENSG00000128394.17	ENST00000308521.10	4496	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	20.7846096908265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTCTGAGAGGTTTTG	-11	True	NA	18	True	ATTAAA	-19	NA	39040863	39055972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39040978_39042936_39043091_39044940_39045221_39045427_39045543_39049424_39049582_39052073_39052354_39052576
transcript_64284.known	chr22	+	1564	8	FSM	ENSG00000239713.9	ENST00000407997.4	1564	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	20.3800622858594	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	-3	True	NA	14	True	AATAAA	-24	NA	39077274	39087743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39077379_39078931_39079086_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
transcript_64288.known	chr22	-	3728	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.13991411612474	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGTCTCCATAGAGG	-3	True	NA	NA	False	NA	NA	NA	39244982	39223358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
transcript_6430.nic	chr1	-	2479	9	NIC	ENSG00000162836.12	novel	4564	8	NA	NA	-27	0	intron_retention	FALSE	canonical	3	23	junction_2	28.314086600136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	9714	False	NA	-2	True	AATAAA	-17	NA	147670551	147647367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_147648412_147650142_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_64305.known	chr22	-	1296	10	FSM	ENSG00000100316.16	ENST00000216146.9	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	22032	junction_9	4762.82577188515	58749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	0	True	NA	-2	True	AATAAA	-19	NA	39319623	39312881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319594
transcript_64313.known	chr22	+	1361	4	FSM	ENSG00000100321.15	ENST00000318801.8	1361	4	0	0	0	0	multi-exon	TRUE	canonical	3	547	junction_3	31.6684210040363	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCATTCTTCTCTCCA	65	False	NA	30	True	AATAAA	-31	NA	39349924	39378389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39377597
transcript_64323.known	chr22	+	3198	11	FSM	ENSG00000100324.14	ENST00000216160.11	3198	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	8.44748483277715	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTTGCTCATGTTT	5	True	NA	15	True	AATAAA	-28	NA	39399779	39431882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39430014
transcript_64324.known	chr22	+	1660	11	FSM	ENSG00000100324.14	ENST00000331454.3	1660	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	26.9794366138361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGAGCTCAGGGCTCT	9	True	NA	NA	False	NA	NA	NA	39399783	39436823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39436489
transcript_64326.known	chr22	+	1379	7	FSM	ENSG00000100335.15	ENST00000428069.1	1379	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	72.1882184908929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCATCAGTGACCCTCG	-1	True	NA	NA	False	NA	NA	NA	39502396	39513866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39502438_39504202_39504535_39509421_39509572_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_64327.known	chr22	+	5688	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	24.6219414344198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	-1	True	NA	17	True	AATAAA	-17	NA	39502289	39518132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_64330.known	chr22	+	3838	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	46.9535941116332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	11	True	NA	7	True	ATTAAA	-20	NA	39502301	39516380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_64336.known	chr22	+	1004	2	FSM	ENSG00000128272.18	ENST00000680446.1	1004	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	14	False	NA	-44	True	AAGAAA	-13	NA	39520577	39522602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_39520752_39521772
transcript_64337.known	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	365.437751197109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-5	True	NA	-69	True	NA	NA	NA	39532761	39529155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
transcript_64341.nnic	chr22	-	812	4	NNC	ENSG00000187051.9	novel	820	4	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	405.839869899447	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	378	False	NA	-6	True	AATAAA	-14	NA	39532695	39529092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_39529624_39529819_39529918_39532394_39532524_39532641
transcript_64342.known	chr22	-	820	4	FSM	ENSG00000187051.9	ENST00000334678.8	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_3	121.282956574927	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	8	True	NA	-6	True	AATAAA	-14	NA	39532748	39529092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_39529624_39529819_39529918_39532394_39532524_39532686
transcript_64345.known	chr22	+	17933	21	FSM	ENSG00000100354.21	ENST00000335727.13	17933	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.0838641081295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	12	False	NA	7	True	AATAAA	-20	NA	40177941	40335808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_64347.nic	chr22	+	532	5	ISM	ENSG00000100354.21	ENST00000301923.13	15958	24	-44	89720	-44	-275	5prime_fragment	FALSE	canonical	1	4	junction_4	5.40254569624358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCACTCAGAAGGTAGG	0	True	NA	63	True	GATAAA	-10	NA	40044772	40246087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114_40156183_40246014
transcript_64348.nic	chr22	+	1351	5	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-16	70454	-16	18992	5prime_fragment	FALSE	canonical	3	41	junction_3	8.32165848854662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACACTAACTCCTTGA	3	True	NA	NA	False	NA	NA	NA	40177908	40265354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687
transcript_64349.nic	chr22	+	1566	4	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-16	72753	-16	16693	5prime_fragment	FALSE	canonical	3	41	junction_3	4.78423336480244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGTGAGAGTTTTTAAT	3	True	NA	NA	False	NA	NA	NA	40177908	40263055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831
transcript_64350.known	chr22	+	564	2	FSM	ENSG00000100354.21	ENST00000489500.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTAGAGATGGGG	-5	True	NA	NA	False	NA	NA	NA	40177924	40246362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40178141_40246014
transcript_64351.known	chr22	+	415	4	FSM	ENSG00000100354.21	ENST00000441751.5	415	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	4.32049379893857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCACAGTTTATTTAA	-11	True	NA	NA	False	AAGAAA	-8	NA	40044816	40156182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114
transcript_64352.known	chr22	-	4343	14	FSM	ENSG00000196588.21	ENST00000402042.7	4343	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	31.6360591206678	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTAGTCCATCTTAT	4	True	NA	-8	True	AATAAA	-13	NA	40636691	40410289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
transcript_64353.known	chr22	+	2986	22	FSM	ENSG00000100359.21	ENST00000248929.14	2986	22	0	0	0	0	multi-exon	TRUE	canonical	3	284	junction_3	43.74000695721	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTGTGTTTATTTT	-29	True	NA	12	True	NA	NA	NA	40370593	40410289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_64376.known	chr22	+	1808	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	320.692716134648	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	2	True	NA	NA	False	AGTAAA	-23	NA	40346502	40366996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
transcript_64377.known	chr22	+	1859	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	332.83805611383	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	-1	True	NA	NA	False	NA	NA	NA	40346499	40367837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
transcript_64378.known	chr22	+	1336	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	388.143571502563	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	-16	True	NA	NA	NA	40346460	40366614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
transcript_64379.known	chr22	+	1682	13	FSM	ENSG00000239900.14	ENST00000637666.2	1682	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	435.999681447386	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	-1	True	NA	NA	False	NA	NA	NA	40346499	40367837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435_40366499_40367468
transcript_64380.known	chr22	+	2851	2	FSM	ENSG00000128285.5	ENST00000249016.5	2115	2	-734	-2	-523	2	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGGATGTTCTTGTG	NA	False	NA	19	True	AATAAA	-29	NA	40678749	40682814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40679735_40680948
transcript_64387.known	chr22	-	2226	9	FSM	ENSG00000100372.15	ENST00000435456.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_6	23.1378342763535	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	11	True	NA	-2	True	ATTAAA	-18	NA	40819346	40769629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40794513_40794581_40799022_40799084_40819194
transcript_64399.known	chr22	-	2058	8	FSM	ENSG00000100372.15	ENST00000263255.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	139.293992427996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	27	True	NA	-2	True	ATTAAA	-18	NA	40819330	40769629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40794513_40794581_40799022_40799084_40819194
transcript_6440.nnic	chr1	+	1817	15	NNC	ENSG00000188092.15	novel	2160	14	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	77.0560357990289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCCTTACGTTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	147928387	147993341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710_147992945_147993068
transcript_64406.known	chr22	-	2060	7	FSM	ENSG00000100372.15	ENST00000544408.5	2060	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	147.500282485605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	NA	False	NA	-2	True	ATTAAA	-18	NA	40819399	40769629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40799022_40799084_40819194
transcript_64410.nnic	chr22	-	1517	6	NIC	ENSG00000100372.15	novel	2060	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_5	151.585751309284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATATTCTTGAAAA	-18	True	NA	-16	True	AATAAA	-11	NA	40819375	40770087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40819194
transcript_64417.known	chr22	-	3212	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_3	83.4618733166268	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAACCAGAAATGTT	8	True	NA	-13	True	AATATA	-22	NA	40856639	40824534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
transcript_64438.known	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	7.55718936583642	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	-4	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_6444.known	chr1	+	1954	14	FSM	ENSG00000188092.15	ENST00000488165.5	1954	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	74.830222037473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928392	147993339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943976_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_64442.nnic	chr22	+	2563	9	NIC	ENSG00000196236.13	novel	2737	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.1428450116404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCATCTTTTCTCTTC	-11	True	NA	13	True	AATAAA	-18	NA	40857095	40927505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_40857246_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_64444.known	chr22	+	1418	3	FSM	ENSG00000196236.13	ENST00000482652.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	-10	True	NA	12	True	ATTAAA	-25	NA	40857096	40862770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40857246_40860677_40860794_40861617
transcript_64446.nnic	chr22	+	366	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	-3	-939	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTATGCCTCAGCTACT	-13	True	NA	20	True	CATAAA	-28	NA	40857093	40861831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_40857246_40861617
transcript_64447.nnic	chr22	+	1305	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	-13	True	NA	12	True	ATTAAA	-25	NA	40857093	40862770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_40857246_40861617
transcript_64450.known	chr22	+	1169	5	FSM	ENSG00000100387.9	ENST00000216225.9	1169	5	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_4	176.918590035078	1852	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTATGAGAATCTAACG	-2	True	NA	NA	False	NA	NA	NA	40951377	40973309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_40951477_40953554_40953634_40964046_40964118_40967798_40967885_40972475
transcript_6446.known	chr1	+	2160	14	FSM	ENSG00000188092.15	ENST00000314163.12	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	40.9116525406817	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTTCCTTTTTTTTT	-1	True	NA	74	True	NA	NA	NA	147928419	147993592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_64460.nnic	chr22	-	1381	3	NNC	ENSG00000231993.1	novel	457	3	NA	NA	-52	-10627	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTATGGATTTATTTC	-6	True	NA	-23	True	TATAAA	-15	NA	41197508	41185217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_41186324_41195481_41195522_41197273
transcript_64463.known	chr22	+	3189	17	FSM	ENSG00000100395.15	ENST00000216237.10	3189	17	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_3	24.4648184900277	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	-10	True	NA	13	True	ATTAAA	-17	NA	41205311	41231271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
transcript_64467.known	chr22	-	3828	16	FSM	ENSG00000100401.20	ENST00000356244.8	3828	16	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_15	75.9893559797833	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATGTATTAATATAT	10	True	NA	-3	True	CATAAA	-17	NA	41286187	41244778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
transcript_64468.nnic	chr22	-	2916	16	NNC	ENSG00000100401.20	novel	3469	17	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_15	223.788729733102	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-10	True	NA	-21	True	AATAAA	-18	NA	41286207	41245610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41286085
transcript_64474.nic	chr22	+	1534	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-17	20509	-17	2795	5prime_fragment	FALSE	canonical	3	24	junction_4	5.82961190818051	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAAGCTGCACAATGT	5	True	NA	NA	False	NA	NA	NA	41301507	41339638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_64480.known	chr22	+	2734	18	FSM	ENSG00000100412.17	ENST00000216254.9	2734	18	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_14	40.2659841673944	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGTTCTGTGAGTGAT	-10	True	NA	17	True	AAAACA	-15	NA	41469116	41528974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_64483.known	chr22	+	1460	10	FSM	ENSG00000100412.17	ENST00000466237.2	1460	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	123.864123085155	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAAGAGATTTCTA	-10	True	NA	19	True	AATAAA	-32	NA	41469116	41521590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41521298
transcript_64490.known	chr22	-	4176	7	FSM	ENSG00000100413.17	ENST00000396504.6	4176	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	97.8536321928488	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGCTTGTTTTTGGTC	-41	True	NA	-3	True	AATAAA	-35	NA	41544489	41525803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544427
transcript_64493.nic	chr22	+	1071	6	ISM	ENSG00000100412.17	ENST00000678454.1	2501	8	0	3350	0	0	5prime_fragment	FALSE	canonical	3	391	junction_1	36.0699320764539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACCTGTCGAGGCTGCCG	-10	True	NA	3	True	ATTAAA	-17	NA	41469116	41516123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766
transcript_64495.known	chr22	-	1464	6	FSM	ENSG00000100413.17	ENST00000431534.5	1464	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	117.792359684319	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCTTAAGATCTGAACC	-7	True	NA	-25	True	AATAAA	-14	NA	41544455	41528842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532603_41532746_41540698_41540796_41543990
transcript_64496.known	chr22	-	4468	6	FSM	ENSG00000100413.17	ENST00000355209.9	4468	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	38.7628688308799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTTTGGTCGGTGC	-22	True	NA	2	True	AATAAA	-40	NA	41544470	41525798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990
transcript_64500.known	chr22	-	1330	5	FSM	ENSG00000100413.17	ENST00000337566.9	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	132.320633311665	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-14	True	NA	-24	True	AATAAA	-15	NA	41544462	41528841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41540698_41540796_41543990
transcript_64504.known	chr22	-	292	4	FSM	ENSG00000100410.8	ENST00000491254.1	292	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	314.007430909949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACGCAAAAAATACGGCT	182	False	NA	NA	False	NA	NA	NA	41468499	41460431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468454
transcript_64505.known	chr22	-	1053	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_3	17.0163320241336	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTCCCCATTTAACT	-11	True	NA	-22	True	AATAAA	-22	NA	41468692	41459716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
transcript_64508.known	chr22	-	1242	8	FSM	ENSG00000100417.12	ENST00000216259.8	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	16.2279677956148	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-19	True	NA	NA	False	ATTAAA	-15	NA	41589840	41576899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41586075_41586194_41589718
transcript_6451.nic	chr1	+	1871	13	NIC	ENSG00000188092.15	novel	1954	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	76.0717406283189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928395	147993339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_147928579_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_64510.known	chr22	-	1576	8	FSM	ENSG00000100417.12	ENST00000472620.5	1576	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	60.2078034131518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCACAGTATTAAAGTT	-5	True	NA	NA	False	NA	NA	NA	41589871	41576930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589051_41589164_41589718
transcript_64511.nnic	chr22	-	1132	7	NIC	ENSG00000100417.12	novel	1242	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	49.2837588754033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	18	False	NA	NA	False	ATTAAA	-15	NA	41589848	41576899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41589718
transcript_64512.nnic	chr22	-	1146	7	NIC	ENSG00000100417.12	novel	1242	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	45.2646538580479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-15	True	NA	NA	False	ATTAAA	-15	NA	41589836	41576899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584526_41584604_41586075_41586194_41589718
transcript_64513.known	chr22	-	1405	7	FSM	ENSG00000100417.12	ENST00000485648.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	10.2252411001186	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTTTGTCACAGTATT	3	True	NA	NA	False	NA	NA	NA	41589818	41576936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589718
transcript_64516.known	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	10.0876161703348	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	12	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_64523.known	chr22	+	2122	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	0	0	0	0	multi-exon	FALSE	canonical	3	4455	junction_1	410.280053405259	5268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTTTTGTGTGAAG	-4	True	NA	16	True	AATAAA	-22	NA	41621294	41664041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64524.known	chr22	+	2006	13	FSM	ENSG00000196419.13	ENST00000402580.7	2006	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1474.5731091291	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	-4	True	NA	23	True	AATAAA	-29	NA	41621294	41664048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636235_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64525.known	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1504.59941835766	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	-4	True	NA	14	True	AATAAA	-20	NA	41621460	41664039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64530.known	chr22	+	2148	12	FSM	ENSG00000196419.13	ENST00000428575.6	2148	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	1461.33204829426	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	2006	False	NA	23	True	AATAAA	-29	NA	41621162	41664048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41621346_41621989_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64535.known	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4792	junction_3	351.060753848336	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	51	False	NA	14	True	AATAAA	-20	NA	41621349	41664039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_64538.known	chr22	-	1036	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1033.91951115914	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTCCAGCTTTCAG	-15	True	NA	-115	True	NA	NA	NA	41688895	41674614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
transcript_64543.known	chr22	+	4852	3	FSM	ENSG00000184208.12	ENST00000472110.3	4852	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTACTGGGGCCACC	-27	True	NA	NA	False	NA	NA	NA	41688936	41697886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41689305_41690783_41690844_41693462
transcript_64544.known	chr22	-	640	2	FSM	ENSG00000100138.15	ENST00000469522.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATGCTTGGTACAGA	-13	True	NA	-22	True	AATAAA	-17	NA	41688847	41687741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41688328_41688793
transcript_64546.known	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	1846	junction_2	328.5	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	13	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41675196_41680243_41680365_41688793
transcript_64548.known	chr22	+	7135	7	FSM	ENSG00000100147.14	ENST00000255784.6	7135	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	6.42045342808607	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGATCCCATGGTA	0	True	NA	19	True	AATAAA	-20	NA	41800678	41832164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_41800767_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_64549.nic	chr22	+	1779	4	ISM	ENSG00000198911.12	ENST00000424354.5	5699	22	73	35393	73	-5453	5prime_fragment	FALSE	canonical	3	792	junction_3	57.7811964800545	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTACTGATGCATGAAACA	21	False	NA	NA	False	NA	NA	NA	41833236	41871913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888
transcript_64555.nnic	chr22	-	1213	6	NNC	ENSG00000100162.15	novel	938	6	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	239.277746562442	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	342	False	NA	-21	True	AAAAAG	-12	NA	41946803	41938736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946109_41946211_41946416
transcript_64556.known	chr22	-	938	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_3	43.9909081515715	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-7	True	NA	-21	True	AAAAAG	-12	NA	41947152	41938736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_6456.known	chr1	+	2633	14	FSM	ENSG00000188092.15	ENST00000478307.5	2633	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	81.1061835975006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTCAGTTATGTCATT	NA	False	NA	3	True	AATAGA	-14	NA	147928392	147993521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968357_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_64563.known	chr22	-	818	5	FSM	ENSG00000100162.15	ENST00000407253.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	192.40500903043	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATCACTGGTCTC	9	True	NA	-33	True	NA	NA	NA	41947136	41938748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_64565.known	chr22	-	905	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	206.4175918429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	457	False	NA	-21	True	AAAAAG	-12	NA	41946688	41938736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
transcript_64566.known	chr22	-	1002	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_3	49.103844045044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	452	False	NA	-21	True	AAAAAG	-12	NA	41946693	41938736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
transcript_64568.known	chr22	-	1856	10	FSM	ENSG00000198951.12	ENST00000403363.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	55.5477772332571	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-15	True	NA	-40	True	NA	NA	NA	42070830	42059795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070367_42070762
transcript_64569.known	chr22	-	1869	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	53.7132303172236	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTCAGGTCACCAATA	-27	True	NA	-46	True	NA	NA	NA	42070842	42059801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
transcript_6457.known	chr1	-	164	1	FSM	ENSG00000206585.1	ENST00000383858.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	-4	True	NA	NA	False	NA	NA	NA	148038916	148038752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_148038800_148038900
transcript_64571.known	chr22	-	3696	9	FSM	ENSG00000198951.12	ENST00000396398.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	13.3925119003121	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	3	True	NA	19	True	NA	NA	NA	42070812	42058333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281
transcript_64573.known	chr22	+	540	1	FSM	ENSG00000286659.1	ENST00000662963.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAATAGATTGATTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	42070948	42071488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42070900_42071500
transcript_64575.known	chr22	+	2335	3	FSM	ENSG00000177096.9	ENST00000321753.8	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	3	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCCGCTCCCTGGGTT	-15	True	NA	3	True	AGTAAA	-16	NA	42074247	42079438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42074342_42075570_42075653_42077279
transcript_64576.known	chr22	+	1562	3	FSM	ENSG00000183172.9	ENST00000331479.4	1562	3	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	38	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTCCTCTGAGTT	-3	True	NA	4	True	AATAAA	-13	NA	42079699	42084284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42079955_42081924_42082066_42083118
transcript_64578.known	chr22	+	591	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	321.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	-12	True	NA	9	True	AATAAA	-15	NA	42079690	42083353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42079906_42081924_42082066_42083118
transcript_64579.known	chr22	-	1183	3	FSM	ENSG00000184983.11	ENST00000617763.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	4343	junction_1	404	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTTGGATGGTGGT	NA	False	NA	-2	True	AATAAA	-24	NA	42090884	42085526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42086315_42087059_42087176_42090605
transcript_64585.known	chr22	-	780	2	FSM	ENSG00000229891.3	ENST00000432473.2	896	2	116	0	40	0	multi-exon	FALSE	canonical	3	118	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTTCCATTTCTGT	9082	False	NA	-15	True	AATAAA	-18	NA	42369168	42364399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42364726_42368714
transcript_64586.known	chr22	-	1142	2	FSM	ENSG00000229891.3	ENST00000424852.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCCCTGTATTAAATG	9014	False	NA	-140	True	AATAAA	-27	NA	42369236	42364524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42365145_42368714
transcript_64587.known	chr22	-	475	2	FSM	ENSG00000229891.3	ENST00000412060.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTGTTCCATTTCT	9042	False	NA	-17	True	AATAAA	-16	NA	42369208	42364401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42364726_42369057
transcript_6459.known	chr1	+	1968	2	FSM	ENSG00000232265.8	ENST00000657111.1	1968	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTTGAGCATTC	524	False	NA	15	True	AGTAAA	-21	NA	148156195	148158546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_148156407_148156789
transcript_64593.known	chr22	-	5419	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_4	149.846310153659	583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGAACCTTTTTTTTT	-1	True	NA	-7	True	AATAAA	-14	NA	42519796	42508343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
transcript_64595.known	chr22	+	1346	11	FSM	ENSG00000172250.17	ENST00000359906.7	1385	11	37	2	11	0	multi-exon	FALSE	canonical	1	3	junction_10	11.2800709217629	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTCG	NA	False	NA	NA	False	AATAAA	-18	NA	42500589	42512560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42500693_42501624_42501775_42501918_42502033_42502350_42502393_42502748_42502769_42503198_42503274_42505032_42505143_42509027_42509111_42510630_42510725_42511815_42511928_42512117
transcript_64596.nnic	chr22	+	1451	13	NNC	ENSG00000183569.18	novel	1337	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	8.51306185941475	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	NA	False	NA	4	True	AATAAA	-18	NA	42553922	42574382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42563388_42563470_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_64597.nnic	chr22	+	1332	12	NNC	ENSG00000183569.18	novel	596	3	NA	NA	-3929	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.67488014319164	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	NA	False	NA	4	True	AATAAA	-18	NA	42549687	42574382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_+_42549770_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_64599.known	chr22	+	1337	12	FSM	ENSG00000183569.18	ENST00000327678.10	1337	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	6.93297307815913	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	-2	True	NA	4	True	AATAAA	-18	NA	42553955	42574382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_64600.known	chr22	+	2096	11	FSM	ENSG00000183569.18	ENST00000477564.5	2096	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	10.9252002269981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTTGAGGCTTTTTT	NA	False	NA	3	True	AATAAA	-17	NA	42553858	42574381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42571120_42571902_42572435_42572530_42573935
transcript_64601.nic	chr22	+	1392	11	NIC	ENSG00000183569.18	novel	1337	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	9.0575934993794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	NA	False	NA	4	True	AATAAA	-18	NA	42553858	42574382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_42554043_42554937_42555088_42555231_42555346_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_64605.nnic	chr22	-	1655	9	NNC	ENSG00000182841.13	novel	2387	8	NA	NA	0	-10	intron_retention	FALSE	canonical	2	5	junction_1	169.657329269914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCGGGTTGGAGGGTA	-19	True	NA	NA	False	AATAAA	-14	NA	42582039	42555221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_42555803_42556524_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64609.known	chr22	-	2375	8	FSM	ENSG00000182841.13	ENST00000357802.7	2387	8	1	11	0	-11	multi-exon	FALSE	canonical	3	54	junction_1	167.040994601777	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCGGGTTGGAGGGT	-18	True	NA	NA	False	AATAAA	-13	NA	42582038	42555222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_6461.known	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	12	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	1146	False	NA	-3	True	AATAAA	-16	NA	148459757	148432958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_148433644_148435145_148435355_148459601
transcript_64611.nnic	chr22	-	1035	8	NNC	ENSG00000182841.13	novel	2359	7	NA	NA	0	1471	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	170.460480787202	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCAGTGCTTCGTT	-19	True	NA	1	True	TTTAAA	-18	NA	42582039	42571772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_42571884_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64612.known	chr22	-	833	7	FSM	ENSG00000182841.13	ENST00000458605.6	2359	7	37	1489	-4	-353	multi-exon	FALSE	canonical	3	129	junction_5	167.714042345893	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGAGAGCCGCAGTGGA	19	True	NA	NA	False	NA	NA	NA	42582001	42574732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_64617.known	chr22	-	3362	9	FSM	ENSG00000100227.19	ENST00000252115.10	3362	9	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_6	69.2527075282981	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	1	True	NA	-5	True	AATAAA	-16	NA	42614883	42583720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
transcript_64619.known	chr22	-	3323	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	159.290262587209	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	0	True	NA	-5	True	AATAAA	-16	NA	42614931	42583720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
transcript_64625.known	chr22	-	2916	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	0	0	0	multi-exon	FALSE	canonical	3	1493	junction_8	98.6585019144321	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAAGATAGGTGGCTG	-22	True	NA	-6	True	AATAAA	-15	NA	42649392	42617839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
transcript_64628.known	chr22	-	2092	3	FSM	ENSG00000128274.17	ENST00000642412.2	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	8.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGCCTTGTGATTGGT	0	True	NA	-20	True	AATAAA	-16	NA	42720870	42692120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42693998_42695490_42695632_42720796
transcript_64629.known	chr22	-	1956	3	FSM	ENSG00000128274.17	ENST00000381278.4	1956	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	14	True	NA	-21	True	AATAAA	-15	NA	42720819	42692121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42693998_42695574_42695632_42720796
transcript_64630.known	chr22	-	407	2	FSM	ENSG00000128274.17	ENST00000647439.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTATTTGCATATCT	8	True	NA	NA	False	AATAAA	-25	NA	42720862	42718245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42718587_42720796
transcript_64631.known	chr22	-	3251	11	FSM	ENSG00000100266.19	ENST00000263246.8	3251	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	38.270615359568	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-20	True	NA	-18	True	AATAAA	-17	NA	43015149	42869772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
transcript_64633.nnic	chr22	-	3118	10	NIC	ENSG00000100266.19	novel	3251	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	137.585887878117	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	18	False	43015171	-18	True	AATAAA	-17	NA	43015153	42869772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_43015020
transcript_64636.known	chr22	-	2728	16	FSM	ENSG00000242247.11	ENST00000263245.10	2728	16	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	22.4908870434227	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-26	True	NA	3	True	AATAAA	-41	NA	42857273	42796501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_64637.nic	chr22	-	2640	15	NIC	ENSG00000242247.11	novel	2728	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	35.9685945780255	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	NA	False	NA	3	True	AATAAA	-41	NA	42857317	42796501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_64641.nnic	chr22	-	1612	12	NNC	ENSG00000100271.17	novel	1659	12	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	26.7822563686921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGGAGTCTGTTTGAC	33	False	NA	-5	True	AATAAA	-20	NA	43089363	43039643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43086095_43086128_43089276
transcript_64642.known	chr22	-	1736	11	FSM	ENSG00000100271.17	ENST00000266254.12	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.63379468330107	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCTTCAAGCATGTA	5	True	NA	NA	False	ATTAAA	-22	NA	43089391	43039515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43089276
transcript_64644.known	chr22	+	951	5	FSM	ENSG00000100290.3	ENST00000216115.3	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.31790237980706	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCTCTGGGG	1	True	NA	15	True	AATAAA	-17	NA	43110749	43129712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43110804_43124015_43124184_43127696_43127796_43128495_43128626_43129212
transcript_64646.known	chr22	+	836	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	44.0933353492591	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCCTTTTTGCTTGGG	3	True	NA	25	True	AATAAA	-18	NA	43151558	43163242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
transcript_64647.known	chr22	+	636	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	153.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	-9	True	NA	24	True	AATAAA	-17	NA	43151546	43163241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43151605_43161051_43161191_43162802
transcript_64648.known	chr22	+	859	2	FSM	ENSG00000261251.1	ENST00000563715.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTATATGCAACAGATG	NA	False	NA	NA	False	NA	NA	NA	43812455	43817394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43812834_43816913
transcript_64649.known	chr22	-	2197	7	FSM	ENSG00000100341.13	ENST00000381198.7	2000	7	0	-197	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	6.59334681495083	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	43892013	43879678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43891687
transcript_6465.known	chr1	+	2746	17	FSM	ENSG00000178104.19	ENST00000479408.6	2746	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	41.4935518333873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGCCAATAAAGTTTAT	NA	False	NA	-13	True	NA	NA	NA	148951936	148981746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_148952155_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_64656.known	chr22	+	1692	15	FSM	ENSG00000100347.15	ENST00000350028.5	1692	15	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_8	440.442895138009	1136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	4	True	NA	26	True	AATAAA	-17	NA	43955441	43996529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43955599_43963285_43963397_43964451_43964554_43968730_43968819_43972235_43972343_43972870_43973002_43973235_43973324_43976054_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
transcript_64658.known	chr22	+	2753	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	13.7289611770155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAAGACAGCTGGG	14	True	NA	NA	False	AATAAA	-18	NA	43923804	43947582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_64661.known	chr22	+	2222	9	FSM	ENSG00000100344.11	ENST00000423180.2	2222	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.9442258531422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCGGTTG	12	True	NA	79	True	NA	NA	NA	43923802	43947061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_43924087_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_64664.nnic	chr22	+	1603	12	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	2	-78	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	94.789109113925	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTAATGAAAACTCCAT	-13	True	NA	38	True	NA	NA	NA	44752559	44862706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859679_44859835_44862274
transcript_64667.nnic	chr22	+	1393	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-5	-78	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	98.7522657967907	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTAATGAAAACTCCAT	-4	True	NA	38	True	NA	NA	NA	44752568	44862706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64668.nnic	chr22	+	1332	10	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	2	-78	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	101.570020851639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTAATGAAAACTCCAT	-13	True	NA	38	True	NA	NA	NA	44752559	44862706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44786456_44786607_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_6467.known	chr1	+	8824	17	FSM	ENSG00000178104.19	ENST00000529945.2	8824	17	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	20.3867872346282	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTTTTATTCTTAA	194	False	NA	10	True	AATAAA	-22	NA	148952340	148986477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_64671.known	chr22	+	1725	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	119.482100007584	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	-15	True	NA	116	True	NA	NA	NA	44752557	44862784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64673.known	chr22	+	1615	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	30.5935768119512	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	2	True	NA	116	True	NA	NA	NA	44752574	44862784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64674.known	chr22	+	1487	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	94.8082802291024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGGATGGATGTTTT	30	False	NA	120	True	NA	NA	NA	44752602	44862788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
transcript_64676.nic	chr22	+	1481	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-1	-64	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	96.1351132521307	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGCCTCTGGTCCTTG	-16	True	NA	52	True	AATGAA	-3	NA	44752556	44862720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_44752628_44786456_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64678.known	chr22	+	2905	10	FSM	ENSG00000241484.10	ENST00000460809.5	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	27.1843273656162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1	True	NA	NA	False	NA	NA	NA	44752573	44850963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931
transcript_64682.known	chr22	+	1474	10	FSM	ENSG00000241484.10	ENST00000389772.8	1474	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	100.792905884012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	11	False	NA	116	True	NA	NA	NA	44786456	44862784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_64692.nnic	chr22	-	915	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-34	True	NA	-3	True	ACTAAA	-17	NA	45163831	45134289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_45134798_45138823_45138917_45163517
transcript_64693.nnic	chr22	-	793	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	9.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	NA	False	NA	-3	True	ACTAAA	-17	NA	45163858	45134289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr22_-_45134798_45138823_45138917_45163666
transcript_64697.known	chr22	+	5151	8	FSM	ENSG00000093000.19	ENST00000347635.9	5151	8	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	64.4309470578814	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTCTTATGTTCCT	-7	True	NA	NA	False	AATAAA	-23	NA	45163924	45188017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
transcript_64700.known	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.4342018240014	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	-19	True	NA	13	True	AATAAA	-14	NA	45309933	45341955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_64707.known	chr22	+	1490	7	FSM	ENSG00000128408.9	ENST00000614167.2	1490	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	5.15320827791344	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTATTTCTGTGAGG	-21	True	NA	104	True	AAAACA	-14	NA	45413692	45432509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289_45422409_45425947_45426176_45430899_45431067_45432283
transcript_64709.nic	chr22	+	1442	4	ISM	ENSG00000128408.9	ENST00000614167.2	1490	7	-8	9536	-8	467	5prime_fragment	FALSE	canonical	3	11	junction_3	3.85861230093008	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTTTGTTTGTTT	-29	True	NA	17	True	NA	NA	NA	45413684	45422973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289
transcript_6471.nnic	chr1	+	664	4	NNC	ENSG00000274265.5	novel	1022	3	NA	NA	-7	2435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.7156650905785	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGGCAGACATT	-10	True	NA	NA	False	AATAAA	-16	NA	149176014	149262422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_149176251_149250564_149250630_149259501_149259610_149262167
transcript_64710.known	chr22	+	3294	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_4	72.1914351276183	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGTAATGGTTATGT	-25	True	NA	NA	False	AATAAA	-26	NA	45671833	45845307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_64713.known	chr22	+	1185	10	FSM	ENSG00000130638.17	ENST00000640901.1	1185	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	378.591476624659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGATTTCTTAGTATGTA	24	False	NA	NA	False	AATAAA	-19	NA	45672063	45740541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45734388_45734418_45738750_45738840_45740368
transcript_64717.known	chr22	+	1207	2	FSM	ENSG00000273145.1	ENST00000608290.1	1207	2	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTCTTTTTGT	2635	False	NA	17	True	CATAAA	-19	NA	46013605	46015498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46013811_46014496
transcript_64720.known	chr22	-	1489	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	19.4821855949366	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-16	True	NA	-12	True	AATAAA	-22	NA	46250293	46244012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
transcript_64722.known	chr22	-	498	3	FSM	ENSG00000205643.11	ENST00000474256.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	48	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGGGTAGTCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	46250311	46244908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46247109_46247222_46250255
transcript_64725.known	chr22	-	655	2	FSM	ENSG00000205643.11	ENST00000475605.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGGATAGAATTTTTA	-17	True	NA	-103	True	NA	NA	NA	46250294	46244622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46245239_46250255
transcript_64727.known	chr22	+	2566	14	FSM	ENSG00000075234.17	ENST00000381031.8	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_7	16.8687940593793	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	-12	True	NA	18	True	ATTAAA	-23	NA	46268007	46294008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292790
transcript_64733.known	chr22	-	1518	1	FSM	ENSG00000277232.2	ENST00000623117.1	1518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCGTCAGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	46296660	46295142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46295100_46296700
transcript_64734.known	chr22	+	2983	12	FSM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	66.7319790265012	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	-31	True	NA	22	True	AATAAA	-19	NA	46296869	46330810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_64742.known	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	95.9126686105647	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	-17	True	NA	21	True	AATAAA	-17	NA	46335713	46357340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64744.known	chr22	+	1882	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	111.882259541001	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64747.known	chr22	+	1258	11	FSM	ENSG00000100416.15	ENST00000644006.1	1258	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	144.648850669475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGGCCTGAGTCCCTT	167	False	NA	NA	False	NA	NA	NA	46335950	46356979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46336107_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64748.known	chr22	+	1381	10	FSM	ENSG00000100416.15	ENST00000381019.3	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	140.699838110939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCTCTGGCTGCTGG	14	True	NA	NA	False	NA	NA	NA	46335744	46357184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_6475.nnic	chr1	+	644	3	NNC	ENSG00000274265.5	novel	918	3	NA	NA	-5	-3652	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGACTTCCTAGTT	-8	True	NA	NA	False	AATAAA	-25	NA	149176016	149256335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_149176251_149250564_149250630_149255990
transcript_64753.nic	chr22	+	2013	10	NIC	ENSG00000100416.15	novel	1882	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	115	junction_4	117.806809839009	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	318	False	NA	19	True	AATAAA	-15	NA	46335695	46357338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46356073_46356841
transcript_6476.known	chr1	+	918	3	FSM	ENSG00000274265.5	ENST00000667654.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	-2	True	NA	11	True	AATAAA	-34	NA	149175892	149251069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149176251_149177157_149177213_149250564
transcript_64761.known	chr22	+	1830	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	98.9314515144978	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64762.known	chr22	+	1775	10	FSM	ENSG00000100416.15	ENST00000453630.5	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	116.711208428495	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_64763.known	chr22	+	1793	10	FSM	ENSG00000100416.15	ENST00000441818.5	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	115.519866283565	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	23	False	NA	16	True	AATAAA	-12	NA	46335400	46357335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_6477.known	chr1	+	1006	2	FSM	ENSG00000274265.5	ENST00000668239.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGCGTGATGGTATG	NA	False	NA	9	True	AATAAA	-32	NA	149175747	149251067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149176251_149250564
transcript_64772.known	chr22	+	1688	9	FSM	ENSG00000100416.15	ENST00000456595.5	1688	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	159.970309745277	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_64773.nic	chr22	+	1906	9	NIC	ENSG00000100416.15	novel	1775	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	115	junction_3	123.756565482402	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	318	False	NA	19	True	AATAAA	-15	NA	46335695	46357338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46356073_46356841
transcript_6478.known	chr1	+	1417	2	FSM	ENSG00000274265.5	ENST00000655610.1	1417	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATTAAAGTGAATATCA	-5	True	NA	NA	False	TTTAAA	-42	NA	149175889	149178213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149176251_149177157
transcript_64783.known	chr22	+	1476	2	FSM	ENSG00000100416.15	ENST00000476901.1	1476	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	NA	False	NA	10	True	AATAAA	-16	NA	46330874	46333699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46331733_46333081
transcript_64784.known	chr22	+	591	2	FSM	ENSG00000100416.15	ENST00000493556.2	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCCCAGTTAGGA	311	False	NA	NA	False	NA	NA	NA	46335688	46338211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46335847_46337778
transcript_64786.known	chr22	-	670	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTAAAATTATTTTT	NA	False	NA	-24	True	AATAAA	-32	NA	46762563	46761893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_46761900_46762600
transcript_64787.known	chr22	+	3758	13	FSM	ENSG00000054611.14	ENST00000337137.9	3758	13	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_1	17.5045628972055	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGGCCTTGGCCTGTGA	2	True	NA	14	True	AATAAA	-14	NA	46762649	47175693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_64789.known	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.6375671009769	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	24	True	NA	26	True	AATAAA	-13	NA	46762671	47174083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_6479.nnic	chr1	+	1547	4	Fusion	ENSG00000274265.5_ENSG00000272755.1	novel	1022	3	NA	NA	0	-7	multi-exon	FALSE	canonical	2	4	junction_3	5.31245915016974	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCCCTGTTTTGGTGA	-2	True	NA	3	True	AATAAA	-14	NA	149175892	149264809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_149176251_149259501_149259610_149262167_149262277_149263837
transcript_64796.nnic	chr22	+	1592	10	NIC	ENSG00000054611.14	novel	1949	12	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.048283838211	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	-17	True	NA	26	True	AATAAA	-13	NA	46762630	47174083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_46762849_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_64800.known	chr22	+	1428	10	FSM	ENSG00000184164.15	ENST00000328268.9	1428	10	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	70.4919223110784	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGGGCGTGGGTTTGTCT	-11	True	NA	31	True	AATAAA	-28	NA	49918633	49927537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_64803.known	chr22	-	5330	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	13.3259238671688	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCTTTCCTAGACGG	0	True	NA	NA	False	GATAAA	-14	NA	49918438	49900228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_64805.nic	chr22	-	2475	9	NIC	ENSG00000182858.14	novel	5330	10	NA	NA	-20	434	intron_retention	FALSE	canonical	3	131	junction_2	14.0356688476182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTACAGAAAATAATGAGA	-20	True	NA	NA	False	AATAAA	-21	NA	49918458	49903215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_-_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_64806.known	chr22	+	1577	11	FSM	ENSG00000184164.15	ENST00000404488.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	218.400457874978	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGGTTTGTCTCAT	-10	True	NA	34	True	AATAAA	-31	NA	49918634	49927540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922296_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_64807.nic	chr22	+	1456	2	ISM	ENSG00000198355.5	ENST00000360612.5	2102	6	1771	0	1771	0	3prime_fragment	FALSE	canonical	3	301	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATCCTGTATTTAT	995	False	NA	20	True	ATTAAA	-16	NA	49962542	49964072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_+_49962866_49962939
transcript_64809.known	chr22	+	3052	3	FSM	ENSG00000073150.14	ENST00000395842.3	3052	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTCCGCCGGGGACT	-15	True	NA	27	True	AATAAA	-18	NA	50170730	50180295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50170957_50176938_50178403_50178933
transcript_64811.known	chr22	+	2305	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	64.9229362730999	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	-5	True	NA	16	True	AATAAA	-16	NA	50185912	50199595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_64813.nnic	chr22	+	1542	10	NIC	ENSG00000170638.10	novel	2305	10	NA	NA	-12	-4	combination_of_known_splicesites	TRUE	canonical	2	4	junction_9	131.083518753842	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCCTGTTTTGTGACG	-17	True	NA	12	True	AATAAA	-12	NA	50185900	50199591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50199115
transcript_64815.nic	chr22	-	366	3	ISM	ENSG00000128159.12	ENST00000491449.5	4044	16	7969	0	2196	0	3prime_fragment	FALSE	canonical	3	168	junction_2	46	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGCAGCTCTCTCT	8776	False	NA	-7	True	AATAAA	-13	NA	50218220	50217693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_50217828_50217917_50218118_50218188
transcript_64816.nic	chr22	-	1517	11	ISM	ENSG00000188130.14	ENST00000215659.13	1778	12	347	2	-28	0	3prime_fragment	FALSE	canonical	3	165	junction_7	24.1495341569977	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	9162	False	NA	-5	True	AATAGA	-17	NA	50261336	50252902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166
transcript_64819.known	chr22	-	2593	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	0	0	0	multi-exon	FALSE	canonical	1	89	junction_12	63.929509997502	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-4	True	NA	-23	True	AATAAA	-20	NA	50507702	50502948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_6482.known	chr1	+	737	3	FSM	ENSG00000277147.7	ENST00000621156.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	67	False	NA	17	True	AATAAA	-31	NA	149607408	149647624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149607555_149646598_149646946_149647380
transcript_64824.known	chr22	-	2658	14	FSM	ENSG00000100258.18	ENST00000216080.5	2658	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	92.3542831138191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCCTGGTGCTGCT	14	False	NA	-25	True	AATAAA	-18	NA	50507684	50502950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507121_50507581
transcript_64825.known	chr22	+	1996	20	FSM	ENSG00000025770.19	ENST00000299821.15	1996	20	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_15	57.8271854710342	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	20	True	NA	24	True	AATAAA	-18	NA	50508259	50523472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
transcript_6483.nic	chr1	+	1019	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	-66	-5	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	4.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	48	False	NA	12	True	AATAAA	-26	NA	149607240	149647619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_149607555_149646598_149647065_149647380
transcript_64835.known	chr22	+	1388	9	FSM	ENSG00000025770.19	ENST00000395698.7	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	16.7032930884901	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACAGAGGAAATGTTA	3	True	NA	10	True	ATTAAA	-16	NA	50508242	50519752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189
transcript_64836.known	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-12	True	NA	-5	True	ATTAAA	-15	NA	50525598	50523567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50524425_50525471
transcript_64837.known	chr22	-	462	3	FSM	ENSG00000217442.4	ENST00000406915.4	462	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGGACCTCTTCTCTC	2	True	NA	-3	True	AATAAA	-17	NA	50562919	50551111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50551403_50556296_50556406_50562857
transcript_64838.known	chr22	-	1474	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_10	85.1920770964061	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-25	True	NA	-12	True	AATAAA	-18	NA	50582849	50578962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_64841.nic	chr22	-	1248	10	ISM	ENSG00000100288.20	ENST00000406938.3	1474	11	426	0	-3	0	3prime_fragment	FALSE	canonical	3	185	junction_9	72.6816158595185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	563	False	NA	-12	True	AATAAA	-18	NA	50582423	50578962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248
transcript_64842.known	chr22	-	1856	10	FSM	ENSG00000100288.20	ENST00000481673.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_9	77.7059986244448	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-21	True	NA	-12	True	AATAAA	-18	NA	50582845	50578962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50582358_50582557
transcript_64848.known	chr22	-	2662	19	FSM	ENSG00000205560.13	ENST00000395650.6	2662	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	40.7406734006178	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTAGGTACCTGTGTT	4531	False	NA	-10	True	AATAAA	-25	NA	50578455	50569083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774_50577935_50578385
transcript_64852.known	chr22	-	1824	9	FSM	ENSG00000100299.18	ENST00000395619.3	1824	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	15.6983279364396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGATGTGACAATTCGT	-24	True	NA	-33	True	NA	NA	NA	50628159	50625032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627990
transcript_64855.known	chr22	-	4294	8	FSM	ENSG00000100299.18	ENST00000216124.10	4294	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	14.5377762665241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGTGAGGGTTCTGTT	-17	True	NA	-1	True	AATAAA	-19	NA	50628152	50622753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555
transcript_64856.known	chr22	-	1650	8	FSM	ENSG00000100299.18	ENST00000453344.6	1650	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	7.4230748895809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTGACAATTCGTCCAA	-38	True	NA	-29	True	NA	NA	NA	50628173	50625028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627945
transcript_6486.known	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	114	False	NA	3	True	AATAAA	-17	NA	149607306	149647610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149607555_149646598
transcript_64861.known	chr22	-	2401	10	FSM	ENSG00000079974.19	ENST00000395595.8	2401	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	62.8507933300943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-9	True	NA	-32	True	AGTAAA	-17	NA	50783636	50767505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783500
transcript_64865.known	chr22	-	2169	9	FSM	ENSG00000079974.19	ENST00000395598.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	58.4335894413479	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-6	True	NA	-32	True	AGTAAA	-17	NA	50783659	50767505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769454_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
transcript_64866.nic	chr22	-	2616	9	ISM	ENSG00000079974.19	ENST00000395595.8	2401	10	-1	0	-1	0	intron_retention	FALSE	canonical	3	46	junction_8	54.0647759636531	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-10	True	NA	-32	True	AGTAAA	-17	NA	50783637	50767505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038
transcript_64867.known	chr22	-	2140	9	FSM	ENSG00000079974.19	ENST00000354869.8	2153	9	15	-2	9	2	multi-exon	FALSE	canonical	3	55	junction_8	51.8325127212641	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAAATGTATGTGCTT	6	True	NA	-30	True	AGTAAA	-19	NA	50783621	50767503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_6487.known	chr1	+	1547	2	FSM	ENSG00000270882.3	ENST00000618193.1	1547	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATCTGCTGAGAAATGT	11	False	NA	NA	False	AATAAA	-28	NA	149832667	149834484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149833865_149834134
transcript_64871.known	chr22	+	1112	4	FSM	ENSG00000184319.17	ENST00000496652.5	1112	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.6015872373189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50756947	50789186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50757327_50783119_50783295_50785172_50785294_50788749
transcript_64874.nic	chr22	+	573	4	FSM	ENSG00000184319.17	ENST00000693416.1	731	4	-24	182	0	-7	multi-exon	FALSE	canonical	2	15	junction_3	63.4192399828317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	50783739	50789172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50788749_50788799_50788894
transcript_64877.known	chr22	+	658	4	FSM	ENSG00000184319.17	ENST00000423888.6	732	4	2	72	2	-7	multi-exon	FALSE	canonical	2	15	junction_3	26.5622957508487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	4	True	NA	NA	False	ATTAAA	-14	NA	50783811	50789172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784022_50785172_50785294_50788749_50788799_50788894
transcript_64879.nic	chr22	+	683	3	FSM	ENSG00000184319.17	ENST00000689105.1	836	3	-15	168	0	0	multi-exon	FALSE	canonical	3	45	junction_2	58.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50783739	50789186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50788749
transcript_64880.nnic	chr22	+	541	3	FSM	ENSG00000184319.17	ENST00000686648.1	521	3	-24	4	0	0	multi-exon	FALSE	canonical	3	13	junction_2	74.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50783739	50789186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50788891
transcript_64881.known	chr22	+	1009	3	FSM	ENSG00000184319.17	ENST00000462238.6	1131	3	17	105	2	0	multi-exon	FALSE	canonical	3	162	junction_1	27	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	NA	False	NA	NA	False	AAGAAA	-20	NA	50783756	50799434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50783865_50785172_50785294_50798654
transcript_64885.nnic	chr22	+	1239	3	NIC	ENSG00000184319.17	novel	834	3	NA	NA	-1	0	intron_retention	FALSE	canonical	3	17	junction_1	14	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50783743	50789186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr22_+_50784425_50785172_50785294_50788749
transcript_64888.known	chr22	+	2987	3	FSM	ENSG00000184319.17	ENST00000480246.2	3083	3	96	0	-13	0	multi-exon	FALSE	canonical	3	16	junction_1	100	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGACTCAGGTATTT	54	False	NA	NA	False	ATTAAA	-20	NA	50783861	50801309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784073_50785172_50785294_50798654
transcript_6489.known	chr1	+	942	2	FSM	ENSG00000270882.3	ENST00000614272.1	942	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	13	False	NA	NA	False	AATAAA	-20	NA	149832669	149834631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149833115_149834134
transcript_64891.nic	chr22	+	814	3	FSM	ENSG00000184319.17	ENST00000686213.1	784	3	-23	-7	0	0	multi-exon	FALSE	canonical	3	45	junction_2	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50783765	50789186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784022_50785172_50785294_50788749
transcript_64892.known	chr22	+	1080	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	105	99	-25	7	multi-exon	FALSE	canonical	3	80	junction_1	68	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGTGAATATTTATT	42	False	NA	NA	False	AAGAAA	-27	NA	50783849	50799441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50784022_50785172_50785294_50798654
transcript_64899.known	chr22	+	469	1	FSM	ENSG00000184319.17	ENST00000427528.1	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGGCTAAC	NA	False	NA	5	True	NA	NA	NA	50798654	50799123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_+_50798700_50799100
transcript_6490.known	chr1	-	549	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-30	14	30	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	7567	False	NA	NA	False	AATAAA	-17	NA	149842736	149842187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149842200_149842700
transcript_64900.known	chr22	-	2341	10	FSM	ENSG00000079974.19	ENST00000395593.7	2341	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	86.9878663313964	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	11	True	NA	-32	True	AGTAAA	-17	NA	50783642	50767505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr22_-_50768875_50769040_50769125_50769424_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
transcript_64903.nnic	chr3	-	509	4	Antisense	novelGene_ENSG00000134115.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGTTGAGCTAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	1235866	1182243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_1182357_1183005_1183102_1194304_1194425_1235686
transcript_6491.known	chr1	+	564	1	FSM	ENSG00000288859.1	ENST00000607355.3	534	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	0	True	NA	NA	False	AATAAA	-17	NA	149851060	149851624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149851100_149851600
transcript_64911.known	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	103.93387320792	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	NA	False	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
transcript_6492.known	chr1	-	1132	1	FSM	ENSG00000270276.3	ENST00000579512.3	396	1	-51	-685	-51	685	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATGAGATAACTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	149861210	149860078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149860100_149861200
transcript_6493.known	chr1	+	1234	1	FSM	ENSG00000264207.1	ENST00000577853.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCCTGTTTAATC	8661	False	NA	NA	False	TTTAAA	-5	NA	149861270	149862504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149861300_149862500
transcript_64931.known	chr3	+	2180	8	FSM	ENSG00000072756.17	ENST00000280591.10	2180	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	123.774811983831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	-1	True	NA	6	True	AATAAA	-15	NA	3126951	3149023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146564_3147449_3147704_3147905
transcript_64932.known	chr3	+	2252	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	40.4646482142381	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	-13	True	NA	6	True	AATAAA	-15	NA	3126939	3149023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_6494.known	chr1	-	2194	1	FSM	ENSG00000184678.11	ENST00000369155.4	2224	1	30	0	30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTGGATTCTTTTA	1312	False	NA	-11	True	AATAAA	-19	NA	149886652	149884458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149884500_149886700
transcript_64940.known	chr3	+	1113	7	FSM	ENSG00000072756.17	ENST00000651093.1	1113	7	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_5	130.212219941994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	10	True	NA	NA	False	AAGAAA	-43	NA	3126962	3148101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
transcript_64941.known	chr3	+	1168	7	FSM	ENSG00000072756.17	ENST00000651352.1	1168	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	131.733843622493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	10	True	NA	NA	False	AAGAAA	-43	NA	3126962	3148101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_64943.nic	chr3	+	1524	5	ISM	ENSG00000072756.17	ENST00000651093.1	1113	7	-53	2583	-23	-2583	5prime_fragment	FALSE	canonical	3	275	junction_1	40.751533713469	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGATCTTGGATAA	NA	False	NA	NA	False	NA	NA	NA	3126909	3145518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583
transcript_64944.known	chr3	-	878	5	FSM	ENSG00000113851.16	ENST00000450014.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	63.4113554499508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTATCCTTGTTATT	21	False	NA	-8	True	AATAAA	-13	NA	3179674	3167429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_64946.known	chr3	-	1012	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	141.088624630053	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTGTGACATTTAGA	-6	True	NA	-19	True	AATAAA	-25	NA	3179701	3172175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_64949.known	chr3	+	854	4	FSM	ENSG00000072756.17	ENST00000420393.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	18.1903515328563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGGGAGCTTTTAAAG	27	False	NA	NA	False	NA	NA	NA	3126979	3130214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3127290_3127945_3128019_3129013_3129189_3129918
transcript_6495.known	chr1	+	494	1	FSM	ENSG00000184260.6	ENST00000331380.4	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTCAAAAAAAGAGCTA	-3	True	NA	46	True	NA	NA	NA	149886917	149887411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149886900_149887400
transcript_64950.known	chr3	+	987	3	FSM	ENSG00000072756.17	ENST00000339437.11	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	-13	True	NA	NA	False	AATAAA	-13	NA	3126939	3130679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3126991_3129013_3129189_3129918
transcript_64952.known	chr3	+	1935	3	FSM	ENSG00000072756.17	ENST00000402675.5	1935	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3	True	NA	NA	False	AATAAA	-13	NA	3127019	3130679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3128019_3129013_3129189_3129918
transcript_64953.known	chr3	+	2147	7	FSM	ENSG00000072756.17	ENST00000650839.1	2147	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	138.574488593279	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATATTCTCTAAAGA	1948	False	NA	0	True	ATTAAA	-14	NA	3129013	3148955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146415_3146624_3147449_3147704_3147905
transcript_64954.known	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	120.336359867551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	21	False	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_64955.known	chr3	-	2147	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	20.1117969112658	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCGTCATCAGCTTCT	-10	True	NA	-13	True	AATAAA	-19	NA	4467269	4361145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_64956.known	chr3	+	5960	2	FSM	ENSG00000175928.6	ENST00000319331.4	5960	2	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTTCTATTTATTCAA	-3	True	NA	27	True	NA	NA	NA	3799430	3849834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_3799920_3844363
transcript_64958.known	chr3	+	1657	4	FSM	ENSG00000170364.13	ENST00000425863.5	1657	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.0410262117139	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	3	True	NA	14	True	AATAAA	-16	NA	4303370	4317265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4312897_4313230_4313646_4313762_4316211
transcript_64959.known	chr3	+	1676	4	FSM	ENSG00000170364.13	ENST00000413809.5	1676	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.4449494897321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	-6	True	NA	14	True	AATAAA	-16	NA	4303331	4317265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4312897_4313230_4313666_4313762_4316211
transcript_6496.known	chr1	+	891	2	FSM	ENSG00000178096.9	ENST00000369152.6	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	-4	True	NA	NA	False	ATTAAA	-17	NA	149899567	149900795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149899673_149900009
transcript_64963.known	chr3	+	2443	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-65	-302	-28	302	multi-exon	FALSE	canonical	3	49	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	NA	False	NA	NA	False	AATAAA	-45	NA	4303303	4317567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4312897_4313762_4316211
transcript_64965.known	chr3	+	1359	3	FSM	ENSG00000170364.13	ENST00000425046.1	1359	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	23.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	-1	True	NA	14	True	AATAAA	-16	NA	4303336	4317265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4313646_4313762_4316211
transcript_64967.nnic	chr3	+	2148	3	NIC	ENSG00000170364.13	novel	701	3	NA	NA	-21	-52	intron_retention	FALSE	canonical	2	7	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGGTTC	195	False	NA	7	True	AATAAA	-26	NA	4303586	4317213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_4303869_4312897_4313762_4316211
transcript_64969.known	chr3	+	701	3	FSM	ENSG00000170364.13	ENST00000358950.4	701	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGGAAAGGTGAAAAAG	-15	True	NA	NA	False	NA	NA	NA	4303607	4316536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303869_4313646_4313762_4316211
transcript_6497.known	chr1	+	743	2	FSM	ENSG00000178096.9	ENST00000476344.1	743	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTTAATGGACTGCT	6	True	NA	NA	False	ATTAAA	-20	NA	149899605	149900798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149899673_149900122
transcript_64970.known	chr3	+	1671	2	FSM	ENSG00000170364.13	ENST00000430981.1	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTCCTACTTAATT	-7	True	NA	25	True	AATAAA	-25	NA	4303360	4314402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_4303527_4312897
transcript_64971.nnic	chr3	+	1225	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-28	-52	combination_of_known_splicesites	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGGTTC	NA	False	NA	7	True	AATAAA	-26	NA	4303303	4317213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_4303527_4316211
transcript_64972.nnic	chr3	+	1277	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	NA	False	NA	14	True	AATAAA	-16	NA	4303303	4317265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_4303527_4316211
transcript_64973.nnic	chr3	+	1780	2	NIC	ENSG00000170364.13	novel	668	2	NA	NA	-21	-7	intron_retention	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGACTCCTGCGTCCTA	195	False	NA	18	True	AATAAA	-18	NA	4303586	4314395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_4303869_4312897
transcript_64974.known	chr3	+	2933	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	19.9833263830958	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	-24	True	NA	14	True	AATAAA	-16	NA	5122291	5180911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_64978.known	chr3	+	1641	7	FSM	ENSG00000134108.14	ENST00000455168.5	1641	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	87.86115941264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTGACTTTTTATATC	-24	True	NA	19	True	ATTAAA	-25	NA	5122291	5179646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_5122589_5170502_5170557_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_6498.known	chr1	+	811	2	FSM	ENSG00000178096.9	ENST00000369150.1	811	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTTGTAAGGGATG	-3	True	NA	NA	False	NA	NA	NA	149899625	149900548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_149899731_149899842
transcript_64982.known	chr3	-	524	2	FSM	ENSG00000227110.7	ENST00000455811.2	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACAGAGCCCTAATCTT	38	False	NA	NA	False	GGGGCT	-6	NA	8501629	8498484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_8498850_8501470
transcript_64983.nic	chr3	+	1747	7	NIC	ENSG00000071282.12	novel	8284	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	41.8276888622304	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTATCTAATTATTTAC	3	True	NA	45	True	AATAAA	-22	NA	8501887	8568125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_8501981_8514924_8514996_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_64984.known	chr3	+	8284	6	FSM	ENSG00000071282.12	ENST00000157600.8	8284	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	7.52063827078527	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTCCAGAGGGTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	8501822	8574668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_64985.known	chr3	+	1059	5	FSM	ENSG00000071282.12	ENST00000456506.2	1059	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	38.9831694452875	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGTGGTGGTAGATCC	3	True	NA	NA	False	AATATA	-31	NA	8501887	8567764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_8501981_8532736_8532826_8548567_8548904_8565431_8565648_8567439
transcript_64986.known	chr3	+	1113	5	FSM	ENSG00000071282.12	ENST00000454244.4	1113	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	38.2295697072306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACAGGATCCCACCGAG	0	True	NA	NA	False	NA	NA	NA	8501857	8567621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_8501981_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_6499.known	chr1	-	4378	13	FSM	ENSG00000159164.10	ENST00000369146.8	4378	13	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	21.3261706725693	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATACCTGCTTCTGTG	-3	True	NA	-7	True	AATAAA	-28	NA	149917844	149903317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149905198_149905879_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_64999.known	chr3	-	5857	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	22.2142346755908	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCTAGTAAGTGCCT	-15	True	NA	1	True	AATAAA	-14	NA	8963472	8877074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_65.known	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1611	junction_5	2170.82762097777	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
transcript_650.known	chr1	+	571	6	FSM	ENSG00000251503.8	ENST00000602787.6	571	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	111.755089369567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGACTTTCCTCGCTT	-24	True	NA	NA	False	TTTAAA	-38	NA	10430434	10451411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_65002.nic	chr3	-	524	5	ISM	ENSG00000070950.10	ENST00000413832.1	581	6	330	-191	0	-54	3prime_fragment	FALSE	canonical	3	122	junction_1	19.6770805761424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAGCCCTCAAAAAGAG	14	True	NA	NA	False	AATAAA	-5	NA	8963443	8941604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_65003.known	chr3	-	592	4	FSM	ENSG00000070950.10	ENST00000469793.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	7.34846922834953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCCTGCCCAAGCCC	14	True	NA	NA	False	NA	NA	NA	8963443	8946951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_8947291_8948508_8948571_8958919_8959002_8963334
transcript_65004.nic	chr3	-	3339	3	NIC	ENSG00000070950.10	novel	592	4	NA	NA	6	1476	intron_retention	FALSE	canonical	3	165	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAGATGGAAACA	5768	False	NA	NA	False	NA	NA	NA	8963496	8945475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_8948571_8958919_8959002_8963334
transcript_65007.known	chr3	+	3754	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	98.1960749511021	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	-12	True	NA	20	True	AATAAA	-21	NA	9363053	9386791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_65010.nnic	chr3	+	1956	10	NNC	ENSG00000134077.16	novel	3961	10	NA	NA	-10	-79	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	118.539257444762	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTAAGGCTCTTCATC	-25	True	NA	34	True	AAAAAG	-33	NA	9363040	9384791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_9363317_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_65011.nnic	chr3	+	2035	10	NNC	ENSG00000134077.16	novel	2390	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	118.539257444762	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	-25	True	NA	12	True	TTTAAA	-18	NA	9363040	9384870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_9363317_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_65013.known	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	69.1339726389241	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	-14	True	NA	20	True	AATAAA	-21	NA	9363051	9386791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_65017.nic	chr3	+	2158	10	NIC	ENSG00000134077.16	novel	2390	10	NA	NA	-3	-79	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	111.315367811956	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTAAGGCTCTTCATC	-18	True	NA	34	True	AAAAAG	-33	NA	9363047	9384791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_9363526_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_65018.nic	chr3	+	2237	10	NIC	ENSG00000134077.16	novel	2390	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	111.315367811956	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	-18	True	NA	12	True	TTTAAA	-18	NA	9363047	9384870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_9363526_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_65020.known	chr3	+	2390	10	FSM	ENSG00000134077.16	ENST00000515662.6	2390	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.267326898627	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	32	False	NA	12	True	TTTAAA	-18	NA	9363097	9384870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9363729_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_65029.known	chr3	+	6931	23	FSM	ENSG00000168137.20	ENST00000402198.7	6931	23	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_21	112.695789225201	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGTCCAATTTTGTG	-11	True	NA	25	True	AATAAA	-33	NA	9397614	9478154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
transcript_6503.known	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1408	junction_3	156.466737679291	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-18	True	NA	-23	True	AATAAA	-18	NA	149927803	149923316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
transcript_65033.known	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	55.4182957154043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	1361	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
transcript_65042.nic	chr3	-	614	5	FSM	ENSG00000206573.10	ENST00000685076.1	550	5	-69	5	-7	0	multi-exon	FALSE	canonical	3	72	junction_1	31.4443953670602	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	1278	False	NA	-4	True	ATTAAA	-16	NA	9397511	9385794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9391678_9391827_9397423
transcript_65044.nic	chr3	-	588	5	NIC	ENSG00000206573.10	novel	550	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	53.0471488394994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	1278	False	NA	-4	True	ATTAAA	-16	NA	9397511	9385794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9385924_9388086_9388128_9390289_9390498_9391704_9391827_9397423
transcript_65051.nic	chr3	+	774	4	ISM	ENSG00000134077.16	ENST00000345094.7	3961	10	-11	15633	-10	59	5prime_fragment	FALSE	canonical	3	211	junction_1	85.4413379004696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAGCGCAAAAAGATAAA	-25	True	NA	-62	True	AAAAAG	-7	NA	9363040	9371158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059
transcript_65054.known	chr3	-	1897	4	FSM	ENSG00000206573.10	ENST00000481221.7	1897	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	37.5854581808798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	1315	False	NA	-30	True	TATAAA	-37	NA	9397474	9388873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391678_9391827_9395505_9395580_9397423
transcript_65055.known	chr3	-	667	4	FSM	ENSG00000206573.10	ENST00000467069.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	59.0987873536054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGATCTTGAATAGTG	1360	False	NA	NA	False	NA	NA	NA	9397429	9389491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9389797_9390289_9390498_9391678_9391827_9397423
transcript_6506.known	chr1	+	2328	15	FSM	ENSG00000136631.15	ENST00000644510.2	2328	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	18.0311521811445	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	2	True	NA	12	True	AATAAA	-22	NA	150067775	150145329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_65065.known	chr3	-	1878	3	FSM	ENSG00000206573.10	ENST00000522525.6	1878	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	26	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTGGTTGAATCTG	1285	False	NA	-5	True	ATTAAA	-19	NA	9397504	9388848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391678_9391827_9397423
transcript_65067.known	chr3	-	2095	3	FSM	ENSG00000206573.10	ENST00000664441.2	2116	3	0	21	0	0	multi-exon	FALSE	canonical	3	29	junction_1	60.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-2	True	NA	-30	True	TATAAA	-37	NA	9397494	9388873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391426_9391827_9397423
transcript_65068.known	chr3	-	1809	3	FSM	ENSG00000206573.10	ENST00000520447.1	1809	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTATTGTATTAAATATT	-3	True	NA	-39	True	TATAAA	-28	NA	9397495	9388882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9390498_9391704_9391827_9397423
transcript_65082.known	chr3	-	670	3	FSM	ENSG00000206573.10	ENST00000518437.3	1968	3	0	1298	0	35	multi-exon	FALSE	canonical	1	6	junction_2	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGAGTGAGACCTTGC	1285	False	NA	NA	False	NA	NA	NA	9397504	9391311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9391827_9395505_9395580_9397423
transcript_65083.known	chr3	-	484	2	FSM	ENSG00000254485.5	ENST00000466431.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	87	False	NA	NA	False	AATAAA	-19	NA	9362941	9349684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9350067_9362839
transcript_65084.known	chr3	-	1831	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	53	1161	1	0	multi-exon	FALSE	canonical	3	150	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	2	True	NA	-15	True	AATAAA	-15	NA	9397441	9390013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9391827_9397423
transcript_65089.known	chr3	-	227	2	FSM	ENSG00000254485.5	ENST00000517687.1	227	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGTGTTCTAATGGAA	50	False	NA	NA	False	AATAAA	-18	NA	9362978	9355771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9355860_9362839
transcript_6509.known	chr1	+	2192	15	FSM	ENSG00000136631.15	ENST00000642919.1	2192	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	49.6228633940905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTACCATGTTTCTTT	39	True	NA	NA	False	NA	NA	NA	150067812	150145210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067951_150068609_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_65090.known	chr3	+	2452	19	FSM	ENSG00000163719.20	ENST00000296003.9	2452	19	0	0	0	0	multi-exon	TRUE	canonical	3	213	junction_17	130.310514721236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	16	True	NA	24	True	AATAAA	-24	NA	9649504	9702393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
transcript_65091.known	chr3	+	2105	17	FSM	ENSG00000163719.20	ENST00000351233.9	2105	17	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_16	125.464247272878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTTGTGTCATCATT	23	True	NA	20	True	AATAAA	-20	NA	9649511	9702389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9701789
transcript_65092.nic	chr3	+	1850	17	ISM	ENSG00000144550.14	ENST00000383832.8	2042	21	1399	0	1399	0	3prime_fragment	TRUE	canonical	0	0	junction_1	6.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	1396	False	NA	7	True	AATAAA	-17	NA	9705231	9729908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_9705501_9705717_9705721_9705986_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
transcript_65096.nnic	chr3	+	1985	16	NNC	ENSG00000144550.14	novel	2042	21	NA	NA	1400	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.66627449623354	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	1397	False	NA	7	True	AATAAA	-17	NA	9705232	9729908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_9705501_9705847_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
transcript_65098.known	chr3	+	1746	15	FSM	ENSG00000163719.20	ENST00000414996.1	1746	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	177.189812325192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTCTTGTGTCATCA	5214	False	NA	18	True	AATAAA	-18	NA	9668742	9702387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9697710_9697867_9701789
transcript_65099.known	chr3	-	1974	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	41.1855557204222	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAGTCTTTGAATGTC	-25	True	NA	-4	True	AATAAA	-27	NA	9792473	9779966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
transcript_65101.nic	chr3	-	1306	9	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	209.64359637251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	9736	False	NA	-61	True	AATAAA	-14	NA	9844050	9837848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9838208_9838984_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_65105.nnic	chr3	-	1293	9	NNC	ENSG00000156990.14	novel	1225	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	215.63681127071	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-5	True	NA	-61	True	AATAAA	-14	NA	9844010	9837848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843815
transcript_65106.known	chr3	-	1225	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	77.8488118085305	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-11	True	NA	-61	True	AATAAA	-14	NA	9844016	9837848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_65107.known	chr3	-	907	9	FSM	ENSG00000156990.14	ENST00000427174.5	907	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	218.874250427043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGCCCAGCTGCCC	19	True	NA	NA	False	NA	NA	NA	9843986	9838164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9838208_9839031_9839172_9840183_9840336_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_65108.known	chr3	+	1948	8	FSM	ENSG00000114026.22	ENST00000449570.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	82.4670620704449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGCAGTTTAACAAAAT	13	False	NA	NA	False	AAAAAG	-41	NA	9750071	9766540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9759233_9759287_9765808
transcript_6511.nic	chr1	+	1887	14	NIC	ENSG00000136631.15	novel	2328	15	NA	NA	-4	5529	combination_of_known_junctions	FALSE	canonical	2	15	junction_13	50.1603346439957	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTCCATGTAACT	-2	True	NA	NA	False	GATAAA	-17	NA	150067771	150099157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150098849
transcript_65115.known	chr3	-	1005	8	FSM	ENSG00000156990.14	ENST00000424438.5	1005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	282.19489574348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCCTCCCTCTGTTCCT	9844	False	NA	NA	False	GGGGCT	-10	NA	9843942	9838019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843724
transcript_65117.nic	chr3	-	1119	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	208.731836555511	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	9736	False	NA	-61	True	AATAAA	-14	NA	9844050	9837848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_65118.known	chr3	+	1655	7	FSM	ENSG00000114026.22	ENST00000302003.11	1655	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	63.6832439151427	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	-31	True	NA	19	True	AATAAA	-23	NA	9749943	9757407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757043
transcript_65119.known	chr3	+	1630	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	41.424630354416	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	-23	True	NA	19	True	AATAAA	-23	NA	9749951	9757407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
transcript_65120.known	chr3	+	2220	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	61.9015795885336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	-31	True	NA	93	True	NA	NA	NA	9749943	9766737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
transcript_65121.known	chr3	+	957	7	FSM	ENSG00000241553.13	ENST00000417500.5	957	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	400.158892052756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGGGCCGGGACAGA	-9	True	NA	-46	True	NA	NA	NA	9793081	9806436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9793125_9797658_9797778_9799878_9800068_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_65123.known	chr3	+	1815	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	20.1454709550311	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	6	True	NA	-11	True	NA	NA	NA	9749980	9757377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
transcript_65126.known	chr3	+	1433	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	178.834672253453	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGCTGTGTGTGTGT	-9	True	NA	39	True	ATTAAA	-31	NA	9793081	9807101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_65127.known	chr3	+	926	6	FSM	ENSG00000241553.13	ENST00000433034.1	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	352.430078171543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACGTTATTGGTTG	26	False	NA	90	True	TTTAAA	-33	NA	9793116	9806572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9793182_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_65131.known	chr3	+	1950	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	79.6884558766199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	-31	True	NA	24	True	AATAAA	-33	NA	9749943	9766668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
transcript_65134.known	chr3	+	1069	4	FSM	ENSG00000114026.22	ENST00000383826.9	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	91.131163105103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGCTTACTAGCACTT	28	False	NA	NA	False	NA	NA	NA	9750086	9766112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9765808
transcript_65137.known	chr3	-	1178	4	FSM	ENSG00000156990.14	ENST00000433972.1	1178	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_3	64.8296914144197	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGTGTGCAGTCATTT	9727	False	NA	-12	True	AATAGA	-15	NA	9844059	9841256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
transcript_65139.known	chr3	-	807	3	FSM	ENSG00000156990.14	ENST00000433555.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATGGCAGCTGCAATA	9810	False	NA	NA	False	NA	NA	NA	9843976	9841407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9842083_9842198_9842244_9843889
transcript_65140.known	chr3	-	336	1	FSM	ENSG00000269886.1	ENST00000602768.1	336	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGGCTAATATTTATTG	NA	False	NA	NA	False	AATAAA	-24	NA	9813097	9812761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9812800_9813100
transcript_65141.known	chr3	+	693	1	FSM	ENSG00000214021.17	ENST00000602338.1	693	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTGTGGTCCATCAC	1390	False	NA	NA	False	AGTAAA	-18	NA	9820348	9821041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9820300_9821000
transcript_65142.known	chr3	-	1305	7	FSM	ENSG00000187288.12	ENST00000336832.7	1305	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTTCTTTGCCTGTGT	0	True	NA	NA	False	AATAAA	-14	NA	9880253	9866713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9867297_9869881_9870070_9870163_9870323_9877065_9877220_9878433_9878512_9878941_9879055_9880223
transcript_65143.known	chr3	-	1192	6	FSM	ENSG00000187288.12	ENST00000675828.1	1192	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTTCTTTGCCTGTGT	0	True	NA	NA	False	AATAAA	-14	NA	9880253	9866713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9867297_9869881_9870070_9870163_9870323_9877065_9877220_9878433_9878512_9880223
transcript_65144.known	chr3	+	1637	2	FSM	ENSG00000171135.15	ENST00000647897.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	1	True	NA	6	True	ATTAAA	-25	NA	9890609	9894349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9890812_9892914
transcript_65145.known	chr3	+	1313	2	FSM	ENSG00000171135.15	ENST00000489724.2	1313	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGTGTTGCTTGAAA	0	True	NA	64	True	GGGGCT	-12	NA	9890573	9893883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9890812_9892808
transcript_65149.known	chr3	+	1994	12	FSM	ENSG00000163703.20	ENST00000326434.9	1994	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	39.496835316263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	14	True	NA	22	True	AATAAA	-23	NA	9933855	9945032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_65152.known	chr3	+	1917	11	FSM	ENSG00000163703.20	ENST00000673737.2	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	35.5275949087466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCATGCCAGCTGTCAT	-17	True	NA	NA	False	NA	NA	NA	9933824	9945196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941017_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_65154.known	chr3	+	2164	11	FSM	ENSG00000163703.20	ENST00000684493.1	2164	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	24.2299401567565	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCTTTCCTCGGAGTCC	NA	False	NA	28	True	AATAAA	-40	NA	9933804	9945413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_65156.known	chr3	+	2196	11	FSM	ENSG00000163703.20	ENST00000452070.6	2196	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	23.7210876647763	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGCAACCTTTCCTC	-8	True	NA	21	True	AATAAA	-33	NA	9933833	9945406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_65158.known	chr3	+	2020	10	FSM	ENSG00000163703.20	ENST00000673935.2	2020	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	37.1686181185083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATATTCAATAAAAGTG	NA	False	NA	-27	True	ATTAAA	-36	NA	9933809	9945358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9943076_9943173_9943380_9943516_9944364
transcript_65166.known	chr3	+	2198	2	FSM	ENSG00000163703.20	ENST00000684659.1	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCATTTTCTCTTTT	-3	True	NA	4	True	AATAAA	-19	NA	9933838	9936258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9934613_9934834
transcript_65167.known	chr3	+	2872	9	FSM	ENSG00000163703.20	ENST00000467713.6	2872	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	26.1817565300726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAGGCATCAGTCTTA	-8	True	NA	15	True	AATAAA	-16	NA	9933833	9945025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_65169.known	chr3	-	1475	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGTCATTTGCC	-1	True	NA	3	True	AATAAA	-19	NA	9952390	9948579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_9948914_9949100_9950173_9952321
transcript_6517.known	chr1	+	382	2	FSM	ENSG00000136631.15	ENST00000643611.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	25	True	NA	NA	False	AATAAA	-16	NA	150067798	150068859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067951_150068629
transcript_6518.known	chr1	+	2350	16	FSM	ENSG00000136631.15	ENST00000644526.1	2350	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	66.5456902352729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	4	True	NA	12	True	AATAAA	-22	NA	150067847	150145329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150142837_150142932_150144708
transcript_65180.known	chr3	+	2882	2	FSM	ENSG00000180385.9	ENST00000326237.3	2882	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	1	True	NA	NA	False	NA	NA	NA	9986910	10005244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_9987265_10002716
transcript_65181.known	chr3	-	942	3	FSM	ENSG00000186162.11	ENST00000335507.10	1833	3	6	885	6	-885	multi-exon	FALSE	canonical	0	0	junction_1	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTTTCTTTGAGACA	-22	True	NA	NA	False	NA	NA	NA	10026360	10015122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10015527_10023529_10023748_10026040
transcript_65182.known	chr3	-	854	3	FSM	ENSG00000186162.11	ENST00000424471.2	1136	3	18	264	9	-263	multi-exon	FALSE	canonical	3	10	junction_1	26	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTGGCCAAAGGAGAA	-19	True	NA	NA	False	GGGGCT	-12	NA	10026357	10017752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10018072_10023529_10023748_10026040
transcript_65183.known	chr3	-	1088	3	FSM	ENSG00000186162.11	ENST00000424691.2	1130	3	30	12	1	-7	multi-exon	FALSE	canonical	3	46	junction_1	8	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTATCTTTGCCTGTGT	26	False	10026391	-7	True	AATAAA	-11	NA	10026365	10017496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10018072_10023559_10023748_10026040
transcript_65184.known	chr3	-	1107	2	FSM	ENSG00000186162.11	ENST00000445082.1	1107	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATTGAATTCATTAA	12	True	NA	NA	False	AAAAAG	-12	NA	10026326	10022926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10023748_10026040
transcript_65185.known	chr3	-	1794	3	FSM	ENSG00000186162.11	ENST00000432401.6	1813	3	18	1	9	0	multi-exon	FALSE	canonical	1	2	junction_1	30	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATCATATAGTCTTT	-19	True	NA	NA	False	ATTAAA	-17	NA	10026357	10014237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10015527_10023559_10023748_10026040
transcript_65186.known	chr3	+	5185	44	FSM	ENSG00000144554.13	ENST00000419585.5	5185	44	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	23.989812151705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	50	False	NA	20	True	AATAAA	-16	NA	10026498	10101930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_65187.nic	chr3	+	2811	27	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-62	28966	0	0	5prime_fragment	FALSE	canonical	3	35	junction_1	20.1159729285935	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGGAAAAATAGGTA	-12	True	NA	16	True	NA	NA	NA	10026436	10072964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870
transcript_6519.nic	chr1	+	1392	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	-216	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	112.329159170716	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCATTGCTCTTGCTGAT	53	False	NA	7	True	GATAAA	-42	NA	150149699	150159628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_65190.nic	chr3	+	1879	17	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-62	52314	0	112	5prime_fragment	FALSE	canonical	3	35	junction_1	23.5921564031353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTGTTAATTCATTCA	-12	True	NA	NA	False	AATAAA	-15	NA	10026436	10049616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373
transcript_65193.known	chr3	+	5096	44	FSM	ENSG00000144554.13	ENST00000675286.1	5096	44	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_1	20.9290955763533	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTGCCTCATTTATC	-12	True	NA	22	True	AATAAA	-18	NA	10026436	10101932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_65196.nnic	chr3	+	974	4	NNC	ENSG00000254999.4	novel	1150	3	NA	NA	-32	-273	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	883.430560686892	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGACTGCTGTGATTAT	NA	False	NA	21	True	AATAAA	-14	NA	10115642	10126917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10115820_10118905_10118971_10125625_10125709_10126268
transcript_65198.known	chr3	+	1150	3	FSM	ENSG00000254999.4	ENST00000530758.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	8	2144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCTTACAGTCTTTT	-5	True	NA	20	True	AATAAA	-21	NA	10115674	10127190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10115820_10125625_10125709_10126268
transcript_6520.known	chr1	+	2114	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	25.810075552001	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTTCTCATTCCTAG	20	True	NA	4	True	ATTAAA	-16	NA	150149915	150160065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_65202.nnic	chr3	+	1944	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-24	True	NA	12	True	ATTAAA	-20	NA	10141777	10153667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150923_10153392
transcript_65204.nnic	chr3	+	2022	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	0	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGAAGTTCCTATTTCAA	-24	True	NA	18	True	ATTAAA	-19	NA	10141777	10153580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_65205.nnic	chr3	+	2109	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-24	True	NA	12	True	ATTAAA	-20	NA	10141777	10153667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_65208.known	chr3	+	4414	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-24	True	NA	12	True	ATTAAA	-20	NA	10141777	10153667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_10142188_10146513_10146637_10149786
transcript_6521.known	chr1	-	2989	7	FSM	ENSG00000143401.15	ENST00000616917.4	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	440.389978693128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAATTTGCAGTA	-2	True	NA	-58	True	AATAAA	-21	NA	150234678	150218554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150234578
transcript_65218.known	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	407.26267799651	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6	True	NA	-22	True	AATAAA	-17	NA	10321082	10300930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
transcript_65219.known	chr3	-	1479	10	FSM	ENSG00000157020.18	ENST00000383801.6	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	412.827677558112	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAACTAAATAAAGTCATA	4	True	NA	-52	True	NA	NA	NA	10321084	10300960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319317_10321049
transcript_65232.known	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_8	118.632244246663	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-24	True	NA	-22	True	AATAAA	-17	NA	10321112	10300930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_65236.nic	chr3	-	1208	9	NIC	ENSG00000157020.18	novel	1603	9	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	283.562575765915	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	6459	False	NA	-41	True	ACTAAA	-2	NA	10321207	10300949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_65239.known	chr3	-	592	3	FSM	ENSG00000157020.18	ENST00000397101.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_2	164.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTAAGTCTTTAGTGCA	-24	True	NA	NA	False	NA	NA	NA	10321112	10314952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10315437_10318049_10318095_10321049
transcript_65240.known	chr3	-	883	5	FSM	ENSG00000157020.18	ENST00000397105.7	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_4	151.328079020385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATTCTTTACCCAACTT	-5	True	NA	NA	False	TATAAA	-4	NA	10321093	10311572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_65241.known	chr3	-	2374	6	FSM	ENSG00000157020.18	ENST00000479868.6	2374	6	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_5	42.780369329869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGCTGCGTTATCCT	7117	False	NA	-24	True	AATAAA	-15	NA	10313971	10300932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578
transcript_65242.known	chr3	-	1467	9	FSM	ENSG00000157020.18	ENST00000397109.7	1467	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_8	339.773086044201	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6625	False	NA	-22	True	AATAAA	-17	NA	10321041	10300930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320870
transcript_65244.known	chr3	+	4959	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	14.6599311133072	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	-9	True	NA	NA	False	AATAAA	-17	NA	11272415	11557665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_65245.known	chr3	+	2296	18	FSM	ENSG00000197548.13	ENST00000354956.9	2296	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	28.6908108940439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCTCCATGCAGTTT	-9	True	NA	44	True	NA	NA	NA	11272415	11555083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11426803_11426927_11554810
transcript_65249.known	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	33.4617318738884	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-1	True	NA	-2	True	AATAAA	-15	NA	11643915	11556068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
transcript_65258.nic	chr3	-	1545	9	NIC	ENSG00000144559.11	novel	1326	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	49	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGTGTTTGTTACTTT	NA	False	NA	-5	True	AATAAA	-20	NA	11846902	11790445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11844890_11845097_11846501
transcript_65262.known	chr3	-	1213	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	113	0	7	0	multi-exon	FALSE	canonical	3	98	junction_5	12.6248863401633	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	82	False	NA	-1	True	AATAAA	-24	NA	11846772	11790441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_65263.known	chr3	-	1297	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	40.5202281445809	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846919	11790441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_65267.known	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	4.26468052730799	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	19	True	NA	-23	True	CATAAA	-31	NA	12158912	12153067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
transcript_65269.known	chr3	-	3191	17	FSM	ENSG00000132155.14	ENST00000251849.9	3191	17	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_13	40.1593991955806	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	5	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_6527.known	chr1	-	3407	7	FSM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	0	0	0	multi-exon	TRUE	canonical	3	1129	junction_5	58.5775838809807	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-1	True	NA	-3	True	AATAAA	-24	NA	150236112	150218416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_65270.known	chr3	+	2383	13	FSM	ENSG00000154743.19	ENST00000680376.1	2383	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	44.5928338787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGAAACCTCCTCTC	NA	False	NA	NA	False	NA	NA	NA	12484434	12533478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12506707_12506836_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_65273.known	chr3	+	2062	13	FSM	ENSG00000154743.19	ENST00000681482.1	2062	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	33.7699529496596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGAAAATAATTTTGT	NA	False	NA	49	True	TTTAAA	-9	NA	12484420	12539658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_65278.known	chr3	+	2444	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	24.3324087525769	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-10	NA	12484420	12533653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_6528.known	chr1	-	3054	5	FSM	ENSG00000143401.15	ENST00000629042.2	3054	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_4	506.904021980493	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAGTGTATAGCATTC	-1	True	NA	-4	True	AATAAA	-23	NA	150236156	150218417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229115_150235732
transcript_65280.known	chr3	+	1912	12	FSM	ENSG00000154743.19	ENST00000446004.6	1912	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	36.7771937954906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCTGTAAATGGATTC	NA	False	NA	11	True	AATAAA	-13	NA	12484420	12539620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12539160
transcript_65283.known	chr3	+	2149	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	34.9502598153007	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	-3	True	NA	21	True	AATAAA	-24	NA	12484490	12533317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_65284.known	chr3	+	2753	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.5234379602473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-14	True	NA	NA	False	AATAGA	-15	NA	12484479	12533658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_65285.known	chr3	+	2373	11	FSM	ENSG00000154743.19	ENST00000679756.1	2373	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	36.5069856328895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTCCTGTCTCAAAAAAAA	NA	False	NA	NA	False	AATAGA	-4	NA	12484434	12533647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_65286.known	chr3	+	2358	11	FSM	ENSG00000154743.19	ENST00000415684.6	2358	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	36.337308651027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-16	NA	12484434	12533659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_65287.known	chr3	+	2107	10	FSM	ENSG00000154743.19	ENST00000681433.1	2107	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	38.207038327745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGCACATGCCTGTAA	NA	False	NA	NA	False	NA	NA	NA	12484434	12533520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_65290.known	chr3	+	1679	8	FSM	ENSG00000075975.17	ENST00000448482.1	1679	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7725166640322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTACCAAAGGAG	-15	True	NA	-46	True	AGTAAA	-25	NA	12557089	12582626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12557177_12568874_12568998_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_65294.known	chr3	+	1436	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	48.0465630635764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAACAACTAACAAACA	-18	True	NA	62	True	NA	NA	NA	12557086	12582503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_65296.nic	chr3	+	1582	6	ISM	ENSG00000154743.19	ENST00000680873.1	2151	12	-6	27485	-6	32	5prime_fragment	FALSE	canonical	3	81	junction_1	23.8361070647033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGCTTTATGTTGAT	NA	False	NA	NA	False	AATGAA	-26	NA	12484428	12505798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_65297.nic	chr3	+	2378	6	ISM	ENSG00000154743.19	ENST00000680873.1	2151	12	-6	26689	-6	828	5prime_fragment	FALSE	canonical	3	81	junction_1	23.8361070647033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCTAAAAGTGGCCTTC	NA	False	NA	NA	False	NA	NA	NA	12484428	12506594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_65299.known	chr3	+	1587	6	FSM	ENSG00000154743.19	ENST00000490981.2	1587	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	46.3706803918166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGGAGTTCGAGACCAG	13	False	NA	NA	False	NA	NA	NA	12484562	12505574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_653.nic	chr1	+	1369	6	Fusion	ENSG00000175279.22_ENSG00000241563.4	novel	914	5	NA	NA	-65	-339	multi-exon	FALSE	canonical	3	24	junction_5	111.293126472393	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	259	False	NA	15	True	AATAAA	-16	NA	10430717	10451659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_6530.known	chr1	+	1788	11	FSM	ENSG00000118298.12	ENST00000369111.9	1788	11	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_8	54.5945052180162	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	0	True	NA	28	True	ATTAAA	-15	NA	150257773	150265078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_65300.known	chr3	+	2913	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	24.1389208540896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	12484434	12505766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
transcript_65304.known	chr3	-	1124	4	FSM	ENSG00000225526.6	ENST00000564146.4	1124	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTATGGCTTTCCTTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	12545499	12539775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12540434_12541859_12542023_12543179_12543230_12545246
transcript_65309.known	chr3	-	555	4	FSM	ENSG00000144713.13	ENST00000457131.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	6921.4670089191	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGGCAGCTCATGTG	13	True	NA	-81	True	AAGAAA	-1	NA	12841544	12836101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141_12840342_12841493
transcript_6531.nnic	chr1	+	1704	11	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_2	111.013332532629	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	444	False	NA	28	True	ATTAAA	-15	NA	150257738	150265078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150258184_150260150_150260172_150261577_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_65310.known	chr3	-	620	4	FSM	ENSG00000144713.13	ENST00000435983.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	6928.99272782287	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGGCATCTTCCTTCC	12	True	NA	-29	True	AATAAA	-12	NA	12841545	12836049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141_12840354_12841493
transcript_65312.known	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	10561	junction_3	1992.09526769067	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-8	True	NA	-26	True	NA	NA	NA	12841565	12834484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
transcript_65313.known	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	14107	junction_1	565	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	28	True	NA	-39	True	AATAAA	-2	NA	12841529	12836059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_12836224_12839348_12839531_12840141
transcript_65315.known	chr3	+	2819	10	FSM	ENSG00000163517.15	ENST00000295757.8	2819	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	21.3148067702788	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	3	True	NA	7	True	AATAAA	-19	NA	13480305	13506416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_65322.known	chr3	+	967	6	FSM	ENSG00000163517.15	ENST00000404040.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	32.4382490279608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGGCAGAGCCTGTGTC	21	True	NA	NA	False	NA	NA	NA	13480323	13504882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13502883_13502981_13504093_13504273_13504467
transcript_65324.known	chr3	+	1021	6	FSM	ENSG00000163517.15	ENST00000425430.5	1021	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	36.372517097391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAGAATTGGAGAGGAC	3	True	NA	NA	False	NA	NA	NA	13480305	13504956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_13480350_13481245_13481395_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_65326.nic	chr3	+	1610	7	ISM	ENSG00000163520.14	ENST00000492059.5	4193	18	60167	-370	-2422	0	3prime_fragment	FALSE	canonical	3	178	junction_6	12.7366487830285	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGGTCCCTTTACT	NA	False	NA	6	True	TATAAA	-15	NA	13628906	13638404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
transcript_65327.known	chr3	-	1603	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	139.045156533968	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-21	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
transcript_65328.known	chr3	-	1433	3	FSM	ENSG00000163528.13	ENST00000396914.4	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	16.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-21	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_14113195_14116425_14116525_14124654
transcript_6533.nic	chr1	+	2235	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	-9	0	intron_retention	TRUE	canonical	3	101	junction_9	103.983735670299	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	NA	False	NA	28	True	ATTAAA	-15	NA	150257241	150265078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
transcript_65330.known	chr3	-	3650	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	29.1520153677237	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	-13	True	NA	-11	True	AATAAA	-14	NA	14178601	14145146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_65334.known	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_10	17.7703439462196	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	-3	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
transcript_65343.nic	chr3	-	492	3	ISM	ENSG00000154767.15	ENST00000476581.6	2944	15	-87	24749	-67	-2207	5prime_fragment	FALSE	canonical	3	295	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAAGTGAAAA	NA	False	NA	NA	False	AATGAA	-13	NA	14178688	14170477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_14170551_14172866_14173063_14178465
transcript_65344.known	chr3	-	557	4	FSM	ENSG00000154767.15	ENST00000511155.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.748372561499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGAAAGAAGGTAAGC	18	False	NA	NA	False	NA	NA	NA	14178621	14168270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_14168381_14170437_14170551_14172866_14173063_14178483
transcript_65345.known	chr3	+	3359	4	FSM	ENSG00000170860.4	ENST00000306024.4	3359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_1	809.6307800473	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTTGATGTTTCTCTG	-19	True	NA	6	True	AATAAA	-33	NA	14178816	14201122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14178882_14181559_14181671_14183936_14184033_14198035
transcript_65352.known	chr3	+	2940	11	FSM	ENSG00000154781.17	ENST00000383794.7	2940	11	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_7	33.3438150186808	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCAGCTGCCTTTTTT	-2	True	NA	25	True	AATAAA	-17	NA	14651761	14672655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048_14668182_14669933_14670087_14670895
transcript_65357.nic	chr3	+	940	9	ISM	ENSG00000154781.17	ENST00000383794.7	2940	11	-25	4586	-25	771	5prime_fragment	FALSE	canonical	3	100	junction_7	35.5527776692624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGAGAAAACATAAAGGAAAA	3	True	NA	NA	False	NA	NA	NA	14651736	14668069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048
transcript_65358.nic	chr3	+	1008	9	ISM	ENSG00000154781.17	ENST00000383794.7	2940	11	-25	4518	-25	839	5prime_fragment	FALSE	canonical	3	100	junction_7	35.5527776692624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAAAAAATCAAAAGAAG	3	True	NA	NA	False	NA	NA	NA	14651736	14668137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048
transcript_65360.known	chr3	+	2720	13	NNC	ENSG00000154781.17	novel	2940	11	NA	NA	-16	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	87.6084645200197	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCCAGCTGCCTTTT	-18	True	NA	23	True	AATAAA	-15	NA	14651745	14672653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661640_14661643_14661668_14661668_14661699_14661841_14661847_14665022_14665054_14665055_14665124_14666804_14666948_14669933_14670087_14670895
transcript_65363.known	chr3	+	5903	20	FSM	ENSG00000154783.12	ENST00000285046.10	5903	20	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	11.6497833251759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTAGACAGTGTTCTTG	8265	False	NA	74	True	ATTAAA	-25	NA	14818961	14934571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14926069_14926199_14932576_14932732_14933130
transcript_65364.known	chr3	+	5768	19	FSM	ENSG00000154783.12	ENST00000543601.5	5768	19	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_17	15.0379150446094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGTGATTAGACAGTG	8265	False	NA	68	True	ATTAAA	-19	NA	14818961	14934565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14932576_14932732_14933130
transcript_65366.known	chr3	-	1119	4	FSM	ENSG00000131368.8	ENST00000449354.6	1119	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	327.380512553817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGCCACATTGAAACA	21	True	NA	NA	False	TATAAA	-32	NA	15065260	15049211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15049936_15053379_15053468_15059368_15059476_15065060
transcript_65370.known	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	55.1180551180827	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-34	True	NA	1	True	AATAAA	-21	NA	15065315	15048511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
transcript_65374.known	chr3	-	1281	3	FSM	ENSG00000131368.8	ENST00000444840.6	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	366.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACATTGGGGCCCTG	-36	True	NA	NA	False	NA	NA	NA	15065317	15051716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15052634_15059368_15059476_15065060
transcript_65375.known	chr3	-	823	2	FSM	ENSG00000131368.8	ENST00000496484.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACATCCATGACATATT	NA	False	NA	NA	False	AATACA	-22	NA	15049967	15042459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15043023_15049707
transcript_65376.nic	chr3	-	739	2	ISM	ENSG00000131368.8	ENST00000447299.1	723	4	-46	6588	-29	-6588	5prime_fragment	FALSE	canonical	3	744	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTCAGGGCTCAGTA	NA	False	NA	NA	False	NA	NA	NA	15065346	15059022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_15059476_15065060
transcript_65377.nic	chr3	-	1067	4	ISM	ENSG00000131381.12	ENST00000441057.5	1352	9	-18	10936	-3	0	5prime_fragment	FALSE	canonical	3	44	junction_3	18.624953392932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-9	True	NA	NA	False	AGTAAA	-15	NA	15099151	15095670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_15096289_15096534_15096711_15098118_15098275_15099034
transcript_65378.known	chr3	-	903	3	FSM	ENSG00000131381.12	ENST00000449050.5	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-1	True	NA	NA	False	AGTAAA	-15	NA	15099143	15095670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15096289_15096534_15096711_15099034
transcript_65380.known	chr3	-	582	3	FSM	ENSG00000131381.12	ENST00000507357.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	43	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGATGTCAAAGGGCAAAT	6	True	NA	NA	False	NA	NA	NA	15099136	15095997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15096289_15096534_15096711_15099021
transcript_65381.known	chr3	+	4348	21	FSM	ENSG00000131375.10	ENST00000253693.7	4348	21	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_14	20.8170603111967	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACTTCTTACAAT	17	True	NA	3	True	AATAAA	-13	NA	15206245	15252916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
transcript_65383.nnic	chr3	-	1747	7	NNC	ENSG00000206562.12	novel	2618	6	NA	NA	-12	-344	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.4415096438945	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTCAAAGTTTTATAGAA	1222	False	NA	-24	True	AATAAA	-18	NA	15427556	15410103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_15410768_15411306_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_65384.nic	chr3	-	1140	7	NIC	ENSG00000206562.12	novel	2618	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	78.5799309973962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCCTTCAGAGCAAA	1222	False	NA	-14	True	AATAAA	-23	NA	15427556	15411335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_15411438_15414020_15414163_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_65387.known	chr3	+	4447	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	3.70944739819828	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	5	True	NA	12	True	AATAAA	-20	NA	15427597	15442613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
transcript_65389.known	chr3	-	2618	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	59.9546495277889	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTCCATATCTGAT	-1	True	NA	NA	False	NA	NA	NA	15427544	15409759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_65392.nnic	chr3	-	990	6	NIC	ENSG00000206562.12	novel	2618	6	NA	NA	-12	-8	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	93.2617820974916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCAAGAGTTTTCCTTC	1222	False	NA	-22	True	AATAAA	-15	NA	15427556	15411343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_15411438_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_65393.nic	chr3	-	1173	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	70.7004950477718	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	1222	False	NA	-37	True	AATAAA	-18	NA	15427556	15413668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_65395.known	chr3	+	1037	5	FSM	ENSG00000144597.14	ENST00000449565.1	1037	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	37.2860563750043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAACAATCTCATCTT	5	True	NA	NA	False	NA	NA	NA	15427597	15439340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15427883_15429912_15430008_15434347_15434539_15436341_15436576_15439108
transcript_65397.known	chr3	-	1221	5	FSM	ENSG00000206562.12	ENST00000450816.6	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	85.3503807841535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCTGAGGCAAGAGAA	3	True	NA	NA	False	NA	NA	NA	15427540	15411017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15426286_15426636_15427401
transcript_654.nic	chr1	+	1612	6	Fusion	ENSG00000175279.22_ENSG00000241563.4	novel	914	5	NA	NA	-65	-96	multi-exon	FALSE	canonical	3	24	junction_5	111.293126472393	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAGTTCAGAATAACAT	259	False	NA	8	True	AATAAA	-20	NA	10430717	10451902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_65400.known	chr3	+	2083	4	FSM	ENSG00000169814.16	ENST00000449107.7	2083	4	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	16.2138486760204	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGGAGCCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	15601369	15645582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15601771_15635423_15635689_15641907_15642058_15644315
transcript_65401.known	chr3	+	2069	4	FSM	ENSG00000169814.16	ENST00000672065.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	28.2174099134244	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	-30	True	NA	31	True	AATAAA	-27	NA	15601744	15645819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
transcript_65402.known	chr3	+	1112	4	FSM	ENSG00000169814.16	ENST00000436193.5	1112	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	25.5255862921022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAACCAGCTCCCACTC	194	False	NA	NA	False	NA	NA	NA	15601968	15644670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15602311_15635423_15635689_15641907_15642058_15644315
transcript_65403.nic	chr3	+	662	3	ISM	ENSG00000169814.16	ENST00000449107.7	2083	4	337	3342	-19	0	5prime_fragment	FALSE	canonical	1	45	junction_2	14.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	NA	False	NA	11	True	ATTAAA	-19	NA	15601706	15642240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_15601771_15635423_15635689_15641907
transcript_65404.known	chr3	+	760	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	34.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	-30	True	NA	23	True	ATTAAA	-31	NA	15601744	15642252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_15601895_15635423_15635689_15641907
transcript_65405.nic	chr3	+	916	3	ISM	ENSG00000169814.16	ENST00000436193.5	1112	4	24	2430	24	0	5prime_fragment	FALSE	canonical	1	21	junction_1	12	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	218	False	NA	11	True	ATTAAA	-19	NA	15601992	15642240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_15602311_15635423_15635689_15641907
transcript_6541.nnic	chr1	+	1584	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_2	141.014402556601	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	0	True	NA	28	True	ATTAAA	-15	NA	150257773	150265078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150258184_150260150_150260172_150261577_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
transcript_65411.known	chr3	-	2009	17	FSM	ENSG00000131373.15	ENST00000321169.10	2009	17	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	14.6733974849044	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAAAAAGTTATTCT	-3	True	NA	NA	False	ATTAAA	-21	NA	15601569	15560698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_65414.known	chr3	-	1880	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	70.9749877695579	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTACAGTAAAGGAAT	-3	True	NA	70	True	AATAAA	-17	NA	15601569	15560746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
transcript_65429.known	chr3	-	1734	14	FSM	ENSG00000131373.15	ENST00000451445.6	1734	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	83.6643052701172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	0	True	NA	71	True	AATAAA	-18	NA	15601587	15560745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_65434.known	chr3	-	4019	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	12	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGCGCCTGGGGAGTTC	11	True	NA	-1	True	AATAAA	-19	NA	16264943	16257060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16260830_16264154_16264230_16264768
transcript_65438.known	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-15	True	NA	-1	True	AATAAA	-40	NA	16264969	16257978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16260830_16264768
transcript_65441.known	chr3	+	1994	10	FSM	ENSG00000154814.14	ENST00000442255.5	1994	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	56.4074682035615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATCTTAATAATTT	-8	True	NA	NA	False	AATGAA	-11	NA	16265206	16303983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16272144_16272322_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_65447.known	chr3	+	3983	9	FSM	ENSG00000154814.14	ENST00000627468.2	3983	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	38.6714930536694	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGGCTCTATGAGTT	NA	False	NA	2	True	ATTAAA	-15	NA	16265159	16306086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_65451.known	chr3	+	3916	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	9.39331544237709	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	-3	True	NA	3	True	ATTAAA	-16	NA	16265211	16306087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_65461.known	chr3	+	1643	10	FSM	ENSG00000154814.14	ENST00000435829.6	1643	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	51.9211177569956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAACTCACTAAGCT	-5	True	NA	NA	False	NA	NA	NA	16265209	16337315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16337111
transcript_65462.known	chr3	-	2974	11	FSM	ENSG00000092345.14	ENST00000399444.7	2974	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	3.69323706252388	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTAGCATTCTGATG	-1	True	NA	-3	True	AATAAA	-23	NA	16605423	16586791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16588714_16592049_16592149_16593654_16593769_16594532_16594584_16595313_16595386_16596749_16596890_16596987_16597052_16597489_16597542_16598086_16598179_16598451_16598599_16605202
transcript_65463.nnic	chr3	-	995	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27150	83	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCCTATTAGTTCTGTC	NA	False	NA	-3	True	AATAAA	-32	NA	16670329	16647669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_16648613_16670277
transcript_65464.known	chr3	-	411	3	FSM	ENSG00000229271.2	ENST00000426218.1	411	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTGATGAGTTGTT	414	False	NA	NA	False	AATAAA	-24	NA	16697479	16687985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_16688212_16692288_16692373_16697378
transcript_65472.known	chr3	+	1131	5	FSM	ENSG00000228956.9	ENST00000598149.6	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.39509972887452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCTATTTATTGTTT	235	False	NA	NA	False	AATAAA	-19	NA	18445236	18469714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18468985
transcript_65473.nic	chr3	+	1680	4	ISM	ENSG00000228956.9	ENST00000628963.2	888	5	50097	-884	-9711	527	3prime_fragment	FALSE	canonical	0	0	junction_1	6.59966329107444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCACGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	18516079	18531254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_18516179_18526386_18526541_18527173_18527327_18529980
transcript_65475.nic	chr3	+	822	4	ISM	ENSG00000183960.9	ENST00000452398.5	5082	16	-98	192057	-74	-52595	5prime_fragment	FALSE	canonical	0	0	junction_1	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAAGAACAAATTG	148	False	NA	NA	False	NA	NA	NA	19148435	19342682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_19148796_19253653_19253888_19281197_19281330_19342586
transcript_65477.known	chr3	-	448	2	FSM	ENSG00000163576.18	ENST00000474780.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGCTCTGTTGTAAGG	NA	False	NA	NA	False	AATAAA	-28	NA	19947025	19945913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_19946255_19946918
transcript_65478.known	chr3	-	2077	9	FSM	ENSG00000163576.18	ENST00000389256.8	2077	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	2.08791163606126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTGTGTTGTTTTCA	-24	True	NA	NA	False	AGTAAA	-18	NA	19934224	19896540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_19896842_19898777_19898846_19899431_19899516_19905619_19905750_19915302_19915414_19918231_19918413_19919832_19919977_19920504_19920568_19933229
transcript_65480.nnic	chr3	+	2417	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.715115579788	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	NA	False	NA	17	True	AATAAA	-17	NA	19947062	19985175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_19947282_19947416_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_65481.nnic	chr3	+	2401	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	291.241261194602	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	NA	False	NA	17	True	AATAAA	-17	NA	19947063	19985175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_19947264_19947413_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_65482.known	chr3	+	1358	7	FSM	ENSG00000144566.11	ENST00000446547.5	1358	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	369.371839147972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGTACAGTAGTCA	-2	True	NA	NA	False	AATATA	-45	NA	19947398	19984147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_19947522_19950805_19951062_19970547_19970718_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_65484.known	chr3	+	2518	6	FSM	ENSG00000144566.11	ENST00000273047.9	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_4	47.9649872302704	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	-19	True	NA	17	True	AATAAA	-17	NA	19947096	19985175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_65495.known	chr3	-	1969	9	FSM	ENSG00000129810.15	ENST00000421451.5	1969	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	68.2257282848633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGGGGTGTTGAC	113	False	NA	NA	False	AATAGA	-23	NA	20186127	20161008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65496.known	chr3	-	2338	9	FSM	ENSG00000129810.15	ENST00000263753.8	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	74.0147789296165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	8	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65498.known	chr3	-	1213	9	FSM	ENSG00000129810.15	ENST00000425061.5	1213	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	82.8989407350902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGGGGTGTTGAC	113	False	NA	NA	False	AATAGA	-23	NA	20186127	20161008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_655.known	chr1	+	905	5	FSM	ENSG00000175279.22	ENST00000309048.8	905	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	65.8046350951056	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGGTTACTAATGT	-26	True	NA	15	True	AATAAA	-15	NA	10430432	10442808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_65500.known	chr3	-	3070	8	FSM	ENSG00000129810.15	ENST00000412997.6	3070	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_7	33.7656992964694	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTTCCTTCTATT	-7	True	NA	-3	True	AATAAA	-15	NA	20186206	20169483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65502.known	chr3	-	1075	8	FSM	ENSG00000129810.15	ENST00000417364.1	1075	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	67.3264965883206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTAAGAGTACACAAAC	113	False	NA	NA	False	TTTAAA	-37	NA	20186127	20170643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65506.nic	chr3	-	2057	8	ISM	ENSG00000129810.15	ENST00000263753.8	2338	9	-114	9892	-99	0	5prime_fragment	FALSE	canonical	3	88	junction_7	49.7622920923636	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	NA	False	NA	-21	True	AATAAA	-33	NA	20186305	20170484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65511.known	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	74.2782963329292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	8	True	NA	-21	True	AATAAA	-33	NA	20186191	20170484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65515.known	chr3	-	2266	7	FSM	ENSG00000129810.15	ENST00000442720.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	73.0990576014645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCCTTCTATTCTT	-7	True	NA	0	True	AATAAA	-18	NA	20186206	20169480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65524.nic	chr3	-	1249	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-138	3963	-59	115	5prime_fragment	FALSE	canonical	3	150	junction_5	37.841775856849	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAGAGAATAAAAGCGA	NA	False	NA	NA	False	AAGAAA	-35	NA	20186265	20174606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65525.nnic	chr3	-	1186	6	NNC	ENSG00000129810.15	novel	3070	8	NA	NA	-8	115	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	82.7042925125413	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAGAGAATAAAAGCGA	26	False	20186224	NA	False	AAGAAA	-35	NA	20186214	20174606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185959
transcript_65526.nic	chr3	-	1178	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-114	4122	-99	115	5prime_fragment	FALSE	canonical	3	88	junction_5	57.7636563939645	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAGAGAATAAAAGCGA	NA	False	NA	NA	False	AAGAAA	-35	NA	20186305	20174606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65529.nnic	chr3	-	1751	6	NNC	ENSG00000129810.15	novel	3070	8	NA	NA	-41	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.2884267223657	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAGAAGAGAA	-7	True	NA	NA	False	ACTAAA	-22	NA	20186247	20174666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185367
transcript_65530.nic	chr3	-	1189	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-138	4023	-59	55	5prime_fragment	FALSE	canonical	3	150	junction_5	37.841775856849	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAGAAGAGAA	NA	False	NA	NA	False	ACTAAA	-22	NA	20186265	20174666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_65532.nic	chr3	-	1058	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-54	4182	-39	55	5prime_fragment	FALSE	canonical	3	88	junction_5	57.7636563939645	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAGAAGAGAA	-5	True	NA	NA	False	ACTAAA	-22	NA	20186245	20174666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_65537.known	chr3	-	10478	8	FSM	ENSG00000151789.12	ENST00000281523.8	10478	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.86882248795452	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGATGATGCTTGTTC	-1	True	NA	NA	False	ATTAAA	-32	NA	21751210	21412217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_21421448_21423962_21424065_21425491_21425671_21436969_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
transcript_65539.nic	chr3	-	1110	5	ISM	ENSG00000151789.12	ENST00000281523.8	10478	8	6	24603	6	-1	5prime_fragment	FALSE	canonical	3	17	junction_2	5.7227615711298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGCAAAGTGTCATTTATA	5	True	NA	-5	True	AATAAA	-6	NA	21751204	21436820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
transcript_65543.known	chr3	+	2715	6	FSM	ENSG00000182247.10	ENST00000396703.6	2715	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.077593251883	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGGAAAGTTGCTCAGA	9	True	NA	6	True	AATAAA	-22	NA	23203326	23591794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23203465_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
transcript_65544.known	chr3	+	1783	6	FSM	ENSG00000170142.12	ENST00000306627.8	1783	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	28.0570846668003	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAGTACATGTCCTG	-27	True	NA	NA	False	GATAAA	-24	NA	23805954	23891640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23806089_23807236_23807422_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_65547.known	chr3	+	1398	5	FSM	ENSG00000170142.12	ENST00000346855.7	1398	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.5048541401682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTCATTTACTTT	-17	True	NA	24	True	AATAAA	-27	NA	23805964	23891316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23806089_23807236_23807422_23887566_23887700_23889111_23889260_23890508
transcript_65548.known	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	44.6507278776058	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	-6	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_65553.known	chr3	-	2335	5	FSM	ENSG00000197885.11	ENST00000388759.7	2335	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.1040163970714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACATGTACTGCCAAAAT	-15	True	NA	NA	False	NA	NA	NA	23916969	23891659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23911328_23911447_23916783
transcript_65560.known	chr3	+	2155	4	FSM	ENSG00000174748.22	ENST00000307839.10	2155	4	0	0	0	0	multi-exon	FALSE	canonical	3	11634	junction_1	5133.87263400858	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	1	True	NA	23	True	CATAAA	-18	NA	23917131	23920989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917849_23918032_23918439_23918577_23919195
transcript_65565.known	chr3	+	2221	4	FSM	ENSG00000174748.22	ENST00000413699.7	2221	4	0	0	0	0	multi-exon	FALSE	canonical	3	2379	junction_1	9493.77821991271	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	1	True	NA	23	True	CATAAA	-18	NA	23917131	23920989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917240_23917849_23918032_23918439_23918577_23919195
transcript_65568.known	chr3	+	824	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	10094.1415792638	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
transcript_65571.known	chr3	+	605	4	FSM	ENSG00000174748.22	ENST00000436146.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	10513.5616546757	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917946_23918032_23918439_23918577_23919195
transcript_65574.known	chr3	+	566	4	FSM	ENSG00000174748.22	ENST00000645079.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	10594.1480387366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCGTGGCCTTGGAAA	7	True	NA	NA	False	NA	NA	NA	23917137	23919393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917836_23918032_23918439_23918577_23919195
transcript_65579.known	chr3	+	564	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	10394.8034453118	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	-3	True	NA	13	True	AATAAA	-2	NA	23917147	23919537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
transcript_65586.known	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10592.7342394052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	123	False	NA	NA	False	NA	NA	NA	23917298	23919301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
transcript_65589.known	chr3	-	795	4	FSM	ENSG00000197885.11	ENST00000416026.2	795	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.4783876475414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGATTGCCTTTAAGTG	2	True	NA	NA	False	ACTAAA	-30	NA	23916952	23893064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23916783
transcript_65594.known	chr3	-	778	2	FSM	ENSG00000223791.1	ENST00000426702.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACAGTAGGTGAATTTT	283	False	NA	NA	False	AATAAA	-23	NA	23806905	23804023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23804715_23806818
transcript_65598.known	chr3	-	1644	5	FSM	ENSG00000197885.11	ENST00000415901.6	1644	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	33.8156768378218	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAATAAAAGTATCAAA	30	True	NA	-43	True	NA	NA	NA	23916924	23892309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916783
transcript_65599.known	chr3	+	1785	2	FSM	ENSG00000174748.22	ENST00000490223.1	1785	2	0	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	-3	True	NA	27	True	AATAAA	-16	NA	23917147	23919551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23918577_23919195
transcript_65600.known	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_2	314	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	-17	True	NA	27	True	AATAAA	-16	NA	23917704	23919551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23918032_23918439_23918577_23919195
transcript_65601.known	chr3	-	1605	5	FSM	ENSG00000197885.11	ENST00000412028.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	39.9773373300424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAGTATCAAAAAT	-9	True	NA	-40	True	NA	NA	NA	23916963	23892306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911447_23916860
transcript_65602.known	chr3	+	1729	2	FSM	ENSG00000174748.22	ENST00000465786.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	11634	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_23917174_23917849
transcript_65603.known	chr3	+	3132	8	FSM	ENSG00000077092.20	ENST00000330688.9	3132	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.66651877999928	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGGGAGCTTTTACT	5	True	NA	6	True	AATAAA	-17	NA	25428262	25597932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_25428889_25461192_25461342_25501181_25501324_25569757_25569919_25580545_25580723_25593502_25593708_25594519_25594679_25596419
transcript_65604.known	chr3	-	2534	12	FSM	ENSG00000151092.18	ENST00000280700.10	2534	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	26.8940375585063	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-1	True	NA	-1	True	AATAAA	-19	NA	25783443	25718943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_65605.known	chr3	-	2086	12	FSM	ENSG00000151092.18	ENST00000308710.9	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	100.85854589965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTTCCATATGTGAC	6628	False	NA	-23	True	AATAAA	-14	NA	25783381	25719275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25736401_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_65606.known	chr3	-	2024	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	79.6972396008795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATATGTGACTATAA	4	True	NA	-18	True	AATAAA	-19	NA	25783438	25719270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_65609.known	chr3	+	1506	3	FSM	ENSG00000151093.8	ENST00000280701.8	1506	3	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGAAGAAATTATG	-4	True	NA	NA	False	ATTAAA	-17	NA	25790089	25794531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_25790148_25790989_25791998_25794091
transcript_65612.known	chr3	-	3264	6	FSM	ENSG00000163508.13	ENST00000449599.4	3264	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	25.350345165303	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATAGCTCTGTCTTCT	0	True	NA	-16	True	AATAAA	-19	NA	27722323	27715952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_65613.known	chr3	-	2080	6	FSM	ENSG00000163508.13	ENST00000461503.2	2080	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	110.107947033809	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCCATGTTTGCCCTA	-3	True	NA	-107	True	NA	NA	NA	27722711	27716508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27722429
transcript_65616.known	chr3	+	332	3	FSM	ENSG00000225548.7	ENST00000455984.1	332	3	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_2	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCCTGGATTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	27821597	27860192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_27821725_27824649_27824749_27860086
transcript_65622.known	chr3	-	4403	8	FSM	ENSG00000163512.14	ENST00000479665.6	4403	8	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	41.8071373654533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAACTTGAATTGATT	15	True	NA	-19	True	AATAAA	-39	NA	28348824	28321046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65629.known	chr3	-	1485	7	FSM	ENSG00000163512.14	ENST00000463512.5	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	32.1735743878247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCAAAAGCAAATTTTC	21	True	NA	NA	False	NA	NA	NA	28348972	28326489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65631.known	chr3	-	943	7	FSM	ENSG00000163512.14	ENST00000334100.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	51.4114665117509	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTTTATCATTTGG	474	False	NA	-14	True	AATAAA	-16	NA	28348629	28331688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28331951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65632.known	chr3	-	1366	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	53.5892298466358	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTGTTTTATCATTT	53	False	28349071	-16	True	AATAAA	-14	NA	28349050	28331690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_65636.nnic	chr3	+	777	5	NNC	ENSG00000187118.14	novel	670	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	333.35454099202	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	NA	False	NA	15	True	AATAAA	-15	NA	28241577	28319773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_28241813_28263290_28263381_28294433_28294530_28316332_28316424_28319508
transcript_65639.known	chr3	+	670	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	321.121083082379	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	-4	True	NA	15	True	AATAAA	-15	NA	28241623	28319773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
transcript_65643.known	chr3	+	6009	4	FSM	ENSG00000187118.14	ENST00000466830.6	6009	4	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_2	112.018847620489	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGCCAAAAAAAAAAAGTTT	-9	True	NA	NA	False	AGTAAA	-15	NA	28241618	28325142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241813_28263290_28263381_28316332_28316424_28319508
transcript_65645.known	chr3	+	549	3	FSM	ENSG00000187118.14	ENST00000423894.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	269	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGGTTTCTTAAATG	-10	True	NA	13	True	AATAAA	-13	NA	28241617	28319771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_28241813_28316332_28316424_28319508
transcript_65647.nic	chr3	-	941	2	ISM	ENSG00000163512.14	ENST00000420543.6	1366	7	45	8396	-33	-1541	5prime_fragment	FALSE	canonical	3	176	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATACCAACAAAGGAAAT	-12	True	NA	NA	False	NA	NA	NA	28349005	28340086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_28340623_28348600
transcript_65654.known	chr3	+	3217	2	FSM	ENSG00000197385.6	ENST00000360311.5	3217	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAACTAATACAGATGC	-11	True	NA	102	True	AATACA	-31	NA	31981749	31991723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_31981903_31988659
transcript_65655.known	chr3	-	1891	1	FSM	ENSG00000261572.1	ENST00000565519.1	1891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGGCTTAAAATCACCA	-1	True	NA	1	True	AATAAA	-14	NA	32238578	32236687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32236700_32238600
transcript_65656.known	chr3	+	1169	4	FSM	ENSG00000170293.9	ENST00000307526.4	1169	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	8.2192186706253	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTGTGTTTGATTGG	-27	True	NA	31	True	ATTAAA	-17	NA	32238679	32370321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32239120_32357372_32357547_32367871_32367989_32369883
transcript_65657.known	chr3	+	1856	5	FSM	ENSG00000153551.14	ENST00000334983.10	1856	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	66.027929696455	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGCACCCGTGGTGT	-1	True	NA	NA	False	NA	NA	NA	32391852	32455528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454240
transcript_65658.known	chr3	+	1214	4	FSM	ENSG00000153551.14	ENST00000349718.8	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	134.650164005346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCCAGTTGCACAAGGA	4	True	NA	7	True	AATAAA	-8	NA	32391697	32454830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32392066_32441839_32442014_32452391_32452474_32454240
transcript_65659.known	chr3	-	3307	4	FSM	ENSG00000091317.8	ENST00000205636.4	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_1	37.4195433192633	724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTTGTAAGTGTTTA	-32	True	NA	-11	True	AATAAA	-20	NA	32502852	32481311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32484098_32487937_32488037_32491709_32491887_32502607
transcript_65663.known	chr3	-	2485	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	36.8083437099072	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTTGCATTCTCTTA	33	False	32570891	-3	True	AATAAA	-29	NA	32570858	32525973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
transcript_65668.known	chr3	-	1827	11	FSM	ENSG00000144635.9	ENST00000432458.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	117.255447634641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATCAGATAGCGTTT	33	False	32570891	87	True	AATAAA	-29	NA	32570858	32526283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32570345_32570420_32570624
transcript_65673.known	chr3	+	2815	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-43	0	0	0	multi-exon	FALSE	canonical	3	272	junction_12	36.650206743223	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	7	True	NA	17	True	ATTAAA	-18	NA	32685144	32773875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_65678.known	chr3	+	2573	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	84.4280984402016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	7	True	NA	13	True	AATAAA	-20	NA	32685144	32773714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_6568.nic	chr1	-	1624	7	NIC	ENSG00000117362.13	novel	1730	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	169.8532863647	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	297	False	NA	-21	True	AATAAA	-14	NA	150269046	150265403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150267992_150268697
transcript_6569.known	chr1	-	1730	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	88.706757853553	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-29	True	NA	-21	True	AATAAA	-14	NA	150269016	150265403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_65695.nic	chr3	+	1541	10	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	69	45765	-6	75	5prime_fragment	FALSE	canonical	3	305	junction_8	29.1661904723031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTGGAAACATACATAAGA	7	True	NA	NA	False	NA	NA	NA	32685213	32727949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667
transcript_65698.nic	chr3	+	853	5	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	16	60365	16	0	5prime_fragment	FALSE	canonical	3	338	junction_3	20.920982290514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAATGGAAAGAATGAG	-3	True	NA	NA	False	NA	NA	NA	32685160	32713349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226
transcript_657.known	chr1	+	914	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	64.0800280898815	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTCAGAGGATGGAAGC	30	False	NA	53	True	AAGAAA	-2	NA	10430782	10442334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_65700.nic	chr3	+	2073	4	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	16	63551	16	1388	5prime_fragment	FALSE	canonical	3	338	junction_3	22.4845626053867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGAATTTCCTGAA	-3	True	NA	NA	False	NA	NA	NA	32685160	32710163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669
transcript_65703.known	chr3	-	2512	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	120.161446950897	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTTTGATCTGTGG	307	False	NA	-4	True	AATAAA	-38	NA	33096835	32996608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
transcript_65704.known	chr3	-	2523	16	FSM	ENSG00000170266.16	ENST00000307363.10	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_6	34.6657692191527	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATAGTCTTGGTTTG	-4	True	NA	-12	True	AATAAA	-30	NA	33097146	32996616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_65713.known	chr3	-	2018	13	FSM	ENSG00000170266.16	ENST00000307377.12	2018	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	200.672342112432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACTGTTTTTAAT	-4	True	NA	-14	True	AATAAA	-16	NA	33097146	32996728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33065462_33065558_33072543_33072714_33097010
transcript_65717.nic	chr3	-	1964	10	ISM	ENSG00000170266.16	ENST00000307363.10	2523	16	-28	48696	28	293	5prime_fragment	FALSE	canonical	3	508	junction_9	36.9667852250712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTTCTTCTTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	33097174	33045312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_65726.known	chr3	+	3827	15	FSM	ENSG00000153558.16	ENST00000484457.6	3827	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	4.59369576880386	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTTGCTTCCTTTTAA	-21	True	NA	NA	False	AAAAAG	-5	NA	33277441	33388092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373259_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
transcript_65730.known	chr3	+	5962	18	FSM	ENSG00000170248.15	ENST00000457054.6	5962	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	123.319878314663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGTATGAATTCTTAT	-51	True	NA	18	True	AATAAA	-21	NA	33798570	33869707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828837_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_65731.known	chr3	+	5884	18	FSM	ENSG00000170248.15	ENST00000307296.8	5884	18	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_10	47.7367347830878	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTGGAGTATGAATTC	8	True	NA	14	True	AATAAA	-17	NA	33798629	33869703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_65732.known	chr3	+	3067	11	FSM	ENSG00000144681.11	ENST00000273183.8	3067	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	6.96060342211794	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCCTGATCTCTTCT	-8	True	NA	27	True	AATAAA	-34	NA	36380503	36548007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36380755_36443363_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_65737.nic	chr3	-	1682	2	ISM	ENSG00000178567.8	ENST00000623924.1	543	3	-173	2180	18	1321	5prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAGAAAAAAGTGTA	0	True	NA	NA	False	NA	NA	NA	36993113	36988989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_36990436_36992877
transcript_65738.known	chr3	-	513	2	FSM	ENSG00000178567.8	ENST00000624586.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTAAAGTAAACACTTTG	1396	False	NA	NA	False	TTTAAA	-7	NA	36992268	36990310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_36990436_36991880
transcript_65741.known	chr3	+	2494	19	FSM	ENSG00000076242.16	ENST00000231790.8	2494	19	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_11	29.8331264217944	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	5	True	NA	31	True	AATAAA	-20	NA	36993517	37050846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65743.known	chr3	+	2428	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	91.8611405100245	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	-16	True	NA	29	True	AATAAA	-18	NA	36993803	37050844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65745.known	chr3	+	2205	18	FSM	ENSG00000076242.16	ENST00000673673.1	2205	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	71.2067995664618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACAGTGGATTGATTA	82	False	NA	-16	True	NA	NA	NA	36993594	37050799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37048516_37048610_37048903_37049018_37050485
transcript_65746.known	chr3	+	2403	18	FSM	ENSG00000076242.16	ENST00000674111.1	2403	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	73.5927727006642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATACACAGTGGATTGA	-18	True	NA	-19	True	NA	NA	NA	36993494	37050796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_6575.known	chr1	+	509	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	124.425720813665	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	-3	True	NA	10	True	AATAAA	-16	NA	150272789	150280916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_65752.known	chr3	+	2280	18	FSM	ENSG00000076242.16	ENST00000539477.6	2280	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	93.80344612641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATAGTATTCCTTTATA	-16	True	NA	-32	True	NA	NA	NA	36993803	37050783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993891_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65755.known	chr3	+	2183	17	FSM	ENSG00000076242.16	ENST00000413212.2	2183	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	98.3773824362084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGATGTGTCTTAACA	1	True	NA	8	True	TATAAA	-1	NA	36993784	37050823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993891_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65756.known	chr3	+	1978	16	FSM	ENSG00000076242.16	ENST00000673715.1	1978	16	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_11	18.4306507993855	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGGCTCATGGCTGTA	10	True	NA	13	True	AATAAA	-14	NA	36993522	37047740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518
transcript_65758.known	chr3	+	1712	15	FSM	ENSG00000076242.16	ENST00000673899.1	1712	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	82.9461652310136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTATACTTGCCTTCTG	-24	True	NA	-48	True	NA	NA	NA	36993488	37050767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_65760.known	chr3	+	7673	23	FSM	ENSG00000144674.17	ENST00000356847.8	7673	23	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_18	67.8309304371313	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATTTGTTTATTGTAC	4	True	NA	6	True	AATAAA	-14	NA	37243251	37366745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37366079
transcript_65764.nic	chr3	+	3190	14	NIC	ENSG00000144674.17	novel	7673	23	NA	NA	-4	-209	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	29.5039862916961	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAAAAAGTTAAGCAGA	-5	True	NA	NA	False	AAGAAA	-5	NA	37243242	37324750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_65766.known	chr3	+	7772	24	FSM	ENSG00000144674.17	ENST00000361924.7	7806	24	-94	128	-14	1	multi-exon	TRUE	canonical	3	23	junction_2	66.4346687911613	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATTGTACTTGTTC	9326	False	NA	12	True	AATAAA	-20	NA	37243176	37366751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_37243623_37251394_37251485_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
transcript_65779.nic	chr3	+	1049	3	ISM	ENSG00000144674.17	ENST00000450863.6	1617	11	-27	41392	-4	-7871	5prime_fragment	FALSE	canonical	3	86	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATAATAATAATAATTAT	-5	True	NA	NA	False	NA	NA	NA	37243242	37274114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_37243623_37251394_37251485_37273535
transcript_65780.known	chr3	-	2389	1	FSM	ENSG00000270194.1	ENST00000604992.1	2389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCCCATCCACCTA	10	True	NA	NA	False	AATAAA	-39	NA	37244177	37241788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_37241800_37244200
transcript_65781.known	chr3	+	4169	5	FSM	ENSG00000198590.12	ENST00000665000.1	4169	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6583123951777	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGACATGTATTTTCTT	18	False	NA	NA	False	ATTAAA	-36	NA	37381094	37418384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_37383372_37399476_37399660_37411137_37411310_37416553_37416725_37417018
transcript_65782.known	chr3	+	7860	28	FSM	ENSG00000144668.12	ENST00000264741.10	7860	28	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_12	16.2370133819779	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAGTTCAATCTGTAA	0	True	NA	14	True	AATAAA	-17	NA	37452140	37823507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_37452560_37471006_37471135_37473353_37473461_37481483_37481608_37494500_37494569_37503177_37503308_37505999_37506086_37508558_37508628_37513762_37513901_37517503_37517610_37519259_37519355_37523520_37523612_37526025_37526072_37533313_37533469_37542424_37542586_37629186_37629337_37653713_37653791_37683864_37684016_37732711_37732799_37736903_37736984_37741729_37741820_37743925_37744035_37750461_37750570_37777391_37777518_37779901_37780022_37784976_37785079_37803822_37803943_37818890
transcript_65785.known	chr3	-	895	4	FSM	ENSG00000235257.10	ENST00000366441.4	895	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	37861765	37818276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_37818931_37821013_37821101_37834678_37834768_37861700
transcript_65789.known	chr3	+	2655	5	FSM	ENSG00000172936.16	ENST00000652213.1	2655	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	58.2639468282059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTCTACCTTGGAA	-31	True	NA	-13	True	AATATA	-27	NA	38138632	38143001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38139029_38139863_38139999_38140387_38140550_38140756_38140849_38141131
transcript_6579.nic	chr1	-	1960	6	NIC	ENSG00000117362.13	novel	2353	6	NA	NA	-23	0	intron_retention	FALSE	canonical	3	22	junction_5	175.325525808423	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGGGGGAACTTGGCT	297	False	NA	-23	True	AATAAA	-12	NA	150269046	150265405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150267992_150268697
transcript_65790.known	chr3	+	2667	5	FSM	ENSG00000172936.16	ENST00000650905.2	2667	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	9.82344135219425	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	-3	True	NA	8	True	AATAAA	-20	NA	38138660	38143022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38139029_38139863_38139999_38140387_38140569_38140756_38140849_38141131
transcript_65791.known	chr3	+	2839	4	FSM	ENSG00000172936.16	ENST00000652590.1	2839	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTACCTTGGAAACTTG	-3	True	NA	-8	True	AATAAA	-4	NA	38138660	38143006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38139029_38139863_38139999_38140387_38140849_38141131
transcript_65792.known	chr3	+	2483	4	FSM	ENSG00000172936.16	ENST00000651800.2	2483	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	73.8301353709235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	-3	True	NA	5	True	AATAAA	-17	NA	38138660	38143019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38139029_38139863_38139999_38140756_38140849_38141131
transcript_65794.known	chr3	+	4517	18	FSM	ENSG00000172939.9	ENST00000311806.8	4517	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_7	30.6986694255349	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGTGTATGGACGCT	-11	True	NA	NA	False	AATAAA	-13	NA	38165536	38255484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38165947_38183002_38183116_38190730_38190840_38198721_38198864_38216095_38216152_38221577_38221688_38223811_38223914_38224570_38224705_38229686_38229736_38230364_38230431_38236838_38236962_38242742_38242779_38246074_38246222_38247667_38247733_38249965_38250019_38251402_38251472_38252327_38252393_38252816
transcript_65795.nic	chr3	+	1030	6	ISM	ENSG00000093217.11	ENST00000649234.1	2106	20	-80	47164	-25	-4156	5prime_fragment	FALSE	canonical	3	13	junction_4	5.23832034148352	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAAAAAATAATAGTGT	NA	False	NA	NA	False	NA	NA	NA	38346734	38366125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936_38363018_38365198_38365286_38365607
transcript_65797.known	chr3	+	11782	11	FSM	ENSG00000114739.14	ENST00000352511.5	11782	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	4.69148164229596	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	3	True	NA	9	True	AATAAA	-16	NA	38453889	38493142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38454375_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_65798.nnic	chr3	+	1772	11	NNC	ENSG00000114739.14	novel	5370	10	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0004999875006	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAAAAAAGTTGT	212	False	NA	-54	True	NA	NA	NA	38454441	38483374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_38454685_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_6580.known	chr1	-	2353	6	FSM	ENSG00000117362.13	ENST00000360244.8	2353	6	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_5	28.9717103395709	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGGGGGAACTTGGCT	40	False	NA	-23	True	AATAAA	-12	NA	150269303	150265405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_65802.known	chr3	+	3076	6	FSM	ENSG00000157036.13	ENST00000287675.10	3076	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	15.1973681932103	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATTGTTCTGCTCTTT	-9	True	NA	6	True	GATAAA	-17	NA	38496339	38526303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_65804.known	chr3	+	580	2	FSM	ENSG00000157036.13	ENST00000489813.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTACAGCAATGAGCACC	-4	True	NA	NA	False	NA	NA	NA	38496344	38498022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_38496531_38497628
transcript_65806.known	chr3	+	3965	19	FSM	ENSG00000114742.14	ENST00000302313.10	3965	19	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_8	38.5652005227255	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	6	True	NA	17	True	AATAAA	-17	NA	39052015	39096664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
transcript_65808.known	chr3	-	3046	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	23.35560692853	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-4	True	NA	1	True	AATACA	-25	NA	39107627	39096598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_65809.known	chr3	+	2426	7	FSM	ENSG00000168026.19	ENST00000479954.5	2426	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAATTCAAGAA	2	True	NA	NA	False	AAAAAG	-14	NA	39107716	39119657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39107865_39109084_39109215_39110028_39110140_39110850_39111018_39112457_39112581_39114584_39114743_39118068
transcript_65812.known	chr3	-	2593	5	FSM	ENSG00000144655.15	ENST00000514182.1	2593	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	16.4525833837729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCTTCTGCCCCACCC	2	True	NA	NA	False	NA	NA	NA	39154562	39142337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154496
transcript_65813.nnic	chr3	-	3158	5	NNC	ENSG00000144655.15	novel	3164	5	NA	NA	-161	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	23.6801604724292	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTATGTATTTGT	NA	False	NA	-4	True	AATAAA	-16	NA	39154723	39141854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154575
transcript_65814.known	chr3	+	1251	2	FSM	ENSG00000287620.1	ENST00000669199.1	1251	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGGAGATGCTACTT	1499	False	NA	NA	False	AATAAA	-19	NA	39177760	39179586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39177929_39178503
transcript_6582.known	chr1	+	418	5	FSM	ENSG00000118292.9	ENST00000369098.3	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	111.918217909329	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	-13	True	NA	8	True	AATAAA	-14	NA	150272779	150280914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_65820.known	chr3	+	2101	7	FSM	ENSG00000144659.13	ENST00000650617.1	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	17.4132771821453	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTTCAAAAAAGCAGC	-13	True	NA	54	True	NA	NA	NA	39383369	39397351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39383794_39389494_39389617_39390422_39390508_39391440_39391621_39391852_39392022_39394409_39394577_39396397
transcript_65827.nic	chr3	+	1816	6	NIC	ENSG00000144659.13	novel	2101	7	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	85.063740806527	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAGCTGTTTGGAAA	NA	False	NA	42	True	ATTAAA	-29	NA	39383326	39397203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_39383794_39389494_39389617_39390422_39390508_39391852_39392022_39394409_39394577_39396397
transcript_65836.nic	chr3	+	1179	7	NIC	ENSG00000168028.14	novel	1227	5	NA	NA	132	0	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	1953.60960077038	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	146	False	NA	6	True	AATAAA	-16	NA	39406894	39412438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_39407083_39407620_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_65839.known	chr3	+	1032	7	FSM	ENSG00000168028.14	ENST00000443003.2	1032	7	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	2058.34486501493	8966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	14	False	NA	2	True	AATAAA	-12	NA	39406734	39412434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39406765_39407620_39407787_39408605_39408740_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_65840.known	chr3	+	1140	7	FSM	ENSG00000168028.14	ENST00000301821.11	1140	7	0	0	0	0	multi-exon	FALSE	canonical	3	3289	junction_1	887.285498334981	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACTGTAGATAGTGTAT	-1	True	NA	35	True	AATAAA	-32	NA	39406719	39412542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_39406765_39407620_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_65841.nnic	chr3	+	1068	4	NNC	ENSG00000168314.19	novel	911	5	NA	NA	-3605	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTAGTGTGGCTTCTGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	39498457	39503027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_39498757_39499466_39499533_39502065_39502276_39502534
transcript_65844.known	chr3	-	1958	3	FSM	ENSG00000280739.4	ENST00000625390.2	1958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGGTCCTGTGTTATT	824	False	NA	NA	False	TATAAA	-17	NA	40309542	40173144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_40174723_40301236_40301397_40309322
transcript_65845.nic	chr3	-	720	2	ISM	ENSG00000280739.4	ENST00000663881.1	1377	3	26	1819	7	-1819	5prime_fragment	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCATTCCACTAAGGTC	833	False	NA	NA	False	AAAAAG	-17	NA	40309533	40300887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_40301397_40309322
transcript_65846.known	chr3	+	987	4	FSM	ENSG00000114784.4	ENST00000232905.4	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_2	64.9461315245181	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	10	True	NA	73	True	AGTAAA	-23	NA	40309706	40312424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40309973_40310892_40311057_40311469_40311572_40311969
transcript_65851.known	chr3	+	637	3	FSM	ENSG00000114784.4	ENST00000488260.1	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_2	25.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAAAGTATTCAAATAC	24	False	NA	NA	False	NA	NA	NA	40309825	40311795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40309973_40310892_40311057_40311469
transcript_65853.known	chr3	-	2201	3	FSM	ENSG00000223797.7	ENST00000420850.2	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	9	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATAAAACAGAATAATAA	-14	True	NA	NA	False	CATAAA	-9	NA	40453329	40444932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_40446848_40451704_40451783_40453121
transcript_65855.known	chr3	+	7072	6	FSM	ENSG00000188846.14	ENST00000338970.10	7072	6	0	0	0	0	multi-exon	FALSE	canonical	3	2270	junction_1	763.010615915663	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTCATATTGTGAT	NA	False	NA	13	True	AATAAA	-21	NA	40457291	40468587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40457364_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_65857.known	chr3	+	7136	6	FSM	ENSG00000188846.14	ENST00000396203.7	7136	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	1575.98071054185	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTCATATTGTGAT	2	True	NA	13	True	AATAAA	-21	NA	40457338	40468587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_65864.known	chr3	+	812	6	FSM	ENSG00000188846.14	ENST00000416518.1	812	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1988.92326649371	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTAAGCCTTTGGATT	17	False	NA	7	True	AATAAA	-25	NA	40457353	40462280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461940
transcript_65865.known	chr3	+	794	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	3747	junction_3	246.360888738452	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	540	False	NA	14	True	AATAAA	-14	NA	40457876	40462368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_65872.known	chr3	+	4841	5	FSM	ENSG00000177873.14	ENST00000432264.4	4841	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.60977222864644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTGTGATATTCTGT	-19	True	NA	NA	False	AATAAA	-21	NA	40477121	40491053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40486805
transcript_65873.known	chr3	+	3291	5	FSM	ENSG00000177842.12	ENST00000314529.10	3291	5	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	11.5190060335083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACCTATTATTAT	4	True	NA	NA	False	NA	NA	NA	40506038	40518736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401_40512516_40515859
transcript_65875.known	chr3	+	2192	4	FSM	ENSG00000177873.14	ENST00000520737.5	2192	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	7.58653778449403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACTAGGAGAAATGCAA	1	True	NA	NA	False	NA	NA	NA	40477141	40488578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40477358_40477917_40478004_40482587_40482705_40486805
transcript_65880.known	chr3	+	2022	3	FSM	ENSG00000177842.12	ENST00000418905.1	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	5	True	NA	6	True	AATAAA	-21	NA	40506039	40517709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40506139_40506303_40506377_40515859
transcript_65886.known	chr3	+	2613	4	FSM	ENSG00000172888.12	ENST00000431278.5	2613	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	6.54896090146283	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAATCTGTTGTGCA	3	True	NA	134	True	AGTAAA	-21	NA	40524897	40534071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40525275_40525778_40525865_40530208_40530317_40532029
transcript_65889.known	chr3	+	255	1	FSM	ENSG00000234287.1	ENST00000457554.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	33	False	NA	NA	False	NA	NA	NA	40761544	40761799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_40761500_40761800
transcript_65890.known	chr3	-	4294	37	FSM	ENSG00000168038.11	ENST00000301831.9	4294	37	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_5	9.1000949662661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCAGCCTGCCAGCATC	29	False	41962132	-10	True	AATAAA	-20	NA	41962103	41246598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_41246993_41249488_41249575_41398078_41398265_41455496_41455596_41463086_41463254_41566024_41566131_41615668_41615718_41663606_41663700_41681507_41681653_41681752_41681805_41705056_41705152_41705253_41705306_41715236_41715294_41715446_41715569_41717727_41717862_41754360_41754489_41789660_41789844_41800131_41800294_41819422_41819507_41835863_41835972_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_65892.nic	chr3	-	1932	18	NIC	ENSG00000168038.11	novel	1904	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	7.02048411662856	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGACTCCGTGTGGCAGT	20	False	41962132	-5	True	AATAAA	-20	NA	41962112	41882149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_41882281_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_65895.known	chr3	-	647	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	12.657891697365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGAATTTGGCTGT	2	True	NA	43	True	NA	NA	NA	41962130	41937094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
transcript_65897.known	chr3	+	3052	17	FSM	ENSG00000168036.18	ENST00000453024.6	3052	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	315.683979637865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAATGGTACTGACTTT	115	False	NA	NA	False	NA	NA	NA	41199444	41239947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_65898.known	chr3	+	2770	17	FSM	ENSG00000168036.18	ENST00000646116.1	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	310.28573021491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	20	False	NA	NA	False	NA	NA	NA	41199524	41239904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_65899.known	chr3	+	2749	16	FSM	ENSG00000168036.18	ENST00000431914.6	2749	16	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	257.761095245621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTAGCCTTGCTTGTTA	1840	False	NA	NA	False	NA	NA	NA	41198678	41239899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41198782_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_6590.known	chr1	+	1179	6	FSM	ENSG00000159208.16	ENST00000369094.5	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	20.2049498885793	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-16	True	NA	20	True	ATTAAA	-21	NA	150282542	150287093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150282619_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_65901.known	chr3	+	3472	16	FSM	ENSG00000168036.18	ENST00000396185.8	3472	16	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_15	146.643998248214	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	59	False	NA	30	True	ATTAAA	-15	NA	41199388	41240443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_65902.known	chr3	+	2778	16	FSM	ENSG00000168036.18	ENST00000645982.1	2778	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	232.685156858409	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACTTTGCTTGCTT	112	False	NA	NA	False	NA	NA	NA	41199441	41239955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239812
transcript_65905.known	chr3	+	2764	16	FSM	ENSG00000168036.18	ENST00000450969.6	2764	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	242.33581841917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCTTGTTAAATTTTT	-2	True	NA	NA	False	NA	NA	NA	41200111	41239906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_65906.known	chr3	+	3086	15	FSM	ENSG00000168036.18	ENST00000644873.1	3086	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	240.669728813881	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	33	False	NA	NA	False	NA	NA	NA	41199537	41239904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235726_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_65907.known	chr3	+	3283	15	FSM	ENSG00000168036.18	ENST00000643297.1	3283	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	227.98836346961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCTTGCTTTGAAG	-3	True	NA	NA	False	NA	NA	NA	41200110	41239960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_65908.known	chr3	+	2777	13	FSM	ENSG00000168036.18	ENST00000644138.1	2777	13	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_8	33.2001506020681	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGTACACAGACATACA	0	True	NA	NA	False	AATAAA	-42	NA	41199504	41237196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587
transcript_65909.known	chr3	+	4620	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	38.508566867935	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTATAGTTTTACTTT	0	True	NA	NA	False	ATTAAA	-20	NA	42160168	42212623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
transcript_6591.known	chr1	+	771	6	FSM	ENSG00000159208.16	ENST00000447007.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	26.9027879596149	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACAGCATCTCCTGTCA	-16	True	NA	NA	False	NA	NA	NA	150282542	150286737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150282619_150283513_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_65910.known	chr3	-	830	3	FSM	ENSG00000187094.12	ENST00000334681.9	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCGTTCCCTGCGTCTA	-6	True	NA	-4	True	ATTAAA	-16	NA	42264903	42257824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42258232_42263416_42263633_42264696
transcript_65911.known	chr3	-	747	3	FSM	ENSG00000187094.12	ENST00000434608.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCGTTCCCTGCGTCT	2236	False	NA	-5	True	ATTAAA	-15	NA	42263947	42257825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42258232_42263416_42263633_42263822
transcript_6592.known	chr1	+	1433	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.7812460746684	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-16	True	NA	20	True	ATTAAA	-21	NA	150282542	150287093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_65921.nic	chr3	+	1531	15	ISM	ENSG00000114857.19	ENST00000429888.5	7325	19	-59	11735	-32	0	5prime_fragment	FALSE	canonical	3	18	junction_8	32.7036788793692	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGGTTAAGCATAA	9744	False	NA	NA	False	CATAAA	-13	NA	42600622	42637000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42620015_42620044_42621428_42621517_42627199_42627228_42630545_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867
transcript_65931.nic	chr3	+	1475	13	ISM	ENSG00000114857.19	ENST00000232978.13	7265	17	-63	11735	-32	0	5prime_fragment	FALSE	canonical	3	29	junction_5	26.4727323024193	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGGTTAAGCATAA	9744	False	NA	NA	False	CATAAA	-13	NA	42600622	42637000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42621428_42621517_42630545_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867
transcript_6594.known	chr1	+	838	6	FSM	ENSG00000159208.16	ENST00000417398.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	44.3828795821091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCTGGAGAGGGTCCTC	213	False	NA	NA	False	NA	NA	NA	150282771	150286776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150282824_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_65944.known	chr3	-	1446	8	FSM	ENSG00000093183.14	ENST00000449617.5	1446	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	75.2090962800731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATACTTGCTGTTCA	4	True	NA	NA	False	NA	NA	NA	42581962	42548182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563881_42568864_42569074_42581845
transcript_65945.nic	chr3	-	1774	8	NIC	ENSG00000093183.14	novel	1446	8	NA	NA	9	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_6	69.996792929449	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	-12	True	NA	-24	True	AATAAA	-16	NA	42581978	42547970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563981_42568864_42569074_42581845
transcript_65953.known	chr3	-	1608	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	31.7144376515737	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	294	False	NA	-24	True	AATAAA	-16	NA	42582028	42547970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_65955.known	chr3	-	6340	7	FSM	ENSG00000093183.14	ENST00000264454.8	6340	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	48.7054639873415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-1	True	NA	-22	True	AATAAA	-18	NA	42581967	42547968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_6596.nic	chr1	+	1127	5	NIC	ENSG00000159208.16	novel	1179	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	38.8997107958401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	9726	False	NA	20	True	ATTAAA	-21	NA	150282518	150287093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150282619_150283461_150283634_150284425_150284505_150284596_150284709_150286429
transcript_65977.known	chr3	-	585	4	FSM	ENSG00000181061.14	ENST00000452906.3	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	1690.68197942592	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGGAGGAGCTTGC	2	True	NA	-117	True	NA	NA	NA	42804433	42785251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804171
transcript_65978.known	chr3	-	2722	4	FSM	ENSG00000181061.14	ENST00000321331.12	2722	4	0	0	0	0	multi-exon	FALSE	canonical	3	2649	junction_3	473.663969028208	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAAGTCATGTGACATT	1	True	NA	-10	True	ATTAAA	-17	NA	42804490	42782907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804435
transcript_65979.known	chr3	-	1322	4	FSM	ENSG00000181061.14	ENST00000418900.6	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1694.91992600109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATTAAAGTAAGTG	3	True	NA	-33	True	NA	NA	NA	42804488	42784329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42794156_42794300_42804435
transcript_65984.known	chr3	-	983	3	FSM	ENSG00000181061.14	ENST00000470543.1	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTTTCCATAAGAAT	3	True	NA	NA	False	AATGAA	-23	NA	42804488	42784525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_42785321_42786027_42786163_42804435
transcript_65990.nic	chr3	-	2794	14	NIC	ENSG00000160746.13	novel	3155	13	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	100.50134680719	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	5	True	NA	-34	True	ATTAAA	-6	NA	43622033	43366347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_43366975_43432610_43432728_43549719_43549849_43551471_43551589_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_65996.known	chr3	-	3155	13	FSM	ENSG00000160746.13	ENST00000292246.8	3155	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	21.6275287538822	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGAAGGTGAGAAGG	5521	False	43622038	NA	False	NA	NA	NA	43622011	43365847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_65999.nnic	chr3	-	2569	12	NIC	ENSG00000160746.13	novel	3155	13	NA	NA	-22	9	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	78.3852532934882	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTCTGCCTACATAGGT	5	True	NA	-25	True	ATTAAA	-15	NA	43622033	43366338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_43366975_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_66.known	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_5	2229.6709533023	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
transcript_6600.known	chr1	+	2011	5	FSM	ENSG00000159208.16	ENST00000290363.6	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-5	True	NA	20	True	ATTAAA	-21	NA	150282553	150287093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_66001.known	chr3	-	2419	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_10	78.5843758786147	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGGCAACCTCTCTGA	-11	True	NA	-45	True	CATAAA	-17	NA	43621984	43366358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
transcript_66003.known	chr3	-	2039	12	FSM	ENSG00000160746.13	ENST00000350459.8	2039	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	81.1643572793008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	8	True	NA	-34	True	ATTAAA	-6	NA	43621965	43366347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_66007.known	chr3	-	2019	11	FSM	ENSG00000160746.13	ENST00000451430.6	2019	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	87.5377061614022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGCTGCAGAGCCACTG	-30	True	NA	NA	False	NA	NA	NA	43622003	43366642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43605713_43605864_43621908
transcript_66024.nnic	chr3	+	1484	8	NIC	ENSG00000011198.10	novel	2630	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	60.1080659465661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATACCTTTAAATAAAA	-13	True	NA	-14	True	AATATA	-13	NA	43690885	43718762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_43691040_43699275_43699362_43701911_43702009_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_66026.nic	chr3	+	1508	8	NIC	ENSG00000011198.10	novel	1578	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	52.3278518729047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTCCCTCACTCCAGC	-13	True	NA	NA	False	ATTAAA	-16	NA	43690885	43734371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442_43718562_43734049
transcript_66027.nic	chr3	+	1694	7	NIC	ENSG00000011198.10	novel	523	4	NA	NA	137	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	54.239182229168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATACCTTTAAATAAAA	NA	False	NA	-14	True	AATATA	-13	NA	43690249	43718762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_43690711_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_66028.known	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	17.7200451466693	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	1	True	NA	2	True	AATAAA	-13	NA	43690937	43722725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_66032.known	chr3	+	1241	6	FSM	ENSG00000011198.10	ENST00000458276.7	1241	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	58.9474342104896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTACTGAAAAACTGTA	96	False	NA	21	True	AATAAA	-17	NA	43690879	43718797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43718442
transcript_66034.known	chr3	+	1255	6	FSM	ENSG00000011198.10	ENST00000643500.1	1255	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	61.4556750837545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATACCTTTAAATAAAA	7	True	NA	-14	True	AATATA	-13	NA	43690905	43718762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43717670_43717858_43718442
transcript_66036.known	chr3	+	618	2	FSM	ENSG00000011198.10	ENST00000486764.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATACT	-7	True	NA	NA	False	AATAAA	-14	NA	43690891	43699745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_43691040_43699275
transcript_66037.known	chr3	-	1069	1	FSM	ENSG00000272121.1	ENST00000606217.1	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTCTACACTGGATT	NA	False	NA	2	True	ATTAAA	-19	NA	43999149	43998080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_43998100_43999100
transcript_66040.known	chr3	+	1844	11	FSM	ENSG00000179152.20	ENST00000417237.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	16.7764716195033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTGCTTTAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	44338118	44407790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_66043.nic	chr3	+	3436	11	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	13.2875881934985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	NA	False	NA	6	True	AATAAA	-17	NA	44338108	44409448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_66045.known	chr3	+	3306	11	FSM	ENSG00000179152.20	ENST00000412611.6	3306	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	14.2579802216162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTTCTTGTTACCC	6	True	NA	9	True	AATAAA	-20	NA	44338756	44409451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_66058.nic	chr3	+	1192	5	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	26.2154534578367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	NA	False	NA	7	True	AATAAA	-13	NA	44338108	44363037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_66059.nic	chr3	+	867	5	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-10	-55	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	17.9774163883468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACCTAATTTTCCAGG	NA	False	NA	NA	False	AATAAA	-22	NA	44338108	44367824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367531
transcript_6606.known	chr1	+	1085	3	FSM	ENSG00000266472.6	ENST00000614145.5	1085	3	0	0	0	0	multi-exon	FALSE	canonical	3	2035	junction_1	903.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	-7	True	NA	8	True	AATAAA	-17	NA	150293860	150308979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150293899_150294334_150294450_150308047
transcript_66060.known	chr3	+	1056	5	FSM	ENSG00000179152.20	ENST00000444602.2	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	26.3853652618265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	9	True	NA	7	True	AATAAA	-13	NA	44338759	44363037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_66061.known	chr3	+	1998	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	20.757863302587	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGTTCTGTGAATC	NA	False	NA	11	True	AATAAA	-23	NA	44338118	44359804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
transcript_66062.known	chr3	+	2178	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	22.2910046630673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTGAGTTCTGTGAA	7	False	NA	9	True	AATAAA	-21	NA	44338451	44359802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
transcript_66063.known	chr3	-	612	1	FSM	ENSG00000271937.1	ENST00000607510.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCCGGCTTGTGTTGT	NA	False	NA	-1	True	TATAAA	-22	NA	44338552	44337940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44337900_44338600
transcript_66066.nnic	chr3	-	1800	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-11	3081	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_4	9.65336728815391	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	NA	False	NA	-8	True	AATAAA	-19	NA	44510647	44491765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44502964_44503057_44510552
transcript_66068.nnic	chr3	-	2128	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-11	3081	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	14.522013940528	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	NA	False	NA	-8	True	AATAAA	-19	NA	44510647	44491765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44492508_44499473_44500638_44502541_44502669_44510552
transcript_66069.nnic	chr3	-	1708	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-11	3081	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	2.35702260395516	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	NA	False	NA	-8	True	AATAAA	-19	NA	44510647	44491765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44510552
transcript_6607.known	chr1	+	1462	2	FSM	ENSG00000266472.6	ENST00000581066.2	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3842	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	52	False	NA	8	True	AATAAA	-17	NA	150293919	150308979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150294450_150308047
transcript_66071.nic	chr3	-	1180	4	NIC	ENSG00000178917.17	novel	1966	5	NA	NA	-11	-196	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	7.93025150224688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTCGGAGTAAATGTCT	NA	False	NA	NA	False	TATAAA	-22	NA	44510647	44499771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_44500638_44502541_44502669_44502964_44503057_44510552
transcript_66072.known	chr3	-	1326	3	FSM	ENSG00000178917.17	ENST00000489411.1	1326	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	-16	True	NA	NA	False	TATAAA	-19	NA	44510636	44499522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44500638_44502541_44502669_44510552
transcript_66073.nnic	chr3	-	1209	2	NNC	ENSG00000178917.17	novel	1966	5	NA	NA	-36	-6262	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGATTGTTTCTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	44510672	44505837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44506927_44510552
transcript_66077.known	chr3	+	7530	6	FSM	ENSG00000186448.15	ENST00000344387.9	7530	6	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	9.71596624119289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	-3	True	NA	9	True	AATAAA	-19	NA	44625035	44648471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
transcript_66078.known	chr3	+	2935	6	FSM	ENSG00000186448.15	ENST00000383745.6	2935	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	19.1039262980153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	10	True	NA	9	True	AATAAA	-19	NA	44625048	44648471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44625144_44629064_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
transcript_66080.known	chr3	+	5834	3	FSM	ENSG00000144792.9	ENST00000322734.2	5834	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCACTTTTTTTTTCTTTT	-6	True	NA	NA	False	AATAAA	-20	NA	44584963	44599694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44585008_44586104_44586214_44594013
transcript_66083.known	chr3	+	644	2	FSM	ENSG00000144792.9	ENST00000468987.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGGTAGTAGTGATGTG	-8	True	NA	NA	False	AAAAAG	-18	NA	44584961	44586702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44585008_44586104
transcript_66085.known	chr3	+	620	4	FSM	ENSG00000169981.11	ENST00000415571.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	10.5303793326209	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTCATCATATCAGAAAG	-7	True	NA	NA	False	NA	NA	NA	44648740	44658765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44648835_44650943_44651260_44652556_44652702_44658700
transcript_66087.known	chr3	+	2503	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	12.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	-6	True	NA	23	True	AATAAA	-23	NA	44648741	44660791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44648835_44650940_44651260_44658700
transcript_66088.known	chr3	+	1953	1	FSM	ENSG00000272077.1	ENST00000606008.1	1953	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTTGCAAATATTTTC	NA	False	NA	15	True	TATAAA	-21	NA	44667411	44669364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44667400_44669400
transcript_66089.known	chr3	+	3270	4	FSM	ENSG00000196653.12	ENST00000296091.8	3270	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.1455023315337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	-11	True	NA	20	True	ATTAAA	-22	NA	44712645	44723831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44712745_44714590_44714689_44720202_44720317_44720872
transcript_66091.known	chr3	+	3154	3	FSM	ENSG00000196653.12	ENST00000436624.7	3154	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	3	True	NA	20	True	ATTAAA	-22	NA	44712659	44723831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44712741_44720202_44720317_44720872
transcript_66093.known	chr3	+	3099	3	FSM	ENSG00000186446.12	ENST00000396048.6	3099	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	NA	False	NA	7	True	AATAAA	-19	NA	44729595	44737083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44729723_44731475_44731561_44734196
transcript_66095.known	chr3	+	3353	3	FSM	ENSG00000186446.12	ENST00000620116.5	3353	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	0	True	NA	7	True	AATAAA	-19	NA	44729634	44737083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44730016_44731475_44731561_44734196
transcript_66097.known	chr3	-	5079	3	FSM	ENSG00000163807.6	ENST00000296121.6	5079	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	27	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-4	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44753553_44754223_44754369_44761494
transcript_66098.nnic	chr3	-	894	3	NNC	ENSG00000163807.6	novel	5079	3	NA	NA	-50	-4290	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	153.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGTCCTGCTTCTC	NA	False	NA	-5	True	TATAAA	-18	NA	44761669	44753033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_44753608_44754223_44754369_44761494
transcript_66100.known	chr3	+	4760	35	FSM	ENSG00000163808.17	ENST00000326047.9	4760	35	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_21	24.0970679776837	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	6	True	NA	10	True	AATAAA	-21	NA	44761793	44853256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
transcript_66103.nic	chr3	+	2833	21	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-91	27097	-18	-1331	5prime_fragment	FALSE	canonical	3	136	junction_14	17.9311879137998	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGAAACTCTGAAATC	NA	False	NA	15	True	AAGAAA	-20	NA	44761702	44826159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038
transcript_66105.nic	chr3	+	1425	13	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-7	51445	-7	-11459	5prime_fragment	FALSE	canonical	3	162	junction_12	15.0277521051331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATTTATTCAATCTA	-1	True	NA	NA	False	AAAAAG	-32	NA	44761786	44801811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764
transcript_66108.nnic	chr3	+	1071	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	37.6327280730778	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	-15	True	NA	22	True	AATAAA	-22	NA	44861886	44865664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865039
transcript_66111.nnic	chr3	+	992	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	44.5296405654581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	-9	True	NA	22	True	AATAAA	-22	NA	44861892	44865664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862016_44862430_44862528_44864196_44864344_44865039
transcript_66114.nnic	chr3	+	1015	3	NNC	ENSG00000169964.8	novel	3071	2	NA	NA	-418	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	52.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	NA	False	NA	22	True	AATAAA	-22	NA	44861485	44865664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44861729_44864196_44864344_44865039
transcript_66116.known	chr3	+	977	3	FSM	ENSG00000169964.8	ENST00000302392.5	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	34.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	10	True	NA	22	True	AATAAA	-22	NA	44861911	44865664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44862117_44864196_44864344_44865039
transcript_66118.nnic	chr3	+	895	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_1	46	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	-9	True	NA	22	True	AATAAA	-22	NA	44861892	44865664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862016_44864196_44864344_44865039
transcript_6612.known	chr1	+	2414	16	FSM	ENSG00000117360.13	ENST00000324862.7	2414	16	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_1	49.6854103334168	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTCTACAGGTGATC	-19	True	NA	67	True	TTTAAA	-39	NA	150321532	150353233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150321593_150324894_150325088_150325750_150325882_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_66121.nnic	chr3	+	877	3	NNC	ENSG00000169964.8	novel	3071	2	NA	NA	344	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	54	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	354	False	NA	22	True	AATAAA	-22	NA	44862255	44865664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_44862361_44864196_44864344_44865039
transcript_66125.known	chr3	+	1395	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	315.831343441401	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAATAAAGTTTAGA	5	True	NA	-22	True	AAAACA	-30	NA	44976263	45012633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_66131.known	chr3	+	1042	8	FSM	ENSG00000075914.13	ENST00000265564.8	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_3	84.9196498978623	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	-15	True	NA	8	True	ATTAAA	-16	NA	44976243	45011471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_66137.known	chr3	+	831	7	FSM	ENSG00000075914.13	ENST00000468667.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	465.85313016968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCATTTGCTCTCTGCAT	-8	True	NA	NA	False	AAAACA	-43	NA	44976250	45012253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_44976335_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_66139.known	chr3	-	12594	7	FSM	ENSG00000163812.15	ENST00000424952.7	12594	7	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_1	26.5920831994955	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGAGTCTCCTGTTT	-18	True	NA	-5	True	AATAAA	-21	NA	44976174	44915260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_66143.known	chr3	+	4781	22	FSM	ENSG00000011376.12	ENST00000645846.2	4781	22	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_5	21.1783271754431	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTACAAGGAAGGAGTG	3	True	NA	NA	False	ATTAAA	-19	NA	45388575	45549407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_66145.nic	chr3	+	2120	17	ISM	ENSG00000011376.12	ENST00000645846.2	4781	22	-43	33290	-28	-22346	5prime_fragment	TRUE	canonical	3	163	junction_5	21.2249852767911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAAGAGAAGTTAGAGGTG	NA	False	NA	NA	False	NA	NA	NA	45388532	45516117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093
transcript_66147.known	chr3	+	2164	21	FSM	ENSG00000211456.13	ENST00000418611.5	2164	21	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_2	159.920441157471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGATGACAGAATTGATC	NA	False	NA	NA	False	NA	NA	NA	45689240	45743804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45689498_45690347_45690388_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_66150.known	chr3	+	1830	20	FSM	ENSG00000211456.13	ENST00000672858.2	1830	20	0	0	0	0	multi-exon	FALSE	canonical	2	340	junction_16	73.8155971476995	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTTTCCACATCAGCCC	23	False	NA	NA	False	NA	NA	NA	45689465	45743735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_66155.known	chr3	+	2013	19	FSM	ENSG00000211456.13	ENST00000441228.5	2013	19	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_3	131.039917111326	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTCATTGTATTCTAT	-18	True	NA	27	True	ATTAAA	-37	NA	45689354	45743935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_66160.known	chr3	+	854	4	FSM	ENSG00000211456.13	ENST00000463347.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	9.84321537348893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATGAAATGTGTATATA	-17	True	NA	NA	False	NA	NA	NA	45689355	45707318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779
transcript_66162.known	chr3	-	1384	2	FSM	ENSG00000230530.2	ENST00000655322.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTTTTCTTTCTA	NA	False	NA	0	True	TTTAAA	-24	NA	45689200	45679512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_45680072_45688375
transcript_66164.known	chr3	-	4026	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	6.58280588604383	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTTGGAAAATCCTTT	-14	True	NA	NA	False	ATTAAA	-25	NA	45842119	45823315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
transcript_66167.known	chr3	-	986	9	FSM	ENSG00000163818.19	ENST00000411866.5	986	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	14.456832294801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTTGTCATATCCCCT	-24	True	NA	NA	False	NA	NA	NA	45842129	45826240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45841988
transcript_66169.known	chr3	-	2721	17	FSM	ENSG00000012223.13	ENST00000231751.9	2721	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.78535710713571	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTATTCCAAAGCTA	0	True	NA	NA	False	TATAAA	-2	NA	46464905	46435644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_46436230_46437939_46438130_46439295_46439481_46441415_46441484_46443440_46443583_46445280_46445437_46446439_46446494_46447307_46447399_46448862_46449018_46449853_46450029_46450494_46450674_46454304_46454361_46455294_46455443_46455795_46455979_46456289_46456399_46459655_46459820_46464824
transcript_66173.known	chr3	-	4890	9	FSM	ENSG00000163827.14	ENST00000395905.8	4890	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	8.8175960442742	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTCTAAAAGCTT	-4	True	NA	NA	False	AATAAA	-19	NA	46566302	46515384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
transcript_66187.known	chr3	+	1192	6	FSM	ENSG00000241186.10	ENST00000542931.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	2	143	junction_1	2597.31738530354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGATTGAATTATAT	-1	True	NA	NA	False	NA	NA	NA	46574533	46581860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_46574584_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_66191.known	chr3	+	1956	6	FSM	ENSG00000241186.10	ENST00000296145.6	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	6013	junction_4	380.453623980637	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGTGAACTGGTTAT	-6	True	NA	22	True	AGTAAA	-18	NA	46577787	46582457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_662.known	chr1	+	626	4	FSM	ENSG00000251503.8	ENST00000470413.6	626	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	123.381071842033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	307	False	NA	15	True	AATAAA	-16	NA	10430383	10451659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10451376
transcript_6620.known	chr1	+	8186	11	FSM	ENSG00000163125.16	ENST00000369068.5	8186	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	16.3340135912763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	-14	True	NA	15	True	AATAAA	-16	NA	150364146	150476566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150441880_150441959_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
transcript_66202.known	chr3	+	643	4	FSM	ENSG00000241186.10	ENST00000493282.5	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6300	junction_2	306.411850655653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCATTCTCAGGAACTG	10	False	NA	NA	False	NA	NA	NA	46577747	46579936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738
transcript_66208.nnic	chr3	-	1417	3	Fusion	ENSG00000226074.5_ENSG00000286651.2	novel	855	5	NA	NA	-99	15	intron_retention	FALSE	canonical	0	0	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTCACTGGCGAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	46812585	46753029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr3_-_46753922_46754487_46754649_46812221
transcript_66209.known	chr3	-	885	7	FSM	ENSG00000160808.11	ENST00000292327.6	885	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	0.957427107756338	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTTATTTCCCTTC	-5	True	NA	0	True	AATAAA	-21	NA	46863444	46857871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_46858102_46858230_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
transcript_6622.known	chr1	+	7605	10	FSM	ENSG00000163125.16	ENST00000401000.8	7605	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	18.9665071919352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	15	False	NA	15	True	AATAAA	-16	NA	150364649	150476566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
transcript_66220.known	chr3	-	8541	21	FSM	ENSG00000181555.22	ENST00000409792.4	8541	21	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_20	31.1289254552739	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATGTGTGTTCCCTA	-10	True	NA	-28	True	AATAAA	-14	NA	47164113	47016435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47017255_47017637_47017740_47019759_47019841_47037665_47037778_47042560_47042701_47046486_47046622_47056820_47057491_47062162_47062347_47067069_47067119_47083719_47084383_47086194_47086315_47088112_47088248_47097954_47098082_47101457_47101556_47103345_47103424_47105996_47106121_47113875_47114005_47116622_47116755_47120181_47124549_47126647_47126664_47163853
transcript_66222.known	chr3	+	4622	10	FSM	ENSG00000114648.12	ENST00000232766.6	4622	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	11.8613387956289	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	-2	True	NA	17	True	AATAAA	-17	NA	47282943	47346816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_66225.nic	chr3	-	713	4	ISM	ENSG00000088727.14	ENST00000452770.6	2707	22	-23	46576	-23	0	5prime_fragment	FALSE	canonical	3	9	junction_3	48.1456124688429	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	3	True	NA	-5	True	AATAAA	-22	NA	47282600	47275227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_47275491_47277281_47277380_47282139_47282386_47282494
transcript_66226.known	chr3	-	740	3	FSM	ENSG00000088727.14	ENST00000425853.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	49.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	265	False	NA	-5	True	AATAAA	-22	NA	47282518	47275227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47275491_47277281_47277380_47282139
transcript_66227.known	chr3	+	375	2	FSM	ENSG00000114648.12	ENST00000483201.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	13	False	NA	23	True	AGTAAA	-16	NA	47282958	47287458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47283095_47287219
transcript_66229.known	chr3	-	633	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	8.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	17	True	NA	-5	True	AATAAA	-22	NA	47282766	47275227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47275491_47277281_47277380_47282494
transcript_6623.known	chr1	+	1043	3	FSM	ENSG00000163125.16	ENST00000369067.7	1043	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGGTATTTTTAAGCC	14	True	NA	NA	False	TTTAAA	-45	NA	150364707	150441623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150364920_150417595_150417726_150440922
transcript_66237.nic	chr3	-	1575	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	78.1487186217549	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	307	False	NA	-1	True	AATAAA	-19	NA	47513390	47495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47512991
transcript_66238.nic	chr3	-	1369	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	88.3157215147262	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	314	False	NA	-1	True	AATAAA	-19	NA	47513383	47495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_66239.nic	chr3	-	1342	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	90.1377032964317	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	309	False	NA	-1	True	AATAAA	-19	NA	47513388	47495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513222
transcript_6624.known	chr1	+	2727	18	FSM	ENSG00000143374.18	ENST00000369064.8	2727	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_8	37.5484922913877	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	-5	True	NA	15	True	AATAAA	-29	NA	150487418	150507602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_66240.known	chr3	-	880	7	FSM	ENSG00000163832.16	ENST00000439305.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	83.5871135735381	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGTGGAAGATAGAGCAA	284	False	NA	NA	False	NA	NA	NA	47513413	47496028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513320
transcript_66241.known	chr3	-	1352	7	FSM	ENSG00000163832.16	ENST00000296149.9	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	35.7024742373224	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-15	True	NA	-1	True	AATAAA	-19	NA	47513712	47495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_66247.nic	chr3	-	1504	6	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	105.438892255183	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	307	False	NA	-1	True	AATAAA	-19	NA	47513390	47495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47512991
transcript_66250.known	chr3	-	1277	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	86.2429127522952	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCTGTGGGTTGTCTT	-12	True	NA	-2	True	AATAAA	-18	NA	47513709	47495640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
transcript_66259.nic	chr3	-	1202	5	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	105.504443034405	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-15	True	NA	-1	True	AATAAA	-19	NA	47513712	47495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47513536
transcript_66264.nnic	chr3	-	1031	5	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	85.0775381637245	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	NA	False	NA	-1	True	AATAAA	-19	NA	47513740	47495639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47496198_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_66266.known	chr3	-	557	5	FSM	ENSG00000163832.16	ENST00000414236.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	99.9008883844383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGGCGGTGGCTGTGCT	-7	True	NA	NA	False	NA	NA	NA	47513342	47501715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_66267.known	chr3	-	579	5	FSM	ENSG00000163832.16	ENST00000449409.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	102.04410811017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAAAGGTACTCATGGA	-4	True	NA	NA	False	NA	NA	NA	47513339	47501658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513222
transcript_66268.nic	chr3	-	888	5	ISM	ENSG00000163832.16	ENST00000296149.9	1352	7	-28	5797	-28	90	5prime_fragment	FALSE	canonical	3	159	junction_4	36.8128713903167	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGGGCTGGTTATGT	NA	False	NA	-3	True	AATAAA	-19	NA	47513740	47501436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_6627.nnic	chr1	+	2585	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	66.9743421020319	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	-10	True	NA	15	True	AATAAA	-29	NA	150487413	150507602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_66274.known	chr3	-	6354	28	FSM	ENSG00000173473.11	ENST00000254480.10	6354	28	0	0	0	0	multi-exon	FALSE	canonical	3	1370	junction_8	88.7732581244188	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTGAATTATTTTT	-23	True	NA	71	True	TATAAA	-1	NA	47781893	47585268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47588307_47590660_47590838_47610065_47610328_47622206_47622342_47635189_47635345_47636021_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_66278.known	chr3	+	3855	22	FSM	ENSG00000132153.15	ENST00000445061.6	3855	22	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	152.745842879624	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTGTCCACTAGGGG	-21	True	NA	25	True	AATAAA	-21	NA	47803137	47850193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_66280.known	chr3	+	1957	9	FSM	ENSG00000132153.15	ENST00000441384.5	1957	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	287.017856587356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTGGCGTTTCCTT	-21	True	NA	3	True	AATAAA	-17	NA	47803137	47842679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616
transcript_66284.nnic	chr3	+	558	4	NNC	ENSG00000132153.15	novel	1464	4	NA	NA	0	-792	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	250.735362927175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTATAATATTATAAGAG	-2	True	NA	98	True	AATAAA	-16	NA	47803106	47816180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_47803213_47805325_47805421_47810572_47810712_47815962
transcript_66285.known	chr3	+	1464	4	FSM	ENSG00000132153.15	ENST00000472718.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	112.07834561393	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTTCAGCTCCT	3	False	NA	47	True	NA	NA	NA	47802908	47816972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47815962
transcript_66287.known	chr3	+	3748	19	FSM	ENSG00000132153.15	ENST00000457607.1	3748	19	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	77.4583320881398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	5	True	NA	19	True	AATAAA	-15	NA	47825027	47850187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_66288.known	chr3	-	5142	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_6	75.3862686845081	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGCCGGCACCCACAC	-14	True	NA	NA	False	GATAAA	-44	NA	48089272	47851867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_6629.known	chr1	+	2162	16	FSM	ENSG00000143374.18	ENST00000606933.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	56.7244411362705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCAGGCGCAGTGGCT	-4	True	NA	NA	False	AATAAA	-1	NA	150487419	150507284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_66297.nnic	chr3	-	1235	6	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-94	157	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	159.18919561327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACAAGAAAGAAACAGA	-1	True	NA	NA	False	TATAAA	-41	NA	48088935	47916704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47998637_47998880_48088772
transcript_66300.known	chr3	-	1353	7	FSM	ENSG00000172113.10	ENST00000452211.5	1353	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	70.3027184554212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTAATTGACTTGCC	278	False	NA	-113	True	AAAAAG	-3	NA	48301305	48294082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300430_48300635_48301278
transcript_66301.known	chr3	-	913	7	FSM	ENSG00000172113.10	ENST00000415053.5	913	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	69.850833129526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGTGGTTCAGAAGAA	258	False	NA	NA	False	NA	NA	NA	48301325	48294446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300526_48300635_48301278
transcript_66309.known	chr3	-	613	6	FSM	ENSG00000172113.10	ENST00000425930.5	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	59.5294884909992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATGTAGCTGGAACAGG	22	True	NA	NA	False	NA	NA	NA	48301353	48294675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301269
transcript_66310.known	chr3	-	2004	6	FSM	ENSG00000172113.10	ENST00000421967.5	2004	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	42.5064700957395	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTATCTGAAAGCATCA	17	True	NA	NA	False	TATAAA	-3	NA	48301358	48293263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301295
transcript_66311.known	chr3	-	2903	6	FSM	ENSG00000172113.10	ENST00000442597.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	39.3212410790911	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	8	True	NA	-3	True	AATAAA	-21	NA	48301367	48292316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301352
transcript_66314.known	chr3	-	794	6	FSM	ENSG00000172113.10	ENST00000418431.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	63.0542623460143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTGCCTGAGGGCCTA	-12	True	NA	NA	False	NA	NA	NA	48301387	48294523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296237_48296726_48296830_48298426_48298524_48301352
transcript_66328.known	chr3	-	599	5	FSM	ENSG00000172113.10	ENST00000435684.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	68.5870796870664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGACCAGCCTGATG	8	True	NA	NA	False	NA	NA	NA	48301367	48294654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301278
transcript_66332.known	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	63.8807482736388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
transcript_66333.known	chr3	+	3367	4	FSM	ENSG00000164048.14	ENST00000354698.8	3367	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_3	62.4517591603489	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	-2	True	NA	-26	True	AATGAA	-38	NA	48241103	48270990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267914
transcript_66334.nic	chr3	+	3416	4	ISM	ENSG00000164048.14	ENST00000440261.6	917	5	-54	15640	-48	0	5prime_fragment	FALSE	canonical	3	128	junction_3	142.129049341318	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	-20	True	NA	-26	True	AATGAA	-38	NA	48241051	48270990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267917
transcript_66335.nnic	chr3	+	2922	4	NNC	ENSG00000164048.14	novel	1677	4	NA	NA	-48	7778	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	195.94953998982	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGAGTGCTGGTTTT	-20	True	NA	NA	False	AGTAAA	-18	NA	48241051	48278768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_48241215_48247624_48247678_48260812_48260940_48276189
transcript_66336.known	chr3	+	1677	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	185.167191718428	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	-6	True	NA	NA	False	AATAAA	-26	NA	48241099	48287627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
transcript_66337.known	chr3	+	593	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	181.418484908971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	-5	True	NA	28	True	AATAAA	-19	NA	48241100	48299253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
transcript_66340.known	chr3	-	866	3	FSM	ENSG00000172113.10	ENST00000444069.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	72	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGCAGTGAGCCGAGAT	37	True	NA	NA	False	NA	NA	NA	48301338	48294158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48301278
transcript_66342.known	chr3	-	2254	3	FSM	ENSG00000172113.10	ENST00000643011.1	2254	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	72.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGAGTTCCAGACCA	8	True	NA	NA	False	NA	NA	NA	48301367	48292782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48301295
transcript_66343.known	chr3	-	1209	5	FSM	ENSG00000172113.10	ENST00000426689.6	1209	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	21.2955394390469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTATGCTGCCACAT	3059	False	NA	-27	True	AATAAA	-17	NA	48298524	48293996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426
transcript_66346.known	chr3	-	1461	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_3	55.7992433242204	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-16	True	NA	4	True	ATTAAA	-35	NA	48440081	48432163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
transcript_66347.known	chr3	-	1385	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	97.5329004319397	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGAGTTTTTTTCAT	11	True	NA	-2	True	ATTAAA	-29	NA	48440119	48432169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
transcript_66348.known	chr3	-	1611	4	FSM	ENSG00000164051.14	ENST00000395694.7	1611	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	67.8347665696253	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGACTGAGTTTTTTT	11	True	NA	-5	True	ATTAAA	-26	NA	48440119	48432172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48433167_48433706_48433872_48434816_48435137_48439987
transcript_66350.known	chr3	-	1554	4	FSM	ENSG00000164051.14	ENST00000442740.1	1554	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	100.982946855177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTTTTATTATTTAA	30	False	48440130	-27	True	ATTAAA	-4	NA	48440100	48432194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48433167_48433706_48433977_48434816_48435016_48439987
transcript_66355.known	chr3	+	561	4	FSM	ENSG00000232112.3	ENST00000438607.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_1	2540.30868640451	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTTCTTGTGTGGTTGT	-2	True	NA	19	True	ATTAAA	-19	NA	48440256	48444208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48440313_48440402_48440459_48440540_48440629_48443847
transcript_66356.known	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	16226	junction_1	771.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	6	False	NA	14	True	ATTAAA	-14	NA	48440283	48444203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48440459_48440540_48440629_48443847
transcript_66358.known	chr3	+	1096	2	FSM	ENSG00000213689.14	ENST00000625293.3	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	-27	True	NA	4	True	AATAAA	-19	NA	48466229	48467645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48466310_48466629
transcript_6636.known	chr1	+	2046	10	FSM	ENSG00000143369.15	ENST00000369047.9	2046	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.3356476460191	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCATCTTGAATTTAT	1	True	NA	NA	False	ACTAAA	-14	NA	150508108	150513789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150508280_150509530_150509582_150509660_150509763_150509921_150510003_150510101_150510183_150510875_150511199_150511456_150511832_150512351_150512573_150512724_150512813_150513236
transcript_66361.known	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_4	522.054173434137	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-28	True	NA	-29	True	AATAAA	-15	NA	48504174	48467875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
transcript_66362.known	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	742.038974717636	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-4	True	NA	-30	True	AATAAA	-14	NA	48504795	48467876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
transcript_66363.known	chr3	-	2081	6	FSM	ENSG00000164054.17	ENST00000444115.5	2081	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	743.865417935261	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTTCTTCCTGGCCT	11	False	NA	-23	True	AATAAA	-21	NA	48504826	48467869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504629
transcript_66369.known	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	341.440412891555	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	6316	False	NA	-29	True	AATAAA	-15	NA	48473208	48467875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
transcript_6637.known	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	21.5	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-7	True	NA	31	True	AATAAA	-14	NA	150579610	150574557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150577492_150578243_150578492_150578842
transcript_66370.known	chr3	-	1739	4	FSM	ENSG00000164054.17	ENST00000465449.5	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	904.71026669684	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	5992	False	NA	-29	True	AATAAA	-15	NA	48473532	48467875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473433
transcript_66371.known	chr3	-	1908	3	FSM	ENSG00000164054.17	ENST00000494854.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_2	376	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-9	True	NA	-29	True	AATAAA	-15	NA	48473103	48467875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48469574_48469727_48469844_48473009
transcript_66373.known	chr3	-	3499	14	FSM	ENSG00000114268.12	ENST00000232375.8	3499	14	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_6	8.21673858044713	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-2	True	NA	-30	True	AATAAA	-18	NA	48556803	48517683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_66379.known	chr3	-	1595	13	FSM	ENSG00000010256.11	ENST00000203407.6	1595	13	0	0	0	0	multi-exon	FALSE	canonical	3	2917	junction_12	172.385710931426	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	1	True	NA	-14	True	AATAAA	-16	NA	48609646	48599001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
transcript_66392.known	chr3	-	778	6	FSM	ENSG00000010256.11	ENST00000412343.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	1291.73765138282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATGGAATCACTGAA	11	True	NA	NA	False	NA	NA	NA	48609636	48603562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609496
transcript_66395.known	chr3	-	2630	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	0	0	0	multi-exon	FALSE	canonical	2	116	junction_5	42.8460908368546	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-28	True	NA	-5	True	AATAAA	-16	NA	48635483	48625722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_66398.known	chr3	-	2611	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_4	46.0480998522197	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-6	True	NA	-5	True	AATAAA	-16	NA	48635461	48625722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_66404.known	chr3	+	196	3	FSM	ENSG00000228350.1	ENST00000421275.1	196	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGATGGGGGTCT	7025	False	NA	NA	False	ATTAAA	-24	NA	48663775	48669174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48663814_48665640_48665723_48669098
transcript_6641.known	chr1	-	725	5	FSM	ENSG00000143420.19	ENST00000361631.9	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	374.696543885849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAATTAGGGCTTGGA	5	True	NA	NA	False	NA	NA	NA	150629128	150622543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629060
transcript_66411.nic	chr3	-	1743	6	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	283	junction_5	51.5325140081483	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-16	True	NA	-3	True	AATACA	-20	NA	48717221	48688002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695419_48717156
transcript_66412.known	chr3	-	1746	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_5	17.8728844901991	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-16	True	NA	-3	True	AATACA	-20	NA	48717221	48688002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
transcript_6642.known	chr1	-	633	5	FSM	ENSG00000143420.19	ENST00000339643.9	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	572.473798527059	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGGCTGGAGAGGCA	18	True	NA	NA	False	NA	NA	NA	150629576	150622730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629413
transcript_66428.known	chr3	-	1309	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	154.615652506465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	48717278	48693452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
transcript_66430.known	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	78.6652542246081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	2	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
transcript_66431.nic	chr3	-	1336	4	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	120.999540862306	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAATGTGTCTTGTAA	NA	False	NA	-8	True	AATAAA	-13	NA	48717244	48693455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48694693_48694825_48695089_48695422_48717156
transcript_66449.nic	chr3	-	1269	3	NIC	ENSG00000068745.15	novel	1185	3	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	57	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	NA	False	NA	0	True	AATAAA	-21	NA	48717303	48693447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48695089_48695419_48717156
transcript_66450.known	chr3	-	1185	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	103.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-11	True	NA	0	True	AATAAA	-21	NA	48717216	48693447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48695089_48695422_48717156
transcript_66451.known	chr3	-	2490	9	FSM	ENSG00000068745.15	ENST00000433104.2	2490	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	123.79393159602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAATGTGTCTTGTAA	NA	False	NA	-8	True	AATAAA	-13	NA	48740353	48693455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48694241_48694693_48695422_48717156_48717488_48717869_48717890_48718647_48718758_48729654_48729778_48738881_48738967_48739586_48739747_48740205
transcript_66456.nic	chr3	-	860	3	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	0	16	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	57	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGGCCTGGGTGCCTAC	-10	True	NA	45	True	AATAAA	-18	NA	48717215	48693768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_48694241_48695089_48695419_48717156
transcript_66458.known	chr3	-	2174	3	FSM	ENSG00000068745.15	ENST00000431721.6	2174	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAATGTTTTCAGTCTTT	-11	True	NA	-73	True	ATTAAA	-20	NA	48717216	48693520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48695422_48715314_48715528_48717156
transcript_66459.known	chr3	-	1124	2	FSM	ENSG00000068745.15	ENST00000417896.1	1124	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGGGTGCCTTTCTCT	-1	True	NA	NA	False	NA	NA	NA	48717206	48694344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48695419_48717156
transcript_66460.known	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	13	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48695422_48717156
transcript_66463.known	chr3	-	1778	9	FSM	ENSG00000178537.10	ENST00000319017.5	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	5.88960949469487	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTATATTTTCTT	-3	True	NA	-2	True	AATAAA	-25	NA	48898882	48856925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
transcript_66465.known	chr3	+	2278	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	165.665219173338	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	-21	True	NA	-56	True	NA	NA	NA	48918835	48983620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_66468.known	chr3	+	4912	16	FSM	ENSG00000177479.20	ENST00000356401.9	4912	16	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	86.4256649124296	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATGATCTCTGCTCA	-15	True	NA	NA	False	NA	NA	NA	48918841	48986382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48918999_48922747_48922812_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_66480.known	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_11	29.7151768552232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-5	True	NA	-13	True	AATAAA	-21	NA	49018580	49015487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_66484.nic	chr3	-	1514	10	ISM	ENSG00000178149.17	ENST00000341949.9	1748	12	468	0	-91	0	intron_retention	TRUE	canonical	3	161	junction_3	26.1070918892469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	2	True	NA	-13	True	AATAAA	-21	NA	49018112	49015487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612
transcript_66485.known	chr3	+	1771	9	FSM	ENSG00000178467.18	ENST00000383729.9	1771	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	14.9979165219706	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCGATAGGTGCAGCGG	2	True	NA	65	True	NA	NA	NA	48990240	49007153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005047_49005776_49005868_49006063_49006188_49006686
transcript_66488.known	chr3	+	2796	8	FSM	ENSG00000178467.18	ENST00000472301.5	2796	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	12.5324069711207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	16	False	NA	27	True	AATAAA	-17	NA	48989907	49007115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005868_49006063_49006188_49006686
transcript_66493.known	chr3	+	4070	6	FSM	ENSG00000178252.19	ENST00000608424.6	4070	6	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_1	47.2330392839589	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTCTATGCCTCA	4	True	NA	13	True	AATAAA	-18	NA	49007390	49015951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_66494.known	chr3	+	3656	6	FSM	ENSG00000178252.19	ENST00000420783.7	3656	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.270176575278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCCCATGCTCAGCAT	16	True	NA	NA	False	NA	NA	NA	49007402	49015358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49007532_49008926_49009025_49011634_49014294_49014382_49014500_49014599_49014719_49014824
transcript_66499.known	chr3	+	3565	5	FSM	ENSG00000178252.19	ENST00000471162.5	3565	5	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_1	46.1864428160472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCAGCATGCCTTGA	16	True	NA	NA	False	NA	NA	NA	49007402	49015365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49007532_49011634_49014294_49014382_49014500_49014599_49014719_49014824
transcript_66501.known	chr3	+	902	5	FSM	ENSG00000178057.15	ENST00000326925.11	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	48.602983447521	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTTTTTCTTTT	9	True	NA	NA	False	NA	NA	NA	49022120	49023495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49022222_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_66505.nic	chr3	+	1417	3	ISM	ENSG00000177479.20	ENST00000430423.5	753	6	35	38480	0	715	5prime_fragment	FALSE	canonical	3	426	junction_2	182	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAAGGTGTGCCTTGTA	-1	True	NA	17	True	AATAAA	-24	NA	48918855	48928671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_48918999_48922747_48922812_48927461
transcript_66507.known	chr3	-	1042	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTGGCTGGTCGCT	1078	False	NA	NA	False	AATAAA	-35	NA	48918823	48917781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48917800_48918800
transcript_66508.known	chr3	-	479	1	FSM	ENSG00000273211.1	ENST00000609473.1	479	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTGCCTCAATTAACT	NA	False	NA	-2	True	AATAAA	-20	NA	48985963	48985484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_48985500_48986000
transcript_6651.known	chr1	-	792	4	FSM	ENSG00000143420.19	ENST00000361532.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	440.182537893845	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGGGTTCTAGTT	-7	True	NA	NA	False	NA	NA	NA	150629140	150622440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629060
transcript_66510.known	chr3	-	1751	15	FSM	ENSG00000178035.13	ENST00000429182.6	1751	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	758.933976451341	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	9	True	NA	31	True	AATAAA	-18	NA	49029426	49024324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_6652.known	chr1	-	360	4	FSM	ENSG00000143420.19	ENST00000638926.1	360	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	552.514856512173	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCGGGGCTCTGCCA	124	False	NA	NA	False	NA	NA	NA	150629470	150622843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150622860_150625641_150625803_150627466_150627593_150629413
transcript_66522.known	chr3	-	1704	14	FSM	ENSG00000178035.13	ENST00000677480.1	1704	14	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	620.893667825307	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	15	True	NA	13	True	NA	NA	NA	49029420	49024342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028198_49028323_49028430_49028533_49028757_49028807_49029252
transcript_66525.known	chr3	-	1628	14	FSM	ENSG00000178035.13	ENST00000679117.1	1628	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	622.336768361341	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-13	True	NA	31	True	AATAAA	-18	NA	49029416	49024324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028766_49029252
transcript_66526.known	chr3	-	1651	14	FSM	ENSG00000178035.13	ENST00000326739.9	1651	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	273.715007490353	3796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	5	True	NA	31	True	AATAAA	-18	NA	49029398	49024324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_66534.known	chr3	-	1881	13	FSM	ENSG00000178035.13	ENST00000676607.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	276.406051951754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	14	True	NA	13	True	NA	NA	NA	49029421	49024342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028807_49029252
transcript_66536.known	chr3	-	1538	13	FSM	ENSG00000178035.13	ENST00000442157.2	1538	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	640.238215215417	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	3788	False	NA	13	True	NA	NA	NA	49029378	49024342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028430_49028533_49028757_49028807_49029252
transcript_66546.known	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	283.116142245546	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-13	True	NA	31	True	AATAAA	-18	NA	49029416	49024324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_66549.known	chr3	-	2110	12	FSM	ENSG00000178035.13	ENST00000462980.2	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	296.577390844836	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTGATGCCTGAT	9	True	NA	23	True	AATAAA	-10	NA	49029426	49024332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49028533_49028757_49028807_49029252
transcript_6656.known	chr1	-	574	4	FSM	ENSG00000143420.19	ENST00000503241.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	616.832950553786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCAGCTTGCTAGCCAG	35	False	NA	NA	False	NA	NA	NA	150629559	150625554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150626478_150626527_150627466_150627593_150629413
transcript_66561.known	chr3	-	1657	14	FSM	ENSG00000178035.13	ENST00000677010.1	1657	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	783.00054032794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	5	True	NA	13	True	NA	NA	NA	49029398	49024342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026598_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028721_49028807_49029252
transcript_66562.known	chr3	-	2078	13	FSM	ENSG00000178035.13	ENST00000678001.1	2078	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	284.876727726222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	6	True	NA	13	True	NA	NA	NA	49029397	49024342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757
transcript_66563.known	chr3	-	2758	10	FSM	ENSG00000178035.13	ENST00000677991.1	2758	10	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	317.256293169348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-10	True	NA	13	True	NA	NA	NA	49029413	49024342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709
transcript_66569.known	chr3	-	2449	24	FSM	ENSG00000172053.18	ENST00000306125.12	2449	24	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_23	69.8832675073563	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	-4	True	NA	-3	True	AATAAA	-22	NA	49104757	49095931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_6658.known	chr1	-	793	3	FSM	ENSG00000143420.19	ENST00000503345.1	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	668.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTAGATTGACACTT	13	True	NA	NA	False	GGGGCT	-45	NA	150629581	150625464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150627311_150627593_150629413
transcript_66588.nic	chr3	-	2365	23	NIC	ENSG00000172053.18	novel	2449	24	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	147.887640228085	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	7014	False	NA	-4	True	AATAAA	-21	NA	49104800	49095932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_6659.known	chr1	-	1369	3	FSM	ENSG00000143420.19	ENST00000513281.5	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	529	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACCTTATAGATATC	17	True	NA	NA	False	AGTAAA	-29	NA	150629116	150624621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150627466_150627593_150629060
transcript_6660.known	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	24	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	17	True	NA	-3	True	ATTAAA	-28	NA	150629577	150623280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150625809_150627466_150627593_150629413
transcript_66600.known	chr3	-	2362	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_18	64.6352768096839	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGTCTGTGTGTTAT	-33	True	NA	-10	True	AATAAA	-15	NA	49104532	49095938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
transcript_66603.known	chr3	-	1021	5	FSM	ENSG00000172037.14	ENST00000498377.1	1021	5	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	9.86154146165801	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTGCAGATCTACAACA	10042	False	NA	NA	False	NA	NA	NA	49122598	49121256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162
transcript_66605.known	chr3	-	1791	2	FSM	ENSG00000177352.10	ENST00000321895.7	1791	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAGTCTCCCTGCCCA	3	True	NA	NA	False	NA	NA	NA	49166331	49162534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49164261_49166266
transcript_66607.nic	chr3	+	1677	6	NIC	ENSG00000185909.15	novel	1972	6	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	32.0649341181297	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	NA	False	NA	25	True	AGTAAA	-18	NA	49171548	49176486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_49171686_49172635_49172802_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_66608.nnic	chr3	+	2042	6	NNC	ENSG00000185909.15	novel	1972	6	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	31.0457726590916	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	NA	False	NA	25	True	AGTAAA	-18	NA	49171548	49176486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_49171686_49172635_49173146_49174238_49174404_49174720_49174967_49175061_49175164_49175604
transcript_66609.known	chr3	+	1972	6	FSM	ENSG00000185909.15	ENST00000332780.4	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	7.52595508889071	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	-13	True	NA	25	True	AGTAAA	-18	NA	49171597	49176486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49171686_49172635_49173146_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_66613.known	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_16	33.2917427608472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-16	True	NA	NA	False	NA	NA	NA	49340053	49277143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66615.known	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_15	32.0019921254912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	4	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66622.known	chr3	-	1454	7	FSM	ENSG00000114316.13	ENST00000415188.1	1454	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	80.5655357802302	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCATCCCAGAACCCAAA	1	True	NA	NA	False	NA	NA	NA	49340036	49316731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49317479_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66623.nic	chr3	-	1458	6	ISM	ENSG00000114316.13	ENST00000415188.1	1454	7	-52	7271	-35	694	5prime_fragment	FALSE	canonical	3	213	junction_1	14.1081536708387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAAAGTGATAGCTT	5078	False	NA	NA	False	AAAACA	-5	NA	49340088	49324002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66624.known	chr3	-	601	5	FSM	ENSG00000114316.13	ENST00000464168.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	92.4310553872453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTCTCCCTTGTT	-16	True	NA	NA	False	AATGAA	-41	NA	49340053	49324696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49339923
transcript_66625.known	chr3	-	1536	7	FSM	ENSG00000114316.13	ENST00000416417.5	1536	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.3515605533308	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCTTTTTGTAATTTA	1	True	NA	NA	False	AATAAA	-23	NA	49340036	49311784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49312614_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_66626.known	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	3	True	NA	-39	True	NA	NA	NA	49358325	49357200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49357748_49358164
transcript_66627.known	chr3	-	899	2	FSM	ENSG00000233276.8	ENST00000419783.3	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	2377	junction_1	0	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTATGTCCTGTGTC	10	True	NA	-14	True	AATAAA	-20	NA	49358353	49357175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49357748_49358026
transcript_66628.known	chr3	-	1944	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1186.04714914712	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCCTGTTGTTTGTGTTG	4	True	NA	-4	True	AATAAA	-21	NA	49411970	49359138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_66636.known	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1076.37966698559	3527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-2	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_66639.known	chr3	-	1641	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1135.62082873936	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	46	True	NA	-5	True	AATAAA	-20	NA	49411928	49359139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
transcript_66642.known	chr3	+	2146	3	FSM	ENSG00000145022.5	ENST00000273590.4	1930	3	-217	1	-6	-1	multi-exon	TRUE	canonical	3	39	junction_2	0.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTGTTGTGGTTATTC	-6	True	NA	20	True	ATTAAA	-12	NA	49412205	49416475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49412641_49413055_49413111_49414819
transcript_66643.known	chr3	-	1582	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	846.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-26	True	NA	-5	True	AATAAA	-20	NA	49412000	49359139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49360383_49375433_49375592_49411819
transcript_66650.known	chr3	-	1646	10	FSM	ENSG00000145020.16	ENST00000427987.6	1646	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	189.946191210973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCCCTGGTATGCA	4	True	NA	-82	True	NA	NA	NA	49422458	49416852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66651.known	chr3	-	1831	10	FSM	ENSG00000145020.16	ENST00000395338.7	1831	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	156.624107694541	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	6738	False	NA	-7	True	ATTAAA	-19	NA	49422554	49416777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66665.known	chr3	-	1827	9	FSM	ENSG00000145020.16	ENST00000636070.1	1827	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	218.123495696819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCACTGAATCCTGAAAA	11	True	NA	-55	True	NA	NA	NA	49422451	49416825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49421981_49422050_49422360
transcript_66667.known	chr3	-	2038	9	FSM	ENSG00000145020.16	ENST00000538581.6	2038	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_8	152.849394830336	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTAGCTTCATTGTTC	6763	False	NA	-8	True	ATTAAA	-18	NA	49422529	49416778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66669.known	chr3	-	1997	9	FSM	ENSG00000145020.16	ENST00000273588.9	1997	9	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_3	76.9086308550607	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	-11	True	NA	-7	True	ATTAAA	-19	NA	49422473	49416777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_6667.known	chr1	-	703	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1345	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAATCAGTTTCTTCA	17	True	NA	-27	True	AATAAA	-11	NA	150629577	150627053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150627593_150629413
transcript_66675.known	chr3	-	1620	8	FSM	ENSG00000145020.16	ENST00000636522.1	1620	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	179.665448735665	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCCACATTCCCAAGT	-11	True	NA	NA	False	NA	NA	NA	49422473	49416986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422360
transcript_66678.known	chr3	-	1783	8	FSM	ENSG00000145020.16	ENST00000638063.1	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	168.492354335109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCAGGGTGGGCTTCCT	2	True	NA	-127	True	NA	NA	NA	49422460	49416897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49422103_49422272_49422360
transcript_66679.known	chr3	-	1860	8	FSM	ENSG00000145020.16	ENST00000458307.6	1860	8	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_5	187.308759615164	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTAGCTTCATTGTTC	-7	True	NA	-8	True	ATTAAA	-18	NA	49422469	49416778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49421491_49421573_49422103_49422272_49422360
transcript_66680.known	chr3	-	2403	8	FSM	ENSG00000145020.16	ENST00000636991.1	2403	8	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	78.3414817009612	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-11	True	NA	-23	True	ATTAAA	-3	NA	49422473	49416793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66685.known	chr3	-	1991	8	FSM	ENSG00000145020.16	ENST00000637114.1	1991	8	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_4	60.8832941799644	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGATCTTTGCCCCT	-5	True	NA	-90	True	NA	NA	NA	49422442	49416860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66686.known	chr3	-	1823	8	FSM	ENSG00000145020.16	ENST00000637682.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	187.105557896922	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTAGCTTCATTGTT	5	True	NA	-9	True	ATTAAA	-17	NA	49422457	49416779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66690.known	chr3	-	2855	7	FSM	ENSG00000145020.16	ENST00000637268.1	2855	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	275.089934789011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTCTTACTTGCCA	-7	True	NA	-27	True	NA	NA	NA	49422469	49416797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418166_49418229_49418970_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66693.known	chr3	-	2677	7	FSM	ENSG00000145020.16	ENST00000636725.1	2677	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	176.341209653961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTTGCCAGTCTCTA	8	True	NA	-20	True	ATTAAA	-6	NA	49422454	49416790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66698.known	chr3	-	2448	7	FSM	ENSG00000145020.16	ENST00000638092.1	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	171.797765475056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	8	True	NA	-53	True	NA	NA	NA	49422454	49416823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_66699.known	chr3	-	2468	7	FSM	ENSG00000145020.16	ENST00000637994.1	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_3	55.1344316698336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	2	True	NA	-53	True	NA	NA	NA	49422460	49416823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_6670.nnic	chr1	-	1519	6	NNC	ENSG00000143457.11	novel	973	6	NA	NA	-17	534	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	104.482343005888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTCAGACTCTGCT	-10	True	NA	-12	True	CATAAA	-18	NA	150697125	150647902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150648749_150649130_150649228_150661813_150661929_150663631_150663764_150694655_150694851_150696991
transcript_6671.known	chr1	-	3124	5	FSM	ENSG00000143457.11	ENST00000271732.8	3124	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	14.1155942134931	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCTCTGTGCACAA	-7	True	NA	-18	True	AATAAA	-17	NA	150697154	150646229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
transcript_66714.known	chr3	-	1921	7	FSM	ENSG00000145029.14	ENST00000615713.4	1921	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	12.9486163997034	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGCTGGCTGCCTGTG	4	True	NA	-5	True	AATAAA	-15	NA	49429288	49422946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49423506_49424161_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_66715.known	chr3	-	2040	7	FSM	ENSG00000145029.14	ENST00000423832.5	2040	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	12.9486163997034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGCCTGGTATGCAGT	-16	True	NA	-51	True	NA	NA	NA	49429308	49422992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49423564_49424074_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_66720.known	chr3	-	2768	6	FSM	ENSG00000145020.16	ENST00000635772.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_5	41.8788729552265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	8	True	NA	-51	True	NA	NA	NA	49422454	49416821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49417817_49417974_49418970_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66722.known	chr3	-	1509	6	FSM	ENSG00000145020.16	ENST00000636597.1	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	221.999459458801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTCCTTCTTACTTG	6801	False	NA	-30	True	NA	NA	NA	49422491	49416800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49417719_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_66741.known	chr3	-	1579	1	FSM	ENSG00000145020.16	ENST00000636594.1	1579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	4156	False	NA	-23	True	ATTAAA	-3	NA	49418372	49416793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49416800_49418400
transcript_66745.known	chr3	+	2879	22	FSM	ENSG00000164062.13	ENST00000296456.10	2879	22	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	120.652722161911	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTCTGACAAGAAGTT	-22	True	NA	2	True	CATAAA	-14	NA	49674350	49683971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49674414_49674488_49674622_49675182_49675310_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_66754.nic	chr3	+	2284	21	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_2	277.481999416178	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	-22	True	NA	27	True	AATAAA	-13	NA	49674350	49683503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_49674414_49674488_49674622_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_66761.nic	chr3	+	2152	20	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	284.839567032687	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	-23	True	NA	27	True	AATAAA	-13	NA	49674349	49683503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_49674414_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_66771.known	chr3	-	6108	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	71.6360830522002	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGCAGACAATGGCG	-5	True	NA	-16	True	AATAAA	-23	NA	49723951	49716843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
transcript_66774.known	chr3	-	3144	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	22.868851632734	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCTTCCAGACTCCCC	-5	True	NA	-8	True	AATAAA	-19	NA	49723951	49719915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_66775.known	chr3	-	3217	8	FSM	ENSG00000173540.14	ENST00000308375.10	3217	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	23.1604871120041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGAGACATTCTTCCA	-5	True	NA	-16	True	AATAAA	-11	NA	49723951	49719923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_66778.known	chr3	-	2856	1	FSM	ENSG00000176020.9	ENST00000320431.8	2856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGTCCTCCGTGTGTTC	-4	True	NA	-1	True	AATAAA	-38	NA	49719684	49716828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49716800_49719700
transcript_66779.known	chr3	+	1033	2	FSM	ENSG00000185614.7	ENST00000333323.6	1033	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCTCCATACCCCT	-13	True	NA	NA	False	AATAAA	-17	NA	49803260	49805030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49803444_49804180
transcript_6678.nnic	chr1	+	1871	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_3	14.6590889515307	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGTGTGTGTCTT	NA	False	NA	9	True	NA	NA	NA	150641672	150659642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150658044
transcript_66780.known	chr3	-	2023	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	12.4146062756574	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-16	True	NA	-15	True	AATAAA	-19	NA	49856564	49828600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_66795.known	chr3	-	2905	12	FSM	ENSG00000164076.17	ENST00000488336.5	2905	12	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_6	89.1630505690382	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	9	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_66797.known	chr3	-	2998	11	FSM	ENSG00000164076.17	ENST00000477224.6	2998	11	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_5	86.1940253149834	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	9	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_66798.known	chr3	-	2370	6	FSM	ENSG00000164077.15	ENST00000296473.8	2025	6	-334	-11	28	11	multi-exon	FALSE	canonical	3	51	junction_3	10.6845683113545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCACTTGTCCCTT	NA	False	NA	1	True	ATTAAA	-25	NA	49930145	49908861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929608
transcript_66801.known	chr3	+	4010	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	189.283279768711	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	-2	True	NA	16	True	AATAAA	-16	NA	49940040	50077248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_66803.known	chr3	+	3630	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_6	172.657927706781	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	-6	True	NA	17	True	AATAAA	-17	NA	49940149	50077249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_66812.known	chr3	+	2324	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	202.788584186939	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	3	True	NA	16	True	AATAAA	-16	NA	49940101	50077248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_66823.known	chr3	+	2260	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_2	168.99767703655	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	49940006	50077249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_6684.nnic	chr1	-	1367	4	NIC	ENSG00000143457.11	novel	3124	5	NA	NA	-30	535	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	94.9245314271641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTCTCAGACTCTGCTA	-3	True	NA	-11	True	CATAAA	-19	NA	150697184	150647901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_150648749_150663631_150663764_150694655_150694851_150696991
transcript_66845.known	chr3	+	581	2	FSM	ENSG00000004534.15	ENST00000493652.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGAGCTTGCAGTGAGC	-2	True	NA	NA	False	NA	NA	NA	49940096	49963027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_49940226_49962575
transcript_66848.known	chr3	+	3177	25	FSM	ENSG00000003756.17	ENST00000347869.8	3177	25	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	56.3556261363692	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTGGTGATGAAATCA	-22	True	NA	86	True	NA	NA	NA	50088918	50119021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_66852.nic	chr3	+	3039	24	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_5	64.5359471055401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	-22	True	NA	22	True	AAGAAA	-10	NA	50088918	50118957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_66859.known	chr3	+	2716	5	FSM	ENSG00000003756.17	ENST00000469838.5	2716	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	25.6356685108854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTCCTGTTAAATGAAG	-22	True	NA	NA	False	AAAAAG	-5	NA	50088918	50102194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981
transcript_66863.nic	chr3	+	2308	2	ISM	ENSG00000003756.17	ENST00000492472.1	902	4	-56	1752	0	-1273	intron_retention	TRUE	canonical	3	167	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATAATGGCCAGGG	-22	True	NA	NA	False	AAAAAG	-1	NA	50088918	50092578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_50089030_50090381
transcript_66864.known	chr3	+	5616	25	FSM	ENSG00000003756.17	ENST00000464087.6	5616	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	82.5234709878886	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	22	True	NA	22	True	AAGAAA	-10	NA	50088962	50118957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107017_50107088_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_66865.known	chr3	+	569	5	FSM	ENSG00000003756.17	ENST00000441305.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.0014204430815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGCTTAGTTCCTGA	13	True	NA	NA	False	AAAACA	-5	NA	50088953	50100054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50089058_50090381_50090452_50092042_50092209_50093719_50093876_50099981
transcript_66866.known	chr3	+	2407	9	FSM	ENSG00000114353.17	ENST00000422163.5	2407	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	336.170250765888	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTGCAAAT	0	True	NA	15	True	AGTAAA	-3	NA	50226291	50258898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50227194_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_6687.known	chr1	-	1629	8	FSM	ENSG00000143387.14	ENST00000271651.8	1629	8	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_5	6.19743198956682	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-1	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
transcript_66871.known	chr3	-	1943	12	FSM	ENSG00000214706.12	ENST00000417626.8	1943	12	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	34.2861078293038	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGGTATTTTTCTGTT	-6	True	NA	-2	True	ATTAAA	-29	NA	50292429	50287731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50288272_50288408_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_66877.nic	chr3	-	1920	11	NIC	ENSG00000214706.12	novel	2275	15	NA	NA	109	0	intron_retention	FALSE	canonical	3	656	junction_3	31.3872585613972	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTAACCCCTGGGT	-2	True	NA	-13	True	ATTAAA	-18	NA	50292280	50287742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_66884.known	chr3	-	959	4	FSM	ENSG00000186792.17	ENST00000415204.5	959	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.7648230602334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGCCTACACCTCA	11	True	NA	NA	False	NA	NA	NA	50299401	50292980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50293631_50293722_50294708_50294854_50299212
transcript_66885.known	chr3	-	1696	4	FSM	ENSG00000186792.17	ENST00000621157.5	1696	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	12.657891697365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	4742	False	NA	-5	True	CATAAA	-18	NA	50298831	50292831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50298820
transcript_66886.nnic	chr3	-	1895	4	NNC	ENSG00000186792.17	novel	1878	4	NA	NA	10	0	intron_retention	FALSE	canonical	2	2	junction_3	14.3372087784044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	4182	False	50299412	-5	True	CATAAA	-18	NA	50299391	50292831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_50293516_50293631_50293722_50294708_50295620_50299181
transcript_66887.known	chr3	-	1878	4	FSM	ENSG00000186792.17	ENST00000336307.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	7.87400787401181	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	7	True	NA	-5	True	CATAAA	-18	NA	50299405	50292831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50299212
transcript_66888.known	chr3	-	636	3	FSM	ENSG00000186792.17	ENST00000513170.1	636	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	4341	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50294708_50294854_50299212
transcript_66889.known	chr3	-	1402	3	FSM	ENSG00000186792.17	ENST00000450982.6	1402	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	4341	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50293516_50294708_50295620_50299212
transcript_66891.known	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-4	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50297528_50299212
transcript_66892.known	chr3	-	765	2	FSM	ENSG00000243477.6	ENST00000450489.1	765	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCCGCCTGCACTCC	4456	False	NA	NA	False	NA	NA	NA	50299117	50297204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50297673_50298820
transcript_66893.known	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	7	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50297673_50299212
transcript_66894.known	chr3	-	1820	2	FSM	ENSG00000243477.6	ENST00000443842.1	1820	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGCTCAGAGCCGTC	12	True	NA	-54	True	NA	NA	NA	50299400	50296451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50298084_50299212
transcript_66895.known	chr3	-	1163	2	FSM	ENSG00000243477.6	ENST00000417393.1	1163	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGTGACAGTTTATT	10	True	NA	-6	True	AATAAA	-13	NA	50298859	50296403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50297528_50298820
transcript_66896.known	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-1	True	NA	-3	True	AATAAA	-15	NA	50303574	50299892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
transcript_66897.nic	chr3	-	2152	5	NIC	ENSG00000068001.14	novel	2318	5	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	292.785757850344	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCTTGGATTTTGTA	9290	False	NA	-26	True	ATTAAA	-15	NA	50322810	50317808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_50318540_50318955_50319046_50319568_50320536_50321567_50321774_50322652
transcript_6690.known	chr1	-	4710	22	FSM	ENSG00000143437.21	ENST00000358595.10	4710	22	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_18	48.7404621752936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCAAGTCTGGACCTGG	-11	True	NA	-13	True	ATTAAA	-17	NA	150876599	150809712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_66900.known	chr3	-	1882	4	FSM	ENSG00000068001.14	ENST00000357750.9	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	247.3715154715	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTGGATTTTGTAC	-2	True	NA	-25	True	ATTAAA	-16	NA	50322745	50317807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50322652
transcript_66901.known	chr3	-	1757	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	12.4774797134678	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAATCTTTTATACAT	8280	False	NA	-6	True	AATAAA	-20	NA	50337464	50329781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
transcript_66902.known	chr3	+	790	1	FSM	ENSG00000281358.1	ENST00000629828.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGCTTTTGTCAC	NA	False	NA	NA	False	ATTAAA	-18	NA	50337510	50338300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50337500_50338300
transcript_66905.known	chr3	-	1542	11	FSM	ENSG00000114388.14	ENST00000232501.8	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	23.2036635038521	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCTGATGCGGTGACTC	-13	True	NA	NA	False	AATAAA	-44	NA	50350775	50347329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930_50350023_50350574
transcript_66908.nic	chr3	-	1261	10	NIC	ENSG00000114388.14	novel	1542	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	66.9866395376213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTGAGTGCTGTTTCT	8735	False	NA	-4	True	AATAAA	-20	NA	50350821	50347487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349930_50350023_50350574
transcript_66915.known	chr3	-	1371	11	FSM	ENSG00000114388.14	ENST00000667046.1	1371	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	83.9505211419203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCTGTAAATAAAGACAT	8730	False	NA	-38	True	NA	NA	NA	50350826	50347521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348710_50348783_50348873_50349011_50349385_50349491_50349664_50349834_50349930_50350023_50350574
transcript_66919.known	chr3	+	1225	4	FSM	ENSG00000114395.11	ENST00000232508.9	1225	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.0015014862687	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-21	True	NA	13	True	AGTAAA	-15	NA	50350844	50354069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50350985_50351342_50351561_50352008_50352047_50353240
transcript_66920.known	chr3	+	1142	4	FSM	ENSG00000114395.11	ENST00000425346.6	1142	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.0015014862687	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-4	True	NA	13	True	AGTAAA	-15	NA	50350861	50354069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50350985_50351408_50351561_50352008_50352047_50353240
transcript_66924.nic	chr3	+	1195	3	NIC	ENSG00000114395.11	novel	1225	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-29	True	NA	13	True	AGTAAA	-15	NA	50350836	50354069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_50350985_50351342_50351561_50353240
transcript_66925.nic	chr3	+	1127	3	NIC	ENSG00000114395.11	novel	1142	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-27	True	NA	13	True	AGTAAA	-15	NA	50350838	50354069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_50350985_50351408_50351561_50353240
transcript_66926.known	chr3	+	1004	3	FSM	ENSG00000271858.5	ENST00000607121.5	1004	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	21	True	NA	12	True	AATAAA	-18	NA	50365373	50368197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50365941_50366296_50366332_50367795
transcript_66927.known	chr3	+	590	3	FSM	ENSG00000271858.5	ENST00000606259.5	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCTGCGTGATGCCC	-19	True	NA	NA	False	NA	NA	NA	50365333	50367845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50365839_50366296_50366332_50367795
transcript_66928.known	chr3	+	841	2	FSM	ENSG00000114395.11	ENST00000419046.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGAGCAGCTTGGCAA	7	True	NA	NA	False	NA	NA	NA	50350872	50353393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50351561_50353240
transcript_66929.known	chr3	-	2107	2	FSM	ENSG00000126062.4	ENST00000266025.4	2107	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTCTTGTCAGGC	-11	True	NA	-21	True	AATAAA	-20	NA	50359521	50354749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50355548_50358212
transcript_66930.known	chr3	+	1533	3	FSM	ENSG00000114395.11	ENST00000418577.1	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGGAGAGAAAAAAGT	-8	True	NA	-24	True	NA	NA	NA	50350857	50354032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50351561_50352008_50352047_50353240
transcript_66931.known	chr3	+	910	3	FSM	ENSG00000271858.5	ENST00000606665.5	910	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	32	False	NA	12	True	AATAAA	-18	NA	50365384	50368197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50365858_50366296_50366332_50367795
transcript_66936.known	chr3	+	1499	11	FSM	ENSG00000114735.10	ENST00000455834.5	1499	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	21.6185105869947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTGACCTAATGTTT	-11	True	NA	11	True	AGTAAA	-16	NA	50569492	50580672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50569546_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_66938.nic	chr3	+	1783	11	NIC	ENSG00000114735.10	novel	1499	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	23.017601960239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTGACCTAATGTTT	-29	True	NA	11	True	AGTAAA	-16	NA	50569474	50580672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_50569812_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_6694.known	chr1	-	2427	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_17	49.9530779832434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTCTGTAAACAGAA	127	False	NA	-49	True	AAAAAG	-2	NA	150876609	150811960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_66942.known	chr3	+	16993	11	FSM	ENSG00000114735.10	ENST00000232854.9	16993	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.2702893201424	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGCATTCCCATTTT	18	True	NA	NA	False	AATAAA	-13	NA	50569521	50596166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_66948.known	chr3	+	2500	11	FSM	ENSG00000114738.11	ENST00000357955.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	34.230980120353	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	17	True	NA	35	True	AATAAA	-16	NA	50617169	50649288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50617227_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_66950.known	chr3	+	2537	11	FSM	ENSG00000114738.11	ENST00000621469.5	2537	11	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	64.9181022519913	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCTGGGTTTACT	-2	True	NA	38	True	AATAAA	-19	NA	50617150	50649291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_50617242_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_66954.known	chr3	-	2019	3	FSM	ENSG00000114737.16	ENST00000348721.4	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCCCTCAATGGGGCCG	-3	True	NA	-34	True	AATAAA	-18	NA	50611774	50606488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_50608143_50608372_50608594_50611630
transcript_66955.known	chr3	+	909	4	FSM	ENSG00000145050.19	ENST00000528157.7	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_1	26.106618998935	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCTGCTTTCCAGTT	1	True	NA	70	True	NA	NA	NA	51385290	51389397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51385437_51386207_51386336_51387736_51387879_51388904
transcript_66957.known	chr3	+	1488	6	FSM	ENSG00000164081.13	ENST00000611400.4	1488	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	60.2441698424005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51672209_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66958.known	chr3	+	1448	6	FSM	ENSG00000164081.13	ENST00000457573.5	1448	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	65.2184023110042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51672340_51672393_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66961.known	chr3	+	1320	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	38.1149576937978	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTGTATTTGTTT	16	True	NA	16	True	AATAAA	-28	NA	51671251	51704323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66964.known	chr3	+	1313	5	FSM	ENSG00000164081.13	ENST00000416589.5	1313	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.4369413748722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	60	False	NA	10	True	AATAAA	-22	NA	51671295	51704317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671332_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66965.known	chr3	+	2290	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	52.3563510951632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGAATAAAGCCAATG	19	True	NA	-24	True	NA	NA	NA	51671254	51704283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66966.known	chr3	+	1174	4	FSM	ENSG00000164081.13	ENST00000614067.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	57.9271573232759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51674270_51674563_51699405_51699575_51703723
transcript_66967.known	chr3	+	800	4	FSM	ENSG00000164081.13	ENST00000489026.5	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	62.744632351213	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGCACCCTCCTGC	4964	False	NA	NA	False	NA	NA	NA	51671174	51704018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671289_51684412_51684635_51699405_51699575_51703723
transcript_66968.known	chr3	+	1555	5	FSM	ENSG00000164081.13	ENST00000395057.5	1555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.4369413748722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTGTGTATTTGT	38	False	NA	14	True	AATAAA	-26	NA	51671273	51704321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51671548_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_66970.nnic	chr3	-	1595	15	NNC	ENSG00000114767.7	novel	1542	15	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	116.708078170297	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-5	True	NA	-7	True	ATTAAA	-18	NA	51941941	51933428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941508_51941780
transcript_66972.known	chr3	-	1542	15	FSM	ENSG00000114767.7	ENST00000232888.7	1542	15	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_9	31.2716863527847	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-8	True	NA	-7	True	ATTAAA	-18	NA	51941904	51933428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_66973.known	chr3	+	2337	11	FSM	ENSG00000041880.15	ENST00000398755.8	2337	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	3.55105618091294	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAATGGTACTCTGTTA	-5	True	NA	24	True	CATAAA	-25	NA	51942362	51948867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51942709_51943353_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_66977.known	chr3	+	1422	15	FSM	ENSG00000243989.9	ENST00000636358.2	1422	15	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	25.176114368462	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	37	True	NA	38	True	AATAAA	-38	NA	51983534	51989197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_6698.known	chr1	-	3703	17	FSM	ENSG00000143437.21	ENST00000471844.6	3703	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	114.315626665824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTTGTGTGATCT	6	True	NA	-3	True	NA	NA	NA	150876705	150810093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150812111_150813171_150813339_150814076_150814113_150817927_150818031_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_66980.known	chr3	+	1457	14	FSM	ENSG00000243989.9	ENST00000636880.1	1457	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	89.215847558723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	92	False	NA	38	True	AATAAA	-38	NA	51983434	51989197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_66981.known	chr3	+	1409	14	FSM	ENSG00000243989.9	ENST00000476351.5	1409	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	85.8760631657744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985400_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_66984.known	chr3	+	1319	13	FSM	ENSG00000243989.9	ENST00000476854.5	1319	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	95.443809821975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_6699.known	chr1	+	4370	22	FSM	ENSG00000143379.13	ENST00000368969.8	4370	22	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_21	19.1176095053037	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTCTCTCTCTCAG	20	True	NA	22	True	GATAAA	-13	NA	150926411	150964744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964249
transcript_66990.known	chr3	+	1066	5	FSM	ENSG00000248487.10	ENST00000273596.8	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	10.8857705285386	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGGTTCCGTTTCCTG	-5	True	NA	12	True	AATAAA	-26	NA	51975063	51981196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51975205_51977870_51978083_51978258_51978375_51980392_51980629_51980835
transcript_66992.known	chr3	-	980	5	FSM	ENSG00000114779.20	ENST00000525795.1	980	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.7792189893897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTCTTTCTCTTGCAG	-22	True	NA	NA	False	NA	NA	NA	51974049	51969272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51971811_51971893_51973964
transcript_66993.known	chr3	-	1657	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.8878405775519	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-22	True	NA	-12	True	AATAAA	-15	NA	51974049	51968514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
transcript_66994.known	chr3	-	1818	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.56846672960488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGCAATTAGACCCCA	-4	True	NA	-27	True	NA	NA	NA	51974031	51968529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
transcript_66995.known	chr3	-	1998	3	FSM	ENSG00000114779.20	ENST00000487005.1	1998	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCACCGGCTCCTGCTTC	8732	False	NA	-13	True	AATAAA	-14	NA	51974630	51968515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51969606_51969942_51970185_51973964
transcript_66996.known	chr3	-	1397	3	FSM	ENSG00000114779.20	ENST00000461108.5	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAATGCCCTGAAGGCC	6	True	NA	NA	False	NA	NA	NA	51974021	51969083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51970185_51971459_51971699_51973964
transcript_66998.known	chr3	+	781	2	FSM	ENSG00000243989.9	ENST00000496679.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGGCTGGCAGATTGCT	-3	True	NA	NA	False	NA	NA	NA	51983339	51984577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_51983590_51984046
transcript_66999.known	chr3	-	2156	14	FSM	ENSG00000090097.22	ENST00000461554.6	2156	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	58.8152256582491	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-7	True	NA	-14	True	AATAAA	-16	NA	51967454	51957457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325
transcript_67.known	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1678	junction_4	2400.71232918482	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
transcript_670.known	chr1	+	584	3	FSM	ENSG00000175279.22	ENST00000462462.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	370	False	NA	NA	False	AATAGA	-5	NA	10431122	10442502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10431402_10440346_10440414_10442264
transcript_67000.known	chr3	-	910	4	FSM	ENSG00000162244.12	ENST00000648640.1	910	4	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_3	3677.22760906758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGCCCTGAAGTGCAAG	553	False	NA	73	True	NA	NA	NA	51995857	51993521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995662
transcript_67001.known	chr3	-	713	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	3616.91203468742	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	566	False	NA	-34	True	AATAAA	-12	NA	51995844	51993628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
transcript_67002.known	chr3	-	537	4	FSM	ENSG00000162244.12	ENST00000492277.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3690.89296632792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTCTGCCAACATGAG	596	False	NA	NA	False	NA	NA	NA	51995814	51993749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995764
transcript_67003.known	chr3	-	670	4	FSM	ENSG00000162244.12	ENST00000479017.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	3693.72028658852	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	580	False	NA	-34	True	AATAAA	-12	NA	51995830	51993628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995768
transcript_67004.known	chr3	-	551	4	FSM	ENSG00000162244.12	ENST00000475248.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_3	3656.49404028868	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGTGCGACCCCCCAC	595	False	NA	-128	True	NA	NA	NA	51995815	51993722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995778
transcript_67008.known	chr3	-	719	5	FSM	ENSG00000162244.12	ENST00000480306.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3214.55148504422	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	1	True	NA	-33	True	AATAAA	-13	NA	51995881	51993627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_51994127_51994772_51994858_51995041_51995107_51995424_51995470_51995856
transcript_6701.known	chr1	-	2323	11	FSM	ENSG00000143418.20	ENST00000368954.10	2323	11	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_10	84.0509369370741	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	2	True	NA	-19	True	AATAAA	-19	NA	150974835	150965185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
transcript_67012.known	chr3	-	1936	11	FSM	ENSG00000164087.8	ENST00000296484.7	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	37.6409351637283	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-16	True	NA	8	True	ATTAAA	-43	NA	52154423	52075225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_67013.known	chr3	-	1760	11	FSM	ENSG00000164087.8	ENST00000474012.1	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	70.9707686304721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGTTTTCTCTAAATCT	3	True	NA	NA	False	NA	NA	NA	52154404	52075453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
transcript_67017.nnic	chr3	-	1855	10	NIC	ENSG00000164087.8	novel	1936	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_2	72.3777811892334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	264	False	NA	8	True	ATTAAA	-43	NA	52154441	52075225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_52075986_52096568_52096713_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_67019.known	chr3	-	1999	10	FSM	ENSG00000164087.8	ENST00000394970.6	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	49.7946400011036	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	15	False	NA	-52	True	NA	NA	NA	52154690	52075285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_67024.nnic	chr3	-	1684	9	NIC	ENSG00000164087.8	novel	1999	10	NA	NA	-18	-27	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	78.103196957615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGCAGGAGTGGCTTA	264	False	NA	-19	True	ATTAAA	-16	NA	52154441	52075252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_52075986_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_6703.nnic	chr1	-	2366	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-275	0	intron_retention	FALSE	canonical	3	16	junction_10	199.966622214809	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	1893	False	NA	-19	True	AATAAA	-19	NA	150975278	150965185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975018
transcript_67032.known	chr3	+	2375	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	98.3040484945214	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	-2	True	NA	33	True	AATAAA	-18	NA	52198159	52214327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_67033.known	chr3	+	2430	12	FSM	ENSG00000023330.15	ENST00000394965.6	2430	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	114.469022118621	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	0	True	NA	33	True	AATAAA	-18	NA	52198093	52214327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52198671_52198849_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_67037.known	chr3	+	2125	11	FSM	ENSG00000023330.15	ENST00000469224.5	2125	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	41.1690417668422	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGACCTCAATTATTTCA	3985	False	NA	NA	False	NA	NA	NA	52198085	52214180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_67038.nic	chr3	+	2250	11	NIC	ENSG00000023330.15	novel	2375	12	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_8	129.173526699552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	-10	True	NA	30	True	AATAAA	-15	NA	52198116	52214324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52211282_52211552_52212257_52212421_52214019
transcript_67039.known	chr3	+	2212	11	FSM	ENSG00000023330.15	ENST00000310271.6	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.6262772003521	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	5	True	NA	30	True	AATAAA	-15	NA	52198131	52214324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52198256_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_67045.known	chr3	+	1790	9	FSM	ENSG00000164088.18	ENST00000409502.7	1790	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	10.4133327998293	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTGTGAGTCATGAAT	2	True	NA	25	True	ATTAAA	-15	NA	52246208	52250597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52246315_52246694_52246813_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_67046.known	chr3	-	1558	9	FSM	ENSG00000247596.10	ENST00000678549.1	1558	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	181.162176998953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232097_52235028_52235107_52238991
transcript_67048.known	chr3	-	1579	9	FSM	ENSG00000247596.10	ENST00000676989.1	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	175.608762594581	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232118_52235028_52235107_52238991
transcript_67052.known	chr3	-	1426	8	FSM	ENSG00000247596.10	ENST00000678838.1	1426	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	189.879231220741	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-26	True	NA	-20	True	AATAAA	-16	NA	52239149	52228611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52235028_52235107_52238991
transcript_67055.known	chr3	-	1531	8	FSM	ENSG00000247596.10	ENST00000678352.1	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	34.4164175346355	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-1	True	NA	-20	True	AATAAA	-16	NA	52235190	52228611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028
transcript_67056.nic	chr3	+	1425	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	8.5374989832438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	9984	False	NA	10	True	AATAAA	-18	NA	52287803	52293475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293175_52293306
transcript_67057.nic	chr3	+	1439	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_5	7.56453714527348	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	9984	False	NA	6	True	AATAAA	-14	NA	52287803	52293471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_67062.known	chr3	+	992	6	FSM	ENSG00000168237.18	ENST00000471180.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	5.88557558782486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	7	True	NA	6	True	AATAAA	-14	NA	52287834	52293471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_67065.nic	chr3	+	1624	6	NIC	ENSG00000168237.18	novel	3791	5	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.46726188103779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	3	True	NA	6	True	AATAAA	-14	NA	52290045	52293471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_67066.known	chr3	+	3791	5	FSM	ENSG00000168237.18	ENST00000436784.7	3791	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	7.04893608993584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTCCCTTGCTCTTG	0	True	NA	10	True	CATAAA	-22	NA	52287827	52295257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259
transcript_6707.nnic	chr1	-	2181	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-140	-73	intron_retention	FALSE	canonical	3	16	junction_10	199.966622214809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	2028	False	NA	-92	True	AATAAA	-16	NA	150975143	150965258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974995
transcript_67072.nic	chr3	+	1595	4	ISM	ENSG00000168237.18	ENST00000471180.5	992	6	-9	-4	-2	0	intron_retention	FALSE	canonical	3	17	junction_1	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	-2	True	NA	10	True	AATAAA	-18	NA	52287825	52293475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259
transcript_67073.nnic	chr3	+	1545	4	NNC	ENSG00000168237.18	novel	2019	5	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	10.7806410858642	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	-2	True	NA	10	True	AATAAA	-18	NA	52287825	52293475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_52287877_52290959_52291112_52291796_52291923_52292259
transcript_6708.nnic	chr1	-	2293	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-275	-73	intron_retention	FALSE	canonical	3	16	junction_10	199.966622214809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	1893	False	NA	-92	True	AATAAA	-16	NA	150975278	150965258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975018
transcript_67080.nic	chr3	+	1418	3	NIC	ENSG00000168237.18	novel	2019	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	1	junction_2	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCAGTGCGCCTTCCCT	-2	True	NA	9	True	AATAAA	-17	NA	52287825	52293474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_52287877_52290959_52291112_52292259
transcript_67084.known	chr3	+	2019	5	FSM	ENSG00000168237.18	ENST00000486393.5	2019	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.5758369027902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	-8	True	NA	10	True	AATAAA	-18	NA	52287819	52293475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291744_52291923_52292259
transcript_67085.known	chr3	+	935	5	FSM	ENSG00000168237.18	ENST00000473032.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.0374299499424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTCTCAGTGCGCCT	-8	True	NA	4	True	AATAAA	-12	NA	52287819	52293469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52293045_52293193_52293306
transcript_67087.known	chr3	-	3434	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	81.7602248957279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	618	False	NA	-1	True	AATAAA	-8	NA	52409914	52401025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_67088.known	chr3	-	3600	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_9	50.3636773875776	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-3	True	NA	17	True	AATAAA	-26	NA	52410008	52401007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_6709.nnic	chr1	-	2095	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-488	-73	intron_retention	FALSE	canonical	1	5	junction_10	203.156196065983	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	1680	False	NA	-92	True	AATAAA	-16	NA	150975491	150965258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975429
transcript_67090.known	chr3	-	687	6	FSM	ENSG00000114854.8	ENST00000232975.8	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	6.70522184569608	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTATCTGGCTCTGG	-1	True	NA	-9	True	AATAAA	-15	NA	52454041	52451099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52451307_52451390_52451528_52451743_52451859_52452105_52452253_52452482_52452514_52453991
transcript_67092.known	chr3	-	1877	14	FSM	ENSG00000168268.11	ENST00000422318.7	1877	14	0	0	0	0	multi-exon	FALSE	canonical	3	1886	junction_13	157.696660352686	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-22	True	NA	-23	True	AATAAA	-17	NA	52533857	52524386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
transcript_67095.known	chr3	-	2047	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	586.722135175865	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-4	True	NA	-23	True	AATAAA	-17	NA	52535054	52524386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
transcript_67096.known	chr3	+	314	3	FSM	ENSG00000168273.8	ENST00000491607.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCAGTGCCTTT	3	True	NA	-20	True	AATAAA	-18	NA	52534012	52540526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52534149_52534802_52534878_52540423
transcript_67097.known	chr3	+	1769	2	FSM	ENSG00000168273.8	ENST00000477703.6	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCTGTGGGT	0	True	NA	12	True	AATAAA	-13	NA	52536604	52541890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52536907_52540423
transcript_67098.known	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	-3	True	NA	-21	True	AATAAA	-17	NA	52536601	52540525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52536774_52540423
transcript_67104.known	chr3	+	1933	15	FSM	ENSG00000163938.17	ENST00000418458.6	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	132.31872466873	1934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTTTTATTTACAGAT	11	True	NA	3	True	AATAAA	-24	NA	52686031	52694497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_67111.known	chr3	+	2041	15	FSM	ENSG00000163938.17	ENST00000394799.6	2041	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	338.111290698727	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAGTTTTATTTA	-5	True	NA	-2	True	AATAAA	-19	NA	52686015	52694492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686203_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_6712.nic	chr1	+	1526	9	ISM	ENSG00000143379.13	ENST00000534805.5	2043	13	-40	5463	6	0	5prime_fragment	FALSE	canonical	3	38	junction_1	10.6272056534161	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	-37	True	NA	11	True	AATAAA	-22	NA	150926354	150945320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_67120.known	chr3	+	2118	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	127.693419828336	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	28	False	NA	-35	True	AAAAAG	-29	NA	52686048	52694459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_67138.known	chr3	-	1826	11	FSM	ENSG00000016864.19	ENST00000478968.6	1826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.8814564656201	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-15	True	NA	-5	True	AATAAA	-17	NA	52705791	52694488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705702
transcript_67140.known	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_9	44.0204778385674	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-15	True	NA	-2	True	AATAAA	-20	NA	52705791	52694485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
transcript_67141.known	chr3	-	1577	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	78.701969479804	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTTCAATAGGTAT	-5	True	NA	-19	True	AATAAA	-3	NA	52705781	52694502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
transcript_67143.known	chr3	-	6053	16	FSM	ENSG00000114904.13	ENST00000233027.10	6053	16	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_9	31.0247213256354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTACTCTTCTATGT	-9	True	NA	-1	True	AATAAA	-20	NA	52770940	52708443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52749691_52749830_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
transcript_67144.known	chr3	-	2576	14	FSM	ENSG00000114904.13	ENST00000383721.8	2576	14	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	33.0427372535494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTAAAGTGTATAATT	-8	True	NA	NA	False	TATAAA	-18	NA	52770939	52737497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
transcript_67147.known	chr3	+	597	4	FSM	ENSG00000163938.17	ENST00000462550.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_2	41.6653333119993	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCAAGGCTGGTCTCA	11	True	NA	NA	False	NA	NA	NA	52686031	52687827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501
transcript_67148.known	chr3	+	3786	4	FSM	ENSG00000114902.14	ENST00000619898.5	3786	4	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	72.0940743442591	908	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAGTTTTAATTTG	-22	True	NA	NA	False	AAAACA	-20	NA	52706105	52711148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52706283_52706643_52706704_52706792_52706880_52707686
transcript_6715.known	chr1	+	1478	9	FSM	ENSG00000143379.13	ENST00000368962.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	19.6050854372023	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	-43	True	NA	11	True	AATAAA	-22	NA	150926348	150945320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150926464_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_67152.known	chr3	+	729	7	FSM	ENSG00000163938.17	ENST00000492349.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	447.019263815579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTTTATTAGTGGTAA	11	True	NA	NA	False	GATAAA	-16	NA	52686031	52690704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688207_52689073_52689207_52690591
transcript_67155.known	chr3	-	4744	8	FSM	ENSG00000213533.13	ENST00000355083.11	4744	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	24.0916616958089	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	26	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
transcript_67159.known	chr3	-	4553	21	FSM	ENSG00000163935.14	ENST00000394752.8	4553	21	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_20	17.7242066112986	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACTGATTGTGATTTT	-14	True	NA	-4	True	AATATA	-19	NA	53046073	52903571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53045815
transcript_67161.known	chr3	-	5081	13	FSM	ENSG00000163933.10	ENST00000296292.8	5081	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_3	47.6674679419832	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTTCTTTCATACC	4	True	NA	0	True	AATAAA	-25	NA	53130435	53088482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_67167.nnic	chr3	-	1845	12	NIC	ENSG00000163933.10	novel	5081	13	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_11	83.3256084573847	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-28	True	NA	-27	True	TTTAAA	-13	NA	53130467	53091664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53130337
transcript_67168.known	chr3	-	1800	12	FSM	ENSG00000163933.10	ENST00000394738.7	1800	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	99.435098647184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-14	True	NA	-27	True	TTTAAA	-13	NA	53130453	53091664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53125908_53125995_53130337
transcript_67170.nnic	chr3	-	1885	12	NIC	ENSG00000163933.10	novel	5081	13	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	104.819325074582	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-33	False	NA	-27	True	TTTAAA	-13	NA	53130472	53091664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_67175.known	chr3	-	2831	15	FSM	ENSG00000163931.17	ENST00000423525.6	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	866.172818807434	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCAGGCAATTGCCCCC	18	False	NA	-10	True	AATAAA	-13	NA	53256000	53224713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53225610_53225750_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_67179.known	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	1167.75203546238	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-4	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_67184.known	chr3	-	1941	14	FSM	ENSG00000163931.17	ENST00000450814.6	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	910.750448091147	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-4	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235065_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_67187.known	chr3	-	2996	14	FSM	ENSG00000163931.17	ENST00000462138.6	2996	14	0	0	0	0	multi-exon	FALSE	canonical	3	2955	junction_11	271.584371799846	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCAATTGCCCCCCA	-4	True	NA	-8	True	AATAAA	-15	NA	53256022	53224711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_67199.nic	chr3	-	2059	11	NIC	ENSG00000272886.6	novel	5926	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	69.8186221577023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53347558	53287365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53338090_53338146_53342143_53342272_53344901_53344943_53347382
transcript_672.known	chr1	+	1922	9	FSM	ENSG00000142655.13	ENST00000356607.9	1922	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	12.0409457685017	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	-3	True	NA	21	True	AATAAA	-21	NA	10474949	10630758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_10475003_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_6720.nnic	chr1	+	1838	15	NNC	ENSG00000143412.10	novel	1551	14	NA	NA	-877	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	3.43154632841838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	NA	False	NA	19	True	NA	NA	NA	150981371	150995634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_150981668_150982300_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_67200.known	chr3	-	5926	10	FSM	ENSG00000272886.6	ENST00000610213.6	5926	10	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_7	13.0507083200231	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTTAATTGTGTTTT	-12	True	NA	15	True	AATAAA	-27	NA	53347543	53283428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_67201.nnic	chr3	-	1876	9	NIC	ENSG00000272886.6	novel	5926	10	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_7	57.7146807580186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53347558	53287365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53344901_53344943_53347382
transcript_67202.known	chr3	-	1853	9	FSM	ENSG00000272886.6	ENST00000294241.10	1853	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	55.17189048782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	53347525	53287369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_67210.known	chr3	+	2016	11	FSM	ENSG00000056736.10	ENST00000288167.8	2016	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	7.83836717690617	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACTGGACCAAATGAT	-1	True	NA	NA	False	AATAAA	-14	NA	53846567	53865794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_67211.nnic	chr3	+	1740	11	NNC	ENSG00000056736.10	novel	2016	11	NA	NA	-56	7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	11.4109596441316	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAGTCTTCCATAGACC	NA	False	NA	4	True	AATAAA	-16	NA	53846511	53865595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864878
transcript_67212.known	chr3	+	2822	10	FSM	ENSG00000056736.10	ENST00000475124.1	2822	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.18709405724277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	15	False	NA	-3	True	AATAAA	-9	NA	53846583	53865588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53858819_53860129_53860229_53864745
transcript_67213.known	chr3	+	1048	10	FSM	ENSG00000056736.10	ENST00000494338.1	1048	10	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_5	11.3137084989848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGTGGCAGAAAAA	16	False	NA	NA	False	NA	NA	NA	53846584	53864891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_6722.known	chr1	+	1551	14	FSM	ENSG00000143412.10	ENST00000368947.9	1551	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.52673642656851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	-8	True	NA	19	True	NA	NA	NA	150982291	150995634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_67221.nnic	chr3	+	1563	8	NIC	ENSG00000056736.10	novel	1048	10	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	14.2814279283785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	NA	False	NA	-3	True	AATAAA	-9	NA	53846511	53865588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_53846649_53848663_53848689_53849654_53849796_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_67223.known	chr3	-	3579	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	15.5902391115581	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCCTCAGCCATTAC	-1	True	NA	-18	True	ATTAAA	-1	NA	53882152	53867065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_67230.nic	chr3	-	1720	11	ISM	ENSG00000113812.14	ENST00000335754.8	3579	13	-28	4092	-28	0	5prime_fragment	FALSE	canonical	3	102	junction_2	16.8463645929916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTGTGCAGTATAACA	-1	True	NA	NA	False	AATAAA	-17	NA	53882180	53871157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_67231.nic	chr3	-	1703	10	ISM	ENSG00000113812.14	ENST00000335754.8	3579	13	-28	4996	-28	-904	5prime_fragment	FALSE	canonical	3	102	junction_1	17.6320415405843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAAGATGTGTGGC	-1	True	NA	NA	False	ATTAAA	-19	NA	53882180	53872061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_67234.known	chr3	-	814	6	NNC	ENSG00000113811.12	novel	1497	5	NA	NA	-77	101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	533.348441452677	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTGTCACCTTTTC	NA	False	NA	-28	True	AATAAA	-17	NA	53891962	53885199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_53885562_53885825_53885831_53885833_53885913_53886850_53886935_53888392_53888484_53891769
transcript_67235.known	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	556.006913176446	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	6	True	NA	-35	True	ATTAAA	-13	NA	53891865	53885300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
transcript_67246.nnic	chr3	+	911	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349934	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.5662343819316	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54637743	54879187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54637828_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_67247.nnic	chr3	+	976	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349734	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9350091933121	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54637943	54879187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54638093_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_67248.nnic	chr3	+	861	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345819	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.9758432843435	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	-5	True	NA	11	True	AATAAA	-14	NA	54641858	54879187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_67255.nnic	chr3	+	2961	4	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345819	-118635	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	3.77123616632825	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAAACAAGAAACAGAAT	-5	True	NA	NA	False	AAAAAG	-6	NA	54641858	54766951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217
transcript_6727.known	chr1	-	2623	10	FSM	ENSG00000143409.17	ENST00000683666.2	2542	10	0	-81	0	81	multi-exon	FALSE	canonical	1	4	junction_9	5.29150262212918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCAAAAAGGTGAAACCC	-19	True	NA	70	True	NA	NA	NA	151006902	150996753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002707_151006311
transcript_6728.known	chr1	-	2400	10	FSM	ENSG00000143409.17	ENST00000312210.9	2400	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	5.76922443810985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTCCTGAGATCTGT	1515	False	NA	NA	False	NA	NA	NA	151006857	150996548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002324_151006311
transcript_67288.nnic	chr3	-	1532	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	469	junction_4	3774.13791480916	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54639904	54632121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690_54637950_54639604
transcript_673.nnic	chr1	+	1925	9	NNC	ENSG00000142655.13	novel	805	4	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	33.0596052608013	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	72	False	NA	21	True	AATAAA	-21	NA	10475024	10630758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_10475081_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_6730.known	chr1	+	3025	8	FSM	ENSG00000143363.17	ENST00000271620.8	3025	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	45.1930101151196	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-3	True	NA	13	True	ATTAAA	-16	NA	151008448	151035713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_67300.nnic	chr3	-	1274	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-208	-2	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_3	3894.00327426673	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640065	54632123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637673_54637821_54639604
transcript_67301.nnic	chr3	-	1372	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-177	-2	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_3	3868.34036603554	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640034	54632123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637673_54637950_54639604
transcript_67308.nnic	chr3	-	1200	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-151	-2	at_least_one_novel_splicesite	FALSE	canonical	3	360	junction_4	3442.21825281315	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640008	54632123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637821_54639604
transcript_67309.nnic	chr3	-	1355	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-177	-2	at_least_one_novel_splicesite	FALSE	canonical	3	469	junction_4	3397.41971023599	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640034	54632123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637950_54639604
transcript_6731.nic	chr1	+	2981	8	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_2	61.9664161840418	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	3	True	NA	13	True	ATTAAA	-16	NA	151008402	151035713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_67310.nnic	chr3	-	1240	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_4	3554.69269944675	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54639904	54632123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637965_54639604
transcript_6732.nic	chr1	+	2912	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	68.4657254073566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	3	True	NA	13	True	ATTAAA	-16	NA	151008402	151035713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_67326.nnic	chr3	-	1182	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-177	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4266.93281966098	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640034	54632123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633731_54633741_54634460_54634566_54637690_54637950_54639604
transcript_6734.known	chr1	+	2788	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	57.564456626174	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	31	True	NA	13	True	ATTAAA	-16	NA	151008482	151035713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_6735.known	chr1	+	916	6	FSM	ENSG00000143363.17	ENST00000475722.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	74.3585906267729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGATCCCTTCAGGAC	15	True	NA	NA	False	AAGAAA	-45	NA	151008466	151033966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151027232_151027328_151028785_151028945_151033805
transcript_67356.nnic	chr3	-	1415	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-189	0	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_3	3862.21295229676	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54640046	54632121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54639604
transcript_67359.nnic	chr3	-	1108	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-189	-2	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_3	3713.10893995854	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640046	54632123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54639604
transcript_6736.known	chr1	+	732	6	FSM	ENSG00000143363.17	ENST00000462440.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	83.9418846583754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAAGTACCCACCCTA	-2	True	NA	NA	False	NA	NA	NA	151008449	151033855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151027232_151027328_151028785_151028945_151033805
transcript_6737.nic	chr1	+	2709	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	81.541645801394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	3	True	NA	13	True	ATTAAA	-16	NA	151008402	151035713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_67381.known	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	2161	junction_1	3129.71067175368	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
transcript_67384.nic	chr3	-	1301	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCATCCATT	63	False	56468513	-2	True	AATAAA	-13	NA	56468490	56433788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_56434050_56434350_56435148_56468247
transcript_67386.known	chr3	-	658	2	FSM	ENSG00000187672.14	ENST00000477381.1	658	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCATCCATT	NA	False	NA	-2	True	AATAAA	-13	NA	56434747	56433788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56434050_56434350
transcript_6739.known	chr1	+	845	5	FSM	ENSG00000143363.17	ENST00000431193.5	845	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	95.0960041221502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGATGAGTGCCCTC	30	True	NA	NA	False	NA	NA	NA	151008481	151034113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151033805
transcript_67390.known	chr3	+	3042	18	FSM	ENSG00000180376.17	ENST00000341455.10	3042	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	33.2709335201319	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTAGTAGTAAAAAAAAAA	27	True	NA	7	True	AATAAA	-22	NA	56557218	56621808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_67391.known	chr3	+	3134	18	FSM	ENSG00000180376.17	ENST00000394672.8	3134	18	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_13	28.9687816695609	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTTCTTCTGCTCTGTCA	-17	True	NA	36	True	AGTAAA	-17	NA	56557174	56621837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_67403.known	chr3	-	5600	24	FSM	ENSG00000163946.14	ENST00000493960.6	5600	24	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	14.3926835014979	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGCAAAGGCTTTACT	240	False	NA	NA	False	NA	NA	NA	56683017	56622737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
transcript_67419.known	chr3	+	3027	18	FSM	ENSG00000180376.17	ENST00000326595.11	3027	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	34.1222106481331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTACTTGTTCTATACA	-4	True	NA	-39	True	ATTAAA	-24	NA	56557187	56621762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_56557235_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_6742.known	chr1	+	2238	4	FSM	ENSG00000143363.17	ENST00000368935.1	2238	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	97.8570385818005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	4	True	NA	13	True	ATTAAA	-16	NA	151008529	151035713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151008672_151017811_151017905_151027232_151027328_151033805
transcript_67420.known	chr3	-	3639	13	FSM	ENSG00000163947.12	ENST00000338458.8	3639	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	9.80929264637477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTGTACAGTGTTTG	-4	True	NA	-1	True	AATAAA	-19	NA	57079308	56727417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56882291_56882355_56958822_56958890_57035087_57035177_57079225
transcript_67422.known	chr3	-	3582	10	FSM	ENSG00000163947.12	ENST00000296315.8	3582	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	10.7059461959519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATGTGTACAGTGTT	-1	True	NA	-3	True	AATAAA	-17	NA	56801949	56727419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_67423.known	chr3	-	2024	9	FSM	ENSG00000163947.12	ENST00000495373.5	2024	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	9.81628111863143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAATAGGAAGGGAT	-1	True	NA	0	True	GATAAA	-43	NA	56801949	56731592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_67425.known	chr3	+	2190	2	FSM	ENSG00000186451.2	ENST00000334325.2	2190	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGCTAAGACATGTGT	-1	True	NA	NA	False	AATAAA	-15	NA	57060663	57075432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57060787_57073365
transcript_67429.known	chr3	-	757	3	FSM	ENSG00000163666.10	ENST00000473921.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCATGACTAAGTGAT	41	False	NA	56	True	AATAAA	-19	NA	57199938	57197915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57198296_57198752_57198953_57199761
transcript_67430.known	chr3	+	6069	22	FSM	ENSG00000157500.12	ENST00000288266.8	6069	22	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	25.3206197958911	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATACTCTGAACTTT	-27	True	NA	31	True	AATAAA	-35	NA	57227728	57273471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540
transcript_67433.nic	chr3	+	539	7	ISM	ENSG00000157500.12	ENST00000482800.5	2217	20	8	25129	8	0	5prime_fragment	FALSE	canonical	3	246	junction_3	21.1476292340825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	41	False	NA	11	True	AATAGA	-15	NA	57227796	57242892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_67435.nnic	chr3	-	1163	5	NNC	ENSG00000174844.15	novel	746	5	NA	NA	2587	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.58602010819715	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGGTGTTATTCTTT	NA	False	NA	NA	False	TATAAA	-6	NA	57306658	57293699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_57293972_57295524_57295593_57296343_57296436_57296846_57296985_57306065
transcript_67436.known	chr3	+	8780	3	FSM	ENSG00000174840.9	ENST00000311180.9	8780	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGCCTTTTCAGGACC	-17	True	NA	NA	False	AATAAA	-19	NA	57556273	57566848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57557688_57559309_57559389_57559561
transcript_67442.known	chr3	-	1596	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	0	0	0	multi-exon	TRUE	canonical	3	1658	junction_2	108.899954086308	2260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	0	True	NA	NA	False	AATAAA	-17	NA	57597344	57571362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
transcript_67445.known	chr3	-	1601	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	737.575216503375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTGGAATTATTCCT	10	True	NA	NA	False	AATACA	-12	NA	57597366	57571404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
transcript_67447.known	chr3	-	1467	5	FSM	ENSG00000168374.11	ENST00000496292.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	809.118501827761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCCTAATAAAATGATAA	134	False	NA	NA	False	AATACA	-25	NA	57597325	57571391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57597073
transcript_6745.known	chr1	+	2247	10	FSM	ENSG00000163141.20	ENST00000368931.8	2247	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.58676593929396	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCCCCTTCCCCGCGG	-22	True	NA	NA	False	NA	NA	NA	151036585	151047720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151036767_151037566_151037663_151038503_151038569_151038795_151039027_151042955_151043139_151043331_151043435_151043595_151043728_151045796_151045884_151046066_151046166_151046650
transcript_67450.known	chr3	-	1360	4	FSM	ENSG00000168374.11	ENST00000489843.1	1360	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	845.229883259907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAATTATTCCTAATAAAA	125	False	NA	NA	False	AATACA	-19	NA	57597334	57571397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57597073
transcript_67451.known	chr3	+	552	3	FSM	ENSG00000272146.6	ENST00000607782.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTCTTATTTTTAAAAA	477	False	NA	NA	False	AATAAA	-44	NA	57597795	57600927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_57598052_57600058_57600170_57600742
transcript_67454.known	chr3	+	2527	11	FSM	ENSG00000136068.16	ENST00000682987.1	2527	11	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_7	22.3179300115401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAATAGCAATAAGCAAA	0	True	NA	NA	False	NA	NA	NA	58008421	58105853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079
transcript_67455.known	chr3	+	6497	19	FSM	ENSG00000136068.16	ENST00000481470.5	6497	19	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_4	125.149157921238	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTGTTCTTGGA	8795	False	NA	21	True	AATAAA	-17	NA	58132077	58172251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58132932_58134615_58134773_58135978_58136169_58138281_58138530_58142649_58142753_58143472_58143614_58145920_58146050_58146819_58146994_58148205_58148365_58148648_58148853_58149849_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58169794_58170574
transcript_67456.known	chr3	+	2198	10	FSM	ENSG00000163686.15	ENST00000478253.6	2198	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	13.7634333930685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	-18	True	NA	12	True	AATAAA	-23	NA	58237791	58294734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58237917_58249877_58249943_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_67457.known	chr3	+	2393	9	FSM	ENSG00000163686.15	ENST00000295962.8	2393	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	9.82900681656087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	3	True	NA	12	True	AATAAA	-23	NA	58237531	58294734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58237917_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_67464.known	chr3	+	3266	6	FSM	ENSG00000163684.12	ENST00000295959.10	3266	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	68.8981857526016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	-30	True	NA	8	True	NA	NA	NA	58306244	58320193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67467.known	chr3	+	805	6	FSM	ENSG00000163684.12	ENST00000466547.1	805	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	105.397153661757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCAGAATTAACAGGGGA	35	True	NA	NA	False	NA	NA	NA	58306309	58317778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58310289_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_6747.known	chr1	-	1174	6	FSM	ENSG00000197622.13	ENST00000492796.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	24.7353997339845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAAGCTGGCTTT	-14	True	NA	NA	False	NA	NA	NA	151059615	151052945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
transcript_67470.known	chr3	+	7985	6	FSM	ENSG00000163684.12	ENST00000445193.7	7985	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	85.8449765565813	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGGAAACACTGAGTT	-13	True	NA	NA	False	AATAAA	-26	NA	58306261	58324695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306652_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67476.known	chr3	+	1378	5	FSM	ENSG00000255154.9	ENST00000481972.5	1378	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	77.7978148793396	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGAAACCCCATCTCT	39	False	NA	NA	False	NA	NA	NA	58306313	58318472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67480.known	chr3	+	3127	5	FSM	ENSG00000255154.9	ENST00000461393.7	3127	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	101.512006679013	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	-14	True	NA	8	True	NA	NA	NA	58306519	58320193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306652_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_67484.known	chr3	+	1531	6	FSM	ENSG00000255154.9	ENST00000477305.5	1531	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	122.414704999032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATCTCTACCAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	58306271	58318484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58306418_58310506_58310592_58315721_58315804_58316497_58316592_58316914_58316994_58317439
transcript_67486.known	chr3	+	3001	18	FSM	ENSG00000168297.16	ENST00000356151.7	3001	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_16	14.5095124507026	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTCTTATTCTTTTG	-26	True	NA	119	True	AATAGA	-32	NA	58332891	58426127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
transcript_67488.known	chr3	+	1974	17	FSM	ENSG00000168297.16	ENST00000302779.9	1974	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	20.4640500329236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCTTAAGATCTTGCT	-38	True	NA	-2	True	AATAAA	-14	NA	58332879	58425151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58424751
transcript_67489.nic	chr3	+	1474	15	ISM	ENSG00000168297.16	ENST00000484288.5	2031	18	-21	11362	0	-4929	5prime_fragment	FALSE	canonical	3	65	junction_14	11.9772318017417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGATTTTAGCTCGAAAG	-28	True	NA	NA	False	AAGAAA	-6	NA	58332889	58409598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531
transcript_67491.known	chr3	+	1653	15	FSM	ENSG00000168297.16	ENST00000468776.5	1653	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.2146749679158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGCCACAAACAGTACT	-33	True	NA	-95	True	NA	NA	NA	58332884	58425058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58333091_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
transcript_67494.known	chr3	-	1478	9	FSM	ENSG00000168291.13	ENST00000383714.8	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	903.506286295231	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	NA	False	NA	-2	True	AATAAA	-17	NA	58433857	58427629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433767
transcript_67498.known	chr3	-	1507	10	FSM	ENSG00000168291.13	ENST00000302746.11	1507	10	0	0	0	0	multi-exon	FALSE	canonical	3	2576	junction_3	127.357763799464	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	1	True	NA	-2	True	AATAAA	-17	NA	58433832	58427629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_67499.known	chr3	-	1616	10	FSM	ENSG00000168291.13	ENST00000469364.5	1616	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	871.120351424915	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAATTTCTAACATG	13	True	NA	7	True	ATTAAA	-42	NA	58433820	58427650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429942_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_675.nnic	chr1	+	1793	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	34.9068731902238	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	-3	True	NA	21	True	AATAAA	-21	NA	10474949	10630758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_67500.known	chr3	-	1535	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	2576	junction_3	120.525930819886	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATAATATACATTTACT	-6	True	NA	-34	True	ATTAAA	-1	NA	58433839	58427691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
transcript_67502.known	chr3	+	1555	3	FSM	ENSG00000168301.13	ENST00000404589.8	1555	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	19	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTGTATTTATTGAT	-18	True	NA	14	True	AATAAA	-17	NA	58492095	58502356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58492170_58498712_58498783_58500945
transcript_67503.nic	chr3	+	1509	3	NIC	ENSG00000168301.13	novel	1555	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	58.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTGTATTTATTGAT	0	True	NA	14	True	AATAAA	-17	NA	58492113	58502356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_58492170_58498712_58498783_58500973
transcript_67504.known	chr3	+	1759	4	FSM	ENSG00000168301.13	ENST00000490264.1	1759	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	70.6179077068196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACTAATAAAAAATGAA	5	True	NA	-15	True	NA	NA	NA	58492118	58502327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_58492170_58494152_58494409_58498712_58498783_58500945
transcript_67505.known	chr3	-	2297	15	FSM	ENSG00000168306.13	ENST00000302819.10	2297	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	10.7069022178238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	4	True	NA	-2	True	ATTAAA	-14	NA	58537190	58505135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465_58526657_58528793_58528957_58530465_58530639_58531250_58531367_58531692_58531813_58533444_58533553_58533993_58534146_58534359_58534523_58534946_58535198_58537118
transcript_67506.known	chr3	-	1072	6	FSM	ENSG00000168306.13	ENST00000467738.1	1072	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	2.28035085019828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	49	False	NA	-2	True	ATTAAA	-14	NA	58526749	58505135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465
transcript_67508.known	chr3	-	1432	4	FSM	ENSG00000168309.18	ENST00000447756.2	1432	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGCTTCTAACTCAAT	NA	False	NA	NA	False	CATAAA	-20	NA	58587113	58565851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58566696_58567207_58567365_58569690_58569866_58586857
transcript_6751.known	chr1	-	3006	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	7.66077672302228	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCACAGTAATCATTG	-21	True	NA	-16	True	AATAAA	-14	NA	151059622	151050984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
transcript_67520.known	chr3	-	2761	15	FSM	ENSG00000163689.21	ENST00000468415.6	2761	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.1900311429297	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGATGCCACTGTTTT	-28	True	NA	NA	False	AATAAA	-33	NA	59050032	58753699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_58753864_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870161_58870310_58884544_58884710_58913697_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_67523.known	chr3	-	652	1	FSM	ENSG00000226360.5	ENST00000472730.1	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACATTTGAATAAATTCT	27	False	NA	NA	False	NA	NA	NA	61743106	61742454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_61742500_61743100
transcript_67525.known	chr3	-	2758	6	FSM	ENSG00000241472.7	ENST00000664758.1	2758	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.6225669551756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACATTAAACATAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	62318960	62261845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_62264143_62292613_62292718_62294699_62294779_62317105_62317193_62317807_62317904_62318865
transcript_67526.known	chr3	-	2682	6	FSM	ENSG00000241472.7	ENST00000652980.1	2682	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1923060660269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTACATTAAACATAAT	1	True	NA	NA	False	NA	NA	NA	62318892	62261850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_62264143_62292613_62292718_62294699_62294779_62317105_62317193_62317807_62317901_62318865
transcript_67527.known	chr3	-	2661	5	FSM	ENSG00000241472.7	ENST00000474795.5	2661	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.783020910792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGTTGTCTTTTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	62318947	62261822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_62264143_62294699_62294779_62317105_62317193_62317807_62317901_62318865
transcript_67528.known	chr3	-	2849	5	FSM	ENSG00000241472.7	ENST00000668824.1	2849	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.2766694099455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCAGCTGTCCATTTA	-4	True	NA	NA	False	NA	NA	NA	62318940	62261630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_62264143_62294699_62294779_62317105_62317193_62317807_62317904_62318865
transcript_67529.nnic	chr3	-	328	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.6774165590278	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-1	True	NA	NA	False	AATAAA	-16	NA	62318937	62315808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_62315885_62317105_62317193_62317807_62317901_62318865
transcript_67530.nnic	chr3	-	328	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	21.7460085737335	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	2	True	NA	NA	False	AATAAA	-16	NA	62318934	62315808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_62315885_62317105_62317193_62317807_62317904_62318865
transcript_67532.known	chr3	+	3369	6	FSM	ENSG00000114405.11	ENST00000462069.6	3369	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	38.2287849663052	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	14	True	NA	NA	False	ATTAAA	-16	NA	62319021	62336213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_67533.known	chr3	+	582	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	102.541455031611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTACACTTGGGGAGG	7	True	NA	NA	False	AATAAA	-40	NA	62319014	62324133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
transcript_67534.known	chr3	+	768	5	FSM	ENSG00000114405.11	ENST00000542214.2	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_3	9.36416040016402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	10	False	NA	12	True	ATTAAA	-24	NA	62319720	62333646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_67535.known	chr3	-	4371	3	FSM	ENSG00000163618.18	ENST00000474560.1	4371	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATACGTTTGGGTCTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	62441135	62398351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_62399586_62403080_62403186_62438103
transcript_67537.nnic	chr3	+	2290	11	NNC	ENSG00000244342.5	novel	1957	9	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	26.8776859122954	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	-2	True	NA	15	True	AATAAA	-17	NA	62950383	63125062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_62989133_62989266_63102691_63102830_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
transcript_67545.nnic	chr3	+	2258	10	NNC	ENSG00000244342.5	novel	1957	9	NA	NA	-146	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	26.5292756994194	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	NA	False	NA	15	True	AATAAA	-17	NA	62950283	63125062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63102691_63102830_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
transcript_67552.nnic	chr3	+	2020	9	NIC	ENSG00000244342.5	novel	1957	9	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_7	20.2422824799972	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	-2	True	NA	15	True	AATAAA	-17	NA	62950383	63125062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
transcript_6757.known	chr1	-	2379	4	FSM	ENSG00000197622.13	ENST00000483763.5	2379	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8.65383665716478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGATATTTTTCTC	27	True	NA	NA	False	NA	NA	NA	151059574	151052113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151053328_151054230_151054322_151055015_151055994_151059478
transcript_67570.nnic	chr3	+	986	7	NNC	ENSG00000244342.5	novel	758	7	NA	NA	-146	23738	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	27.8667464113692	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTTTGGACATTCATT	NA	False	NA	4	True	AATAAA	-41	NA	62950283	63148800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63144744_63144988_63146623_63146730_63148679
transcript_67576.nnic	chr3	+	1533	6	NIC	ENSG00000244342.5	novel	758	7	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	30.7441051260238	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	NA	False	NA	15	True	AATAAA	-17	NA	62950372	63125062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63123322_63123449_63124082
transcript_67586.nnic	chr3	-	319	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95608	-43039	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	9	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTAGTATTTTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	63645659	63466634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_63466735_63549977_63550052_63645514
transcript_67590.known	chr3	-	892	8	FSM	ENSG00000163634.12	ENST00000295899.10	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_7	99.6155876664011	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGTGCTCATTAATA	30	True	NA	-16	True	AATAAA	-17	NA	63863805	63833869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863771
transcript_67593.known	chr3	-	836	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	238.782792977681	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTGTGCTCATTAAT	611	False	63863900	-17	True	AATAAA	-16	NA	63863868	63833870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
transcript_67594.known	chr3	-	1495	9	FSM	ENSG00000163636.11	ENST00000492933.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	519.221532681379	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-5	True	NA	-20	True	AATAAA	-18	NA	64023472	64010554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64022642_64022802_64023274
transcript_67598.known	chr3	-	1362	8	FSM	ENSG00000163636.11	ENST00000295901.9	1362	8	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_7	132.54048284142	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-27	True	NA	-16	True	AATAAA	-22	NA	64023494	64010550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023274
transcript_67599.known	chr3	-	1176	8	FSM	ENSG00000163636.11	ENST00000482510.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	433.249327283767	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATAAATACTGCAT	9	True	NA	-49	True	NA	NA	NA	64023458	64010583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023391
transcript_67602.known	chr3	-	2052	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_1	51.2466801092736	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	30	True	NA	-20	True	AATAAA	-18	NA	64023437	64010554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
transcript_67604.nic	chr3	-	1683	5	ISM	ENSG00000151276.24	ENST00000460329.6	3694	22	-323	91717	-323	0	5prime_fragment	TRUE	canonical	0	0	junction_4	73.0530629063559	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	-2	True	NA	NA	False	AATGAA	-13	NA	65598209	65452581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
transcript_67609.known	chr3	+	2035	10	FSM	ENSG00000144741.19	ENST00000354883.11	2035	10	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	38.0292285252044	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTCCCTCTTTCACA	-1	True	NA	NA	False	AATAAA	-18	NA	66221000	66378923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_67617.nnic	chr3	+	1159	9	NIC	ENSG00000144741.19	novel	2035	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	89.3846148674368	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	-14	True	NA	27	True	AATAAA	-18	NA	66220987	66378079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_6762.known	chr1	+	2085	2	FSM	ENSG00000143443.10	ENST00000368926.6	2085	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCAGTCACTGTTCTG	19	True	NA	NA	False	AATACA	-38	NA	151047750	151051420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151048853_151050437
transcript_67620.known	chr3	+	1023	9	FSM	ENSG00000144741.19	ENST00000336733.10	1023	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	72.1577048900532	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	10	True	NA	27	True	AATAAA	-18	NA	66221011	66378079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_67630.known	chr3	+	4680	4	FSM	ENSG00000163376.11	ENST00000417314.2	4680	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	9.17726659862414	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGTGTTGCAAAGTGA	-10	True	NA	18	True	AATAAA	-19	NA	66998306	67011210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_66998372_66998980_66999192_67003194_67004310_67007921
transcript_67635.known	chr3	-	2350	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_4	39.81155611126	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGTATCTCTCAT	-10	True	NA	-1	True	AATAAA	-22	NA	67654612	67374718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
transcript_6764.known	chr1	+	8807	9	FSM	ENSG00000143458.12	ENST00000368918.8	8807	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.04633819296811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCAGGGTGTCATTGA	0	True	NA	20	True	AATAAA	-30	NA	151070760	151125542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151070935_151088189_151088298_151090405_151090574_151093191_151093387_151097851_151098003_151103561_151103676_151107036_151107223_151117391_151117517_151117956
transcript_67640.nic	chr3	-	1069	2	ISM	ENSG00000172340.15	ENST00000492795.1	1512	10	-44	200071	-39	-200071	5prime_fragment	FALSE	canonical	3	609	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGAACAACAAACAACTT	NA	False	NA	NA	False	NA	NA	NA	67654651	67608676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_67609597_67654502
transcript_67641.known	chr3	+	3894	6	FSM	ENSG00000241316.8	ENST00000656446.1	3894	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.0976176963403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGATACATCATGTTTG	214	False	NA	NA	False	CATAAA	-37	NA	67654966	67753596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_67655103_67669815_67669910_67670828_67671005_67746770_67746958_67749852_67749971_67750413
transcript_67642.known	chr3	+	2336	4	FSM	ENSG00000241316.8	ENST00000464420.6	2336	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGGAAATAAATAAATG	NA	False	NA	NA	False	AGTAAA	-40	NA	67654676	67748463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770
transcript_67645.known	chr3	+	2558	4	FSM	ENSG00000241316.8	ENST00000659205.1	2558	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTTGGAATATATAAAGA	-21	True	NA	NA	False	ATTAAA	-41	NA	67654731	67752295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_67655103_67746770_67746958_67749852_67749971_67750413
transcript_67647.known	chr3	-	2229	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.3231850475024	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-3	True	NA	-3	True	AGTAAA	-23	NA	68932547	68731765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_67648.nic	chr3	-	2176	6	NIC	ENSG00000163377.16	novel	2229	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.4585222742362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	NA	False	NA	-3	True	AGTAAA	-23	NA	68932576	68731765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932321
transcript_67649.nnic	chr3	-	2139	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6567267634746	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	NA	False	NA	-3	True	AGTAAA	-23	NA	68932580	68731765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932362
transcript_6765.known	chr1	+	1680	7	FSM	ENSG00000143458.12	ENST00000368916.1	1680	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.89296944860009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTATCTGTTGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151088157	151118671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151088298_151090405_151090574_151093191_151093387_151097851_151098003_151107036_151107223_151117391_151117517_151117956
transcript_67650.nnic	chr3	-	2218	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	10.5375518978556	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	NA	False	NA	-3	True	AGTAAA	-23	NA	68932577	68731765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_68733154_68739115_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_67661.known	chr3	-	2111	18	FSM	ENSG00000144744.17	ENST00000361055.9	2111	18	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_17	77.6893824046008	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	5	True	NA	-26	True	AATAAA	-16	NA	69080365	69054729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
transcript_67665.known	chr3	-	4867	17	FSM	ENSG00000144747.17	ENST00000646708.1	4867	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	18.8973377754646	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTGGCGTGGTGGTGT	-7	True	NA	NA	False	AATACA	-5	NA	69052333	69021847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047348_69048563_69051944
transcript_67670.known	chr3	-	2112	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_16	191.921034787097	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	NA	False	NA	-26	True	AATAAA	-16	NA	69080408	69054729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
transcript_67678.known	chr3	-	2004	16	FSM	ENSG00000144744.17	ENST00000415609.6	2004	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	277.940441261953	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-11	True	NA	-26	True	AATAAA	-16	NA	69080381	69054729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69077797_69077919_69080333
transcript_67693.known	chr3	-	622	4	FSM	ENSG00000144744.17	ENST00000466763.5	622	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	110.276420366681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTATTATTTCTTTT	5	True	NA	NA	False	AGTAAA	-40	NA	69080365	69075083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69075511_69077797_69077919_69080111_69080154_69080333
transcript_67694.known	chr3	-	652	3	FSM	ENSG00000144744.17	ENST00000485424.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_2	71	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGTGTTCACTTATAT	7	True	NA	NA	False	AATAGA	-35	NA	69080363	69077338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_69077919_69080111_69080154_69080333
transcript_67701.known	chr3	+	2134	3	FSM	ENSG00000144746.7	ENST00000273258.4	2134	3	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_2	19	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTCTTAAATACCTGA	-3	True	NA	30	True	AATAAA	-41	NA	69084936	69106092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_69085224_69101838_69102057_69104463
transcript_67708.nic	chr3	-	766	3	ISM	ENSG00000114861.24	ENST00000649431.2	1596	12	14	220022	-6	32	5prime_fragment	FALSE	canonical	0	0	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACGAAAAACAGGCTTA	-4	True	NA	NA	False	AATAAA	-3	NA	71306039	71197849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_71198393_71299819_71299881_71305877
transcript_67709.known	chr3	-	560	3	FSM	ENSG00000114861.24	ENST00000470112.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAGAGTCATAAATAAC	20	True	NA	NA	False	AATGAA	-28	NA	71306015	71296084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_71296446_71299819_71299881_71305877
transcript_6771.known	chr1	+	1913	7	FSM	ENSG00000163156.12	ENST00000368905.9	1913	7	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	59.4885609919158	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTATCTCTGGCATC	37	True	NA	NA	False	AATAAA	-21	NA	151166143	151170296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_67711.known	chr3	-	1460	5	FSM	ENSG00000241163.9	ENST00000470712.2	1460	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATCACCTGTTTCTTT	990	False	NA	NA	False	AATAAA	-21	NA	72101074	72059437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_72060110_72060509_72060612_72060802_72061095_72099903_72100011_72100787
transcript_67713.known	chr3	-	2057	3	FSM	ENSG00000241163.9	ENST00000668763.1	2057	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTGCAATTTTGCC	1107	False	NA	NA	False	ATTAAA	-25	NA	72100957	72097231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_72099012_72099903_72100011_72100787
transcript_67714.known	chr3	-	2846	11	FSM	ENSG00000144736.14	ENST00000325599.13	2846	11	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_10	19.6888293202008	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGTGGACGTATGC	-9	True	NA	-12	True	AATAAA	-25	NA	72848445	72749276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_67719.known	chr3	-	2844	11	FSM	ENSG00000144736.14	ENST00000444040.6	2844	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.4119836740782	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCATGTGGACGTAT	21	True	NA	-14	True	AATAAA	-23	NA	72848415	72749278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844454_72848197
transcript_6772.nnic	chr1	+	859	7	NNC	ENSG00000163156.12	novel	869	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	201.490832435512	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	9315	False	NA	15	True	AATAAA	-25	NA	151165989	151169138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168193_151168339_151168985
transcript_67727.known	chr3	+	4957	9	FSM	ENSG00000163605.15	ENST00000356692.10	4957	9	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	65.4072578159335	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTGTGTAATTATT	-22	True	NA	25	True	AATAAA	-16	NA	72996810	73069198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
transcript_67733.nic	chr3	+	1482	8	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-29	3759	-21	149	intron_retention	FALSE	canonical	3	797	junction_7	67.9201211508258	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAAAAAGAATCTGATG	NA	False	NA	77	True	AAGAAA	-4	NA	72996781	73065439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851
transcript_67739.nic	chr3	+	1056	8	NIC	ENSG00000163605.15	novel	4957	9	NA	NA	-21	149	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	325.362842979706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAAAAAGAATCTGATG	NA	False	NA	77	True	AAGAAA	-4	NA	72996781	73065439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_72997072_72998076_72998159_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
transcript_67742.nic	chr3	+	876	7	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-29	5070	-21	-838	5prime_fragment	FALSE	canonical	3	902	junction_2	33.5095342982992	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAGAAAAATCACAGGT	NA	False	NA	10	True	NA	NA	NA	72996781	73064128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002
transcript_67744.known	chr3	+	877	7	FSM	ENSG00000163605.15	ENST00000488810.5	877	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	348.75369372795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGGTGAAGTCAGAGA	6	True	NA	NA	False	AAAAAG	-14	NA	72996838	73064966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73064002_73064147_73064851
transcript_67748.known	chr3	+	1033	5	FSM	ENSG00000163605.15	ENST00000470976.1	1033	5	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_2	34.8173807171074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATATAGCAAAGTAAGAAT	-15	True	NA	NA	False	NA	NA	NA	72996817	73061454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022
transcript_6775.known	chr1	+	869	7	FSM	ENSG00000163156.12	ENST00000368902.1	869	7	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_1	175.517963626392	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	-28	True	NA	15	True	AATAAA	-25	NA	151166078	151169138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151166253_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_67755.known	chr3	+	1679	1	FSM	ENSG00000255423.1	ENST00000533473.1	1679	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCAGGTGTGGTGGCT	82	False	NA	NA	False	TTTAAA	-17	NA	73061658	73063337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_73061700_73063300
transcript_67756.known	chr3	-	2238	7	FSM	ENSG00000244026.7	ENST00000484945.6	2406	7	168	0	12	0	multi-exon	FALSE	canonical	3	7	junction_3	92.7930792438507	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTAATCTACAGATGAT	108	False	NA	-42	True	AATAAA	-23	NA	75434957	75421559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426600_75427426_75427693_75427774_75427909_75430831_75430915_75432807_75432871_75434917
transcript_67757.nnic	chr3	-	2096	6	FSM	ENSG00000244026.7	ENST00000689507.1	2116	6	6	14	0	0	multi-exon	FALSE	canonical	3	16	junction_2	83.7338641172137	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	-48	True	AATAAA	-17	NA	75435119	75421565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426600_75429135_75429238_75430831_75430915_75432807_75432871_75434917
transcript_67758.known	chr3	-	1068	5	FSM	ENSG00000244026.7	ENST00000478666.6	2014	5	79	867	2	299	multi-exon	FALSE	canonical	3	132	junction_2	36.8739406627499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTACTGCAGAGGTCAC	19	False	NA	NA	False	NA	NA	NA	75435046	75422418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_67759.nic	chr3	-	1935	5	FSM	ENSG00000244026.7	ENST00000686855.1	2026	5	87	4	10	0	multi-exon	FALSE	canonical	3	25	junction_2	75.9391203530828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	27	False	NA	-48	True	AATAAA	-17	NA	75435038	75421565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434917
transcript_67763.known	chr3	+	532	4	FSM	ENSG00000272690.6	ENST00000659018.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8.04155872120988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAGGATGAGTTATCT	NA	False	NA	5	True	AATAAA	-16	NA	75435333	75452651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75435414_75443507_75443647_75451209_75451403_75452531
transcript_67764.nnic	chr3	+	544	3	NNC	ENSG00000272690.6	novel	1126	8	NA	NA	0	-14290	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGAGATTTGGAGTGA	NA	False	NA	4	True	AATAAA	-16	NA	75435307	75523652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_75435414_75443507_75443647_75523353
transcript_67767.known	chr3	-	201	2	FSM	ENSG00000272710.2	ENST00000608389.1	201	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTTCCTGGCTGCA	NA	False	NA	0	True	TATAAA	-22	NA	75579999	75540048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75540228_75579977
transcript_67768.known	chr3	-	1138	3	FSM	ENSG00000243422.3	ENST00000638439.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCCGGAGTTAAGAATAT	-1	True	NA	NA	False	TATAAA	-15	NA	75670156	75624274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75625154_75630079_75630202_75670019
transcript_67769.known	chr3	-	1169	6	FSM	ENSG00000227124.11	ENST00000477374.5	1169	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-1	True	NA	NA	False	AATAAA	-30	NA	75785553	75729960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_67770.known	chr3	+	1344	6	FSM	ENSG00000242516.3	ENST00000463183.2	1344	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.56417109729742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	102	False	NA	30	True	AATAAA	-34	NA	75672390	75679314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75675967_75676129_75678832
transcript_67771.known	chr3	+	880	5	FSM	ENSG00000242516.3	ENST00000662338.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.75925291729789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	406	False	NA	30	True	AATAAA	-34	NA	75672694	75679314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967_75676129_75678832
transcript_67772.known	chr3	+	716	4	FSM	ENSG00000242516.3	ENST00000665741.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.93310961716756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	395	False	NA	16	True	AATAAA	-20	NA	75672683	75679300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75678832
transcript_67774.known	chr3	+	671	3	FSM	ENSG00000242516.3	ENST00000656252.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	395	False	NA	16	True	AATAAA	-20	NA	75672683	75679300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_75672770_75675763_75675881_75678832
transcript_67777.known	chr3	-	2941	16	FSM	ENSG00000114480.13	ENST00000429644.7	2941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.065364533659	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGCTAATGTTTAT	3	True	NA	-5	True	AATAAA	-15	NA	81761645	81489702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_81490464_81499109_81499228_81535194_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_67779.nic	chr3	-	2037	14	ISM	ENSG00000114480.13	ENST00000429644.7	2941	16	102	45415	102	-451	5prime_fragment	FALSE	canonical	3	44	junction_7	9.4066575945227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAGGTTGATCTTGATG	-10	True	NA	NA	False	NA	NA	NA	81761543	81535117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_67785.known	chr3	+	2644	7	FSM	ENSG00000083937.10	ENST00000676705.1	2644	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.871664578939	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	11	True	NA	24	True	AATAAA	-14	NA	87227311	87255486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87240326_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_67788.known	chr3	+	2651	7	FSM	ENSG00000083937.10	ENST00000472024.3	2651	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	216.577738160381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	8	True	NA	24	True	AATAAA	-14	NA	87227308	87255486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87240322_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_67790.known	chr3	+	2590	6	FSM	ENSG00000083937.10	ENST00000263780.9	2590	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	23.2671442166846	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAAGAATGATCTT	8	True	NA	94	True	ATTAAA	-22	NA	87227308	87255556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_67796.known	chr3	+	2528	5	FSM	ENSG00000083937.10	ENST00000471660.5	2528	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	193.089843078293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTTCAAAAGA	-30	True	NA	86	True	ATTAAA	-14	NA	87227270	87255548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_87227557_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_6780.nic	chr1	+	1638	6	NIC	ENSG00000163156.12	novel	869	7	NA	NA	-32	0	intron_retention	FALSE	canonical	3	465	junction_1	55.003999854556	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	9315	False	NA	15	True	AATAAA	-25	NA	151165989	151169138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151168339_151168985
transcript_67800.nic	chr3	+	963	4	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-61	8923	-42	-2480	5prime_fragment	FALSE	canonical	3	32	junction_3	7.1336448530109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTTTTTTTTTTTTT	1048	False	NA	NA	False	ATTAAA	-18	NA	88059212	88126575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133
transcript_67801.known	chr3	-	1063	4	FSM	ENSG00000163320.12	ENST00000462901.5	1063	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	356.382753043223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTTGATTGTGTGG	-14	False	NA	-24	True	ATTAAA	-1	NA	88149885	88055425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_88056000_88058018_88058224_88140969_88141079_88149710
transcript_67802.known	chr3	-	4548	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	391.091634616066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATCTTACTGAGTTAT	-24	True	NA	45	True	AATATA	-19	NA	88059005	88051949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
transcript_67804.known	chr3	-	4495	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	92.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-1	True	NA	51	True	AATATA	-25	NA	88059048	88051943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_88056000_88058018_88058224_88058814
transcript_67809.nic	chr3	+	481	2	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-61	49054	-42	-42611	5prime_fragment	TRUE	canonical	3	49	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGAGAATTTGTTTT	1048	False	NA	NA	False	TATAAA	-18	NA	88059212	88086444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_88059506_88086256
transcript_67810.known	chr3	+	6460	9	FSM	ENSG00000175105.8	ENST00000636215.2	6460	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	8.90224690738243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTCAATTTTATGT	-11	True	NA	16	True	AATAAA	-17	NA	88059254	88144660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133_88126270_88128808_88129012_88129686_88129827_88135060_88135203_88138704_88141049_88141644
transcript_67811.known	chr3	+	2414	3	FSM	ENSG00000179021.10	ENST00000318887.8	2414	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	21.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGTATCGTTCAGAT	-18	True	NA	17	True	AATAAA	-29	NA	88149958	88157965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_88150186_88153229_88153472_88156020
transcript_67814.known	chr3	+	1259	3	FSM	ENSG00000179021.10	ENST00000486971.1	1259	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	71	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATATTTTCCTTTTACT	10	True	NA	38	True	AATAAA	-44	NA	88149986	88156944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_88150186_88153229_88153472_88156126
transcript_67815.known	chr3	-	3372	15	FSM	ENSG00000184500.16	ENST00000394236.9	3372	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_9	16.7650328520588	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAACTCTTCATACAAC	-19	True	NA	55	True	AATAAA	-19	NA	93973896	93873050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_93874406_93876965_93877192_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93973673
transcript_67818.known	chr3	+	3971	10	FSM	ENSG00000169379.17	ENST00000394222.8	3971	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.01387685344754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAGAAATGTAGTTTG	-8	True	NA	NA	False	TATAAA	-20	NA	93980154	94055678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_67819.known	chr3	+	3906	9	FSM	ENSG00000169379.17	ENST00000535334.5	3906	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.515618744995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAACAACACTAGAAAGAA	-24	True	NA	NA	False	TATAAA	-10	NA	93980138	94055668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_6782.known	chr1	+	1094	5	FSM	ENSG00000163156.12	ENST00000461862.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	61.3855642639212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTAGCCTTTCCCAAAT	9347	False	NA	NA	False	ATTAAA	-18	NA	151166021	151167979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325
transcript_67822.nic	chr3	+	1098	7	ISM	ENSG00000169379.17	ENST00000679587.1	1654	9	-186	10571	1	-10487	5prime_fragment	FALSE	canonical	3	41	junction_2	9.17726659862414	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAAAAAAAACCAAAAA	-20	True	NA	NA	False	AGTAAA	-45	NA	93980142	94043033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014
transcript_67825.known	chr3	+	3564	11	FSM	ENSG00000169379.17	ENST00000679601.1	3564	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.639787984873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTTAAGCATTTTAAAAA	-11	True	NA	NA	False	AATATA	-42	NA	93980151	94055131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_93995873_93995945_93996547_93996685_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_67832.known	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.5565145763173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	38	True	NA	8	True	AATAAA	-16	NA	94063060	94131832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
transcript_67836.known	chr3	+	3524	11	FSM	ENSG00000169379.17	ENST00000681380.1	3524	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.4181553500697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTTAAGCATTTTAAAAA	-21	True	NA	NA	False	AATATA	-42	NA	93980141	94055131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94037931_94038019_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_67839.known	chr3	+	751	2	FSM	ENSG00000178694.10	ENST00000477077.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTCAGCAACTTTTT	-43	True	NA	NA	False	AGTAAA	-13	NA	94062979	94064403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_94063139_94063811
transcript_67840.known	chr3	+	1399	3	FSM	ENSG00000169379.17	ENST00000492165.3	1399	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGTCATGTGGTTAG	-21	True	NA	NA	False	ATTAAA	-12	NA	93980141	94004645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_93980483_93995873_93995945_94003658
transcript_67841.known	chr3	-	2646	2	FSM	ENSG00000286447.1	ENST00000662485.1	2646	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATGACATTAAAAACTG	NA	False	NA	NA	False	AATAAA	-3	NA	96814407	96810837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_96813111_96814034
transcript_67843.known	chr3	+	2058	5	FSM	ENSG00000080224.18	ENST00000470610.6	2058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.11737237261468	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATTCATGTCTATATT	-4	True	NA	15	True	AATAAA	-24	NA	96814580	97244696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_96815009_96866824_96866890_96987329_96987994_97226263_97226420_97243951
transcript_67844.known	chr3	+	1630	9	FSM	ENSG00000113966.10	ENST00000335979.6	1630	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	27.3287280165031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	11	True	AATAAA	-20	NA	97764520	97798535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_97764978_97765990_97766090_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_67846.known	chr3	+	1590	9	FSM	ENSG00000113966.10	ENST00000394206.5	1590	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	27.3287280165031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	11	True	AATAAA	-20	NA	97764520	97798535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_97764978_97766631_97766691_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_67849.known	chr3	+	3988	8	FSM	ENSG00000113966.10	ENST00000463745.6	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	8.28817697392016	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGTGATTAAGAAATGG	-7	True	NA	52	True	AATAAA	-35	NA	97764757	97801229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_6785.known	chr1	-	1347	6	FSM	ENSG00000163159.15	ENST00000354473.4	1347	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	325.336379767157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	10	True	NA	-15	True	AATAAA	-14	NA	151190158	151176461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151177065_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_67853.known	chr3	+	10779	22	FSM	ENSG00000080200.10	ENST00000389622.7	10779	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	9.51499592182205	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTAATTTGCTGTTC	5	True	NA	28	True	AATAAA	-34	NA	97822010	97944984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_97822356_97843194_97843262_97864216_97864648_97871841_97878038_97879703_97879749_97879984_97880101_97881071_97881220_97886630_97886768_97888340_97888456_97889354_97889391_97892859_97892994_97895958_97896086_97898882_97899026_97899136_97899264_97900452_97900486_97912166_97912277_97915609_97915737_97933693_97933834_97936784_97936909_97941147_97941307_97942283_97942444_97943225
transcript_67856.known	chr3	-	4854	10	FSM	ENSG00000170854.18	ENST00000394198.7	4854	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	10.3076143496081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-2	True	NA	-6	True	AATAAA	-17	NA	97972431	97941817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_67857.known	chr3	-	2232	10	FSM	ENSG00000170854.18	ENST00000360258.8	2232	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	40.6159367857945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGTCTTCGAGTTT	342	False	NA	NA	False	TATAAA	-11	NA	97972087	97944559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
transcript_67867.known	chr3	-	2709	7	FSM	ENSG00000080819.9	ENST00000647941.2	2709	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	7.20532210707243	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTATATTTTTTGT	-1	True	NA	NA	False	AATAAA	-23	NA	98593611	98579445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98580771_98581406_98581512_98585440_98585660_98588712_98588855_98590631_98590743_98591011_98591156_98592948
transcript_67870.known	chr3	-	865	6	FSM	ENSG00000080822.17	ENST00000502299.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	392.458201596043	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGAAAGAGTACACCTTA	-5	True	NA	NA	False	NA	NA	NA	98522931	98516702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98521652_98521704_98522848
transcript_67871.known	chr3	-	2124	6	FSM	ENSG00000080822.17	ENST00000510545.5	2124	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	396.50604030708	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCAATTGTATATAGA	7058	False	NA	-16	True	AATAAA	-15	NA	98522959	98515486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98521652_98521719_98522848
transcript_67875.known	chr3	-	999	5	FSM	ENSG00000080822.17	ENST00000513287.5	999	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	365.017122886037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCTGCTTTACAATTG	7263	False	NA	-66	True	AATGAA	-26	NA	98522754	98516652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98522541
transcript_67876.known	chr3	-	916	5	FSM	ENSG00000080822.17	ENST00000508902.5	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	333.541976368792	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	1	True	NA	NA	False	NA	NA	NA	98523041	98516710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98522848
transcript_67877.known	chr3	-	582	5	FSM	ENSG00000080822.17	ENST00000512147.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	337.739914727294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	-8	True	NA	NA	False	NA	NA	NA	98522899	98516710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98522848
transcript_6788.known	chr1	-	1511	6	FSM	ENSG00000163159.15	ENST00000368892.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	2	620	junction_5	94.5926001334142	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTGTATTGACCTT	-29	True	NA	-1	True	TATAAA	-24	NA	151190197	151176303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_67882.known	chr3	-	815	4	FSM	ENSG00000080822.17	ENST00000507411.5	815	4	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	62.3983618018579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAGAGCTCCCTGAC	16	True	NA	NA	False	NA	NA	NA	98522875	98516822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98517190_98518884_98518996_98521132_98521443_98522848
transcript_67883.known	chr3	-	598	3	FSM	ENSG00000080822.17	ENST00000513988.1	598	3	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_2	48	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTTTAGAAGGTAGAT	16	True	NA	NA	False	AATAAA	-34	NA	98522875	98518734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98518996_98521132_98521443_98522848
transcript_67886.known	chr3	+	2837	11	FSM	ENSG00000064225.13	ENST00000469105.5	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.3061338152243	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTTGATTACTGACA	5	True	NA	7	True	AATAAA	-24	NA	98732265	98795254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98771120_98771191_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_67891.nic	chr3	+	1936	11	NIC	ENSG00000064225.13	novel	2837	11	NA	NA	29	449	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	16.0996894379985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGGCTTTGTATTAT	119	False	NA	NA	False	AGTAAA	-29	NA	98732407	98794393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_98732533_98756368_98756541_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_67893.known	chr3	+	2109	11	FSM	ENSG00000064225.13	ENST00000394162.5	3571	11	10	1452	0	449	multi-exon	FALSE	canonical	1	1	junction_1	17.4014367222939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGGCTTTGTATTAT	6	True	NA	NA	False	AGTAAA	-29	NA	98732713	98794393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_98733012_98756368_98756541_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_67895.known	chr3	+	1886	10	FSM	ENSG00000064225.13	ENST00000265261.11	3385	10	0	1499	0	418	multi-exon	FALSE	canonical	3	7	junction_1	15.8184140236062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACTAAAGAAAGAATA	-6	True	NA	NA	False	CATAAA	-18	NA	98732254	98794362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_679.nic	chr1	+	2241	4	ISM	ENSG00000142655.13	ENST00000491661.2	637	6	-46	22008	-14	-22008	5prime_fragment	FALSE	canonical	3	95	junction_3	8.25967446224258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTGTTAGATATCAG	NA	False	NA	NA	False	NA	NA	NA	10474935	10601278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_10475003_10495273_10495322_10536212_10536298_10599237
transcript_67908.known	chr3	-	5250	5	FSM	ENSG00000239445.6	ENST00000667875.1	5250	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATGTATAGGAGATGTT	1031	False	NA	NA	False	NA	NA	NA	98732670	98709870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_98714499_98715375_98715522_98715649_98715778_98718418_98718522_98732425
transcript_67911.nnic	chr3	+	1253	11	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_2	214.014111684253	718	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTGAGCGGACCGTG	-2	True	NA	30	True	AATAAA	-22	NA	99817831	100178603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_67919.known	chr3	+	3697	19	FSM	ENSG00000036054.13	ENST00000394144.9	3697	19	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	45.5463744135823	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	-14	True	NA	22	True	AATAAA	-19	NA	100260991	100325238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100311832_100311878_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_67921.known	chr3	+	3656	18	FSM	ENSG00000036054.13	ENST00000344949.9	3656	18	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_14	24.2170119506943	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCTCTCTTTCT	-5	True	NA	35	True	AATAAA	-32	NA	100261000	100325251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_67927.known	chr3	+	7233	10	FSM	ENSG00000114021.12	ENST00000394140.9	7233	10	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	41.4165828302304	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGAAAACAGTGCCTT	24	True	NA	NA	False	AGTAAA	-25	NA	100334756	100361635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_67932.known	chr3	+	1469	9	FSM	ENSG00000114021.12	ENST00000465368.5	1469	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	43.8347393627474	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	6	True	NA	10	True	ATTAAA	-15	NA	100334738	100355351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_67939.known	chr3	+	1864	4	FSM	ENSG00000206535.8	ENST00000383693.8	1864	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.64997911442	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGAGTTTACTTTCTTA	-21	True	NA	19	True	AATAAA	-15	NA	100401538	100456319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100402440_100429696_100429886_100451718_100451950_100455776
transcript_67942.known	chr3	+	1723	4	FSM	ENSG00000206535.8	ENST00000466996.5	1723	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	19.3620476419435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTATTTTAATAGAATAAA	-28	True	NA	NA	False	AATAAA	-10	NA	100401531	100456188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100402440_100429696_100429886_100451735_100451950_100455776
transcript_67945.nnic	chr3	+	1773	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	34.296501279285	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	NA	False	NA	16	True	AATAAA	-25	NA	100492559	100577444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_67946.nic	chr3	+	1685	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	53.2585413076834	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	-36	True	NA	16	True	AATAAA	-25	NA	100492576	100577444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100519532_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_67948.nic	chr3	+	1407	6	NIC	ENSG00000181458.10	novel	1567	6	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	61.6064931642761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTTCTGTGGTGACT	NA	False	NA	3	True	ATTAAA	-16	NA	100492564	100570914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100570608
transcript_67949.known	chr3	+	1567	6	FSM	ENSG00000181458.10	ENST00000323523.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	27.9614019677126	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	6	True	NA	16	True	AATAAA	-25	NA	100492618	100577444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_67950.nnic	chr3	+	1182	4	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	53.074371299987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	NA	False	NA	16	True	AATAAA	-25	NA	100492559	100577444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100519461_100519609_100568821_100568968_100576924
transcript_67951.nnic	chr3	+	1023	3	NIC	ENSG00000181458.10	novel	1567	6	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	68.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	-41	True	NA	16	True	AATAAA	-25	NA	100492571	100577444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100492929_100568821_100568968_100576924
transcript_67952.known	chr3	+	1910	8	FSM	ENSG00000181458.10	ENST00000403410.5	1910	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	67.671475315886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTGCAGACACCTGAA	38	True	NA	4	True	AATAAA	-13	NA	100492650	100577432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100492929_100519076_100519317_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_67955.known	chr3	+	1816	8	FSM	ENSG00000114354.15	ENST00000490574.6	1816	8	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	239.10351272183	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	111	False	NA	18	True	AATAAA	-15	NA	100709294	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67956.known	chr3	+	1793	8	FSM	ENSG00000114354.15	ENST00000676431.1	1793	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	359.181098089097	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	29	False	NA	18	True	AATAAA	-15	NA	100709462	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_67957.known	chr3	+	1906	8	FSM	ENSG00000114354.15	ENST00000675553.1	1906	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	314.809887560925	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	5	True	NA	18	True	AATAAA	-15	NA	100709361	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67958.known	chr3	+	1783	8	FSM	ENSG00000114354.15	ENST00000476228.5	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	232.520264642434	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	55	True	NA	18	True	AATAAA	-15	NA	100709605	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_67959.known	chr3	+	1907	8	FSM	ENSG00000114354.15	ENST00000240851.9	1907	8	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	108.962641042043	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	-57	True	NA	18	True	AATAAA	-15	NA	100709493	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_6796.nic	chr1	+	3807	16	NIC	ENSG00000143398.20	novel	3800	16	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_3	158.242289613814	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-30	True	NA	36	True	AATAAA	-20	NA	151198541	151249531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151199082_151224247_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_67960.known	chr3	+	1854	8	FSM	ENSG00000114354.15	ENST00000675243.1	1854	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	316.497993029714	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	-15	True	NA	18	True	AATAAA	-15	NA	100709535	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709722_100713653_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67961.known	chr3	+	1888	8	FSM	ENSG00000114354.15	ENST00000676395.1	1888	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	320.55213845705	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	62	True	NA	18	True	AATAAA	-15	NA	100709612	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100709822_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67962.nic	chr3	+	2044	8	NIC	ENSG00000114354.15	novel	1759	9	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	348.487753422863	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	243	False	NA	18	True	AATAAA	-15	NA	100709918	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_67963.known	chr3	+	2005	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	301.330315739511	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	294	False	NA	18	True	AATAAA	-15	NA	100709969	100748964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_67964.known	chr3	-	4973	24	FSM	ENSG00000138468.16	ENST00000394095.7	4973	24	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	17.2742801917668	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTGTATATCATGAAAT	-15	True	NA	NA	False	AATAAA	-18	NA	101513212	101324204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
transcript_67966.known	chr3	+	1813	2	FSM	ENSG00000174173.7	ENST00000309922.7	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	0	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAGCCATTCAAGCA	-4	True	NA	26	True	AGTAAA	-23	NA	101561867	101566446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101562004_101564769
transcript_67967.known	chr3	+	1017	2	FSM	ENSG00000174173.7	ENST00000495642.1	1017	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATAAGAGTATGCAGCC	110	False	NA	NA	False	NA	NA	NA	101562040	101565717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101562110_101564769
transcript_67970.known	chr3	+	2165	5	FSM	ENSG00000081154.12	ENST00000460231.5	2165	5	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	804.80261555241	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	1	True	NA	-21	True	NA	NA	NA	101574189	101594407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101579841_101580005_101585436_101585512_101590214_101590271_101592626
transcript_67972.known	chr3	+	2285	5	FSM	ENSG00000081154.12	ENST00000265260.8	2285	5	0	0	0	0	multi-exon	FALSE	canonical	3	1903	junction_1	270.033678455114	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTTACTGGTTTTTG	-9	True	NA	37	True	AATAAA	-43	NA	101574179	101594465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101579789_101580005_101585436_101585512_101590214_101590271_101592626
transcript_67973.known	chr3	+	786	5	FSM	ENSG00000081154.12	ENST00000498274.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	1051.01546135154	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGGTGGGTGTAAAG	-3	True	NA	-57	True	ATTAAA	-18	NA	101574185	101592771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101579588_101580005_101585436_101585512_101590214_101590271_101592626
transcript_67979.known	chr3	+	2028	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1160.24432292896	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTTATTTTCTATT	5	True	NA	9	True	AATAAA	-15	NA	101574193	101594437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
transcript_6798.known	chr1	+	3800	16	FSM	ENSG00000143398.20	ENST00000368888.9	3800	16	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	172.998599865882	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-20	True	NA	36	True	AATAAA	-20	NA	151198551	151249531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151199082_151224244_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_67984.known	chr3	+	742	3	FSM	ENSG00000081154.12	ENST00000486406.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCATTTGTTTTGTTT	30	True	NA	25	True	AGTAAA	-27	NA	101574218	101593251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101574280_101590214_101590271_101592626
transcript_67985.known	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	40	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101576500_101576900
transcript_67986.nic	chr3	-	1887	5	ISM	ENSG00000066422.6	ENST00000690651.1	4922	11	-24	15238	-21	5920	5prime_fragment	FALSE	canonical	3	43	junction_3	7.43303437365925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAAGATGAAACAG	4	True	NA	NA	False	NA	NA	NA	101677156	101664692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_101664715_101664963_101665809_101671129_101671362_101671977_101672214_101676604
transcript_67987.known	chr3	-	2115	2	FSM	ENSG00000066422.6	ENST00000461821.1	2115	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATGTCTTATTTTGT	9594	False	NA	NA	False	AATAAA	-18	NA	101677118	101670612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101672214_101676604
transcript_6799.known	chr1	+	3767	15	FSM	ENSG00000143398.20	ENST00000349792.9	3767	15	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	57.0635163476558	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTCTGATTCTTTTT	-21	True	NA	41	True	AATAAA	-25	NA	151198550	151249536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_67995.known	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	4949	junction_5	1250.11893834147	6043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-6	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_680.nnic	chr1	+	315	3	NNC	ENSG00000142655.13	novel	637	6	NA	NA	-4	-16277	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	51.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTAGTGACAGGGT	-7	True	NA	NA	False	AATAAA	-21	NA	10474945	10520012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_10475003_10495273_10495322_10519802
transcript_6800.known	chr1	+	3737	15	FSM	ENSG00000143398.20	ENST00000409426.5	3737	15	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	99.6848093968675	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	-20	True	NA	9	True	TATAAA	-20	NA	151198551	151249504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_68001.known	chr3	-	799	5	FSM	ENSG00000114391.13	ENST00000469605.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	4949	junction_4	1397.16147509871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAAGTTTCACAGT	-6	True	NA	NA	False	NA	NA	NA	101686695	101682041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_68002.known	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	3134.19330729615	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	7	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_68005.known	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7222	junction_1	491.122693428027	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	0	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
transcript_68006.nic	chr3	+	1654	9	ISM	ENSG00000182504.11	ENST00000341893.8	7672	11	-22	12387	-1	-1337	5prime_fragment	FALSE	canonical	3	16	junction_3	3.58599707194526	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAAGAAACCATATC	0	True	NA	NA	False	CATAAA	-23	NA	101724591	101758175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_101724720_101726593_101726737_101727382_101727542_101728835_101728938_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633
transcript_68008.known	chr3	+	2888	8	FSM	ENSG00000182504.11	ENST00000489172.5	2888	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	7.83503382902976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCCCAGGACCCAGGA	1	True	NA	NA	False	NA	NA	NA	101724592	101759512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633
transcript_68010.known	chr3	+	7672	11	FSM	ENSG00000182504.11	ENST00000341893.8	7672	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	3.79473319220206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCATCTGTTTATTTT	-1	True	NA	17	True	AATAAA	-17	NA	101724613	101770562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101728835_101728938_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633_101758424_101762484_101762561_101764846
transcript_68013.known	chr3	+	8568	8	FSM	ENSG00000144815.17	ENST00000273347.10	8568	8	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_6	28.6156800173811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTTTTTCT	8	True	NA	NA	False	ATTAAA	-17	NA	101779210	101828231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_6802.known	chr1	+	3613	14	FSM	ENSG00000143398.20	ENST00000368890.8	3613	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	142.618579335224	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-19	True	NA	36	True	AATAAA	-20	NA	151198552	151249531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242437_151242568_151246919_151246966_151247862
transcript_68024.nnic	chr3	+	1634	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-14	4936	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	56.0049997768056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAGAATTTGAGAAGTT	-15	True	NA	NA	False	AATAAA	-20	NA	101779187	101806236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_68026.nic	chr3	+	1566	6	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-23	21095	-14	5836	5prime_fragment	FALSE	canonical	3	107	junction_5	24.8241817589221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGCTTGATGATTTGT	-15	True	NA	NA	False	AATAAA	-13	NA	101779187	101807136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052
transcript_68027.nic	chr3	+	1708	6	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-23	20953	-14	5978	5prime_fragment	FALSE	canonical	3	107	junction_5	24.8241817589221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTATGTGCATAATTCT	-15	True	NA	NA	False	ATTAAA	-25	NA	101779187	101807278	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052
transcript_68031.known	chr3	-	3669	20	FSM	ENSG00000114423.23	ENST00000646825.1	3669	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.7349569716899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTAATGCAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	105869039	105658414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_105659230_105670232_105670353_105671023_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
transcript_68034.known	chr3	-	6749	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	29.6631812351213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	-15	True	NA	NA	False	TATAAA	-17	NA	105869012	105655460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
transcript_68048.nnic	chr3	-	452	3	NNC	ENSG00000242759.8	novel	950	8	NA	NA	207877	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	106913431	106842906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_106843068_106843178_106843257_106913218
transcript_68051.known	chr3	+	5519	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCGCCCGCCTG	0	True	NA	NA	False	NA	NA	NA	107240663	107251102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107241088_107246007
transcript_68054.known	chr3	+	9009	18	FSM	ENSG00000114439.19	ENST00000325805.13	9009	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	9.33201506590679	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTCCCCCTAAACTG	-10	True	NA	21	True	AATAAA	-34	NA	107522961	107811339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_68058.known	chr3	+	8930	17	FSM	ENSG00000114439.19	ENST00000415149.6	8930	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	8.09296569559021	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAACATCGAATGATG	NA	False	NA	6	True	AATAAA	-19	NA	107522935	107811324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_6806.nnic	chr1	+	3494	13	NIC	ENSG00000143398.20	novel	3613	14	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_11	141.711463505564	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-30	True	NA	36	True	AATAAA	-20	NA	151198541	151249531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151246919_151246966_151247862
transcript_68067.nic	chr3	+	1611	11	NIC	ENSG00000114439.19	novel	1586	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	12.1412519947491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	1008	False	NA	6	True	ATTAAA	-12	NA	107525379	107773066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_107525491_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_68069.known	chr3	+	1586	11	FSM	ENSG00000114439.19	ENST00000402163.6	1586	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.7078715763105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	7	True	NA	6	True	ATTAAA	-12	NA	107525401	107773066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_107525488_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_68071.known	chr3	-	5292	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	26.6953179415417	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	6391	False	108091051	NA	False	ATTAAA	-19	NA	108091031	108043090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_68075.known	chr3	-	3057	11	FSM	ENSG00000114446.5	ENST00000264538.4	3057	11	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_4	34.6907768722466	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTATTTTCTTCCATC	-2	True	NA	NA	False	AATAAA	-16	NA	108222424	108160811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_68077.nic	chr3	-	1445	10	NIC	ENSG00000114446.5	novel	3057	11	NA	NA	4	-1456	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	132.812315359349	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTTCACTAATCATTA	-9	True	NA	-1	True	AATAAA	-26	NA	108222431	108162267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108222110
transcript_68082.known	chr3	-	755	4	FSM	ENSG00000114446.5	ENST00000465024.1	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	15.369522511198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTGAGTATCATCATT	186	False	NA	NA	False	AATATA	-41	NA	108222360	108213798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108214022_108218534_108218654_108219409_108219573_108222110
transcript_68083.known	chr3	-	4066	21	FSM	ENSG00000163507.15	ENST00000295746.13	4066	21	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_9	8.93014557552115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAAAACGTTAAAGAAA	-7	True	NA	NA	False	AATAAA	-19	NA	108589438	108549863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_68088.nic	chr3	-	2537	20	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-41	2484	-23	-1232	5prime_fragment	FALSE	canonical	3	39	junction_8	8.24789068980821	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGATTAAAACCTT	373	False	NA	NA	False	AAAACA	-10	NA	108589479	108552347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_68092.nic	chr3	-	2425	19	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-13	3842	1	-2590	5prime_fragment	FALSE	canonical	3	39	junction_7	8.42266929332331	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAACAGAGAAAAGAAGT	-20	True	NA	NA	False	AATAGA	-5	NA	108589451	108553705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_68093.nic	chr3	-	2437	18	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-50	4512	-32	-3260	5prime_fragment	FALSE	canonical	3	39	junction_6	8.43046050698665	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTCTAGTTCTATA	364	False	NA	NA	False	AAAAAG	-33	NA	108589488	108554375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_68097.nic	chr3	-	1819	10	ISM	ENSG00000163507.15	ENST00000487834.5	2014	14	213	6930	0	-6930	5prime_fragment	FALSE	canonical	3	39	junction_1	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGGTTATAAGAAAAGAC	0	True	NA	NA	False	AATAAA	-20	NA	108589431	108567664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_68098.known	chr3	-	2014	14	FSM	ENSG00000163507.15	ENST00000487834.5	2014	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.4123549890835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTTTAACTCCTCAT	-5	True	NA	NA	False	NA	NA	NA	108589644	108560734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108560842_108563121_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_68099.nic	chr3	-	1012	7	ISM	ENSG00000163507.15	ENST00000487834.5	2014	14	192	18429	0	2311	5prime_fragment	FALSE	canonical	3	40	junction_2	5.34633831078181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAAAATGTTTTGATGTG	-21	True	NA	NA	False	AATAAA	-25	NA	108589452	108579163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_68100.known	chr3	-	511	2	FSM	ENSG00000163507.15	ENST00000461666.1	511	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAAGGGTAAAAGTAC	0	True	NA	NA	False	AATAGA	-15	NA	108589431	108584859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_108585213_108589273
transcript_68101.known	chr3	+	5304	33	FSM	ENSG00000198919.13	ENST00000361582.8	5304	33	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_21	24.0473978581883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	-3	True	NA	5	True	AATAAA	-16	NA	108589721	108694840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_68106.nic	chr3	+	2219	17	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-44	45900	-27	828	5prime_fragment	FALSE	canonical	3	125	junction_16	17.0692523269181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGACTAAGAATAAAA	-11	True	NA	NA	False	AATAAA	-42	NA	108589677	108648940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917
transcript_68109.nic	chr3	+	2187	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-35	46728	-18	0	5prime_fragment	FALSE	canonical	3	126	junction_1	15.0176192816601	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	-2	True	NA	NA	False	NA	NA	NA	108589686	108648112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_68110.nic	chr3	+	3016	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-43	45907	-26	821	intron_retention	FALSE	canonical	3	126	junction_1	15.0176192816601	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAGAAGAAGACTAAG	-10	True	NA	NA	False	AATAAA	-35	NA	108589678	108648933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_68111.known	chr3	+	2076	16	FSM	ENSG00000198919.13	ENST00000479138.5	2076	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	36.6627876736071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	34	False	NA	NA	False	NA	NA	NA	108590054	108648112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_68114.nic	chr3	+	2092	15	NIC	ENSG00000198919.13	novel	5304	33	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	39.5918590889901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	-11	True	NA	NA	False	NA	NA	NA	108589677	108648112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_108589840_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_68115.nic	chr3	+	676	6	ISM	ENSG00000198919.13	ENST00000495008.5	5164	31	-27	69522	-27	-4601	5prime_fragment	FALSE	canonical	3	126	junction_1	19.6203975494892	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAAGAAAGAGGTATGT	-11	True	NA	12	True	NA	NA	NA	108589677	108624510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443
transcript_68123.nnic	chr3	-	1412	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	1515	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	15.0701484730576	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	1507	False	NA	-7	True	AATAAA	-22	NA	109315002	109293787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109314739
transcript_68124.known	chr3	-	1383	9	FSM	ENSG00000163530.4	ENST00000478945.1	1383	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_8	11.3219918742243	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-8	True	NA	-7	True	AATAAA	-22	NA	109316517	109293787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316283
transcript_68125.nnic	chr3	-	1421	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	13.2988486343743	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	NA	False	NA	-7	True	AATAAA	-22	NA	109316608	109293787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316336
transcript_68127.nic	chr3	-	1191	8	ISM	ENSG00000163530.4	ENST00000478945.1	1383	9	1920	0	1920	0	3prime_fragment	FALSE	canonical	3	41	junction_3	6.81834260787527	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-1	True	NA	-7	True	AATAAA	-22	NA	109314597	109293787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509
transcript_6813.known	chr1	+	1319	10	FSM	ENSG00000159352.16	ENST00000368884.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	2133	junction_4	226.530405666343	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGGTTTTGAGTGTG	-18	True	NA	38	True	AATAAA	-34	NA	151254733	151267479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_68149.nic	chr3	-	2503	7	NIC	ENSG00000121570.13	novel	2788	7	NA	NA	0	-211	combination_of_known_junctions	FALSE	canonical	3	172	junction_6	1219.21018377564	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGTGTATTGTTCCTT	1	True	NA	-32	True	AATAAA	-20	NA	109337545	109326354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333921_109337463
transcript_68150.known	chr3	-	2817	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-3	-26	3	multi-exon	FALSE	canonical	3	2818	junction_3	421.61317183725	1991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGTTTATTTACTC	14	False	NA	-4	True	AATAAA	-21	NA	109337572	109326140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_68165.known	chr3	-	1087	6	FSM	ENSG00000121570.13	ENST00000463966.5	1087	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	1319.702542242	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTATTTTTAGTA	-10	True	NA	NA	False	NA	NA	NA	109337522	109327524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109328025_109328889_109329082_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_68170.nnic	chr3	-	2373	6	NIC	ENSG00000121570.13	novel	2788	7	NA	NA	-85	-211	combination_of_known_splicesites	FALSE	canonical	3	235	junction_2	1304.86434543979	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGTGTATTGTTCCTT	NA	False	NA	-32	True	AATAAA	-20	NA	109337631	109326354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_109328025_109328889_109329089_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_68186.known	chr3	-	1225	5	FSM	ENSG00000121570.13	ENST00000478791.1	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	2818	junction_1	201.413132640352	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGGGACCACAGTTT	-3	True	NA	NA	False	NA	NA	NA	109337515	109329975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_68205.known	chr3	-	680	2	FSM	ENSG00000121570.13	ENST00000489281.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	2843	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTACAGGCTGGTTTT	1	True	NA	NA	False	AGTAAA	-13	NA	109337545	109333395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_109333994_109337463
transcript_68212.nnic	chr3	-	1665	3	NIC	ENSG00000242242.7	novel	1415	4	NA	NA	-76516	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_1	4	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTGGAATTACTTC	1389	False	NA	1	True	AGTAAA	-34	NA	110969992	110892122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_110892604_110893137_110893831_110969501
transcript_68214.known	chr3	+	5197	6	FSM	ENSG00000177707.11	ENST00000485303.6	5197	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	9.72419662491457	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTAATAAGTTCAT	11	True	NA	14	True	AATAAA	-25	NA	111071815	111137560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111072178_111112029_111112372_111118655_111118953_111122120_111122239_111126183_111126336_111133634
transcript_68218.known	chr3	+	434	2	FSM	ENSG00000240891.8	ENST00000474484.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGTAGTATTTTGT	-1	True	NA	9	True	AATAAA	-19	NA	111732460	111778458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111732704_111778267
transcript_68219.known	chr3	+	5543	18	FSM	ENSG00000144824.21	ENST00000393925.7	5543	18	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	23.4238809912457	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCACATTTGAAAATAAA	0	True	NA	3	True	ATTAAA	-12	NA	111859795	111976247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
transcript_68220.known	chr3	+	801	6	FSM	ENSG00000144827.9	ENST00000494817.1	801	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	109.207325761599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATGACATTGTACCTT	24	True	NA	NA	False	NA	NA	NA	111979052	111991540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111990699_111990752_111991376
transcript_68224.known	chr3	+	2604	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_4	13.6816482925121	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	-3	True	NA	33	True	AATAAA	-24	NA	111979025	111993368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
transcript_68227.known	chr3	+	1339	4	FSM	ENSG00000144827.9	ENST00000491580.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	99.2717930173969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAAATTGAGCTTT	-19	True	NA	NA	False	TATAAA	-15	NA	111979009	111992271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111979204_111986263_111986376_111986913_111987052_111991376
transcript_68228.known	chr3	+	1129	5	FSM	ENSG00000144834.14	ENST00000478951.6	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.35607132140714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAAAGTTCATTC	-16	True	NA	6	True	AATAAA	-18	NA	111998921	112013885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111999115_111999420_111999603_112000771_112000947_112011762_112011866_112013409
transcript_68229.known	chr3	+	1488	5	FSM	ENSG00000144834.14	ENST00000393917.6	1488	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.12414379544733	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTAAAGTTCATTCTT	0	True	NA	8	True	AATAAA	-20	NA	111998738	112013887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111999115_111999246_111999603_112000771_112000947_112011762_112011866_112013409
transcript_68230.known	chr3	+	1164	4	FSM	ENSG00000144834.14	ENST00000455401.6	1164	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACAGTGTAAAGTTC	223	False	NA	2	True	AATAAA	-14	NA	111999188	112013881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_111999603_112000771_112000947_112011762_112011866_112013409
transcript_68231.known	chr3	+	2237	6	FSM	ENSG00000114529.13	ENST00000264848.10	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	12.0099958368019	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	0	True	NA	20	True	AATACA	-17	NA	112086388	112118210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
transcript_68235.known	chr3	+	1524	7	FSM	ENSG00000091972.18	ENST00000473539.5	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	121.667579905248	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTACTGCTTTGCTAA	-16	True	NA	NA	False	NA	NA	NA	112333155	112362132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112333225_112335942_112336018_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_68240.known	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	71.8871337584133	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	-16	True	NA	28	True	ATTAAA	-16	NA	112333155	112362812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_68242.nnic	chr3	+	2200	6	NNC	ENSG00000091972.18	novel	2129	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	118.986721948291	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	505	False	NA	28	True	ATTAAA	-16	NA	112333077	112362812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_112333225_112344961_112345289_112347348_112347424_112347557_112347831_112349711_112349820_112361542
transcript_68248.nnic	chr3	+	2086	5	NNC	ENSG00000091972.18	novel	2129	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	118.941950126942	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	6	True	NA	28	True	ATTAAA	-16	NA	112333139	112362812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_112333225_112344961_112345289_112347534_112347831_112349711_112349820_112361542
transcript_68249.known	chr3	+	2017	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	94.4176228254027	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	6	True	NA	25	True	ATTAAA	-13	NA	112333177	112362809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
transcript_6825.nnic	chr1	+	1159	9	NIC	ENSG00000159352.16	novel	1319	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	815.163020505715	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTTGCTTCAAAT	-18	True	NA	19	True	AATAAA	-15	NA	151254733	151267460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_151254809_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_68253.known	chr3	-	1568	12	FSM	ENSG00000144848.11	ENST00000283290.10	1568	12	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_11	37.944936181501	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-47	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
transcript_68254.nic	chr3	-	1179	12	NIC	ENSG00000144848.11	novel	1568	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	195.078666056576	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-47	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561845
transcript_68255.nnic	chr3	-	1303	12	NNC	ENSG00000144848.11	novel	1568	12	NA	NA	-250	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	205.547645840919	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	4	True	NA	-3	True	AATAAA	-17	NA	112562296	112532509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112562055
transcript_68259.known	chr3	+	2444	8	FSM	ENSG00000138459.9	ENST00000261034.6	2444	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	67.671475315886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTTGCCACTCTG	-18	True	NA	3	True	ATTAAA	-17	NA	112562071	112584156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112580707_112581178_112581327_112582670
transcript_68261.known	chr3	+	4366	7	FSM	ENSG00000138459.9	ENST00000492406.6	4366	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	20.6619618300554	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCGAAGTTCTGATATGT	2	True	NA	NA	False	AATAAA	-19	NA	112562044	112585579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112581327_112582670
transcript_68265.nic	chr3	-	2277	7	ISM	ENSG00000091986.16	ENST00000439685.6	3557	8	2123	164	-1080	-164	3prime_fragment	FALSE	canonical	3	43	junction_6	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATGAGTTATTATTGAAA	2213	False	NA	0	True	AATAAA	-18	NA	112639177	112605264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027
transcript_68266.known	chr3	-	12301	8	FSM	ENSG00000091986.16	ENST00000206423.8	12301	8	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_7	5.32993088747932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTGTGGAGTCTGG	-4	True	NA	-2	True	AATAAA	-13	NA	112641143	112596796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640326
transcript_68272.known	chr3	-	4820	9	FSM	ENSG00000163608.15	ENST00000314400.10	4820	9	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_7	21.759696114606	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-7	True	NA	-5	True	ATTAAA	-18	NA	113019671	113002443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113017447_113017603_113019541
transcript_68276.known	chr3	-	1382	8	FSM	ENSG00000163608.15	ENST00000462295.5	1382	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	49.4525127815378	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGAACTGCTAAGATCT	-2	True	NA	NA	False	NA	NA	NA	113019666	113005480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011166_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_68279.known	chr3	-	1817	8	FSM	ENSG00000163608.15	ENST00000469169.5	1817	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	50.6778541175451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	0	True	NA	NA	False	NA	NA	NA	113019664	113005242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013362_113013952_113014033_113019541
transcript_68280.known	chr3	-	2056	8	FSM	ENSG00000163608.15	ENST00000473284.5	2056	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	31.3453443472057	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	NA	False	NA	NA	False	NA	NA	NA	113019861	113005242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_68285.known	chr3	-	4672	7	FSM	ENSG00000163608.15	ENST00000383675.6	4672	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	49.1169239898247	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	NA	False	NA	-5	True	ATTAAA	-18	NA	113019733	113002443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113017447_113017603_113019541
transcript_68290.known	chr3	+	1921	6	FSM	ENSG00000163607.18	ENST00000383678.8	1921	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	23.8713217061812	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTTTTCTTTAGA	3	True	NA	3	True	ATTAAA	-13	NA	112990983	113001969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_68298.known	chr3	-	1576	6	FSM	ENSG00000163608.15	ENST00000489848.5	1576	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	57.7394146142823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTTAATATGAAAAATCT	-6	True	NA	NA	False	NA	NA	NA	113019670	113005321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113019541
transcript_68300.known	chr3	+	715	5	FSM	ENSG00000163607.18	ENST00000488781.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	97.9830980322627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCCGGTTTAGCTGAA	28	False	NA	NA	False	NA	NA	NA	112991008	113000919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112993025_112993125_112996891_112996992_112999445_112999565_113000849
transcript_68304.known	chr3	+	1787	5	FSM	ENSG00000163607.18	ENST00000383677.7	1787	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	89.786900492221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCTGGATAACAAATTA	4	True	NA	-31	True	ATTAAA	-13	NA	112990984	113001935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_68308.known	chr3	-	520	5	FSM	ENSG00000163608.15	ENST00000496340.1	520	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	38.1927676399603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCAAGAGTTCATTAT	-7	True	NA	NA	False	NA	NA	NA	113019671	113012792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113012812_113013271_113013404_113013948_113014033_113017447_113017603_113019541
transcript_68309.known	chr3	+	679	4	FSM	ENSG00000163607.18	ENST00000295864.9	679	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	111.483930082621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGCTAACTGGAGTT	6	True	NA	NA	False	NA	NA	NA	112990986	113000960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_112991336_112996891_112996992_112999445_112999565_113000849
transcript_68311.known	chr3	-	1512	4	FSM	ENSG00000163608.15	ENST00000469809.5	1512	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.0053761110008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCATATTAAAGTGAG	6	True	NA	-50	True	NA	NA	NA	113019658	113004953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113006005_113008170_113008431_113013948_113014033_113019541
transcript_68315.known	chr3	+	2173	4	FSM	ENSG00000144857.15	ENST00000485230.5	2173	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACTGCCACTTGGTG	2	True	NA	NA	False	AGTAAA	-18	NA	113211564	113252005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_113212017_113216186_113216279_113249721_113249900_113250554
transcript_68316.nic	chr3	-	3086	18	ISM	ENSG00000285943.1	ENST00000649772.1	6837	39	-25	82985	-25	-82985	5prime_fragment	FALSE	canonical	0	0	junction_17	26.6015063184081	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGCTTTCAGGAATATG	-5	True	NA	-35	True	AATAAA	-20	NA	113515176	113444885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_68317.nic	chr3	-	2832	18	ISM	ENSG00000285943.1	ENST00000649772.1	6837	39	-25	83239	-25	-83239	5prime_fragment	FALSE	canonical	0	0	junction_17	26.6015063184081	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCAACAACCAACT	-5	True	NA	NA	False	AATAAA	-26	NA	113515176	113445139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_68322.known	chr3	-	5417	18	FSM	ENSG00000163611.11	ENST00000295872.8	5417	18	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_17	19.1034336303867	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGCCAATTTTAT	15	True	NA	NA	False	AATAAA	-21	NA	113515156	113442717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113514896
transcript_68323.nic	chr3	-	3348	18	NIC	ENSG00000163611.11	novel	5417	18	NA	NA	-1	618	intron_retention	FALSE	canonical	0	0	junction_17	26.6015063184081	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAAATGTGGTAACATT	-17	True	NA	-5	True	AATAAA	-20	NA	113515188	113444635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_68326.known	chr3	-	962	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_4	496.058464296296	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTCTTGTTTTTCTT	8347	False	NA	14	True	TTTAAA	-12	NA	113746300	113721655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
transcript_68330.known	chr3	-	958	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	588.956439390894	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATCATGTTTGA	-13	True	NA	-33	True	NA	NA	NA	113746249	113721589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
transcript_68332.known	chr3	+	4575	15	FSM	ENSG00000114573.10	ENST00000273398.8	4575	15	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_12	20.581470763177	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTTCTTTTTCTCTT	-16	True	NA	17	True	AATAAA	-18	NA	113747034	113812056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_113747114_113778740_113778836_113781049_113781179_113784223_113784439_113784695_113784834_113786231_113786384_113788712_113788876_113789731_113789841_113794871_113794995_113795089_113795205_113795875_113795940_113798242_113798447_113803582_113803678_113805353_113805526_113809334
transcript_68334.known	chr3	+	3807	18	FSM	ENSG00000178075.20	ENST00000358160.9	3807	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	3.0189711577309	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTAGTTTTTCTTCTTTT	3	True	NA	12	True	AATAAA	-16	NA	113838787	113947174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_113838937_113844502_113844650_113869506_113869592_113875483_113875588_113876164_113876261_113882751_113882833_113901030_113901147_113904139_113904273_113908957_113909121_113915700_113915839_113930713_113930833_113933510_113933654_113934431_113934536_113936265_113936443_113938085_113938144_113939885_113939997_113940239_113940346_113945397
transcript_68335.nic	chr3	+	3934	11	NIC	ENSG00000151576.10	novel	4023	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	85.7373314256981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	10	True	NA	18	True	AATAAA	-20	NA	114056793	114088349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_114056865_114056998_114057107_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114082962_114083004_114085672
transcript_68337.known	chr3	+	4023	10	FSM	ENSG00000151576.10	ENST00000281273.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.8953443011947	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGAGATTTCTCATT	-1	True	NA	91	True	ATTAAA	-19	NA	114056736	114088422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_114056865_114056998_114057107_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_68342.known	chr3	+	3844	9	FSM	ENSG00000151576.10	ENST00000485050.5	3844	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	70.1921469966548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	-3	True	NA	18	True	AATAAA	-20	NA	114056734	114088349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_114056865_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_68346.known	chr3	+	1498	3	FSM	ENSG00000172020.13	ENST00000305124.11	1498	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	24.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAATGGCTCTGTGTTT	-5	True	NA	17	True	AATAAA	-17	NA	115623509	115721483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_115623720_115676012_115676611_115720793
transcript_68348.known	chr3	+	1901	4	FSM	ENSG00000172020.13	ENST00000393780.3	1901	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.8666905958332	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCTGTGTTTCTGTTCT	-5	True	NA	24	True	AATAAA	-24	NA	115623509	115721490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_115623720_115663520_115663917_115676012_115676611_115720793
transcript_68349.known	chr3	-	1131	4	FSM	ENSG00000243276.6	ENST00000657445.1	1131	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77123616632825	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTATATTTATTTCCC	40	False	NA	NA	False	AATAAA	-15	NA	118810757	118507779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_118508693_118662409_118662491_118683686_118683773_118810706
transcript_68350.known	chr3	+	2028	8	FSM	ENSG00000114638.8	ENST00000264234.8	2028	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.35606035749581	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTCATTTTTACCAA	12	True	NA	9	True	AGTAAA	-18	NA	119173597	119205143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119173639_119186713_119186811_119187774_119187976_119190244_119190320_119190981_119191105_119194218_119194399_119199056_119199141_119203916
transcript_6836.known	chr1	+	801	2	FSM	ENSG00000159352.16	ENST00000461434.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	2225	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTAGGAACTGATAAT	6	True	NA	NA	False	NA	NA	NA	151254757	151262910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151254809_151262160
transcript_68367.known	chr3	-	2234	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	56.6352453901999	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-1	True	NA	-18	True	AATAAA	-41	NA	119240878	119211741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_68368.known	chr3	-	2385	9	FSM	ENSG00000121578.13	ENST00000359213.7	2385	9	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_6	101.969358142532	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-18	True	AATAAA	-41	NA	119240946	119211741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_68369.known	chr3	-	2494	8	FSM	ENSG00000121578.13	ENST00000483209.5	2494	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	108.950653499459	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	263	False	NA	-8	True	AGTAAA	-23	NA	119240639	119211731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240360
transcript_6837.known	chr1	+	4795	9	FSM	ENSG00000143373.18	ENST00000336715.11	4795	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	10.552695153372	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGAGCTCTTTTCCCTGG	12	True	NA	1	True	AATAAA	-4	NA	151282298	151292176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151282396_151286274_151288407_151288527_151288707_151289094_151289272_151289377_151289541_151289677_151290008_151290121_151290235_151290431_151290574_151290714
transcript_68370.known	chr3	-	2107	7	FSM	ENSG00000121578.13	ENST00000480814.5	2107	7	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	102.604418358405	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATCAAATACCTCTGTA	3831	False	NA	-55	True	AATAAA	-4	NA	119237071	119211778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852
transcript_68371.known	chr3	-	624	2	FSM	ENSG00000241155.1	ENST00000466292.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCACCCTGGAGGATG	370	False	NA	NA	False	NA	NA	NA	119322760	119314292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119314770_119322613
transcript_6838.known	chr1	-	637	2	FSM	ENSG00000232671.7	ENST00000660511.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAACACGCTTTGTAAAG	439	False	NA	-6	True	ATTAAA	-12	NA	151281950	151280029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151280259_151281542
transcript_68381.known	chr3	-	4853	9	FSM	ENSG00000176142.13	ENST00000319172.10	4853	9	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_1	29.5209141965489	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATGTCTTGGAAC	13	True	NA	NA	False	AATAAA	-29	NA	119463615	119428948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_684.known	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	118.354383104302	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	445	False	10472552	-14	True	AATAAA	-33	NA	10472529	10456521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_6840.known	chr1	-	307	2	FSM	ENSG00000232671.7	ENST00000494138.5	397	2	90	0	49	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTTTGTAAAGTAATTG	509	False	NA	0	True	ATTAAA	-18	NA	151281880	151280023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151280259_151281808
transcript_68400.nnic	chr3	-	1878	8	NIC	ENSG00000176142.13	novel	4853	9	NA	NA	0	-2232	intron_retention	FALSE	canonical	2	14	junction_6	58.494723292458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTGGAATAACTCATT	-18	True	NA	-28	True	AGTAAA	-19	NA	119463646	119431731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119461961_119462149_119463335
transcript_68409.known	chr3	+	2888	12	FSM	ENSG00000163389.12	ENST00000647766.1	2888	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	54.1560341333988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTAGCAATGCACAGGG	-1	True	NA	NA	False	TTTAAA	-29	NA	119468983	119493825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119478333_119478475_119479907_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_6841.nic	chr1	-	3661	11	NIC	ENSG00000143390.18	novel	3570	11	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_9	106.940918267986	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTTCCTCCCT	379	False	NA	-20	True	ATTAAA	-16	NA	151346887	151340639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151346754
transcript_68415.nnic	chr3	+	1386	11	NNC	ENSG00000163389.12	novel	3508	11	NA	NA	3	-386	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_10	37.2055103445713	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTAAGTTGTATTGCT	2	True	NA	NA	False	AATAAA	-28	NA	119468986	119492091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119491762
transcript_68416.known	chr3	+	3508	11	FSM	ENSG00000163389.12	ENST00000295588.9	3508	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	14.7787008901324	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTGTCTTTATTTA	-22	True	NA	NA	False	AATGAA	-24	NA	119468962	119494708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_6842.known	chr1	-	2459	11	FSM	ENSG00000143390.18	ENST00000368870.6	2459	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	99.4034204642878	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCATGTAACTAGAAAG	NA	False	NA	-14	True	AATAAA	-11	NA	151347326	151341828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151347210
transcript_68423.known	chr3	+	2379	7	FSM	ENSG00000113845.10	ENST00000494664.6	2379	7	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	34.322004603461	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGTCAGAGGAAATTAG	-5	True	NA	NA	False	NA	NA	NA	119498546	119525090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_68426.nic	chr3	+	1362	7	NIC	ENSG00000113845.10	novel	2379	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	204.616443349231	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	-2	True	NA	9	True	AATAAA	-16	NA	119498549	119524061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_119498943_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_68428.known	chr3	+	1271	6	FSM	ENSG00000113845.10	ENST00000264244.7	1271	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	206.486222300666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	0	True	NA	14	True	AATAAA	-21	NA	119498551	119524066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119517204_119517316_119523605
transcript_68433.nic	chr3	+	1056	4	NIC	ENSG00000113845.10	novel	725	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	263.789478351372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	4692	False	NA	9	True	AATAAA	-16	NA	119498517	119524061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_119498928_119513640_119513720_119517204_119517316_119523605
transcript_68434.nic	chr3	+	1142	4	NIC	ENSG00000113845.10	novel	1271	6	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	237.361889667795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	4693	False	NA	9	True	AATAAA	-16	NA	119498518	119524061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_119498928_119500694_119500861_119517204_119517316_119523605
transcript_68435.known	chr3	+	684	3	FSM	ENSG00000113845.10	ENST00000498399.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	272	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	166	False	NA	9	True	AATAAA	-16	NA	119498816	119524061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119498934_119517204_119517316_119523605
transcript_68436.known	chr3	+	1501	4	FSM	ENSG00000144843.12	ENST00000478927.5	1501	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACCTTAAGCTCAGTTT	-5	True	NA	NA	False	NA	NA	NA	119579589	119588007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119579852_119582133_119582468_119586284_119586646_119587463
transcript_68437.known	chr3	+	1743	11	FSM	ENSG00000144837.9	ENST00000273371.9	1743	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	3.55668384875575	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAATTGTTTTACTTG	1	True	NA	9	True	AATAAA	-20	NA	119597884	119629811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119597987_119606773_119606976_119608769_119608948_119609467_119609577_119613016_119613119_119616011_119616102_119618018_119618187_119619562_119619653_119625123_119625233_119628700_119628866_119629383
transcript_6844.nic	chr1	-	2341	11	NIC	ENSG00000143390.18	novel	3570	11	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_9	106.940918267986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATTCCCTGTGCTATC	379	False	NA	-7	True	AATAAA	-16	NA	151346887	151341959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151346754
transcript_68440.known	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1109.2148374213	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	54	False	NA	-10	True	AGTAAA	-16	NA	119677346	119669531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
transcript_68441.known	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2419	junction_1	339	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-6	True	NA	-10	True	AGTAAA	-16	NA	119677406	119669531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119669666_119675144_119675234_119677203
transcript_68442.known	chr3	-	660	3	FSM	ENSG00000138495.7	ENST00000497116.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATGTCAAAAATGCAA	36	False	NA	NA	False	AATAAA	-42	NA	119677364	119674378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119674789_119675144_119675234_119677203
transcript_68446.known	chr3	+	939	6	FSM	ENSG00000183833.16	ENST00000463700.1	939	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.07245829914744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	-26	True	NA	13	True	AATAAA	-22	NA	119703032	119715934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_68449.known	chr3	+	1865	13	FSM	ENSG00000183833.16	ENST00000468630.5	1865	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	10.9911580625317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCCCACAATCCCATCAC	-37	True	NA	NA	False	AATAAA	-26	NA	119703021	119740803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561_119715744_119726170_119726349_119730219_119730378_119732293_119732477_119733363_119733507_119737365_119737483_119739254_119739327_119740548
transcript_68450.known	chr3	-	7000	12	FSM	ENSG00000082701.17	ENST00000316626.6	7000	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	44.7424216769797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGTGGTCCTCTTAT	2041	False	NA	NA	False	AATAAA	-17	NA	120093666	119821321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119866589_119866629_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_68452.known	chr3	-	7743	11	FSM	ENSG00000082701.17	ENST00000264235.13	7743	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	11.0765518100174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTGGTCCTCTTATT	-2	True	NA	NA	False	AATAAA	-18	NA	120094447	119821320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_68453.known	chr3	+	982	2	FSM	ENSG00000242622.3	ENST00000469070.1	982	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTGCCCAAATGGG	14	True	NA	NA	False	NA	NA	NA	120095269	120099186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120095779_120098713
transcript_68454.known	chr3	-	5682	11	FSM	ENSG00000163430.12	ENST00000295633.8	5682	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_5	153.621482872676	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTTGTCATTTTCTT	0	True	NA	NA	False	ATTAAA	-18	NA	120450992	120392292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_68459.known	chr3	-	540	3	FSM	ENSG00000163430.12	ENST00000472536.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTTATAAGCTTCCT	0	True	NA	-7	True	ATTAAA	-15	NA	120450992	120421171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120421553_120450683_120450747_120450896
transcript_68460.known	chr3	-	677	3	FSM	ENSG00000163430.12	ENST00000485968.5	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1002.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGATGAATCCCTGA	264	False	NA	NA	False	NA	NA	NA	120450960	120423526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120424077_120450683_120450747_120450896
transcript_68467.known	chr3	+	558	3	FSM	ENSG00000065518.8	ENST00000491335.1	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1824.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	22	False	NA	27	True	AATAAA	-19	NA	120596356	120602328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120596647_120601110_120601258_120602207
transcript_68469.known	chr3	+	309	2	FSM	ENSG00000065518.8	ENST00000492739.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTAGTAGTTTCTCTT	12	True	NA	22	True	AATAAA	-14	NA	120596346	120602323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120596540_120602207
transcript_68470.known	chr3	-	1007	9	FSM	ENSG00000144840.10	ENST00000491398.5	1007	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	78.4624711247358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGGAAAAATGAAAGG	3	True	NA	NA	False	NA	NA	NA	120742533	120689693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738526_120738668_120742461
transcript_68472.known	chr3	-	5605	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	10.4744587313276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTAGCTGTGTAAG	0	True	NA	NA	False	ATTAAA	-30	NA	120742516	120684937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_68479.known	chr3	-	760	7	FSM	ENSG00000144840.10	ENST00000483733.1	760	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	61.9076372958584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCCTTCAGCCTTACC	-4	True	NA	NA	False	NA	NA	NA	120742520	120689714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120689889_120690448_120690488_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_68480.nnic	chr3	-	3281	7	NIC	ENSG00000144840.10	novel	5605	8	NA	NA	0	-526	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	64.9375768633916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGGTGTCTGACCAATTT	-4	True	NA	-1	True	AATAAA	-22	NA	120742520	120687226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_120689889_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_68484.known	chr3	+	3000	5	FSM	ENSG00000153767.10	ENST00000283875.6	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	9.5524865872714	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	4	True	NA	22	True	AATAAA	-16	NA	120742743	120783069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120742795_120750522_120751001_120770727_120770930_120776422_120776665_120781042
transcript_68487.known	chr3	+	567	2	FSM	ENSG00000153767.10	ENST00000497393.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGATTCATCTAATTT	1	True	NA	NA	False	AATAAA	-21	NA	120742761	120751056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_120742795_120750522
transcript_68488.known	chr3	-	3960	9	FSM	ENSG00000144840.10	ENST00000648525.1	3960	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	78.0311436222743	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGCTTTTCTCAATAA	0	True	NA	NA	False	AATAAA	-2	NA	120742516	120686700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738549_120738668_120742461
transcript_68490.nnic	chr3	+	666	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-14	-128801	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	8.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCGACATCTTATTTG	-31	True	NA	NA	False	AATAAA	-25	NA	120908190	120916645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_68496.nic	chr3	-	1894	3	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-19	108628	-19	-2959	5prime_fragment	FALSE	canonical	3	41	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTAAAGTCCCACTG	-1	True	NA	NA	False	ACTAAA	-11	NA	121546007	121540058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_121541480_121544726_121544907_121545714
transcript_68497.known	chr3	-	8757	30	FSM	ENSG00000051341.15	ENST00000264233.6	8757	30	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	14.4691233021212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATATCAACAATTGTTT	-6	True	NA	-12	True	AATAAA	-17	NA	121545988	121431430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
transcript_68498.known	chr3	-	1992	14	FSM	ENSG00000180353.11	ENST00000314583.8	1992	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.44526087331672	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGGTAAATAGTACTT	5	True	NA	0	True	AATAAA	-23	NA	121660903	121631398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121637145_121637257_121642926_121642982_121644817_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
transcript_685.known	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	55.599010782567	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	17	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_6850.known	chr1	+	618	2	FSM	ENSG00000237976.2	ENST00000455503.2	647	2	29	0	29	0	multi-exon	FALSE	canonical	3	134	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGAACATTGTACTGA	15	True	NA	NA	False	NA	NA	NA	151346966	151348027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151347189_151347631
transcript_68502.nic	chr3	-	3245	13	ISM	ENSG00000173230.16	ENST00000393667.7	11198	22	-5	34191	-4	-367	5prime_fragment	FALSE	canonical	3	51	junction_7	13.549036456106	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGATAAAGAAAACAAAGA	-17	True	NA	NA	False	AAGAAA	-40	NA	121749745	121697393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_68507.nic	chr3	-	1153	6	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-101	26417	-12	7233	5prime_fragment	FALSE	canonical	3	78	junction_3	4.19523539268061	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAAATAATTAGGTT	-5	True	NA	NA	False	AGTAAA	-7	NA	121749767	121721894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_6851.nnic	chr1	-	1689	12	NNC	ENSG00000143416.21	novel	1722	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	91.5036015187877	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-2	True	NA	-40	True	AATAAA	-20	NA	151372705	151364303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369157_151369441_151369555_151369712_151369770_151372637
transcript_68510.nic	chr3	-	548	5	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-75	31530	0	2120	5prime_fragment	FALSE	canonical	3	78	junction_2	4.69041575982343	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAGATAAAACATAAG	-13	True	NA	NA	False	NA	NA	NA	121749741	121727007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_68512.nic	chr3	-	564	4	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-250	33835	-161	-185	5prime_fragment	FALSE	canonical	3	78	junction_1	5.24933858267454	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAACTAAAACTTCAT	38	False	NA	NA	False	NA	NA	NA	121749916	121729312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_121729341_121729864_121730018_121730875_121730974_121749631
transcript_68514.known	chr3	-	2577	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_14	24.9813195514291	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTTTCCCTTTTTGT	-28	True	NA	-3	True	ATTAAA	-18	NA	121835060	121769760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_68520.nic	chr3	-	2227	14	NIC	ENSG00000173226.17	novel	2577	15	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	72.6367308911697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	NA	False	NA	0	True	AATAAA	-26	NA	121835106	121769993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828860_121828973_121834390_121834480_121834965
transcript_68521.nnic	chr3	-	2233	14	NIC	ENSG00000173226.17	novel	2577	15	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	72.3958546003403	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	NA	False	NA	0	True	AATAAA	-26	NA	121835106	121769993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_121770575_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_68527.known	chr3	-	1919	12	FSM	ENSG00000173226.17	ENST00000349820.10	1919	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	78.9880208513704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-2	True	NA	0	True	AATAAA	-26	NA	121835034	121769993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_6853.known	chr1	-	1722	12	FSM	ENSG00000143416.21	ENST00000368868.10	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	73.4852546068128	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-2	True	NA	-40	True	AATAAA	-20	NA	151372705	151364303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369190_151369441_151369555_151369712_151369770_151372637
transcript_68532.known	chr3	+	998	6	FSM	ENSG00000145088.9	ENST00000273668.7	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	17.3366663462155	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTATGTATTTGTT	-13	True	NA	9	True	ATTAAA	-19	NA	121835208	121886526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_121835392_121844452_121844548_121854686_121854824_121857010_121857157_121872536_121872789_121886341
transcript_68534.known	chr3	+	829	5	FSM	ENSG00000145088.9	ENST00000490434.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	37.8310388437854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATATGTCTTAACTTT	-3	True	NA	-49	True	AATAAA	-16	NA	121835182	121886468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_121835392_121844452_121844548_121857010_121857157_121872536_121872789_121886341
transcript_68540.nnic	chr3	-	760	6	NNC	ENSG00000160124.9	novel	720	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	451.035253611068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	5	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122372982_122373023_122383173
transcript_68542.known	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	409.434594898868	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	9	True	NA	55	True	NA	NA	NA	122383227	122359787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
transcript_68543.known	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	100.469833781091	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	5	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
transcript_68545.nic	chr3	-	605	5	NIC	ENSG00000160124.9	novel	720	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	357.404882451261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGTAACTATTAAAATA	-10	True	NA	NA	False	NA	NA	NA	122383246	122359628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122359828_122362967_122363028_122368175_122368323_122371674_122371801_122383173
transcript_68547.nnic	chr3	-	675	4	NIC	ENSG00000160124.9	novel	720	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	434.568240389879	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	-10	True	NA	NA	False	ATTAAA	-22	NA	122383246	122359590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122359920_122368175_122368323_122371674_122371801_122383173
transcript_68548.known	chr3	-	438	3	FSM	ENSG00000160124.9	ENST00000497726.5	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	368.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGTACATATTTATTT	5	True	NA	NA	False	ATTAAA	-13	NA	122383231	122359599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122359920_122362967_122363028_122383173
transcript_68549.known	chr3	+	801	6	FSM	ENSG00000114023.16	ENST00000232125.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	618.965911823906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATAAAGTATGATTT	-29	True	NA	-12	True	ATTAAA	-21	NA	122384175	122409917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122384300_122401375_122401536_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_6855.known	chr1	-	1922	11	FSM	ENSG00000143416.21	ENST00000463664.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	75.4035145069512	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAGGCACCAAGAAATA	9	False	NA	-81	True	NA	NA	NA	151372694	151364344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
transcript_68550.known	chr3	+	3052	5	FSM	ENSG00000114023.16	ENST00000477892.5	3052	5	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	28.8920404263873	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTACTTTTTATTTTTAA	-23	True	NA	34	True	AATAAA	-18	NA	122384181	122412334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122384300_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_68551.known	chr3	+	1015	4	FSM	ENSG00000114023.16	ENST00000469967.1	1015	4	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	32.6190128606002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCTCACAAAAACACTGTA	-7	True	NA	NA	False	NA	NA	NA	122384197	122407964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122384300_122402759_122402883_122404257_122404364_122407280
transcript_68553.known	chr3	-	1923	15	FSM	ENSG00000114030.13	ENST00000494339.5	1923	15	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_10	102.913402272721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATACTCTGCTTTCACG	-21	True	NA	NA	False	NA	NA	NA	122514934	122426984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122457725_122457849_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_68555.known	chr3	-	6888	14	FSM	ENSG00000114030.13	ENST00000344337.11	6888	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_4	21.8512995023369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGAATTCCCTTATG	-26	True	NA	40	True	AGTAAA	-21	NA	122514939	122421901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_68557.nic	chr3	-	3024	14	NIC	ENSG00000114030.13	novel	6888	14	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_13	71.9474660417063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGCAATCTGTA	NA	False	NA	-25	True	AATAAA	-27	NA	122514971	122425679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_6856.known	chr1	-	1530	11	FSM	ENSG00000143416.21	ENST00000447402.7	1530	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	73.4495745392715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTTGTCTTTGGGG	3	True	NA	-41	True	AATAAA	-19	NA	151372700	151364304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369441_151369555_151369712_151369770_151372637
transcript_68565.nnic	chr3	+	1046	3	NNC	ENSG00000272758.7	novel	575	3	NA	NA	-3	-26	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATTGGAAATTCCATA	NA	False	NA	11	True	AATAAA	-26	NA	122416196	122427214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_122416251_122425606_122425659_122426274
transcript_68566.known	chr3	+	453	2	FSM	ENSG00000272758.7	ENST00000667395.2	463	2	8	2	6	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCCATCAGCTTTTTTT	-3	True	NA	NA	False	AATAAA	-21	NA	122416212	122421400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122416251_122420985
transcript_68568.known	chr3	+	1271	2	FSM	ENSG00000287207.1	ENST00000659697.1	1271	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTGAGATATTTTTAT	19	False	NA	NA	False	AATAAA	-31	NA	122515005	122518172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_122515129_122517024
transcript_68569.known	chr3	-	3040	11	FSM	ENSG00000138496.17	ENST00000471785.5	3040	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	7.80768851837725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGAATGATTTTAGA	-2	True	NA	-81	True	TATAAA	-9	NA	122564242	122528004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564110
transcript_6857.known	chr1	-	2128	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.4552440212044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGATGGCCTTGTCTTT	-3	True	NA	-45	True	AATAAA	-15	NA	151372706	151364308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_68570.known	chr3	-	3045	11	FSM	ENSG00000138496.17	ENST00000682323.1	3045	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_10	6.8818602136341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	-21	True	NA	0	True	AATAAA	-19	NA	122564300	122527923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564244
transcript_68573.known	chr3	-	6769	10	FSM	ENSG00000138496.17	ENST00000462315.5	6769	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.62711213410245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGAATCCTTCTGGT	466	False	NA	-8	True	AATAAA	-21	NA	122564315	122531772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564110
transcript_68579.known	chr3	-	1964	8	FSM	ENSG00000169087.11	ENST00000306103.3	1964	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	7.70369643583586	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCCATTCATTTACAT	-24	True	NA	-18	True	AATAAA	-17	NA	122793831	122739998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_6858.nnic	chr1	-	1424	10	NIC	ENSG00000143416.21	novel	1722	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_8	61.7485942260137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-3	True	NA	-40	True	AATAAA	-20	NA	151372706	151364303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369712_151369770_151372637
transcript_68582.nnic	chr3	-	1743	7	NIC	ENSG00000169087.11	novel	1964	8	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	21.0396451174127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCATGCCATTCATTT	7	True	NA	-22	True	AATAAA	-13	NA	122793800	122740002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122793616
transcript_68587.known	chr3	-	2986	6	FSM	ENSG00000169087.11	ENST00000465044.5	2986	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.2910241654651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAGGAATAAAAGG	-8	True	NA	NA	False	AATAGA	-40	NA	122793714	122752860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122755072_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_68588.nic	chr3	-	3333	5	ISM	ENSG00000169087.11	ENST00000306103.3	1964	8	-16	12836	-16	26	5prime_fragment	FALSE	canonical	3	59	junction_2	7.29297607290741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGCGGGGTTTTTTTTC	292	False	NA	NA	False	AATAAA	-21	NA	122793847	122752834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_68593.nic	chr3	-	1631	5	ISM	ENSG00000082684.16	ENST00000451055.6	4579	23	63841	1	-26	0	3prime_fragment	FALSE	canonical	3	113	junction_4	13.5531361684298	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTCTCTGTGCATCTG	NA	False	NA	-8	True	ATTAAA	-17	NA	122912293	122909193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171
transcript_68594.known	chr3	-	1542	5	FSM	ENSG00000082684.16	ENST00000451541.5	1542	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	55.9352304008842	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTCTCTGTGCATCTG	NA	False	NA	-8	True	ATTAAA	-17	NA	122912267	122909193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912234
transcript_68597.known	chr3	+	1844	17	FSM	ENSG00000065485.20	ENST00000316218.12	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_12	35.5518437461406	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-1	True	NA	13	True	AATAAA	-14	NA	123067024	123162104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_68599.known	chr3	+	1651	16	FSM	ENSG00000065485.20	ENST00000489923.5	1651	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	129.08006128842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-40	True	NA	13	True	AATAAA	-14	NA	123067061	123162104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123145521_123145593_123146117_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_68603.known	chr3	+	1011	8	FSM	ENSG00000121542.12	ENST00000473494.6	1011	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.9178101365827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTACAGATCTGGCTAA	15	True	NA	NA	False	NA	NA	NA	123201958	123271664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123201987_123204715_123204814_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_68604.known	chr3	+	3401	7	FSM	ENSG00000121542.12	ENST00000492595.6	3401	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	22.1484887871736	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTCATTATTTGG	-1	True	NA	8	True	TATAAA	-18	NA	123201942	123274136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_68609.nic	chr3	+	1532	7	NIC	ENSG00000121542.12	novel	4228	6	NA	NA	-9	264	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	50.3733284806774	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATTATTTGCACACTT	53	False	NA	7	True	AATAAA	-15	NA	123201996	123272173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_123202135_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_6861.nnic	chr1	-	1245	9	NIC	ENSG00000143416.21	novel	1722	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	93.4317933039926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-3	True	NA	-40	True	AATAAA	-20	NA	151372706	151364303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366721_151366905_151368198_151368320_151369712_151369770_151372637
transcript_68611.nnic	chr3	+	1237	6	NIC	ENSG00000121542.12	novel	3401	7	NA	NA	0	264	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	54.8561755867104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATTATTTGCACACTT	-1	True	NA	7	True	AATAAA	-15	NA	123201942	123272173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_123201987_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_68612.nnic	chr3	+	1639	6	NIC	ENSG00000121542.12	novel	3401	7	NA	NA	0	666	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	54.8561755867104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGTAAGATGAACACAAAA	-1	True	NA	NA	False	AATAAA	-15	NA	123201942	123272575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_123201987_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_68617.nnic	chr3	-	2275	11	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3434	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	21.2602916254693	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123314718	123283943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123314539
transcript_68619.nic	chr3	-	2346	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101770	-634	3580	0	3prime_fragment	FALSE	canonical	3	58	junction_8	13.9133118599987	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-7	True	NA	-29	True	AATAAA	-8	NA	123314572	123283943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_68620.nnic	chr3	-	2268	10	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3324	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_9	26.4868940337586	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123314828	123283943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234_123314323_123314539
transcript_68622.nnic	chr3	-	2229	9	NIC	ENSG00000173175.15	novel	3962	23	NA	NA	3580	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	21.8771427521969	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-7	True	NA	-29	True	AATAAA	-8	NA	123314572	123283943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_68627.known	chr3	-	4125	7	FSM	ENSG00000206527.10	ENST00000383657.10	4125	7	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	28.4355997533608	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCAGTGAGTGCAGT	-11	True	NA	-9	True	AATAAA	-29	NA	123585053	123491553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
transcript_68631.known	chr3	+	760	3	FSM	ENSG00000239523.7	ENST00000470449.2	779	3	10	9	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	10	True	NA	NA	False	AATAAA	-31	NA	123585555	123630821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123585802_123629493_123629682_123630495
transcript_68632.nic	chr3	+	737	3	FSM	ENSG00000239523.7	ENST00000691647.1	773	3	36	0	8	0	multi-exon	FALSE	canonical	2	2	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	26	True	NA	NA	False	AATAAA	-31	NA	123585571	123630821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_123585795_123629493_123629682_123630495
transcript_68635.known	chr3	-	4131	13	FSM	ENSG00000175455.16	ENST00000409697.8	4131	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_9	49.2456991917963	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTGTCTACTCC	3	True	NA	NA	False	AATAAA	-23	NA	123961229	123913421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_68642.known	chr3	+	2242	7	FSM	ENSG00000114491.14	ENST00000467167.5	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	206.623987528608	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	-3	True	NA	NA	False	NA	NA	NA	124730444	124744757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124731505_124731605_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_68644.known	chr3	+	6652	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_4	26.9547769421303	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	4	True	NA	30	True	AATAGA	-18	NA	124730451	124749273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_68645.known	chr3	+	2340	6	FSM	ENSG00000114491.14	ENST00000479719.5	2340	6	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	184.470051769928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	4	True	NA	NA	False	NA	NA	NA	124730451	124744757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124735092_124735247_124737567_124738444_124740023_124740200_124742151_124742267_124743914
transcript_68647.known	chr3	+	2001	5	FSM	ENSG00000114491.14	ENST00000462091.5	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	182.790864104309	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	-15	True	NA	NA	False	NA	NA	NA	124730432	124744757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_124730628_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_68648.known	chr3	-	4440	15	FSM	ENSG00000082781.12	ENST00000296181.9	4440	15	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_14	143.685171717295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTCTCTCATGTT	0	True	NA	NA	False	AATAAA	-18	NA	124887365	124761947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124886930
transcript_68649.nic	chr3	-	2865	15	NIC	ENSG00000082781.12	novel	4440	15	NA	NA	10	-215	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	362.482434479414	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTCCTGAGACTTT	-2	True	NA	-6	True	AATAAA	-23	NA	124887674	124763162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124887599
transcript_6865.known	chr1	+	918	7	FSM	ENSG00000159377.11	ENST00000290541.7	918	7	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_6	93.8499097258786	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	4	True	NA	14	True	AATAAA	-14	NA	151399572	151401937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151399728_151399980_151400188_151400441_151400589_151400763_151400846_151401238_151401356_151401541_151401631_151401816
transcript_68651.known	chr3	-	3485	14	FSM	ENSG00000221955.11	ENST00000469902.6	3485	14	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_13	20.8417537223923	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTAATGGTGACTCATA	0	True	NA	-8	True	ATTAAA	-14	NA	125212748	125082643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125211298_125211395_125212699
transcript_68652.known	chr3	-	2960	10	FSM	ENSG00000163848.20	ENST00000485866.5	2960	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	32.4417807125699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAATAATACTGGCACT	6	True	NA	NA	False	NA	NA	NA	125375313	125232327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125314936_125315054_125323308_125323445_125331157_125331239_125375101
transcript_68654.known	chr3	-	9514	9	FSM	ENSG00000163848.20	ENST00000360647.9	9514	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	11.4318633651737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTGTCATTGAGT	-6	True	NA	-2	True	AATAAA	-19	NA	125375325	125225668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
transcript_68656.known	chr3	-	2952	9	FSM	ENSG00000163848.20	ENST00000484491.5	2952	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	24.8596057893121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAC	70	False	NA	2	True	NA	NA	NA	125375249	125232075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323387_125323445_125331157_125331239_125375101
transcript_68663.nic	chr3	-	1716	3	ISM	ENSG00000163848.20	ENST00000485866.5	2960	10	-12	89706	0	-8470	5prime_fragment	FALSE	canonical	3	76	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCGTTGATTATTT	-6	True	NA	NA	False	NA	NA	NA	125375325	125322033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_125323445_125331157_125331239_125375101
transcript_68667.known	chr3	-	2512	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_10	17.9631443854637	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-14	True	NA	-10	True	AATAAA	-21	NA	125520202	125446649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_68670.known	chr3	-	1308	13	FSM	ENSG00000114520.11	ENST00000471751.5	1308	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	74.6368988280372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCACTACCTAGTATAC	7	True	NA	-67	True	AATAAA	-8	NA	125520181	125447710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125520031
transcript_68674.known	chr3	-	4598	13	FSM	ENSG00000144909.8	ENST00000296220.6	4598	13	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_6	14.5945195193264	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTCTGTCTCTTTTA	35	True	NA	NA	False	AATAAA	-17	NA	125595497	125528857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125530581_125531860_125532015_125538450_125538634_125547405_125547593_125552180_125552680_125560378_125560520_125563697_125563844_125567393_125567596_125576188_125576366_125578959_125579040_125579864_125580041_125582909_125582979_125594636
transcript_68688.nnic	chr3	+	648	2	NNC	ENSG00000284624.1	novel	1151	2	NA	NA	-44	-67999	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	NA	False	NA	-17	True	AATAAA	-19	NA	125766471	125773291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_125766819_125772990
transcript_68689.known	chr3	+	1151	2	FSM	ENSG00000284624.1	ENST00000641586.1	1151	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGCAGTTCCCAGC	NA	False	NA	NA	False	AATAGA	-15	NA	125766647	125841290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_125766819_125840310
transcript_68691.known	chr3	-	805	6	FSM	ENSG00000189366.11	ENST00000340333.7	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.61109401705356	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	25	False	NA	-3	True	AATGAA	-18	NA	125937039	125929274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_125929568_125930556_125930630_125931637_125931753_125932649_125932710_125933574_125933697_125936897
transcript_68693.known	chr3	+	1910	5	FSM	ENSG00000171084.16	ENST00000467239.5	1910	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.54835134966506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	125916619	125930010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_68694.nnic	chr3	-	760	5	NIC	ENSG00000189366.11	novel	805	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	10.6389614154766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTTGGCTCTGATTT	13	False	NA	0	True	AATGAA	-21	NA	125937051	125929271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_125929568_125930556_125930630_125931637_125931753_125933574_125933697_125936897
transcript_68695.known	chr3	+	2012	5	FSM	ENSG00000171084.16	ENST00000485843.2	2027	5	15	0	5	0	multi-exon	FALSE	canonical	3	7	junction_1	5.22015325445528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	NA	False	NA	NA	False	AATAAA	-31	NA	125916629	125930024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_125916818_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_68698.known	chr3	-	1797	12	FSM	ENSG00000114544.17	ENST00000315891.10	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	21.7057710267977	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTACTTGACCCT	-8	True	NA	-45	True	AATAAA	-5	NA	126084304	126006372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_687.nic	chr1	-	1679	3	ISM	ENSG00000130940.15	ENST00000344008.5	4405	16	146739	0	1189	0	3prime_fragment	FALSE	canonical	3	14	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCCTGAGTGGCAGCTG	NA	False	NA	-9	True	AATAAA	-22	NA	10649911	10647212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_10648140_10649069_10649193_10649282
transcript_68700.known	chr3	-	1705	11	FSM	ENSG00000114544.17	ENST00000346785.9	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	29.0489242485845	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-8	True	NA	-29	True	AATAAA	-21	NA	126084304	126006356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
transcript_68703.known	chr3	-	2182	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	13.8982013224734	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	7	True	NA	-29	True	AATAAA	-21	NA	126084124	126006356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_68704.nic	chr3	-	2111	10	NIC	ENSG00000114544.17	novel	2182	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	6	junction_8	25.4636026855666	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGACCCTTTATGTCTTT	129	False	NA	-35	True	AATAAA	-15	NA	126084167	126006362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
transcript_68714.known	chr3	+	1000	8	FSM	ENSG00000159685.11	ENST00000290913.8	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	28.8825913247522	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCCTACTCTGC	-2	True	NA	36	True	AATAAA	-42	NA	126704239	126960420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957415_126957552_126960195
transcript_68719.nic	chr3	+	1156	5	ISM	ENSG00000159685.11	ENST00000514908.5	713	7	-51	81902	-48	-81902	5prime_fragment	FALSE	canonical	3	356	junction_4	35.1034186369362	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCTACCACGACTCTTG	NA	False	NA	NA	False	TTTAAA	-36	NA	126704191	126853270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646
transcript_6872.known	chr1	+	986	3	FSM	ENSG00000159377.11	ENST00000495288.5	986	3	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_2	18.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGGACACCCTAGAACT	-9	True	NA	NA	False	NA	NA	NA	151399559	151401052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151399728_151399980_151400188_151400441
transcript_68723.known	chr3	-	1085	3	FSM	ENSG00000239620.3	ENST00000465482.3	1085	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTTAATGTGCTTATA	-1	False	NA	NA	False	AATAAA	-16	NA	127288046	127283782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_127284641_127287313_127287373_127287878
transcript_68729.nnic	chr3	-	1952	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	77.9316292847468	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	NA	False	NA	-19	True	AATAAA	-18	NA	127598281	127573068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
transcript_6873.known	chr1	+	665	3	FSM	ENSG00000159377.11	ENST00000466425.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_2	115	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	1332	False	NA	14	True	AATAAA	-14	NA	151400900	151401937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151401356_151401541_151401631_151401816
transcript_68731.known	chr3	-	3752	11	FSM	ENSG00000163870.16	ENST00000355552.8	3752	11	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_10	27.8251684631019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTAAGTATGCATGCA	-9	True	NA	NA	False	AATAAA	-43	NA	127590733	127571231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
transcript_68732.nic	chr3	-	1820	11	NIC	ENSG00000163870.16	novel	1903	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	67.0340212131124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	7118	False	NA	-19	True	AATAAA	-18	NA	127591111	127573068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590882
transcript_68733.nnic	chr3	-	1841	11	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	95.8966109932984	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	NA	False	NA	-19	True	AATAAA	-18	NA	127598281	127573068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
transcript_68737.nnic	chr3	-	992	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	7	-12329	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTCGTGTTGTGTGTCG	NA	False	NA	NA	False	AAAACA	-16	NA	127598260	127592350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127592955_127594799_127594934_127598006
transcript_68738.nnic	chr3	-	965	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	-12329	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	3	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTCGTGTTGTGTGTCG	NA	False	NA	NA	False	AAAACA	-16	NA	127598281	127592350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_127592955_127594799_127594934_127598054
transcript_6874.known	chr1	-	2741	7	FSM	ENSG00000143442.22	ENST00000485040.5	2741	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	13.3510299228187	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGAAAGTAGGCAAAGGA	3	True	NA	NA	False	NA	NA	NA	151459179	151426188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_68741.known	chr3	+	3434	16	FSM	ENSG00000073111.14	ENST00000265056.12	3434	16	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	98.2865651495101	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTATCTGTTGGCTTC	-12	True	NA	16	True	AATAAA	-18	NA	127598410	127622436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_127598473_127599317_127599548_127604607_127604784_127604895_127605157_127606117_127606338_127606609_127606818_127608381_127608517_127608831_127609024_127615861_127615956_127616867_127617119_127617278_127617406_127617968_127618082_127619026_127619279_127620697_127620881_127621072_127621229_127621662
transcript_68743.known	chr3	+	1915	12	FSM	ENSG00000114626.18	ENST00000475042.5	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	7.54490688045325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	-15	True	NA	10	True	AATAAA	-20	NA	127672957	127680920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_68745.known	chr3	+	1962	12	FSM	ENSG00000114626.18	ENST00000232744.13	1962	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	4.05336305629235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCTGGGGTACAG	-21	True	NA	16	True	AATAAA	-26	NA	127672951	127680926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_127673082_127674390_127674454_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_68748.known	chr3	-	4941	8	FSM	ENSG00000074416.16	ENST00000265052.10	4271	8	-670	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88441513689613	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTGTCTGTCCATCA	7	True	NA	2	True	AATAAA	-17	NA	127823185	127689065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_68749.known	chr3	+	3568	12	FSM	ENSG00000058262.10	ENST00000243253.8	3568	12	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_7	63.4662661746282	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCATGTTCTCTTGAT	5	True	NA	25	True	AATAAA	-20	NA	128052436	128071683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128052560_128052834_128052903_128055515_128055582_128055672_128055752_128056708_128056841_128060101_128060212_128060507_128060662_128064876_128065038_128066953_128067152_128067420_128067613_128067982_128068060_128069475
transcript_6875.known	chr1	+	5101	21	FSM	ENSG00000143375.15	ENST00000271636.12	5101	21	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_11	56.2222375933224	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTGTCTTCTCAT	-1	True	NA	28	True	ATTAAA	-28	NA	151511386	151538692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151511516_151518505_151519393_151520165_151520267_151520413_151520484_151520595_151520692_151523433_151523562_151524225_151524359_151524673_151524887_151525641_151525791_151526974_151527108_151529349_151529560_151529908_151530116_151530488_151530747_151532401_151532573_151533974_151534137_151535041_151535132_151535599_151535684_151535779_151535899_151536236_151536346_151536729_151536894_151537204
transcript_68759.known	chr3	-	1899	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_6	76.4827431516417	1227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTACCTAATGTC	-9	True	NA	NA	False	NA	NA	NA	128123812	128080809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
transcript_6877.known	chr1	+	3033	12	FSM	ENSG00000143367.17	ENST00000368848.6	3033	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	13.7034712378631	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	0	True	NA	27	True	AATAAA	-23	NA	151540307	151583583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151540427_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_68772.known	chr3	-	2284	10	FSM	ENSG00000163902.12	ENST00000296255.8	2284	10	0	0	0	0	multi-exon	FALSE	canonical	3	1550	junction_5	104.562699012082	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGTCTGTTGAAGAT	-1	True	NA	-27	True	AATAAA	-20	NA	128650818	128619968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_128620594_128622163_128622410_128625533_128625654_128625873_128626013_128626732_128626833_128629950_128630144_128631947_128632158_128637798_128638106_128644918_128644984_128650539
transcript_68776.known	chr3	+	1589	6	FSM	ENSG00000075785.14	ENST00000482525.5	1589	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	558.920960422849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGCAATGGATAAAT	16	True	NA	-26	True	AATACA	-3	NA	128726192	128814353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806450_128807542_128807672_128813326
transcript_68777.known	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1172	junction_5	126.604897219657	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	6	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_68780.known	chr3	+	552	3	FSM	ENSG00000075785.14	ENST00000491681.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_2	28	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACATCTTTGTCTCACC	130	False	NA	NA	False	NA	NA	NA	128726351	128798425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128795359_128795421_128797942
transcript_68781.known	chr3	+	1217	6	FSM	ENSG00000075785.14	ENST00000490093.6	1217	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	562.841931629121	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACAGTTAATCTGTGT	-20	True	NA	-9	True	NA	NA	NA	128726156	128813791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806616_128807554_128807672_128813326
transcript_68783.known	chr3	+	2445	18	FSM	ENSG00000177646.20	ENST00000308982.12	2445	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_13	22.4328293781688	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCTGTACTTGTCAC	-10	True	NA	29	True	TATAAA	-24	NA	128879619	128913114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_68786.known	chr3	+	1703	12	FSM	ENSG00000177646.20	ENST00000681552.1	1703	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_11	70.5408855127693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGAAACAGCTTGAAAG	-7	True	NA	-5	True	NA	NA	NA	128879622	128912991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128912506
transcript_68788.known	chr3	-	6034	8	FSM	ENSG00000114656.13	ENST00000265068.9	6034	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	7.29830844253989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	10	True	NA	NA	False	NA	NA	NA	128994115	128966588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128993042_128993337_128993979
transcript_68795.known	chr3	+	2568	18	FSM	ENSG00000177646.20	ENST00000679431.1	2568	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	76.2419659389907	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	13	True	NA	17	True	TATAAA	-12	NA	128879642	128913102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_128880018_128884674_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902633_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_68796.known	chr3	-	1632	7	FSM	ENSG00000114656.13	ENST00000515659.1	1632	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	7.39369100427294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGCTTTTAATAAATG	2296	False	NA	-39	True	ATTAAA	-25	NA	128991897	128970979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128991478
transcript_68797.known	chr3	-	988	11	FSM	ENSG00000240682.10	ENST00000393292.7	988	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	68.0415314348523	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACACAGGCTGGTGCTGC	26	True	NA	NA	False	NA	NA	NA	129161037	129130016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134827_129134955_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_6880.known	chr1	+	6441	12	FSM	ENSG00000143376.14	ENST00000458013.7	6441	12	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_2	13.8223677870208	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGGTTTCCTAGACT	16	True	NA	20	True	AATAAA	-20	NA	151612049	151699080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151694369
transcript_68804.known	chr3	-	4478	3	FSM	ENSG00000172780.17	ENST00000315150.10	4478	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	6	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCGCCCAGGACTGGT	-18	True	NA	NA	False	ATTAAA	-18	NA	129121804	129087571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129091347_129094985_129095170_129121285
transcript_68805.known	chr3	-	335	1	FSM	ENSG00000273437.1	ENST00000609183.1	335	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGGTTGCTGTTCAG	7769	False	NA	-6	True	AATAAA	-16	NA	129163940	129163605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129163600_129163900
transcript_68807.known	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_3	2600.62482876712	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-1	True	NA	-37	True	AATAAA	-27	NA	129183922	129169568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
transcript_68808.known	chr3	-	1516	5	FSM	ENSG00000169714.17	ENST00000500450.6	1516	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2686.89861876104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	11	False	NA	-37	True	AATAAA	-27	NA	129183910	129169568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171654_129171772_129183775
transcript_68809.known	chr3	-	1040	5	FSM	ENSG00000169714.17	ENST00000441626.6	1040	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2735.24828626214	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTATGAACTTCCATA	11	False	NA	NA	False	NA	NA	NA	129183910	129170101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171633_129171772_129183775
transcript_6881.known	chr1	-	2318	14	FSM	ENSG00000182134.17	ENST00000368827.10	2318	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	69.448972370465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCTTTCTGAACTAG	-21	True	NA	NA	False	GATAAA	-15	NA	151790522	151771563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151771987_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_68810.known	chr3	-	1623	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2777.87054233994	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGACAGTTTGGACTT	-5	True	NA	-18	True	ATTAAA	-21	NA	129183899	129169486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
transcript_68825.known	chr3	-	1026	4	FSM	ENSG00000169714.17	ENST00000502372.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	3151	junction_2	1618.51667344585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAAGAACCCCCTTTCC	57	False	NA	20	True	AAAAAG	-40	NA	129183864	129170231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129170571_129171078_129171539_129171633_129171772_129183775
transcript_68832.known	chr3	+	3078	24	FSM	ENSG00000181789.14	ENST00000314797.10	3078	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	128.163161014427	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTACTTCTGCAGAC	-23	True	NA	34	True	AATAAA	-20	NA	129249605	129277773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252695_129252875_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
transcript_68834.known	chr3	-	1030	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACAGGGATAAGATGGT	NA	False	NA	NA	False	AATAAA	-13	NA	129278782	129277752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129277800_129278800
transcript_68836.known	chr3	+	2485	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	214.463477854234	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	22	True	NA	15	True	AATAAA	-15	NA	129278869	129306186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_68843.nic	chr3	+	1666	7	NIC	ENSG00000183624.14	novel	1763	7	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	256.493448042808	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	0	True	NA	13	True	AATAAA	-25	NA	129278902	129305262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_129279044_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_68845.known	chr3	+	1763	7	FSM	ENSG00000183624.14	ENST00000389735.7	1763	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	243.967495558095	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	-8	True	NA	13	True	AATAAA	-25	NA	129278973	129305262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129279212_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_68848.known	chr3	+	1490	6	FSM	ENSG00000183624.14	ENST00000417226.6	1490	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	254.189692946036	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	-2	True	NA	44	True	AATAAA	-15	NA	129278845	129305293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
transcript_68850.known	chr3	+	948	6	FSM	ENSG00000183624.14	ENST00000509042.5	948	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	229.653303917013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTCCTAGAGCAATGG	-20	True	NA	NA	False	NA	NA	NA	129278827	129304751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129278906_129279709_129279916_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_68854.nic	chr3	+	1383	2	ISM	ENSG00000206417.8	ENST00000502789.2	922	5	-1179	5898	-1049	360	5prime_fragment	FALSE	canonical	3	54	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTAGTTCTT	1820	False	NA	32	True	ATTAAA	-21	NA	129317056	129318671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_129318311_129318542
transcript_68855.known	chr3	-	2161	5	FSM	ENSG00000251474.7	ENST00000510078.5	2161	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.2805141726785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGGCTTTAATACACC	25	True	NA	3	True	AATAAA	-26	NA	129399405	129382921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129384219_129393634_129393796_129396216_129396421_129397039_129397141_129399007
transcript_68861.nic	chr3	-	658	3	ISM	ENSG00000251474.7	ENST00000510078.5	2161	5	-48	13388	-14	-92	5prime_fragment	FALSE	canonical	3	29	junction_2	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAGAAAGCACG	-23	True	NA	NA	False	NA	NA	NA	129399453	129396309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_129396421_129397039_129397141_129399007
transcript_68862.known	chr3	-	498	4	FSM	ENSG00000251474.7	ENST00000506593.1	498	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.657891697365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTCTGAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	129399655	129396195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129396421_129397039_129397141_129399380_129399496_129399598
transcript_68863.known	chr3	+	3841	29	FSM	ENSG00000163913.14	ENST00000347300.6	3841	29	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	26.3116137933074	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	1	True	NA	18	True	AATAAA	-18	NA	129440124	129520351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_68868.known	chr3	-	2470	8	FSM	ENSG00000129071.10	ENST00000249910.5	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	73.6937956018285	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGATTCCTCTGGCAT	16	False	NA	NA	False	AATAAA	-23	NA	129440009	129430949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_68869.known	chr3	-	2394	8	FSM	ENSG00000129071.10	ENST00000429544.7	2394	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	34.0072021183509	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTCCTCTGGCATTGT	2	True	NA	NA	False	AATAAA	-26	NA	129439948	129430946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
transcript_6887.known	chr1	-	2792	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_12	28.9888628039574	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	1	True	NA	-15	True	AATAAA	-14	NA	151790500	151773493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_68870.known	chr3	-	2099	8	FSM	ENSG00000129071.10	ENST00000503197.5	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	110.512350404092	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	18	False	NA	0	True	AATAAA	-29	NA	129440007	129431265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_68878.known	chr3	-	2194	7	FSM	ENSG00000129071.10	ENST00000507208.1	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	79.5335359036258	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGGAAGGTTTGGGC	-10	True	NA	NA	False	NA	NA	NA	129440035	129432175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_6888.known	chr1	-	2768	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_12	47.0841445357847	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTCTAAAACCAAAT	-4	True	NA	-19	True	AATAAA	-10	NA	151790505	151773497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_68889.nnic	chr3	-	1714	3	Fusion	ENSG00000172765.18_ENSG00000203644.3	novel	557	4	NA	NA	-3	-18	multi-exon	FALSE	canonical	3	17	junction_1	7	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCATGACCGAGGAGA	147	False	NA	-17	True	AATAAA	-3	NA	129893609	129847065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr3_-_129848413_129880308_129880560_129893493
transcript_68890.known	chr3	+	3556	3	FSM	ENSG00000271270.8	ENST00000605830.6	3556	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCAAAAGTTCTACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	129893810	129908911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_129893928_129901706_129901861_129905626
transcript_68894.known	chr3	+	1466	2	FSM	ENSG00000249846.7	ENST00000658712.1	1466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTGGTATATAGTAAG	1779	False	NA	18	True	AATACA	-16	NA	130112524	130120566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130112745_130119320
transcript_68895.known	chr3	+	1732	3	FSM	ENSG00000249846.7	ENST00000504808.3	1732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAGTGTTATGAACGTT	1782	False	NA	31	True	AATACA	-29	NA	130112527	130120579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130112745_130116836_130117093_130119320
transcript_68896.known	chr3	+	506	1	FSM	ENSG00000228252.9	ENST00000509855.1	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGAGACTGTGTGT	NA	False	NA	7	True	AATAAA	-20	NA	130273300	130273806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130273300_130273800
transcript_68897.known	chr3	-	5016	20	FSM	ENSG00000196455.8	ENST00000356763.8	5016	20	0	0	0	0	multi-exon	TRUE	canonical	3	196	junction_17	31.3046862226949	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCATCCTAAGAGTTT	22	False	130746851	-12	True	ATTAAA	-28	NA	130746829	130678933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_130679486_130680612_130680722_130680976_130681066_130681490_130681592_130684249_130684382_130686210_130686423_130690489_130690655_130703722_130703889_130705560_130705772_130706947_130707136_130708290_130708493_130716395_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
transcript_68899.known	chr3	+	3386	28	FSM	ENSG00000017260.20	ENST00000422190.6	3386	28	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_27	110.634322706691	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	78	False	NA	12	True	ATTAAA	-6	NA	130894640	131016684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
transcript_68900.known	chr3	+	4795	27	FSM	ENSG00000017260.20	ENST00000428331.6	4795	27	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	61.8925510043211	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	-28	True	NA	23	True	AATAAA	-19	NA	130894534	131003150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_68901.known	chr3	+	3484	27	FSM	ENSG00000017260.20	ENST00000328560.12	3484	27	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_26	117.031737211719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	252	False	NA	12	True	ATTAAA	-6	NA	130894447	131016684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131016151
transcript_68902.nnic	chr3	+	1720	3	NNC	ENSG00000246082.3	novel	2243	3	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	72	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	9311	False	NA	16	True	AATAAA	-28	NA	131361810	131364531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_131362069_131362155_131362442_131363355
transcript_68903.known	chr3	+	2208	3	FSM	ENSG00000246082.3	ENST00000499077.3	2243	3	35	0	-32	0	multi-exon	FALSE	canonical	3	68	junction_1	41	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGACCATATAGTAGT	11	True	NA	2	True	AATAAA	-16	NA	131361897	131365122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131362069_131362171_131362442_131363355
transcript_68904.known	chr3	+	1706	2	FSM	ENSG00000246082.3	ENST00000498923.3	1773	2	67	0	-18	0	multi-exon	FALSE	canonical	3	150	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	25	True	NA	16	True	AATAAA	-28	NA	131361911	131364531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131362442_131363355
transcript_68906.known	chr3	+	6108	3	FSM	ENSG00000198585.12	ENST00000521288.2	6108	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	4	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCAGGTTCTCACTTAT	-10	True	NA	25	True	AATAAA	-40	NA	131381773	131388830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131381943_131382045_131382316_131383161
transcript_68908.known	chr3	+	1552	2	FSM	ENSG00000198585.12	ENST00000502852.1	1552	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATGATACCAGATGA	1	True	NA	-11	True	NA	NA	NA	131381784	131383439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_131381943_131382045
transcript_68910.known	chr3	-	1457	11	FSM	ENSG00000114686.9	ENST00000425847.6	1457	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	496.139990325311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATTACCACATTAAA	-15	True	NA	-77	True	ATTAAA	-8	NA	131502983	131462555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502729
transcript_68915.known	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_6	110.49562864936	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-3	True	NA	-12	True	AATAAA	-14	NA	131502971	131462211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
transcript_68917.known	chr3	-	1377	10	FSM	ENSG00000114686.9	ENST00000511168.5	1377	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	403.067895515212	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATCTTAAGATGTCT	-15	True	NA	43	True	NA	NA	NA	131502983	131462435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502848
transcript_68943.known	chr3	-	813	4	FSM	ENSG00000114686.9	ENST00000510923.5	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_1	41.2148840428633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATCTGGAACAAGTAAT	1	True	NA	NA	False	NA	NA	NA	131502967	131497979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131502729
transcript_68944.known	chr3	-	3749	16	FSM	ENSG00000196353.13	ENST00000429747.6	3749	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	3.59258495608199	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTAAGAGTTGTGGTC	14	True	NA	NA	False	AATAAA	-17	NA	132035014	131533568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_131535330_131542556_131542794_131549946_131550081_131552439_131552492_131555496_131555552_131564215_131564350_131575070_131575131_131581578_131581666_131587483_131587583_131669674_131669765_131685874_131685959_131696541_131696617_131699908_131699981_131723445_131723626_131905263_131905445_132034566
transcript_68945.known	chr3	+	1783	11	FSM	ENSG00000014257.16	ENST00000351273.11	1783	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	6.3718129288296	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAGGTTTAATACACA	-5	True	NA	11	True	AATAAA	-16	NA	132317406	132368298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685_132356856_132367703
transcript_68946.known	chr3	+	3174	10	FSM	ENSG00000014257.16	ENST00000336375.10	3174	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	5.92546294487706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCTTTGTGTTTGGGGT	-5	True	NA	NA	False	AATAAA	-24	NA	132317406	132358841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685
transcript_68952.nnic	chr3	+	1008	2	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCATTTCTTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	132376827	132391067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_+_132377363_132390594
transcript_68955.known	chr3	+	2306	20	FSM	ENSG00000138246.17	ENST00000486798.5	2306	20	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	7.58844434219729	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCTAGTCTA	12	False	NA	50	True	AATAAA	-23	NA	132417708	132467346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132417761_132434537_132434619_132446474_132446551_132447320_132447471_132447897_132447940_132450646_132450848_132453297_132453505_132453598_132453695_132454065_132454158_132456234_132456402_132456500_132456581_132456662_132456833_132457268_132457369_132460249_132460358_132461049_132461206_132462466_132462524_132463695_132463818_132465994_132466071_132466298_132466395_132467169
transcript_68956.known	chr3	-	3231	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	10.7035086281513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-2	True	NA	-3	True	ATTAAA	-19	NA	132659809	132558140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_68960.known	chr3	-	3684	19	FSM	ENSG00000240303.8	ENST00000496418.5	3684	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	8.74625140161469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTGTTTCTCTG	1296	False	NA	0	True	ATTAAA	-22	NA	132659649	132558137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_68968.known	chr3	-	1891	11	FSM	ENSG00000240303.8	ENST00000481970.2	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	6.43816744112795	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGATTACCTACTATG	3	True	NA	NA	False	AATAAA	-19	NA	132659844	132618249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_68969.known	chr3	+	4692	12	FSM	ENSG00000081307.15	ENST00000356232.10	4692	12	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	21.5494817870235	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGGTATATTTGT	-38	True	NA	42	True	ACTAAA	-38	NA	132660328	132679794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132660699_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_68971.known	chr3	+	2997	12	FSM	ENSG00000081307.15	ENST00000494238.6	2997	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	124.539017750056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAACTACCAAATGTTT	-5	True	NA	13	True	AATAAA	-24	NA	132660361	132677782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_132661049_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_68974.known	chr3	+	3727	6	FSM	ENSG00000144868.14	ENST00000321871.11	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	30.3156725143943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGCTAATACATTTT	3	True	NA	NA	False	AATAAA	-22	NA	133038390	133397775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_133038436_133045901_133046021_133229265_133229352_133379751_133381162_133390179_133390335_133395863
transcript_68975.known	chr3	+	2165	6	FSM	ENSG00000144868.14	ENST00000393130.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	33.2601864095798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	14	True	NA	18	True	AATAAA	-31	NA	133038401	133396228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_133038436_133045901_133046021_133229269_133229352_133379751_133381162_133390179_133390335_133395863
transcript_68976.nic	chr3	+	833	5	NIC	ENSG00000144868.14	novel	2165	6	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	60.613529842767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	36	False	NA	18	True	AATAAA	-31	NA	133038323	133396228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_133038436_133045901_133046021_133229269_133229352_133390179_133390335_133395863
transcript_68980.nic	chr3	+	1983	8	NIC	ENSG00000144867.13	novel	2837	8	NA	NA	-18	680	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	97.6522359379112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGAGACCCAGTGCAGA	-25	True	NA	NA	False	AATAAA	-19	NA	133805796	133826452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552_133819821_133825391
transcript_68981.known	chr3	-	5596	8	FSM	ENSG00000154917.11	ENST00000285208.9	5596	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.80654645556407	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTCTGTGTTTAAG	-4	True	NA	NA	False	AATAAA	-23	NA	133895882	133824234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_68982.known	chr3	+	2576	7	FSM	ENSG00000144867.13	ENST00000678299.1	2576	7	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	8.45412456864826	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCCTCTCAGCCTCTT	-7	True	NA	8	True	AATAAA	-32	NA	133805814	133821492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552
transcript_68987.known	chr3	-	4335	10	FSM	ENSG00000114019.15	ENST00000422605.6	4335	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	68.2024944332213	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCTTTGCACAGGTG	-2	True	NA	-20	True	ATTAAA	-16	NA	134374447	134355876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134357764_134358539_134358717_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
transcript_68988.known	chr3	+	2182	13	FSM	ENSG00000182923.20	ENST00000684217.1	2182	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	56.1685830533602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	16	True	NA	14	True	AATAAA	-14	NA	134485753	134561767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68989.known	chr3	+	2022	13	FSM	ENSG00000182923.20	ENST00000684574.1	2022	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	63.1934310053048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATATTGTAAAGAAAAT	-17	True	NA	-18	True	NA	NA	NA	134485720	134574990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_6899.known	chr1	-	1224	7	FSM	ENSG00000143436.11	ENST00000368830.8	1224	7	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	57.2560040519769	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-5	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_68990.known	chr3	+	5293	13	FSM	ENSG00000182923.20	ENST00000383229.8	5293	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	58.6181143788619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	1	True	NA	NA	False	ATTAAA	-17	NA	134486056	134565031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68991.known	chr3	+	1740	13	FSM	ENSG00000182923.20	ENST00000514678.2	1740	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	65.161977665916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTTGCCAAAGCTTC	-32	True	NA	5	True	AATAAA	-19	NA	134486175	134575013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_68993.known	chr3	+	5045	12	FSM	ENSG00000182923.20	ENST00000682593.1	5045	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	56.7644109201129	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	266	False	NA	NA	False	ATTAAA	-8	NA	134486003	134565022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68995.known	chr3	+	5149	12	FSM	ENSG00000182923.20	ENST00000682822.1	5149	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	59.5244237669999	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-6	True	NA	NA	False	ATTAAA	-8	NA	134486049	134565022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_68996.known	chr3	+	1655	12	FSM	ENSG00000182923.20	ENST00000508778.2	1655	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	67.0686092528199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	54	False	NA	-4	True	AATAAA	-10	NA	134486109	134575004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_69.known	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	19.5	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_+_10792_10897_11188_11403
transcript_6900.nic	chr1	-	1106	7	NIC	ENSG00000143436.11	novel	1224	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	218.556946558303	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTAAGTGTTGCTT	4605	False	NA	-12	True	AATAAA	-13	NA	151763535	151759653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_151760032_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_69003.known	chr3	+	3753	13	FSM	ENSG00000288700.2	ENST00000683452.1	3753	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	70.9061880233312	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGACTGATGATTGA	-17	True	NA	NA	False	NA	NA	NA	134485720	134629751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134615183_134615439_134627939
transcript_69004.nnic	chr3	+	938	7	ISM	ENSG00000182923.20	ENST00000513295.2	2987	11	-64	7766	-2	6	5prime_fragment	FALSE	canonical	3	47	junction_1	47.3990154609425	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAATTGAGGGAATC	-13	True	NA	NA	False	NA	NA	NA	134486042	134545783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585
transcript_69006.known	chr3	-	1840	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	217	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	NA	False	NA	-3	True	ACTAAA	-19	NA	134486023	134477705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134485319
transcript_69007.known	chr3	-	1420	3	FSM	ENSG00000129055.13	ENST00000514612.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	261.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTATGCTGGGTCTTTT	-4	True	NA	-8	True	ACTAAA	-14	NA	134485989	134477710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134485700
transcript_69008.known	chr3	-	1170	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	107.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	0	True	NA	-3	True	ACTAAA	-19	NA	134485985	134477705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134485951
transcript_69009.known	chr3	-	896	3	FSM	ENSG00000129055.13	ENST00000511751.1	896	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGGATAAATTTACAGA	NA	False	NA	NA	False	NA	NA	NA	134486716	134478075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_134478716_134482805_134482932_134486586
transcript_6901.known	chr1	+	851	6	FSM	ENSG00000143450.19	ENST00000321531.10	851	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2.48193472919817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	6	True	NA	4	True	AATAAA	-15	NA	151762968	151771330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151768057_151768234_151770171_151770258_151771076
transcript_69010.known	chr3	-	1868	4	FSM	ENSG00000240086.7	ENST00000466206.6	1868	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATAAGTCTCTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	135439864	135354795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_135356322_135379261_135379428_135379780_135379848_135439755
transcript_69011.known	chr3	-	867	4	FSM	ENSG00000240086.7	ENST00000459861.6	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	7.07106781186548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTCTTAAACACTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	135439862	135373794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_135374322_135379261_135379428_135379780_135379848_135439755
transcript_69012.known	chr3	-	1974	4	FSM	ENSG00000240086.7	ENST00000653803.1	1974	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.48528137423857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTTTTCATTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	135439864	135354784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_135356417_135379261_135379428_135379780_135379848_135439755
transcript_69013.known	chr3	+	6743	14	FSM	ENSG00000073711.11	ENST00000264977.8	6743	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	13.3270202016663	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTCATTAAGGTAATT	-21	True	NA	10	True	AATAAA	-16	NA	135965727	136147894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_135965850_136001058_136003494_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
transcript_69017.known	chr3	-	6062	34	FSM	ENSG00000118007.13	ENST00000383202.7	6062	34	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	14.0583854045781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	6	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_69019.known	chr3	-	1304	8	FSM	ENSG00000118007.13	ENST00000480733.1	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	34.5478077511173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTCTTTATGTCTGTT	18	True	NA	NA	False	ATTAAA	-18	NA	136752366	136518042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136518416_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_69020.known	chr3	-	5064	33	FSM	ENSG00000118007.13	ENST00000434713.6	5064	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	21.615875965364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGAGGGTGAAGTTCCT	9	False	136752412	NA	False	NA	NA	NA	136752403	136337156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_69022.known	chr3	+	1841	16	FSM	ENSG00000114054.14	ENST00000469217.5	1841	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	184.155248514821	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGCCTTACTGTAAA	5	True	NA	23	True	ATTAAA	-15	NA	136250358	136330170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136259175_136259236_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_69024.known	chr3	+	1844	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	180.509205674761	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_69029.known	chr3	+	1799	15	FSM	ENSG00000114054.14	ENST00000251654.9	1799	15	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_10	42.6304121586494	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	-14	True	NA	22	True	ATTAAA	-14	NA	136250339	136330169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_69032.known	chr3	+	1683	14	FSM	ENSG00000114054.14	ENST00000484181.5	1683	14	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_11	142.700870570359	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327633_136327733_136328757_136328858_136329904
transcript_69034.known	chr3	+	1727	14	FSM	ENSG00000114054.14	ENST00000483687.5	1727	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	149.476601640089	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_69036.known	chr3	+	1613	13	FSM	ENSG00000114054.14	ENST00000490504.5	1613	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.512861204468	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_6904.known	chr1	-	882	6	FSM	ENSG00000143436.11	ENST00000368829.3	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	230.753028149145	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCACTGGGGCAGGGAAG	7	True	NA	NA	False	NA	NA	NA	151763484	151759874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151760182_151760815_151760900_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_69049.known	chr3	+	1929	7	FSM	ENSG00000174564.13	ENST00000329582.9	1929	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.92498812913071	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAGTTACATTTTCAAC	-5	True	NA	19	True	AATAAA	-33	NA	136957982	137011085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136958202_136980465_136980593_136982159_136982351_136989440_136989566_136991937_136992089_136995413_136995557_137010112
transcript_6906.known	chr1	+	745	5	FSM	ENSG00000143450.19	ENST00000635322.1	745	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	NA	False	NA	4	True	AATAAA	-15	NA	151762898	151771330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151770171_151770258_151771076
transcript_69061.known	chr3	+	1937	4	FSM	ENSG00000158092.7	ENST00000288986.6	1937	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	22.9540604009158	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	-16	True	NA	7	True	AATAAA	-21	NA	136862207	136949126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862320_136927983_136928228_136945582_136946296_136948258
transcript_69063.known	chr3	+	4451	4	FSM	ENSG00000158092.7	ENST00000481752.6	4451	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	60.0518294660722	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAATCTCTGAAACGT	-16	True	NA	NA	False	AATAAA	-24	NA	136862207	136951606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862354_136927983_136928228_136945582_136946296_136948258
transcript_69067.known	chr3	-	827	4	FSM	ENSG00000239213.7	ENST00000474250.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	47.6398525979621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTTACCTTTTTTTC	-13	True	NA	-118	True	GATAAA	-5	NA	136862049	136842190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136858517_136858604_136861746
transcript_69072.known	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136861572
transcript_69073.known	chr3	-	1818	3	FSM	ENSG00000239213.7	ENST00000461864.7	1860	3	42	0	-4	0	multi-exon	FALSE	canonical	3	85	junction_2	15.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-1	True	NA	NA	False	NA	NA	NA	136862037	136841101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136861746
transcript_69075.known	chr3	-	1943	3	FSM	ENSG00000239213.7	ENST00000470236.2	1943	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	57.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATGGTGGTTCATGCC	-18	True	NA	NA	False	AATACA	-32	NA	136862054	136841125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_136842570_136846527_136846587_136861614
transcript_69079.known	chr3	+	1949	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	10	True	NA	14	True	ATTAAA	-17	NA	136819125	136855888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136819629_136854442
transcript_69080.known	chr3	+	1577	2	FSM	ENSG00000168917.9	ENST00000393079.3	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	-32	True	NA	14	True	ATTAAA	-17	NA	136819083	136855888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136819215_136854442
transcript_69082.known	chr3	+	794	2	FSM	ENSG00000158092.7	ENST00000478862.1	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCTCCAAAGTTTTT	2	True	NA	NA	False	NA	NA	NA	136862266	136928724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862320_136927983
transcript_69083.known	chr3	+	577	2	FSM	ENSG00000158092.7	ENST00000460960.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTTCTAGCAGGGGCT	2	True	NA	NA	False	NA	NA	NA	136862266	136928473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_136862354_136927983
transcript_69084.known	chr3	+	3355	5	FSM	ENSG00000066405.13	ENST00000183605.10	3355	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAATAGCTTCTGCTCTT	3	True	NA	NA	False	ATTAAA	-18	NA	138010164	138033649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138010446_138023657_138023823_138024606_138024725_138029796_138029908_138030969
transcript_69086.known	chr3	-	2662	8	FSM	ENSG00000138231.13	ENST00000260803.9	2662	8	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	10.7228537170258	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGATTAGTATAACC	-5	True	NA	63	True	AATAAA	-42	NA	138174921	138160987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138162583_138163348_138163495_138163777_138163859_138167080_138167306_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_69089.nnic	chr3	-	2084	7	NIC	ENSG00000138231.13	novel	2662	8	NA	NA	-31	-384	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	35.3384430267599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTGGGTATCTTTTTT	-36	True	NA	-10	True	ATTAAA	-15	NA	138174952	138161371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_138162583_138163348_138163495_138163777_138163859_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_6909.known	chr1	+	992	2	FSM	ENSG00000203288.5	ENST00000389897.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTGTCTGGCTTCC	10	True	NA	7	True	TATAAA	-20	NA	151790841	151794402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_151791246_151793814
transcript_69093.known	chr3	+	3043	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	78.6746228525548	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	NA	False	NA	42	True	TATAAA	-6	NA	138187266	138296549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_69096.known	chr3	+	4757	22	FSM	ENSG00000114098.18	ENST00000469044.6	4757	22	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	72.7931869927561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTTCTAAAAAGGAG	6	True	NA	4	True	AATAAA	-16	NA	138187300	138298373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_69101.known	chr3	+	2777	22	FSM	ENSG00000114098.18	ENST00000491704.5	2777	22	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	84.7067236111946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTTTGAATGAAATG	6	True	NA	102	True	TATAAA	-17	NA	138187300	138296394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_69105.nic	chr3	+	2876	21	NIC	ENSG00000114098.18	novel	4757	22	NA	NA	6	0	intron_retention	FALSE	canonical	3	69	junction_1	81.8083125360742	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	NA	False	NA	34	True	AATATA	-41	NA	138187272	138296541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_69107.known	chr3	+	2221	21	FSM	ENSG00000114098.18	ENST00000461822.5	2221	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	88.2524078991616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGGCCAGAATGAATG	-19	True	NA	-38	True	AATGAA	-43	NA	138187516	138296254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_69109.known	chr3	+	4728	21	FSM	ENSG00000114098.18	ENST00000538260.5	4728	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	84.7746424351056	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGAGTCTGTTTTCCA	NA	False	NA	15	True	AATAAA	-27	NA	138187247	138298384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_6911.known	chr1	-	1264	7	FSM	ENSG00000143436.11	ENST00000467306.5	1264	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	218.99822424445	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-5	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762949_151763147_151763326
transcript_69114.known	chr3	+	2910	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	84.4397796591683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	-7	True	NA	NA	False	NA	NA	NA	138187528	138246857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_69117.known	chr3	+	3181	13	FSM	ENSG00000114098.18	ENST00000358441.6	3181	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	108.299225399918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTTGTGTGGTAAAG	11	True	NA	NA	False	AATAAA	-24	NA	138187341	138246887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_69118.known	chr3	+	1656	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	62.6815380045159	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	-5	True	NA	7	True	AATAAA	-17	NA	138187530	138245681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_69122.nic	chr3	+	1899	12	ISM	ENSG00000114098.18	ENST00000491704.5	2777	22	-14	50713	-14	0	5prime_fragment	FALSE	canonical	3	55	junction_2	97.5628638196636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	-8	True	NA	7	True	AATAAA	-17	NA	138187286	138245681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_69124.known	chr3	+	1714	11	FSM	ENSG00000114098.18	ENST00000489213.5	1714	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	85.8580223392083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTACTGTGCAAGTTTAA	19	False	NA	24	True	NA	NA	NA	138187349	138245635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_6913.known	chr1	-	1832	7	FSM	ENSG00000159445.13	ENST00000471464.5	1832	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	24.3361870472759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGTACTGTTGTTT	10	True	NA	0	True	ATTAAA	-19	NA	151909502	151874054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151889982_151890215_151895007_151895195_151909359
transcript_69138.known	chr3	+	4538	6	FSM	ENSG00000158186.13	ENST00000289104.8	4538	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.6182705963792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	138347696	138405533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138348326_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_69142.known	chr3	+	394	2	FSM	ENSG00000158186.13	ENST00000477784.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAGCTTGCCCAAGAT	43	False	NA	NA	False	AAAAAG	-2	NA	138348906	138349951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138349033_138349683
transcript_69147.known	chr3	-	2028	18	FSM	ENSG00000114107.9	ENST00000474781.5	2028	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	88.1766471763723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATCAAATCATTTTTAC	6	True	NA	NA	False	ATTAAA	-19	NA	138594339	138495012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572915_138591853_138591957_138594197
transcript_69149.known	chr3	-	2636	18	FSM	ENSG00000114107.9	ENST00000264982.8	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	55.617514853484	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTCCTCAGTGATG	-8	True	NA	-5	True	AATAAA	-23	NA	138594260	138494343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_69151.known	chr3	-	1993	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_16	60.1127544918311	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTGTGTAAATT	28	True	NA	NA	False	ATTAAA	-29	NA	138594224	138495002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_69166.nic	chr3	-	2556	17	NIC	ENSG00000114107.9	novel	2636	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_15	84.5447366782818	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTCCTCAGTGATG	-2	True	NA	-5	True	AATAAA	-23	NA	138594254	138494343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
transcript_6917.known	chr1	-	4798	6	FSM	ENSG00000159445.13	ENST00000368814.8	4798	6	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	26.8477187112797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTGGAAGAATTTT	1	True	NA	NA	False	AATAAA	-21	NA	151909511	151870865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151895007_151895195_151909359
transcript_69171.nic	chr3	-	1989	17	NIC	ENSG00000114107.9	novel	2028	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_15	84.5447366782818	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATCAAATCATTTTTAC	NA	False	NA	NA	False	ATTAAA	-19	NA	138594356	138495012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
transcript_69179.known	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_14	48.0595001592355	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	4	True	NA	-9	True	ATTAAA	-16	NA	138594248	138499883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_69180.nic	chr3	-	2095	16	ISM	ENSG00000114107.9	ENST00000484888.5	1993	18	-30	4881	0	0	5prime_fragment	FALSE	canonical	3	175	junction_14	54.2739552844845	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	-2	True	NA	-9	True	ATTAAA	-16	NA	138594254	138499883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_69182.nic	chr3	-	1945	15	NIC	ENSG00000114107.9	novel	2037	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_13	84.6309214007673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	22	True	NA	-9	True	ATTAAA	-16	NA	138594230	138499883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
transcript_69183.known	chr3	-	1811	14	FSM	ENSG00000114107.9	ENST00000489254.5	1811	14	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_12	94.2367031098698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTAGAGTGGAGTT	26	False	NA	NA	False	NA	NA	NA	138594319	138494757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138591853_138591957_138594197
transcript_69203.known	chr3	-	1054	6	FSM	ENSG00000114107.9	ENST00000464035.5	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	81.2664752527141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTCAAAATAACTGAT	2389	False	NA	-13	True	AATAAA	-17	NA	138591956	138536918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853
transcript_69205.known	chr3	+	946	5	FSM	ENSG00000158234.13	ENST00000393035.6	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	5.80409338312195	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	77	False	NA	NA	False	AATAAA	-15	NA	138608850	138633376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138608938_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_69206.known	chr3	+	927	5	FSM	ENSG00000158234.13	ENST00000393034.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	47.1062628532555	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTGCTTGATTTG	8	True	NA	NA	False	AATAAA	-8	NA	138609071	138633369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_138609147_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_69207.nnic	chr3	+	664	3	NIC	ENSG00000158234.13	novel	1086	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	78.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	-3	True	NA	NA	False	AATAAA	-15	NA	138608770	138633376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_138608938_138629106_138629157_138632929
transcript_69208.known	chr3	-	6259	24	FSM	ENSG00000051382.9	ENST00000674063.1	6259	24	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_22	23.409238316599	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTGCTATCAAATA	25	False	138834953	NA	False	ATTAAA	-17	NA	138834928	138652697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
transcript_69212.known	chr3	+	1205	8	FSM	ENSG00000175110.14	ENST00000680020.1	1205	8	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_1	48.1269579511593	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	7	True	NA	19	True	ATTAAA	-26	NA	139344019	139357129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_69216.known	chr3	+	1065	8	FSM	ENSG00000175110.14	ENST00000478464.6	4352	8	0	3287	0	-32	multi-exon	TRUE	canonical	3	27	junction_1	156.660428302486	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTAAAAATACATT	19	False	NA	-25	True	NA	NA	NA	139344564	139357014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139344719_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_69217.known	chr3	+	1774	7	FSM	ENSG00000175110.14	ENST00000480938.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	45.4327953012897	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATTTCTCTGTTAATA	14	True	NA	12	True	AATACA	-20	NA	139344026	139357051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139351061_139352646_139352793_139355681_139355791_139356918
transcript_6922.known	chr1	-	643	2	FSM	ENSG00000159445.13	ENST00000489410.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	205	False	NA	NA	False	AATAAA	-24	NA	151909637	151894829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151895195_151909359
transcript_69222.known	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_21	243.057372576181	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-16	True	NA	-5	True	NA	NA	NA	139389670	139357405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
transcript_69228.known	chr3	-	3275	22	FSM	ENSG00000184432.11	ENST00000333188.10	3275	22	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_9	59.9231934700268	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	7	True	NA	-5	True	NA	NA	NA	139389647	139357405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_69232.known	chr3	-	6602	21	FSM	ENSG00000184432.11	ENST00000677309.1	6602	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	213.20770975741	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCGTTGCTCTAATT	-3	True	NA	-3	True	AATAAA	-16	NA	139389657	139353945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_69234.known	chr3	-	3373	21	FSM	ENSG00000184432.11	ENST00000512309.2	3373	21	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_8	60.9397243183787	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATACTATTAGAC	NA	False	NA	-17	True	ACTAAA	-18	NA	139389736	139357637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_6924.known	chr1	-	616	3	FSM	ENSG00000197747.9	ENST00000368809.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1474.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAGACAGAATGTTT	1	True	NA	-19	True	AATAAA	-21	NA	151992578	151982917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151983325_151986098_151986252_151992522
transcript_69241.known	chr3	-	3524	2	FSM	ENSG00000184432.11	ENST00000504295.1	3524	2	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	8	True	NA	NA	False	NA	NA	NA	139389646	139380010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139383436_139389547
transcript_69244.known	chr3	+	1201	4	FSM	ENSG00000248932.7	ENST00000653359.1	1201	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.7973274814304	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	7	False	NA	NA	False	AATAAA	-18	NA	139389760	139445098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139389934_139419556_139419681_139423015_139423115_139444293
transcript_69246.nic	chr3	+	967	4	FSM	ENSG00000248932.7	ENST00000691594.1	1414	4	-50	497	-1	0	multi-exon	FALSE	canonical	3	8	junction_1	12.0277457017791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	-31	True	NA	75	True	AATAAA	-16	NA	139389804	139444604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139390238_139419556_139419681_139423015_139423115_139444293
transcript_69248.nic	chr3	+	957	4	FSM	ENSG00000248932.7	ENST00000685603.1	926	4	-31	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_1	13.9124245031395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	-11	True	NA	75	True	AATAAA	-16	NA	139389824	139444604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_139390248_139419556_139419681_139423015_139423115_139444293
transcript_69253.known	chr3	-	516	4	FSM	ENSG00000114115.10	ENST00000619087.4	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	16.9377946878833	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCTCTTTGCACAGCAT	-2	True	NA	NA	False	NA	NA	NA	139539587	139517573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139517681_139518420_139518523_139538780_139538960_139539459
transcript_69256.known	chr3	-	1569	6	FSM	ENSG00000163864.17	ENST00000296202.11	1569	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.78567765543682	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGACAGGATGCTAATT	4	True	NA	NA	False	NA	NA	NA	139677946	139560581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_6926.known	chr1	-	671	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	2961	junction_2	0.5	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACAGAATGTTTGTT	-22	True	NA	-16	True	AATAAA	-24	NA	151993859	151982914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_151983325_151986098_151986252_151993751
transcript_69262.known	chr3	+	5697	7	FSM	ENSG00000114120.14	ENST00000324194.12	5697	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	72.6605502012994	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGACTTGAGTGCTCT	0	True	NA	17	True	AATAAA	-28	NA	140941835	140980995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976259
transcript_69267.known	chr3	+	3537	4	FSM	ENSG00000114120.14	ENST00000507429.5	3537	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	38.724095283887	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTCTTGCATTTATG	51	False	NA	NA	False	AATAAA	-22	NA	140941886	140966211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126
transcript_69268.nic	chr3	+	904	4	NIC	ENSG00000114120.14	novel	578	4	NA	NA	208	-212	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	139.955548498641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGAAACCTAGAGGCT	291	False	NA	NA	False	ATTAAA	-12	NA	140942201	140963259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_140942730_140956526_140956692_140959462_140959541_140963126
transcript_69269.known	chr3	+	4638	7	FSM	ENSG00000114120.14	ENST00000446041.6	4638	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	113.404389489806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATATGGCTTTTTCTG	-6	True	NA	-16	True	ATTAAA	-10	NA	140941829	140979933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976262
transcript_6927.known	chr1	-	563	3	FSM	ENSG00000163191.6	ENST00000271638.3	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	3404	junction_2	62.5	1213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGAGTTGGTGAATTTG	-1	True	NA	-4	True	AATAAA	-27	NA	152037004	152032505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_152032824_152033647_152033801_152036912
transcript_69272.known	chr3	+	3160	8	FSM	ENSG00000155893.13	ENST00000393010.6	3160	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	104.182336236396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTTTGTACCTA	28	True	NA	25	True	AATAAA	-25	NA	141231860	141294644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_69273.known	chr3	+	2066	7	FSM	ENSG00000155893.13	ENST00000502783.5	2066	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	101.914043302296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTGAAGTGATTTATC	7	True	NA	NA	False	NA	NA	NA	141231839	141293605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141231912_141260122_141260255_141262242_141262341_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_69276.known	chr3	+	3302	6	FSM	ENSG00000155893.13	ENST00000286353.9	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	21.9872690436989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGTATCTGTTGGTAA	-8	True	NA	NA	False	AATAAA	-31	NA	141231824	141294924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_6928.known	chr1	-	434	3	FSM	ENSG00000197956.10	ENST00000368719.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	24.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	1	True	NA	-6	True	AATAAA	-20	NA	153535991	153534598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153534831_153535201_153535361_153535948
transcript_69281.known	chr3	+	479	5	FSM	ENSG00000155893.13	ENST00000505502.1	479	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	14.1664215665072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCACCTGGTTTTGAT	49	True	NA	8	True	ATTAAA	-20	NA	141231881	141236389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141235397_141235555_141236271
transcript_69282.known	chr3	+	644	3	FSM	ENSG00000177311.12	ENST00000510338.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAATGAAAAAAGGCA	-16	True	NA	NA	False	NA	NA	NA	141402348	141442826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141402450_141403926_141404032_141442388
transcript_69283.known	chr3	+	862	4	FSM	ENSG00000114125.14	ENST00000477393.1	862	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	737.044548630995	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGCGCACACAGCTTAGA	13	True	NA	17	True	ATTAAA	-28	NA	141738318	141745517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141738510_141742643_141742908_141743508_141743557_141745158
transcript_69284.known	chr3	+	2669	3	FSM	ENSG00000114125.14	ENST00000273480.4	2669	3	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_1	162.5	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTATGTAATTGTT	-8	True	NA	NA	False	CATAAA	-21	NA	141738297	141747560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141738517_141743508_141743557_141745158
transcript_69285.known	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	-29	True	NA	24	True	AATAAA	-17	NA	141738276	141745700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141738517_141745158
transcript_69287.known	chr3	+	1847	7	FSM	ENSG00000069849.11	ENST00000286371.8	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	1686	junction_5	167.264677150384	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTTTTGTGTAAGCAT	0	True	NA	44	True	TATAAA	-33	NA	141876642	141926549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_141876911_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_69288.nnic	chr3	+	1570	7	NIC	ENSG00000069849.11	novel	569	5	NA	NA	-306	18	combination_of_known_splicesites	FALSE	canonical	3	86	junction_1	714.301154198206	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGGGTTCTTTGTAA	580	False	NA	22	True	AATAAA	-18	NA	141877222	141926200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_141877563_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_6929.nnic	chr1	-	549	3	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	70	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9746	False	NA	-6	True	AATAAA	-20	NA	153536274	153534598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_153534831_153535201_153535361_153536116
transcript_69293.known	chr3	-	2360	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	123.58644747706	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	513	False	NA	-9	True	AAGAAA	-30	NA	142028665	141951501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_69299.nic	chr3	-	1235	10	NIC	ENSG00000114126.18	novel	1201	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_9	188.841562698653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	-1	True	NA	-23	True	AATAAA	-32	NA	142028626	141952480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142028578
transcript_6930.known	chr1	-	673	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	73	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9805	False	NA	-6	True	AATAAA	-20	NA	153536215	153534598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153534831_153535201_153535376_153535948
transcript_69300.known	chr3	-	1442	10	FSM	ENSG00000114126.18	ENST00000495310.5	1442	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	187.931298190339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGGAGATAGTGGG	532	False	NA	NA	False	AAGAAA	-6	NA	142028646	141952275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_142005440_142005545_142028578
transcript_69306.nic	chr3	-	2184	9	NIC	ENSG00000114126.18	novel	1442	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	190.680852473446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	516	False	NA	-9	True	AAGAAA	-30	NA	142028662	141951501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142005440_142005545_142028578
transcript_69309.nic	chr3	-	1205	9	NIC	ENSG00000114126.18	novel	1442	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	190.680852473446	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	516	False	NA	-23	True	AATAAA	-32	NA	142028662	141952480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142005440_142005545_142028578
transcript_6931.known	chr1	-	673	4	FSM	ENSG00000197956.10	ENST00000368720.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7678690770727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9776	False	NA	-6	True	AATAAA	-20	NA	153536244	153534598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153534831_153535201_153535361_153535788_153535934_153536107
transcript_69312.known	chr3	-	1403	8	FSM	ENSG00000114126.18	ENST00000477292.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	216.656410013643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCCTTGACGATCGT	-1	True	NA	NA	False	NA	NA	NA	142028626	141952142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142028578
transcript_69316.known	chr3	-	746	7	FSM	ENSG00000114126.18	ENST00000478006.5	746	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_6	220.351739019434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACAAGTGAGTGGAGAA	-6	True	NA	NA	False	AATACA	-34	NA	142028631	141963819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142028578
transcript_6932.known	chr1	-	566	4	FSM	ENSG00000196154.12	ENST00000354332.8	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	111.505854355525	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	2	True	NA	1	True	AATAAA	-25	NA	153545802	153543612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653_153544810_153545469_153545519_153545752
transcript_69323.known	chr3	-	9815	16	FSM	ENSG00000175066.16	ENST00000392993.7	9815	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	7.2467617289073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTTATTTGCTTTG	4	True	NA	-2	True	ATTAAA	-18	NA	142225585	142157526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_69326.nic	chr3	-	1740	15	ISM	ENSG00000175066.16	ENST00000392993.7	9815	16	-27	12656	-20	0	5prime_fragment	FALSE	canonical	2	7	junction_6	7.49965985623239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATATCCTGTGACCTC	-23	True	NA	NA	False	ATTAAA	-26	NA	142225612	142170182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_69328.nic	chr3	-	1126	10	ISM	ENSG00000175066.16	ENST00000480757.5	4479	17	-64	21732	-20	525	5prime_fragment	FALSE	canonical	3	23	junction_1	5.16397779494322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTGGTATTTAGTTT	-23	True	NA	NA	False	ATTAAA	-16	NA	142225612	142185640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_142185794_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_69332.known	chr3	-	10143	42	FSM	ENSG00000114127.11	ENST00000264951.8	10143	42	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.87022945029165	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTTCTTTTATTAC	6	False	NA	1	True	ATTAAA	-22	NA	142448062	142306606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_142311814_142312597_142312759_142313135_142313175_142318591_142318695_142318789_142318904_142329433_142329616_142332374_142332532_142332966_142333090_142335447_142335510_142347233_142347343_142355400_142355497_142356911_142357120_142359861_142359932_142365046_142365180_142365309_142365367_142370484_142370621_142371238_142371329_142375797_142375945_142376478_142376595_142380081_142380181_142383299_142383414_142384522_142384686_142397328_142397461_142400443_142400548_142403673_142403773_142403868_142403990_142404906_142405077_142412543_142412664_142414134_142414292_142417139_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_69336.known	chr3	-	2075	12	FSM	ENSG00000114127.11	ENST00000463916.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	2.94859540731397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTTATGTAATTTCT	4	True	NA	NA	False	AATAAA	-41	NA	142448010	142417840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_6934.known	chr1	-	537	3	FSM	ENSG00000196154.12	ENST00000468373.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	104.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-2	True	NA	1	True	AATAAA	-25	NA	153545806	153543612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543940_153544653_153544810_153545752
transcript_69341.nic	chr3	-	2482	10	ISM	ENSG00000175054.16	ENST00000653868.1	8096	35	-133	64755	-133	0	5prime_fragment	FALSE	canonical	3	32	junction_5	8.17554317295429	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTAGTCCAGTAAAACTT	NA	False	NA	NA	False	ACTAAA	-45	NA	142578866	142555897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242_142561422_142562231_142563110_142566120_142566262_142568062_142568155_142578645
transcript_69342.nic	chr3	-	1819	3	ISM	ENSG00000175054.16	ENST00000507148.1	724	6	-142	4417	-133	-4417	5prime_fragment	FALSE	canonical	3	37	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATTATAGTACATTG	NA	False	NA	NA	False	AAGAAA	-9	NA	142578866	142564755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_142566262_142568062_142568155_142578645
transcript_69348.known	chr3	+	3700	16	FSM	ENSG00000120756.13	ENST00000457734.7	3700	16	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_14	48.2505497953708	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTATATTTATTTCAT	-23	True	NA	18	True	AATAAA	-20	NA	142596392	142713664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_6935.known	chr1	-	573	3	FSM	ENSG00000196154.12	ENST00000368715.5	573	3	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	115.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	5031	False	NA	1	True	AATAAA	-25	NA	153545063	153543612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653_153544810_153544957
transcript_69353.nic	chr3	+	1704	12	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-6	15423	-6	-197	5prime_fragment	FALSE	canonical	3	324	junction_11	39.0007416755075	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCTAGTCAGACACTTT	-29	True	NA	9	True	AATAAA	-18	NA	142596386	142698241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952
transcript_69356.nic	chr3	+	3809	11	NIC	ENSG00000144935.16	novel	4324	12	NA	NA	-36	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_6	19.9371512508683	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	-14	True	NA	NA	False	AATAAA	-21	NA	142724528	142807888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_142724732_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142792823_142792968_142802168_142802345_142803976_142804179_142804435_142804631_142806007
transcript_69366.known	chr3	-	1896	9	FSM	ENSG00000163710.9	ENST00000295992.8	1896	9	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_6	9.23309265630969	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAACAACCACTAAAC	-3	True	NA	NA	False	AATAAA	-15	NA	142889083	142817873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_142818466_142820877_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142848216_142848473_142887668_142887778_142888813
transcript_69367.known	chr3	+	3491	28	FSM	ENSG00000163714.18	ENST00000493598.6	3491	28	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_9	115.745036957301	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	23	True	NA	21	True	AATAAA	-21	NA	143001620	143056846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_69369.known	chr3	+	7424	28	FSM	ENSG00000163714.18	ENST00000473835.7	7424	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	188.148206474182	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGTTAGGAAAGTTC	-28	True	NA	NA	False	TTTAAA	-31	NA	143001569	143060725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_6937.known	chr1	-	513	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	16	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGATGGTTTGAGAGA	-2	True	NA	-7	True	AATAAA	-17	NA	153545806	153543620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653_153544810_153545752
transcript_69375.known	chr3	+	3557	27	FSM	ENSG00000163714.18	ENST00000488497.7	3557	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	238.469193425519	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAACGGTCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	143001167	143056500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_69376.nic	chr3	+	2793	26	Fusion	ENSG00000241570.8_ENSG00000163714.18	novel	7424	28	NA	NA	5	-66	multi-exon	FALSE	canonical	0	0	junction_15	193.031785983552	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGATAAAGAAAAATTGG	4	False	NA	NA	False	NA	NA	NA	143001528	143053716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675
transcript_69377.nic	chr3	+	2796	26	ISM	ENSG00000241570.8_ENSG00000163714.18	ENST00000473835.7	7424	28	-41	7009	5	-66	5prime_fragment	FALSE	canonical	0	0	junction_15	195.433262266176	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGATAAAGAAAAATTGG	4	False	NA	NA	False	NA	NA	NA	143001528	143053716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675
transcript_6938.known	chr1	-	755	2	FSM	ENSG00000196154.12	ENST00000481009.1	755	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-9	True	NA	1	True	AATAAA	-25	NA	153545097	153543612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153543924_153544653
transcript_69382.nic	chr3	+	2461	23	Fusion	ENSG00000241570.8_ENSG00000163714.18	novel	7424	28	NA	NA	5	734	multi-exon	FALSE	canonical	0	0	junction_15	203.433076290277	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAATCAAAA	4	False	NA	-13	True	NA	NA	NA	143001528	143038940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893
transcript_69383.nic	chr3	+	2464	23	ISM	ENSG00000241570.8_ENSG00000163714.18	ENST00000473835.7	7424	28	-41	21785	5	734	5prime_fragment	FALSE	canonical	0	0	junction_15	205.950547703019	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAATCAAAA	4	False	NA	-13	True	NA	NA	NA	143001528	143038940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893
transcript_69386.known	chr3	+	1580	12	FSM	ENSG00000163714.18	ENST00000461591.5	1580	12	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_9	157.66944184769	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTAGAAAGACCTCCTA	12	True	NA	NA	False	NA	NA	NA	143001609	143023395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852
transcript_69387.known	chr3	+	588	6	FSM	ENSG00000163714.18	ENST00000493782.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_4	111.267964841638	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGATTTGCAGATCAAAA	-1	True	NA	NA	False	AAAAAG	-23	NA	143001523	143016888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_69389.known	chr3	+	438	3	FSM	ENSG00000241570.8	ENST00000607937.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCCTTGAGCCTT	171	False	NA	NA	False	AAGAAA	-45	NA	142964129	142964810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_142964331_142964464_142964637_142964745
transcript_69390.known	chr3	+	610	2	FSM	ENSG00000241570.8	ENST00000478823.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGACCATCCTGGCCA	201	False	NA	NA	False	NA	NA	NA	142964159	142964903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_142964331_142964464
transcript_69392.known	chr3	-	561	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTCATTTTTAAT	-15	True	NA	0	True	TTTAAA	-20	NA	143001467	143000906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_143000900_143001500
transcript_69394.known	chr3	-	712	2	FSM	ENSG00000181804.15	ENST00000498717.2	712	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTTATGCAGTA	-9	True	NA	NA	False	AATAAA	-16	NA	143848469	143847593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_143847984_143848147
transcript_69395.known	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	58.5808625023868	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-1	True	NA	-16	True	AATAAA	-14	NA	146161184	146069439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_69397.known	chr3	-	3665	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	32.9734273860065	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTGTTGTTCTATT	2552	False	NA	-20	True	AATAAA	-10	NA	146161167	146069443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_69404.nnic	chr3	-	879	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4868	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_3	1343.81769596921	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTGTTTAGTTTA	NA	False	NA	45	True	AATAAA	-27	NA	146411709	146391362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_146391563_146395759_146395922_146401359_146401560_146411392
transcript_69405.nnic	chr3	-	825	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4868	-54	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_3	1343.81769596921	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATATATATTCTTTCTGC	NA	False	NA	-9	True	AATAAA	-21	NA	146411709	146391416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_146391563_146395759_146395922_146401359_146401560_146411392
transcript_69406.nnic	chr3	-	680	3	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4867	0	at_least_one_novel_splicesite	FALSE	canonical	3	3127	junction_1	400.5	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTGTTTAGTTTA	NA	False	NA	45	True	AATAAA	-27	NA	146411710	146391362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_146391563_146395759_146395922_146411392
transcript_69412.known	chr3	-	1976	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_5	39.6579121992069	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	-6	True	NA	-23	True	AATAAA	-18	NA	146544607	146515179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_69418.known	chr3	-	996	8	FSM	ENSG00000188313.13	ENST00000448787.6	996	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	138.138351233945	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGCTCTGGTTGTATA	-19	True	NA	-119	True	NA	NA	NA	146544620	146515954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_69420.known	chr3	-	1443	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	141.232186884736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACTTCCTTTGAAAA	-6	True	NA	19	True	AAAAAG	-25	NA	146544737	146515816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
transcript_69429.known	chr3	-	581	7	FSM	ENSG00000188313.13	ENST00000488253.5	581	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	209.96560564901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGGTAGTGGATT	331	False	NA	NA	False	NA	NA	NA	146544530	146516058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_6943.known	chr1	-	956	3	FSM	ENSG00000188643.11	ENST00000368705.2	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	409.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTCCCTCCCTGGGGG	6978	False	NA	NA	False	NA	NA	NA	153609344	153607361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153607693_153607998_153608178_153608898
transcript_69431.known	chr3	-	870	7	FSM	ENSG00000188313.13	ENST00000478267.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	148.346066869181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTAAATCAGGATTCCC	12	True	NA	NA	False	AGTAAA	-35	NA	146544538	146516902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_69437.known	chr3	-	701	6	FSM	ENSG00000188313.13	ENST00000463777.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	221.432969541575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-5	True	NA	-21	True	AAAAAG	-40	NA	146544555	146515801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146516102_146517005_146517168_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_6944.known	chr1	-	1146	3	FSM	ENSG00000188643.11	ENST00000368704.5	1146	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	405	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-5	True	NA	-6	True	ATTAAA	-21	NA	153609337	153606885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153607693_153607998_153608178_153609177
transcript_69441.known	chr3	-	817	6	FSM	ENSG00000188313.13	ENST00000494568.5	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_2	48.6185149917189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTTGTAGATAGAAATC	23	True	NA	-92	True	NA	NA	NA	146544578	146521716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_6945.known	chr1	-	1172	3	FSM	ENSG00000188643.11	ENST00000368706.9	1172	3	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_2	38.5	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-13	True	NA	-6	True	ATTAAA	-21	NA	153613137	153606885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153607693_153607998_153608178_153612951
transcript_69451.known	chr3	-	1257	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	44.2743969153982	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTGTTGCACTAAAT	4	True	NA	-4	True	AATAAA	-15	NA	146544727	146527942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
transcript_69453.known	chr3	-	5306	25	FSM	ENSG00000071794.16	ENST00000465259.5	5306	25	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_13	80.1258450293454	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	1	True	NA	-23	True	AATAAA	-14	NA	149086522	149030126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_69454.nic	chr3	-	2198	18	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-32	15209	-32	4066	5prime_fragment	FALSE	canonical	3	260	junction_6	69.0610281239451	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAAAACCTGTTTTG	NA	False	NA	NA	False	ATTAAA	-35	NA	149086586	149046203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_69457.nic	chr3	-	1608	13	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-32	28740	-32	-9465	5prime_fragment	FALSE	canonical	3	260	junction_1	67.2090437036234	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTTGAAAAAGGGTC	NA	False	NA	NA	False	NA	NA	NA	149086586	149059734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_6946.known	chr1	-	1080	4	FSM	ENSG00000189334.9	ENST00000368701.5	1080	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	147.359726142827	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	8257	False	NA	-9	True	AATAAA	-21	NA	153616289	153614254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616232
transcript_69460.known	chr3	+	5996	8	FSM	ENSG00000163754.18	ENST00000345003.9	5996	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	106.051777881546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTATATATTGTTTACA	3	True	NA	NA	False	AATAAA	-16	NA	148991539	149031775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026451_149026503_149026759
transcript_69461.nic	chr3	-	2950	8	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-32	35535	-32	-16260	5prime_fragment	FALSE	canonical	3	413	junction_1	42.3040500787008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACTCTTTCAAGTATG	NA	False	NA	NA	False	ATTAAA	-14	NA	149086586	149066529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_69463.known	chr3	+	1890	7	FSM	ENSG00000163754.18	ENST00000296048.10	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_5	27.4696802553895	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	NA	False	NA	9	True	AATAAA	-16	NA	148991451	149027632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026759
transcript_69468.known	chr3	+	1563	6	FSM	ENSG00000163754.18	ENST00000484197.5	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	92.5410179325903	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGTTGTTTAATTAAA	21	False	NA	8	True	AATAAA	-15	NA	148991557	149027631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149026759
transcript_6947.known	chr1	-	1054	4	FSM	ENSG00000189334.9	ENST00000344616.4	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	49.8687165354081	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-3	True	NA	-9	True	AATAAA	-21	NA	153616325	153614254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294
transcript_69470.nic	chr3	-	709	4	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-32	43290	-32	9347	5prime_fragment	FALSE	canonical	3	425	junction_1	44.8998886412873	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAATAGAAAAGCGGT	NA	False	NA	NA	False	NA	NA	NA	149086586	149074284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_149074349_149075880_149076048_149084681_149084890_149086316
transcript_69471.known	chr3	-	501	3	FSM	ENSG00000071794.16	ENST00000481663.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	250	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATAGATTCTTGAACTC	18	True	NA	NA	False	NA	NA	NA	149086505	149083631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149083736_149084681_149084890_149086316
transcript_69472.known	chr3	-	4452	19	FSM	ENSG00000047457.14	ENST00000264613.11	4452	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2.72845092395748	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTCTTTGAGGAATT	-6	True	NA	NA	False	AATAAA	-25	NA	149221829	149172496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149173731_149176249_149176413_149177839_149177980_149178414_149178632_149179555_149179663_149182004_149182134_149183465_149183606_149185238_149185447_149186519_149186733_149188051_149188203_149198366_149198579_149199711_149199865_149202101_149202242_149206167_149206340_149207362_149207618_149209210_149209385_149210166_149210380_149212450_149212699_149221646
transcript_69475.known	chr3	+	1894	7	FSM	ENSG00000163755.9	ENST00000486530.1	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	28.3867144198753	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGTTGTATTTT	31	True	NA	NA	False	NA	NA	NA	149129690	149154109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_69476.known	chr3	-	3727	6	FSM	ENSG00000163762.7	ENST00000296059.7	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	8.07465169527454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTAATTCTTTCTG	-5	True	NA	NA	False	AATAAA	-18	NA	149333636	149318497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205_149333400_149333512
transcript_69477.known	chr3	-	907	5	FSM	ENSG00000163762.7	ENST00000470080.5	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	6.04152298679729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATACTTCTGCCC	191	False	NA	NA	False	NA	NA	NA	149333482	149321276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205
transcript_69478.known	chr3	-	1555	5	FSM	ENSG00000169908.12	ENST00000305366.8	1555	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTAGTTTC	-2	True	NA	0	True	AATAAA	-14	NA	149377649	149369021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149369881_149371686_149371868_149375442_149375589_149375679_149375770_149377370
transcript_69480.known	chr3	-	885	6	FSM	ENSG00000114744.9	ENST00000491617.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	345.206952421298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAGGTCATAATCAGAA	0	True	NA	NA	False	GATAAA	-32	NA	149752472	149741389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149741719_149750256_149750383_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_69484.known	chr3	-	632	5	FSM	ENSG00000114744.9	ENST00000483708.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	303.493410142626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAAGAGATGAAGACAAA	22	True	NA	NA	False	NA	NA	NA	149752450	149741574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149741719_149750677_149750852_149751322_149751486_149752209_149752288_149752377
transcript_69486.known	chr3	-	3694	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	41.5030119388943	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTAGACTGAGGATCT	-17	True	NA	-7	True	AATAAA	-21	NA	149752489	149738471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_69494.known	chr3	-	589	2	FSM	ENSG00000114744.9	ENST00000490008.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTCTCTGGGATTA	-17	True	NA	NA	False	AAAAAG	-21	NA	149752489	149751810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149752288_149752377
transcript_69496.known	chr3	+	2866	11	FSM	ENSG00000082996.20	ENST00000344229.7	2866	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	131.008434842952	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	48	False	NA	3	True	AATAAA	-12	NA	149812769	149962122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149813924_149814027_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_6950.known	chr1	-	1025	3	FSM	ENSG00000189334.9	ENST00000476873.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	4.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	8608	False	NA	-9	True	AATAAA	-21	NA	153615938	153614254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153615023_153615234_153615382_153615828
transcript_69506.known	chr3	+	2336	10	FSM	ENSG00000082996.20	ENST00000392894.8	2336	10	0	0	0	0	multi-exon	TRUE	canonical	3	302	junction_3	26.0929014517903	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTACTGTAGTAT	-23	True	NA	20	True	AATAAA	-29	NA	149813214	149962139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_69508.known	chr3	+	1027	10	FSM	ENSG00000082996.20	ENST00000474348.5	1027	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	90.8239376724054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTGACACAGACAGTA	-10	True	NA	NA	False	AAAAAG	-23	NA	149813227	149960833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_69518.known	chr3	+	767	9	FSM	ENSG00000082996.20	ENST00000467996.1	767	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.342617352103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTAGACCCTTGGCT	27	True	NA	NA	False	ACTAAA	-34	NA	149813264	149960750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_69520.known	chr3	+	1104	9	FSM	ENSG00000082996.20	ENST00000491086.5	1104	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	131.331581788236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAGAAAATGAAATTAATG	-34	True	NA	NA	False	AATGAA	-18	NA	149813203	149961016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_69526.known	chr3	+	557	3	FSM	ENSG00000243944.5	ENST00000489690.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTAAGTGTCTATTCG	37	False	NA	NA	False	AATATA	-27	NA	150098031	150213726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150098151_150124937_150125031_150213381
transcript_69529.known	chr3	-	942	3	FSM	ENSG00000070087.15	ENST00000460404.5	942	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	442	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTTCCATCTTTTTT	-7	True	NA	NA	False	NA	NA	NA	149970904	149965688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149966265_149968357_149968544_149970724
transcript_69530.known	chr3	-	2261	3	FSM	ENSG00000070087.15	ENST00000239940.12	2047	3	-214	0	104	0	multi-exon	FALSE	canonical	3	380	junction_1	371	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGGCTCCTGTTGTT	686	False	NA	-3	True	AATAAA	-16	NA	149971109	149964903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_149966587_149968357_149968551_149970724
transcript_69532.known	chr3	+	930	2	FSM	ENSG00000196428.13	ENST00000460316.1	930	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATTTTTTTGAATAATT	NA	False	NA	NA	False	NA	NA	NA	150456950	150459128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150457128_150458375
transcript_69535.known	chr3	+	3879	14	FSM	ENSG00000144895.12	ENST00000460851.6	3879	14	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	70.702476878016	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTGGTATTTTGTTA	0	True	NA	NA	False	AATAAA	-18	NA	150546786	150586016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_69543.known	chr3	+	944	7	FSM	ENSG00000198843.14	ENST00000477889.5	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	446.951681455116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGAAGGCCTGTACTG	-17	True	NA	NA	False	NA	NA	NA	150603290	150627693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150603500_150618708_150618929_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_69544.known	chr3	+	1010	6	FSM	ENSG00000144895.12	ENST00000474505.5	1010	6	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	46.4224083821596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTATCACAAATTATTAA	-1	True	NA	-29	True	TTTAAA	-14	NA	150546785	150564899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298
transcript_69545.known	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_4	37.2912858453553	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	13	True	NA	5	True	AATAAA	-16	NA	150603320	150630436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_69546.known	chr3	+	565	3	FSM	ENSG00000144895.12	ENST00000463863.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	38	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCTAAGTTATTGGTT	1	True	NA	NA	False	AATATA	-45	NA	150546677	150558729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150546831_150552355_150552426_150558387
transcript_69547.known	chr3	-	3022	3	FSM	ENSG00000120742.11	ENST00000239944.7	3022	3	0	0	0	0	multi-exon	FALSE	canonical	3	1829	junction_2	13	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGGGCCATGACTCTTC	17	True	NA	-10	True	ATTAAA	-18	NA	150546496	150541997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_150544499_150545702_150545779_150546051
transcript_69551.known	chr3	-	1596	2	FSM	ENSG00000120742.11	ENST00000490945.1	1596	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATGGAACTAAA	103	False	NA	NA	False	NA	NA	NA	150603228	150565795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_150567107_150602943
transcript_69553.known	chr3	+	2083	14	FSM	ENSG00000144895.12	ENST00000273435.9	2083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	164.783953949679	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTATTATAAGT	7	True	NA	13	True	AATGAA	-21	NA	150546793	150584242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562556_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_69554.nnic	chr3	+	625	4	NIC	ENSG00000240137.7	novel	539	3	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	3.39934634239519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	82	False	NA	15	True	TATAAA	-27	NA	150703485	150719988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_150703668_150706926_150707172_150707931_150708010_150719868
transcript_69556.known	chr3	+	671	4	FSM	ENSG00000240137.7	ENST00000475393.2	671	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.684198393627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	-1	True	NA	20	True	AATAAA	-34	NA	150704002	150720156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150704063_150706926_150707172_150707931_150708010_150719868
transcript_69558.known	chr3	+	302	3	FSM	ENSG00000240137.7	ENST00000471093.6	539	3	78	159	78	-7	multi-exon	FALSE	canonical	3	8	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	25	False	NA	15	True	TATAAA	-27	NA	150703563	150719988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_150703668_150707931_150708010_150719868
transcript_69561.known	chr3	-	2311	2	FSM	ENSG00000181788.4	ENST00000312960.4	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGCTTCATTTCCCTA	-23	True	NA	-19	True	AATAAA	-18	NA	150763169	150741124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_150742699_150762432
transcript_69563.known	chr3	-	6723	25	FSM	ENSG00000174953.14	ENST00000496811.6	6723	25	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_22	58.9016217235711	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGATTCAGTGAATTT	-14	True	NA	NA	False	AATAAA	-39	NA	154324487	154272545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_69567.nic	chr3	-	1402	10	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-106	24878	-35	2295	5prime_fragment	FALSE	canonical	3	270	junction_7	38.9161808994982	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAAGCAATATA	466	False	NA	NA	False	AATAGA	-10	NA	154324522	154301048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_69568.known	chr3	-	833	3	FSM	ENSG00000174953.14	ENST00000491011.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	9	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGATGTGCTTTGTTC	737	False	NA	NA	False	ATTAAA	-12	NA	154324251	154314650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_154315281_154316038_154316164_154324173
transcript_69570.known	chr3	-	3487	24	FSM	ENSG00000174953.14	ENST00000308361.10	3487	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	96.1834455532121	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAACCTCTTGGATTGGTT	13	True	NA	-31	True	AATAAA	-38	NA	154324460	154275667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_69571.known	chr3	+	5593	23	FSM	ENSG00000196549.13	ENST00000460393.6	5593	23	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	21.802124773244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	-9	True	NA	8	True	AATAAA	-21	NA	155079671	155183704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155079757_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_69573.known	chr3	+	5552	23	FSM	ENSG00000196549.13	ENST00000675418.2	5552	23	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	21.0251718480413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	8	True	NA	-18	True	AATACA	-2	NA	155079931	155183678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_69576.known	chr3	+	5656	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.2626474498408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	2	True	NA	8	True	AATAAA	-21	NA	155080318	155183704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_69585.nnic	chr3	-	1154	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	17	junction_2	210.424570808639	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAACCCAAAAAACA	-4	False	NA	NA	False	NA	NA	NA	155280499	155203254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155203787_155204791_155204904_155258618_155258683_155278366_155278560_155280246
transcript_69587.nnic	chr3	-	1648	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	200.868738234699	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTATCTTGTATTGAA	-4	False	NA	NA	False	AAAAAG	-8	NA	155280499	155249171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155249633_155250149_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69589.nnic	chr3	-	1772	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	200.625739874025	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTATCTTGTATTGAA	-4	False	NA	NA	False	AAAAAG	-8	NA	155280499	155249171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155249757_155250149_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69599.nnic	chr3	-	1177	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	125	junction_1	191.86163996195	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAATGTAAGTATG	NA	False	NA	NA	False	AAAAAG	-9	NA	155280500	155250160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69602.nnic	chr3	-	830	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	125	junction_1	191.86163996195	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-4	False	NA	1	True	ATTAAA	-28	NA	155280499	155250506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_69606.known	chr3	-	783	3	FSM	ENSG00000240045.2	ENST00000489090.2	783	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGTAAGACTGTGTG	-2	True	NA	NA	False	AATAAA	-17	NA	155293683	155290226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155290847_155290939_155291039_155293619
transcript_69609.nic	chr3	-	2482	6	ISM	ENSG00000114805.18	ENST00000460012.7	6417	23	-18	102170	-18	-91309	5prime_fragment	TRUE	canonical	0	0	junction_2	42.0161873567795	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGGGCACGGTGGCT	-33	True	NA	NA	False	AAAAAG	-25	NA	155745089	155582050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_155583643_155586064_155586195_155593940_155594185_155596231_155596379_155704145_155704265_155744839
transcript_6961.known	chr1	+	2165	6	FSM	ENSG00000160679.13	ENST00000368690.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_3	133.540405870283	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	2022	False	NA	17	True	NA	NA	NA	153633981	153646305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642242_153642430_153643226_153643365_153645063
transcript_69611.known	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	41.8864204990379	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-18	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_69612.known	chr3	-	9266	6	FSM	ENSG00000169359.16	ENST00000643144.2	9266	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	21.1035542030247	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTTTCATTTTTAT	-16	True	NA	NA	False	AATAAA	-13	NA	155854427	155821023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_69615.known	chr3	-	2546	5	FSM	ENSG00000169359.16	ENST00000644094.1	2546	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	55.4639522572995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTTTATGGCAACAT	207	False	NA	-57	True	NA	NA	NA	155854250	155827381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155842431_155842620_155853222
transcript_69620.known	chr3	-	499	2	FSM	ENSG00000169359.16	ENST00000460729.1	499	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACAGATCATTTGAGG	1095	False	NA	NA	False	NA	NA	NA	155853362	155844717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155845077_155853222
transcript_69621.known	chr3	-	1926	6	FSM	ENSG00000174928.16	ENST00000482061.6	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	29.9599732977184	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAAAGTAGCTTTTTTC	12	True	NA	-11	True	AATAAA	-19	NA	155806266	155762616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155805596_155805724_155806138
transcript_69624.known	chr3	+	8631	16	FSM	ENSG00000163655.16	ENST00000496455.7	8631	16	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_10	107.828547034427	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGACTTATGTGACTT	-5	True	NA	6	True	ATTAAA	-17	NA	155870649	155944020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155870898_155893517_155893700_155897926_155898042_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_69626.known	chr3	+	2024	14	FSM	ENSG00000163655.16	ENST00000295920.7	2024	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	289.131447758351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCGTGTGCAGTTTA	-5	True	NA	-3	True	AATAAA	-15	NA	155870649	155937710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_155870898_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_69629.known	chr3	+	1546	12	FSM	ENSG00000169282.18	ENST00000497291.5	1546	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	4.44804720826366	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAGTATCT	NA	False	NA	NA	False	ATTAAA	-17	NA	156457209	156537241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_156457359_156457452_156457533_156459826_156459872_156463701_156463747_156465642_156465687_156474733_156474821_156514363_156514450_156515099_156515221_156516269_156516365_156523826_156523948_156531408_156531498_156536657
transcript_6963.known	chr1	+	2079	6	FSM	ENSG00000160679.13	ENST00000368694.8	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	148.386791865044	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	-11	True	NA	18	True	NA	NA	NA	153634065	153646306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153643226_153643365_153645063
transcript_69632.known	chr3	-	1039	5	FSM	ENSG00000114850.7	ENST00000467789.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	514.412954249793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	-1	True	NA	96	True	NA	NA	NA	156555149	156542820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156543270_156544307_156544440_156548865_156549004_156553654_156553782_156554956
transcript_69633.known	chr3	-	4236	5	FSM	ENSG00000114850.7	ENST00000265044.7	4236	5	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_2	101.819693576439	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCCCTGTTTGATTTCT	-9	True	NA	-4	True	AATATA	-16	NA	156555117	156539552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156543270_156544307_156544440_156548904_156549004_156553654_156553782_156554956
transcript_69636.known	chr3	-	807	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	496.747106181808	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTACTAGGACGTTT	-17	True	NA	-9	True	ATTAAA	-17	NA	156555125	156543003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
transcript_69641.known	chr3	-	873	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_1	115.557585452256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGCCAATGCAGTTA	-9	True	NA	NA	False	NA	NA	NA	156555117	156543953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
transcript_69644.known	chr3	+	3861	6	FSM	ENSG00000163659.13	ENST00000295924.12	3861	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.49666295470958	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTTGGTTCC	1	True	NA	26	True	AATAAA	-38	NA	156674589	156706770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_156674797_156677656_156678615_156694019_156694189_156695864_156696026_156703423_156703703_156704683
transcript_69645.known	chr3	-	509	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	0	3	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTCTAGGCTCTACC	NA	False	NA	NA	False	AATAAA	-17	NA	156674446	156671861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_156672131_156674206
transcript_69646.known	chr3	-	2457	13	FSM	ENSG00000163660.12	ENST00000631619.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	85.2519142828411	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	398	False	NA	-7	True	AATAAA	-24	NA	157160363	157147795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
transcript_69649.nic	chr3	-	2234	13	NIC	ENSG00000163660.12	novel	2457	13	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	81.1745376060471	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	546	False	NA	-7	True	AATAAA	-24	NA	157160215	157147795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_69652.nic	chr3	-	2277	12	NIC	ENSG00000163660.12	novel	2362	13	NA	NA	-37	56	combination_of_known_junctions	FALSE	canonical	3	51	junction_8	57.3154242001197	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTACTGGTTTTCTGA	546	False	NA	-7	True	AATAAA	-31	NA	157160215	157147738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_69656.known	chr3	-	1998	11	FSM	ENSG00000163660.12	ENST00000461804.5	1998	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.9843460503903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTATGTCCCTAAT	1	True	NA	NA	False	ATTAAA	-16	NA	157160760	157146507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157146608_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_69658.known	chr3	-	2322	11	FSM	ENSG00000163660.12	ENST00000295926.8	2322	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	39.041132155715	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTGCTTTTGAATGG	-15	True	NA	NA	False	ATTAAA	-29	NA	157160147	157147552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_69664.known	chr3	-	3044	14	FSM	ENSG00000197415.12	ENST00000392832.6	3044	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	12.0727577334237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATAAAAGGAGCT	-2	True	NA	NA	False	AATATA	-19	NA	157499554	157260908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157261371_157265525_157265663_157286556_157286675_157313620_157313756_157317061_157317202_157363363_157363762_157364302_157364513_157381155_157381377_157413880_157414091_157428321_157428489_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_69666.nic	chr3	-	1627	8	ISM	ENSG00000197415.12	ENST00000392832.6	3044	14	-2	103423	-1	-640	5prime_fragment	FALSE	canonical	3	19	junction_3	12.4408806040441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGAAAAAACATTAG	-4	True	NA	NA	False	NA	NA	NA	157499556	157364331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_157364513_157381155_157381377_157413880_157414091_157428321_157428489_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_69669.nic	chr3	-	1153	5	NIC	ENSG00000197415.12	novel	992	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	17.1664644001029	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	-4	True	NA	-10	True	AATGAA	-29	NA	157499556	157459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_69673.nic	chr3	-	1407	4	ISM	ENSG00000197415.12	ENST00000494677.5	1714	5	4018	103	-1	0	3prime_fragment	FALSE	canonical	3	34	junction_2	7.11805216802087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	-4	True	NA	-10	True	AATGAA	-29	NA	157499556	157459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394
transcript_69674.nic	chr3	-	1309	4	ISM	ENSG00000197415.12	ENST00000494677.5	1714	5	3797	422	-222	154	3prime_fragment	FALSE	canonical	3	34	junction_2	7.11805216802087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTTCTCAGTTTGAA	4436	False	NA	3	True	ATTAAA	-24	NA	157499777	157459940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394
transcript_69676.known	chr3	-	4191	14	FSM	ENSG00000197415.12	ENST00000362010.7	4191	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	10.8937852105234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGATTTGTTATGCA	-15	True	NA	0	True	AATAAA	-23	NA	157503416	157259741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_157261371_157265525_157265663_157286556_157286675_157313620_157313756_157317061_157317202_157363363_157363762_157364302_157364513_157381155_157381377_157413880_157414091_157428321_157428489_157460180_157460356_157470313_157470530_157495211_157495507_157503276
transcript_69677.known	chr3	+	883	3	FSM	ENSG00000174899.13	ENST00000468043.6	920	3	32	5	4	-5	multi-exon	FALSE	canonical	3	6	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGTTGAATTCCTTTT	-28	True	NA	NA	False	AATAAA	-26	NA	157543343	157569912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_157543510_157553229_157553341_157569306
transcript_69679.known	chr3	+	1335	11	FSM	ENSG00000174891.14	ENST00000480119.5	1335	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	43.5693699747885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCAAACATTGTAAAAA	31	False	NA	NA	False	NA	NA	NA	158110128	158544443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158225656_158225734_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_69682.known	chr3	+	1607	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	34.6435107849388	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	-21	True	NA	-92	True	AATAAA	-3	NA	158110076	158544734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
transcript_69685.known	chr3	+	2597	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.5132117320231	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	-9	True	NA	NA	False	AATAAA	-16	NA	158110088	158545730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_69688.nic	chr3	+	1478	10	NIC	ENSG00000174891.14	novel	2746	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	31.947874212014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCTGTTAAAATGAATG	-18	True	NA	NA	False	AATAAA	-13	NA	158110380	158544522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_69689.known	chr3	+	2411	9	FSM	ENSG00000174891.14	ENST00000464171.5	2411	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.3601355576333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	-9	True	NA	NA	False	AATAAA	-16	NA	158110088	158545730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_69692.known	chr3	+	1727	10	FSM	ENSG00000174891.14	ENST00000295930.7	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.4787348752564	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTAGATGCTCCTT	4156	False	NA	9	True	AATAAA	-24	NA	158110051	158544835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_69695.known	chr3	+	1757	7	FSM	ENSG00000174891.14	ENST00000684683.1	1757	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.2014211299209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	-9	True	NA	NA	False	NA	NA	NA	158110088	158461983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_69697.known	chr3	+	769	7	FSM	ENSG00000174891.14	ENST00000471994.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.7961836950683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAATGAGGAAGAAG	-30	True	NA	NA	False	NA	NA	NA	158110067	158460962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_69698.known	chr3	+	1069	4	FSM	ENSG00000174891.14	ENST00000684156.1	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	22.7596133534821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATTGTTTAAGCCTT	-9	True	NA	NA	False	TATAAA	-29	NA	158110088	158203695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071
transcript_69699.known	chr3	+	7727	4	FSM	ENSG00000174891.14	ENST00000683394.1	7727	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	26.4112770527204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAAATTTATTGAAAAA	-9	True	NA	NA	False	NA	NA	NA	158110088	158210341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071
transcript_69700.known	chr3	+	2746	9	FSM	ENSG00000174891.14	ENST00000683137.1	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	32.7697936368235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	-12	True	NA	NA	False	NA	NA	NA	158110386	158545101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_69701.nic	chr3	+	1218	8	NIC	ENSG00000178053.20	novel	1247	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	290.032932683198	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	-4	True	NA	8	True	AATAAA	-18	NA	158571157	158605397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_158571348_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69703.known	chr3	+	1247	8	FSM	ENSG00000178053.20	ENST00000484955.5	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	294.850013756562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	-14	True	NA	8	True	AATAAA	-18	NA	158571172	158605397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571392_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69706.known	chr3	+	2168	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	56.8782813461245	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	7	True	NA	15	True	AATAAA	-16	NA	158571193	158606456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69711.known	chr3	+	2222	7	FSM	ENSG00000178053.20	ENST00000359117.9	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	214.181906072593	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	-3	True	NA	15	True	AATAAA	-16	NA	158571183	158606456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571392_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69713.known	chr3	+	1153	7	FSM	ENSG00000178053.20	ENST00000498592.6	1153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	318.595180266257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTATAATTAGTTATAAGA	28	False	NA	NA	False	NA	NA	NA	158571214	158605546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571348_158572975_158573040_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69714.known	chr3	+	1937	6	FSM	ENSG00000178053.20	ENST00000650753.1	1937	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	252.351025359518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATACTTCTCTAATTT	7	True	NA	-1	True	AGTAAA	-13	NA	158571193	158606358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158605096
transcript_69716.known	chr3	+	992	6	FSM	ENSG00000178053.20	ENST00000491767.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	269.105629818479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	1	True	NA	8	True	AATAAA	-18	NA	158571162	158605397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158571348_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_69719.known	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	124.635678957254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	25	True	NA	13	True	AATAAA	-13	NA	158644596	158692569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_6972.known	chr1	+	1923	5	FSM	ENSG00000160679.13	ENST00000403433.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	275.698544609869	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCAGGACTCTCTTTA	3	True	NA	14	True	NA	NA	NA	153634079	153646302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153645063
transcript_69722.known	chr3	+	6478	18	FSM	ENSG00000168827.15	ENST00000486715.6	6478	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	87.149475855386	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGGATTATGGATGT	-45	True	NA	16	True	AATAAA	-30	NA	158644526	158695581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_69731.known	chr3	-	1071	6	FSM	ENSG00000079257.8	ENST00000264265.4	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	9.52050418832953	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATTACGTTGCA	-36	True	NA	-1	True	AATAAA	-21	NA	158672648	158666413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_158666745_158667011_158667075_158668995_158669133_158669432_158669611_158670956_158671020_158672349
transcript_69732.nic	chr3	+	2671	5	ISM	ENSG00000168827.15	ENST00000478576.5	2147	14	-12	31413	-11	0	5prime_fragment	FALSE	canonical	3	319	junction_2	24.5191251883096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-56	True	NA	NA	False	NA	NA	NA	158644515	158651020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040
transcript_69733.known	chr3	+	3470	18	FSM	ENSG00000168827.15	ENST00000478254.5	3470	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	87.6582701080685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGCTTTTCTTGACT	-44	True	NA	16	True	AATAAA	-16	NA	158644527	158692572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652251_158653313_158653468_158654546_158654632_158658921_158659071_158660882_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_69734.known	chr3	+	1594	16	FSM	ENSG00000118855.21	ENST00000264266.12	1594	16	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	7.33818021643574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAAGTGTATTTGTG	-10	True	NA	NA	False	AATATA	-3	NA	158802090	158829116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_158802316_158804318_158804372_158805361_158805475_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_69738.known	chr3	+	1645	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	22.6028513442196	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	10	False	NA	16	True	AATAAA	-20	NA	159839860	159897360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_69742.known	chr3	+	1000	4	FSM	ENSG00000151967.18	ENST00000495954.5	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	51.0577015629267	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGAATGTTGACTAC	-14	True	NA	NA	False	NA	NA	NA	159839939	159897234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_159840215_159866162_159866282_159892096_159892191_159896722
transcript_69743.nic	chr3	-	1038	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-45	2831	-45	317	multi-exon	FALSE	canonical	3	102	junction_2	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAAAGAAGAATGGAGC	1	True	NA	3	True	NA	NA	NA	160449831	160438333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_69744.nic	chr3	-	792	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-45	3077	-45	71	multi-exon	FALSE	canonical	3	102	junction_2	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTAACGGCTCTCTGT	1	True	NA	NA	False	NA	NA	NA	160449831	160438579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_69746.known	chr3	-	3073	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	24.9651757454259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACCATTAATTTC	260	False	NA	-3	True	AATAAA	-19	NA	160399273	160258179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_69750.known	chr3	-	3999	20	FSM	ENSG00000068885.15	ENST00000326448.12	3999	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	27.2146489801646	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	-5	True	NA	-9	True	AATAAA	-33	NA	160399225	160256985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_69756.nic	chr3	-	3686	18	NIC	ENSG00000068885.15	novel	4044	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	27.2773782340202	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTCTCTCATATCCT	-3	True	NA	-15	True	AATAAA	-27	NA	160399223	160256991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160399145
transcript_69758.nic	chr3	-	1656	13	NIC	ENSG00000068885.15	novel	860	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	38.428143621859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGAGTTGTCTATGC	289	False	NA	NA	False	AATAAA	-24	NA	160399244	160299078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_160299275_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_69768.known	chr3	-	576	4	FSM	ENSG00000213186.8	ENST00000471155.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.8493004709113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGTGGTCATTGCCTT	16	True	NA	NA	False	ATTAAA	-27	NA	160449765	160438840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160447731_160447843_160448725_160448796_160449716
transcript_69769.known	chr3	-	577	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	56	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGTTTGTGGTC	219	False	NA	NA	False	ATTAAA	-19	NA	160449613	160438848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449444
transcript_69770.known	chr3	-	3824	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	11	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	-5	True	NA	-1	True	AATAAA	-18	NA	160449786	160435502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_69780.known	chr3	+	3028	16	FSM	ENSG00000169251.13	ENST00000351193.7	3028	16	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	49.8537416404783	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	6	True	NA	35	True	AATAAA	-32	NA	161221310	161252307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_69782.nic	chr3	+	2674	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	105.445636335612	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTGTGTGGAACATTT	-21	True	NA	9	True	AATAAA	-14	NA	161221283	161252004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_69783.nic	chr3	+	2977	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	105.445636335612	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	-21	True	NA	35	True	AATAAA	-32	NA	161221283	161252307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_69786.nic	chr3	+	1138	6	ISM	ENSG00000169251.13	ENST00000351193.7	3028	16	-42	16961	7	15	intron_retention	FALSE	canonical	3	330	junction_1	64.8678656963523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTAATTCTTTATCTGC	0	True	NA	NA	False	NA	NA	NA	161221268	161235346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_69787.known	chr3	+	600	6	FSM	ENSG00000169251.13	ENST00000473909.5	600	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	175.026398008986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTATAACTTTTCCTTC	-17	True	NA	NA	False	NA	NA	NA	161221287	161234905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_69788.known	chr3	-	914	7	FSM	ENSG00000169255.15	ENST00000468268.5	914	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_6	29.2498812913071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTACATTTTTCTTATT	4	True	NA	NA	False	AAAAAG	-19	NA	161105303	161086421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161104784_161104896_161105234
transcript_69789.known	chr3	-	552	6	FSM	ENSG00000169255.15	ENST00000484127.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	29.6647939483827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATAGAACGCGTGAAC	46	True	NA	NA	False	NA	NA	NA	161105261	161086630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161105234
transcript_69791.known	chr3	-	1640	6	FSM	ENSG00000169255.15	ENST00000652032.1	1640	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	31.6733326317266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGGGAGGTCAGTGT	-1	True	NA	NA	False	AATAAA	-17	NA	161105384	161085683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161104784_161104896_161105234
transcript_69793.known	chr3	-	3295	5	FSM	ENSG00000169255.15	ENST00000320474.10	3295	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	5.61248608016091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTTCTATTCCTAC	59	False	161105383	-2	True	AATAAA	-32	NA	161105349	161083882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161105234
transcript_69796.known	chr3	-	880	4	FSM	ENSG00000196542.9	ENST00000497137.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.6999892542435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAACAGACCTACCAGAA	1525	False	NA	NA	False	AATAGA	-2	NA	161371501	161345774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161346356_161347964_161348104_161359801_161359895_161371434
transcript_69797.known	chr3	-	3103	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_1	58	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGATTTACTTTTTAT	-2	True	NA	NA	False	AATAAA	-25	NA	161372880	161344791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161346356_161359801_161359895_161371434
transcript_69798.known	chr3	-	679	2	FSM	ENSG00000196542.9	ENST00000497374.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGCATTTAATTA	-1	True	NA	NA	False	AATATA	-3	NA	161371517	161359298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161359895_161371434
transcript_69799.known	chr3	-	471	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	13	False	NA	-68	True	NA	NA	NA	161429597	161429126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_161429100_161429600
transcript_6980.known	chr1	+	1840	4	FSM	ENSG00000160679.13	ENST00000614256.4	1840	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_3	324.982392685443	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	2022	False	NA	17	True	NA	NA	NA	153633981	153646305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153645063
transcript_69815.nnic	chr3	-	2018	7	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	323.359449117129	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAATAAGCTTA	0	True	NA	NA	False	AATAAA	-12	NA	164341489	164029064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164075972_164076045_164193507_164193677_164196618_164196701_164341167
transcript_69828.nnic	chr3	-	1946	6	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	383.328057934715	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAATAAGCTTA	0	True	NA	NA	False	AATAAA	-12	NA	164341489	164029064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164196618_164196701_164341167
transcript_69843.nnic	chr3	-	1672	5	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_2	402.942613780176	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAATAAGCTTA	0	True	NA	NA	False	AATAAA	-12	NA	164341489	164029064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164029783_164030259_164030505_164074387_164074606_164193507_164193677_164341167
transcript_69844.nnic	chr3	-	1990	5	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	358.78780288633	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAATAAGCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	164341615	164029064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164341167
transcript_69845.nnic	chr3	-	1810	5	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_4	401.447692732191	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAATAAGCTTA	0	True	NA	NA	False	AATAAA	-12	NA	164341489	164029064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164341221
transcript_69858.nnic	chr3	-	1427	4	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	433.740321697979	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAATAAGCTTA	0	True	NA	NA	False	AATAAA	-12	NA	164341489	164029064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164029783_164074387_164074606_164193507_164193677_164341167
transcript_6986.known	chr1	+	2553	3	FSM	ENSG00000160679.13	ENST00000495554.1	2553	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	377.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTTGTTTTTGT	-2	True	NA	-94	True	NA	NA	NA	153634074	153645470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153634344_153636571_153638449_153645063
transcript_69865.nnic	chr3	-	2317	4	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	901	junction_3	94.9982455978355	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	0	True	NA	-4	True	AATAAA	-33	NA	164341489	164072861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341167
transcript_69866.nnic	chr3	-	2393	4	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_3	444.619937574654	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	NA	False	NA	-4	True	AATAAA	-33	NA	164341619	164072861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341221
transcript_6987.known	chr1	-	579	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	255	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	23	True	NA	-25	True	AATAAA	-17	NA	153627268	153618803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153619039_153626319_153626534_153627138
transcript_69871.nnic	chr3	-	900	4	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	464.062016928293	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCAAGGAAACTAATTTA	0	True	NA	NA	False	AATAAA	-28	NA	164341489	164169023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164169351_164193507_164193677_164196618_164196701_164341167
transcript_69872.nnic	chr3	-	2262	3	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	121	junction_2	191.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	NA	False	NA	-4	True	AATAAA	-33	NA	164341613	164072861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164074606_164075972_164076045_164341167
transcript_69873.nnic	chr3	-	2238	3	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	405	junction_2	361	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	NA	False	NA	-4	True	AATAAA	-33	NA	164341492	164072861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr3_-_164074606_164193507_164193677_164341167
transcript_69875.known	chr3	-	2405	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCTTTGTTTTTTAT	-2	True	NA	NA	False	ATTAAA	-18	NA	165837423	165772903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
transcript_69877.known	chr3	-	702	3	FSM	ENSG00000114200.10	ENST00000479451.5	702	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTGCTCTGCTTTTA	1	True	NA	NA	False	AATAAA	-22	NA	165837420	165773078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_165773507_165786144_165786312_165837313
transcript_69885.known	chr3	-	1360	9	FSM	ENSG00000114209.15	ENST00000473645.6	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_8	499.640308121753	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	NA	False	NA	-13	True	AATAAA	-15	NA	167734939	167683909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734805
transcript_69886.known	chr3	-	1026	9	FSM	ENSG00000114209.15	ENST00000470131.5	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	611.442147713093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAATTTTAAAGTT	-15	True	NA	NA	False	NA	NA	NA	167734892	167684255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734213_167734346_167734805
transcript_6989.known	chr1	-	710	4	FSM	ENSG00000189171.15	ENST00000440685.7	710	4	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	220.467684706852	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCCATCCTGATTTCTT	-4	True	NA	-8	True	AATAAA	-34	NA	153628248	153618786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153619039_153626319_153626534_153627482_153627599_153628120
transcript_69894.known	chr3	-	1276	8	FSM	ENSG00000114209.15	ENST00000497056.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_7	143.072123955232	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACATTTCTTTACTTG	NA	False	NA	-15	True	AATAAA	-13	NA	167734930	167683911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734805
transcript_69896.known	chr3	-	934	8	FSM	ENSG00000114209.15	ENST00000461494.5	934	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	507.66604803407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGACTGTATAAATT	-3	True	NA	NA	False	NA	NA	NA	167734544	167684241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734431
transcript_6990.known	chr1	-	477	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	109.5	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	0	True	NA	-20	True	AATAAA	-22	NA	153627505	153618798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153619039_153626319_153626534_153627482
transcript_69903.known	chr3	+	1907	9	FSM	ENSG00000163536.13	ENST00000295777.9	1907	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	30.0434581065496	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAGATCTATTTTTTTA	-3	True	NA	17	True	AATAAA	-18	NA	167735722	167825566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_167736136_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_69904.known	chr3	+	1600	9	FSM	ENSG00000163536.13	ENST00000446050.7	1600	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	6.02987354759617	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCTATTTTTTTATTT	-5	True	NA	20	True	AATAAA	-21	NA	167735720	167825569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_167735824_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_69905.nic	chr3	+	2082	9	NIC	ENSG00000163536.13	novel	1600	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	30.6917639603852	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGACTAGATCTATTTT	14	True	NA	13	True	AATAAA	-14	NA	167735220	167825562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_167735813_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_69907.known	chr3	-	4310	16	FSM	ENSG00000173905.9	ENST00000470487.6	4310	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	3.87585116099964	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAATCTTTTAAACTA	-1	True	NA	-19	True	AATAAA	-15	NA	168095924	168008688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
transcript_69908.nnic	chr3	-	1922	3	NNC	ENSG00000173905.9	novel	4310	16	NA	NA	33395	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAATCTTTTAAACTA	NA	False	NA	-19	True	AATAAA	-15	NA	168011486	168008688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_168010419_168010742_168010824_168011375
transcript_69910.nnic	chr3	-	170	2	Genic_Genomic	ENSG00000213178.3	novel	410	1	NA	NA	191	57	multi-exon	FALSE	canonical	2	99	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	127	False	NA	NA	False	AATAAA	-16	NA	169483889	169483613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr3_-_169483710_169483815
transcript_69911.known	chr3	-	1671	2	FSM	ENSG00000184378.3	ENST00000330368.3	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATGTATGTATT	-3	True	NA	-4	True	AATAGA	-19	NA	169769561	169766920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169768351_169769320
transcript_69914.nnic	chr3	+	1911	8	NNC	ENSG00000085274.16	novel	4969	8	NA	NA	-18	-732	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_2	73.126951395557	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGACCATTATTTTTCA	298	False	NA	3	True	ATTAAA	-16	NA	169773377	169786770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_169773463_169774264_169774432_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69915.nnic	chr3	+	1967	8	NNC	ENSG00000085274.16	novel	4969	8	NA	NA	-18	-676	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	73.126951395557	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAATGTTTGTTTTTATT	298	False	NA	17	True	AGTAAA	-23	NA	169773377	169786826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_169773463_169774264_169774432_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69918.known	chr3	+	4969	8	FSM	ENSG00000085274.16	ENST00000349841.10	4969	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	30.9278290903985	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCCACCTCAGCCTC	-5	True	NA	NA	False	NA	NA	NA	169773395	169789716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69922.known	chr3	+	2630	8	FSM	ENSG00000085274.16	ENST00000602751.5	2630	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	70.575187869797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTCCTGTTATGCACT	4	True	NA	-42	True	NA	NA	NA	169773404	169787502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169773463_169774264_169774562_169778883_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69926.nic	chr3	+	1905	7	ISM	ENSG00000085274.16	ENST00000349841.10	4969	8	-18	4789	-18	251	5prime_fragment	FALSE	canonical	3	139	junction_1	32.3865541373097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGAAACATTTCCTCC	298	False	NA	NA	False	TTTAAA	-13	NA	169773377	169784927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621
transcript_69928.nnic	chr3	+	2013	7	NIC	ENSG00000085274.16	novel	4969	8	NA	NA	-18	-676	combination_of_known_splicesites	FALSE	canonical	3	57	junction_5	61.0427900920512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAATGTTTGTTTTTATT	298	False	NA	17	True	AGTAAA	-23	NA	169773377	169786826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169784621_169784709_169786415
transcript_69929.known	chr3	+	2833	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	63.5865551826799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAATTTTCTAGATA	26	False	NA	0	True	AATAAA	-11	NA	169773426	169787544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_69930.known	chr3	-	1781	11	FSM	ENSG00000171757.17	ENST00000522830.5	1781	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	11.081967334368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-27	True	NA	NA	False	ATTAAA	-28	NA	169812932	169793472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_69931.known	chr3	-	2383	11	FSM	ENSG00000171757.17	ENST00000446859.7	2383	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.8055541273921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTGTCTGGCTTCTTT	1	True	NA	NA	False	TATAAA	-23	NA	169812904	169793002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
transcript_69933.known	chr3	-	1475	9	FSM	ENSG00000171757.17	ENST00000522080.5	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	7.23597781920315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATCTAATTAGAAAACTAA	-4	True	NA	NA	False	TATAAA	-45	NA	169812525	169795779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
transcript_69934.known	chr3	-	3787	9	FSM	ENSG00000171757.17	ENST00000522596.6	3787	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	8.45207075218848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-1	True	NA	NA	False	ATTAAA	-28	NA	169812690	169793472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_69937.known	chr3	+	1430	9	FSM	ENSG00000008952.17	ENST00000480708.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	451.122142551216	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTATTTAGATATTTCT	3	True	NA	20	True	AATAAA	-21	NA	169966807	169993831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593_169993102_169993654
transcript_69943.known	chr3	+	6526	8	FSM	ENSG00000008952.17	ENST00000337002.9	6526	8	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_4	225.725406597648	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTATTTTATGTAT	2	True	NA	8	True	AATAAA	-22	NA	169966806	169998373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593
transcript_69949.nic	chr3	+	372	4	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-45	3100	-20	-72	5prime_fragment	FALSE	canonical	3	1450	junction_3	94.4539864460763	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGGAAAAGCTGAAAG	NA	False	NA	-7	True	CATAAA	-11	NA	169966780	169982785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706
transcript_69950.nic	chr3	+	446	4	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-45	3026	-20	0	5prime_fragment	FALSE	canonical	3	1450	junction_3	94.4539864460763	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAGAAAA	NA	False	NA	67	True	TATAAA	-13	NA	169966780	169982859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706
transcript_69953.known	chr3	+	1299	5	FSM	ENSG00000173890.17	ENST00000492492.5	1299	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.177541563692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAATATTATTAAATAT	-5	True	NA	NA	False	NA	NA	NA	170038137	170084071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170038216_170038914_170039044_170077122_170077924_170079773_170079898_170083904
transcript_69954.nnic	chr3	+	1447	4	NNC	ENSG00000173890.17	novel	1962	4	NA	NA	19	-309	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	91.6890881669618	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCCCCCTGACTGATA	14	False	NA	9	True	AATAAA	-15	NA	170038156	170085083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_170038216_170038914_170039044_170046806_170046887_170083904
transcript_69955.known	chr3	+	1962	4	FSM	ENSG00000173890.17	ENST00000355897.10	1962	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	7.1336448530109	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAAAATTGTTCTTA	-2	True	NA	5	True	ATTAAA	-18	NA	170037994	170085392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170038216_170038914_170039044_170079773_170079898_170083904
transcript_69957.known	chr3	-	12652	15	FSM	ENSG00000173889.16	ENST00000495893.7	12652	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5.84144237150311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTATTGAATAATTTT	2	True	NA	-6	True	AATAAA	-17	NA	170181733	170087583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181701
transcript_69959.known	chr3	-	5030	15	FSM	ENSG00000173889.16	ENST00000494943.5	5030	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	8.21676981072544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTCTATAATGAGTTTT	2	True	NA	-8	True	ATTAAA	-17	NA	170181733	170095220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181686
transcript_6996.known	chr1	-	1852	14	FSM	ENSG00000143621.17	ENST00000361891.9	1852	14	0	0	0	0	multi-exon	FALSE	canonical	3	3292	junction_13	246.555225639086	5178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-11	True	NA	-8	True	AATAAA	-19	NA	153670993	153661787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668558_153669835_153669879_153670170_153670231_153670917
transcript_69960.known	chr3	+	4887	18	FSM	ENSG00000163558.13	ENST00000295797.5	4887	18	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_15	79.5801700187152	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGGATCATTTTTC	-6	True	NA	54	True	AATAAA	-15	NA	170222423	170305977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170222771_170235229_170235352_170259968_170260059_170263378_170263430_170267914_170268001_170270420_170270562_170273285_170273341_170275228_170275288_170280226_170280404_170281165_170281264_170281881_170281969_170284460_170284597_170291853_170291942_170293382_170293509_170295910_170295991_170297303_170297394_170298994_170299111_170303039
transcript_69961.known	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.2997412673548	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	24	True	NA	20	True	AATAAA	-21	NA	170357714	170396835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
transcript_69964.known	chr3	+	594	2	FSM	ENSG00000136603.14	ENST00000465590.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAGAGTAAGTTACG	-6	True	NA	NA	False	GGGGCT	-11	NA	170357684	170360213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170357764_170359698
transcript_69967.known	chr3	+	599	2	FSM	ENSG00000136603.14	ENST00000490989.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	43	False	NA	NA	False	NA	NA	NA	170358508	170360160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170358646_170359698
transcript_69968.known	chr3	+	2758	3	FSM	ENSG00000013297.12	ENST00000064724.8	2758	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAATTGGCAAACATTTC	3	True	NA	NA	False	AATAAA	-26	NA	170418867	170434691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_170419293_170423162_170423328_170432523
transcript_69969.known	chr3	-	10140	8	FSM	ENSG00000013293.6	ENST00000231706.6	10140	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.87139303460597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCCATCCTACCCCT	-7	True	NA	NA	False	AATAAA	-18	NA	170586075	170459547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170467378_170480288_170481167_170483313_170483523_170486221_170486369_170498666_170498885_170501108_170501346_170526632_170527089_170585910
transcript_69971.known	chr3	-	545	4	FSM	ENSG00000163584.18	ENST00000466674.5	545	4	0	0	0	0	multi-exon	TRUE	canonical	2	20	junction_3	595.288352164077	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTCATTTTTTTGA	-2	True	NA	40	True	AATAAA	-19	NA	170870033	170866263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170866525_170868012_170868135_170868297_170868391_170869964
transcript_69974.known	chr3	-	506	4	FSM	ENSG00000163584.18	ENST00000463836.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	563.562675209146	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTTGTCTCATTTTT	-1	True	NA	36	True	AATAAA	-15	NA	170870195	170866267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170866525_170868012_170868135_170868297_170868388_170870158
transcript_69975.known	chr3	-	587	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	605.991749118748	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGTCTCATTTTTT	175	False	NA	37	True	AATAAA	-16	NA	170870208	170866266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
transcript_69976.known	chr3	-	5534	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	16.2538456987877	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTTGTACATATACAT	10	True	NA	NA	False	AATAAA	-19	NA	170908637	170888417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
transcript_69979.known	chr3	+	8031	26	FSM	ENSG00000075420.13	ENST00000415807.7	8031	26	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	14.3636207134552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTGTGATTTTAGA	-15	True	NA	NA	False	AATAAA	-22	NA	172039577	172401669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329_172337402_172341112_172341232_172343010_172343117_172344085_172344259_172346326_172346441_172347211_172347362_172352802_172353084_172362632_172362846_172378269_172378437_172380965_172381094_172397163
transcript_6998.known	chr1	-	1906	14	FSM	ENSG00000143621.17	ENST00000615950.4	1906	14	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_11	1023.57958154865	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	NA	False	NA	-8	True	AATAAA	-19	NA	153671028	153661787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668577_153669835_153669879_153670170_153670231_153670917
transcript_69982.nic	chr3	+	1812	3	ISM	ENSG00000075420.13	ENST00000421757.5	946	4	5	52294	5	-51830	5prime_fragment	FALSE	canonical	3	82	junction_1	28.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	40	False	NA	NA	False	ATTAAA	-45	NA	172039632	172135004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_172039772_172112451_172112591_172133470
transcript_69984.known	chr3	-	4536	5	FSM	ENSG00000144959.11	ENST00000475381.7	4536	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	3.56195171219375	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTATGCTTAGTTTAT	13	True	NA	NA	False	AATAAA	-18	NA	172711067	172630248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172647885_172648115_172710846
transcript_69990.nic	chr3	+	4499	26	NIC	ENSG00000114346.14	novel	4406	25	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_2	135.206366713998	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	NA	False	NA	18	True	AATAAA	-19	NA	172750684	172821473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_172750858_172752149_172752473_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_69994.known	chr3	+	4136	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_18	61.0188950699335	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	-28	True	NA	19	True	AATAAA	-20	NA	172750725	172821474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_69999.known	chr3	+	4363	25	FSM	ENSG00000114346.14	ENST00000417960.5	4363	25	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	179.741012563138	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	-28	True	NA	19	True	AATAAA	-20	NA	172750725	172821474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172750858_172752149_172752473_172754508_172754661_172755297_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_7.known	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00022_+_0_700
transcript_70.known	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	89.5	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_7552_7809_10553
transcript_70002.known	chr3	+	4087	24	FSM	ENSG00000114346.14	ENST00000232458.9	4087	24	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	104.778982437703	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	NA	False	NA	19	True	AATAAA	-20	NA	172750681	172821474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_70004.nic	chr3	+	2694	23	ISM	ENSG00000114346.14	ENST00000392692.8	4136	25	-45	5776	-1	-4593	5prime_fragment	FALSE	canonical	3	383	junction_18	62.8268807291016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCAAAAAAGGTGAGTT	NA	False	NA	NA	False	AATAAA	-4	NA	172750680	172815698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603
transcript_70010.nnic	chr3	-	1218	3	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-20006	-227575	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	0.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATGCCTGTGTGCACT	NA	False	NA	-4	True	AATAAA	-18	NA	173161241	173116937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_173117750_173159142_173159286_173160978
transcript_70015.known	chr3	-	8182	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	54.8940798265168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	-22	True	NA	-7	True	ATTAAA	-35	NA	177197482	177019343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
transcript_70020.known	chr3	-	2454	15	FSM	ENSG00000177565.18	ENST00000352800.10	2454	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	64.5093332908708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCTCTGTTGGTTTT	1	True	NA	-35	True	AGTAAA	-5	NA	177197252	177024765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177197120
transcript_70025.known	chr3	-	604	6	FSM	ENSG00000177565.18	ENST00000422066.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	125.880896088326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCCTGATGTAGTACAAA	-4	True	NA	NA	False	AATAGA	-25	NA	177197225	177051670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177160870_177160989_177197120
transcript_70033.nnic	chr3	-	561	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-40	25	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	6.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860445	178748962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_178749237_178859488_178859624_178860293
transcript_70035.known	chr3	-	7246	4	FSM	ENSG00000171121.17	ENST00000485523.5	7246	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGTTTGTGCATTT	7793	False	NA	NA	False	AATAAA	-18	NA	179259208	179236690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179243285_179244494_179244694_179250742_179250935_179258947
transcript_70036.known	chr3	+	5212	18	FSM	ENSG00000171109.19	ENST00000471841.6	5212	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	14.5269109541056	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTAGCATTTATACTA	-6	True	NA	11	True	AATAAA	-22	NA	179347708	179394936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179347811_179348844_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
transcript_70042.known	chr3	-	6315	10	FSM	ENSG00000114450.11	ENST00000232564.8	6315	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	9.12600408816936	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTATTTTTTTATG	-31	True	NA	-3	True	AATAAA	-16	NA	179451470	179396087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426243_179451345
transcript_70049.known	chr3	+	1750	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	214.32787469161	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	NA	False	NA	13	True	AATAAA	-23	NA	179562885	179588407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_70054.known	chr3	+	1854	14	FSM	ENSG00000136518.17	ENST00000429709.7	1854	14	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_4	61.85485970107	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	-22	True	NA	13	True	AATAAA	-23	NA	179562925	179588407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179563118_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_70078.known	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	461.3595849949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-3	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
transcript_70080.known	chr3	-	1354	7	FSM	ENSG00000136522.14	ENST00000476781.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_1	120.795971235247	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGGAAAGCATTTTA	-1	True	NA	22	True	AATAAA	-40	NA	179604638	179588284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
transcript_70088.known	chr3	-	673	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	500.04743774966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	4	True	NA	-2	True	ATTAAA	-24	NA	179604649	179588830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
transcript_70096.known	chr3	+	597	3	FSM	ENSG00000136518.17	ENST00000491202.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGATGCATAAGAAATG	-25	True	NA	NA	False	NA	NA	NA	179562922	179570391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179563118_179569823_179569901_179570066
transcript_70097.known	chr3	+	1899	14	FSM	ENSG00000136518.17	ENST00000392662.5	1899	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.481781827046	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATATATTTTGGACTGT	-28	True	NA	4	True	AATAAA	-14	NA	179562919	179588398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179563166_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_70098.known	chr3	+	671	7	FSM	ENSG00000136521.13	ENST00000482604.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	445.707832803309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATATTCTGTATTT	25	False	NA	-2	True	AATAAA	-3	NA	179604825	179624091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614970_179615060_179615555_179615616_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_70099.known	chr3	+	4199	6	FSM	ENSG00000136521.13	ENST00000259037.8	4199	6	0	0	0	0	multi-exon	FALSE	canonical	3	820	junction_1	87.6994868856141	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	-7	True	NA	8	True	AATAAA	-18	NA	179604793	179627647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_70102.known	chr3	+	1054	6	FSM	ENSG00000136521.13	ENST00000359944.10	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	383.39087104416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	10	True	NA	14	True	AATAAA	-32	NA	179604810	179624500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_70103.known	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_4	355.529534638123	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	-14	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
transcript_70107.known	chr3	+	4046	4	FSM	ENSG00000136521.13	ENST00000493866.5	4046	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	406.276588873475	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	-10	True	NA	8	True	AATAAA	-18	NA	179604790	179627647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_179604940_179616982_179617045_179618414_179618522_179623919
transcript_70109.known	chr3	+	2274	13	FSM	ENSG00000163728.11	ENST00000382584.8	2274	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	20.7598704770098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGGTGTACATTATTT	17	True	NA	12	True	AATAAA	-23	NA	180602210	180617828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629_180610004_180617379
transcript_70113.known	chr3	+	3000	12	FSM	ENSG00000163728.11	ENST00000296015.9	3000	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	18.116245392118	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTCCACCCAGCATAA	-31	True	NA	NA	False	ATTAAA	-20	NA	180602162	180611130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629
transcript_70118.nic	chr3	+	1457	11	ISM	ENSG00000163728.11	ENST00000296015.9	3000	12	-33	2395	-33	-1268	5prime_fragment	FALSE	canonical	3	25	junction_10	17.5057133530742	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAAGCAGAAAACAA	NA	False	NA	NA	False	AAGAAA	-33	NA	180602129	180608735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700
transcript_70122.known	chr3	+	4568	10	FSM	ENSG00000163728.11	ENST00000412756.6	4568	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	9.21485649627348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATGTTCGAATGTTT	-1	True	NA	6	True	ATTAAA	-19	NA	180602192	180610974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647
transcript_70125.known	chr3	+	3277	18	FSM	ENSG00000114416.18	ENST00000305586.11	3277	18	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_2	235.761535730712	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	-2	True	NA	6	True	AATAAA	-16	NA	180912481	180977155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180914651_180914996_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_70126.nic	chr3	+	2278	18	NIC	ENSG00000114416.18	novel	3277	18	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_16	220.646376651446	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGGGGGGTGGTGGGTG	107	False	NA	50	True	AAAAAG	-44	NA	180912641	180976579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180971074_180971156_180975312_180975405_180976121
transcript_70130.known	chr3	+	8343	17	FSM	ENSG00000114416.18	ENST00000357559.9	8343	17	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_15	132.809176429003	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGATCCTCATTATT	0	True	NA	NA	False	AATAAA	-18	NA	180912669	180982753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_70137.known	chr3	+	2651	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_15	92.5955122502645	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	2	True	NA	6	True	AATAAA	-16	NA	180912671	180977155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_70141.nic	chr3	+	2264	16	NIC	ENSG00000114416.18	novel	8343	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	285	junction_14	137.000178426486	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGGGGGGTGGTGGGTG	-8	True	NA	50	True	AAAAAG	-44	NA	180912661	180976579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_70147.known	chr3	+	2130	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_14	95.8452462279157	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	8	True	NA	24	True	ATTAAA	-24	NA	180912677	180976553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
transcript_70151.known	chr3	+	1989	15	FSM	ENSG00000114416.18	ENST00000468861.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	190.976344832846	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	1	True	NA	16	True	ATTAAA	-16	NA	180912670	180976545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_70154.known	chr3	+	1768	14	FSM	ENSG00000114416.18	ENST00000491062.5	1768	14	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	186.002831307585	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGGGGAGGGATCCT	1	True	NA	-76	True	NA	NA	NA	180912670	180976418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_180912737_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_70165.known	chr3	+	2094	3	FSM	ENSG00000242808.11	ENST00000646296.2	2094	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACATTATAATTGTTTT	1464	False	NA	NA	False	AAAAAG	-42	NA	181711101	181741290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_181711366_181715184_181715293_181739568
transcript_70166.nic	chr3	+	1638	2	ISM	ENSG00000242808.11	ENST00000646296.2	2094	3	3825	450	3825	0	3prime_fragment	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTGTTCTCTTA	165	False	NA	21	True	AATAAA	-18	NA	181714926	181740840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_181715293_181739568
transcript_70167.known	chr3	+	2920	2	FSM	ENSG00000242808.11	ENST00000647034.2	3006	2	33	53	33	-31	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTTTAAGATATCAGAAA	3	True	NA	NA	False	AATAAA	-40	NA	181727024	181742417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_181727096_181739568
transcript_70168.known	chr3	-	520	6	FSM	ENSG00000205981.9	ENST00000643241.1	520	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	608.201808612898	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGCCTCAGAGCTA	13	True	NA	-67	True	NA	NA	NA	180989714	180984577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986947_180987023_180988022_180988097_180988177_180988230_180989599
transcript_70170.known	chr3	-	828	6	FSM	ENSG00000205981.9	ENST00000486355.1	828	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	584.799658002636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	-42	True	NA	NA	False	GATAAA	-24	NA	180989769	180984274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986997_180987023_180988022_180988097_180988177_180988230_180989599
transcript_70171.known	chr3	-	610	6	FSM	ENSG00000205981.9	ENST00000479269.5	610	6	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_5	593.691165506107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGCTACAATTTTAAAAAA	319	False	NA	-54	True	AATAAA	-8	NA	180989518	180984564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180988177_180988230_180989331
transcript_70174.known	chr3	-	769	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	642.512451241219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGATGGAAATTAG	17	True	NA	NA	False	GATAAA	-21	NA	180989710	180984277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
transcript_70176.known	chr3	-	1239	5	FSM	ENSG00000205981.9	ENST00000469657.5	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	612.389173646955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTAATTTGGACTCTT	24	True	NA	-67	True	NA	NA	NA	180989703	180983772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180988022_180988097_180988177_180988230_180989599
transcript_70182.known	chr3	-	324	3	FSM	ENSG00000205981.9	ENST00000646965.1	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	738.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAGCCTTGGTATAAT	170	False	NA	-15	True	TTTAAA	-23	NA	180989667	180984525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180984711_180985925_180985997_180989599
transcript_70183.known	chr3	-	1133	3	FSM	ENSG00000205981.9	ENST00000485675.2	3748	3	0	2615	0	406	multi-exon	FALSE	canonical	3	1540	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTATTCAGCTTTAGC	-36	True	NA	NA	False	ATTAAA	-26	NA	180989763	180987179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_180988097_180988177_180988230_180989599
transcript_70184.known	chr3	+	107	1	FSM	ENSG00000206932.1	ENST00000384205.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATTGAAAATCATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	181231736	181231843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_181231700_181231800
transcript_70185.known	chr3	+	2512	1	FSM	ENSG00000181449.4	ENST00000325404.3	2512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTGAGTCTTTCATT	-1	True	NA	20	True	AATAAA	-24	NA	181711924	181714436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_181711900_181714400
transcript_70186.known	chr3	-	3147	7	FSM	ENSG00000043093.15	ENST00000632685.1	3147	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_6	36.9207108394312	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATATGGCTGTGTGTGT	4	True	NA	78	True	GATAAA	-40	NA	182980538	182942775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980486
transcript_70189.known	chr3	-	659	7	FSM	ENSG00000043093.15	ENST00000492563.1	659	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	103.582495303663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTGTAGCACTAAAGGA	5402	False	NA	-76	True	AAAAAG	-4	NA	182980520	182945103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965678_182965754_182980486
transcript_70199.known	chr3	-	2454	19	FSM	ENSG00000078070.14	ENST00000265594.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_17	24.7434365907605	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-11	True	NA	0	True	AATAAA	-28	NA	183099496	183015217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_702.known	chr1	+	1001	7	FSM	ENSG00000120948.19	ENST00000472476.5	1001	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	645.264222366828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCCAATGCCGAACCTA	-5	True	NA	-24	True	ATTAAA	-15	NA	11012653	11022176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11016122_11016255_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_70200.nnic	chr3	-	2362	19	NNC	ENSG00000078070.14	novel	2454	19	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	52.3875927729382	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	3678	False	NA	0	True	AATAAA	-28	NA	183099618	183015217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099565
transcript_70201.nic	chr3	-	2328	18	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	47.6661544886623	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	3789	False	NA	0	True	AATAAA	-28	NA	183099507	183015217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183094558_183094606_183099351
transcript_70204.known	chr3	-	2316	18	FSM	ENSG00000078070.14	ENST00000629669.2	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	51.2443768541442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTTCTGCCTCAA	3719	False	NA	-2	True	AATAAA	-26	NA	183099577	183015219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_70208.nic	chr3	-	2225	12	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	-4	-14075	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	48.4472960635345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAAATGGATCTCT	4	True	NA	NA	False	NA	NA	NA	183099534	183036543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183094558_183094606_183099351
transcript_70209.nic	chr3	-	1552	10	ISM	ENSG00000078070.14	ENST00000629669.2	2316	18	-13	29874	-13	-22625	5prime_fragment	FALSE	canonical	3	168	junction_8	14.2863139203959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCAGTCTTGATGGGAGG	3706	False	NA	NA	False	NA	NA	NA	183099590	183045093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_70211.nnic	chr3	-	998	5	NNC	ENSG00000078070.14	novel	222	2	NA	NA	-13	-6378	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	74.3051142250653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTGGGATATGT	3706	False	NA	-2	True	AATAAA	-18	NA	183099590	183078804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_183079284_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_70213.nic	chr3	-	1896	11	ISM	ENSG00000053524.13	ENST00000414362.6	3031	16	-231	27749	-231	0	5prime_fragment	TRUE	canonical	3	69	junction_3	10.581115253129	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATCTGTGTGGAGCCG	601	False	NA	-21	True	ATTAAA	-16	NA	183428332	183299768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183427901
transcript_70214.known	chr3	+	4108	2	FSM	ENSG00000176597.12	ENST00000326505.4	4108	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGATGTGTATTTAAA	2	True	NA	9	True	AATAAA	-15	NA	183253252	183273385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183253473_183269497
transcript_70217.known	chr3	+	3368	2	FSM	ENSG00000176597.12	ENST00000460419.1	3368	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACGAAAAAAGAT	25	False	NA	NA	False	NA	NA	NA	183253794	183272426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183254234_183269497
transcript_70224.known	chr3	+	1490	4	FSM	ENSG00000240024.6	ENST00000471496.6	1491	4	0	1	0	0	multi-exon	FALSE	canonical	3	54	junction_1	59.84981202978	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	-7	True	NA	25	True	AATAAA	-27	NA	183447607	183456013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183447766_183452077_183452513_183454011_183454094_183455198
transcript_70228.nnic	chr3	+	1511	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	75.7818506562679	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	1	True	NA	25	True	AATAAA	-27	NA	183447615	183456013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_183447795_183452077_183452513_183454011_183454094_183455198
transcript_70234.known	chr3	+	1241	4	FSM	ENSG00000240024.6	ENST00000686765.1	1667	4	34	392	2	84	multi-exon	FALSE	canonical	3	123	junction_1	27.8567765543682	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	-12	True	NA	NA	False	NA	NA	NA	183447650	183455625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183447948_183452077_183452513_183454011_183454094_183455198
transcript_70237.known	chr3	+	7380	9	FSM	ENSG00000114796.16	ENST00000454652.6	7380	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	42.0027900858979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	-15	True	NA	5	True	AATAAA	-18	NA	183635622	183684477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183635794_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_70239.nic	chr3	+	2178	8	NIC	ENSG00000114796.16	novel	7331	8	NA	NA	-9	-5087	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	33.6852174930046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAAAAATAATAATTTGG	NA	False	NA	NA	False	NA	NA	NA	183635600	183679390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_183635748_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_70243.known	chr3	+	7331	8	FSM	ENSG00000114796.16	ENST00000242810.11	7331	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	24.6328136883321	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	-15	True	NA	13	True	ATTAAA	-17	NA	183635622	183684519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183635794_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_70253.nic	chr3	+	2139	7	NIC	ENSG00000114796.16	novel	7331	8	NA	NA	0	-5087	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	33.9578987702256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAAAAATAATAATTTGG	-15	True	NA	NA	False	NA	NA	NA	183635622	183679390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_183635794_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_70254.nic	chr3	+	2227	7	NIC	ENSG00000114796.16	novel	7331	8	NA	NA	0	-4999	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	33.9578987702256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTTAAAGGTAATG	-15	True	NA	NA	False	AATAAA	-27	NA	183635622	183679478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_183635794_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_70259.known	chr3	+	1024	5	FSM	ENSG00000163872.16	ENST00000432781.1	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	71.4807666439022	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATACCTTGTCTGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	183775990	183793486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183793115
transcript_70262.known	chr3	-	1545	11	FSM	ENSG00000175193.14	ENST00000639900.1	1545	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	418.051252838692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTGTAAGCAGATGT	-3	True	NA	-16	True	AATAAA	-9	NA	183884879	183829401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_70263.known	chr3	-	1534	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	407.258505129113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTCTCTCTTTAA	-31	True	NA	1	True	AATAAA	-26	NA	183884907	183829384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_70268.known	chr3	-	1347	10	FSM	ENSG00000175193.14	ENST00000421484.5	1347	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	324.586232336219	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGATGCCAGCATC	-32	True	NA	-74	True	NA	NA	NA	183884908	183829508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_70270.known	chr3	-	1501	10	FSM	ENSG00000175193.14	ENST00000317096.9	1501	10	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_5	129.634529007943	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTGCCTGTCTTTGGA	-4	True	NA	NA	False	NA	NA	NA	183884880	183829270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_70276.known	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_4	287.433225941261	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-12	True	NA	-4	True	AATAAA	-21	NA	183884888	183829389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_70277.nic	chr3	-	1350	9	NIC	ENSG00000175193.14	novel	1534	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_2	339.371086533606	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	NA	False	NA	-4	True	AATAAA	-21	NA	183884950	183829389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_183829710_183833491_183833590_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_70279.known	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	434.384293322991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	21	True	NA	-11	True	AATAAA	-14	NA	183884855	183829396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_70286.nnic	chr3	-	2025	8	NNC	ENSG00000114770.17	novel	1923	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	103.871388293998	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	21	True	NA	-13	True	AATAAA	-17	NA	184017884	183983752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017049_184017157_184017829
transcript_70287.known	chr3	-	1923	7	FSM	ENSG00000114770.17	ENST00000382494.6	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	94.935065527268	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_70288.known	chr3	-	2000	7	FSM	ENSG00000114770.17	ENST00000443376.5	2000	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	100.239158460598	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183984895_183985303_183985456_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_70289.known	chr3	-	1848	6	FSM	ENSG00000114770.17	ENST00000392579.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	92.0412950799803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183984895_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_70292.known	chr3	-	883	3	FSM	ENSG00000114770.17	ENST00000446941.2	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	120	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTGTATGTTTGTCTAT	9870	False	NA	NA	False	ATTAAA	-18	NA	184017939	184000662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184001252_184014263_184014448_184017829
transcript_70294.known	chr3	-	4697	5	FSM	ENSG00000114770.17	ENST00000427120.6	4697	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	18.7533330370897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	9946	False	NA	-13	True	AATAAA	-17	NA	184017863	183983752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_70295.known	chr3	+	2562	16	FSM	ENSG00000145191.15	ENST00000648915.2	2562	16	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	27.6151327274659	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTGTCTCCATCCCT	-10	True	NA	15	True	ATTAAA	-16	NA	184135357	184145311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_70298.known	chr3	+	3084	15	FSM	ENSG00000145191.15	ENST00000649814.1	3084	15	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_9	76.0080889895065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCTGCTGCTTGTATA	13	False	NA	-33	True	NA	NA	NA	184135336	184145263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184144225_184144596_184144708_184144883
transcript_70302.known	chr3	+	585	2	FSM	ENSG00000145191.15	ENST00000432569.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGCCAGTGGACTTT	-3	True	NA	15	True	AATAAA	-30	NA	184135364	184136980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135581_184136611
transcript_70303.known	chr3	+	930	2	FSM	ENSG00000145191.15	ENST00000471832.2	930	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTGCCAGTGGACTT	-13	True	NA	14	True	AATAAA	-29	NA	184135354	184136979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184135917_184136611
transcript_70310.known	chr3	+	1931	12	FSM	ENSG00000161203.14	ENST00000292807.9	1931	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1283.10410675063	3204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	-28	True	NA	21	True	AATAAA	-15	NA	184174854	184184091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_70319.known	chr3	+	2091	11	FSM	ENSG00000161203.14	ENST00000382456.7	2091	11	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_4	1104.5581243194	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	1807	False	NA	21	True	AATAAA	-15	NA	184174688	184184091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_7032.known	chr1	+	1003	4	FSM	ENSG00000143553.11	ENST00000368685.6	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	38.4736562107401	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGTTCCAGGAGTTT	-12	True	NA	42	True	AATAAA	-35	NA	153658702	153661852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153658887_153659137_153659185_153659447_153659567_153661199
transcript_70336.nic	chr3	+	2502	21	NIC	ENSG00000161204.12	novel	2446	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	90.1698397470019	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCATGTCTGCT	-6	True	NA	18	True	ATTAAA	-15	NA	184186175	184194005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_184186281_184186506_184186655_184186795_184186876_184187363_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_70338.known	chr3	+	2624	21	FSM	ENSG00000161204.12	ENST00000429586.7	2446	21	-176	-2	-72	1	multi-exon	TRUE	canonical	3	371	junction_12	21.251529356731	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCATGTCTGCTGC	2126	False	NA	20	True	ATTAAA	-17	NA	184186022	184194007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184186281_184186506_184186655_184186795_184186876_184187396_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_70343.known	chr3	-	1552	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	244.169382806281	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-10	True	NA	25	True	NA	NA	NA	184248962	184242300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
transcript_70344.nic	chr3	-	1524	9	NIC	ENSG00000214160.10	novel	1552	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	282.469467376564	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-19	True	NA	25	True	NA	NA	NA	184248971	184242300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_70345.known	chr3	-	1697	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	316.944962690685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTTGGACTCTGCCC	19	True	NA	-58	True	NA	NA	NA	184249520	184242468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
transcript_70346.known	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.138891360881	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-9	True	NA	-14	True	AATAAA	-14	NA	184249548	184242424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
transcript_7035.known	chr1	+	922	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	219	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTAGTTTACTCTGGT	-1	True	NA	19	True	AATAAA	-12	NA	153658713	153661829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153658887_153659447_153659567_153661199
transcript_70353.nic	chr3	-	1400	9	NIC	ENSG00000214160.10	novel	1533	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	282.469467376564	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-19	True	NA	-14	True	AATAAA	-14	NA	184248971	184242424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_70357.known	chr3	-	1452	8	FSM	ENSG00000214160.10	ENST00000411922.5	1452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	315.774331717175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-10	True	NA	25	True	NA	NA	NA	184248962	184242300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184248744
transcript_7036.known	chr1	-	1008	5	FSM	ENSG00000143621.17	ENST00000480213.1	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	3818	junction_3	139.073721457362	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTATTAAAGTACTT	6508	False	NA	-64	True	NA	NA	NA	153664474	153662064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153662557_153662704_153662796_153663018_153663277_153664042_153664131_153664395
transcript_70374.known	chr3	+	975	3	FSM	ENSG00000284753.2	ENST00000324557.9	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	2	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGTTTCTTGCTTCTT	6	True	NA	14	True	AATACA	-24	NA	184249671	184258759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184249891_184257472_184257757_184258287
transcript_70376.known	chr3	+	2913	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	0	0	0	0	multi-exon	FALSE	canonical	3	2671	junction_8	281.674541803124	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	-1	True	NA	24	True	AATAAA	-16	NA	184299240	184309050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
transcript_70384.known	chr3	+	581	3	FSM	ENSG00000175166.17	ENST00000492191.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	3698	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTTTCATTAGCATG	9	True	NA	NA	False	NA	NA	NA	184299250	184300652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184299402_184299850_184299908_184300279
transcript_70385.known	chr3	+	5405	33	FSM	ENSG00000114867.22	ENST00000346169.7	5405	33	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_14	315.943601573129	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	29	True	NA	23	True	ATTAAA	-16	NA	184314605	184335353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_70387.known	chr3	+	4990	29	FSM	ENSG00000114867.22	ENST00000350481.9	4990	29	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	469.222569952748	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	29	True	NA	23	True	ATTAAA	-16	NA	184314605	184335353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_7039.known	chr1	-	2342	11	FSM	ENSG00000143614.10	ENST00000634544.1	2342	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	11.7115327775659	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGTCCTCCCTTTGT	915	False	NA	0	True	NA	NA	NA	153922030	153809809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153810311_153811730_153811849_153812021_153812133_153813249_153813453_153816272_153816589_153817371_153817543_153818039_153818172_153818790_153818923_153819605_153819736_153828012_153828349_153921838
transcript_70397.known	chr3	+	2907	18	FSM	ENSG00000114867.22	ENST00000426123.5	2907	18	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_4	437.35266031084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	-8	True	NA	NA	False	NA	NA	NA	184314568	184325299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_70398.known	chr3	+	2421	6	FSM	ENSG00000175182.15	ENST00000340957.9	2421	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	18.5321342537766	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	-9	True	NA	23	True	ATTAAA	-27	NA	184335936	184346273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_70404.known	chr3	+	994	5	FSM	ENSG00000163882.10	ENST00000438240.5	994	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	329.956815356192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAAGTCCATTT	38	True	NA	-28	True	ATTAAA	-28	NA	184361788	184368550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184362147_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_70411.known	chr3	+	791	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	314.640270785543	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGACTGCCCCTCCCCTTT	-1	True	NA	16	True	ATTAAA	-11	NA	184363402	184368533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_70412.known	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	307.53079114131	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	3	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
transcript_70413.known	chr3	+	807	4	FSM	ENSG00000163882.10	ENST00000443489.5	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	356.432633497863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTGGTGTATTGT	2	True	NA	13	True	AAAAAG	-29	NA	184363360	184368591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184368176
transcript_70414.known	chr3	-	1701	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTGTGATGCAC	29	False	184712093	-5	True	AATAAA	-19	NA	184712064	184710363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_184710400_184712100
transcript_70415.known	chr3	+	5011	47	FSM	ENSG00000156931.16	ENST00000436792.6	5011	47	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_19	18.4956567731643	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGCTGGCTCTCA	-11	True	NA	27	True	AATAAA	-27	NA	184812170	185052612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_70418.known	chr3	+	477	2	FSM	ENSG00000156931.16	ENST00000485024.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGATATTTGTAGACTT	14	True	NA	5	True	AATAAA	-18	NA	184812195	184816230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_184812226_184815783
transcript_70419.known	chr3	-	3801	7	FSM	ENSG00000113790.11	ENST00000231887.8	3801	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	4.05859855396197	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAAGTGACTT	-7	True	NA	0	True	AATAAA	-22	NA	185254049	185190623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253948
transcript_70424.known	chr3	+	1681	3	FSM	ENSG00000073803.14	ENST00000448876.5	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	34	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCACTTGCTGTTCTTTC	NA	False	NA	18	True	AATAAA	-24	NA	185282940	185293079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_185283028_185285516_185285644_185291612
transcript_70427.known	chr3	+	526	3	FSM	ENSG00000073803.14	ENST00000454237.1	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	151.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTGTTCTGTGGCC	48	False	NA	127	True	NA	NA	NA	185283025	185291917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_185283120_185285516_185285644_185291612
transcript_70432.known	chr3	-	2805	5	FSM	ENSG00000163900.11	ENST00000421852.6	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	16.7779617355625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGCTTGTTTGAAC	-3	True	NA	-17	True	AATAAA	-16	NA	185499035	185489600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185491758_185494622_185494762_185495153_185495316_185496827_185496982_185498842
transcript_70435.known	chr3	-	1060	3	FSM	ENSG00000163900.11	ENST00000296254.3	1060	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	49.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAAAGAAAATGCT	8	True	NA	NA	False	NA	NA	NA	185498987	185490996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185491758_185496827_185496982_185498842
transcript_70436.known	chr3	-	4921	2	FSM	ENSG00000163900.11	ENST00000467061.1	4921	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAAGTGCAGTGGTAAG	NA	False	NA	NA	False	NA	NA	NA	185499057	185492275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185496982_185498842
transcript_70438.nic	chr3	+	3298	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-50	696	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	31.6955734291084	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	NA	False	NA	29	True	AATAAA	-26	NA	185582445	185631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_7044.known	chr1	+	1267	3	FSM	ENSG00000284738.2	ENST00000641448.2	1325	3	53	5	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	-3	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153923963_153928634_153928771_153934735
transcript_70441.known	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	43.3777016449696	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	-9	True	NA	8	True	AATAAA	-18	NA	185586294	185633551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_70442.nic	chr3	+	3105	17	NIC	ENSG00000163904.13	novel	5596	17	NA	NA	4	696	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	63.4340208405553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	-2	True	NA	29	True	AATAAA	-26	NA	185586301	185631101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_185586515_185590113_185590170_185598411_185598546_185598991_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_70447.nic	chr3	+	1317	11	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-50	1032	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	31.5158690186388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAATTGCTCAGGCA	NA	False	NA	16	True	NA	NA	NA	185582445	185614676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563
transcript_70448.nic	chr3	+	1151	11	ISM	ENSG00000163904.13	ENST00000296257.10	5596	17	14	18875	11	1032	5prime_fragment	FALSE	canonical	3	86	junction_1	46.4703131041744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAATTGCTCAGGCA	5	True	NA	16	True	NA	NA	NA	185586308	185614676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563
transcript_7045.known	chr1	+	1254	3	FSM	ENSG00000284738.2	ENST00000641267.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	-3	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153923963_153928634_153928771_153934748
transcript_70453.known	chr3	-	4283	16	FSM	ENSG00000073792.16	ENST00000382199.7	4283	16	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_6	136.318678919003	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCTCACTGCATGTGA	-1	True	NA	-1	True	AATAAA	-18	NA	185825042	185643129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_70456.known	chr3	-	3291	15	FSM	ENSG00000073792.16	ENST00000346192.7	3291	15	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	169.118920241567	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	293	False	185825041	17	True	TTTAAA	-10	NA	185825024	185643974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_70460.nic	chr3	-	1482	10	NIC	ENSG00000073792.16	novel	3291	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	324.16517661278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGCAAGAATA	2	True	NA	NA	False	AATAAA	-15	NA	185825039	185675015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185693176_185693229_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_70461.nic	chr3	-	1481	9	ISM	ENSG00000073792.16	ENST00000346192.7	3291	15	-66	31041	-48	0	5prime_fragment	FALSE	canonical	3	737	junction_2	56.4212670453261	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGCAAGAATA	227	False	NA	NA	False	AATAAA	-15	NA	185825090	185675015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_70464.nic	chr3	-	3673	2	ISM	ENSG00000073792.16	ENST00000466476.1	469	4	-198	123434	-48	-5794	5prime_fragment	FALSE	canonical	3	895	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAATCTCAGGCCCTCC	227	False	NA	NA	False	ATTAAA	-21	NA	185825090	185819848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_185823214_185824782
transcript_70465.known	chr3	-	3426	16	FSM	ENSG00000073792.16	ENST00000457616.6	3426	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	226.615347131556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-13	True	NA	17	True	TTTAAA	-10	NA	185825012	185643974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692781_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_70468.known	chr3	-	1697	10	FSM	ENSG00000136527.19	ENST00000456380.5	1697	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	470.048014358607	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAACATAT	-9	True	NA	-39	True	AATAAA	-13	NA	185938029	185917329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185937824
transcript_70475.known	chr3	-	4178	9	FSM	ENSG00000136527.19	ENST00000453386.7	4178	9	0	0	0	0	multi-exon	TRUE	canonical	3	965	junction_8	113.562138827164	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATTGGTTCTATTCC	6	True	NA	NA	False	AATATA	-29	NA	185938014	185914557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185937824
transcript_7048.known	chr1	-	2631	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	45.3281265138373	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	0	True	NA	-3	True	AATAAA	-15	NA	153958612	153947674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
transcript_70480.known	chr3	-	976	8	FSM	ENSG00000136527.19	ENST00000382191.4	976	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	409.810658121777	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAAGACTTTCTGAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	185938103	185917714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185937824
transcript_70489.known	chr3	-	288	2	FSM	ENSG00000136527.19	ENST00000480461.1	538	2	11	239	1	-239	multi-exon	FALSE	canonical	3	103	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGAATGCATGCT	7	True	NA	13	True	NA	NA	NA	185938013	185931753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_185931853_185937824
transcript_70491.known	chr3	-	4082	13	FSM	ENSG00000244405.8	ENST00000306376.10	4082	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	20.4142855754385	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAACCTGCCTCTTTCTT	5	True	NA	-4	True	AATAAA	-27	NA	186109089	186046313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_70492.known	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	46.4990322479942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	13	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_70501.nnic	chr3	-	745	3	NNC	ENSG00000197099.8	novel	534	3	NA	NA	1459	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTACCTCCATCACTTC	NA	False	NA	-15	True	AATAAA	-13	NA	186664244	186641509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_186641624_186641953_186642129_186663788
transcript_70503.known	chr3	+	1640	10	FSM	ENSG00000090520.12	ENST00000265028.8	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_4	60.7965642304088	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	14	True	NA	31	True	AATACA	-17	NA	186570719	186585793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186581370_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
transcript_70507.known	chr3	+	2093	11	FSM	ENSG00000113889.14	ENST00000287611.8	2093	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.640312423743285	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAATTTTCTGTAATAA	-2	True	NA	NA	False	AATAAA	-18	NA	186717358	186744410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186717738_186720104_186720216_186722436_186722522_186725087_186725261_186727236_186727345_186731544_186731630_186732501_186732675_186739098_186739207_186739327_186739415_186741521_186741600_186743704
transcript_70515.known	chr3	-	1365	11	FSM	ENSG00000163918.12	ENST00000296273.7	1365	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_10	108.391189678866	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTAAAGTGAATATACAA	-3	True	NA	-41	True	AATAAA	-20	NA	186806482	186789899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_70516.known	chr3	-	1448	11	FSM	ENSG00000163918.12	ENST00000392481.6	1448	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	165.023755865633	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAATATACAATTTAT	NA	False	NA	-36	True	AATAAA	-25	NA	186806695	186789894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_70534.known	chr3	+	1889	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	409.603222643572	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-2	True	NA	30	True	AATAAA	-19	NA	186783576	186789897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_70535.known	chr3	+	1977	12	FSM	ENSG00000156976.17	ENST00000425053.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_11	564.882844578567	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	-2	True	NA	14	True	AATAAA	-3	NA	186783576	186789881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
transcript_70536.known	chr3	+	1729	10	FSM	ENSG00000156976.17	ENST00000443963.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	547.000710948147	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	18	False	NA	30	True	AATAAA	-19	NA	186783596	186789897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_70537.known	chr3	+	5327	4	FSM	ENSG00000156976.17	ENST00000485101.5	5327	4	0	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_1	215.74213002255	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTTTGGTCATTT	-1	True	NA	27	True	AATAAA	-16	NA	186783577	186789894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186783640_186784431_186784478_186784563_186786052_186786163
transcript_70540.known	chr3	+	4604	8	FSM	ENSG00000073849.16	ENST00000169298.8	4604	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	28.3037460562436	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	-27	True	NA	27	True	AATAAA	-20	NA	186930525	187078553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_70548.nnic	chr3	-	920	5	NNC	ENSG00000163923.10	novel	749	4	NA	NA	6	-20032	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	132.387688249323	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGCTTGTTTCAAT	NA	False	NA	-7	True	AATAAA	-17	NA	187180902	187140979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187141172_187142295_187142393_187142775_187143109_187173615_187173676_187180664
transcript_70552.known	chr3	-	749	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	184.588431080848	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	NA	False	NA	-16	True	AATAAA	-26	NA	187180908	187120947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
transcript_70561.nnic	chr3	-	1468	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-159	-20032	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	138.516745878933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGCTTGTTTCAAT	NA	False	NA	-7	True	AATAAA	-17	NA	187181067	187140979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187141172_187142295_187143109_187173615_187173676_187180664
transcript_70563.known	chr3	-	729	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_2	35.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-4	True	NA	-16	True	AATAAA	-26	NA	187139496	187120947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187121329_187127998_187128063_187139212
transcript_70571.nnic	chr3	-	488	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-57	-50631	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	111.5	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAATATTTTCTTGTA	NA	False	NA	-9	True	AATAAA	-13	NA	187180965	187171578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187171706_187173615_187173676_187180664
transcript_70575.known	chr3	-	653	2	FSM	ENSG00000163923.10	ENST00000455270.5	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	8	True	NA	-16	True	AATAAA	-26	NA	187139484	187120947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187121329_187139212
transcript_7058.known	chr1	+	1749	10	FSM	ENSG00000143578.16	ENST00000368607.8	1749	10	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_1	40.879225911349	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	3	True	NA	20	True	AATAAA	-15	NA	153967901	153974359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968165_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_70580.nic	chr3	-	1612	2	ISM	ENSG00000163923.10	ENST00000433055.1	749	4	-56	51416	-56	-51416	5prime_fragment	FALSE	canonical	3	348	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAAAACCAAGGG	NA	False	NA	NA	False	ACTAAA	-12	NA	187180964	187172363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_187173676_187180664
transcript_70581.nnic	chr3	-	3050	2	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-25	-51416	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAAAACCAAGGG	NA	False	NA	NA	False	ACTAAA	-12	NA	187180933	187172363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187175145_187180664
transcript_70583.nnic	chr3	-	2638	2	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-25	-51828	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCCCAATGTTCTTT	NA	False	NA	-3	True	AATAAA	-13	NA	187180933	187172775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_187175145_187180664
transcript_70586.nnic	chr3	+	1655	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19152	-996	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	6	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTAACTACTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	187178333	187200466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_187178875_187197589_187197788_187199550
transcript_70587.known	chr3	-	2440	9	FSM	ENSG00000127241.18	ENST00000169293.10	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3.07967124868873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACGTATTAACAGCATTC	309	False	NA	NA	False	AATAAA	-14	NA	187291957	187246360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187247386_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_70591.nic	chr3	-	1291	5	ISM	ENSG00000127241.18	ENST00000169293.10	2440	9	136	9945	61	279	5prime_fragment	FALSE	canonical	3	9	junction_2	2.59807621135332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTCTGTTTATTTTT	445	False	NA	-3	True	AATAAA	-13	NA	187291821	187256305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_70593.known	chr3	-	607	2	FSM	ENSG00000157005.4	ENST00000287641.4	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGGTTTCTATTG	-1	True	NA	3	True	AATAAA	-23	NA	187670394	187668911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_187669278_187670153
transcript_70595.nic	chr3	+	1172	3	NIC	ENSG00000145012.14	novel	18316	12	NA	NA	26	799	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAAGAATATTAGACT	19	False	NA	NA	False	AATAAA	-9	NA	188154182	188407090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_188154253_188225404_188225528_188406111
transcript_70596.known	chr3	-	3477	15	FSM	ENSG00000090530.10	ENST00000319332.10	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	73.5535345784252	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCATTTATTTTTGT	1	True	NA	-14	True	AATAAA	-17	NA	190120897	189956727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190120251
transcript_70598.known	chr3	-	2963	15	FSM	ENSG00000090530.10	ENST00000427335.6	2963	15	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_14	238.896324964686	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCATCTGCTTATATTTT	0	True	NA	-15	True	AATAAA	-18	NA	190122437	189956830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190122202
transcript_7060.known	chr1	+	1750	10	FSM	ENSG00000143578.16	ENST00000271889.8	1750	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	43.7975138817516	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	22	False	NA	20	True	AATAAA	-15	NA	153967920	153974359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968185_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_70603.nnic	chr3	+	802	3	NNC	ENSG00000225764.3	novel	807	4	NA	NA	23926	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	29	True	ATTAAA	-21	NA	190144889	190150166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_190145136_190145265_190145442_190149786
transcript_70606.known	chr3	-	3446	4	FSM	ENSG00000163347.6	ENST00000295522.4	3446	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2.44948974278318	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATTGGCTTGTTTTCT	-2	True	NA	-4	True	AATAAA	-22	NA	190322446	190305706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_190308440_190310168_190310254_190312871_190313037_190321983
transcript_70609.known	chr3	+	1957	8	FSM	ENSG00000196083.10	ENST00000422940.5	1957	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.16496563917521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	19	False	NA	NA	False	AATAAA	-43	NA	190514101	190630285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_7061.known	chr1	+	1496	10	FSM	ENSG00000143578.16	ENST00000368600.7	1496	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	55.6891726515782	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCAGAAGTTTGAAAT	-9	True	NA	22	True	AATAAA	-17	NA	153968242	153974361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968311_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_70610.known	chr3	+	4697	11	FSM	ENSG00000196083.10	ENST00000072516.7	4697	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	5.51361950083609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCATGTGTTTTATG	87	False	NA	NA	False	AATAAA	-27	NA	190514050	190651519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349_190629499_190644247_190644398_190645698_190645843_190648337
transcript_70611.known	chr3	+	2048	9	FSM	ENSG00000196083.10	ENST00000422485.5	2048	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.55512151082224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	15	True	NA	NA	False	AATAAA	-43	NA	190514097	190630285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_190514220_190556129_190556217_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_70614.known	chr3	-	3058	5	FSM	ENSG00000114279.15	ENST00000454309.6	3058	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	16.8874953737966	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAACACAAAA	1199	False	NA	NA	False	NA	NA	NA	192409049	192142508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192408024
transcript_7062.known	chr1	+	1557	10	FSM	ENSG00000143578.16	ENST00000368603.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.4483144552889	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	338	False	NA	17	True	AATAAA	-12	NA	153968236	153974356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153968311_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_70621.known	chr3	-	3063	2	FSM	ENSG00000180611.7	ENST00000392452.3	3063	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTTGTAATC	3	True	NA	0	True	AATAAA	-25	NA	192917856	192796814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_192799651_192917629
transcript_70627.known	chr3	+	969	4	FSM	ENSG00000127252.7	ENST00000264735.4	969	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	-11	True	NA	10	True	AATAAA	-22	NA	193241221	193270855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193241534_193255650_193255790_193262969_193263236_193270603
transcript_70629.known	chr3	+	6429	31	FSM	ENSG00000198836.11	ENST00000361510.8	6429	31	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	107.024197679258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-15	True	NA	17	True	TATAAA	-19	NA	193593207	193697811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70632.known	chr3	+	4087	30	FSM	ENSG00000198836.11	ENST00000392437.6	4087	30	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	115.486820492605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGACATTCAAGCAAAG	-3	True	NA	8	True	AATAAA	-16	NA	193593279	193695652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70633.known	chr3	+	6397	30	FSM	ENSG00000198836.11	ENST00000361908.8	6397	30	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	62.6130558919877	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-37	True	NA	17	True	TATAAA	-19	NA	193593185	193697811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70636.known	chr3	+	6328	29	FSM	ENSG00000198836.11	ENST00000361828.7	6328	29	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	74.8616410862228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	6	True	NA	17	True	TATAAA	-19	NA	193593143	193697811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_70644.known	chr3	-	772	2	FSM	ENSG00000214146.3	ENST00000414309.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCGGGCCACCTCCTCG	NA	False	NA	NA	False	NA	NA	NA	194003636	194001856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_194002577_194003584
transcript_70645.known	chr3	-	840	3	FSM	ENSG00000225742.6	ENST00000415869.6	840	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTGTGTGAGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	194205797	194203017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_194203680_194204818_194204967_194205767
transcript_70647.known	chr3	-	3283	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.0141247721871	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTCTGGTATTTCT	15	True	NA	NA	False	ATTAAA	-18	NA	194672191	194640790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_70658.nic	chr3	-	1763	13	ISM	ENSG00000041802.11	ENST00000265245.10	3283	14	-30	3875	-30	0	5prime_fragment	FALSE	canonical	0	0	junction_3	73.9103717725432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAACAGTGATGAAAT	-15	True	NA	NA	False	NA	NA	NA	194672221	194644665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_70663.known	chr3	+	1101	4	FSM	ENSG00000231770.7	ENST00000447982.7	1125	4	23	1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	7	True	NA	NA	False	AATAAA	-20	NA	194584013	194590249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194584449_194589024_194589143_194589473_194589627_194589854
transcript_70664.known	chr3	+	663	3	FSM	ENSG00000231770.7	ENST00000419571.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	262	False	NA	NA	False	AATAAA	-20	NA	194584298	194590249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194584449_194589024_194589143_194589854
transcript_70665.known	chr3	+	972	2	FSM	ENSG00000229334.1	ENST00000447139.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGGGCCCTGTAATGC	-4	True	NA	NA	False	AATAAA	-23	NA	194632922	194645401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194633168_194644674
transcript_70668.known	chr3	+	905	1	FSM	ENSG00000231770.7	ENST00000666676.1	905	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAATTTGTTTTTAT	-3	True	NA	NA	False	AATGAA	-17	NA	194584003	194584908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_194584000_194584900
transcript_70670.known	chr3	-	3386	6	FSM	ENSG00000184203.8	ENST00000618156.5	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	30.7805133160576	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCCTGTGTGTGGATT	-3	True	NA	-6	True	AATAAA	-15	NA	195543325	195514427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195524818_195524897_195529793_195529902_195542903
transcript_70672.known	chr3	-	839	5	FSM	ENSG00000184203.8	ENST00000438848.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.644127055945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGCAAAACAAATTACGA	-5	True	NA	NA	False	NA	NA	NA	195543353	195516924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195529793_195529902_195542903
transcript_70675.known	chr3	-	1668	2	FSM	ENSG00000184203.8	ENST00000462906.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATAGTTA	6941	False	NA	NA	False	NA	NA	NA	195543386	195528716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_195529902_195542903
transcript_70678.nic	chr3	+	2301	15	NIC	ENSG00000215837.7	novel	2001	15	NA	NA	-57	2958	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	30.3358749028679	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	NA	False	NA	NA	False	AATAAA	-11	NA	195658038	195688862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_70680.known	chr3	+	2131	14	FSM	ENSG00000242086.8	ENST00000429897.5	2131	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	27.4482838083489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	-3	True	NA	NA	False	AATAAA	-11	NA	195658064	195688862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_70682.nnic	chr3	+	2046	13	NIC	ENSG00000242086.8	novel	4208	14	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_12	31.3289003956411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	NA	False	NA	14	True	AATAAA	-16	NA	195658056	195686140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_195658166_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195685817
transcript_70687.nic	chr3	+	1724	8	ISM	ENSG00000242086.8	ENST00000445430.5	4208	14	-38	14242	-23	107	5prime_fragment	FALSE	canonical	3	15	junction_4	37.255324232564	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGACTTTTTTTTTTCCT	NA	False	NA	17	True	AATAAA	-19	NA	195658038	195671898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_70688.known	chr3	+	1439	7	FSM	ENSG00000242086.8	ENST00000453324.5	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	29.4245740080558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCGGATGGTTTCTTGT	5	True	NA	-90	True	ATTAAA	-8	NA	195658072	195671791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_70689.known	chr3	+	1279	6	FSM	ENSG00000242086.8	ENST00000457233.5	1279	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	35.3021245819568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAATCAGCAAAACT	-6	True	NA	NA	False	TTTAAA	-26	NA	195658061	195666682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065
transcript_70692.nnic	chr3	+	1476	6	NIC	ENSG00000242086.8	novel	1439	7	NA	NA	-5	107	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	37.613827244778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGACTTTTTTTTTTCCT	NA	False	NA	17	True	AATAAA	-19	NA	195658056	195671898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_+_195658166_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_70693.nic	chr3	+	1257	5	ISM	ENSG00000242086.8	ENST00000453324.5	1439	7	-34	5010	-23	99	5prime_fragment	FALSE	canonical	3	45	junction_1	27.6631523872461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGCCCTACTAAA	NA	False	NA	NA	False	AATAAA	-4	NA	195658038	195666781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065
transcript_70695.nic	chr3	-	2132	14	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	23.0866646105547	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	NA	False	NA	-15	True	AATAAA	-16	NA	195990303	195963103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_70698.nnic	chr3	-	1885	12	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	21.0560056017476	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	NA	False	NA	-15	True	AATAAA	-16	NA	195990305	195963103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195990189
transcript_70701.nnic	chr3	-	1149	4	NIC	ENSG00000185485.14	novel	548	5	NA	NA	13	700	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	14.1656862405839	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGCCCTACTAAA	-4	True	NA	NA	False	AATAAA	-4	NA	195990292	195981592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_195982311_195984111_195984277_195985626_195985790_195990189
transcript_70702.nnic	chr3	-	999	3	NIC	ENSG00000185485.14	novel	548	5	NA	NA	0	700	combination_of_known_splicesites	FALSE	canonical	3	53	junction_2	8	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGCCCTACTAAA	NA	False	NA	NA	False	AATAAA	-4	NA	195990305	195981592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_195982311_195984111_195984277_195990189
transcript_70704.known	chr3	-	5012	19	FSM	ENSG00000072274.13	ENST00000360110.9	5012	19	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_14	45.1313583461969	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	1	True	NA	-6	True	AATAAA	-16	NA	196082090	196049283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196082042
transcript_70705.known	chr3	-	4814	18	FSM	ENSG00000072274.13	ENST00000420415.5	4814	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	139.613703335917	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-3	True	NA	-6	True	AATAAA	-16	NA	196082094	196049283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196077063_196077123_196082042
transcript_70710.nic	chr3	-	658	4	ISM	ENSG00000163958.14	ENST00000465519.5	1813	8	3862	0	3862	0	3prime_fragment	FALSE	canonical	3	6	junction_3	19.3620476419435	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	3872	False	NA	-1	True	ATTAAA	-20	NA	196207524	196197451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196197726_196198275_196198452_196198788_196198870_196207397
transcript_70711.nic	chr3	-	708	4	ISM	ENSG00000163958.14	ENST00000296326.8	1308	8	3831	0	3817	0	3prime_fragment	FALSE	canonical	3	20	junction_3	14.7044966667419	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	3827	False	NA	-1	True	ATTAAA	-20	NA	196207569	196197451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196197726_196198275_196198452_196198788_196198875_196207397
transcript_70720.known	chr3	-	5597	10	FSM	ENSG00000161217.12	ENST00000292823.6	5597	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	39.0811122325521	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-10	True	NA	-2	True	AATAAA	-21	NA	196287713	196234367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196283474_196283539_196287614
transcript_70722.known	chr3	+	1430	9	FSM	ENSG00000163959.10	ENST00000296327.10	1430	9	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	3.96862696659689	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCACCTTGCCTCT	-3	True	NA	11	True	AATAAA	-23	NA	196216533	196233427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_196216751_196217841_196217937_196226964_196227120_196227663_196227738_196228114_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
transcript_70725.nic	chr3	-	2222	9	NIC	ENSG00000161217.12	novel	5546	9	NA	NA	-1	1064	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	21.6621790224345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTAAATGTCTGCTG	25	True	NA	-30	True	NA	NA	NA	196287678	196237726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287531
transcript_70726.known	chr3	-	5546	9	FSM	ENSG00000161217.12	ENST00000431016.6	5546	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	16.5887763261791	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-23	True	NA	-2	True	AATAAA	-21	NA	196287726	196234367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_70728.nic	chr3	-	1592	9	NIC	ENSG00000161217.12	novel	5546	9	NA	NA	-1	434	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	21.6621790224345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAACTAATTTTTTGCC	25	True	NA	-3	True	TTTAAA	-17	NA	196287678	196238356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287531
transcript_70734.nic	chr3	-	1144	7	ISM	ENSG00000161217.12	ENST00000431016.6	5546	9	-26	7292	0	0	5prime_fragment	FALSE	canonical	3	53	junction_6	16.0831174424198	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTCTCTCTTCTTCGGT	-49	True	NA	3	True	AATAAA	-22	NA	196287752	196241659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_70737.known	chr3	-	800	6	FSM	ENSG00000213123.11	ENST00000446494.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.562118192274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTGTTTTAGGCC	11	True	NA	-2	True	AATAAA	-23	NA	196318299	196291220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196291375_196296005_196296070_196305655_196305774_196306942_196307013_196316097_196316232_196318039
transcript_70739.known	chr3	-	603	5	FSM	ENSG00000213123.11	ENST00000426563.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	174.015085552949	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-4	True	NA	0	True	AATAAA	-25	NA	196318214	196291218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
transcript_70742.nnic	chr3	-	631	4	NIC	ENSG00000213123.11	novel	625	5	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	231.012746161091	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	0	True	NA	0	True	AATAAA	-25	NA	196318310	196291218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318039
transcript_70744.known	chr3	-	10521	11	FSM	ENSG00000163960.12	ENST00000296328.9	10521	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	3.85227205685164	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTTTTGTGTTGTT	8	True	NA	-8	True	AATAAA	-19	NA	196432427	196347661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196407245_196407394_196432326
transcript_70748.known	chr3	-	3158	10	FSM	ENSG00000163960.12	ENST00000429160.1	3158	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	9.15302014516399	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTGTATAAATATTT	8	True	NA	-54	True	NA	NA	NA	196432427	196354876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196432326
transcript_70755.nic	chr3	-	440	2	ISM	ENSG00000163960.12	ENST00000493566.1	921	4	-65	6991	-62	-6991	5prime_fragment	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGGAAATTTTTGTAG	NA	False	NA	NA	False	AATAAA	-29	NA	196432492	196407119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196407394_196432326
transcript_70757.known	chr3	-	5347	6	FSM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.81575680566778	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATTATGTGTATTTT	-6	True	NA	-20	True	AATAAA	-17	NA	196503768	196468782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196488606_196488684_196502872
transcript_70759.nic	chr3	-	1251	4	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-23	15034	-23	-12057	5prime_fragment	FALSE	canonical	3	13	junction_1	4.10960933531265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGTAAGAACAA	-29	True	NA	NA	False	NA	NA	NA	196503791	196483816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196483892_196487398_196487579_196488606_196488684_196502872
transcript_70760.nic	chr3	-	1093	3	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-36	18712	-36	-15735	5prime_fragment	FALSE	canonical	3	19	junction_1	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAAAAAAGACAGGC	29	False	196503833	2	True	AATACA	-27	NA	196503804	196487494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_196487579_196488606_196488684_196502872
transcript_70761.nnic	chr3	-	1157	2	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	-3	-24454	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATTTGTGGTACTTTTC	-9	True	NA	-3	True	AATAAA	-20	NA	196503771	196496213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_196496472_196502872
transcript_70764.nnic	chr3	-	1893	4	NNC	ENSG00000185798.8	novel	1594	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	42.9055810925442	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-3	True	NA	4	True	AATAAA	-25	NA	196568528	196554176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_196554808_196560995_196561492_196566876_196567308_196568193
transcript_70765.nic	chr3	-	1649	4	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	40.185680147148	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-4	True	NA	4	True	AATAAA	-25	NA	196568529	196554176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196554808_196560995_196561492_196566876_196567308_196568438
transcript_70766.known	chr3	-	1594	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	36.7695526217005	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-1	True	NA	4	True	AATAAA	-25	NA	196568554	196554176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
transcript_70769.nic	chr3	-	1587	4	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	34.6538437823121	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-7	True	NA	4	True	AATAAA	-25	NA	196568560	196554176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196554808_196560995_196561492_196566889_196567308_196568518
transcript_7077.known	chr1	-	1353	8	FSM	ENSG00000143545.10	ENST00000614713.4	1353	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	287.996456894305	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTCTCCACTCAAATC	6727	False	NA	0	True	NA	NA	NA	153985366	153981616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153984983
transcript_70772.nnic	chr3	-	1227	3	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	39	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-8	True	NA	4	True	AATAAA	-25	NA	196568618	196554176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr3_-_196554808_196560995_196561492_196568518
transcript_70776.nic	chr3	+	850	2	ISM	ENSG00000174013.8	ENST00000440469.1	3689	3	9103	2401	9054	-2401	3prime_fragment	FALSE	canonical	3	200	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGTAAAAAAGAAAGGACAA	8867	False	NA	NA	False	TTTAAA	-34	NA	196577713	196584886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_196577810_196584132
transcript_70778.nic	chr3	+	3251	2	ISM	ENSG00000174013.8	ENST00000440469.1	3689	3	9103	0	9054	0	3prime_fragment	FALSE	canonical	3	200	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTAATGTCATTTC	8867	False	NA	18	True	ATTAAA	-18	NA	196577713	196587287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_196577810_196584132
transcript_70779.known	chr3	-	683	2	FSM	ENSG00000185798.8	ENST00000429115.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCAAAACTGTTTTTC	-1	True	NA	-7	True	AATAAA	-14	NA	196568581	196554187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196554808_196568518
transcript_7078.known	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_7	33.1003421894884	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	1	True	NA	-33	True	ATTAAA	-20	NA	153986339	153981649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
transcript_70780.known	chr3	-	348	2	FSM	ENSG00000232065.2	ENST00000441644.2	461	2	113	0	113	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTACCACATTTCCAC	7423	False	NA	NA	False	AATAAA	-29	NA	196632587	196631497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196631646_196632387
transcript_70781.known	chr3	-	2158	3	FSM	ENSG00000174007.9	ENST00000409690.5	2158	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTCTACCTGTTC	-5	True	NA	NA	False	AATAAA	-15	NA	196712250	196706276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196707913_196708527_196708728_196711928
transcript_70783.known	chr3	+	6139	15	FSM	ENSG00000180370.10	ENST00000327134.7	6139	15	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_8	21.3432826501856	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGTGCCATCATTTT	-40	True	NA	NA	False	GATAAA	-18	NA	196739856	196832647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781_196807915_196810589_196810654_196812218_196812268_196812738_196812852_196814450_196814569_196818056_196818157_196820370_196820568_196827195_196827334_196828318
transcript_70790.known	chr3	-	1946	4	FSM	ENSG00000114503.11	ENST00000427641.2	1946	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	346.973902316714	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-18	True	NA	10	True	NA	NA	NA	196942560	196935433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937632_196939392_196939433_196942425
transcript_70792.known	chr3	-	676	4	FSM	ENSG00000114503.11	ENST00000422610.5	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	373.161567629299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTACCAAGATTTGATC	1217	False	NA	-99	True	NA	NA	NA	196941906	196936925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941708
transcript_70793.known	chr3	-	1133	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	346.82015832737	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTTCTTTGACAACA	-4	True	NA	50	True	NA	NA	NA	196942440	196936776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
transcript_70794.known	chr3	-	2216	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	363.752968678226	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	746	False	NA	-5	True	AATAAA	-16	NA	196942377	196935405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
transcript_70795.known	chr3	-	2220	4	FSM	ENSG00000114503.11	ENST00000428425.1	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	339.295675710074	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTTGTTGCTGCCTGTT	529	False	NA	-8	True	AATAAA	-13	NA	196942594	196935408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942369
transcript_70796.known	chr3	-	2101	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_2	26.6624996744283	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	14	True	NA	-5	True	AATAAA	-16	NA	196942528	196935405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
transcript_70804.known	chr3	-	1096	3	FSM	ENSG00000114503.11	ENST00000468923.5	1096	3	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATCTTGGCCATGT	19	True	NA	-6	True	ATTAAA	-34	NA	196942523	196936832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_196937649_196939250_196939433_196942425
transcript_70806.known	chr3	+	870	1	FSM	ENSG00000270170.2	ENST00000602845.2	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGTGCTGGGACTTG	-3	True	NA	20	True	AATAAA	-20	NA	196942673	196943543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_196942700_196943500
transcript_70808.known	chr3	-	4436	25	FSM	ENSG00000075711.21	ENST00000657381.1	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_24	68.2118330399255	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATTCCATTTATGAAG	-3	True	NA	45	True	NA	NA	NA	197298623	197042984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_70816.nic	chr3	-	2466	9	ISM	ENSG00000075711.21	ENST00000671246.1	4146	22	102688	-5	4538	0	3prime_fragment	FALSE	canonical	3	26	junction_8	117.310485464855	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	NA	False	NA	-11	True	AATAAA	-7	NA	197081120	197042937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050
transcript_70817.nic	chr3	-	2369	9	ISM	ENSG00000075711.21	ENST00000671246.1	4146	22	102688	92	4538	0	3prime_fragment	FALSE	canonical	3	26	junction_8	117.310485464855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCATTAGTTTCTTAAAT	NA	False	NA	-5	True	ATTAAA	-19	NA	197081120	197043034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050
transcript_70822.nic	chr3	-	1234	5	ISM	ENSG00000075711.21	ENST00000471733.5	2605	17	-23	113346	-23	513	5prime_fragment	FALSE	canonical	3	57	junction_4	90.0038193634026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTAACATCATCTTTAA	-34	True	NA	NA	False	AAAAAG	-1	NA	197298654	197193823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_70823.known	chr3	-	2605	17	FSM	ENSG00000075711.21	ENST00000471733.5	2605	17	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_16	63.0611991937197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	197298631	197080477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_70826.known	chr3	-	3527	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	56.9679465908287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	6	True	NA	-7	True	ATTAAA	-15	NA	197555968	197509782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
transcript_70828.known	chr3	-	3455	7	FSM	ENSG00000161267.12	ENST00000392378.6	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_6	10.899796124495	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197556048	197509782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_70829.known	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	54.0718041126797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	2	True	NA	NA	False	NA	NA	NA	197555972	197512167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
transcript_70834.nnic	chr3	-	1354	9	NNC	ENSG00000214135.9	novel	2435	7	NA	NA	0	-1026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.6857671624822	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCCTGTCTAACTGAAA	NA	False	NA	-17	True	AATAAA	-14	NA	197627908	197612597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_197612780_197613104_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_70836.nic	chr3	-	959	8	FSM	ENSG00000214135.9	ENST00000689716.1	985	8	-15	41	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.2344855372474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGATCCCACAAATAAA	NA	False	NA	-41	True	NA	NA	NA	197627908	197611571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197611623_197613224_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
transcript_70837.nnic	chr3	-	1210	8	NNC	ENSG00000214135.9	novel	2435	7	NA	NA	0	-1026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.932003921321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCCTGTCTAACTGAAA	NA	False	NA	-17	True	AATAAA	-14	NA	197627908	197612597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_-_197612780_197613104_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
transcript_70838.known	chr3	-	1552	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	3	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.3146198811363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	197627906	197614026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_70840.nic	chr3	-	1410	7	FSM	ENSG00000214135.9	ENST00000686003.1	1398	7	-15	3	0	0	multi-exon	FALSE	canonical	3	23	junction_1	31.196509776291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	197627908	197614026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
transcript_70843.nic	chr3	-	1258	5	ISM	ENSG00000214135.9	ENST00000686003.1	1398	7	-15	5150	0	566	5prime_fragment	FALSE	canonical	3	31	junction_2	29.0086194087206	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCTACTAAAACCAACC	NA	False	NA	NA	False	AATAGA	-16	NA	197627908	197619173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_-_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
transcript_70848.known	chr3	+	6733	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_4	18.9962989816438	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTATCAATTGCTA	-32	True	NA	13	True	AATAAA	-17	NA	197749882	197787596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_70866.known	chr3	+	2258	19	FSM	ENSG00000186001.14	ENST00000334859.8	2258	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_16	24.5344932294248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTCTCACTTCTAC	21	True	NA	NA	False	TATAAA	-16	NA	197791273	197871585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324
transcript_70867.nnic	chr3	+	2166	15	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	2	-3509	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_14	45.5904572900774	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTCAGAAGGCTCCC	-16	True	NA	NA	False	AATAAA	-18	NA	197791236	197855930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197855450
transcript_70869.nic	chr3	+	2833	12	ISM	ENSG00000186001.14	ENST00000334859.8	2258	19	-37	22303	2	783	5prime_fragment	FALSE	canonical	3	147	junction_11	21.935291764492	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTAGGCAAAT	-16	True	NA	NA	False	NA	NA	NA	197791236	197849282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871
transcript_70872.known	chr3	-	1981	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	3.78021163428716	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	-20	True	NA	-11	True	AATAAA	-24	NA	197949925	197889076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
transcript_70882.known	chr3	+	1234	5	FSM	ENSG00000182899.17	ENST00000647248.2	1234	5	0	0	0	0	multi-exon	FALSE	canonical	3	8100	junction_1	3310.64397058941	15706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTGTATGGTTTTTT	0	True	NA	11	True	AATAAA	-16	NA	197950189	197956610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197950222_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_70884.known	chr3	+	442	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5802.8209949989	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	16	False	NA	14	True	AATAAA	-25	NA	197950205	197955817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
transcript_70887.known	chr3	+	553	5	FSM	ENSG00000182899.17	ENST00000448864.6	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_1	4873.50471298633	1968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	0	True	NA	48	True	ATTAAA	-18	NA	197950189	197955851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr3_+_197950300_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_709.known	chr1	+	1031	7	FSM	ENSG00000120948.19	ENST00000629725.2	1031	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_6	514.994309569425	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGCCATAGGAATAC	NA	False	NA	NA	False	NA	NA	NA	11012621	11023248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022251_11023192
transcript_70900.known	chr4	+	2872	4	FSM	ENSG00000272602.6	ENST00000610261.6	2872	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	8.05536398239638	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGTTAAATATGTAAA	-19	True	NA	NA	False	AATAAA	-23	NA	53320	88208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53492_59429_59557_60057_60154_85730
transcript_70901.known	chr4	+	747	3	FSM	ENSG00000272602.6	ENST00000502981.2	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAATACGTAAGGTGAG	-11	True	NA	NA	False	NA	NA	NA	53328	60514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53492_59429_59557_60057
transcript_70902.known	chr4	+	1999	2	FSM	ENSG00000272602.6	ENST00000608255.2	1999	2	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTATTATTTTTCTT	NA	False	NA	11	True	AATAAA	-23	NA	53285	87523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53492_85730
transcript_70904.known	chr4	+	1199	5	FSM	ENSG00000250312.8	ENST00000642529.1	1199	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	22.0963797939844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCCTGTCTTGGGTATC	-10	True	NA	NA	False	ATTAAA	-18	NA	124500	202303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_124674_130787_130915_131409_131506_201080_201212_201631
transcript_70908.known	chr4	+	3647	4	FSM	ENSG00000250312.8	ENST00000510175.6	3647	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTGGACATCTGGC	-10	True	NA	NA	False	AATAAA	-22	NA	124500	164162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_124674_130787_130915_131409_131506_160911
transcript_70913.nic	chr4	+	1075	3	ISM	ENSG00000250312.8	ENST00000510175.6	3647	4	-33	32011	-33	-30550	5prime_fragment	FALSE	canonical	3	45	junction_1	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGGAGGCAGAGGTTG	0	True	NA	NA	False	NA	NA	NA	124467	132151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_124674_130787_130915_131409
transcript_70918.nnic	chr4	+	1799	4	Fusion	ENSG00000198155.5_ENSG00000250312.8	novel	3647	4	NA	NA	-36	85	multi-exon	FALSE	canonical	0	0	junction_3	23.3285709425636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATGTTCTTTTCTTTA	-3	True	NA	1	True	AATAAA	-13	NA	124464	254926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr4_+_124674_130787_130915_131409_131506_253559
transcript_70923.known	chr4	+	2598	2	FSM	ENSG00000198155.5	ENST00000356347.3	2598	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGCAAGTTCACA	-19	True	NA	NA	False	TATAAA	-15	NA	212609	255985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_212782_253559
transcript_70924.nnic	chr4	-	713	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-60	51613	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	43.8710230866191	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTTTAAGATGTGGAA	NA	False	NA	-9	True	AATAAA	-24	NA	305534	219061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_219325_295437_295534_296028_296156_305307
transcript_70925.nnic	chr4	-	725	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-60	37665	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	39.6316371938716	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGAATTTATTTGATGA	NA	False	NA	-4	True	AATAAA	-16	NA	305534	233009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_233285_295437_295534_296028_296156_305307
transcript_70926.nnic	chr4	-	1493	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-60	23664	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	25.5081686262787	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTATACTCTTTCCCT	NA	False	NA	-9	True	TTTAAA	-6	NA	305534	247010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_70929.known	chr4	+	12601	4	FSM	ENSG00000131127.14	ENST00000240499.8	12601	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	13.1233464566864	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGATGTCTGTGTGCC	6	True	NA	NA	False	AATAAA	-20	NA	337813	384868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_337987_343781_343909_344334_344431_372663
transcript_70940.known	chr4	-	1679	5	FSM	ENSG00000182903.16	ENST00000515578.5	1679	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	115.813157715348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	87	False	NA	NA	False	NA	NA	NA	474051	425814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_427120_435769_435880_437445_437512_472574_472702_473980
transcript_70942.known	chr4	-	1423	4	FSM	ENSG00000251595.7	ENST00000514396.5	1423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.990299450218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	87	False	NA	NA	False	NA	NA	NA	474051	425814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_426974_437445_437512_472574_472702_473980
transcript_70946.known	chr4	-	1815	3	FSM	ENSG00000251595.7	ENST00000451020.6	1815	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAAATGAGTTTTT	9	True	NA	NA	False	AATAAA	-21	NA	474129	425434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_426974_472574_472702_473980
transcript_70947.known	chr4	-	664	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	29.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-29	True	NA	NA	False	CATAAA	-1	NA	474167	444082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_444433_472574_472702_473980
transcript_70949.nnic	chr4	-	634	3	NNC	ENSG00000251595.7	novel	1815	3	NA	NA	-40	-30236	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	125	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTGGTGATCATGA	-31	True	NA	NA	False	AATAAA	-33	NA	474169	456050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_456369_472574_472702_473980
transcript_70951.known	chr4	+	3019	13	FSM	ENSG00000174227.16	ENST00000504346.5	3019	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	39.4956924514841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGTATCATATTTTC	-6	True	NA	6	True	AATAAA	-16	NA	499236	539528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_499299_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_70955.known	chr4	+	3909	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_11	32.4819394262241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTACATTTTTACA	-33	True	NA	9	True	AATAAA	-20	NA	499209	540200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_7096.known	chr1	-	2427	5	FSM	ENSG00000143570.19	ENST00000310483.10	2427	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	1120.62683351774	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTACAGTATCTGATT	16	True	NA	-14	True	AATAAA	-14	NA	153967712	153959111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153967385
transcript_70970.nic	chr4	+	1907	6	ISM	ENSG00000174227.16	ENST00000506402.5	2387	9	-31	5968	6	-5092	5prime_fragment	FALSE	canonical	3	82	junction_1	18.5256578830551	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGGAATAAA	-16	True	NA	NA	False	NA	NA	NA	499226	516869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972
transcript_70971.known	chr4	+	3203	13	FSM	ENSG00000174227.16	ENST00000310340.9	3203	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	38.3709959908957	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	-22	True	NA	7	True	AATAAA	-17	NA	499220	539529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_70975.known	chr4	+	580	6	FSM	ENSG00000133256.13	ENST00000471824.6	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.5409765834348	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAGCCCAAGAAAATG	56	False	NA	NA	False	NA	NA	NA	663769	670193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_670045
transcript_70977.known	chr4	+	584	7	FSM	ENSG00000215375.6	ENST00000505477.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9930538323682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCCTGCCTGCGAGT	34	False	NA	17	True	AATAAA	-9	NA	673940	682022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_673978_678657_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
transcript_70980.known	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	9537	junction_3	1016.96705944686	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-7	True	NA	-12	True	AATAAA	-21	NA	674276	672435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_672520_673302_673402_673911_673967_674211
transcript_70982.known	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	5763.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-2	True	NA	-14	True	AATAAA	-19	NA	674330	672437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_672520_673302_673402_674211
transcript_70986.known	chr4	+	531	2	FSM	ENSG00000215375.6	ENST00000503612.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGCGAGTCTGCCG	2410	False	NA	23	True	AATAAA	-15	NA	680745	682028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_681141_681892
transcript_70987.known	chr4	-	496	3	FSM	ENSG00000169020.10	ENST00000506525.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5806	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	8144	False	NA	-14	True	AATAAA	-19	NA	673821	672437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_672520_673302_673402_673506
transcript_70989.known	chr4	+	5685	11	FSM	ENSG00000185619.18	ENST00000362003.9	5685	11	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	22.5390771772049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAACAATTCTGAAACTC	-22	True	NA	NA	False	AGTAAA	-1	NA	705764	770640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_705971_730629_730669_730969_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_70991.known	chr4	+	1175	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	26.1661358757205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	-3	True	NA	9	True	AATAAA	-22	NA	705783	734479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_705971_730629_730669_730969_731111_733671
transcript_70992.known	chr4	-	2617	2	FSM	ENSG00000249592.7	ENST00000660016.1	2617	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTCAGGAAGCAAAAGAA	-2	True	NA	NA	False	AAGAAA	-42	NA	781849	760201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_762741_781771
transcript_70993.known	chr4	-	534	2	FSM	ENSG00000249592.7	ENST00000507446.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAAAACGCCCTTCCAG	17	True	NA	NA	False	NA	NA	NA	781830	767140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_767616_781771
transcript_70994.known	chr4	+	1899	1	FSM	ENSG00000185619.18	ENST00000620529.1	1899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAAAGTGTTTCTGGCT	NA	False	NA	10	True	AATAAA	-17	NA	768188	770087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_768200_770100
transcript_7100.known	chr1	-	912	4	FSM	ENSG00000143570.19	ENST00000417348.2	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1062.0136010847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGCTGTGCCTGGCT	4888	False	NA	NA	False	GGGGCT	-33	NA	153963262	153960453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963001
transcript_71001.known	chr4	-	1579	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	1.85472369909914	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGGCTGTCCCCACA	-1	True	NA	-19	True	AATAAA	-23	NA	1172583	1166931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
transcript_71003.nic	chr4	-	2341	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_9	351.906904075215	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-25	True	NA	-19	True	AATAAA	-15	NA	1248731	1211447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
transcript_71008.known	chr4	+	2182	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_4	43.9912988555692	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTGAGCCGAGGCT	-4	True	NA	37	True	AATAAA	-45	NA	1289890	1340137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_7101.known	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	1021.50781799369	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	4688	False	NA	-13	True	AATAAA	-15	NA	153963462	153959110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
transcript_71010.known	chr4	+	1607	9	FSM	ENSG00000090316.16	ENST00000510794.5	1607	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	225.840651787937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGATGCTTCTGAA	NA	False	NA	NA	False	AAAACA	-30	NA	1309442	1339384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1309713_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_71016.known	chr4	+	1001	7	FSM	ENSG00000090316.16	ENST00000509531.5	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	264.426423288849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCGCACGCCTCGGGG	19	True	NA	NA	False	NA	NA	NA	1289913	1339179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_7102.known	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1031.86950079294	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4658	False	NA	-1	True	AATAAA	-27	NA	153963492	153959098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
transcript_71021.known	chr4	-	1810	8	FSM	ENSG00000163950.13	ENST00000489418.6	1810	8	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_7	27.2021907881235	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGCCTTTCTTGTG	-2	True	NA	-5	True	NA	NA	NA	1712319	1692730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
transcript_71022.known	chr4	+	2799	16	FSM	ENSG00000013810.21	ENST00000313288.9	2799	16	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	94.2158278752685	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGCCGCTCTGGTCT	18	True	NA	30	True	AATAAA	-20	NA	1721520	1745171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_71023.known	chr4	-	2803	4	FSM	ENSG00000168936.11	ENST00000382936.8	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	11.0855260988773	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	12	True	NA	-3	True	AATAAA	-17	NA	1721323	1715951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1717429_1717515_1717676_1718151_1718627_1720632
transcript_71024.known	chr4	+	914	2	FSM	ENSG00000013810.21	ENST00000652002.1	914	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACATCACTTCAGACTAA	16	False	NA	NA	False	AAAACA	-2	NA	1712857	1715945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_1713166_1715339
transcript_71026.known	chr4	-	2198	11	FSM	ENSG00000185049.16	ENST00000382882.9	2198	11	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_3	24.7394421925799	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATAGCTGTGTTTGG	-5	True	NA	-12	True	ATTAAA	-21	NA	2008974	1982722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543_1991716_2008749
transcript_71031.known	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	44.3558338891289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	4	True	NA	NA	False	NA	NA	NA	2242121	2228348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
transcript_71036.known	chr4	-	5620	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	61.4750965839014	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-8	True	NA	NA	False	NA	NA	NA	2242133	2228348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
transcript_71039.nic	chr4	+	3044	9	NIC	ENSG00000063978.16	novel	2921	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	360.633123825308	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	-21	True	NA	17	True	AATAAA	-20	NA	2469105	2515857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_2469259_2470986_2471110_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_7104.known	chr1	-	2038	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_3	375.383655596363	2221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-6	True	NA	-12	True	AATAAA	-16	NA	153963537	153959109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
transcript_71040.known	chr4	+	2921	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	312.750666812777	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	-21	True	NA	17	True	AATAAA	-20	NA	2469105	2515857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_71042.known	chr4	+	855	8	FSM	ENSG00000063978.16	ENST00000502316.5	855	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	348.243932803852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGAAGTATTCAGAGC	NA	False	NA	NA	False	AAAAAG	-29	NA	2469096	2513811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2469230_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_71045.known	chr4	+	5522	21	FSM	ENSG00000125386.16	ENST00000637812.2	5522	21	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_1	22.8245481882994	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCGGCTGCTTCTTTCT	-15	True	NA	21	True	AATACA	-15	NA	2536646	2732573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2537171_2596083_2596330_2625261_2625396_2626409_2626578_2630934_2631170_2639734_2639860_2646684_2646833_2657802_2657881_2659557_2659671_2659811_2660055_2662837_2662992_2663108_2663289_2672120_2672373_2689505_2689705_2690697_2690971_2693585_2693875_2694945_2695130_2696362_2696594_2699679_2700545_2716022_2716105_2731774
transcript_71046.known	chr4	-	2006	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	137.505490799459	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	16	True	NA	6	True	AATAAA	-34	NA	2756331	2741647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
transcript_71047.known	chr4	-	1946	6	FSM	ENSG00000168884.15	ENST00000315423.12	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	38.270615359568	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	11	True	NA	6	True	AATAAA	-34	NA	2756336	2741647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2756013
transcript_7105.known	chr1	-	2022	3	FSM	ENSG00000143570.19	ENST00000537590.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	705	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4509	False	NA	-1	True	AATAAA	-27	NA	153963641	153959098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962528_153962748_153963494
transcript_71056.nic	chr4	+	2313	16	NIC	ENSG00000087274.19	novel	4079	16	NA	NA	-26	31	combination_of_known_junctions	FALSE	canonical	3	342	junction_14	236.294787641765	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTCCGTACCC	45	True	NA	NA	False	NA	NA	NA	2843918	2928462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926641_2926676_2928170
transcript_71057.nic	chr4	+	3913	16	NIC	ENSG00000087274.19	novel	4079	16	NA	NA	-26	0	intron_retention	FALSE	canonical	3	342	junction_14	236.294787641765	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	45	True	NA	14	True	AATAAA	-14	NA	2843918	2930062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926641_2926676_2928170
transcript_71058.known	chr4	+	4079	16	FSM	ENSG00000087274.19	ENST00000398125.5	4079	16	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_10	317.423684616563	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	-17	True	NA	25	True	AATAAA	-25	NA	2843856	2930073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926641_2926676_2928170
transcript_71059.nic	chr4	+	2248	15	NIC	ENSG00000087274.19	novel	3107	16	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	599	junction_14	122.586766439622	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTCCAGGCAAGTCC	45	True	NA	NA	False	NA	NA	NA	2843918	2928431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_7106.known	chr1	-	2723	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	0	0	0	multi-exon	FALSE	canonical	3	2202	junction_1	53	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	4675	False	NA	-12	True	AATAAA	-16	NA	153963475	153959109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_153960755_153962219_153962351_153962528
transcript_71060.nic	chr4	+	3879	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-26	0	intron_retention	FALSE	canonical	3	599	junction_14	122.586766439622	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	45	True	NA	14	True	AATAAA	-14	NA	2843918	2930062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_71061.known	chr4	+	4045	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_10	264.053565994261	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	-17	True	NA	25	True	AATAAA	-25	NA	2843856	2930073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_71063.known	chr4	+	546	2	FSM	ENSG00000087274.19	ENST00000540541.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTAGCTTAGGCTGG	25	True	NA	NA	False	ATTAAA	-2	NA	2843988	2876405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_2844025_2875895
transcript_71068.known	chr4	-	1589	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	210.458362205502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTTTGTTTTATACC	6	True	NA	-26	True	AATAAA	-1	NA	2934816	2930582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_7107.known	chr1	+	467	5	FSM	ENSG00000177954.14	ENST00000643794.1	467	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13337.6215552099	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTATTGTCTTGTTT	0	True	NA	16	True	AATAAA	-16	NA	153990762	153992150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153990803_153990913_153991035_153991114_153991224_153991565_153991677_153992064
transcript_71073.nnic	chr4	-	1699	13	NNC	ENSG00000109736.15	novel	1717	13	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_12	193.609339622057	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	7761	False	NA	-10	True	AATAAA	-17	NA	2934677	2930566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934638
transcript_71074.nnic	chr4	-	1702	13	NNC	ENSG00000109736.15	novel	1717	13	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_12	196.162117619302	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	7732	False	NA	-10	True	AATAAA	-17	NA	2934706	2930566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934664
transcript_71075.known	chr4	-	1717	13	FSM	ENSG00000109736.15	ENST00000355443.9	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_12	114.770059975007	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	-3	True	NA	-10	True	AATAAA	-17	NA	2934825	2930566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_71083.nic	chr4	-	1857	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	409	junction_11	117.058931262974	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	-30	True	NA	-4	True	AATAAA	-23	NA	2934852	2930560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_71090.known	chr4	-	1573	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	226.644221867192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGGTTTCTGATGAT	-12	True	NA	15	True	TTTAAA	-4	NA	2934834	2930610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_71102.known	chr4	-	1776	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_8	79.7095351887088	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	8491	False	NA	-4	True	AATAAA	-23	NA	2933947	2930560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_71105.known	chr4	-	2535	17	FSM	ENSG00000087269.16	ENST00000398071.4	2535	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	37.0185236570828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	47	True	NA	-14	True	AATAGA	-18	NA	2963333	2938112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2938328_2939538_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_71108.known	chr4	-	2723	17	FSM	ENSG00000087269.16	ENST00000502735.5	2723	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.493472561931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTATAAATGAAACAAG	24	True	NA	23	True	NA	NA	NA	2963356	2937951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_2938328_2939534_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_71109.known	chr4	+	429	3	FSM	ENSG00000197386.14	ENST00000509618.1	429	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTCTAATAGTCTGCTG	3217	False	NA	NA	False	AATAAA	-20	NA	3160361	3173227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_3160393_3172319_3172398_3172907
transcript_7111.known	chr1	+	352	4	FSM	ENSG00000177954.14	ENST00000651669.1	352	4	0	0	0	0	multi-exon	FALSE	canonical	3	21616	junction_3	3984.7334498893	13492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTGTTTAAGTG	-1	True	NA	21	True	AATAAA	-21	NA	153990761	153992155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153990803_153991114_153991224_153991565_153991677_153992064
transcript_71110.known	chr4	+	455	6	FSM	ENSG00000159788.20	ENST00000507041.5	455	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	13.1362094989384	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCAACGTGGGCTGCT	9235	False	NA	NA	False	AATAGA	-41	NA	3422534	3430447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3430406
transcript_71111.known	chr4	-	10446	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	0	0	0	multi-exon	TRUE	canonical	3	904	junction_4	46.5639783699015	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTCTTTGATCCAT	-1	True	NA	-14	True	NA	NA	NA	3532422	3503611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
transcript_71115.nnic	chr4	+	872	3	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	44.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	AATAAA	-22	NA	3927786	3933044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_3927996_3929642_3929921_3932659
transcript_71117.nnic	chr4	+	583	3	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	10	True	AATAAA	-18	NA	3927642	3933040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_3927695_3927845_3927996_3932659
transcript_71126.known	chr4	-	624	3	FSM	ENSG00000251669.6	ENST00000507301.5	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGCGACACCTGGA	67	False	NA	NA	False	NA	NA	NA	3955363	3942851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_3943373_3953110_3953174_3955323
transcript_7113.known	chr1	+	573	4	FSM	ENSG00000177954.14	ENST00000493224.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	12713.0359342946	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCCTGTTTATTGTCT	0	True	NA	11	True	AATAAA	-11	NA	153990762	153992145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_153991035_153991114_153991224_153991565_153991677_153992064
transcript_71130.nnic	chr4	+	3761	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACAAAGCCTGTTTGGT	NA	False	NA	5	True	AATAAA	-13	NA	3927627	3933035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_3927996_3929642
transcript_71132.nnic	chr4	+	632	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	10	True	AATAAA	-18	NA	3927744	3933040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_3927996_3932659
transcript_71134.known	chr4	-	2276	2	FSM	ENSG00000284727.1	ENST00000641316.1	2276	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAAAATTTCTCTCTT	NA	False	NA	-14	True	NA	NA	NA	4107583	4048210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4050183_4107279
transcript_71135.known	chr4	-	1243	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	42.9592830480212	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-6	True	NA	-6	True	AATAAA	-17	NA	4248223	4235541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_71136.nnic	chr4	-	2083	5	NNC	ENSG00000132406.12	novel	1243	5	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	128.967050055431	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	NA	False	NA	-6	True	AATAAA	-17	NA	4248242	4235541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_4237078_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_71138.known	chr4	-	1554	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	31.6290224592603	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	6	True	NA	0	True	AATAAA	-26	NA	4290154	4267700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_71141.nnic	chr4	-	1527	9	NIC	ENSG00000145220.14	novel	1554	10	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	118.144773477289	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-21	True	NA	0	True	AATAAA	-26	NA	4290181	4267700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4290035
transcript_71143.nic	chr4	-	864	7	ISM	ENSG00000145220.14	ENST00000343470.9	1554	10	-51	6911	-51	-6908	5prime_fragment	FALSE	canonical	3	317	junction_1	20.1197802064425	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAGGAAAAGAGAAA	NA	False	NA	36	True	AATAAA	-24	NA	4290205	4274611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_71146.known	chr4	+	2886	8	FSM	ENSG00000168826.16	ENST00000337872.9	2886	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	8.58332507759989	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	0	True	NA	NA	False	AATAAA	-18	NA	4290250	4321783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_71147.known	chr4	+	2520	7	FSM	ENSG00000168826.16	ENST00000503703.5	2520	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.18021974284601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTCCTCTAGCATTTT	0	True	NA	NA	False	AATAAA	-21	NA	4290250	4321786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4290353_4299926_4300098_4302310_4303092_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_71149.nic	chr4	+	2619	5	NIC	ENSG00000168826.16	novel	2520	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	9.01041064547005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTCCTCTAGCATTTT	-22	True	NA	NA	False	AATAAA	-21	NA	4290228	4321786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_4290353_4299926_4300098_4301988_4303092_4313040_4313115_4320639
transcript_71152.known	chr4	-	2158	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	23.7915951545919	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	3	True	NA	NA	False	AATAAA	-20	NA	4542048	4418967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
transcript_71155.nic	chr4	-	1608	10	NIC	ENSG00000168818.10	novel	2158	11	NA	NA	-15	-140	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	65.4864042057775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGTCAATGAGTCTAA	-12	True	NA	NA	False	AATAAA	-20	NA	4542063	4419473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_4420130_4420863_4420945_4423517_4423588_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
transcript_71158.known	chr4	+	2650	6	FSM	ENSG00000168824.15	ENST00000397958.5	2650	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	95.6460140309046	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	523	False	NA	12	True	AATAAA	-14	NA	4386255	4419058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4386644_4387118_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_7116.known	chr1	-	1111	10	FSM	ENSG00000143549.21	ENST00000368530.7	1111	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2519.86119547178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACCCTGCATTTGTGTC	2624	False	NA	NA	False	ATTAAA	-24	NA	154192076	154167741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154167941_154169304_154169384_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_71162.known	chr4	+	2254	5	FSM	ENSG00000168824.15	ENST00000433139.6	2254	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	51.8814754994497	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTACATGTAACTT	-3	True	NA	-47	True	NA	NA	NA	4386537	4418999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4386644_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_71170.known	chr4	+	4172	9	FSM	ENSG00000168824.15	ENST00000421177.6	4172	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	113.318067292908	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	44	False	NA	12	True	AATAAA	-14	NA	4348139	4419058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4348472_4380982_4381074_4385059_4385202_4385472_4385556_4385856_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_71184.known	chr4	+	1405	3	FSM	ENSG00000247708.8	ENST00000512438.6	1405	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATATATATGTGAAATAT	3	True	NA	-39	True	NA	NA	NA	4542198	4592031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4542476_4544737_4544908_4591073
transcript_71185.known	chr4	+	663	3	FSM	ENSG00000247708.8	ENST00000667824.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGAGCTCTAGCAACC	197	False	NA	NA	False	NA	NA	NA	4542392	4649386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_4542476_4544737_4544908_4648976
transcript_71187.nnic	chr4	-	1130	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	18.2208671582886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	1	True	NA	0	True	AATAAA	-21	NA	5019484	5014585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018356_5019292
transcript_71188.nnic	chr4	-	1118	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	18.2208671582886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	18	False	NA	0	True	AATAAA	-21	NA	5019467	5014585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018361_5019292
transcript_7119.known	chr1	-	1219	9	FSM	ENSG00000143549.21	ENST00000271850.11	1219	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	2242.93288742664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACATTCCAAATAATT	2642	False	NA	NA	False	NA	NA	NA	154192058	154157317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_71190.known	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	8.48528137423857	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-2	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
transcript_71201.known	chr4	+	2049	3	FSM	ENSG00000179010.16	ENST00000320912.8	2049	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	183	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	6285	False	NA	21	True	AATAAA	-21	NA	6640090	6642729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6640709_6640827_6641259_6641729
transcript_71202.known	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	0	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	-4	True	NA	21	True	AATAAA	-21	NA	6640684	6642729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6641259_6641729
transcript_71203.known	chr4	+	1982	1	FSM	ENSG00000179010.16	ENST00000512914.1	1982	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGTTAATAAAAGTATT	25	False	NA	-13	True	AAAACA	-12	NA	6640713	6642695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6640700_6642700
transcript_71204.known	chr4	+	2311	2	FSM	ENSG00000170846.17	ENST00000307533.10	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	2	True	NA	9	True	AATAAA	-16	NA	6673450	6676047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6674707_6674992
transcript_71205.known	chr4	-	406	2	FSM	ENSG00000251580.3	ENST00000513179.1	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGTTTCGAGGTGAACA	277	False	NA	-1	True	AATAAA	-16	NA	6673823	6670727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6670994_6673683
transcript_71206.known	chr4	-	1578	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-7	True	NA	-14	True	AATAAA	-16	NA	6709865	6707700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6708644_6709230
transcript_71207.known	chr4	-	2127	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	31	False	NA	-14	True	AATAAA	-16	NA	6709827	6707700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6707700_6709800
transcript_71208.known	chr4	+	7771	9	FSM	ENSG00000170871.12	ENST00000425103.5	7771	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	5.13413819447821	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGTTCCATCAAGTT	3	True	NA	19	True	AATAAA	-22	NA	6782731	6884170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6876659_6876758_6880786
transcript_71211.known	chr4	+	4149	12	FSM	ENSG00000132405.19	ENST00000451522.6	4149	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	42.5361295142093	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	-1	True	NA	23	True	AATAAA	-20	NA	6987161	7033114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_71212.known	chr4	-	1111	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGAGTGGATCTCATG	1	True	NA	-12	True	ATTAAA	-14	NA	6987036	6985925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_6985900_6987000
transcript_71214.known	chr4	-	2653	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	14.8548533034381	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCCCCTCATTGACT	-4	True	NA	-1	True	AGTAAA	-25	NA	7068064	7058894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
transcript_71218.known	chr4	-	2253	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_17	33.3929110020422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTGGCACACATTCAG	7475	False	NA	NA	False	NA	NA	NA	8428486	8366960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_71219.nnic	chr4	-	2838	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4697	-62	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_17	42.6491277388625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCTCCAACCGCCCCC	4699	False	NA	2	True	AAAAAG	-22	NA	8436026	8366343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
transcript_71221.nnic	chr4	-	2578	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4697	108	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_17	42.6491277388625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGATTCATCTAGATTT	4699	False	NA	-23	True	AGTAAA	-34	NA	8436026	8366603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
transcript_71225.nnic	chr4	-	2470	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4697	0	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_17	42.6491277388625	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	4699	False	NA	-25	True	AAGAAA	-24	NA	8436026	8366711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
transcript_71226.known	chr4	-	2872	18	FSM	ENSG00000087008.16	ENST00000356406.10	2872	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	81.865363348995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATGATCTGTTTGTCC	2	True	NA	-5	True	NA	NA	NA	8440723	8366281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8440647
transcript_7123.known	chr1	-	1248	7	FSM	ENSG00000143549.21	ENST00000509409.5	1248	7	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_6	1897.49929732091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGTGATTCCAGGA	-11	True	NA	NA	False	NA	NA	NA	154183227	154157111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154182987
transcript_71244.nnic	chr4	+	2484	11	NIC	ENSG00000155275.19	novel	770	2	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	24.9951995391115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	-15	True	NA	18	True	AATAAA	-20	NA	8436124	8476555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_8436400_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
transcript_71245.nic	chr4	-	1588	11	ISM	ENSG00000087008.16	ENST00000503233.5	2253	18	2	25232	2	-10639	5prime_fragment	FALSE	canonical	3	233	junction_10	37.1630192530155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCACCCCCGTTCATT	7477	False	NA	-3	True	AATAAA	-17	NA	8428484	8392192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_71249.nic	chr4	-	2446	7	ISM	ENSG00000087008.16	ENST00000503233.5	2253	18	2	37472	2	5849	5prime_fragment	FALSE	canonical	3	233	junction_6	45.4006852615929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGACACATATGCACA	7477	False	NA	NA	False	AAAAAG	-42	NA	8428484	8404432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_71256.nic	chr4	-	1253	4	NIC	ENSG00000087008.16	novel	2253	18	NA	NA	2	-3920	intron_retention	FALSE	canonical	3	233	junction_3	57.5982252813015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAAGCAAGAGGCCTGT	7477	False	NA	NA	False	AAGAAA	-8	NA	8428484	8414201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_8414929_8415765_8416000_8416377_8416536_8428350
transcript_71257.nnic	chr4	+	1997	3	NNC	ENSG00000155275.19	novel	770	2	NA	NA	-1762	983	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	69	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	NA	False	NA	28	True	AATAAA	-17	NA	8434377	8440284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_8434648_8436165_8436400_8438791
transcript_71258.known	chr4	+	770	2	FSM	ENSG00000155275.19	ENST00000532937.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCATTCTTTAAACAC	0	True	NA	NA	False	NA	NA	NA	8436139	8439301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_8436400_8438791
transcript_7126.known	chr1	-	3148	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	4813	junction_2	331.56118036726	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-6	True	NA	-5	True	ATTAAA	-31	NA	154183189	154155307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_71260.nnic	chr4	+	571	2	NNC	ENSG00000155275.19	novel	770	2	NA	NA	-17	-236	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAATAGTTTTCCTGTAA	NA	False	NA	12	True	AGTAAA	-19	NA	8436122	8439065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_8436400_8438771
transcript_71261.nnic	chr4	+	1790	2	NNC	ENSG00000155275.19	novel	770	2	NA	NA	-17	983	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	NA	False	NA	28	True	AATAAA	-17	NA	8436122	8440284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_8436400_8438771
transcript_71262.known	chr4	+	2163	11	FSM	ENSG00000109625.19	ENST00000360986.9	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	32.63571663071	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	-13	True	NA	31	True	ATTAAA	-18	NA	8592764	8619752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_8592922_8599452_8599486_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_71264.known	chr4	+	2136	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	48.297688005397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	-22	True	NA	28	True	ATTAAA	-15	NA	8592755	8619749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_71269.nnic	chr4	-	1787	5	NNC	ENSG00000288075.1	novel	1440	3	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.4791505667086	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCTATACTTTGT	138	False	NA	-13	True	NA	NA	NA	9152252	9034518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_9035546_9064241_9064331_9144727_9144867_9151094_9151267_9151892
transcript_7127.known	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1822.92445016803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	8970	False	NA	0	True	AATAAA	-17	NA	154183130	154158608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_71270.nnic	chr4	-	2189	5	NNC	ENSG00000288075.1	novel	1440	3	NA	NA	-206	0	intron_retention	FALSE	non_canonical	0	0	junction_2	11.842719282327	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCTATACTTTGT	NA	False	NA	-13	True	NA	NA	NA	9152481	9034518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_9035546_9064241_9064331_9144727_9144867_9151094_9151440_9151892
transcript_7128.known	chr1	-	2108	8	FSM	ENSG00000143549.21	ENST00000330188.13	2108	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2415.42781945982	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGACCTATTTGACTT	11	True	NA	-11	True	AATAAA	-17	NA	154183205	154156363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154171412_154171489_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_71286.known	chr4	-	3142	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	363.346190404733	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	22	False	NA	-8	True	ATTAAA	-15	NA	10116949	10074339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
transcript_71292.known	chr4	-	2722	12	FSM	ENSG00000071127.17	ENST00000382451.6	2722	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	526.01500465668	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	22	False	NA	-8	True	ATTAAA	-15	NA	10116949	10074339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_71298.known	chr4	-	1691	12	FSM	ENSG00000071127.17	ENST00000502702.5	1691	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	526.01500465668	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGGAGCATAACTAAAA	20	True	NA	-5	True	AATAAA	-17	NA	10116727	10075148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_71299.known	chr4	-	7160	2	FSM	ENSG00000002587.10	ENST00000002596.6	7160	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGATGTCTCTTTCTT	-8	True	NA	NA	False	GATAAA	-19	NA	11428894	11393149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_11400114_11428698
transcript_71301.nnic	chr4	+	649	3	NNC	ENSG00000249631.7	novel	555	4	NA	NA	36268	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	2	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGCTATTTTTCTTC	NA	False	NA	17	True	AATAAA	-22	NA	11806687	11813958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_11806892_11808627_11808826_11813711
transcript_71302.nic	chr4	+	715	3	ISM	ENSG00000249631.7	ENST00000668579.1	1270	6	99758	0	51797	0	3prime_fragment	FALSE	canonical	2	7	junction_2	1	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGTCTGTGCTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	11822216	11823906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_11822475_11823038_11823209_11823619
transcript_71306.known	chr4	-	1785	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	112.979138403007	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-10	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_71307.known	chr4	-	1787	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	158.384188037847	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	611	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_71309.known	chr4	-	1690	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	41.7708697007323	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-10	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_71311.known	chr4	-	1551	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	134.076992806372	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-1	True	NA	-11	True	AATAAA	-14	NA	13484331	13367723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_71312.nic	chr4	-	1650	6	ISM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	7958	0	-7182	5prime_fragment	FALSE	canonical	3	303	junction_2	26.7132925713024	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTAGTTTTAATTCCC	611	False	NA	3	True	ATTAAA	-19	NA	13484365	13375682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_71315.nic	chr4	-	1631	5	ISM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	12845	0	-12069	5prime_fragment	FALSE	canonical	3	303	junction_1	28.6650920110158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTTCACTATTTAAATT	611	False	NA	NA	False	AAAAAG	-7	NA	13484365	13380569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_71317.known	chr4	-	10567	26	FSM	ENSG00000038219.13	ENST00000040738.10	10567	26	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_24	35.0765106588441	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTGGTAAGAATTTTA	-29	True	NA	-19	True	TATAAA	-21	NA	13627725	13568737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
transcript_71319.known	chr4	+	4989	35	FSM	ENSG00000048342.18	ENST00000506643.5	4989	35	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	7.93403818605105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGCAAAGTGTTCTA	13	False	NA	5	True	AATAAA	-17	NA	15479203	15601549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
transcript_71320.known	chr4	+	3427	15	FSM	ENSG00000048342.18	ENST00000651385.1	3427	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	12.3497087464624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGAGGTTGTTTTTTTT	-9	True	NA	NA	False	AATAAA	-11	NA	15479215	15540276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15538842
transcript_71322.nic	chr4	+	1779	13	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-25	3200	-13	-3200	5prime_fragment	FALSE	canonical	3	14	junction_9	10.2577883689527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGTAAACAAACACTCAG	0	True	NA	NA	False	AATACA	-42	NA	15479190	15537076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919
transcript_71323.nic	chr4	+	1210	9	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-25	23474	-13	5130	5prime_fragment	FALSE	canonical	3	22	junction_6	8.95474734428616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTCTGAATAGCTT	0	True	NA	NA	False	ATTAAA	-15	NA	15479190	15516802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624
transcript_71324.nic	chr4	+	981	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-25	28604	-13	0	5prime_fragment	FALSE	canonical	3	29	junction_5	6.01996677731696	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	0	True	NA	9	True	ATTAAA	-37	NA	15479190	15511672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_71325.known	chr4	+	754	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGATATTC	-9	True	NA	NA	False	AATAAA	-18	NA	15479215	15481713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15479329_15480703_15480828_15481196
transcript_71327.known	chr4	+	1121	8	FSM	ENSG00000048342.18	ENST00000514450.3	1121	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.0165730493417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	31	False	NA	9	True	ATTAAA	-37	NA	15469920	15511672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_71333.known	chr4	-	2837	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	149.142381635805	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-39	True	NA	-1	True	AATAAA	-28	NA	15655382	15605005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
transcript_71334.known	chr4	-	3488	11	FSM	ENSG00000118564.15	ENST00000341285.8	3488	11	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_9	31.8447797919847	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATGTTCTGATTG	-14	True	NA	NA	False	GATAAA	-1	NA	15655357	15604380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15655203
transcript_71337.known	chr4	+	635	4	FSM	ENSG00000237765.8	ENST00000504823.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	23.6971634495683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATTATGAAACCTTAAGT	-7	True	NA	NA	False	AATGAA	-35	NA	15681668	15688694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681785_15686235_15686463_15687000_15687149_15688550
transcript_71340.known	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	11.0252236056942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	23	False	NA	12	True	AATAAA	-14	NA	15681860	15688972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
transcript_71342.known	chr4	+	1136	4	FSM	ENSG00000237765.8	ENST00000505260.5	1136	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	96.6965471059966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAACAAAAATTTAATGAA	-1	True	NA	136	True	AATAAA	-16	NA	15681755	15689096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15686235_15686463_15686931_15687149_15688550
transcript_71346.known	chr4	+	607	4	FSM	ENSG00000237765.8	ENST00000515697.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	71.7975548949189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATCAATAATTGAGCTA	-6	True	NA	NA	False	AAAACA	-34	NA	15681732	15688613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15686235_15686463_15687000_15687149_15688550
transcript_71351.known	chr4	+	578	4	FSM	ENSG00000237765.8	ENST00000503600.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	16.6599986661331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATTGAGCTAAACTTG	-3	True	NA	NA	False	AAAACA	-40	NA	15681834	15688619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681969_15686235_15686463_15687000_15687149_15688550
transcript_71354.known	chr4	+	662	3	FSM	ENSG00000237765.8	ENST00000510920.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTATTGATAAGCCTC	-14	True	NA	NA	False	ATTAAA	-25	NA	15681661	15687312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681785_15686235_15686463_15687000
transcript_71355.known	chr4	+	748	3	FSM	ENSG00000237765.8	ENST00000513053.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTGAACTTATTGAT	10	True	NA	NA	False	ATTAAA	-18	NA	15681805	15687305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15682022_15686235_15686463_15687000
transcript_71356.known	chr4	+	588	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	0	True	NA	-33	True	AATGAA	-2	NA	15681756	15686568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15684849_15684960_15686235
transcript_71358.known	chr4	+	800	3	FSM	ENSG00000237765.8	ENST00000507305.5	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	68.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAACACAGCTGCTGAAA	-5	True	NA	NA	False	NA	NA	NA	15681790	15687462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15686235_15686463_15687000
transcript_71360.known	chr4	+	639	2	FSM	ENSG00000237765.8	ENST00000510032.5	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	-3	True	NA	5	True	AATAAA	-16	NA	15681753	15686606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15682022_15686235
transcript_71361.known	chr4	+	4287	2	FSM	ENSG00000237765.8	ENST00000422728.3	4287	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	-11	True	NA	5	True	AATAAA	-15	NA	15681826	15690447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681902_15686235
transcript_71362.known	chr4	+	1027	2	FSM	ENSG00000237765.8	ENST00000503617.1	1027	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTGGAATTGTGAAT	0	True	NA	NA	False	AATATA	-25	NA	15681756	15687050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_15681969_15686235
transcript_71363.nnic	chr4	-	936	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-59	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	NA	False	NA	-6	True	ATTAAA	-42	NA	15681738	15667563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_15668041_15681279
transcript_71364.nnic	chr4	-	870	2	NNC	ENSG00000118564.15	novel	532	4	NA	NA	-66	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	NA	False	NA	-6	True	ATTAAA	-42	NA	15681745	15667563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_15668041_15681352
transcript_71365.known	chr4	-	1351	3	FSM	ENSG00000137440.5	ENST00000382333.2	1351	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAACATTGCTTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	15938740	15935576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15936653_15938250_15938472_15938686
transcript_71367.known	chr4	-	4021	28	FSM	ENSG00000007062.12	ENST00000447510.7	4021	28	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_25	61.5833159313251	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTATGTTACTTCCT	-8	True	NA	-3	True	AATAAA	-18	NA	16084023	15968227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16035734_16035762_16038945_16039002_16075686_16076119_16083977
transcript_71369.known	chr4	-	4014	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_26	42.5147555311073	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-6	True	NA	-5	True	AATAAA	-16	NA	16083732	15968229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
transcript_71370.known	chr4	-	4349	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_26	28.9711139548859	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTATGTTACTTCCT	NA	False	NA	-3	True	AATAAA	-18	NA	16084378	15968227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_71376.known	chr4	-	2476	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	48.8964147458686	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	341	False	NA	-13	True	AATAAA	-18	NA	16898594	16501540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_7138.known	chr1	-	1678	7	FSM	ENSG00000143612.21	ENST00000368521.10	1678	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	224.485089829048	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-19	True	NA	-19	True	AATAAA	-22	NA	154220590	154206719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_71383.known	chr4	-	2295	8	FSM	ENSG00000169744.13	ENST00000515064.5	2295	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	42.1832735978204	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	4	True	NA	-13	True	AATAAA	-18	NA	16898562	16501540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_16502874_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_71384.known	chr4	-	2626	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	51.4265872633118	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCAAGTGAATCTGGC	22	True	NA	-18	True	AATAAA	-13	NA	16898634	16501545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_71388.nic	chr4	-	1072	7	ISM	ENSG00000169744.13	ENST00000304523.10	2384	8	-134	7107	-101	3337	5prime_fragment	FALSE	canonical	3	101	junction_1	20.7417989148054	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAATTCCACCAGCAGC	-1	True	NA	8	True	NA	NA	NA	16898779	16508647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_71395.known	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_4	33.4265363645911	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-2	True	NA	-3	True	AATAAA	-17	NA	17512090	17486394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_71400.known	chr4	-	1278	6	FSM	ENSG00000151552.12	ENST00000428702.6	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	177.018191155598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATCACATCTTATAT	2	True	NA	-16	True	AATAAA	-24	NA	17512086	17486526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17511949
transcript_71402.known	chr4	-	1374	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	196.33481606684	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGCCTGATTCTGC	-6	True	NA	-6	True	AATAAA	-14	NA	17512069	17486397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_71405.known	chr4	+	1876	13	FSM	ENSG00000002549.13	ENST00000606142.5	1876	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_5	42.9213589667843	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTGTCAGAAACAATAAAT	-3	True	NA	-19	True	NA	NA	NA	17577494	17607934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287_17582394_17583482_17583643_17584971_17585137_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
transcript_71412.known	chr4	+	689	4	FSM	ENSG00000002549.13	ENST00000512397.1	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_3	15.542057635833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTGTAATGCCACCCT	-15	True	NA	NA	False	NA	NA	NA	17577451	17582689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287
transcript_71414.known	chr4	+	10858	4	FSM	ENSG00000118579.13	ENST00000237380.12	10858	4	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_3	60.3342541366198	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGATGGATGTGTT	-1	True	NA	17	True	AATAAA	-30	NA	17614640	17634105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600
transcript_71424.nnic	chr4	-	2927	4	NNC	ENSG00000163257.11	novel	4547	3	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.8219969156552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGTATGGTCATTTG	-3	True	NA	-3	True	AATAAA	-21	NA	17810731	17800657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_17801858_17803433_17804757_17805106_17805226_17810446
transcript_71425.nnic	chr4	-	2976	4	NNC	ENSG00000163257.11	novel	4547	3	NA	NA	-33	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	19.6185852927495	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGTATGGTCATTT	1558	False	NA	-4	True	AATAAA	-20	NA	17810791	17800658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_17801856_17803441_17804757_17805106_17805226_17810446
transcript_7143.known	chr1	-	1610	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_5	117.559176587793	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	5	True	NA	-19	True	AATAAA	-22	NA	154220624	154206719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_71438.nnic	chr4	-	2190	3	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-33	1281	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	13	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTAGTTAAGGGGAC	1558	False	NA	NA	False	NA	NA	NA	17810791	17803030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_17804757_17805106_17805226_17810446
transcript_71439.known	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-29	True	NA	0	True	AATAAA	-24	NA	17810757	17800654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17804772_17805106_17805226_17810446
transcript_7144.nnic	chr1	-	1539	6	NNC	ENSG00000143612.21	novel	1610	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	299.80166777388	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-1	True	NA	-19	True	AATAAA	-22	NA	154220630	154206719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220418
transcript_71440.nnic	chr4	-	2029	3	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-33	1120	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCGCAGCAGTGC	1558	False	NA	NA	False	AATAAA	-5	NA	17810791	17803191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_17804757_17805106_17805226_17810446
transcript_71442.known	chr4	-	757	2	FSM	ENSG00000163257.11	ENST00000507768.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACAGTGGTATGGGCCA	-30	True	NA	NA	False	AATATA	-19	NA	17810758	17804311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17804757_17810446
transcript_71443.nnic	chr4	-	2077	2	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-24	1281	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTAGTTAAGGGGAC	1567	False	NA	NA	False	NA	NA	NA	17810782	17803030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_17804772_17810446
transcript_71444.nnic	chr4	-	1916	2	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-24	1120	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCGCAGCAGTGC	1567	False	NA	NA	False	AATAAA	-5	NA	17810782	17803191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_17804772_17810446
transcript_71445.known	chr4	-	533	2	FSM	ENSG00000163257.11	ENST00000507731.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCATGTTTTAACC	17	True	NA	-8	True	AATAAA	-22	NA	17810711	17809424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_17809693_17810446
transcript_71446.known	chr4	+	4587	21	FSM	ENSG00000109805.10	ENST00000251496.7	4587	21	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_6	45.1622353299745	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTATTCTGAGTATT	-7	True	NA	4	True	AATAAA	-14	NA	17810978	17844865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17840606_17840694_17842309_17842380_17843301
transcript_71459.nic	chr4	+	2886	18	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-28	4664	-28	3040	5prime_fragment	TRUE	canonical	3	304	junction_6	44.6740598815194	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATGGTAATCACATAC	-35	True	NA	10	True	NA	NA	NA	17810950	17840201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070
transcript_71464.known	chr4	+	795	3	FSM	ENSG00000109805.10	ENST00000513226.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	32	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCCTCAGAAGTAACTAT	42	False	NA	NA	False	AAAAAG	-33	NA	17811027	17813346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_17811189_17812220_17812425_17812916
transcript_71466.known	chr4	+	1142	9	FSM	ENSG00000163138.19	ENST00000507634.5	1142	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.39270516579726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTTAAGCACTCAATAA	16	False	NA	-16	True	NA	NA	NA	20700471	20752861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_20700579_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
transcript_71467.known	chr4	+	6309	9	FSM	ENSG00000163138.19	ENST00000503585.6	6309	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	7.8491639682198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTTGTTTCAGTAAA	2	True	NA	NA	False	ATTAAA	-17	NA	20700457	20732557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20724807_20724889_20727284
transcript_71469.known	chr4	+	2073	8	FSM	ENSG00000163138.19	ENST00000360916.9	2073	8	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_5	6.73704349860091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGATTTTGTTGTGCT	-5	True	NA	11	True	ATTAAA	-22	NA	20700412	20728357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
transcript_71479.known	chr4	+	1720	5	FSM	ENSG00000163138.19	ENST00000444671.6	1720	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	9.36416040016402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGCAATTAAAATGTT	18	False	NA	-25	True	NA	NA	NA	20700435	20728321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20713431_20713540_20727284
transcript_71484.known	chr4	-	4577	19	FSM	ENSG00000152990.14	ENST00000334304.10	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_15	34.1971408811387	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-21	True	NA	-1	True	AATAAA	-21	NA	22516066	22387375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
transcript_71491.known	chr4	-	2998	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	1104	junction_5	93.1059077565521	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	-13	True	NA	-28	True	AATAAA	-16	NA	24584554	24527474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_71496.nic	chr4	-	2265	10	ISM	ENSG00000109606.13	ENST00000336812.5	2998	14	-61	12376	-61	-142	5prime_fragment	FALSE	canonical	3	1104	junction_1	103.33381122948	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTTGTAACTGAATTC	NA	False	NA	0	True	AATAAA	-18	NA	24584615	24539850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_7150.known	chr1	-	1163	6	FSM	ENSG00000143612.21	ENST00000368519.5	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	306.234811868279	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTAAAAATCTTCACT	-14	True	NA	NA	False	NA	NA	NA	154220585	154207175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154219835_154219938_154220341
transcript_71500.known	chr4	-	3869	12	FSM	ENSG00000181982.19	ENST00000504487.5	3869	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	7.24654377577441	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACAGCTGTCTTTTGTCT	128	False	NA	-5	True	ATTAAA	-18	NA	24912886	24806116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_24808820_24819858_24819976_24822496_24822574_24831505_24831651_24834947_24835033_24836435_24836509_24837227_24837401_24838155_24838273_24853071_24853180_24873680_24873720_24876535_24876698_24912816
transcript_71501.known	chr4	-	5503	11	FSM	ENSG00000109618.13	ENST00000382103.7	5503	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	6.72606868832009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTACGTTATTTTAC	127	False	25160476	-8	True	AATAAA	-41	NA	25160449	25120013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_71502.known	chr4	-	2072	5	FSM	ENSG00000109618.13	ENST00000681640.1	2072	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	5.80409338312195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATTAAATTTTAAAAC	113	False	NA	NA	False	NA	NA	NA	25160463	25153720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_71503.known	chr4	+	383	2	FSM	ENSG00000281501.1	ENST00000510415.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGTCGGAATACTGG	-16	True	NA	16	True	ATTAAA	-17	NA	25160640	25161687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25160754_25161417
transcript_71505.known	chr4	+	2797	13	FSM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_12	24.0202460899597	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGCTCTCAGTTCTC	-17	True	NA	3	True	ATTAAA	-16	NA	25312773	25370383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021_25365167_25369028
transcript_71506.nic	chr4	+	2391	12	ISM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	4268	0	0	5prime_fragment	FALSE	canonical	3	77	junction_7	21.9058843372059	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTTTCCCATGTGTTT	-17	True	NA	8	True	NA	NA	NA	25312773	25366115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021
transcript_71509.known	chr4	+	1504	9	FSM	ENSG00000168228.16	ENST00000505451.5	1504	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	43.6999713958716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTACAAACATGTGCCA	-6	True	NA	NA	False	NA	NA	NA	25312784	25352541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25352073
transcript_71511.nic	chr4	+	989	7	ISM	ENSG00000168228.16	ENST00000505451.5	1504	9	-11	2856	0	-2856	5prime_fragment	FALSE	canonical	3	94	junction_6	15.4533347713545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	-17	True	NA	NA	False	AATAAA	-17	NA	25312773	25349685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491
transcript_71512.known	chr4	+	938	11	NNC	ENSG00000168228.16	novel	2797	13	NA	NA	23	-2856	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	62.8274621483313	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	27	False	NA	NA	False	AATAAA	-17	NA	25312817	25349685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_25312937_25314045_25314165_25315317_25315394_25333178_25333286_25333286_25333296_25333296_25333303_25333303_25333310_25333310_25333459_25333907_25333989_25345547_25345621_25349491
transcript_71514.known	chr4	+	2599	29	FSM	ENSG00000053900.11	ENST00000510092.5	2599	29	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_18	59.0006377516552	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	-16	True	NA	5	True	AATAAA	-12	NA	25377292	25418489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405623_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_7152.known	chr1	-	1287	6	FSM	ENSG00000143612.21	ENST00000640799.1	1287	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	263.95681464967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAGTGAGATGTCTTCC	-7	True	NA	NA	False	NA	NA	NA	154220636	154207097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_71528.nic	chr4	+	3309	27	NIC	ENSG00000053900.11	novel	2635	29	NA	NA	-22	0	intron_retention	TRUE	canonical	3	277	junction_9	33.0597674651845	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	-4	True	NA	5	True	AATAAA	-12	NA	25377240	25418489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_7153.known	chr1	-	1278	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_5	236.896264217062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAGTTTTTCAGCACA	951	False	NA	5	True	AATAAA	-28	NA	154220533	154211733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_71536.known	chr4	+	935	3	FSM	ENSG00000250317.9	ENST00000506197.3	919	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	510	junction_2	4	464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTGGTGTCTTTTT	-32	True	NA	14	True	ATTAAA	-15	NA	25914203	25929812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_25914423_25928312_25928370_25929153
transcript_71544.known	chr4	+	1878	13	FSM	ENSG00000168214.22	ENST00000679698.1	1878	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	489.509334833248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTGATACTATTCAAAAA	9	True	NA	NA	False	AATGAA	-37	NA	26321021	26431116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26408059_26408175_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71550.known	chr4	+	1843	12	FSM	ENSG00000168214.22	ENST00000512671.6	1843	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	440.039536165138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	393	False	NA	NA	False	NA	NA	NA	26319661	26431181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26319771_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71552.known	chr4	+	1637	12	FSM	ENSG00000168214.22	ENST00000681025.1	1637	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	478.940324790828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTCATACCAGGTGAT	-2	True	NA	NA	False	AAAAAG	-38	NA	26321010	26431104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26412929_26412988_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71557.known	chr4	+	1998	12	FSM	ENSG00000168214.22	ENST00000348160.9	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	323.438729236695	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTGTCTCCCTGCAAG	-21	True	NA	NA	False	NA	NA	NA	26320806	26431136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71558.known	chr4	+	2136	12	FSM	ENSG00000168214.22	ENST00000505958.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	385.928161002207	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTTTTTGCTAGGACT	143	False	NA	NA	False	NA	NA	NA	26321364	26431009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321872_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71561.known	chr4	+	1682	11	FSM	ENSG00000168214.22	ENST00000345843.8	1682	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	364.370964814706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAAAATGAACAATCG	441	False	NA	NA	False	AAAAAG	-12	NA	26319709	26431066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26319889_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71564.known	chr4	+	5395	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	227.113385778998	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	1	True	NA	23	True	AATAAA	-29	NA	26321013	26434923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71567.known	chr4	+	1678	11	FSM	ENSG00000168214.22	ENST00000509158.6	1678	11	0	0	0	0	multi-exon	TRUE	canonical	2	31	junction_9	449.206422483027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCCCTGCAAGTGCT	102	False	NA	NA	False	NA	NA	NA	26320974	26431140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26430418_26430523_26430691
transcript_71569.known	chr4	+	2169	11	FSM	ENSG00000168214.22	ENST00000681484.1	2169	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	359.70493463393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAAATGCAGAAGCC	77	False	NA	NA	False	NA	NA	NA	26321298	26431159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321872_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71587.known	chr4	+	1766	13	FSM	ENSG00000168214.22	ENST00000681679.1	1766	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	485.862949354605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGGTTTCTTGGGA	-2	True	NA	NA	False	AAAAAG	-29	NA	26321010	26431083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26422131_26422157_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_71590.known	chr4	+	2967	21	FSM	ENSG00000109680.11	ENST00000264866.9	2967	21	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	6.07947366142827	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTATAATCCTATGCT	-12	True	NA	NA	False	AATAAA	-27	NA	26584083	26756223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26584293_26613168_26613242_26614407_26614454_26620612_26620689_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_71597.known	chr4	+	1386	18	FSM	ENSG00000109680.11	ENST00000511789.5	1386	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.285550779959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACAGTCACTGGC	98	False	NA	NA	False	NA	NA	NA	26584193	26754947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_26584293_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_716.known	chr1	+	4185	6	FSM	ENSG00000120948.19	ENST00000240185.8	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1258	junction_4	85.7983682828526	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	-5	True	NA	11	True	AATAAA	-20	NA	11012653	11025492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_7160.known	chr1	-	1551	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	310.170416867889	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	10	True	NA	-19	True	AATAAA	-22	NA	154220619	154206719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
transcript_71600.known	chr4	+	6403	2	FSM	ENSG00000169851.15	ENST00000361762.3	6403	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGCCATTGGTTTATTG	35	False	NA	4	True	ATTAAA	-18	NA	30720414	30732973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_30724597_30730752
transcript_71604.known	chr4	+	3211	14	FSM	ENSG00000169299.14	ENST00000381967.9	3211	14	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	19.9520134381642	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTGCATTTTTTTT	-18	True	NA	10	True	AAGAAA	-13	NA	37826685	37862937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201_37847296_37848521_37848652_37850183_37850374_37855607_37855742_37861509
transcript_71612.nic	chr4	+	1119	7	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	27	-14101	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	9.37638878602347	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGCTGAGGTCAGAA	0	True	NA	14	True	ATTAAA	-26	NA	38867777	38915182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920
transcript_71614.nic	chr4	+	1624	6	ISM	ENSG00000109790.18	ENST00000261426.10	3300	10	34412	373	-6463	-373	3prime_fragment	FALSE	canonical	3	155	junction_1	23.5762592452662	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTTTCACCTAATTAGT	4983	False	NA	15	True	AATAAA	-15	NA	39096851	39121833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
transcript_71617.known	chr4	+	909	5	FSM	ENSG00000109790.18	ENST00000515612.1	909	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	74.8665479369792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACTAGAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	39103314	39126857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39126693
transcript_71618.known	chr4	+	2513	14	FSM	ENSG00000157796.18	ENST00000506503.1	2513	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.1237019515407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAGTATAGTA	28	False	NA	NA	False	AATAAA	-19	NA	39182547	39219133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217986
transcript_71619.known	chr4	+	2676	6	FSM	ENSG00000157796.18	ENST00000512534.5	2676	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	14.9130815058458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGACGTTTTTCTG	NA	False	NA	12	True	AATAAA	-13	NA	39270052	39285809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39270101_39272979_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_71620.known	chr4	+	4395	37	FSM	ENSG00000157796.18	ENST00000399820.8	4395	37	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_12	13.0373099455863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	9	True	NA	13	True	AATAAA	-14	NA	39182528	39285810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_71623.known	chr4	-	4886	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	51.7984207180961	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-11	True	NA	-7	True	AATAAA	-19	NA	39366375	39287455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_71629.nic	chr4	-	1783	13	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-18	21434	-18	-2256	5prime_fragment	FALSE	canonical	3	227	junction_1	25.9647196531499	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACAGATGTGTTTTGGA	-29	True	NA	NA	False	AATAAA	-4	NA	39366393	39308889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_71630.nic	chr4	-	1688	13	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-18	21529	-18	-2351	5prime_fragment	FALSE	canonical	3	227	junction_1	25.9647196531499	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGAAAAATTAGTCC	-29	True	NA	NA	False	AAGAAA	-40	NA	39366393	39308984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_71633.known	chr4	-	1255	10	FSM	ENSG00000035928.17	ENST00000418436.5	1255	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	120.274685615885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAAATGCCA	2	True	NA	NA	False	TATAAA	-21	NA	39366362	39320464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39355876_39355998_39366238
transcript_71634.nic	chr4	-	1170	9	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-18	33004	-18	0	5prime_fragment	FALSE	canonical	3	275	junction_3	18.9208879284245	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATGCCATTAAA	-29	True	NA	NA	False	TATAAA	-26	NA	39366393	39320459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_71637.nnic	chr4	-	1092	8	NIC	ENSG00000035928.17	novel	1255	10	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	101.298508158324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATGCCATTAAA	-29	True	NA	NA	False	TATAAA	-26	NA	39366393	39320459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_39320670_39321286_39321375_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_7164.known	chr1	-	872	5	FSM	ENSG00000143612.21	ENST00000368516.1	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_4	130.417598505723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAGCACTTTGGGA	1	True	NA	78	True	NA	NA	NA	154220628	154212132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_71640.nic	chr4	-	580	5	ISM	ENSG00000035928.17	ENST00000504849.5	873	6	-58	4457	-18	-52	5prime_fragment	FALSE	canonical	3	278	junction_1	19.4422220952236	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGAAGAAAACACTAAGA	-29	True	NA	NA	False	NA	NA	NA	39366393	39327659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_71644.nic	chr4	-	262	2	ISM	ENSG00000035928.17	ENST00000503784.1	504	5	-44	23762	-18	-23762	5prime_fragment	FALSE	canonical	3	332	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAATAAAGGAAATCA	-29	True	NA	NA	False	AAGAAA	-14	NA	39366393	39351369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_39351477_39366238
transcript_71649.known	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_7	1325.20159421355	13096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	5	True	NA	-6	True	AATAAA	-31	NA	39458922	39454123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_71651.known	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	2730.76545297901	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	4	True	NA	-72	True	NA	NA	NA	39458923	39452586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
transcript_71654.known	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	5878	junction_3	980.516360563827	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-5	True	NA	-19	True	AATAAA	-18	NA	39458888	39454136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
transcript_71655.known	chr4	-	772	7	FSM	ENSG00000163682.17	ENST00000503277.6	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_6	1396.90555832844	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAACCGGTTATCCTT	33	False	NA	-14	True	AATAAA	-23	NA	39458894	39454131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458441_39458890
transcript_71663.known	chr4	+	3572	11	FSM	ENSG00000121897.15	ENST00000640888.2	3572	11	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_7	18.8374626741501	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	39459055	39479506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_71665.known	chr4	+	2259	11	FSM	ENSG00000121897.15	ENST00000640381.1	2259	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	27.2169065104762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCGGGAGGCTAAGGC	5	True	NA	NA	False	AAAACA	-42	NA	39459057	39477414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39468428_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_71666.known	chr4	+	1578	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	29.9481032602883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	10	True	NA	10	True	ATTAAA	-25	NA	39459062	39477648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_71673.known	chr4	+	1258	8	FSM	ENSG00000121897.15	ENST00000261434.8	1258	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	36.9428681913584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATAAAAAGGAAAAAAAA	-6	True	NA	-40	True	NA	NA	NA	39459086	39477532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39463524_39463606_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_71675.known	chr4	+	826	7	FSM	ENSG00000121897.15	ENST00000513731.6	826	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33.6670792053932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAGTTAATAACAGAGGT	13	True	NA	NA	False	TTTAAA	-7	NA	39459065	39477160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_71676.known	chr4	+	1011	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	6.23609564462324	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAAGTTTTTAA	5	True	NA	NA	False	NA	NA	NA	39459057	39464163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
transcript_71678.known	chr4	+	1005	3	FSM	ENSG00000121897.15	ENST00000509519.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	46	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGAGGATCACTTGAGC	-8	True	NA	NA	False	NA	NA	NA	39459044	39464238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39459163_39460789_39460963_39463524
transcript_71683.known	chr4	-	3037	12	FSM	ENSG00000109814.12	ENST00000316423.11	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_1	89.1158592150486	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	-1	True	NA	0	True	AATAAA	-21	NA	39527439	39498754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39521350_39521520_39527282
transcript_71689.known	chr4	-	2826	11	FSM	ENSG00000109814.12	ENST00000501493.6	2826	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	344.615495879103	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTATATGGGTGTAAT	1	True	NA	-8	True	AATAAA	-13	NA	39527437	39498762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39514082_39514185_39521350_39521520_39527282
transcript_71692.known	chr4	-	6252	5	FSM	ENSG00000163683.12	ENST00000295958.10	6252	5	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	60.6315718087532	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATACTTGTTTCTTAA	-1	True	NA	NA	False	AATAAA	-13	NA	39638865	39546335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
transcript_71695.known	chr4	-	830	4	FSM	ENSG00000163683.12	ENST00000511809.5	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	255.241497845124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTATTTGTGGATGG	193	False	NA	NA	False	AAGAAA	-32	NA	39638893	39551642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39552159_39572414_39572464_39605070_39605181_39638738
transcript_71696.known	chr4	-	680	4	FSM	ENSG00000163683.12	ENST00000507613.5	680	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	227.779620588751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTGTGATTATAATTT	241	False	NA	NA	False	GGGGCT	-44	NA	39638845	39551838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_39552159_39556427_39556571_39605070_39605181_39638738
transcript_71700.nic	chr4	+	1171	2	FSM	ENSG00000249348.2	ENST00000685788.1	1176	2	3	2	3	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTTGGGTATGT	-15	True	NA	9	True	AATAAA	-18	NA	39527722	39532523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39528339_39531968
transcript_71701.known	chr4	+	2615	4	FSM	ENSG00000255458.8	ENST00000667934.1	2615	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGATCTTTGCATTTG	NA	False	NA	-11	True	AATAAA	-4	NA	39639106	39653515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39639295_39641693_39641793_39650376_39650455_39651265
transcript_71702.nic	chr4	+	418	3	FSM	ENSG00000255458.8	ENST00000693190.1	393	3	-25	0	8	0	multi-exon	FALSE	canonical	2	3	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTATTTTTTGCCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	39639114	39650515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39639295_39641693_39641793_39650376
transcript_71704.known	chr4	+	5153	7	FSM	ENSG00000078140.14	ENST00000261427.10	5153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	355.845823356127	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATATCTTATTTCTG	3	True	NA	24	True	AATAAA	-25	NA	39698135	39782792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_71706.known	chr4	+	2262	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	446.105244184474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGTAATGTTAAAG	6	True	NA	8	True	AATAAA	-14	NA	39698138	39779992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_71710.known	chr4	+	2175	6	FSM	ENSG00000078140.14	ENST00000445950.2	2175	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	448.597547920182	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	9	True	NA	-1	True	AATAAA	-5	NA	39698175	39779983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39778359
transcript_71719.known	chr4	+	891	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	405.015431804765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGTGTTTAGCAGTGT	-4	True	NA	109	True	AAGAAA	-7	NA	39698162	39778710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_71720.known	chr4	+	566	4	FSM	ENSG00000078140.14	ENST00000510719.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	460.029226124698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTAATTTTT	161	False	NA	32	True	AATAAA	-31	NA	39698327	39778633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_39698391_39774833_39774934_39777681_39777811_39778359
transcript_71725.known	chr4	+	9747	19	FSM	ENSG00000078177.14	ENST00000511480.5	9747	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	36.4034322082851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGTGTGAGGAAATCC	48	True	NA	13	True	AATAAA	-14	NA	40056912	40158251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40100035_40100127_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
transcript_71726.known	chr4	+	9720	18	FSM	ENSG00000078177.14	ENST00000261435.11	9720	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	26.8941279398879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTGTGAGGAAATCCT	-15	True	NA	14	True	AATAAA	-15	NA	40056849	40158252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
transcript_71727.nic	chr4	+	1976	8	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	-9	17486	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	31.3856850250205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGAAATAAGTGAT	39	True	NA	NA	False	TTTAAA	-6	NA	40056903	40120092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_40057031_40073454_40073552_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_71730.known	chr4	+	1157	1	FSM	ENSG00000260296.1	ENST00000567102.1	1157	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACTCATCTAACTAGAG	NA	False	NA	11	True	AATAAA	-16	NA	40166674	40167831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40166700_40167800
transcript_71734.known	chr4	+	2268	4	FSM	ENSG00000168421.13	ENST00000610353.4	2268	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.6707311029399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGGCAACAGAACTT	194	False	NA	NA	False	NA	NA	NA	40196906	40244764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40197301_40235192_40235359_40242713_40242835_40243177
transcript_71736.known	chr4	+	4181	3	FSM	ENSG00000168421.13	ENST00000381799.10	4181	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGGTAGTTCATTCTT	-15	True	NA	NA	False	ATTAAA	-35	NA	40197030	40246967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40197301_40242713_40242835_40243177
transcript_71741.known	chr4	-	8972	18	FSM	ENSG00000163697.17	ENST00000295974.12	8972	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	99.9181672090131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTCTATGAATGTT	-7	True	NA	-2	True	AATAAA	-20	NA	41214618	40810026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945071_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
transcript_71743.known	chr4	-	1681	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_6	49.9357921067978	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCATTTTGGGTGGGA	-14	True	NA	-28	True	AATAAA	-4	NA	40857155	40815332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
transcript_71746.nic	chr4	-	1620	7	NIC	ENSG00000163697.17	novel	1681	7	NA	NA	0	-57	combination_of_known_junctions	FALSE	canonical	3	69	junction_6	80.2982288444493	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTTTTCCGATGGTT	NA	False	NA	-23	True	ATTAAA	-16	NA	40857192	40815389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_71758.known	chr4	+	1759	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	29.5472502950782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	19	True	NA	NA	False	AATAAA	-7	NA	40749963	40775456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
transcript_71760.nic	chr4	+	1257	4	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	79	13735	79	-13735	5prime_fragment	FALSE	canonical	3	207	junction_2	22.3954360429878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTACTTAAGAACAAACTA	48	False	NA	NA	False	AGTAAA	-11	NA	40750042	40761721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170
transcript_71764.known	chr4	+	748	9	FSM	ENSG00000154277.13	ENST00000505232.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	978.7329819721	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTCAACATGAAAATAT	2	True	NA	-29	True	NA	NA	NA	41256931	41268108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263228_41263292_41264102_41264162_41267986
transcript_71770.nic	chr4	+	1201	10	ISM	ENSG00000064042.18	ENST00000512820.5	5071	26	-50	52835	-20	25891	5prime_fragment	FALSE	canonical	1	6	junction_1	3.89998417217428	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAAAAATGGAGAA	-3	True	NA	NA	False	AAGAAA	-7	NA	41360764	41646185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_41360937_41494535_41494607_41524408_41524479_41598919_41599027_41603874_41603906_41605893_41606005_41613465_41613662_41619187_41619441_41644499_41644627_41646122
transcript_71774.known	chr4	+	1092	8	FSM	ENSG00000109133.13	ENST00000513702.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	82.1775082193593	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTTGCTAATGGTTA	-26	True	NA	-37	True	AAAAAG	-20	NA	41935128	41954395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41935263_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_71778.known	chr4	+	867	8	FSM	ENSG00000109133.13	ENST00000508448.5	867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.119448461425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCACTGTTTGTGAGA	-26	True	NA	106	True	AATGAA	-38	NA	41935128	41954122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41935311_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_7178.known	chr1	+	3411	25	FSM	ENSG00000143569.19	ENST00000343815.10	3411	25	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	264.994886612092	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	NA	False	NA	27	True	AATAAA	-23	NA	154220178	154263505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154220245_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_71784.known	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	25.2151850192608	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	0	True	NA	19	True	AAAAAG	-29	NA	41935428	41960803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_71789.known	chr4	+	1570	6	FSM	ENSG00000109133.13	ENST00000264452.9	1570	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	115.040166898349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGGGTCACCTAG	-26	True	NA	69	True	TTTAAA	-34	NA	41935128	41954857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41935530_41938601_41938697_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_7179.known	chr1	+	3451	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	294.636496263711	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	543	False	NA	27	True	AATAAA	-23	NA	154220848	154263505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_71793.known	chr4	+	6164	18	FSM	ENSG00000014824.14	ENST00000264451.12	6164	18	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_17	66.8171600112749	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTTTGGGATTTTT	9	True	NA	17	True	AATAAA	-27	NA	41990529	42090461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
transcript_71796.nic	chr4	+	2359	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-49	11610	-21	0	5prime_fragment	FALSE	canonical	3	548	junction_16	52.3305300470003	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACATTTGAATTCTGT	8715	False	NA	-35	True	TTTAAA	-28	NA	41990480	42078851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_71797.nic	chr4	+	2417	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-49	11552	-21	58	5prime_fragment	FALSE	canonical	3	548	junction_16	52.3305300470003	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTTGAAGGCAGT	8715	False	NA	23	True	AATAAA	-25	NA	41990480	42078909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_71806.nic	chr4	+	802	7	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-49	55166	-21	14520	5prime_fragment	FALSE	canonical	3	581	junction_6	56.8460396353363	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAGAGAATACAGAGAT	8715	False	NA	NA	False	NA	NA	NA	41990480	42035295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274
transcript_71808.nnic	chr4	-	1117	2	FSM	ENSG00000289643.1	ENST00000685812.1	1117	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTTCTGGTCTATGTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	42292644	42285822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_42286402_42292106
transcript_71812.known	chr4	+	4460	17	FSM	ENSG00000151806.14	ENST00000281543.6	4460	17	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_9	29.0688837074973	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTATCACTGCCAA	-27	True	NA	3	True	ATTAAA	-15	NA	44678419	44700928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
transcript_71816.nnic	chr4	-	1109	7	NNC	ENSG00000163281.12	novel	5382	6	NA	NA	-30	9169	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	19.5909559632897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCATGTTTGTTAAAC	0	True	NA	NA	False	AATAAA	-18	NA	44726618	44692625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_44692786_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_71817.known	chr4	-	2235	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	15.0296004234607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTATAAATGTTTTT	12	True	NA	NA	False	NA	NA	NA	44726556	44701794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_71821.known	chr4	-	1050	6	FSM	ENSG00000163281.12	ENST00000507534.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	21.3766227454198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGTGTCCACATCAGG	-3	True	NA	NA	False	TATAAA	-42	NA	44726523	44702787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44726473
transcript_71823.known	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	10.8185026690388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	23	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_71829.known	chr4	-	1461	5	FSM	ENSG00000169019.11	ENST00000381571.6	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	21.1113121335458	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTTTTATTTTTAT	-23	True	NA	66	True	AATGAA	-3	NA	47463702	47450786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_47451666_47453058_47453215_47456576_47456730_47460143_47460300_47463585
transcript_71832.known	chr4	+	616	1	FSM	ENSG00000242262.1	ENST00000487352.1	616	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTAAAGTTTGTAAAA	40	False	NA	-42	True	NA	NA	NA	47706371	47706987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_47706400_47707000
transcript_71833.known	chr4	-	2664	23	FSM	ENSG00000170448.12	ENST00000507131.5	2664	23	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_22	17.0230762192661	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCGTCGGAAGAAGAACAG	-7	True	NA	NA	False	AAAACA	-9	NA	47914616	47848303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_71834.known	chr4	-	3723	23	FSM	ENSG00000170448.12	ENST00000329043.7	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	23.110764548507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAATATTTATTATTAG	NA	False	NA	10	True	ATTAAA	-23	NA	47914667	47847232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
transcript_71835.known	chr4	-	3880	23	FSM	ENSG00000170448.12	ENST00000507489.2	3880	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	24.8107298169479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCTAGAATATTTA	-3	True	NA	3	True	ATTAAA	-16	NA	47914583	47847239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914364
transcript_71846.known	chr4	-	3661	18	FSM	ENSG00000135605.13	ENST00000381501.8	3661	18	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_8	5.85877628140646	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATCTGCCACATTCCT	-17	True	NA	NA	False	AGTAAA	-20	NA	48269838	48135782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
transcript_7185.known	chr1	+	842	7	FSM	ENSG00000143575.15	ENST00000447768.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	243.575735427174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTATTCCTGGGACGT	-15	True	NA	NA	False	NA	NA	NA	154272619	154275663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273335_154273535_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_71851.nic	chr4	-	1973	2	ISM	ENSG00000075539.15	ENST00000505437.5	443	3	-8	74506	-4	-62955	5prime_fragment	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAAAAAACACACGA	5	True	NA	NA	False	AAAACA	-5	NA	48780275	48708923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_48710699_48780077
transcript_7186.known	chr1	+	1151	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	241.363775704272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	-26	True	NA	27	True	AATAAA	-16	NA	154272608	154275873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_71861.nic	chr4	+	1281	9	NIC	ENSG00000109180.15	novel	1204	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	252.680999483539	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCATCTTCCTTGATT	NA	False	NA	30	True	AATAAA	-20	NA	48831001	48861249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_48831053_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_71868.known	chr4	+	1958	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	86.499187134909	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	10	True	NA	2	True	AATAAA	-17	NA	48831087	48861815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_7187.known	chr1	+	1109	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_4	39.5281193863586	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-6	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_71875.known	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	255.255141965838	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	17	True	NA	31	True	AATAAA	-21	NA	48831341	48861250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_71881.known	chr4	+	1756	8	FSM	ENSG00000109180.15	ENST00000444354.6	1756	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	258.261218813157	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAACAATAAAAATTTGG	-14	True	NA	-27	True	AGTAAA	-44	NA	48831107	48861786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
transcript_71882.known	chr4	+	1306	8	FSM	ENSG00000109180.15	ENST00000396448.6	1306	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	270.765505897028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTCATCTTCCTTGAT	-13	True	NA	29	True	AATAAA	-19	NA	48831064	48861248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48852021_48860724
transcript_71889.known	chr4	+	496	5	FSM	ENSG00000109180.15	ENST00000507546.5	496	5	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	112.828409542987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAACAATTAATTTAAAAT	0	True	NA	NA	False	NA	NA	NA	48831222	48848669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398
transcript_7189.known	chr1	+	914	7	FSM	ENSG00000143575.15	ENST00000457918.6	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	216.725633001729	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGCTTGGATATGTG	1801	False	NA	-62	True	NA	NA	NA	154272588	154275784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273479_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_71891.known	chr4	+	1594	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	214.2782945144	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	6	True	NA	-19	True	ATTAAA	-25	NA	48831083	48861200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_71892.known	chr4	-	1109	7	FSM	ENSG00000145247.12	ENST00000508632.6	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	1999	junction_2	191.250925923685	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGACTCCATCACACACA	38	False	48906796	NA	False	NA	NA	NA	48906774	48885018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_71895.known	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	812.464497685899	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	NA	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
transcript_71897.known	chr4	-	1886	6	FSM	ENSG00000145247.12	ENST00000514576.5	1886	6	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_4	188.05467290126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	-2	True	NA	NA	False	AATAAA	-22	NA	48906798	48885381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48892771_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_71898.known	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.695312682792	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	24	False	NA	NA	False	AATAAA	-16	NA	48906788	48885387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_71903.known	chr4	-	459	4	FSM	ENSG00000145247.12	ENST00000506226.6	459	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	1090.4990702528	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCTAATGGAACAAAAACA	38	False	48906796	NA	False	AATAAA	-4	NA	48906774	48885399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_48885566_48894005_48894054_48904483_48904612_48906657
transcript_71907.known	chr4	+	4222	11	FSM	ENSG00000109184.15	ENST00000334635.10	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_8	69.7352851861954	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	4	True	NA	18	True	AATAAA	-25	NA	51843152	51916837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_71916.known	chr4	+	4207	10	FSM	ENSG00000109184.15	ENST00000381441.7	4207	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	102.710788979734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	NA	False	NA	18	True	AATAAA	-25	NA	51843062	51916837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51913289_51913393_51913528
transcript_7192.known	chr1	+	1284	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_3	38.8978148486518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-6	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_71929.nnic	chr4	-	1346	7	NNC	ENSG00000163069.13	novel	4248	6	NA	NA	-1	-2990	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	297.604136769337	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTTTTTAAAATTCCA	-17	True	NA	-1	True	AATAAA	-20	NA	52038300	52023695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031874_52031962_52033430_52033641_52038226
transcript_71933.known	chr4	-	4248	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_4	76.8130197297307	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	-16	True	NA	-26	True	AATAAA	-15	NA	52038299	52020705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
transcript_71937.nnic	chr4	-	1048	5	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	0	-2990	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	288.630386480703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTTTTTAAAATTCCA	-16	True	NA	-1	True	AATAAA	-20	NA	52038299	52023695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52038226
transcript_71939.nic	chr4	-	757	3	ISM	ENSG00000163069.13	ENST00000506357.5	663	5	-55	2718	-1	-2660	5prime_fragment	FALSE	canonical	3	109	junction_1	232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAACAATTAAGAA	-17	True	NA	NA	False	GATAAA	-34	NA	52038300	52031488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_52031962_52033430_52033641_52038226
transcript_7194.known	chr1	-	1514	2	FSM	ENSG00000286391.2	ENST00000666466.2	1528	2	14	0	11	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	NA	False	NA	NA	False	NA	NA	NA	154567735	154564854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154566183_154567549
transcript_71940.nic	chr4	-	2226	2	ISM	ENSG00000163069.13	ENST00000381431.10	4248	6	-1	10783	-1	-2660	5prime_fragment	FALSE	canonical	3	573	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAACAATTAAGAA	-17	True	NA	NA	False	GATAAA	-34	NA	52038300	52031488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_52033641_52038226
transcript_71942.known	chr4	-	7932	9	FSM	ENSG00000109189.13	ENST00000441222.8	7932	9	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_2	27.3698625316241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCAGTATATTGTTCT	-26	True	NA	3	True	AATAAA	-27	NA	52659301	52590959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_71948.nic	chr4	-	1423	5	ISM	ENSG00000109189.13	ENST00000441222.8	7932	9	-1	18948	-1	-12327	5prime_fragment	FALSE	canonical	3	164	junction_3	19.0656759649376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATAGAATT	-27	True	NA	NA	False	NA	NA	NA	52659302	52609907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_7195.nic	chr1	-	2269	2	ISM	ENSG00000160710.18	ENST00000368471.8	6519	15	-8	18413	0	-276	5prime_fragment	FALSE	canonical	3	566	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAATGATTGGTCTTG	-2	True	NA	NA	False	NA	NA	NA	154627976	154600479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_154602627_154627854
transcript_71950.known	chr4	-	4622	8	FSM	ENSG00000109189.13	ENST00000451218.6	4622	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	72.4898303916079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCTCTTTCTAGAGAA	-15	True	NA	-52	True	AATAAA	-16	NA	52659290	52594177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52659114
transcript_71952.known	chr4	+	870	6	FSM	ENSG00000226950.8	ENST00000444958.2	870	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1096.52403530429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	-5	True	NA	NA	False	NA	NA	NA	52712500	52721683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867_52720372_52721569
transcript_71954.known	chr4	-	2744	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	24.1660919471891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGCCCCCAAACACT	239	False	NA	-13	True	AATAAA	-24	NA	52751399	52743516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
transcript_71957.known	chr4	+	987	3	FSM	ENSG00000226950.8	ENST00000411630.7	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_1	586	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	NA	False	NA	34	True	AATAAA	-19	NA	52712324	52714141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52712528_52712823_52712960_52713493
transcript_71958.known	chr4	-	3614	3	FSM	ENSG00000226887.8	ENST00000443173.6	3614	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGAAAGTGATTCACAT	3	True	NA	-28	True	AATAAA	-18	NA	52751425	52742552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52745944_52750929_52751070_52751342
transcript_71959.known	chr4	+	6065	2	FSM	ENSG00000226950.8	ENST00000441504.2	6065	2	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGACTGGACCATGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	52712404	52718765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52712528_52712823
transcript_7196.known	chr1	-	2477	2	FSM	ENSG00000160710.18	ENST00000680472.1	2477	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGACAGAGTGAGACTC	NA	False	NA	NA	False	NA	NA	NA	154628007	154600203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154602627_154627953
transcript_71962.known	chr4	+	2115	5	FSM	ENSG00000226950.8	ENST00000675590.1	2115	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1127.94547740571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	52712453	52721683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867
transcript_71963.nic	chr4	+	1705	3	ISM	ENSG00000128045.7	ENST00000248706.5	1968	4	881	0	866	0	3prime_fragment	FALSE	canonical	3	266	junction_1	4.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTCTAACTTCGTCT	764	False	NA	25	True	AATAAA	-17	NA	52863197	52866835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_52863325_52864477_52864555_52865334
transcript_71965.known	chr4	-	3162	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	14.1680759102992	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATTGTGGATTACA	-23	True	NA	NA	False	AATAAA	-17	NA	53366061	52872981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
transcript_71966.known	chr4	-	3978	11	FSM	ENSG00000072201.14	ENST00000263925.8	3978	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	13.5679770046975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	53591486	53459300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564_53478743_53481719_53481855_53496022_53496395_53498640_53498844_53507316_53507470_53507985_53508228_53573622_53574089_53591387
transcript_71971.nic	chr4	-	1275	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81122	969	31288	-969	3prime_fragment	FALSE	canonical	3	41	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCTAAAGCTCTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	53477095	53460269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_71972.nic	chr4	-	1089	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81122	1155	31288	-1155	3prime_fragment	FALSE	canonical	3	41	junction_2	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTTTTAGTATGTG	NA	False	NA	-1	True	AATAAA	-17	NA	53477095	53460455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_71973.nic	chr4	-	915	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81122	1329	31288	-1329	3prime_fragment	FALSE	canonical	3	41	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTATACCCCACTGA	NA	False	NA	NA	False	AATAAA	-21	NA	53477095	53460629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_71977.known	chr4	+	2180	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_13	117.65626434573	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	-15	True	NA	76	True	AATAAA	-19	NA	53377644	53459668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_7198.known	chr1	-	1002	5	FSM	ENSG00000163344.6	ENST00000368467.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_2	19.5624001594896	721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGAGCTGCTTGTCTC	4	True	NA	-9	True	AATAAA	-15	NA	154936719	154924739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154925266_154926353_154926484_154929023_154929177_154932351_154932416_154936590
transcript_71980.known	chr4	+	3396	18	FSM	ENSG00000145216.16	ENST00000337488.11	3396	18	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	107.073916195364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	-19	True	NA	24	True	TATAAA	-36	NA	53377640	53460862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71987.nic	chr4	+	2129	18	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_13	118.658621735257	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	11	False	NA	29	True	AATAAA	-30	NA	53377624	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71993.nic	chr4	+	2097	17	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	115.587882555872	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-2	True	NA	29	True	AATAAA	-30	NA	53377611	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_71996.nic	chr4	+	2063	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_10	112.266911309611	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	11	False	NA	29	True	AATAAA	-30	NA	53377624	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_72.known	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3769	junction_2	292.5	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_+_10792_10882_11058_11434
transcript_720.known	chr1	+	816	5	FSM	ENSG00000120948.19	ENST00000621715.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	622.343303571269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATCAAGGTAGTAATATG	11	True	NA	110	True	NA	NA	NA	11012669	11022310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11022123
transcript_72003.nic	chr4	+	2031	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	3	176	junction_9	107.240829703782	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-2	True	NA	29	True	AATAAA	-30	NA	53377611	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_72006.nic	chr4	+	2070	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	96.1626862261149	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-2	True	NA	29	True	AATAAA	-30	NA	53377611	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_72010.nic	chr4	+	1989	16	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_11	121.240917185577	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-2	True	NA	29	True	AATAAA	-30	NA	53377611	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_72013.nic	chr4	+	1994	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_9	108.683148034397	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	11	False	NA	29	True	AATAAA	-30	NA	53377624	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_72017.known	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	101.481072931189	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-6	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_72024.known	chr4	+	1146	5	FSM	ENSG00000134853.12	ENST00000507536.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	6.72681202353685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCATGTAGCTTGTA	NA	False	NA	8	True	AATAAA	-17	NA	54277175	54281977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54281580
transcript_72026.nic	chr4	+	610	2	ISM	ENSG00000134853.12	ENST00000461294.2	480	3	483	0	58	0	3prime_fragment	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTTTTGGTATC	NA	False	NA	NA	False	ATTAAA	-21	NA	54277233	54278246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_54277493_54277895
transcript_72027.known	chr4	+	3470	21	FSM	ENSG00000157404.17	ENST00000687295.1	5271	21	29	1772	-5	1419	multi-exon	FALSE	canonical	3	274	junction_14	42.2012736774614	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGGACAGAGTATGAAC	116	False	NA	NA	False	AAAACA	-14	NA	54657917	54739011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726039_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
transcript_72028.known	chr4	+	5147	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	79.6018215871974	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	-3	True	NA	15	True	AATAAA	-20	NA	54657956	54740715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
transcript_72029.known	chr4	+	538	2	FSM	ENSG00000157404.17	ENST00000514582.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTCTTCACTGTT	0	True	NA	NA	False	GATAAA	-31	NA	54657938	54695906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_54658082_54695511
transcript_72031.nic	chr4	-	1853	11	ISM	ENSG00000128052.10	ENST00000512566.1	2037	13	-329	2106	-27	-2106	5prime_fragment	FALSE	canonical	3	107	junction_8	16.9944108459223	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAACAAAGTGAGTTT	NA	False	NA	NA	False	AATAAA	-37	NA	55125622	55106698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_72032.nic	chr4	-	939	5	ISM	ENSG00000128052.10	ENST00000512566.1	2037	13	-329	10329	-27	-10329	5prime_fragment	FALSE	canonical	3	107	junction_2	12.1037184369102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGATGAAAGTTACCAG	NA	False	NA	NA	False	NA	NA	NA	55125622	55114921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_72033.known	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_27	31.9526626684731	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-1	True	NA	-13	True	ATTAAA	-20	NA	55125595	55078480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_72035.known	chr4	+	4061	5	FSM	ENSG00000128039.13	ENST00000264228.9	4061	5	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_3	15.1389398572027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGTCGAATTTCTTT	-9	True	NA	NA	False	ATTAAA	-21	NA	55346241	55373100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_72038.known	chr4	+	768	3	FSM	ENSG00000128039.13	ENST00000505210.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	106.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTCCACTTTCTGA	56	False	NA	21	True	AATAAA	-21	NA	55346411	55370310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55346558_55359345_55359489_55369831
transcript_7204.known	chr1	-	3207	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	15.2065775242163	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	20	True	NA	-24	True	AATAAA	-17	NA	154956099	154944079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
transcript_72043.known	chr4	-	816	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_9	21.7942114865619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-2	True	NA	-17	True	ATTAAA	-14	NA	55636298	55595230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_72044.nic	chr4	-	943	10	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-190	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_9	46.2769441034686	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	55636888	55595230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
transcript_72045.nnic	chr4	-	705	10	NNC	ENSG00000109255.11	novel	816	10	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_9	61.7053932452874	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	55636808	55595230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636701
transcript_72046.known	chr4	-	756	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_7	60.5411791675716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAGTGTTTTAATGA	509	False	NA	-15	True	ATTAAA	-16	NA	55636284	55595228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
transcript_72054.known	chr4	+	3592	19	FSM	ENSG00000090989.18	ENST00000381295.7	3592	19	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	16.5310220905431	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAAAAATTAATTGCAA	-71	True	NA	79	True	ATTAAA	-21	NA	55853647	55905086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_72055.known	chr4	+	3357	19	FSM	ENSG00000090989.18	ENST00000346134.11	3357	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	23.3685580679005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	-44	True	NA	27	True	AATAAA	-44	NA	55853674	55905034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_72056.known	chr4	+	3248	18	FSM	ENSG00000090989.18	ENST00000349598.6	3248	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	31.2871509273182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	20	True	NA	27	True	AATAAA	-44	NA	55853738	55905034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_72059.nic	chr4	+	2421	17	ISM	ENSG00000090989.18	ENST00000346134.11	3357	19	-29	5228	-2	-4771	5prime_fragment	FALSE	canonical	3	42	junction_1	23.006792475267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGCCAAACAAAAATACAC	-73	True	NA	NA	False	NA	NA	NA	55853645	55899806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684
transcript_72060.nic	chr4	+	2533	16	NIC	ENSG00000090989.18	novel	3592	19	NA	NA	-3	-4771	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	26.7354113905551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGCCAAACAAAAATACAC	-74	True	NA	NA	False	NA	NA	NA	55853644	55899806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684
transcript_72061.nnic	chr4	+	1618	9	NNC	ENSG00000090989.18	novel	3592	19	NA	NA	-3	6468	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_8	37.7979827504061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGCATTCAATTTCTTT	-74	True	NA	NA	False	AATAAA	-21	NA	55853644	55875221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55874996
transcript_72062.nic	chr4	+	2003	13	ISM	ENSG00000174799.11	ENST00000257287.5	5596	26	-137	52055	-63	14726	5prime_fragment	TRUE	canonical	3	29	junction_10	9.48976056365784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGAACTTGCGTTAT	-20	True	NA	NA	False	NA	NA	NA	55948807	55981306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681_55959767_55964273_55964403_55965643_55965860_55969062_55969129_55971269_55971409_55974745_55974970_55980142_55980296_55981226
transcript_72065.known	chr4	+	2092	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	5.27636238330917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	43	False	NA	NA	False	NA	NA	NA	55948870	55960925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
transcript_72066.known	chr4	+	5596	26	FSM	ENSG00000174799.11	ENST00000257287.5	5596	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	10.8406641862941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTCTTTCTTACA	-4	True	NA	13	True	AATAAA	-13	NA	55948944	56033361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681_55959767_55964273_55964403_55965643_55965860_55969062_55969129_55971269_55971409_55974745_55974970_55980142_55980296_55981226_55981380_55985280_55985359_55991933_55992086_55999301_55999418_55999490_55999646_56008326_56008383_56009734_56009904_56011411_56011523_56011799_56011986_56017647_56017858_56019352_56019556_56020675_56020781_56024500_56024615_56031359
transcript_72068.known	chr4	-	3581	15	FSM	ENSG00000157426.14	ENST00000205214.11	3581	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.54400374531753	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	-29	True	NA	NA	False	ATTAAA	-25	NA	56387491	56338289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_7207.nnic	chr1	-	2897	13	NNC	ENSG00000160691.19	novel	3059	13	NA	NA	-343	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	324.652752525252	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	16	True	NA	-14	True	ATTAAA	-17	NA	154971090	154962297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_72070.known	chr4	-	3241	14	FSM	ENSG00000157426.14	ENST00000513376.5	3241	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	16.1340538088756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	39	True	NA	NA	False	ATTAAA	-25	NA	56387423	56338289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56387361
transcript_72071.known	chr4	-	3480	14	FSM	ENSG00000157426.14	ENST00000602986.5	3480	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	16.0029583063949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTACACTTGATT	NA	False	NA	NA	False	ATTAAA	-28	NA	56387508	56338286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56384069_56384342_56387361
transcript_72072.nic	chr4	-	3423	14	NIC	ENSG00000157426.14	novel	3581	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	14.3052107029026	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	-35	True	NA	NA	False	ATTAAA	-25	NA	56387497	56338289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_56338792_56342834_56342967_56343561_56343685_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_72078.known	chr4	-	3182	12	FSM	ENSG00000157426.14	ENST00000451613.5	3182	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	16.1716004513166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTACACTTGATT	NA	False	NA	NA	False	ATTAAA	-28	NA	56387508	56338286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56338792_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_72079.known	chr4	-	3004	11	FSM	ENSG00000157426.14	ENST00000502617.1	3004	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	6.24579858785088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTCATAGTTTCT	-38	True	NA	5	True	NA	NA	NA	56387500	56348927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_7208.nnic	chr1	-	2900	13	NNC	ENSG00000160691.19	novel	3062	13	NA	NA	-343	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	293.329580941908	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	16	True	NA	-14	True	ATTAAA	-17	NA	154971090	154962297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_72083.nic	chr4	-	677	4	ISM	ENSG00000157426.14	ENST00000502617.1	3004	11	3	29389	3	3442	5prime_fragment	FALSE	canonical	3	48	junction_1	6.97614984548545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCATAAGTTCTGAG	-35	True	NA	NA	False	AAAAAG	-7	NA	56387497	56378316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_56378465_56382476_56382598_56384069_56384342_56387361
transcript_72088.known	chr4	-	3682	11	FSM	ENSG00000128059.8	ENST00000264220.6	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_6	34.5179663363878	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-12	True	NA	-11	True	GATAAA	-24	NA	56435615	56393361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_72096.known	chr4	-	563	5	FSM	ENSG00000128059.8	ENST00000507724.1	563	5	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_3	231.154034141738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTATTCCAGTGTCTGA	-2	True	NA	NA	False	NA	NA	NA	56435496	56403073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56403186_56403288_56403402_56406494_56406619_56407649_56407717_56435349
transcript_721.known	chr1	+	1388	5	FSM	ENSG00000120948.19	ENST00000439080.6	1388	5	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_2	550.980659823918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAATATTGAGTGGTTG	-6	True	NA	124	True	AAAAAG	-41	NA	11012652	11022858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11012744_11013715_11013966_11018732_11018874_11020428_11020600_11022123
transcript_7210.known	chr1	-	3059	13	FSM	ENSG00000160691.19	ENST00000368450.5	3059	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	293.221036743425	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	6	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_72102.known	chr4	+	1514	10	FSM	ENSG00000128050.9	ENST00000505164.5	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	900.532188332112	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGCTGACAAGAAAAT	-3	True	NA	-88	True	NA	NA	NA	56435751	56459499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56435976_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_72103.known	chr4	+	3339	10	FSM	ENSG00000128050.9	ENST00000264221.6	3339	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	899.013011619814	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGTCTCTGAAGTCAC	-6	True	NA	32	True	ATTAAA	-25	NA	56435748	56461368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56435929_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_72110.known	chr4	+	3297	10	FSM	ENSG00000128050.9	ENST00000399688.7	3297	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1222.25839340416	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCATGGTCTCTG	-6	True	NA	25	True	ATTAAA	-18	NA	56436137	56461361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56436329_56441662_56441861_56446356_56446378_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_72111.known	chr4	+	3855	19	FSM	ENSG00000174780.17	ENST00000642900.1	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_14	71.001999624076	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTTTTGGGTGTTG	1	True	NA	14	True	AATAAA	-23	NA	56467616	56503681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_7212.known	chr1	-	3062	13	FSM	ENSG00000160691.19	ENST00000368453.8	3062	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	256.930100200208	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	6	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_72122.nic	chr4	+	1745	17	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-50	8289	-50	0	5prime_fragment	FALSE	canonical	3	476	junction_14	72.0368558013882	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGTAAGGCATTAAAAAAGT	7103	False	NA	NA	False	AAAAAG	-18	NA	56467566	56495392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356
transcript_72123.known	chr4	+	2406	17	FSM	ENSG00000174780.17	ENST00000510663.6	2406	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	160.572206791057	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAAATTTTCTGTCATGT	1	True	NA	NA	False	AATAAA	-23	NA	56467616	56502415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_72132.nic	chr4	+	917	9	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-50	20520	-50	5989	5prime_fragment	FALSE	canonical	3	502	junction_8	83.0202347322627	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGTGAAATTAACCA	7103	False	NA	NA	False	GATAAA	-38	NA	56467566	56483161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138
transcript_72135.known	chr4	+	745	5	FSM	ENSG00000174780.17	ENST00000504757.2	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_4	65.8217289350561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCTCCAAGTTCCTGT	2	True	NA	NA	False	ATTAAA	-22	NA	56467617	56474508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279
transcript_72136.known	chr4	-	722	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	12	True	NA	1	True	AATAAA	-17	NA	56821701	56809860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
transcript_72137.known	chr4	-	659	4	FSM	ENSG00000128040.12	ENST00000504762.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATTCAGTTCCTACT	19	True	NA	-10	True	AATAAA	-6	NA	56821694	56809871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821502
transcript_72138.known	chr4	-	613	4	FSM	ENSG00000128040.12	ENST00000248701.8	613	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-29	True	NA	1	True	AATAAA	-17	NA	56821742	56809860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821607
transcript_72139.known	chr4	-	2218	7	FSM	ENSG00000084092.7	ENST00000264230.5	2218	7	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	22.5419362275934	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTTTCTTTTTTCTT	-11	True	NA	-9	True	AATAAA	-14	NA	56977606	56963349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_56963662_56964405_56964527_56966619_56966737_56968383_56968516_56973147_56973354_56973857_56974023_56976441
transcript_72140.known	chr4	+	7309	4	FSM	ENSG00000084093.19	ENST00000309042.12	7309	4	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_1	43.4920171474669	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTTTGTTTATTATT	-13	True	NA	9	True	AATAAA	-14	NA	56907899	56935844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56908214_56910629_56911537_56919786_56919871_56929840
transcript_72145.known	chr4	+	7371	4	FSM	ENSG00000084093.19	ENST00000675105.1	7371	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	158.896891795347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	181	False	NA	-13	True	NA	NA	NA	56909189	56935822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56909588_56910629_56911537_56919786_56919871_56929840
transcript_72147.nnic	chr4	+	1710	4	NNC	ENSG00000084093.19	novel	7371	4	NA	NA	-40	-1692	intron_retention	FALSE	canonical	2	7	junction_1	158.896891795347	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTAGAAAGCAAATCCA	141	False	NA	-54	True	AAAAAG	-6	NA	56909149	56930492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_56909217_56910629_56911537_56919786_56919871_56929840
transcript_72149.known	chr4	+	4108	26	FSM	ENSG00000047315.17	ENST00000381227.5	4108	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	115.020373847419	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	1	True	NA	32	True	AATAAA	-16	NA	56977741	57031158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56977809_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_72151.known	chr4	+	551	2	FSM	ENSG00000047315.17	ENST00000497845.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAACTGCAGACATA	8	True	NA	NA	False	NA	NA	NA	56978903	56986803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_56979005_56986353
transcript_72155.known	chr4	+	870	1	FSM	ENSG00000243199.1	ENST00000466377.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	18	False	NA	NA	False	NA	NA	NA	65573458	65574328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_65573500_65574300
transcript_72156.known	chr4	+	422	2	FSM	ENSG00000250846.6	ENST00000514260.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTTAGTCATCTCTG	939	False	NA	NA	False	AATAAA	-18	NA	65670529	65693386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_65670674_65693108
transcript_72158.known	chr4	-	6823	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	13.3041346956501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGTGTAAATTTAAG	-10	True	NA	-11	True	AATAAA	-23	NA	67545503	67468761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_72162.nic	chr4	-	1653	9	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-35	19139	-35	-494	5prime_fragment	FALSE	canonical	3	70	junction_5	10.1365674663566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAGGAAGAATCTAAAAA	0	True	NA	NA	False	AAGAAA	-16	NA	67545538	67512543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_72163.nic	chr4	-	1507	8	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-99	20853	-99	-2208	5prime_fragment	FALSE	canonical	3	70	junction_4	10.8062717994728	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAAGAAAATTCATGGC	NA	False	NA	NA	False	TATAAA	-8	NA	67545602	67514257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_72165.known	chr4	-	9540	33	FSM	ENSG00000033178.13	ENST00000322244.10	9540	33	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_25	23.2452742173006	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGCACATTTTTTTAA	-9	True	NA	-8	True	AATAAA	-21	NA	67701155	67612651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_67619133_67622830_67622926_67623134_67623223_67624125_67624254_67624993_67625188_67626359_67626478_67629070_67629143_67630465_67630536_67631707_67631772_67631856_67631909_67633344_67633474_67634241_67634323_67634428_67634519_67635452_67635559_67638942_67639125_67641150_67641229_67644697_67644779_67645937_67646017_67646723_67646792_67649067_67649212_67662188_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_72167.known	chr4	-	2387	11	FSM	ENSG00000033178.13	ENST00000429659.7	2387	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	29.8008389143661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	-2	True	NA	NA	False	NA	NA	NA	67701148	67662486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_72168.known	chr4	+	1609	4	FSM	ENSG00000248049.8	ENST00000664183.1	1609	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	11.8602979164381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGACTCTGTCTAAA	-32	True	NA	NA	False	NA	NA	NA	67701336	67732722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67728539_67728687_67730073_67730171_67731505
transcript_72169.nic	chr4	+	502	3	FSM	ENSG00000248049.8	ENST00000693410.1	477	3	-29	4	-6	-4	multi-exon	FALSE	canonical	3	23	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCCTATGGTATTTTAA	-17	True	NA	7	True	ATTAAA	-17	NA	67701254	67730198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67728539_67728687_67730073
transcript_72170.nnic	chr4	+	1447	3	NNC	ENSG00000248049.8	novel	1445	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	18.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATTTGCGCTGGTGTT	-5	True	NA	9	True	AATAAA	-1	NA	67701266	67722505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_67701485_67720421_67720622_67721476
transcript_72171.known	chr4	+	2595	3	FSM	ENSG00000248049.8	ENST00000654961.1	2595	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	12.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTCCAAATATTTTA	-11	True	NA	-9	True	NA	NA	NA	67701260	67723217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67720421_67721052_67721476
transcript_72173.known	chr4	+	2233	2	FSM	ENSG00000248049.8	ENST00000506606.1	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCTATTTGCGCTGGT	-36	True	NA	6	True	ATTAAA	-14	NA	67701332	67722502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67720421
transcript_72175.known	chr4	+	1445	3	FSM	ENSG00000248049.8	ENST00000498917.2	1445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATTTGCGCTGGTGTT	8	True	NA	9	True	AATAAA	-1	NA	67701279	67722505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_67701485_67720421_67720633_67721476
transcript_72177.known	chr4	-	6233	17	FSM	ENSG00000083896.13	ENST00000344157.9	6233	17	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_16	45.3650126749679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTCTTAAACACAGACT	15	False	68350105	NA	False	AATAAA	-26	NA	68350090	68310386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_72178.nic	chr4	-	349	2	ISM	ENSG00000083896.13	ENST00000355665.7	3244	16	106	24973	62	-454	5prime_fragment	FALSE	canonical	3	178	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAAGGGTATGTAAG	56	True	NA	-12	True	GATAAA	-3	NA	68349983	68338293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_68338385_68349725
transcript_7218.known	chr1	-	3472	12	FSM	ENSG00000160691.19	ENST00000368445.9	3472	12	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_3	209.930881974548	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	4	True	NA	-14	True	ATTAAA	-17	NA	154970741	154962297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_72182.known	chr4	+	2020	1	FSM	ENSG00000132467.4	ENST00000254803.4	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATATGTTCTGTGTGGT	-5	True	NA	10	True	AATAAA	-22	NA	70688531	70690551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70688500_70690600
transcript_72185.known	chr4	-	1794	10	FSM	ENSG00000132463.15	ENST00000502323.5	1794	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	234.194969951571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAGCTTAGTGTAAAT	4249	False	NA	NA	False	TTTAAA	-16	NA	70839001	70820311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70838868
transcript_72186.known	chr4	-	1765	10	FSM	ENSG00000132463.15	ENST00000514161.5	1765	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	228.456657693411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAATTTTGCTGTATT	3907	False	NA	NA	False	NA	NA	NA	70839343	70820374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839176
transcript_72187.known	chr4	-	2491	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	232.07948829849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	3747	False	NA	-9	True	AATAAA	-32	NA	70839503	70819757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
transcript_72194.known	chr4	-	6610	10	FSM	ENSG00000132463.15	ENST00000254799.11	6610	10	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_5	69.9181178942665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGTGAACCTACATT	-6	True	NA	-10	True	AATAAA	-21	NA	70839890	70815782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
transcript_72198.known	chr4	+	2056	4	FSM	ENSG00000173542.9	ENST00000509041.5	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.56846672960488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAATTACATATATATAT	-6	True	NA	NA	False	AATAAA	-17	NA	70902346	70976743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152
transcript_72199.known	chr4	+	6930	6	FSM	ENSG00000173542.9	ENST00000309395.7	6930	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	10.6282642044691	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTTGCATTACTGT	16	True	NA	6	True	AATAAA	-21	NA	70902368	70988168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152_70975287_70979127_70979292_70981979
transcript_7220.known	chr1	-	3481	12	FSM	ENSG00000160691.19	ENST00000448116.7	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_3	137.164798028437	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-2	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_72200.known	chr4	+	2506	7	FSM	ENSG00000156136.10	ENST00000286648.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	10.6926766215636	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	50	True	NA	27	True	AATAAA	-31	NA	70993648	71030914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70993927_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_72202.known	chr4	+	2683	7	FSM	ENSG00000156136.10	ENST00000503359.5	2683	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	91.7637364830647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	-36	True	NA	27	True	AATAAA	-31	NA	70993562	71030914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_70994018_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_72203.nnic	chr4	+	807	2	Antisense	novelGene_ENSG00000145321.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGGGGGGAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	71638544	71753497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_71639031_71753176
transcript_72205.known	chr4	+	1964	4	FSM	ENSG00000056291.19	ENST00000308744.12	1964	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCTGTTGTTTTTCT	-3	True	NA	NA	False	TATAAA	-42	NA	72031999	72148305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_72032201_72128584_72128920_72138039_72138140_72146977
transcript_72206.nnic	chr4	-	2407	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1169043222683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATTTCTTTGATTGA	NA	False	NA	-6	True	AATAAA	-23	NA	73069819	73056079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_73057167_73057965_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_72207.nnic	chr4	-	2320	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.1169043222683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATTTCTTTGATTGA	-2	True	NA	-6	True	AATAAA	-23	NA	73069732	73056079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_73057173_73057971_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_72210.known	chr4	-	1083	6	FSM	ENSG00000163626.17	ENST00000510031.1	1083	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	15.3022874107109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTTCCAATAATTTTG	4	True	NA	NA	False	AAGAAA	-5	NA	73069726	73058113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068134_73069316
transcript_72213.known	chr4	-	10797	34	FSM	ENSG00000132466.20	ENST00000358602.9	10797	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	56.6711714300846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTCACAACACTTATT	-2	True	NA	NA	False	ATTAAA	-17	NA	73258798	73073375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_72215.known	chr4	-	7734	33	FSM	ENSG00000132466.20	ENST00000330838.10	7734	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	60.712951666016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTACTGGTGTAATTT	-2	True	NA	NA	False	ATTAAA	-17	NA	73258798	73075685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_72217.known	chr4	+	728	5	FSM	ENSG00000081051.8	ENST00000508838.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.2346843032422	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTTATCACAGAAATAA	2895	False	NA	-28	True	GATAAA	-16	NA	73450548	73455741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_72218.known	chr4	+	476	4	FSM	ENSG00000081051.8	ENST00000506820.1	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30.0998338865848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	2744	False	NA	8	True	AATAAA	-16	NA	73453489	73455777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73453631_73453764_73453898_73455235_73455291_73455630
transcript_72219.known	chr4	-	5882	11	FSM	ENSG00000169435.14	ENST00000307439.10	5882	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	4.34050688284214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTCCCTGATATAG	-16	True	NA	NA	False	ATTAAA	-16	NA	73620436	73571549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73582188_73582291_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_72220.known	chr4	-	2735	10	FSM	ENSG00000169435.14	ENST00000395777.6	2735	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	6.09188896083235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTACCCTAAGGCTG	8	True	NA	NA	False	AATAAA	-9	NA	73620412	73574570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_72221.known	chr4	+	1537	4	FSM	ENSG00000124875.10	ENST00000226317.10	1537	4	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_2	4.18993502999218	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTGTTTCTCCTTCT	1	True	NA	14	True	AATAAA	-15	NA	73836677	73838760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73836860_73836963_73837097_73837202_73837287_73837622
transcript_72223.known	chr4	+	1174	4	FSM	ENSG00000163739.5	ENST00000395761.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAATTTTTTAATTGT	0	True	NA	NA	False	NA	NA	NA	73869392	73871308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_73869571_73869668_73869793_73869905_73869990_73870520
transcript_72225.known	chr4	-	773	3	FSM	ENSG00000163737.5	ENST00000296029.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGTAAATAAATAAGACT	-3	True	NA	NA	False	AATAAA	-30	NA	73982027	73980810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73981292_73981416_73981544_73981862
transcript_72226.known	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	13.1993265821489	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	1	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
transcript_72229.known	chr4	-	1075	4	FSM	ENSG00000163734.4	ENST00000296026.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.24933858267454	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGTGGTTTTTCAAA	-1	True	NA	NA	False	AATAAA	-18	NA	74038689	74036588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_74037278_74038092_74038177_74038289_74038414_74038511
transcript_72230.known	chr4	-	630	3	FSM	ENSG00000163734.4	ENST00000502974.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTATTTCTTACGAGG	-1	True	NA	NA	False	AAAAAG	-44	NA	74038689	74037131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_74037278_74038092_74038177_74038289
transcript_72231.known	chr4	-	577	3	FSM	ENSG00000081041.9	ENST00000296031.4	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGCAGAGGCCACCT	-1	True	NA	NA	False	NA	NA	NA	74099195	74097675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_74097772_74098600_74098685_74098798
transcript_72232.known	chr4	+	2389	9	FSM	ENSG00000163738.19	ENST00000359107.10	2389	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	47.7688117394603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	-19	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_72234.nnic	chr4	+	1749	8	NNC	ENSG00000163738.19	novel	2389	9	NA	NA	-3	84	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_7	50.9193039053371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTATCATGGTACATT	-32	True	NA	NA	False	ATTAAA	-22	NA	74158104	74242294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74241418
transcript_72235.known	chr4	+	2355	8	FSM	ENSG00000163738.19	ENST00000325278.7	2355	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	10.1337987719818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	-19	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_72238.known	chr4	+	468	3	FSM	ENSG00000163738.19	ENST00000484725.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	78	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCAGGGCGGGATAT	38	False	NA	NA	False	NA	NA	NA	74158174	74162106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74160054_74160089_74161779
transcript_72239.known	chr4	+	2363	2	FSM	ENSG00000163738.19	ENST00000461101.1	2363	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCATCTTGCTGCTTT	-19	True	NA	27	True	ATTAAA	-19	NA	74158117	74162253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74160054
transcript_72243.known	chr4	+	2007	7	FSM	ENSG00000163738.19	ENST00000423607.6	2007	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.6424531874924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTATGGAAGAAATGGT	-29	True	NA	NA	False	ATTAAA	-25	NA	74158107	74183931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74180686_74180867_74181685_74181792_74182726
transcript_72249.nnic	chr4	-	754	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42477	-18	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	9.8770215933527	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	NA	False	NA	-16	True	AATAAA	-17	NA	75127194	75081942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127065
transcript_72250.nnic	chr4	-	762	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42551	-18	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	10.4029910228848	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	NA	False	NA	-16	True	AATAAA	-17	NA	75127268	75081942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127131
transcript_72251.nnic	chr4	-	789	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42607	-18	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_2	7.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	NA	False	NA	-16	True	AATAAA	-17	NA	75127324	75081942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75127065
transcript_72252.nnic	chr4	-	622	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42506	-18	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	10.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTTCTCACAAATT	NA	False	NA	-16	True	AATAAA	-17	NA	75127223	75081942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_75082358_75084588_75084704_75127131
transcript_72257.known	chr4	-	1123	9	FSM	ENSG00000163743.14	ENST00000504085.5	1123	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	274.731687287797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACTGTGCTTGTGTT	6	True	NA	NA	False	NA	NA	NA	75514403	75482341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491582_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514196
transcript_72259.known	chr4	-	728	9	FSM	ENSG00000163743.14	ENST00000513909.5	728	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	275.134398976209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTGTGAATCCTATAA	153	False	NA	NA	False	NA	NA	NA	75514256	75482603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514154
transcript_72260.known	chr4	-	4408	9	FSM	ENSG00000163743.14	ENST00000324439.10	4408	9	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_6	19.6941457037364	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTACCCTTTGATCA	6	True	NA	1	True	AGTAAA	-24	NA	75514403	75479032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_72261.known	chr4	-	1011	9	FSM	ENSG00000163743.14	ENST00000512706.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	209.175763414407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCATATTACAAGTA	-21	True	NA	NA	False	NA	NA	NA	75514430	75482412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514240
transcript_72263.known	chr4	-	1304	9	FSM	ENSG00000163743.14	ENST00000505105.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	213.063920866486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAGAAAGTTTTTT	-8	True	NA	-13	True	AATAAA	-14	NA	75514312	75482007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490664_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_72271.known	chr4	-	1735	8	FSM	ENSG00000163743.14	ENST00000380840.6	1735	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	225.25468578786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATACCTCTTACTTCAG	18	True	NA	NA	False	NA	NA	NA	75514286	75481468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75514196
transcript_72274.known	chr4	+	1134	6	FSM	ENSG00000174796.12	ENST00000507556.5	1134	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	23.6643191323985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAGCATAAACAGGGCA	0	True	NA	NA	False	NA	NA	NA	75514472	75542959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75539858_75539960_75542408
transcript_72276.known	chr4	+	3549	5	FSM	ENSG00000174796.12	ENST00000311638.7	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	17.5695048308141	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	0	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_72278.known	chr4	+	655	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	13.4742552876052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATATGTAGTTCACT	16	True	NA	NA	False	AATAGA	-16	NA	75514488	75522050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
transcript_72280.nic	chr4	-	1494	8	ISM	ENSG00000138769.11	ENST00000429927.6	3383	12	188	20114	0	0	5prime_fragment	FALSE	canonical	3	9	junction_1	2.24971653543195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCCTTAGTTGAAGA	-18	True	NA	NA	False	AAAAAG	-6	NA	75630528	75598118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75598213_75600280_75600370_75603816_75603957_75605521_75605635_75607182_75607362_75614254_75614450_75625820_75626018_75630041
transcript_72281.known	chr4	-	4935	14	FSM	ENSG00000138769.11	ENST00000307465.9	4935	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	4.70427226197559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTCTCAAGGGTCT	-18	True	NA	-1	True	AATAAA	-15	NA	75630528	75576495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75579179_75581809_75581899_75591818_75591926_75592145_75592270_75596246_75596341_75596934_75597237_75598076_75598213_75600280_75600370_75603816_75603957_75605521_75605635_75607182_75607362_75614254_75614450_75625820_75626018_75630041
transcript_72282.known	chr4	+	4135	26	FSM	ENSG00000138768.15	ENST00000264904.8	4135	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	413.006762172243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	18	False	NA	18	True	AATAAA	-19	NA	75724597	75814286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75760593_75760606_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75795335_75795357_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_72285.known	chr4	+	4123	24	FSM	ENSG00000138768.15	ENST00000514213.7	4123	24	0	0	0	0	multi-exon	TRUE	canonical	3	741	junction_14	186.188452613417	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	-3	True	NA	18	True	AATAAA	-19	NA	75724576	75814286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_72296.known	chr4	-	4321	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	920.606914436933	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	-21	True	NA	-20	True	AATAAA	-19	NA	75673411	75642785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_72298.known	chr4	-	5189	12	FSM	ENSG00000138757.15	ENST00000677583.1	5189	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	963.60151738025	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	49	True	NA	NA	False	NA	NA	NA	75724377	75641848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_72299.known	chr4	-	5390	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_11	913.854003928345	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724589	75641848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_723.nic	chr1	+	614	2	ISM	ENSG00000120948.19	ENST00000613864.4	584	4	-275	4489	35	-4489	5prime_fragment	FALSE	canonical	3	1442	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTACCATTTGGTTT	NA	False	NA	16	True	NA	NA	NA	11012378	11013964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_11012744_11013715
transcript_72301.known	chr4	-	5327	12	FSM	ENSG00000138757.15	ENST00000678062.1	5327	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	1038.46358220703	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724548	75641848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_72311.known	chr4	-	5142	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	739.794998631378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	185	False	NA	NA	False	NA	NA	NA	75673205	75641848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_72312.known	chr4	-	2609	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_4	263.269063887119	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTAGCATATTATTTAT	-11	True	NA	-36	True	AGTAAA	-2	NA	75673401	75644388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_72313.known	chr4	-	5155	11	FSM	ENSG00000138757.15	ENST00000678122.1	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_10	677.631787920254	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-49	True	NA	NA	False	NA	NA	NA	75724475	75641848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_72329.nic	chr4	-	875	6	ISM	ENSG00000138757.15	ENST00000357854.7	2609	11	-187	11454	26	0	5prime_fragment	FALSE	canonical	3	2255	junction_5	225.9424705539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGACAACCATCTC	NA	False	NA	10	True	NA	NA	NA	75673588	75655842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_72335.known	chr4	-	678	2	FSM	ENSG00000138757.15	ENST00000507701.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCGACCTTTATTTCAT	0	True	NA	NA	False	NA	NA	NA	75673350	75661514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75662050_75673207
transcript_72337.known	chr4	-	2441	2	FSM	ENSG00000138757.15	ENST00000677094.1	2441	2	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACATATAATCAAAATT	-1	True	NA	NA	False	CATAAA	-37	NA	75724427	75721887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75724177_75724275
transcript_72338.known	chr4	-	3003	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_13	40.2941564946959	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACCTTTGTATGTGGAGT	-4	True	NA	-11	True	AATAAA	-20	NA	75990945	75949914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_72340.known	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_20	93.5116857625273	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	3	True	NA	-2	True	AATAAA	-29	NA	75990938	75949905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_72346.nic	chr4	-	2046	21	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-17	6151	0	4056	5prime_fragment	FALSE	canonical	3	349	junction_12	41.2485151247896	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAGAGAAGAAAAAACAGA	-21	True	NA	NA	False	AAGAAA	-33	NA	75990962	75956065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_72354.nic	chr4	-	906	9	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-17	21470	0	0	5prime_fragment	FALSE	canonical	3	426	junction_8	21.8789282187222	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-21	True	NA	-28	True	AAGAAA	-21	NA	75990962	75971384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_72357.nic	chr4	-	981	9	ISM	ENSG00000198301.12	ENST00000395710.5	3080	22	-24	21479	0	0	5prime_fragment	FALSE	canonical	3	41	junction_7	142.147755434266	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-21	True	NA	-28	True	AAGAAA	-21	NA	75990962	75971384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_72375.known	chr4	-	2249	12	FSM	ENSG00000138750.15	ENST00000264883.8	2249	12	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_8	48.084120503843	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	-2	True	NA	-5	True	AATAAA	-24	NA	76148397	76114663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_72379.known	chr4	-	1563	11	FSM	ENSG00000138750.15	ENST00000514987.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	195.27521604136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCACCTCACAGCTC	-2	True	NA	NA	False	NA	NA	NA	76148397	76115205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144389_76144474_76148307
transcript_7238.known	chr1	+	779	3	FSM	ENSG00000173207.13	ENST00000308987.6	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	3587	junction_1	171.5	3473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATTGTACGGGTTTT	-5	True	NA	30	True	ATTAAA	-23	NA	154974680	154979251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154974805_154977986_154978115_154978724
transcript_72381.known	chr4	-	1385	11	FSM	ENSG00000138750.15	ENST00000512151.5	1385	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	193.577374710993	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACCGACCACATGGA	-2	True	NA	NA	False	NA	NA	NA	76148397	76115300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_7239.known	chr1	+	912	3	FSM	ENSG00000173207.13	ENST00000368439.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	1897	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTAATTGTACGGGT	-8	True	NA	27	True	ATTAAA	-20	NA	154974652	154979248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154974913_154977986_154978115_154978724
transcript_72395.known	chr4	-	1938	10	FSM	ENSG00000138750.15	ENST00000507257.5	1938	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	266.237988774455	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGCTTTATTT	13	False	NA	0	True	AATAAA	-29	NA	76148416	76114658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_724.known	chr1	+	790	2	FSM	ENSG00000120948.19	ENST00000480464.2	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	382	False	NA	11	True	AATAAA	-20	NA	11023928	11025492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11024336_11025109
transcript_72409.known	chr4	-	4694	12	FSM	ENSG00000138760.11	ENST00000264896.8	4694	12	0	0	0	0	multi-exon	TRUE	canonical	3	223	junction_8	25.1264570318859	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTAGAAGTCATATGT	0	True	NA	-21	True	AATAAA	-19	NA	76213824	76158736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76213426
transcript_7241.known	chr1	+	739	3	FSM	ENSG00000173207.13	ENST00000474215.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1965	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGCTGTAATTG	439	False	NA	20	True	ATTAAA	-13	NA	154975530	154979241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154975625_154977986_154978115_154978724
transcript_72410.known	chr4	-	4507	12	FSM	ENSG00000138760.11	ENST00000638295.1	4507	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	83.2993208826106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAACCACTTTATATA	-7	True	NA	-44	True	AATGAA	-12	NA	76234536	76158759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76234302
transcript_72412.known	chr4	+	1533	8	FSM	ENSG00000189157.14	ENST00000424749.7	1533	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.04067843196171	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCTATTGCCTTTTTC	1	True	NA	NA	False	AATAAA	-23	NA	76251720	76283783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268769_76271567_76271769_76278068_76278225_76280263_76280342_76283380
transcript_72415.known	chr4	+	1465	3	FSM	ENSG00000272414.6	ENST00000514365.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCAAGCTTGAGCCTTT	12	True	NA	NA	False	AAAACA	-16	NA	76251731	76310379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76251821_76263703_76263844_76309143
transcript_72416.known	chr4	+	2244	2	FSM	ENSG00000118804.9	ENST00000237642.7	2244	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTCTGAATTATTTG	-1	True	NA	11	True	AATAAA	-22	NA	76306732	76311130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76306990_76309143
transcript_72417.known	chr4	+	475	2	FSM	ENSG00000138771.16	ENST00000484236.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGGTTTGGGACTAG	47	True	NA	NA	False	GATAAA	-4	NA	76586312	76587265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76586470_76586947
transcript_72418.known	chr4	+	5545	10	FSM	ENSG00000138758.12	ENST00000264893.11	5545	10	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	45.9172632212373	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGCCCTTTTTTGTG	-1	True	NA	32	True	CATAAA	-33	NA	76949751	77038615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782_77030971_77034496
transcript_72422.known	chr4	+	2615	9	FSM	ENSG00000138758.12	ENST00000502584.5	2615	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	46.9813792900975	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGAGAGAGTTTTAAA	-2	True	NA	NA	False	AATAAA	-19	NA	76949750	77032158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782
transcript_72425.nic	chr4	+	1121	8	ISM	ENSG00000138758.12	ENST00000502584.5	2615	9	36	3479	21	-2157	5prime_fragment	FALSE	canonical	3	551	junction_6	36.8349878041328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGAAGAAGAAATGA	-6	True	NA	NA	False	AAAAAG	-25	NA	76949786	77028679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628
transcript_72426.known	chr4	-	2759	7	FSM	ENSG00000118816.11	ENST00000237654.9	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_5	76.7667824575766	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTTGTGACTTTT	-4	True	NA	-6	True	AATAAA	-14	NA	77075989	77047154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_77048663_77055149_77055381_77055961_77056103_77056248_77056324_77058506_77058636_77066248_77066406_77075471
transcript_72429.known	chr4	+	5471	8	FSM	ENSG00000138764.15	ENST00000316355.10	5471	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.3371342165866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGGTTATATGCTTCC	-15	True	NA	13	True	AATAAA	-20	NA	77157206	77170060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_77157507_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
transcript_72430.nic	chr4	+	2641	8	NIC	ENSG00000138764.15	novel	1410	7	NA	NA	-170	1021	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	44.2197665654404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTTGTTTGGGATCAC	-32	True	NA	11	True	AATAAA	-13	NA	77158126	77167205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_77158452_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
transcript_72433.nic	chr4	+	1278	9	NIC	ENSG00000169288.18	novel	1175	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	135.55804799052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	28	False	NA	18	True	AATAAA	-19	NA	77862860	77952785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_72434.known	chr4	+	580	4	FSM	ENSG00000169288.18	ENST00000511521.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	198.488174850684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGCTGTATTTACAGA	-4	True	NA	NA	False	NA	NA	NA	77862867	77885318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255
transcript_72435.known	chr4	+	1175	9	FSM	ENSG00000169288.18	ENST00000315567.13	1175	9	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_5	37.2573398808879	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	-3	True	NA	18	True	AATAAA	-19	NA	77862829	77952785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_77862880_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_72437.nnic	chr4	+	4396	21	NNC	ENSG00000138759.20	novel	7217	42	NA	NA	-863	17152	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	14.3687160177937	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGGGCTACCTTGTAAT	NA	False	NA	22	True	AATAAA	-32	NA	78056459	78355189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78354765
transcript_7244.known	chr1	+	1730	8	FSM	ENSG00000160688.19	ENST00000315144.14	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	124.384197434516	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	10	True	NA	22	True	AATAAA	-18	NA	154983358	154993111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_72444.known	chr4	+	1432	13	FSM	ENSG00000138772.13	ENST00000264908.11	1432	13	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_8	24.35658136019	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTGTTTGCTTT	-6	True	NA	26	True	AATAAA	-21	NA	78551769	78610447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_78551860_78554435_78554489_78573179_78573268_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_72449.known	chr4	+	1335	12	FSM	ENSG00000138772.13	ENST00000512884.5	1335	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.084314645027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATAAAAATTGTTG	-29	True	NA	-6	True	ATTAAA	-8	NA	78551746	78610415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_78551860_78554435_78554489_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_72452.known	chr4	+	832	4	FSM	ENSG00000138772.13	ENST00000505805.1	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	30.0111090542597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGCTTTCAAAGTTAAGA	1684	False	NA	15	True	ATTAAA	-28	NA	78597072	78610363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_78597415_78601509_78601569_78604276_78604400_78610055
transcript_72456.nnic	chr4	-	1499	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTTGTTTACTCATTT	NA	False	NA	NA	False	CATAAA	-28	NA	79559365	79539914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_79541160_79559111
transcript_72459.known	chr4	-	1756	13	FSM	ENSG00000138670.19	ENST00000335927.11	1756	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	13.3694822471013	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTTTTGTGTGTGTGT	5	True	NA	NA	False	NA	NA	NA	81471904	81427448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448282_81456650_81456789_81459331_81459515_81471769
transcript_72474.known	chr4	-	1667	8	FSM	ENSG00000138668.19	ENST00000352301.8	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	1908	junction_7	2114.08190137333	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-6	True	NA	30	True	AATAAA	-12	NA	82373983	82353833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_72481.nic	chr4	-	1138	7	NIC	ENSG00000138668.19	novel	1585	8	NA	NA	387	0	combination_of_known_junctions	FALSE	canonical	3	1908	junction_6	2046.59093915277	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	575	False	NA	-29	True	AATAAA	-17	NA	82373596	82353828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_72490.known	chr4	+	619	2	FSM	ENSG00000272677.2	ENST00000609575.2	736	2	117	0	88	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGACTTTGTTTTC	101	False	NA	9	True	ATTAAA	-19	NA	82374401	82384027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_82374727_82383733
transcript_72491.known	chr4	-	1585	8	FSM	ENSG00000138668.19	ENST00000353341.8	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	4190	junction_2	1238.97880926024	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-9	True	NA	-29	True	AATAAA	-17	NA	82373986	82353828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
transcript_72492.known	chr4	-	1433	10	FSM	ENSG00000152795.18	ENST00000630114.2	1433	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	1194.30684478746	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTTTTCTGCGTCAGG	31	True	NA	27	True	AATAAA	-14	NA	82430408	82424629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_72495.known	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	889.931317574564	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	322	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_725.known	chr1	+	870	1	FSM	ENSG00000120948.19	ENST00000607145.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTAGTAGTCA	0	True	NA	7	True	ATTAAA	-15	NA	11029658	11030528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11029700_11030500
transcript_7250.nic	chr1	+	1548	7	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	265.977077124243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	2	True	NA	22	True	AATAAA	-18	NA	154983350	154993111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154992712_154992787_154992901
transcript_72500.known	chr4	-	1291	8	FSM	ENSG00000152795.18	ENST00000602300.5	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	2074	junction_1	291.866128104468	3000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	-4	True	NA	-27	True	AATAAA	-15	NA	82429441	82424628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_72501.known	chr4	-	2404	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	2322	junction_4	218.13483343005	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	1324	False	NA	-23	True	AATAAA	-19	NA	82429397	82424624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_72502.nnic	chr4	+	1743	6	NNC	ENSG00000145293.17	novel	2083	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	280.811253335759	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	-14	True	NA	15	True	AATAAA	-16	NA	82430584	82461087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_82430659_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_72503.known	chr4	+	2083	6	FSM	ENSG00000145293.17	ENST00000273920.8	2083	6	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	93.3565209291777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTATCATGTGTGTGTT	-9	True	NA	22	True	AAAACA	-24	NA	82430589	82461177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_82430914_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_72504.nnic	chr4	+	1540	5	NNC	ENSG00000145293.17	novel	2083	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	351.26797107052	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	-14	True	NA	15	True	AATAAA	-16	NA	82430584	82461087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_82430659_82447919_82448022_82454721_82454855_82456914_82457039_82459980
transcript_72506.known	chr4	-	3178	8	FSM	ENSG00000249242.8	ENST00000449862.7	3178	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	6.1145527311522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTGTCTCTT	-12	True	NA	-6	True	AATAAA	-17	NA	82561988	82483175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
transcript_72508.known	chr4	-	3296	8	FSM	ENSG00000249242.8	ENST00000515780.6	3296	8	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_7	19.4558631842665	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCTCTTACACCA	8285	False	NA	0	True	AATAAA	-23	NA	82562357	82483169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82562162
transcript_72511.known	chr4	-	4255	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_26	191.949358459511	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	9677	False	NA	-36	True	ATTAAA	-13	NA	82891266	82818661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_72512.known	chr4	-	3801	27	FSM	ENSG00000138674.17	ENST00000508502.5	3801	27	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_5	192.148969113448	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGACATGGACTAGTC	-22	True	NA	NA	False	AAGAAA	-18	NA	82891203	82819010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72518.known	chr4	-	3861	26	FSM	ENSG00000138674.17	ENST00000509142.5	3861	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	229.04250784516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-33	True	NA	-36	True	ATTAAA	-13	NA	82891214	82818661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_72519.known	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	TRUE	canonical	3	397	junction_13	108.973206441869	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	45	True	NA	-35	True	ATTAAA	-14	NA	82891136	82818660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72520.known	chr4	-	3596	25	FSM	ENSG00000138674.17	ENST00000505984.5	3596	25	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_5	146.546914890382	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTCCAAAGAAACATG	33	True	NA	NA	False	NA	NA	NA	82891148	82819043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72521.known	chr4	-	3687	24	FSM	ENSG00000138674.17	ENST00000513858.5	3687	24	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	173.417773044061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	28	True	NA	-35	True	ATTAAA	-14	NA	82891153	82818660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72524.known	chr4	-	3397	21	FSM	ENSG00000138674.17	ENST00000508479.5	3397	21	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_8	180.928411257049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAAAAATC	28	True	NA	NA	False	TTTAAA	-4	NA	82891153	82843684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72525.nic	chr4	-	3373	19	ISM	ENSG00000138674.17	ENST00000505984.5	3596	25	-98	24641	-6	0	5prime_fragment	FALSE	canonical	3	397	junction_7	106.203450224115	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAAAAATC	9697	False	82891254	NA	False	TTTAAA	-4	NA	82891246	82843684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72526.known	chr4	-	3909	26	FSM	ENSG00000138674.17	ENST00000311785.11	3909	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	211.983825798102	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-5	True	NA	-36	True	ATTAAA	-13	NA	82891259	82818661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72530.known	chr4	-	1717	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_11	89.4203556244326	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGGTTGCCAGCG	-3	True	NA	NA	False	AATAAA	-14	NA	82891184	82863210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_72536.nic	chr4	-	1868	6	NIC	ENSG00000251022.6	novel	566	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	163.666001356421	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-20	True	NA	-95	True	AATAAA	-23	NA	82900569	82893544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82899712_82899738_82900076_82900224_82900333
transcript_72537.nic	chr4	-	1830	6	NIC	ENSG00000251022.6	novel	566	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	115.159715178529	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-20	True	NA	-95	True	AATAAA	-23	NA	82900569	82893544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82899712_82899738_82900076_82900224_82900371
transcript_72538.known	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	21.4767315949145	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	22	True	NA	11	True	ATTAAA	-18	NA	82900734	82919969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
transcript_72541.known	chr4	-	2770	5	FSM	ENSG00000251022.6	ENST00000504520.6	2770	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	84.6149366246882	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTGAGCAATTCAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	82900960	82893008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900333
transcript_72542.nic	chr4	-	1805	5	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	112.561927399987	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-20	True	NA	-95	True	AATAAA	-23	NA	82900569	82893544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900371
transcript_72544.nnic	chr4	-	1785	5	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	186.534179173684	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-20	True	NA	-95	True	AATAAA	-23	NA	82900569	82893544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82897988_82898063_82899712_82899738_82900076_82900224_82900333
transcript_72546.known	chr4	-	516	4	FSM	ENSG00000251022.6	ENST00000511271.5	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	159.11700796025	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAACAACACGAATTCT	-17	True	NA	NA	False	NA	NA	NA	82900566	82894794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82894848_82895691_82895775_82900076_82900224_82900333
transcript_72549.nnic	chr4	-	1738	4	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	181.382346317263	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	2	True	NA	-95	True	AATAAA	-23	NA	82900547	82893544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_82894848_82897988_82898063_82900076_82900224_82900333
transcript_72551.known	chr4	-	971	3	FSM	ENSG00000251022.6	ENST00000512932.5	971	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	209.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTAAAGCACAAGAGGA	-10	True	NA	NA	False	AAAACA	-29	NA	82900559	82894249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_82894848_82900076_82900224_82900333
transcript_72555.known	chr4	+	1702	11	FSM	ENSG00000138663.9	ENST00000503682.5	1702	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	226.856540571349	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTACTTTGTTTTTAGTT	15	True	NA	15	True	AATAAA	-23	NA	83035206	83075797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83065059_83065156_83066437_83066554_83068437_83068523_83075296
transcript_72556.known	chr4	+	1695	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	224.784897179504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	33	False	NA	-26	True	NA	NA	NA	83035224	83075756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
transcript_72559.known	chr4	+	1651	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_9	62.7764994953437	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	-9	True	NA	36	True	AATAAA	-44	NA	83035182	83075818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
transcript_72561.known	chr4	+	2273	9	FSM	ENSG00000138663.9	ENST00000509093.5	2273	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	192.830074158571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAGTAGTACTTTGT	NA	False	NA	7	True	AATAAA	-15	NA	83034446	83075789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83075296
transcript_72565.known	chr4	-	786	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.49106001094224	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	4914	False	NA	-1	True	TATAAA	-25	NA	83109843	83090687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
transcript_72567.known	chr4	-	4581	12	FSM	ENSG00000173083.16	ENST00000311412.10	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	4.84981042485423	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	-7	True	NA	NA	False	AATAAA	-20	NA	83334848	83292460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555
transcript_72568.known	chr4	-	1458	11	FSM	ENSG00000173083.16	ENST00000513463.1	1458	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.54718490564528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATATACTAGTCCT	396	False	NA	-27	True	AAGAAA	-26	NA	83334782	83295343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83319343_83319470_83322218_83322365_83334555
transcript_72570.known	chr4	-	932	3	FSM	ENSG00000173083.16	ENST00000680713.1	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGGGCCCTGAGTCA	377	False	NA	NA	False	NA	NA	NA	83334801	83318929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83319470_83322218_83322365_83334555
transcript_72573.known	chr4	-	3543	18	FSM	ENSG00000163312.11	ENST00000295488.8	3543	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_12	9.14663324147083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACGAATAATGTTTGA	20	True	NA	NA	False	TATAAA	-30	NA	83455823	83407345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455396
transcript_72576.known	chr4	-	744	2	FSM	ENSG00000163312.11	ENST00000440639.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCTTACTGAATTACA	20	True	NA	NA	False	AAAACA	-21	NA	83455823	83453756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83453946_83455268
transcript_72577.nic	chr4	-	2190	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-60	44870	-28	1477	5prime_fragment	FALSE	canonical	3	48	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCATAATGTTTTAAGAAA	-40	True	NA	NA	False	AAGAAA	-21	NA	83455883	83452242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_83453946_83455396
transcript_72579.nic	chr4	-	1243	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-60	45817	-28	530	5prime_fragment	FALSE	canonical	3	48	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATAATATTAGTGCAA	-40	True	NA	-9	True	AATAAA	-19	NA	83455883	83453189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_83453946_83455396
transcript_72580.known	chr4	-	574	2	FSM	ENSG00000163312.11	ENST00000515482.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAGAGTGGATATGAA	-12	True	NA	NA	False	NA	NA	NA	83455855	83453719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83453946_83455507
transcript_72592.known	chr4	-	4210	9	FSM	ENSG00000163322.14	ENST00000321945.12	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	19.4277507704829	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCAATGGTAAATC	0	True	NA	-9	True	ATTAAA	-18	NA	83485100	83459516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83484985
transcript_72599.known	chr4	-	2718	8	FSM	ENSG00000163322.14	ENST00000475656.6	2718	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	47.2604593757632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTCAATATTTAAA	-3	True	NA	-17	True	AATAAA	-17	NA	83485103	83460944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83476642_83476680_83482153_83482245_83484985
transcript_726.known	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2518	junction_2	68.1741467545747	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	21	True	NA	-6	True	NA	NA	NA	11060018	11054588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
transcript_72608.known	chr4	+	1550	6	FSM	ENSG00000163319.11	ENST00000295491.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	1552	junction_3	174.493094419235	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTGAAGTAAATGC	-4	True	NA	NA	False	AATAAA	-21	NA	83456057	83462298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972_83461033_83461120
transcript_72616.known	chr4	+	490	5	FSM	ENSG00000163319.11	ENST00000505719.1	490	5	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_3	764.934147492449	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTCCATTAAGCAGAT	28	False	NA	-63	True	NA	NA	NA	83456089	83461328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83460972_83461033_83461120
transcript_72617.known	chr4	+	666	5	FSM	ENSG00000163319.11	ENST00000507019.5	666	5	0	0	0	0	multi-exon	TRUE	canonical	3	326	junction_2	693.869359101553	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATCCCCAAATAGCT	15	False	NA	32	True	AATAAA	-26	NA	83455982	83461423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83456178_83456908_83456959_83459739_83459798_83460972_83461033_83461120
transcript_72620.known	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	860.418631959015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	-7	True	NA	34	True	AATAAA	-40	NA	83456054	83461237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
transcript_72624.known	chr4	+	2928	12	FSM	ENSG00000138678.11	ENST00000264409.5	2928	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	3.33278232360425	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGCATTATTCCCC	1	True	NA	6	True	AATAAA	-16	NA	83536107	83605875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_83536764_83544535_83544603_83581561_83581833_83587254_83587330_83588209_83588300_83590198_83590293_83594844_83594961_83596857_83596914_83597429_83597516_83598050_83598180_83598643_83598724_83604667
transcript_72625.known	chr4	+	3278	5	FSM	ENSG00000180769.10	ENST00000652474.2	3278	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.58602010819715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATACTTTCTCTACTG	NA	False	NA	-7	True	AATAAA	-3	NA	84965629	85008730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_84965859_84969724_84969877_85000690_85000766_85004229_85004328_85006006
transcript_72626.known	chr4	+	3132	5	FSM	ENSG00000180769.10	ENST00000652652.2	3132	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.06201920231798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTACTAAATATGAAAAATAA	1	True	NA	-30	True	NA	NA	NA	84967016	85008707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_84967128_84969724_84969877_85000690_85000766_85004229_85004328_85006011
transcript_72627.known	chr4	+	1620	4	FSM	ENSG00000180769.10	ENST00000650985.1	1620	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTTGACGGAAAATT	60	False	NA	NA	False	AATAAA	-5	NA	84965710	85007233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_84965859_84969724_84969877_85004229_85004328_85006011
transcript_72630.known	chr4	+	3314	4	FSM	ENSG00000180769.10	ENST00000652490.2	3314	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCTCTACTGTTTTC	14	True	NA	-2	True	AATAAA	-8	NA	84966792	85008735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_84967128_84969724_84969877_85004229_85004328_85006006
transcript_72634.nnic	chr4	+	652	3	NNC	ENSG00000180769.10	novel	3314	4	NA	NA	-32	-16248	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	4.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTCTTAATAGCATTT	-63	True	NA	3	True	AATAAA	-19	NA	84966715	84970727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_84967128_84969724_84969877_84970639
transcript_72637.known	chr4	+	2740	8	FSM	ENSG00000138639.18	ENST00000395183.6	2740	8	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	20.7275819395612	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	-3	True	NA	14	True	ATTAAA	-13	NA	85778705	86001223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_85778966_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_72640.nnic	chr4	+	2727	8	NNC	ENSG00000138639.18	novel	725	5	NA	NA	-39256	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	8.82251294665401	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	NA	False	NA	14	True	ATTAAA	-13	NA	85884477	86001223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_85884725_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_72646.nnic	chr4	+	1006	6	NNC	ENSG00000138639.18	novel	725	5	NA	NA	-39204	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	24.8483399847958	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGCATCATTTATGTG	NA	False	NA	9	True	AATAAA	-20	NA	85884529	85975766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_85884725_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85975493
transcript_72659.known	chr4	-	1610	5	FSM	ENSG00000163633.12	ENST00000462714.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.87367006223537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCATGATTTATATTC	11	False	NA	NA	False	AATAAA	-23	NA	86892410	86886796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_86887894_86888120_86888276_86890047_86890139_86891455_86891594_86892281
transcript_72660.known	chr4	-	448	4	FSM	ENSG00000163633.12	ENST00000504008.1	448	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.94422221866655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAAGCGTCTTTGTAA	8	False	NA	NA	False	NA	NA	NA	86892413	86887870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_86887894_86888120_86888276_86891455_86891594_86892281
transcript_72664.known	chr4	-	898	4	FSM	ENSG00000284968.1	ENST00000506484.1	898	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGATATAGTCAAAGAA	1	True	NA	NA	False	AAAAAG	-9	NA	86936179	86925866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_86926327_86932221_86932320_86933394_86933543_86935987
transcript_72667.known	chr4	-	5631	10	FSM	ENSG00000145332.14	ENST00000273963.10	5631	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	7.02376916856849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTAAAAGGTCTGT	3	True	NA	-9	True	ATTAAA	-29	NA	87220618	87160102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87185250_87185800_87195323_87195691_87220417
transcript_72668.known	chr4	-	4049	9	FSM	ENSG00000145332.14	ENST00000425278.6	4049	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	13.838352503098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAAAAAAGCAGAATCAA	20	True	NA	NA	False	NA	NA	NA	87220525	87161042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87195323_87195691_87220417
transcript_72672.nnic	chr4	-	1811	8	NNC	ENSG00000198189.11	novel	1782	7	NA	NA	-70	-95	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	44.5480708027283	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTGTTTCCATCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	87391258	87336609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87374360_87374415_87374698_87374831_87382254_87382363_87390860
transcript_72674.known	chr4	-	1782	7	FSM	ENSG00000198189.11	ENST00000358290.9	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	10.9188929027728	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGATGTGAGGCTCA	-2	True	NA	90	True	AATAAA	-30	NA	87391188	87336514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87374698_87374831_87382254_87382363_87390860
transcript_72683.nic	chr4	+	1339	8	NIC	ENSG00000170502.13	novel	2820	8	NA	NA	-22	429	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	108.62742916661	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTCATCTAGTTCT	NA	False	NA	9	True	AATAAA	-24	NA	87422550	87458347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_87422618_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_72684.known	chr4	+	2458	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	111.96355092035	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTGTGAATTTTAAA	-10	True	NA	9	True	AATAAA	-17	NA	87422596	87459454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_72686.known	chr4	+	2820	8	FSM	ENSG00000170502.13	ENST00000302174.9	2820	8	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	45.460904935461	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTGTGAATTTTAAAC	-34	True	NA	10	True	AATAAA	-18	NA	87422572	87459455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87423013_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_72690.known	chr4	+	951	7	FSM	ENSG00000170502.13	ENST00000440591.6	951	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	127.562729666623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGCTTTATGCCAGTC	-1	True	NA	NA	False	NA	NA	NA	87422808	87457918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87423013_87434980_87435221_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_72696.known	chr4	-	2778	11	FSM	ENSG00000152583.13	ENST00000282470.11	2778	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.53534100123922	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	-6	True	NA	-5	True	AATAAA	-20	NA	87529376	87473334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490272_87490394_87490759_87490879_87491617_87491691_87493581_87494599_87494980_87495128_87499520_87499586_87529044
transcript_727.nic	chr1	-	1215	7	ISM	ENSG00000116649.10	ENST00000376957.7	1260	8	476	0	144	0	3prime_fragment	FALSE	canonical	3	2518	junction_2	34.9368477875914	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	497	False	NA	-6	True	NA	NA	NA	11059542	11054588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224
transcript_72701.known	chr4	+	1986	4	FSM	ENSG00000152595.17	ENST00000361056.4	1982	4	18	-22	10	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGTTGTCTGTGGTG	19	False	NA	NA	False	AATAAA	-42	NA	87832986	87846814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87833015_87834702_87834769_87838631_87838686_87844976
transcript_72704.known	chr4	+	1561	7	FSM	ENSG00000118785.15	ENST00000395080.8	1561	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	32.401988965014	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	0	True	NA	12	True	AATAAA	-23	NA	87975713	87983411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87980392_87980435_87981474_87981799_87982491
transcript_72706.known	chr4	+	1581	6	FSM	ENSG00000118785.15	ENST00000237623.11	1581	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	39.1233945357506	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATTTTGGTTTCAATT	NA	False	NA	27	True	AATAAA	-38	NA	87975666	87983426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87981474_87981799_87982491
transcript_72708.known	chr4	+	1196	6	FSM	ENSG00000118785.15	ENST00000360804.4	1196	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	54.8612796059297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAACTATCACTGTAT	0	True	NA	NA	False	ACTAAA	-38	NA	87975713	87983127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980392_87980435_87981474_87981799_87982491
transcript_72709.known	chr4	+	923	5	FSM	ENSG00000118785.15	ENST00000508233.6	923	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.5819462784596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGAAAAAATACAATTT	0	True	NA	NA	False	NA	NA	NA	87975713	87982896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87981474_87981799_87982491
transcript_72710.known	chr4	-	4206	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	8.8954420288645	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTATGTATTCTTT	-12	True	NA	NA	False	AATAAA	-17	NA	88158639	88090268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
transcript_72717.known	chr4	-	6309	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	9.71968220788222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCAACTGTGT	-1	True	NA	-12	True	AATAAA	-18	NA	88284561	88257619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
transcript_7272.nnic	chr1	+	581	4	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_2	296.383010459252	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	-23	True	NA	22	True	AATAAA	-18	NA	154983325	154993111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_154983398_154983841_154984067_154992712_154992787_154992901
transcript_72721.known	chr4	-	923	6	FSM	ENSG00000163644.15	ENST00000508256.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	20.448960853794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGCAACAGTTTT	112	False	NA	NA	False	NA	NA	NA	88284631	88262576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88284405
transcript_72727.nic	chr4	-	958	4	ISM	ENSG00000163644.15	ENST00000295908.11	1940	6	-28	6879	-16	0	5prime_fragment	FALSE	canonical	3	60	junction_3	11.3431330181157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGGTACTACCACC	0	True	NA	NA	False	AAGAAA	-7	NA	88284606	88268749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_88268907_88277142_88277244_88278143_88278643_88284405
transcript_72729.nic	chr4	+	3638	23	NIC	ENSG00000138642.16	novel	3776	23	NA	NA	34	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.6967980070349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGCATGTCGCTCAAT	-22	True	NA	12	True	AATAAA	-19	NA	88379024	88443096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_88379121_88383184_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
transcript_72730.known	chr4	+	3776	23	FSM	ENSG00000138642.16	ENST00000264346.12	3776	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	6.62576987574131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	1	True	NA	13	True	AATAAA	-20	NA	88378851	88443097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
transcript_72737.known	chr4	-	1311	2	FSM	ENSG00000145337.5	ENST00000273968.5	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-13	True	NA	-20	True	AATAAA	-30	NA	88523776	88520997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88522030_88523497
transcript_72738.nnic	chr4	-	1381	2	NNC	ENSG00000145337.5	novel	1311	2	NA	NA	-9545	-4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCAGTTTGCAGTAGTC	NA	False	NA	-24	True	AATAAA	-26	NA	88533321	88521001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_88522030_88532968
transcript_72739.known	chr4	-	1917	1	FSM	ENSG00000177432.8	ENST00000323061.7	1917	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGACTCGGTACTGT	-3	True	NA	NA	False	AATAAA	-22	NA	88697829	88695912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_88695900_88697800
transcript_7274.known	chr1	+	1803	3	FSM	ENSG00000160688.19	ENST00000368431.7	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	332.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	18	True	NA	14	True	AATAAA	-18	NA	154983366	154989012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154983398_154983841_154984067_154987465
transcript_72747.nic	chr4	-	2175	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	160	0	0	0	intron_retention	FALSE	canonical	3	49	junction_1	13.7679176187089	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	-14	True	NA	-12	True	AATAAA	-8	NA	89057185	88989623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
transcript_7275.nic	chr1	+	1341	3	ISM	ENSG00000160688.19	ENST00000315144.14	1730	8	-169	4099	-148	0	5prime_fragment	FALSE	canonical	3	696	junction_1	100.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	8098	False	NA	14	True	AATAAA	-18	NA	154983189	154989012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_154983398_154983841_154984067_154988104
transcript_72762.known	chr4	+	2010	3	FSM	ENSG00000251095.8	ENST00000513572.3	2019	3	7	2	7	-2	multi-exon	FALSE	canonical	3	12	junction_2	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	7	False	NA	8	True	AATAAA	-18	NA	89681511	89694130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_89681685_89691284_89691406_89692414
transcript_72763.nic	chr4	+	652	3	FSM	ENSG00000251095.8	ENST00000691837.1	648	3	-4	0	-4	0	multi-exon	FALSE	canonical	2	7	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	-4	True	NA	9	True	AATAAA	-18	NA	89681500	89720172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_89681685_89691284_89691406_89719825
transcript_72764.known	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	95.1419991381304	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	25	True	NA	-3	True	AATAAA	-23	NA	89837139	89726052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
transcript_72765.known	chr4	-	3177	6	FSM	ENSG00000145335.17	ENST00000394991.8	3177	6	0	0	0	0	multi-exon	TRUE	canonical	3	258	junction_4	16.2283702200806	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	3	True	NA	-3	True	AATAAA	-21	NA	89837161	89724098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836961
transcript_72766.known	chr4	-	3041	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	96.7313806373092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-10	True	NA	-3	True	AATAAA	-21	NA	89838315	89724098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
transcript_7277.known	chr1	+	757	3	FSM	ENSG00000160688.19	ENST00000487371.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	432.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGGTCAACCTT	44	False	NA	NA	False	NA	NA	NA	154983430	154988433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154983634_154983841_154984067_154988104
transcript_72770.known	chr4	-	570	6	FSM	ENSG00000145335.17	ENST00000506244.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	96.3340023044823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCTCAGTTCCA	-4	True	NA	NA	False	NA	NA	NA	89837168	89726576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89837097
transcript_72779.nnic	chr4	-	550	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-232	5589	at_least_one_novel_splicesite	FALSE	canonical	3	891	junction_1	46	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGCAGACATCTCCT	NA	False	NA	-13	True	ATTAAA	-16	NA	92277307	92263177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_92263356_92269242_92269357_92277049
transcript_72781.known	chr4	+	4844	14	FSM	ENSG00000152208.13	ENST00000611049.4	4844	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_13	19.104508591448	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGCTCTCATACTATT	NA	False	NA	9	True	AATAAA	-11	NA	93084985	93774553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
transcript_72783.nic	chr4	+	2507	13	ISM	ENSG00000152208.13	ENST00000611049.4	4844	14	7	4955	7	-2900	5prime_fragment	FALSE	canonical	3	203	junction_6	15.7709296562448	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGTAAGATCAATATCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	93084992	93769598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209
transcript_72784.nnic	chr4	+	1595	8	NNC	ENSG00000152208.13	novel	4844	14	NA	NA	7	114226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.4909535482564	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTATTATGATGTCATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	93084992	93420548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93420058
transcript_72786.known	chr4	+	5783	16	FSM	ENSG00000152208.13	ENST00000282020.9	5783	16	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	58.5803911067707	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTGAAGTCTTAACTG	-16	True	NA	22	True	AATAAA	-24	NA	92303965	93774566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_92304745_92590130_92590287_93084994_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
transcript_72789.nnic	chr4	-	515	4	NNC	ENSG00000246541.2	novel	1042	9	NA	NA	31867	-46203	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.8162545173751	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCTATTATGATAGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	94175689	94163994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_94164232_94165115_94165197_94165847_94165926_94175570
transcript_72790.known	chr4	+	5017	24	FSM	ENSG00000163104.18	ENST00000359052.8	5017	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	57.6282329463101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	-10	True	NA	15	True	AATAAA	-16	NA	94207610	94291290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_72793.known	chr4	+	4649	24	FSM	ENSG00000163104.18	ENST00000457823.6	4649	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	55.8308273756017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTAATTTTTGGAAA	142	False	NA	101	True	AATAAA	-18	NA	94207844	94290821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_72794.known	chr4	+	5094	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_18	51.1679838462341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	-12	True	NA	17	True	AATAAA	-18	NA	94207864	94291292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_72798.nic	chr4	+	1357	5	ISM	ENSG00000163104.18	ENST00000510105.5	2409	17	-6	39648	-5	-36189	5prime_fragment	FALSE	canonical	3	145	junction_1	34.7014048706965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATCACCTGACCCTA	-17	True	NA	NA	False	ACTAAA	-11	NA	94207859	94237511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951
transcript_72799.nic	chr4	+	2810	2	ISM	ENSG00000163104.18	ENST00000510105.5	2409	17	-6	66215	-5	-62756	5prime_fragment	FALSE	canonical	3	145	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAAATGTCTTTA	-17	True	NA	NA	False	NA	NA	NA	94207859	94210944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_94208071_94208345
transcript_7280.known	chr1	+	2189	7	FSM	ENSG00000160688.19	ENST00000292180.8	2189	7	0	0	0	0	multi-exon	TRUE	canonical	3	508	junction_2	133.821709748456	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	-5	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_72802.known	chr4	+	6043	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	31.2786535302699	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	0	True	NA	23	True	AATAAA	-23	NA	94451941	94668223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_72806.known	chr4	+	2979	13	FSM	ENSG00000163110.15	ENST00000542407.5	2979	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	65.8054265746121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGAGAGAGAAT	14	False	NA	NA	False	NA	NA	NA	94451955	94665500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575942_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_7281.known	chr1	+	2936	23	FSM	ENSG00000143537.14	ENST00000356955.7	2936	23	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_19	27.0718740325889	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	-4	True	NA	30	True	AATAAA	-21	NA	155051315	155062775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155061976_155062244_155062370_155062459
transcript_72810.nic	chr4	+	593	4	NIC	ENSG00000163110.15	novel	463	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	123.307204439427	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	157	False	NA	28	True	AATAAA	-30	NA	94451885	94549986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
transcript_72811.known	chr4	+	743	4	FSM	ENSG00000163110.15	ENST00000509333.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	32.6224190124249	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTAATAACATTTT	199	False	NA	NA	False	AATAAA	-30	NA	94451927	94573735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350
transcript_72812.known	chr4	+	538	3	FSM	ENSG00000163110.15	ENST00000504489.3	538	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATCTTCTTTTACTCAA	0	True	NA	NA	False	AATAAA	-8	NA	94451941	94456164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94455818
transcript_72813.nic	chr4	+	907	3	ISM	ENSG00000163110.15	ENST00000509333.5	743	4	-42	49353	0	-25604	5prime_fragment	FALSE	canonical	3	270	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGTGTAT	157	False	NA	NA	False	NA	NA	NA	94451885	94524382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_94451996_94455246_94455385_94523723
transcript_72814.known	chr4	+	1189	3	FSM	ENSG00000163110.15	ENST00000359265.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTAACGGAGTCTCCT	157	False	NA	NA	False	ATTAAA	-16	NA	94451885	94457184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_94451996_94455246_94455385_94456243
transcript_7282.nnic	chr1	+	1399	5	NNC	ENSG00000243364.8	novel	1254	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.2777696174428	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	-5	True	NA	35	True	AATAAA	-29	NA	155063713	155069553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_155063937_155064441_155064561_155066729_155067017_155067371_155067441_155068852
transcript_72824.nnic	chr4	-	3811	5	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	17.5926120857592	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	97141396	97107370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97110427_97111212_97111426_97134546_97134736_97139504_97139759_97141297
transcript_7283.known	chr1	+	1254	4	FSM	ENSG00000243364.8	ENST00000368409.8	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	8.33999733546454	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	-6	True	NA	35	True	AATAAA	-29	NA	155063739	155069553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068852
transcript_72833.nnic	chr4	-	1816	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_2	0.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTTGCTTATTTT	NA	False	NA	-30	True	AATAAA	-26	NA	97141464	97133340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_97134736_97139504_97139759_97141297
transcript_72838.known	chr4	+	2092	15	FSM	ENSG00000138698.15	ENST00000339360.9	2092	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	38.5360287290229	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	61	False	NA	NA	False	NA	NA	NA	98261517	98442334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_7284.known	chr1	+	1052	4	FSM	ENSG00000243364.8	ENST00000427683.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	40.1331118487798	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	15	True	NA	20	True	AATAAA	-14	NA	155063760	155069538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155069018
transcript_72842.known	chr4	+	1942	14	FSM	ENSG00000138698.15	ENST00000408900.7	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	43.8855423619484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	61	False	NA	NA	False	NA	NA	NA	98261517	98442334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_72844.known	chr4	+	1686	13	FSM	ENSG00000138698.15	ENST00000264572.11	1686	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.0162448898658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCCCGATACACGGCA	31	False	NA	NA	False	NA	NA	NA	98261430	98442117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_72846.nnic	chr4	+	1068	8	NNC	ENSG00000138698.15	novel	3747	15	NA	NA	0	4476	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	66.6033032213869	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAAAACTCTCATTCAT	4	True	NA	NA	False	AATAAA	-21	NA	98261460	98409062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98408862
transcript_7285.nic	chr1	+	1733	4	ISM	ENSG00000143590.14	ENST00000368408.4	1817	5	6105	0	-574	0	3prime_fragment	FALSE	canonical	3	115	junction_1	10.7806410858642	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	6033	False	NA	NA	False	AATAAA	-17	NA	155084941	155087538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_155085405_155085876_155085943_155086127_155086206_155086412
transcript_72850.known	chr4	+	875	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	54.9836339286519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTATGAGAG	46	False	NA	4	True	AGTAAA	-17	NA	98261502	98392252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
transcript_72854.known	chr4	+	941	5	FSM	ENSG00000138698.15	ENST00000511379.5	941	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	24.3977457975117	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGAGTAGCTTTAAAAT	3	True	NA	NA	False	AATAAA	-36	NA	98261459	98379490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016
transcript_72855.known	chr4	-	1191	8	FSM	ENSG00000168785.8	ENST00000505184.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	69.8076073276855	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTTGTCCTCA	1093	False	NA	NA	False	AAAAAG	-45	NA	98657692	98472209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98657539
transcript_72856.known	chr4	-	898	8	FSM	ENSG00000151247.13	ENST00000505992.1	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	1015.47453469412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGAGAAGTCTCATTCG	1	True	NA	NA	False	TTTAAA	-29	NA	98929133	98880897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98881143_98884921_98885062_98886453_98886547_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_7286.known	chr1	+	776	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	52.6898683071254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCCCATTGCTCTCCTC	6613	False	NA	NA	False	NA	NA	NA	155085521	155086923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
transcript_72860.known	chr4	-	1132	8	FSM	ENSG00000151247.13	ENST00000504432.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	1025.48564901052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	9	True	NA	NA	False	NA	NA	NA	98929125	98880844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98909677_98909960_98929094
transcript_72868.known	chr4	-	2427	7	FSM	ENSG00000151247.13	ENST00000450253.7	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_6	341.078518167819	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCATTGTAAAATTT	1	True	NA	-4	True	AATAAA	-17	NA	98929133	98879275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_72869.known	chr4	-	1097	7	FSM	ENSG00000151247.13	ENST00000280892.10	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	846.036527317559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTGTAATAGTTCAG	3558	False	NA	NA	False	CATAAA	-12	NA	98929092	98880764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98928894
transcript_7288.known	chr1	+	763	3	FSM	ENSG00000143590.14	ENST00000470294.5	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCACTGCCTGCTGCTTC	6607	False	NA	NA	False	NA	NA	NA	155085515	155086982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155085643_155085876_155085943_155086412
transcript_7289.known	chr1	+	1552	5	FSM	ENSG00000169242.12	ENST00000368407.8	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.58457697592217	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGCTAAGTGCGAGGC	1	True	NA	74	True	ATTAAA	-16	NA	155127875	155134899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155128070_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_72890.known	chr4	+	2686	11	FSM	ENSG00000164024.12	ENST00000296411.11	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_9	39.9854973709219	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	-10	True	NA	27	True	ATTAAA	-21	NA	98995720	99062809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
transcript_72895.nic	chr4	+	2654	10	NIC	ENSG00000164024.12	novel	2686	11	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	144.346376965998	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	1	True	NA	27	True	ATTAAA	-21	NA	98995608	99062809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99057752_99057819_99061153
transcript_72902.known	chr4	-	2652	9	FSM	ENSG00000197894.12	ENST00000296412.14	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_8	205.407521770747	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGGTGGTGGTAAGT	NA	False	NA	16	True	AATAAA	-22	NA	99088788	99070977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99072442_99072572_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_72903.known	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_5	244.553797762374	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	9	True	NA	NA	False	NA	NA	NA	99088717	99075224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_72907.known	chr4	-	3516	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.99591753402052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTGCTGAAATACAGA	-12	True	NA	NA	False	AATAAA	-42	NA	99564017	99546708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
transcript_72909.known	chr4	-	3547	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	12.0559918204812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTCTGCTGAAATACA	-4	True	NA	NA	False	AATAAA	-40	NA	99564039	99546710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
transcript_7292.known	chr1	+	1444	4	FSM	ENSG00000169242.12	ENST00000368406.2	1444	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	14.1656862405839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	1	True	NA	32	True	AATAAA	-19	NA	155127875	155134857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155128070_155131338_155131635_155133729_155133781_155133954
transcript_72920.known	chr4	-	3694	8	FSM	ENSG00000145331.14	ENST00000273962.7	3694	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.8791046471903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGCATCAAAAAATATA	367	False	NA	NA	False	AATAAA	-24	NA	99563668	99546726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563367
transcript_72924.known	chr4	-	4163	7	FSM	ENSG00000109270.13	ENST00000499666.7	4163	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_5	28.3117564901148	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTGGACATATGTGTAT	-11	True	NA	NA	False	AAGAAA	-31	NA	99894427	99878335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_72926.known	chr4	-	961	6	FSM	ENSG00000109270.13	ENST00000515100.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	135.90790999791	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTTTCCTTTGTACAT	-12	True	NA	-8	True	AATAAA	-13	NA	99894428	99881492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99894334
transcript_72928.known	chr4	-	1220	7	FSM	ENSG00000109270.13	ENST00000226522.8	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	135.668714153264	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGAGCACTGTATAGG	40	True	NA	-43	True	AATAAA	-19	NA	99894376	99881206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99882068_99884061_99884126_99885541_99885655_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_72929.known	chr4	-	5967	8	FSM	ENSG00000164031.17	ENST00000442697.7	5967	8	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_5	14.0900891496434	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTTATCATGTTT	3919	False	99946632	4	True	AATAAA	-23	NA	99946618	99896247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
transcript_72933.known	chr4	-	561	4	FSM	ENSG00000164031.17	ENST00000471738.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	62.230753383409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTGTTGTTTTGCGTG	3963	False	NA	4	True	AATAAA	-27	NA	99946574	99923680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99923878_99924759_99924816_99930449_99930622_99946438
transcript_72934.known	chr4	-	960	3	FSM	ENSG00000164031.17	ENST00000474664.5	960	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTTTATTTTCC	3977	False	NA	NA	False	TTTAAA	-26	NA	99946560	99922519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99923186_99930449_99930622_99946438
transcript_72935.known	chr4	+	1647	2	FSM	ENSG00000245322.7	ENST00000666876.1	1647	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTGGAGAGGGATGAAA	11	False	NA	NA	False	AGTAAA	-25	NA	99950544	99952424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_99950681_99950913
transcript_72938.known	chr4	-	1843	2	FSM	ENSG00000164032.12	ENST00000511348.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	11803	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGTATTAAATTTGCT	-1	True	NA	-33	True	AATAAA	-17	NA	99950355	99948085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99949741_99950167
transcript_72939.known	chr4	-	868	5	FSM	ENSG00000164032.12	ENST00000651623.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	1	129	junction_1	5302.10656249004	13026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-7	True	NA	-35	True	AATAAA	-15	NA	99950280	99948087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_99948524_99948813_99948941_99949272_99949387_99949662_99949741_99950167
transcript_7294.nic	chr1	+	1371	6	NIC	ENSG00000169241.19	novel	1298	6	NA	NA	-17	0	intron_retention	FALSE	canonical	3	15	junction_5	122.458809401366	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	417	False	NA	12	True	AATAAA	-17	NA	155135794	155138851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138161
transcript_72940.known	chr4	-	2604	3	FSM	ENSG00000145358.6	ENST00000273990.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTCTTTTTTT	-2	True	NA	-3	True	AATAAA	-18	NA	100190468	100185869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_100188168_100189892_100190033_100190302
transcript_72941.known	chr4	+	790	2	FSM	ENSG00000254531.2	ENST00000527564.2	822	2	28	4	4	0	multi-exon	FALSE	canonical	3	8	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGTTTTATTTCCA	10	True	NA	15	True	AATAAA	-15	NA	101347779	101348883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_101348010_101348323
transcript_72942.known	chr4	+	442	2	FSM	ENSG00000254531.2	ENST00000529296.2	648	2	40	166	16	-162	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCGCCACAGAGTC	22	False	NA	NA	False	NA	NA	NA	101347791	101348721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_101347836_101348323
transcript_72943.known	chr4	-	3238	8	FSM	ENSG00000138821.14	ENST00000394833.6	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	34.3546925173139	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	340	False	NA	-2	True	ATTAAA	-42	NA	102345139	102261665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
transcript_72946.known	chr4	-	673	3	FSM	ENSG00000248161.5	ENST00000502883.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431249	102418601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102418989_102419696_102419795_102431061
transcript_72947.nnic	chr4	-	686	3	NIC	ENSG00000248161.5	novel	610	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431258	102418601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_102418989_102430396_102430499_102431061
transcript_72948.known	chr4	-	608	2	FSM	ENSG00000248161.5	ENST00000505709.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431282	102418601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102418989_102431061
transcript_7295.known	chr1	+	1298	6	FSM	ENSG00000169241.19	ENST00000368404.9	1298	6	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	90.4070793688193	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	5	True	NA	14	True	AATAAA	-19	NA	155135851	155138853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_72953.known	chr4	-	4001	17	FSM	ENSG00000109323.11	ENST00000647097.2	4001	17	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_15	18.3982633351629	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCTCAAGGGCTGGG	26	False	102760981	NA	False	AATAAA	-7	NA	102760968	102630769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
transcript_72955.known	chr4	-	2577	16	FSM	ENSG00000109323.11	ENST00000505239.1	2577	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	29.9387522934555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAACAGAGACAAGGAGAG	11	True	NA	NA	False	AATAAA	-30	NA	102760933	102631987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102723861_102723968_102726588_102726684_102760717
transcript_72956.known	chr4	-	582	2	FSM	ENSG00000109323.11	ENST00000507358.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGCTGTGTATGTTG	0	True	NA	NA	False	AATGAA	-20	NA	102760994	102753690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102753996_102760717
transcript_7296.known	chr1	+	890	6	FSM	ENSG00000169241.19	ENST00000488609.5	890	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	151.314242555022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTGGGGCCTAGGA	20	True	NA	NA	False	GATAAA	-28	NA	155135866	155138440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136397_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_72960.known	chr4	-	574	8	FSM	ENSG00000109332.20	ENST00000502404.5	574	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1645.49428092942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	-2	True	NA	-60	True	NA	NA	NA	102825780	102797398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825721
transcript_72961.known	chr4	-	577	8	FSM	ENSG00000109332.20	ENST00000507845.5	577	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1647.14062693443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTGGAATAAACTTTAA	-7	True	NA	-46	True	NA	NA	NA	102825785	102797384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825737
transcript_72963.known	chr4	-	3729	8	FSM	ENSG00000109332.20	ENST00000453744.7	3729	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1198.44547269386	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	1	True	NA	-1	True	ATTAAA	-18	NA	102827551	102794382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_72965.known	chr4	-	2368	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1498.1571400646	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	235	False	NA	-23	True	AATAAA	-17	NA	102827948	102795975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
transcript_72966.known	chr4	-	2227	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1399.8698627562	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	6	True	NA	-23	True	AATAAA	-17	NA	102828159	102795975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
transcript_72967.known	chr4	-	896	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1484.59358830927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGTTCTTCCAGCTT	17	True	NA	87	True	NA	NA	NA	102868875	102797251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
transcript_72973.known	chr4	-	838	8	FSM	ENSG00000109332.20	ENST00000349311.12	838	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1481.7266954469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	-43	True	NA	75	True	NA	NA	NA	102827849	102797263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827734
transcript_7298.known	chr1	+	1137	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	138.400686414483	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGATGGTTCATTCTCTA	3	True	NA	13	True	AATAAA	-18	NA	155135849	155138852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
transcript_7299.known	chr1	+	778	5	FSM	ENSG00000169241.19	ENST00000490276.5	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	140.65116423265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCAAAGAAAAAGCTTTAC	-19	True	NA	NA	False	GATAAA	-3	NA	155135827	155138415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138161
transcript_72997.known	chr4	-	527	7	FSM	ENSG00000109332.20	ENST00000505207.5	527	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1580.03762261817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTACTGTTCCTTTTTTG	-2	True	NA	-28	True	AATAAA	-5	NA	102825780	102797366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825721
transcript_72998.known	chr4	-	711	7	FSM	ENSG00000109332.20	ENST00000350435.11	711	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1580.504736539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCCAGCTTTGGAC	0	True	NA	92	True	NA	NA	NA	102825860	102797246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825737
transcript_72999.known	chr4	-	660	7	FSM	ENSG00000109332.20	ENST00000357194.10	660	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1573.05664940021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTGATTTTCTTAT	-4	True	NA	-18	True	AATAAA	-15	NA	102868896	102797356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102868714
transcript_73.known	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_10792_10882_11243_11403
transcript_7300.known	chr1	+	1166	5	FSM	ENSG00000169241.19	ENST00000650403.1	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	105.057127316522	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	11	True	NA	12	True	AATAAA	-17	NA	155135857	155138851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138179
transcript_73010.known	chr4	+	883	2	FSM	ENSG00000246560.3	ENST00000501133.3	1351	2	444	24	-233	-24	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTTTGCAGTCCACT	89	False	NA	NA	False	NA	NA	NA	102828054	102844075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102828186_102843323
transcript_73017.known	chr4	+	471	4	FSM	ENSG00000145354.12	ENST00000574446.1	471	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	492.025970407615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACATAATAAACACAATGAA	-7	True	NA	NA	False	NA	NA	NA	102869053	102887359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102869188_102882770_102882874_102885215_102885431_102887340
transcript_73020.known	chr4	+	852	4	FSM	ENSG00000145354.12	ENST00000646632.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	492.550505024612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCTATGGATCCAAAG	-23	True	NA	NA	False	AATAAA	-34	NA	102868973	102887681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102869188_102882791_102882874_102885215_102885431_102887340
transcript_73021.known	chr4	+	1738	4	FSM	ENSG00000145354.12	ENST00000643561.1	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.828075596732	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTTTGTGCTTTTTA	-21	True	NA	26	True	AATAAA	-17	NA	102869321	102888567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102869456_102874509_102874672_102885215_102885431_102887340
transcript_73025.known	chr4	+	5878	3	FSM	ENSG00000145354.12	ENST00000273986.10	5878	3	0	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_2	47.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATTTCCTGTAATT	-5	True	NA	NA	False	AATAAA	-19	NA	102868991	102892807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_102869188_102885215_102885431_102887340
transcript_73034.nic	chr4	-	1200	11	NIC	ENSG00000164039.15	novel	2920	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	150.32235362713	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-12	True	NA	-8	True	AATAAA	-15	NA	103099880	103079476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103097635_103097755_103099782
transcript_73035.nic	chr4	-	1230	11	NIC	ENSG00000164039.15	novel	2920	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	140.140964746215	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-2	True	NA	-8	True	AATAAA	-15	NA	103099870	103079476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_73036.known	chr4	-	1742	10	FSM	ENSG00000164039.15	ENST00000475058.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	119.11038556993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTGTAATCTCTTCT	9	True	NA	29	True	NA	NA	NA	103099816	103079532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103085698_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_73037.known	chr4	-	2920	10	FSM	ENSG00000164039.15	ENST00000296424.9	2920	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_9	38.5403428201068	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGATCTGAGTTAGTCT	-9	True	NA	NA	False	AATAAA	-38	NA	103099834	103077591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_73040.known	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_8	39.2515923243886	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-3	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_73042.known	chr4	-	8260	53	NNC	ENSG00000138778.14	novel	8541	49	NA	NA	36	-236	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	34.3888957927723	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGATAGCAATACCTT	-17	True	NA	-70	True	AATGAA	-19	NA	103198409	103106046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136172_103136279_103136360_103138350_103138450_103139788_103139942_103139942_103139952_103139952_103139962_103139962_103140080_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_73043.known	chr4	-	8742	47	FSM	ENSG00000138778.14	ENST00000380026.8	8742	47	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	30.1846945404298	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTGTGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	103198445	103105348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138453_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_73047.nic	chr4	-	2050	10	NIC	ENSG00000138778.14	novel	8742	47	NA	NA	27	-5043	intron_retention	FALSE	canonical	3	34	junction_2	7.02025288841392	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAAATGAGAAAT	NA	False	NA	NA	False	AAAACA	-21	NA	103198418	103182082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_73052.known	chr4	+	881	4	FSM	ENSG00000248740.7	ENST00000656104.1	881	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	NA	False	NA	7	True	AATAAA	-16	NA	103255825	103453755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_103256295_103343091_103343236_103436934_103437047_103453599
transcript_73053.known	chr4	-	5359	5	FSM	ENSG00000169836.5	ENST00000304883.3	5359	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	5.40254569624358	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTTACTACTTTCCTA	-2	True	NA	NA	False	ATTAAA	-20	NA	103719985	103586030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_103589995_103591486_103591684_103656193_103656345_103658214_103658404_103719127
transcript_73057.known	chr4	-	3130	3	FSM	ENSG00000168772.11	ENST00000466963.1	3130	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACTGTGTGTTTTATA	-6	True	NA	NA	False	AATGAA	-18	NA	104494901	104469513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_104472367_104494505_104494582_104494700
transcript_73058.known	chr4	-	5569	3	FSM	ENSG00000168772.11	ENST00000394767.3	5569	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTATTTTTCCATGAT	1	True	NA	-6	True	AATAAA	-19	NA	104494894	104468307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_104472367_104490743_104492060_104494700
transcript_73059.known	chr4	-	1177	13	FSM	ENSG00000138777.20	ENST00000509031.5	1177	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	240.951066954821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-3	True	NA	-1	True	AATAAA	-21	NA	105474014	105369560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456247_105456292_105456680_105456746_105473893
transcript_7306.known	chr1	+	1003	4	FSM	ENSG00000169241.19	ENST00000368405.7	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	146.13540144522	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	12	True	NA	12	True	AATAAA	-17	NA	155135858	155138851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135992_155136298_155136377_155137978_155138099_155138179
transcript_73062.known	chr4	-	1665	12	FSM	ENSG00000138777.20	ENST00000341695.10	1665	12	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_6	51.2240258711308	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTTACTTTCATTT	3	True	NA	-16	True	AATAAA	-18	NA	105474062	105369076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_73063.nic	chr4	-	1109	11	NIC	ENSG00000138777.20	novel	1665	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	183.975786450283	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	6	True	NA	-5	True	AATAAA	-17	NA	105474059	105369564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105473893
transcript_73065.known	chr4	-	1414	11	FSM	ENSG00000138777.20	ENST00000348706.9	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	172.855691257187	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	1	True	NA	NA	False	NA	NA	NA	105474064	105369242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_73067.known	chr4	-	1072	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	199.232415925611	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-2	True	NA	-5	True	AATAAA	-17	NA	105474067	105369564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
transcript_73072.known	chr4	-	859	8	FSM	ENSG00000138777.20	ENST00000432483.6	859	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	234.084669837777	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	15	True	NA	-5	True	AATAAA	-17	NA	105474050	105369564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105456680_105456746_105473893
transcript_73073.known	chr4	-	778	8	FSM	ENSG00000138777.20	ENST00000457404.6	778	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	223.795734124324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTGGATGCAGCCCTA	3	True	NA	NA	False	NA	NA	NA	105474062	105405837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105405949_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_73075.known	chr4	-	667	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_5	259.885821083029	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	15	True	NA	-5	True	AATAAA	-17	NA	105474050	105369564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
transcript_73077.known	chr4	-	631	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_3	47.4150556258242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCTATACTCAAGTT	6	True	NA	-1	True	AATAAA	-18	NA	105474059	105446201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_73078.known	chr4	-	804	2	FSM	ENSG00000138777.20	ENST00000502610.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCCAGGAGAACTGATG	33	False	NA	NA	False	NA	NA	NA	105474032	105456080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105456746_105473893
transcript_73080.nic	chr4	-	1839	9	NIC	ENSG00000138785.16	novel	1718	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	85.7551018890422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	5	True	NA	0	True	AATAAA	-17	NA	105708672	105682626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105702885_105703024_105703647_105703810_105708637
transcript_73082.known	chr4	-	1718	8	FSM	ENSG00000138785.16	ENST00000340139.10	1718	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	57.3378814838953	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	-12	True	NA	0	True	AATAAA	-17	NA	105708689	105682626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105703647_105703810_105708637
transcript_73083.nic	chr4	-	2242	7	NIC	ENSG00000138785.16	novel	1927	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_6	73.6215925451826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	21	True	NA	0	True	AATAAA	-17	NA	105708656	105682626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105707918
transcript_73084.known	chr4	-	1975	7	FSM	ENSG00000138785.16	ENST00000451321.6	1975	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	51.1351694585591	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	NA	False	NA	0	True	AATAAA	-17	NA	105709108	105682626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105708637
transcript_73088.known	chr4	+	2228	6	FSM	ENSG00000138780.15	ENST00000484843.1	2228	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	13.5292276202302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	-12	True	NA	NA	False	TTTAAA	-3	NA	105708786	105823690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953
transcript_73089.known	chr4	+	4304	12	FSM	ENSG00000138780.15	ENST00000515279.6	4304	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	13.3094138063165	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	-15	True	NA	9	True	AATAAA	-21	NA	105708783	105847725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823070_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
transcript_73093.known	chr4	-	7961	26	FSM	ENSG00000145348.17	ENST00000394708.7	7961	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	23.9407936376387	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTCTAATTGGTAC	-11	True	NA	NA	False	AATAAA	-14	NA	106316209	106041598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315930
transcript_73099.nic	chr4	-	1219	3	ISM	ENSG00000145348.17	ENST00000361687.8	3312	24	-16	248406	-11	670	5prime_fragment	FALSE	canonical	0	0	junction_2	49	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTTCCTGTATTTTT	-2	True	NA	NA	False	NA	NA	NA	106316246	106294485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_106295167_106308767_106308990_106315930
transcript_731.known	chr1	-	2796	25	FSM	ENSG00000171824.14	ENST00000376936.9	2796	25	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_8	48.5188250979853	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-15	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_73100.known	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	268.212830507751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	4	True	NA	-39	True	AATAAA	-12	NA	106316549	106347704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_73104.known	chr4	+	2773	7	FSM	ENSG00000164022.18	ENST00000672341.1	2773	7	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	43.5418062198721	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGCATCATCAGTAG	4	True	NA	NA	False	AATAAA	-28	NA	106316549	106349456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_73108.known	chr4	+	2710	7	FSM	ENSG00000164022.18	ENST00000673123.1	2710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	228.901482932918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTCATTCTTTTGGG	9	True	NA	-28	True	AATGAA	-24	NA	106316554	106349183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316810_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_7311.nic	chr1	+	1333	3	NIC	ENSG00000169241.19	novel	1003	4	NA	NA	8	0	intron_retention	FALSE	canonical	3	79	junction_1	175	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	-11	True	NA	12	True	AATAAA	-17	NA	155135835	155138851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_155136377_155137978_155138099_155138179
transcript_73116.known	chr4	+	2001	1	FSM	ENSG00000164022.18	ENST00000682186.1	2001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAATTACTATATTC	7	True	NA	NA	False	AAGAAA	-10	NA	106316522	106318523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316500_106318500
transcript_73117.known	chr4	+	1101	7	FSM	ENSG00000164022.18	ENST00000684504.1	1101	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	222.920763202234	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGGCTCATTTTTGC	-10	True	NA	28	True	AATAAA	-31	NA	106316535	106347771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337042_106347530
transcript_7312.known	chr1	+	596	3	FSM	ENSG00000169241.19	ENST00000484027.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	210	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTTGGGAGGCCAAGG	32	False	NA	NA	False	NA	NA	NA	155136315	155138574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155136397_155137978_155138099_155138179
transcript_73125.known	chr4	-	2513	12	FSM	ENSG00000138801.9	ENST00000265174.5	2513	12	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_6	44.6034872446109	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGATCTATTTTATA	-2	True	NA	-8	True	AATAAA	-21	NA	107720234	107613665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_107614388_107631630_107631861_107644801_107645071_107653490_107653627_107654694_107654901_107656895_107657008_107659958_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_7313.known	chr1	+	1245	5	FSM	ENSG00000169241.19	ENST00000622581.4	1245	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	167.616191043706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTCATTCTCTACTCAT	1	True	NA	18	True	AATAAA	-23	NA	155135811	155138857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155135973_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_73137.nnic	chr4	-	1126	6	NNC	ENSG00000138801.9	novel	579	5	NA	NA	-41	-10543	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	240.123634821731	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTTGTGTTCACAGTT	-43	False	NA	-21	True	AATAAA	-41	NA	107720275	107670502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_107670864_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_73139.known	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	21.3331207472401	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	-6	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_7314.known	chr1	-	396	2	FSM	ENSG00000179085.8	ENST00000368400.5	396	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	6	True	NA	-4	True	ATTAAA	-20	NA	155140531	155139890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155140246_155140490
transcript_73145.known	chr4	+	1327	7	FSM	ENSG00000138796.18	ENST00000639335.1	1327	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	129.725886219966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATAGTCTGTGAAGC	-18	True	NA	NA	False	NA	NA	NA	107989828	108034762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_73146.known	chr4	+	1752	9	FSM	ENSG00000138796.18	ENST00000403312.6	1752	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	148.70939571863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAATACACTCAAATGA	1	True	NA	-29	True	TATAAA	-1	NA	107989895	108035118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108028860_108028870_108033175_108033293_108034238
transcript_73147.known	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_5	10818.5164713097	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	25	False	NA	30	True	TATAAA	-25	NA	108620655	108630412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
transcript_73149.known	chr4	+	529	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	2142	junction_1	9300.97281202348	2828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	-5	True	NA	16	True	AATAAA	-43	NA	108620589	108625255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_7315.known	chr1	-	486	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	NA	False	NA	-4	True	ATTAAA	-20	NA	155140595	155139890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155140272_155140490
transcript_73155.known	chr4	+	663	5	FSM	ENSG00000198856.13	ENST00000512478.2	663	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	1450.17677801708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGGAAGCGTATTGAA	-3	True	NA	-61	True	AGTAAA	-17	NA	108650646	108667395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108663232_108663307_108667246
transcript_73157.known	chr4	+	1062	4	FSM	ENSG00000198856.13	ENST00000361564.9	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	2708	junction_3	102.795373869104	2783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTATATTTGTTTTT	-15	True	NA	29	True	AATAAA	-17	NA	108650598	108667820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108667246
transcript_73162.known	chr4	+	876	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1447	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTTATATTTGTTT	NA	False	NA	27	True	AATAAA	-15	NA	108650584	108667818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_108650795_108655563_108655658_108667246
transcript_73164.known	chr4	-	2086	13	FSM	ENSG00000164089.9	ENST00000296486.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.50792752997486	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAAAAATTACTAG	-2	True	NA	NA	False	AATAAA	-14	NA	108763053	108742052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762842
transcript_73171.known	chr4	-	957	3	FSM	ENSG00000247950.8	ENST00000499359.2	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCACTTATGTTGATG	NA	False	NA	NA	False	AATAAA	-24	NA	109433817	109429962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_109430781_109431691_109431747_109433733
transcript_73173.nnic	chr4	+	1470	8	NIC	ENSG00000005059.16	novel	581	6	NA	NA	338	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_1	92.07583387444	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTTGAAGTTCTCAA	235	False	NA	17	True	ATTAAA	-17	NA	109560583	109687716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_109561018_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
transcript_73175.known	chr4	-	1634	7	FSM	ENSG00000138794.10	ENST00000265164.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	10.3869576339219	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTACATTTTTCTA	-15	True	NA	-26	True	AATAAA	-15	NA	109703445	109688627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703355
transcript_73179.nnic	chr4	-	1352	7	NNC	ENSG00000138794.10	novel	1634	7	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	110.647714240587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAGAGAACTGCCTTA	61	False	NA	-12	True	TTTAAA	-9	NA	109703369	109688901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703287
transcript_73185.nic	chr4	-	1091	3	ISM	ENSG00000138794.10	ENST00000505486.1	538	4	162	2206	-2	-2206	5prime_fragment	FALSE	canonical	3	312	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGCCTGAGTTATT	9	True	NA	NA	False	NA	NA	NA	109703421	109696786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_109697769_109698299_109698343_109703355
transcript_73186.known	chr4	-	5219	4	FSM	ENSG00000123739.11	ENST00000243501.10	5219	4	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	51.3830927662225	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTCATCTTTTAT	-23	True	NA	-2	True	AATAAA	-13	NA	109730070	109709988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_109714496_109717547_109717714_109718682_109718760_109729601
transcript_73193.known	chr4	+	1011	7	FSM	ENSG00000109534.17	ENST00000394631.7	1011	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	155.259728627012	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGAGTGTGTTTATTAA	-11	True	NA	21	True	AATAAA	-21	NA	109815509	109824740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_109815546_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_73196.known	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	64.5327221045434	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	-1	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_73198.nic	chr4	+	1198	7	NIC	ENSG00000109534.17	novel	1015	7	NA	NA	18	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_1	141.171290754648	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	17	True	NA	18	True	AATAAA	-18	NA	109815779	109824737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_109816006_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_732.nic	chr1	-	2822	25	NIC	ENSG00000171824.14	novel	2796	25	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_5	136.621530910517	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	11099880	11066617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070989_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_7320.known	chr1	+	3082	10	FSM	ENSG00000163462.19	ENST00000611379.1	3082	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	8.82896467791953	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCATTCCTGTGAGTT	168	False	NA	35	True	AATAAA	-35	NA	155174753	155184971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155174838_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_73202.nnic	chr4	+	1026	6	NIC	ENSG00000109534.17	novel	1015	7	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	162.939252483863	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	4	True	NA	18	True	AATAAA	-18	NA	109815524	109824737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_109815805_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_73210.known	chr4	-	6454	5	FSM	ENSG00000170522.10	ENST00000394607.7	6454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	124.8466559424	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-1	True	NA	0	True	AATAAA	-27	NA	110198653	110045845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198521
transcript_73211.known	chr4	-	610	5	FSM	ENSG00000170522.10	ENST00000506625.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	122.727340067322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCCTGCACTGGTATC	-16	True	NA	NA	False	NA	NA	NA	110199009	110051725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198841
transcript_73214.nic	chr4	-	722	3	NIC	ENSG00000170522.10	novel	204	2	NA	NA	-63	322	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGTGGAGCCACGCCA	475	False	NA	-14	True	AATAAA	-12	NA	110198716	110197568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_110197975_110198246_110198368_110198521
transcript_73220.nnic	chr4	-	1798	3	Fusion	ENSG00000250103.3_ENSG00000250511.1	novel	1447	4	NA	NA	28	723	multi-exon	FALSE	canonical	2	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAATGAATGAATAGAT	-8	True	NA	NA	False	AAAAAG	-12	NA	110615575	110511764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr4_-_110513200_110513445_110513540_110615306
transcript_73221.nnic	chr4	-	1213	3	Fusion	ENSG00000250103.3_ENSG00000250511.1	novel	1447	4	NA	NA	-172	-62	multi-exon	FALSE	canonical	2	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGTATTGGCTTACA	7331	False	NA	1	True	ATTAAA	-19	NA	110615775	110512549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr4_-_110513200_110513445_110513540_110615306
transcript_73226.known	chr4	-	448	2	FSM	ENSG00000250103.3	ENST00000513690.3	602	2	145	9	-43	-9	multi-exon	FALSE	canonical	3	64	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	7648	False	NA	-14	True	AATAAA	-19	NA	110615458	110595512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110595809_110615306
transcript_73228.known	chr4	-	2100	4	FSM	ENSG00000164093.18	ENST00000355080.9	2100	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.1434160364686	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	4827	False	NA	-9	True	AGTAAA	-17	NA	110637352	110617422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110618689_110621163_110621370_110632952_110633009_110636780
transcript_73229.known	chr4	-	2294	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-4	True	NA	-9	True	AGTAAA	-17	NA	110623077	110617422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_110618689_110621163_110621370_110622255
transcript_73230.nnic	chr4	-	1486	2	NNC	ENSG00000164093.18	novel	1608	3	NA	NA	-681	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	3599	False	NA	-9	True	AGTAAA	-17	NA	110619507	110617422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_110618689_110619287
transcript_73231.known	chr4	-	2036	1	FSM	ENSG00000260526.1	ENST00000562919.1	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACAGTAATTATTTCA	557	False	NA	NA	False	AATAAA	-23	NA	112231596	112229560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112229600_112231600
transcript_73234.nnic	chr4	+	2897	11	NNC	ENSG00000138660.12	novel	5915	10	NA	NA	-14	373	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	148.375233782461	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATAAGTTATTTGACTA	-15	True	NA	NA	False	AATAAA	-19	NA	112231772	112270050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265302_112265331_112265733_112265808_112266587_112266717_112268143
transcript_73235.known	chr4	+	5915	10	FSM	ENSG00000138660.12	ENST00000274000.10	5915	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_7	8.96632933414756	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCATCTGATTCTTGA	-1	True	NA	NA	False	AATAAA	-18	NA	112231786	112273110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_73239.known	chr4	+	2337	9	FSM	ENSG00000138660.12	ENST00000309703.10	2337	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	123.300192619476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGGCCCTTTCAATAT	8	False	NA	NA	False	TATAAA	-39	NA	112231832	112269677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_73240.known	chr4	-	4163	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTTGTTATTATTTTA	2	True	NA	0	True	NA	NA	NA	112285904	112274536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112278435_112285639
transcript_73247.known	chr4	-	3583	10	FSM	ENSG00000138658.16	ENST00000264370.9	3583	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.4544991446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATGGGTTTTGTAA	9974	False	NA	NA	False	NA	NA	NA	112636995	112605559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112606092_112607815_112607938_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636850
transcript_73248.known	chr4	-	794	6	FSM	ENSG00000138658.16	ENST00000503172.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	16.2480768092719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGAACATTGTGACTT	-11	True	NA	NA	False	AATATA	-9	NA	112636898	112619517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
transcript_73252.known	chr4	+	2020	13	FSM	ENSG00000174720.17	ENST00000509622.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	166.321705505392	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-32	True	NA	9	True	AATAAA	-17	NA	112637126	112657586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637240_112644667_112644769_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_73254.known	chr4	+	2107	13	FSM	ENSG00000174720.17	ENST00000344442.10	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	158.087792065042	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-16	True	NA	9	True	AATAAA	-17	NA	112637142	112657586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_73257.known	chr4	+	2164	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	164.019540671904	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGATTTTGTTTTT	297	False	NA	15	True	AATAAA	-23	NA	112637455	112657592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_73265.nic	chr4	+	2103	11	FSM	ENSG00000174720.17	ENST00000688617.1	2258	11	179	-24	179	0	multi-exon	FALSE	canonical	3	207	junction_7	139.304163613296	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	407	False	NA	9	True	AATAAA	-17	NA	112646053	112657586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_73275.known	chr4	+	1047	7	FSM	ENSG00000174720.17	ENST00000505034.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	185.192692440424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATGCAGAATCCCT	297	False	NA	NA	False	NA	NA	NA	112637455	112647449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198
transcript_73290.nnic	chr4	+	757	4	NNC	ENSG00000174720.17	novel	1472	3	NA	NA	202	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	170.882675800939	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-7	True	NA	9	True	AATAAA	-17	NA	112652508	112657586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_112652674_112653076_112653237_112654067_112654160_112657246
transcript_73294.known	chr4	-	345	3	FSM	ENSG00000249532.6	ENST00000509938.2	389	3	41	3	0	2	multi-exon	FALSE	canonical	3	18107	junction_2	4356	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	2	True	NA	-16	True	AATAAA	-15	NA	112648699	112646722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112646969_112647414_112647468_112648653
transcript_73295.nnic	chr4	-	399	3	NNC	ENSG00000249532.6	novel	389	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13409.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	-1	True	NA	-16	True	AATAAA	-15	NA	112648740	112646722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_112646969_112647414_112647481_112648653
transcript_73298.known	chr4	+	424	2	FSM	ENSG00000174720.17	ENST00000504079.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGCTCACGCCTGTA	34	True	NA	NA	False	ATTAAA	-19	NA	112637192	112638020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_112637240_112637643
transcript_73300.known	chr4	-	294	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	5	-3	0	multi-exon	FALSE	canonical	3	15732	junction_1	0	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTGTTTCTGTGCCAG	-2	True	NA	-18	True	AATAAA	-13	NA	112648703	112646724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112646969_112648653
transcript_73301.known	chr4	-	740	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAATATATTTTATATA	43	False	NA	-49	True	TTTAAA	-8	NA	112706810	112693046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_112693686_112706709
transcript_73304.known	chr4	-	348	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	21	False	NA	NA	False	NA	NA	NA	113214393	113214045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_113214000_113214400
transcript_73305.known	chr4	-	4603	2	FSM	ENSG00000180801.14	ENST00000315366.8	4603	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCCTGGTGGCACAT	2	True	NA	-6	True	AATAAA	-18	NA	113979647	113900283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_113903676_113978436
transcript_73309.known	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	23.1257432312996	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	24	True	NA	NA	False	AATAAA	-17	NA	114598806	114678225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_73312.nnic	chr4	+	1699	6	NNC	ENSG00000174607.11	novel	2448	5	NA	NA	224	-264	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	62.4608677493357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGCTATTATTTAG	85	False	NA	7	True	AATAAA	-18	NA	114599030	114676332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_114599058_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_73318.known	chr4	-	2023	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAACTTAGTCTTTTTT	-13	True	NA	NA	False	ATTAAA	-18	NA	117085576	117083553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_117083600_117085600
transcript_73319.known	chr4	-	4809	13	FSM	ENSG00000164099.3	ENST00000296498.3	4809	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	6.88547182277455	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCCTTAAATTTTTGT	12	True	NA	-1	True	AATAAA	-22	NA	118353003	118280037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_118282244_118282830_118283112_118294938_118295062_118295777_118295857_118298732_118298939_118308435_118308578_118313200_118313398_118316181_118316324_118318377_118318557_118331715_118331867_118335472_118335652_118338175_118338315_118352218
transcript_73324.known	chr4	+	473	4	FSM	ENSG00000269893.9	ENST00000688996.1	528	4	49	6	0	0	multi-exon	FALSE	canonical	3	82	junction_1	297.983221004136	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	-4	True	NA	13	True	AATAAA	-19	NA	118278754	118279821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118278943_118279138_118279388_118279432_118279623
transcript_73326.known	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	26	junction_1	320.479155155041	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
transcript_73327.known	chr4	+	485	4	FSM	ENSG00000269893.9	ENST00000602414.6	485	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	330.297172591929	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	-4	True	NA	15	True	AATAAA	-21	NA	118278754	118279823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118278933_118279138_118279388_118279432_118279623
transcript_73329.known	chr4	+	327	3	FSM	ENSG00000269893.9	ENST00000602520.6	335	3	4	4	1	0	multi-exon	FALSE	canonical	3	282	junction_1	264.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	NA	False	NA	15	True	AATAAA	-21	NA	118278708	118279823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278793_118279388_118279432_118279623
transcript_73330.known	chr4	+	6165	3	FSM	ENSG00000269893.9	ENST00000654083.2	6166	3	1	0	1	0	multi-exon	FALSE	canonical	3	415	junction_1	198	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATGGAGAGTAATCAAG	NA	False	NA	NA	False	AGTAAA	-38	NA	118278708	118285316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118279138_118279388_118279432_118279623
transcript_73332.known	chr4	+	815	2	FSM	ENSG00000269893.9	ENST00000652022.2	818	2	0	3	0	-1	multi-exon	FALSE	canonical	3	415	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118279138_118279388
transcript_73334.known	chr4	+	1105	1	FSM	ENSG00000269893.9	ENST00000667980.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTGTTCCTTGACTGA	-9	True	NA	14	True	AATAAA	-20	NA	118278717	118279822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118278700_118279800
transcript_73337.known	chr4	+	6642	11	FSM	ENSG00000145388.15	ENST00000388822.10	6642	11	0	0	0	0	multi-exon	FALSE	canonical	2	157	junction_3	28.6048946860498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTGCTCATAATTCAT	-1	True	NA	15	True	AATAAA	-17	NA	118685391	118715430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_73342.known	chr4	+	6625	11	FSM	ENSG00000145388.15	ENST00000628452.2	6625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.8825812524473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTCATAATTCATGAA	20	False	NA	18	True	AATAAA	-20	NA	118685412	118715433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_118685601_118687922_118688012_118689369_118689469_118691541_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_73359.nnic	chr4	+	967	8	NIC	ENSG00000145390.12	novel	5449	16	NA	NA	0	-10822	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	12.9803619332578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCGTGTTTTAATGAAT	NA	False	NA	NA	False	AATAAA	-3	NA	119212586	119260531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_119212874_119217549_119217674_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506
transcript_7336.known	chr1	-	523	5	FSM	ENSG00000163463.13	ENST00000295682.6	523	5	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_4	208.904733072279	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-22	True	NA	-10	True	AATAAA	-15	NA	155173304	155169407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173220
transcript_73360.known	chr4	+	504	4	FSM	ENSG00000145390.12	ENST00000514305.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.09901951359278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGACTTGGTTTTCCTT	28	False	NA	-76	True	AATATA	-10	NA	119212742	119220211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119220115
transcript_73362.known	chr4	+	5936	19	FSM	ENSG00000145390.12	ENST00000692078.1	6631	19	-77	772	49	38	multi-exon	FALSE	canonical	2	5	junction_3	21.3729377750417	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCTTGGCCAAATTTT	7	False	NA	27	True	TATAAA	-21	NA	119212635	119294746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119235289_119235412_119239217_119239904_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260654_119261714_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
transcript_73364.known	chr4	-	2671	2	FSM	ENSG00000164096.13	ENST00000504110.2	2671	2	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGTTGATTCTCTTTC	31	False	119300676	NA	False	AATAAA	-15	NA	119300645	119296418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_119298780_119300335
transcript_73366.nic	chr4	-	965	2	FSM	ENSG00000283050.3	ENST00000690009.1	1175	2	21	189	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAGCTTGTATACATTT	NA	False	NA	NA	False	AATAAA	-19	NA	119454626	119449566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_119450151_119454245
transcript_73367.known	chr4	-	939	2	FSM	ENSG00000283050.3	ENST00000635323.2	1137	2	2	196	2	-3	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAAGCTTGTATACA	NA	False	NA	NA	False	AATAAA	-16	NA	119454628	119449569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_119450126_119454245
transcript_73368.known	chr4	-	6959	21	FSM	ENSG00000138735.16	ENST00000354960.8	6959	21	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_15	12.1453694879983	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGAATACTGTGTGATT	-1	True	NA	-6	True	AATAAA	-16	NA	119628804	119494402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_119498739_119501169_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_73369.nic	chr4	-	2976	20	ISM	ENSG00000138735.16	ENST00000354960.8	6959	21	-6	6420	-6	0	5prime_fragment	FALSE	canonical	3	69	junction_14	12.4606860991256	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTCATTGTCATAAT	-7	True	NA	-5	True	AATAAA	-15	NA	119628810	119500822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_73385.nic	chr4	+	1452	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	-24	10	-1	0	multi-exon	TRUE	canonical	3	82	junction_7	32.714436797842	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	NA	False	NA	57	True	AATAAA	-22	NA	119454760	119499974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_73390.known	chr4	-	5227	5	FSM	ENSG00000164109.14	ENST00000296509.11	5227	5	0	0	0	0	multi-exon	FALSE	canonical	3	1198	junction_1	78.7031606735079	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGAAATGGAAACTGTC	-26	True	NA	-12	True	GATAAA	-17	NA	120066848	120055622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120060291_120060873_120060978_120061974_120062096_120065671_120065819_120066661
transcript_73393.known	chr4	-	1277	4	FSM	ENSG00000164109.14	ENST00000333047.9	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	593.265164623337	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTCTTAAAACATTT	-11	True	NA	-20	True	AATAAA	-15	NA	120066833	120059436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120060291_120060873_120060978_120065671_120065819_120066661
transcript_73395.known	chr4	-	764	3	FSM	ENSG00000164109.14	ENST00000504707.1	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	594.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTGCTATAAAGCTAG	-36	True	NA	NA	False	NA	NA	NA	120066858	120059827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120060291_120060873_120060978_120066661
transcript_73396.known	chr4	-	5207	16	FSM	ENSG00000138738.11	ENST00000264808.8	5207	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	15.3674981698388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTGTTAGCATTTTA	-7	True	NA	-1	True	AATAAA	-20	NA	120922726	120691914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_73397.known	chr4	-	2338	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	12.1573442991536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-9	True	NA	-49	True	TATAAA	-36	NA	120922858	120694822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_73399.known	chr4	-	2492	4	FSM	ENSG00000138738.11	ENST00000394435.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.9608770051883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	120922870	120837344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_120839275_120853417_120853541_120907473_120907558_120922515
transcript_73405.nnic	chr4	-	501	3	NNC	ENSG00000138738.11	novel	5207	16	NA	NA	-17	4298	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTGATTTGTGTTT	-24	True	NA	NA	False	AATAAA	-30	NA	120922743	120881206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_120881396_120907473_120907558_120922515
transcript_73406.nnic	chr4	-	1570	3	NNC	ENSG00000251609.2	novel	805	3	NA	NA	-25775	990	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	37.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTTTATCACTAGCT	-9	True	NA	NA	False	AATAAA	-23	NA	120922858	120894503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_120895647_120907473_120907558_120922515
transcript_73407.nnic	chr4	-	1356	3	NNC	ENSG00000251609.2	novel	805	3	NA	NA	-25674	877	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	37.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGATACTGTTTTCCTC	92	False	NA	NA	False	AATAAA	-20	NA	120922757	120894616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_120895647_120907473_120907558_120922515
transcript_73408.known	chr4	-	2902	4	FSM	ENSG00000173376.14	ENST00000379692.9	2902	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.09901951359278	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTGGTGTATTCAAT	-4	True	NA	5	True	ATTAAA	-36	NA	121072535	121035612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121037658_121039929_121040055_121045649_121045839_121071992
transcript_73409.known	chr4	-	2339	6	FSM	ENSG00000186867.11	ENST00000394427.3	2339	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	3.26190128606002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTGCTAGATTGAAT	-4	True	NA	NA	False	NA	NA	NA	121381018	121328641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121329715_121330425_121330524_121332820_121333057_121336806_121336869_121340451_121340611_121380307
transcript_73411.known	chr4	-	1215	6	FSM	ENSG00000186867.11	ENST00000334383.9	1215	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.01996015920445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAACAATATCTTCATAA	362	False	NA	NA	False	NA	NA	NA	121380679	121329313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121329715_121330425_121330524_121332933_121333057_121336806_121336869_121340451_121340611_121380307
transcript_73418.known	chr4	-	1638	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	2152	junction_4	199.186871360093	2058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTTTTAAGCTAATAA	-7	True	NA	43	True	ATTAAA	-17	NA	121696980	121667945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_7342.known	chr1	-	578	4	FSM	ENSG00000163463.13	ENST00000471891.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_3	229.858410524586	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	31	True	NA	-11	True	AATAAA	-14	NA	155173251	155169408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172893_155173220
transcript_73434.known	chr4	+	1529	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_10	188.49320279522	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	-37	True	NA	16	True	ATTAAA	-17	NA	121801319	121816909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
transcript_73439.known	chr4	+	1587	12	FSM	ENSG00000123737.13	ENST00000243498.10	1587	12	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_10	84.5920692607657	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	-34	True	NA	16	True	AATAAA	-13	NA	121801322	121817021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816368_121816448_121816771
transcript_73450.nic	chr4	+	934	8	ISM	ENSG00000123737.13	ENST00000509980.5	1317	11	-11	3743	-11	0	5prime_fragment	FALSE	canonical	3	567	junction_4	56.9001990599438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGTAAGGTAAGTAAC	NA	False	NA	NA	False	NA	NA	NA	121801306	121811660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582
transcript_73451.known	chr4	-	2748	8	FSM	ENSG00000145386.11	ENST00000274026.10	2748	8	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_3	44.6665651334007	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGATTCTTGTCT	7	True	NA	-10	True	AATAAA	-20	NA	121823883	121816443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121817687_121818043_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
transcript_73459.known	chr4	-	3840	19	FSM	ENSG00000138686.10	ENST00000264499.9	3840	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	78.7098320054171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACACATAAGAAAACGGAG	-9	True	NA	NA	False	NA	NA	NA	121870474	121824328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_73462.known	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	79.431718625971	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	15	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_7347.known	chr1	-	414	3	FSM	ENSG00000163463.13	ENST00000482246.5	414	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	588.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	14	True	NA	-11	True	AATAAA	-14	NA	155173268	155169408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169620_155172737_155172893_155173220
transcript_73472.known	chr4	-	725	4	FSM	ENSG00000138686.10	ENST00000502444.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	22.6028513442196	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGACAACTTGGTTC	-22	True	NA	NA	False	TTTAAA	-24	NA	121870487	121861293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_121861680_121863216_121863280_121867980_121868047_121870277
transcript_73475.known	chr4	+	3238	2	FSM	ENSG00000181004.10	ENST00000314218.8	3238	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGATATGTGGTGTTA	20	True	NA	3	True	AATAAA	-16	NA	122732703	122744939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_122732885_122741882
transcript_73478.known	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.204117097743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-16	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
transcript_73479.known	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	25.3968501984006	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-14	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
transcript_7348.known	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_3	13.6950923894494	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5699	False	NA	-10	True	AATAAA	-15	NA	155173238	155169407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
transcript_73480.known	chr4	+	6652	3	FSM	ENSG00000138685.17	ENST00000644866.2	6652	3	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_1	6	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGTGTCTTCTTGTC	-1	True	NA	30	True	AATAAA	-31	NA	122826830	122898236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_122827353_122876320_122876425_122892210
transcript_73483.nic	chr4	-	588	3	ISM	ENSG00000170917.14	ENST00000304430.10	1227	5	-42	19968	-42	-15019	5prime_fragment	FALSE	canonical	0	0	junction_2	53.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	315	False	NA	NA	False	AATAAA	-24	NA	122922639	122912544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_122912624_122917500_122917705_122922334
transcript_73484.nic	chr4	-	506	3	ISM	ENSG00000170917.14	ENST00000339154.6	1065	5	-55	19901	-55	-15019	5prime_fragment	FALSE	canonical	3	53	junction_2	27	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	NA	False	NA	NA	False	AATAAA	-24	NA	122923023	122912544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_122912624_122917500_122917705_122922800
transcript_73485.known	chr4	+	2492	15	FSM	ENSG00000145375.9	ENST00000422835.2	2492	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_14	11.4920114223147	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	4	True	NA	NA	False	NA	NA	NA	122923100	123102293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123102183
transcript_7349.known	chr1	-	598	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	692.344567394011	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5462	False	NA	-10	True	AATAAA	-15	NA	155173475	155169407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
transcript_73491.known	chr4	+	849	2	FSM	ENSG00000164056.11	ENST00000515726.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCCTGGCCGGTGGCG	2	True	NA	NA	False	NA	NA	NA	123396810	123398337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123396933_123397610
transcript_73492.known	chr4	+	2352	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	506	False	NA	NA	False	AATATA	-19	NA	123398385	123403760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123398514_123401536
transcript_73493.known	chr4	+	2504	2	FSM	ENSG00000164056.11	ENST00000394339.2	2504	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTCGATTTCTTCAT	1035	False	NA	NA	False	AATATA	-14	NA	123399509	123403755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123399795_123401536
transcript_73494.known	chr4	+	2348	2	FSM	ENSG00000164056.11	ENST00000339241.1	2348	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTCTCGATTTCTT	-8	True	NA	NA	False	AATATA	-11	NA	123396800	123403752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123396933_123401536
transcript_73495.known	chr4	+	1137	4	FSM	ENSG00000249464.7	ENST00000662928.1	1137	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTCTTATATTTTCTC	9706	False	NA	NA	False	AGTAAA	-21	NA	123553518	123664947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_123554064_123652786_123652903_123661752_123661834_123664552
transcript_73496.known	chr4	-	8798	5	FSM	ENSG00000151458.12	ENST00000504087.6	8798	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	8.97217922246318	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCACTTCTTCATGA	-1	True	NA	NA	False	AATAAA	-27	NA	124712732	124664047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_124667515_124668983_124672535_124678675_124678906_124709999_124711275_124712457
transcript_7350.known	chr1	-	1107	7	FSM	ENSG00000185499.17	ENST00000338684.9	1107	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	3.80423740350444	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGATCTTTCATCTG	-6	True	NA	-6	True	AATAAA	-21	NA	155192915	155185825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155192182_155192311_155192785
transcript_73500.known	chr4	-	1295	4	FSM	ENSG00000248491.6	ENST00000513519.2	1295	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATTGTCAGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	127106771	127094409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127094477_127095103_127095267_127096331_127097260_127106634
transcript_73502.known	chr4	+	13208	16	FSM	ENSG00000164066.13	ENST00000335251.11	13208	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.37988391304616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCCTTTTTCATG	10	True	NA	14	True	AATAAA	-24	NA	127632956	127726737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
transcript_73504.nic	chr4	+	418	2	ISM	ENSG00000164066.13	ENST00000503952.5	3006	17	-32	72788	-23	-345	5prime_fragment	FALSE	canonical	3	27	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAACCCAAACTCAAGC	-13	True	NA	-27	True	AAGAAA	-8	NA	127632933	127643691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_127633181_127643520
transcript_73505.known	chr4	+	10608	19	FSM	ENSG00000164070.12	ENST00000296464.9	10608	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	2.96741563579414	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACACCTGAGGTTTA	16	True	NA	NA	False	AATAAA	-29	NA	127782321	127840733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427_127820566_127822768_127822895_127823516_127823625_127827304_127827425_127830637_127830800_127832682
transcript_73509.nic	chr4	+	3582	16	NIC	ENSG00000142731.11	novel	3838	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	43.9703940800575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACATTATCTTTTGATTC	-22	True	NA	-1	True	AATAAA	-12	NA	127880889	127899067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886627_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_7351.known	chr1	-	3145	23	FSM	ENSG00000169231.13	ENST00000368378.7	3145	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.557438524302	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	20	True	NA	-3	True	CATAAA	-19	NA	155207897	155195587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155204854_155204958_155205059_155205317_155206199_155206407_155207797
transcript_73510.known	chr4	+	3838	16	FSM	ENSG00000142731.11	ENST00000270861.10	3838	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	28.0803608713753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTATATTTTAATGAA	-19	True	NA	NA	False	AATACA	-23	NA	127880892	127899224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886729_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_73517.nic	chr4	+	1808	5	ISM	ENSG00000142731.11	ENST00000507249.5	3195	16	-39	11867	-3	3417	5prime_fragment	FALSE	canonical	3	166	junction_1	12.5797456254091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGCCTCATTTTTTAA	-22	True	NA	NA	False	TATAAA	-20	NA	127880889	127886933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707
transcript_7352.known	chr1	-	3200	22	FSM	ENSG00000169231.13	ENST00000541576.5	3200	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	9.72921355361686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGTGCAACTGCTTAT	1195	False	NA	-5	True	CATAAA	-17	NA	155207981	155195589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155204854_155204958_155205059_155205317_155206199_155206407_155207797
transcript_73521.known	chr4	+	5753	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	20.9138444311152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCTCAATGTTGCTC	-2	True	NA	NA	False	AATAAA	-16	NA	127965405	128039953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
transcript_73528.known	chr4	-	4374	12	FSM	ENSG00000164073.11	ENST00000641178.1	4374	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	31.0374340764437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAGACTTATTTGTAA	NA	False	NA	-103	True	AATAGA	-42	NA	127966034	127917888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965896
transcript_73531.known	chr4	+	1493	11	FSM	ENSG00000164074.16	ENST00000611882.1	1493	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	27.1447969231674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCACAGAGTTACTTTT	41	False	NA	NA	False	NA	NA	NA	127965505	128030805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509
transcript_73538.nnic	chr4	+	1777	7	NNC	ENSG00000164074.16	novel	2177	11	NA	NA	-28	1580	at_least_one_novel_splicesite	FALSE	non_canonical	2	13	junction_6	22.698507048311	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGAAATAGGAT	-13	True	NA	NA	False	AAAAAG	-27	NA	127965277	128010537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128009548
transcript_73540.nnic	chr4	+	2223	7	NNC	ENSG00000164074.16	novel	2177	11	NA	NA	-10	2115	at_least_one_novel_splicesite	FALSE	non_canonical	2	13	junction_6	22.698507048311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGAGTGTACAACCCTG	-5	True	NA	NA	False	AATAAA	-26	NA	127965366	128011072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128009548
transcript_73541.nic	chr4	+	2134	6	ISM	ENSG00000164074.16	ENST00000398965.5	2177	11	-28	20753	-28	1580	5prime_fragment	FALSE	canonical	3	58	junction_4	8.97552226892675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGAAATAGGAT	-13	True	NA	NA	False	AAAAAG	-27	NA	127965277	128010537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106
transcript_73546.known	chr4	-	4422	12	FSM	ENSG00000164073.11	ENST00000641686.2	4422	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	23.9234315789436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAGCTTTAAAACTTTA	-14	True	NA	-19	True	AATAAA	-22	NA	127965173	127917804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_73547.known	chr4	-	1422	7	FSM	ENSG00000164073.11	ENST00000641243.1	1422	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	32.390413533774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTTGACAACTTGGT	-12	True	NA	NA	False	ATTAAA	-21	NA	127965171	127932318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_73548.known	chr4	-	886	4	FSM	ENSG00000164073.11	ENST00000641140.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	13.0979218029257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAAATAGATCC	1	True	NA	NA	False	NA	NA	NA	127965219	127943390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_127943993_127949803_127949848_127957500_127957593_127965071
transcript_73550.known	chr4	+	3105	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_11	45.098789633939	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	-19	True	NA	-21	True	ATTAAA	-22	NA	128061285	128123869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
transcript_73556.nic	chr4	+	1917	11	ISM	ENSG00000138709.19	ENST00000512292.5	3105	12	-36	1517	-36	0	5prime_fragment	FALSE	canonical	3	55	junction_10	38.4426846096887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATCGTTTTATTTTATG	398	False	NA	7	True	AATATA	-19	NA	128061249	128122352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825
transcript_73564.known	chr4	+	2151	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	19.9115327336313	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	30	False	NA	12	True	AATAAA	-19	NA	128061334	128108901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_73568.known	chr4	+	2707	9	FSM	ENSG00000138709.19	ENST00000432347.6	2707	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	20.6700266085944	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	1	True	NA	12	True	AATAAA	-19	NA	128061347	128108901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
transcript_73570.nic	chr4	+	2095	9	NIC	ENSG00000138709.19	novel	2151	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	50.5049502524258	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	398	False	NA	12	True	AATAAA	-19	NA	128061249	128108901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_73576.nic	chr4	+	325	4	ISM	ENSG00000138709.19	ENST00000394288.7	2151	10	-85	31060	-36	-31013	5prime_fragment	FALSE	canonical	3	102	junction_1	26.4112770527204	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGGTTGAAAAGAG	398	False	NA	NA	False	AATAAA	-25	NA	128061249	128077841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787
transcript_73577.known	chr4	-	3785	3	FSM	ENSG00000164040.18	ENST00000520121.6	3785	3	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_2	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTGAATGTTTCTCA	-18	True	NA	-5	True	AATAAA	-26	NA	128288829	128269241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_128271414_128272361_128272518_128287372
transcript_73580.nnic	chr4	-	1614	2	NNC	ENSG00000164040.18	novel	2858	2	NA	NA	-5347	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCAACTTCAGTTGAAT	9780	False	NA	-13	True	AATAAA	-18	NA	128278408	128269249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_128270850_128278394
transcript_73581.nnic	chr4	-	724	2	NNC	ENSG00000164040.18	novel	2858	2	NA	NA	-5347	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTGAGTTGGACTTTA	9780	False	NA	-23	True	AATAAA	-21	NA	128278408	128270139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_128270850_128278394
transcript_73583.known	chr4	-	2987	21	FSM	ENSG00000151466.12	ENST00000281142.10	2987	21	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	10.2248471871222	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGTCATGTATTTTA	929	False	129093561	-13	True	AATAAA	-18	NA	129093539	128883992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_128884540_128888678_128888775_128891058_128891138_128936654_128936852_128942995_128943189_128946006_128946153_128948495_128948571_128952768_128952841_128957025_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_73590.nic	chr4	-	1585	13	ISM	ENSG00000151466.12	ENST00000281142.10	2987	21	-78	73108	-17	-72711	5prime_fragment	FALSE	canonical	3	48	junction_2	11.0441035046862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGACATAGAGAAAAT	-19	True	NA	NA	False	NA	NA	NA	129093617	128957100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_73591.known	chr4	-	2096	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	23.2980685894775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTAGTTTTTCTCATTT	1091	False	NA	NA	False	AATAAA	-18	NA	129093377	129036594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_73594.known	chr4	-	1696	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.6646751576104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCAGAATCTGATTG	923	False	129093561	NA	False	AATAAA	-25	NA	129093545	129039192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_73595.nnic	chr4	-	1372	4	NNC	ENSG00000151466.12	novel	3311	23	NA	NA	-1	-33278	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.5269119345812	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAGAAAATATGAACAA	928	False	129093561	NA	False	NA	NA	NA	129093540	129072507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_129073278_129076594_129076658_129082305_129082374_129093069
transcript_73597.nnic	chr4	-	1308	3	NNC	ENSG00000151466.12	novel	3311	23	NA	NA	0	-33278	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAGAAAATATGAACAA	929	False	129093561	NA	False	NA	NA	NA	129093539	129072507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_129073278_129082305_129082374_129093069
transcript_73599.known	chr4	+	3000	11	FSM	ENSG00000077684.16	ENST00000512960.5	3000	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	213.918582643023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCAGAAACCCATTAAT	13	False	NA	NA	False	NA	NA	NA	128809918	128872334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128810292_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_7360.known	chr1	+	1085	8	FSM	ENSG00000173171.15	ENST00000609421.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	48.6964776834579	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTCAAACATTTTCTCC	5	True	NA	NA	False	AATAAA	-16	NA	155209246	155213824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212126_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_73600.known	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	157.677645847469	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	-12	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_73603.known	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	242.895939653177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	6	True	NA	8	True	AATAAA	-19	NA	128811325	128864630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_73608.known	chr4	+	564	5	FSM	ENSG00000077684.16	ENST00000510308.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	232.551607175698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACATGGATGCTGCATG	6	True	NA	NA	False	NA	NA	NA	128811287	128849112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979
transcript_73609.known	chr4	+	6170	6	FSM	ENSG00000151470.13	ENST00000281146.9	6170	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15.957443404255	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATTAGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	129093316	129116640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_73610.known	chr4	+	5513	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	4.53431361950185	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTTGAATTAGTT	11	True	NA	NA	False	AATAAA	-19	NA	129096151	129116637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_73613.nnic	chr4	+	1845	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCTTGTTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	132123785	132128808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_132124000_132127177
transcript_73615.nnic	chr4	+	3255	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTGCAATTTTTTATTC	NA	False	NA	1	True	AATAAA	-16	NA	132123785	132130218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_+_132124000_132127177
transcript_73623.nnic	chr4	-	1978	10	NNC	ENSG00000250241.7	novel	1205	8	NA	NA	2	428	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.75312995165828	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAACTAAATTTTGC	-2	True	NA	NA	False	AAAAAG	-10	NA	133149145	133109839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_133110911_133115495_133115647_133116368_133116512_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_73624.known	chr4	-	3339	9	FSM	ENSG00000250241.7	ENST00000671428.1	3339	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	7.54569413639329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATACACACTAATATGT	1852	False	NA	NA	False	NA	NA	NA	133149124	133093348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140657_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_73629.known	chr4	-	1205	8	FSM	ENSG00000250241.7	ENST00000659189.1	1205	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.07106781186548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGACAAAGAGGCCAAAAC	1882	False	NA	NA	False	NA	NA	NA	133149094	133110267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_133110911_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_73630.nnic	chr4	+	1174	5	NNC	ENSG00000138650.9	novel	8510	5	NA	NA	-1	-3934	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.1573396113771	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATAATTTTCCTAAA	0	True	NA	11	True	AATAAA	-19	NA	133149292	133190766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_133149369_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_73635.known	chr4	-	1460	2	FSM	ENSG00000286467.1	ENST00000669848.1	1460	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATGATCTTTGTGTAA	0	True	NA	NA	False	TATAAA	-12	NA	133263115	133261021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_133261995_133262628
transcript_73640.known	chr4	-	4985	2	FSM	ENSG00000254535.4	ENST00000421491.4	4985	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTGAAAATGATTTT	-3	True	NA	NA	False	AATAAA	-23	NA	134201789	134196332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_134201246_134201717
transcript_73641.known	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	31.6262900483478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	26	True	NA	-17	True	AATAAA	-18	NA	137532459	137519702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
transcript_73642.known	chr4	-	1331	4	FSM	ENSG00000189184.12	ENST00000511115.5	1331	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	115.977009215907	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACATTTGTACCTTA	9	True	NA	30	True	NA	NA	NA	137532476	137520837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137532254
transcript_73644.known	chr4	-	5925	4	FSM	ENSG00000189184.12	ENST00000344876.9	5925	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	96.6517229828602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTATATTGTCCATAT	-9	True	NA	3	True	AATAAA	-30	NA	137532494	137518917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_137521697_137528477_137528642_137528731_137528821_137529601
transcript_73645.known	chr4	-	9645	12	FSM	ENSG00000151012.13	ENST00000280612.9	9645	12	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	5.51182050589968	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCGTCATGTTTTGC	-3	True	NA	NA	False	AATAAA	-20	NA	138242349	138164096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_138172018_138179216_138179395_138180640_138180791_138182296_138182394_138183201_138183306_138185120_138185245_138214584_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
transcript_73651.known	chr4	-	1965	7	FSM	ENSG00000109381.21	ENST00000510408.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	47.8553956089477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACTACGATATCAAG	6	True	NA	NA	False	AAAAAG	-18	NA	139084325	139058718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139084132
transcript_73652.known	chr4	-	3036	7	FSM	ENSG00000109381.21	ENST00000358635.7	3036	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	49.2803769826851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTCTGGTGATATT	NA	False	NA	2	True	AATATA	-21	NA	139084496	139057854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139084132
transcript_73655.known	chr4	-	4012	10	FSM	ENSG00000109381.21	ENST00000394235.6	4012	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	37.2024823279042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAAATTCTGTCTCCTTT	-7	True	NA	47	True	AAGAAA	-35	NA	139177218	139057219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
transcript_73656.known	chr4	-	2219	4	FSM	ENSG00000109381.21	ENST00000514606.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	27.7968823191858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACATTGAACACATTCA	-7	True	NA	NA	False	AAGAAA	-44	NA	139084338	139066009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139067771_139071865_139072004_139073453_139073568_139084132
transcript_73659.nic	chr4	-	516	3	ISM	ENSG00000109381.21	ENST00000514606.1	2219	4	-73	5871	-73	-5871	5prime_fragment	FALSE	canonical	3	63	junction_2	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAGAAAAAAGGTAGA	NA	False	NA	NA	False	NA	NA	NA	139084411	139071880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_139072004_139073453_139073568_139084132
transcript_7366.known	chr1	+	1441	7	FSM	ENSG00000173171.15	ENST00000316721.8	1441	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	277.143614996509	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	28	True	NA	NA	False	AATAAA	-15	NA	155208796	155213823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_73660.known	chr4	+	6072	20	FSM	ENSG00000164134.13	ENST00000398947.1	6072	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_17	79.7179237588452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTGGAAAAGATTAC	73	False	NA	-7	True	AATAAA	-1	NA	139301587	139391368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384834_139384979_139386132_139386231_139387883
transcript_73663.nic	chr4	+	2197	15	ISM	ENSG00000164134.13	ENST00000296543.10	6174	20	-97	21100	-97	-9051	5prime_fragment	FALSE	canonical	3	335	junction_4	29.2212705586397	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGAAAAAAAATGCAGA	NA	False	NA	9	True	AATAAA	-34	NA	139301407	139370284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210
transcript_73665.known	chr4	-	761	6	FSM	ENSG00000109390.13	ENST00000394228.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	1537.03681153055	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	NA	False	NA	2	True	AATAAA	-40	NA	139302551	139289916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139296331_139296368_139302415
transcript_73666.known	chr4	-	1257	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	1536.54724626352	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	1312	False	NA	2	True	AATAAA	-40	NA	139301210	139289916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
transcript_73667.known	chr4	-	1198	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1338.35206504118	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	1312	False	NA	2	True	AATAAA	-40	NA	139301210	139289916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
transcript_73668.known	chr4	-	664	5	FSM	ENSG00000109390.13	ENST00000394225.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	1292.0734063899	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-4	True	NA	-34	True	AATAAA	-14	NA	139302526	139289952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
transcript_7367.known	chr1	+	2579	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_5	38.9001570976548	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	9	True	NA	NA	False	AATAAA	-15	NA	155209250	155213823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_73671.known	chr4	-	1224	4	FSM	ENSG00000137463.5	ENST00000398955.2	1224	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	4.96655480858378	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTCTACTTTTTTC	-15	True	NA	NA	False	AATAAA	-13	NA	139280225	139266164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139280076
transcript_73676.known	chr4	-	627	3	FSM	ENSG00000273247.6	ENST00000609359.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATGGTACTGGCATTA	-1	True	NA	NA	False	NA	NA	NA	139454034	139413823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139414025_139415936_139416013_139453684
transcript_73678.known	chr4	-	1602	8	FSM	ENSG00000145391.14	ENST00000506866.6	1602	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.25599640167146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAACCCAGGTTATTAG	1161	False	139556252	NA	False	AATAAA	-15	NA	139556238	139495940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139496522_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_73680.known	chr4	-	1590	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGTTGGAAATTAATG	630	False	NA	NA	False	ATTAAA	-20	NA	139556769	139532578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_139533367_139546919_139547050_139556097
transcript_73687.nic	chr4	+	648	4	ISM	ENSG00000085871.9	ENST00000515137.5	1013	5	-122	36502	-8	0	5prime_fragment	FALSE	canonical	3	20	junction_1	376.60943518009	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGAAATGGCTTTGTA	-9	True	NA	21	True	AATAAA	-21	NA	139665810	139704243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_139666078_139695196_139695268_139703454_139703537_139704015
transcript_73688.known	chr4	+	634	4	FSM	ENSG00000085871.9	ENST00000506797.5	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	343.636435786428	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTTTATTCTGTTT	15	False	NA	2	True	AATAAA	-2	NA	139665834	139704224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_139666078_139678542_139678643_139703454_139703537_139704015
transcript_73689.known	chr4	+	740	5	FSM	ENSG00000085871.9	ENST00000265498.6	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	39.7020150622106	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGAAATGGCTTTGTA	-1	True	NA	21	True	AATAAA	-21	NA	139665818	139704243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_139666078_139678542_139678643_139695196_139695268_139703454_139703537_139704015
transcript_73693.known	chr4	+	1999	4	FSM	ENSG00000153130.18	ENST00000394203.7	1999	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	278.834478977523	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTTGATATAGTTG	85	False	NA	36	True	AATAAA	-19	NA	140343460	140382556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140343709_140379120_140379193_140379568_140379653_140380961
transcript_73694.known	chr4	+	4995	4	FSM	ENSG00000153130.18	ENST00000608372.6	4995	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_3	14.522013940528	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGGTGATTGTCAT	4	True	NA	NA	False	AATAAA	-20	NA	140373645	140385728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140373718_140379120_140379193_140379568_140379653_140380961
transcript_73697.known	chr4	+	1838	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	300	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	NA	False	NA	25	True	AATAAA	-8	NA	140373535	140382545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140373718_140379120_140379193_140380961
transcript_73699.known	chr4	+	1864	5	FSM	ENSG00000153130.18	ENST00000338517.8	1864	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	308.127003036086	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTTTTGATATAGT	67	False	NA	34	True	AATAAA	-17	NA	140343442	140382554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140343470_140343620_140343709_140379120_140379193_140379568_140379653_140380961
transcript_73700.known	chr4	-	453	3	FSM	ENSG00000196951.12	ENST00000608178.6	478	3	25	0	3	0	multi-exon	FALSE	canonical	3	51	junction_1	7.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCCGTACTTTCTCTG	12	True	NA	NA	False	AATAAA	-14	NA	140373381	140360681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_140360975_140369309_140369351_140373262
transcript_73702.known	chr4	-	2725	15	FSM	ENSG00000153132.13	ENST00000325617.10	2725	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	5.07746120072797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTATTTGACAGGTTAT	2	True	NA	2	True	AATAAA	-25	NA	140427648	140388452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_140389305_140390627_140390729_140392218_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_73705.nic	chr4	-	1781	13	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-38	3795	-25	-3793	5prime_fragment	FALSE	canonical	3	36	junction_3	5.40768486096921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATGATGGTGAAATGC	166	False	NA	NA	False	NA	NA	NA	140427686	140392247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_73706.nic	chr4	-	1722	13	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-38	3854	-25	-3852	5prime_fragment	FALSE	canonical	3	36	junction_3	5.40768486096921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGGAAGAGAAAGC	166	False	NA	NA	False	NA	NA	NA	140427686	140392306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_73707.nic	chr4	-	1639	12	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-38	4144	-25	-4142	5prime_fragment	FALSE	canonical	3	36	junction_2	5.31332334407362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGTAAAGGTAAAGAAA	166	False	NA	NA	False	NA	NA	NA	140427686	140392596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_73708.known	chr4	+	4399	9	FSM	ENSG00000179387.10	ENST00000323570.8	4399	9	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	16.6038399173203	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	0	True	NA	15	True	AATAAA	-18	NA	140524167	140553770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140524281_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
transcript_73712.known	chr4	+	751	3	FSM	ENSG00000179387.10	ENST00000511887.6	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTTTCTTGCTCATA	0	True	NA	NA	False	AATAAA	-21	NA	140524167	140527952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_140524281_140525419_140525571_140527465
transcript_73714.known	chr4	-	1621	6	FSM	ENSG00000109424.4	ENST00000262999.4	1621	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	0.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTTGAGATCTAT	-1	True	NA	NA	False	AATAAA	-22	NA	140568961	140559430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_140560011_140562192_140562374_140563109_140563212_140563317_140563519_140567778_140567978_140568603
transcript_73722.nic	chr4	+	1599	10	NIC	ENSG00000109445.11	novel	1891	10	NA	NA	-6	-214	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	77.4711415804477	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATGATAAGTATGTT	346	False	NA	8	True	ATTAAA	-18	NA	141220880	141234483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_141221017_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_73725.nic	chr4	+	1654	10	NIC	ENSG00000109445.11	novel	1891	10	NA	NA	0	-214	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	80.0694143297621	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATGATAAGTATGTT	-42	True	NA	8	True	ATTAAA	-18	NA	141220886	141234483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_141221078_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_73733.known	chr4	+	1891	10	FSM	ENSG00000109445.11	ENST00000262990.9	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	31.1214268611923	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGACATTATATTTA	-34	True	NA	NA	False	AATAAA	-19	NA	141220894	141234697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_141221109_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_73737.known	chr4	-	759	2	FSM	ENSG00000250326.2	ENST00000507486.1	759	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCACCCAAGACTATAAG	NA	False	NA	NA	False	NA	NA	NA	143184829	143177659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_143178097_143184507
transcript_73739.known	chr4	+	7981	11	FSM	ENSG00000109458.9	ENST00000262995.8	7981	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	11.0018180315801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGAACCTCATTCAA	184	False	NA	NA	False	AGTAAA	-19	NA	143336761	143474568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_143337261_143415476_143415772_143433490_143433717_143437998_143438601_143439801_143439888_143440078_143440383_143457679_143457770_143459384_143459479_143460363_143460488_143466102_143466226_143469030
transcript_7374.known	chr1	-	768	2	FSM	ENSG00000169231.13	ENST00000498500.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	5661	False	NA	-3	True	CATAAA	-19	NA	155196442	155195587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155195900_155195986
transcript_73740.known	chr4	+	2648	10	FSM	ENSG00000109458.9	ENST00000262994.9	7774	10	11	5115	11	43	multi-exon	FALSE	canonical	3	20	junction_3	6.62393713812839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTACTGTATTTATGC	3	True	NA	NA	False	NA	NA	NA	143336886	143469450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_143337261_143415476_143415772_143433490_143433717_143437998_143438601_143439801_143439888_143440078_143440383_143459384_143459479_143460363_143460488_143466102_143466226_143469030
transcript_73741.known	chr4	+	7684	24	FSM	ENSG00000153147.6	ENST00000283131.4	7684	24	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_9	145.577242243962	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCATGTGATTATTT	-19	True	NA	5	True	ATTAAA	-16	NA	143513701	143557486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996_143550105_143553118
transcript_73742.known	chr4	-	564	5	FSM	ENSG00000250361.9	ENST00000502664.6	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	3.278719262151	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTATTATAGTCATGA	-1	True	NA	NA	False	AATAAA	-24	NA	144019380	143996103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_143996305_143997539_143997635_143999410_143999450_144001184_144001284_144019250
transcript_73743.known	chr4	+	1770	4	FSM	ENSG00000164161.10	ENST00000434550.2	1770	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	3.74165738677394	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCTTGTACAATGTTT	-3	True	NA	NA	False	CATAAA	-19	NA	144646171	144660273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636
transcript_73746.known	chr4	-	689	7	FSM	ENSG00000164162.14	ENST00000513054.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	107.649766475465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACCAGTAGAAGAGAGC	390	False	NA	NA	False	ATTAAA	-5	NA	145098180	144995455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097494_145097563_145097687_145097761_145098119
transcript_73747.known	chr4	-	963	7	FSM	ENSG00000164162.14	ENST00000510270.5	963	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	108.048471632977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTTGAAGCCAATC	15	True	NA	NA	False	AATAAA	-24	NA	145098189	144995160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_7375.nic	chr1	-	2543	13	NIC	ENSG00000177628.16	novel	2387	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	36.1347785688832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-1	True	NA	NA	False	NA	NA	NA	155244690	155234451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244094_155244231_155244505
transcript_73750.known	chr4	-	928	6	FSM	ENSG00000164162.14	ENST00000451299.6	928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	107.745255115945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	15	True	NA	NA	False	AATAAA	-27	NA	145098189	144995157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_73753.nnic	chr4	-	1248	6	NNC	ENSG00000164162.14	novel	928	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	107.726319903726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	318	False	NA	NA	False	AATAAA	-27	NA	145098252	144995157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_144995604_145033041_145033372_145064571_145064693_145081659_145081751_145095984_145096112_145098119
transcript_73756.nic	chr4	-	953	6	NIC	ENSG00000164162.14	novel	963	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	104.660594303682	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTTGAAGCCAATC	318	False	NA	NA	False	AATAAA	-24	NA	145098252	144995160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145098119
transcript_73758.known	chr4	-	1444	5	FSM	ENSG00000164162.14	ENST00000507656.6	1444	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	35.202095108104	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGAAATGTGGTTTTT	8	True	NA	NA	False	ATTAAA	-15	NA	145098196	144994575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098119
transcript_73759.known	chr4	-	868	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	79.8342031963744	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-9	True	NA	NA	False	AATAAA	-27	NA	145098213	144995157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
transcript_7376.known	chr1	-	2387	12	FSM	ENSG00000177628.16	ENST00000327247.9	2387	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	27.4262346505574	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-8	True	NA	NA	False	NA	NA	NA	155244670	155234451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244505
transcript_73766.nic	chr4	-	1265	5	ISM	ENSG00000164162.14	ENST00000451299.6	928	6	22	0	0	0	intron_retention	FALSE	canonical	0	0	junction_4	99.1438349066648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-6	True	NA	NA	False	AATAAA	-27	NA	145098167	144995157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097687
transcript_73771.nic	chr4	-	759	4	NIC	ENSG00000164162.14	novel	687	4	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	95.6184547505809	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	318	False	NA	NA	False	AATAAA	-31	NA	145098252	144995195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_144995604_145081659_145081751_145095984_145096112_145098119
transcript_73772.known	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	106.615612782035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	13	True	NA	NA	False	AATAAA	-31	NA	145098191	144995195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
transcript_73774.known	chr4	+	3887	18	FSM	ENSG00000164163.11	ENST00000296577.9	3887	18	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_11	78.4887535196333	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTTGACAAGGACAAT	4	True	NA	NA	False	AATAAA	-20	NA	145098310	145129524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
transcript_73782.nic	chr4	+	1217	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-28	7511	-5	2647	5prime_fragment	FALSE	canonical	3	626	junction_10	73.0540211076707	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAAGAAAAAAATGGG	-24	True	NA	NA	False	TATAAA	-7	NA	145098282	145120062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_73784.nic	chr4	+	1802	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	42.9249991910956	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	16	False	NA	NA	False	TTTAAA	-2	NA	145481669	145558079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_145481753_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73785.nnic	chr4	+	1783	7	NNC	ENSG00000170365.10	novel	3293	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	41.551841782953	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	-1	True	NA	NA	False	TTTAAA	-2	NA	145481680	145558079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_145481745_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73786.nic	chr4	+	1836	7	NIC	ENSG00000170365.10	novel	2085	7	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	46.3896540189728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	847	False	NA	NA	False	TTTAAA	-2	NA	145482703	145558079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_145482821_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73787.known	chr4	+	1658	7	FSM	ENSG00000170365.10	ENST00000394092.6	1658	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.4871116896026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAACTATTGAGCCTT	14	True	NA	NA	False	NA	NA	NA	145482804	145557954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_145482869_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_73788.known	chr4	+	2085	7	FSM	ENSG00000170365.10	ENST00000515385.1	2085	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	47.4368000607124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	20	True	NA	NA	False	TTTAAA	-2	NA	145482810	145558079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_145483177_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_7379.known	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.3078017090559	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	2	True	NA	NA	False	NA	NA	NA	155241249	155234451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
transcript_73790.known	chr4	+	5944	7	FSM	ENSG00000151611.17	ENST00000649156.2	5944	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.93821943216622	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGGGATCATGTAGT	1	True	NA	3	True	GATAAA	-18	NA	145619384	145660033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_73793.known	chr4	+	549	5	FSM	ENSG00000164167.12	ENST00000504181.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	540.165946723782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAATTGGAAAGCCAA	16	True	NA	NA	False	AATAAA	-1	NA	146175747	146190187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_146175812_146182911_146183016_146187273_146187388_146189621_146189782_146190080
transcript_73796.known	chr4	+	454	4	FSM	ENSG00000164167.12	ENST00000649747.1	454	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	611.187005388331	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCACTGACATGTGAGT	-4	True	NA	-36	True	NA	NA	NA	146175727	146189767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_146175812_146182905_146183016_146187273_146187388_146189621
transcript_73798.known	chr4	-	3756	12	FSM	ENSG00000120519.16	ENST00000335472.12	3756	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.74238238709061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTGTGGCTTATTTT	-14	True	NA	-3	True	ATTAAA	-25	NA	146521940	146253980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146256521_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146442782_146442822_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_73799.known	chr4	-	3747	11	FSM	ENSG00000120519.16	ENST00000432059.6	3747	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.11287648325468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCTTATTTTTAACCT	364	False	NA	3	True	ATTAAA	-31	NA	146521964	146253974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146256521_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_73802.known	chr4	-	2178	13	FSM	ENSG00000137473.19	ENST00000325106.9	2178	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	1.73205080756888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTAAGTCCTTCAAT	-9	True	NA	NA	False	AATAAA	-24	NA	146945864	146706616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146707189_146707484_146707552_146803456_146803686_146820124_146820249_146833805_146833898_146867497_146867584_146874715_146874929_146903543_146903730_146909025_146909250_146937593_146937678_146939803_146939902_146945030_146945078_146945708
transcript_73804.known	chr4	-	1777	13	FSM	ENSG00000137473.19	ENST00000504425.5	1777	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5603819159562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGATTTTGCATTTCAGT	3	True	NA	NA	False	AATAAA	-20	NA	146945882	146707032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_146707189_146707484_146707549_146803456_146803686_146820124_146820249_146833805_146833898_146867497_146867584_146874715_146874929_146903543_146903730_146909025_146909250_146937593_146937678_146939803_146939902_146945030_146945078_146945708
transcript_73806.known	chr4	-	3461	12	FSM	ENSG00000164169.13	ENST00000322396.7	3461	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	27.0432772232806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCGTGCTCTTTGTA	-21	True	NA	NA	False	AATAAA	-25	NA	147684163	147637784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147680322_147680472_147683798
transcript_73807.nnic	chr4	+	2725	10	NNC	ENSG00000164168.8	novel	4164	10	NA	NA	-20	693	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	110.794103332864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCAACTTTTTTATG	NA	False	NA	10	True	AATAAA	-18	NA	147617365	147635221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632872_147633003_147633764_147633937_147634168
transcript_73808.known	chr4	+	4164	10	FSM	ENSG00000164168.8	ENST00000296582.8	4164	10	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_9	32.2042095247052	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAAGGGTTAGTATCC	-7	True	NA	NA	False	AGTAAA	-22	NA	147617396	147636721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632902_147633003_147633764_147633937_147634168
transcript_73813.known	chr4	-	2674	11	FSM	ENSG00000164169.13	ENST00000514886.1	2674	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	45.2013274141369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGGGTAGCATTAT	17	True	NA	-8	True	AATAAA	-20	NA	147684125	147638384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147683798
transcript_73816.known	chr4	-	10148	57	FSM	ENSG00000198589.14	ENST00000651943.2	10148	57	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_56	49.389641977786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCAGTCCTAGTTT	-6	True	NA	-5	True	AATAAA	-32	NA	151015284	150264434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_73818.nic	chr4	-	1567	9	ISM	ENSG00000198589.14	ENST00000507224.5	8826	51	-10	599371	-3	-73554	5prime_fragment	FALSE	canonical	3	86	junction_8	19.2856812169029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGAGACCTACTATT	-9	True	NA	NA	False	NA	NA	NA	151015287	150914093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_7382.known	chr1	-	2063	10	FSM	ENSG00000177628.16	ENST00000427500.7	2063	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	33.6378681375545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCGGAAGCCTTAAAGCAG	2	True	NA	NA	False	NA	NA	NA	155241275	155234558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239885_155240078_155240629_155240718_155241085
transcript_73821.nnic	chr4	-	3027	9	NNC	ENSG00000198589.14	novel	8826	51	NA	NA	-33947	-73554	intron_retention	TRUE	canonical	3	39	junction_7	41.4817354386241	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGAGACCTACTATT	6187	False	NA	NA	False	NA	NA	NA	151049674	150914093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151049349_151049387_151049431
transcript_73823.nic	chr4	-	2833	8	NIC	ENSG00000198589.14	novel	8826	51	NA	NA	-3	-73554	intron_retention	FALSE	canonical	3	86	junction_7	20.6150331514828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGAGACCTACTATT	-9	True	NA	NA	False	NA	NA	NA	151015287	150914093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_73824.known	chr4	-	2140	2	FSM	ENSG00000198589.14	ENST00000514435.1	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTACTTTTGAAGAAT	-6	True	NA	NA	False	AAAAAG	-4	NA	151015284	151012804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151014862_151015201
transcript_73825.known	chr4	-	2288	2	FSM	ENSG00000198589.14	ENST00000510841.1	2288	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	151015727	151012828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151014862_151015472
transcript_73826.known	chr4	+	2543	1	FSM	ENSG00000181541.6	ENST00000317605.6	2543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGTTTGTGGATTGTT	9	True	NA	NA	False	AATAAA	-21	NA	150582150	150584693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_150582200_150584700
transcript_73827.known	chr4	+	862	6	FSM	ENSG00000145425.10	ENST00000506126.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7159.26196196228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATTTGTGATGGTTT	31	False	NA	-1	True	AATAAA	-2	NA	151099673	151104623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099715_151100426_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_73828.known	chr4	+	985	6	FSM	ENSG00000145425.10	ENST00000514682.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7160.45952156704	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	18	True	NA	13	True	AATAAA	-16	NA	151099628	151104637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099837_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_73833.known	chr4	+	576	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8514.79032168275	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	13	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
transcript_73834.known	chr4	+	671	6	FSM	ENSG00000145425.10	ENST00000515792.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	7460.13073343893	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	28	False	NA	13	True	AATAAA	-16	NA	151099670	151104637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_151099715_151100484_151100589_151100974_151101013_151102870_151103080_151104176_151104287_151104471
transcript_73835.known	chr4	-	2369	13	FSM	ENSG00000059691.12	ENST00000263985.11	2369	13	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	20.0005208265518	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCCAATAAATTTA	-10	True	NA	NA	False	AATAAA	-14	NA	151761007	151670503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_73838.known	chr4	-	1860	13	FSM	ENSG00000059691.12	ENST00000503160.5	1860	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	41.064650924555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACTGTTACCCATT	67	False	NA	-29	True	AATAAA	-9	NA	151760930	151670862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717002_151719424_151719539_151758771_151758923_151760806
transcript_73840.nnic	chr4	-	1927	12	NIC	ENSG00000059691.12	novel	2369	13	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	39.8339528750649	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTCTAAGAAAACTTTT	NA	False	NA	-15	True	AATAAA	-23	NA	151761045	151670848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_151671303_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_73844.known	chr4	-	1519	8	FSM	ENSG00000059691.12	ENST00000512306.5	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.025224930956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATTGAAACTTTTA	12	True	NA	NA	False	AATAAA	-21	NA	151760985	151703341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_73845.known	chr4	-	605	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	88	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTTTACTGCC	7	True	NA	2	True	ATTAAA	-24	NA	151760990	151721945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_151722216_151758771_151758923_151760806
transcript_73846.nic	chr4	-	1687	2	ISM	ENSG00000059691.12	ENST00000508611.1	605	3	-55	35529	-38	-35529	5prime_fragment	FALSE	canonical	3	180	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTGGAAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	151761045	151757474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_151758923_151760806
transcript_73847.known	chr4	+	3000	1	FSM	ENSG00000268471.6	ENST00000604157.1	3000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTATATATGAGTCCCA	-21	True	NA	42	True	AATAAA	-39	NA	152536263	152539263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152536300_152539300
transcript_73848.known	chr4	-	10534	7	FSM	ENSG00000170006.12	ENST00000304385.8	10534	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGCTTCTCTTCTTT	5	True	NA	NA	False	ATTAAA	-28	NA	152679997	152618627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_152628562_152640927_152640986_152643087_152643174_152644414_152644443_152652537_152652577_152652666_152652928_152679869
transcript_7385.known	chr1	-	1499	5	FSM	ENSG00000160767.22	ENST00000487649.5	1499	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	61.5243854093643	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACGTGTGCCTATGCAA	7241	False	NA	NA	False	NA	NA	NA	155255191	155247426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155253624_155253733_155254652
transcript_73851.known	chr4	-	2438	2	FSM	ENSG00000169989.3	ENST00000304337.3	2438	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTTAATTGCAAAA	15	True	NA	NA	False	CATAAA	-18	NA	152779730	152769353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_152771543_152779481
transcript_73855.known	chr4	+	3542	9	FSM	ENSG00000164144.16	ENST00000353617.7	3542	9	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	63.5231257102482	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	-17	True	NA	NA	False	AATAAA	-21	NA	152779953	152912357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73857.known	chr4	+	3424	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	83.9455738857029	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	-34	True	NA	NA	False	AATAAA	-21	NA	152779936	152912357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73860.known	chr4	+	1302	8	FSM	ENSG00000164144.16	ENST00000356064.3	1302	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	45.7116070643788	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGTTGTTATATTTCTA	14	True	NA	NA	False	AATAAA	-7	NA	152779984	152910244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73861.known	chr4	+	1601	8	FSM	ENSG00000164144.16	ENST00000405727.6	1601	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	78.8778440736959	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAAACTATTT	0	True	NA	NA	False	ATTAAA	-30	NA	152779970	152910664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_73866.known	chr4	+	514	4	FSM	ENSG00000164144.16	ENST00000510831.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTAGTTCCTAAATAT	22	True	NA	NA	False	AATAAA	-17	NA	152779992	152810388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_152780092_152807203_152807249_152809672_152809734_152810079
transcript_73868.known	chr4	-	1048	2	FSM	ENSG00000287642.2	ENST00000685840.1	1344	2	120	176	116	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	84	False	NA	NA	False	AATAAA	-16	NA	152936761	152934515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_152935451_152936648
transcript_73870.known	chr4	+	6755	12	FSM	ENSG00000109654.16	ENST00000338700.10	6755	12	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	30.7525447445323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	-1	True	NA	14	True	AATAAA	-15	NA	153204442	153339317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_73873.known	chr4	+	6871	12	FSM	ENSG00000109654.16	ENST00000675977.1	6871	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	43.8713370536622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	NA	False	NA	8	True	AATAAA	-9	NA	153257367	153339311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153257608_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_73874.known	chr4	+	679	3	FSM	ENSG00000109654.16	ENST00000632856.2	679	3	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	39	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	-1	True	NA	14	True	ATTAAA	-17	NA	153204442	153276268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153204561_153270334_153270520_153275892
transcript_73876.known	chr4	+	766	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	65	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	18	False	NA	14	True	ATTAAA	-17	NA	153257402	153276268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153257608_153270334_153270520_153275892
transcript_73877.nnic	chr4	+	1289	8	NIC	ENSG00000121211.8	novel	638	6	NA	NA	263	110	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	105.276312819249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAGTGTAAAATGC	252	False	NA	-9	True	NA	NA	NA	153344950	153414975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_153345507_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_73880.known	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	34.1461444920722	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	-11	True	NA	29	True	AATAAA	-42	NA	153344687	153415118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_73886.known	chr4	+	830	7	FSM	ENSG00000121211.8	ENST00000622785.4	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	114.373656640563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAGATTTACAAATGAT	-1	True	NA	6	True	AATAAA	-19	NA	153344648	153415095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153408970_153409016_153414750
transcript_73888.nnic	chr4	+	797	7	NIC	ENSG00000121211.8	novel	929	8	NA	NA	-26	-99	combination_of_known_splicesites	TRUE	canonical	2	3	junction_4	116.415563106199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCTTCACCCCTTTTG	5656	False	NA	12	True	AATAAA	-13	NA	153344622	153414996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153397218_153397334_153408970_153409016_153414750
transcript_73903.known	chr4	-	3317	15	FSM	ENSG00000171566.12	ENST00000499023.7	3317	15	0	0	0	0	multi-exon	TRUE	canonical	3	491	junction_4	57.9583330276755	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATTCCTGAGAGAT	8	True	NA	-8	True	AATAAA	-16	NA	154550400	154535004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547010_154547065_154547710_154547854_154548828_154548936_154550299
transcript_73906.known	chr4	-	1673	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	153.884929179473	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGATATCCAGTCATTT	11	True	NA	-6	True	ATTAAA	-21	NA	154550397	154536618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
transcript_7391.known	chr1	-	1545	9	FSM	ENSG00000116521.11	ENST00000302631.8	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_7	60.3053428395859	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-3	True	NA	-3	True	AATAAA	-23	NA	155262360	155255980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_73917.known	chr4	-	2209	5	FSM	ENSG00000171560.17	ENST00000403106.8	2209	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTGAAACTCTATTTG	1	True	NA	-15	True	AATAAA	-24	NA	154590742	154585274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_154586919_154587511_154587658_154588792_154588977_154589436_154589563_154590633
transcript_73920.known	chr4	+	1776	3	FSM	ENSG00000121207.12	ENST00000500890.6	1776	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAAATGGGACT	NA	False	NA	NA	False	AAAAAG	-17	NA	154626944	154699900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_154627150_154636328_154636397_154698397
transcript_73923.known	chr4	+	4901	3	FSM	ENSG00000121207.12	ENST00000336356.4	4901	3	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	85.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTCTTTAAATTTTAAA	0	True	NA	9	True	AATAAA	-18	NA	154743999	154753120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_154744223_154744325_154744867_154748983
transcript_73929.known	chr4	+	5002	2	FSM	ENSG00000121207.12	ENST00000510733.1	5002	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTCTTTAAATTTTA	0	True	NA	7	True	AATAAA	-16	NA	154743999	154753118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_154744867_154748983
transcript_73937.known	chr4	-	7328	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	14.8813850599255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCCTTTTTATGTTT	-10	True	NA	-37	True	AATAAA	-20	NA	155376965	155342657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_7394.nic	chr1	-	1462	8	ISM	ENSG00000116521.11	ENST00000302631.8	1545	9	434	0	-58	0	3prime_fragment	FALSE	canonical	3	493	junction_7	59.2955241453642	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	506	False	NA	-3	True	AATAAA	-23	NA	155261926	155255980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656
transcript_73942.known	chr4	-	7113	14	FSM	ENSG00000164114.19	ENST00000650955.1	7113	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	21.5585071553953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATGTTATAAATAAAAC	7	True	NA	-56	True	AATAAA	-1	NA	155376813	155342676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375871_155376770
transcript_73944.nnic	chr4	-	2044	13	NNC	ENSG00000164114.19	novel	7328	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	21.6581714114763	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATGAGAAAAGAAAGG	12	True	NA	NA	False	AAAAAG	-33	NA	155376808	155352683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376558
transcript_73952.known	chr4	-	1828	12	FSM	ENSG00000164114.19	ENST00000424373.5	1828	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.1023593657545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATGAGAAAAGAAAGG	-15	True	NA	NA	False	AAAAAG	-33	NA	155376970	155352683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_73959.nic	chr4	-	2086	12	NIC	ENSG00000164114.19	novel	7328	14	NA	NA	5	245	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	19.6746260216277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAGGAGAGAGAATATG	12	True	NA	44	True	AAAAAG	-24	NA	155376808	155353007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376375
transcript_7396.known	chr1	-	1537	8	FSM	ENSG00000116521.11	ENST00000355379.3	1537	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	178.035080239593	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	2	False	NA	-3	True	AATAAA	-23	NA	155262430	155255980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155262085
transcript_73967.known	chr4	-	1644	11	FSM	ENSG00000164114.19	ENST00000433024.5	1644	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	15.6384142418597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCTTGAAGAAAAA	-4	True	NA	NA	False	AAGAAA	-25	NA	155376885	155353252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_7398.known	chr1	-	2120	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	95.5133789348673	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	-4	True	NA	-8	True	AATAAA	-19	NA	155273482	155262873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
transcript_73984.known	chr4	+	3382	14	FSM	ENSG00000061918.14	ENST00000264424.13	3382	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	6.37116284333805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTCATCAGCTTA	-25	True	NA	NA	False	AATAAA	-31	NA	155759020	155807811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802341_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_73985.known	chr4	+	1951	14	FSM	ENSG00000061918.14	ENST00000503520.5	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	9.01609343498626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCTCACTATCCGTT	44	True	NA	NA	False	NA	NA	NA	155759089	155806548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802440_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_73986.known	chr4	-	2903	8	FSM	ENSG00000256043.5	ENST00000433477.4	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.12297745058317	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCTTAAGTGTATGGC	20	True	NA	1	True	AATAAA	-33	NA	155953866	155924117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_155926071_155928335_155928429_155929541_155929706_155937361_155937484_155939370_155939539_155942316_155942457_155943155_155943265_155953712
transcript_7399.known	chr1	-	1934	13	FSM	ENSG00000176444.19	ENST00000361168.9	1934	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	79.5385999932667	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	239	False	NA	-2	True	AATAAA	-25	NA	155273287	155262867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269717_155270807_155270978_155273200
transcript_73991.known	chr4	-	4570	6	FSM	ENSG00000145431.11	ENST00000502773.6	4570	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	3.42928563989645	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCAGGTGTTCATGTCT	4	True	NA	NA	False	AATAAA	-19	NA	156971799	156760453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_156763207_156767772_156767991_156772685_156772894_156810836_156811018_156850220_156850417_156970785
transcript_73993.known	chr4	+	3210	13	FSM	ENSG00000164124.11	ENST00000296529.11	3210	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	5.22547180219696	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTATTACCTCTATA	-1	True	NA	NA	False	AGTAAA	-26	NA	158210485	158255416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158210587_158211452_158211575_158212607_158212777_158215190_158215314_158217320_158217421_158219309_158219391_158232900_158232983_158235437_158235506_158237524_158237644_158240298_158240419_158241508_158241607_158244295_158244350_158253443
transcript_73999.known	chr4	+	3111	13	FSM	ENSG00000171503.13	ENST00000511912.6	3111	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	11.1080551353011	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAGGTGTCAAAAGAA	-20	True	NA	NA	False	NA	NA	NA	158672295	158709623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158672491_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_74.known	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4568	junction_1	920.380718326208	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
transcript_7400.nic	chr1	-	2068	13	NIC	ENSG00000176444.19	novel	2120	13	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_11	79.1196351525123	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	99	False	NA	-8	True	AATAAA	-19	NA	155273427	155262873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269714_155270807_155270978_155273200
transcript_74004.known	chr4	-	1830	10	FSM	ENSG00000171497.5	ENST00000307720.4	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_5	57.7850422783536	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTCCTTCGATTCTT	-3	True	NA	-5	True	AATAAA	-23	NA	158723396	158709126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158709825_158710627_158710671_158710761_158710849_158713118_158713261_158715296_158715404_158715561_158715685_158717011_158717201_158719179_158719287_158721342_158721484_158723203
transcript_7401.known	chr1	-	2154	13	FSM	ENSG00000176444.19	ENST00000368361.9	2154	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_10	57.1328860348107	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	22	False	155273526	-2	True	AATAAA	-25	NA	155273504	155262867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269717_155270807_155270978_155273200
transcript_74015.known	chr4	+	987	2	FSM	ENSG00000171503.13	ENST00000510353.5	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAGA	0	True	NA	24	True	NA	NA	NA	158672315	158680101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_158672491_158679289
transcript_74017.known	chr4	-	3366	2	FSM	ENSG00000205208.5	ENST00000379205.5	3366	2	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTTTGTTATAGGGA	-12	True	NA	-2	True	AATAAA	-24	NA	158671887	158666674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158669769_158671615
transcript_74018.known	chr4	-	1103	2	FSM	ENSG00000205208.5	ENST00000508836.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTTTTTGTACTTG	NA	False	NA	NA	False	AATATA	-3	NA	158672255	158668924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158669769_158671996
transcript_74023.known	chr4	-	3358	2	FSM	ENSG00000205208.5	ENST00000508457.1	3358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTAATCTGTCTTTTG	-17	True	NA	-11	True	AATAAA	-15	NA	158671892	158666683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_158669765_158671615
transcript_74024.known	chr4	-	1159	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	78.3212756677406	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAACTTTTTGCTGTTCT	127	False	NA	-7	True	AATAAA	-9	NA	163166752	163156963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
transcript_74027.known	chr4	-	2762	3	FSM	ENSG00000164128.7	ENST00000296533.3	2762	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-1	True	NA	-2	True	ATTAAA	-27	NA	163332596	163323961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_163325759_163325855_163326706_163332481
transcript_74028.nic	chr4	-	2739	3	NIC	ENSG00000164128.7	novel	2762	3	NA	NA	436	0	intron_retention	FALSE	canonical	3	13	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	451	False	NA	-2	True	ATTAAA	-27	NA	163344396	163323961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_163325759_163325855_163326706_163344304
transcript_7403.known	chr1	-	1885	12	FSM	ENSG00000176444.19	ENST00000476983.5	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	96.1325703098599	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	197	False	NA	-8	True	AATAAA	-19	NA	155273329	155262873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269717_155270807_155270978_155273200
transcript_74034.known	chr4	+	1749	7	FSM	ENSG00000198498.10	ENST00000358572.10	1749	7	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_2	64.9965811066671	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACAGTCCTAATTTT	25	True	NA	20	True	AATAAA	-20	NA	163494689	163520539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_74038.known	chr4	+	933	7	FSM	ENSG00000198498.10	ENST00000509657.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	306.022557265891	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATCTGCAGAAGTTG	1180	False	NA	NA	False	AATAGA	-3	NA	163494441	163519720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163494560_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_74044.known	chr4	+	803	6	FSM	ENSG00000198498.10	ENST00000513272.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	345.144955055119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGATCTGCAGAAGTT	2	True	NA	NA	False	AATAGA	-2	NA	163494666	163519719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163517433_163517477_163519333
transcript_74052.known	chr4	+	927	1	FSM	ENSG00000273449.1	ENST00000609356.1	927	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAACTTAGTTTTTGAGT	NA	False	NA	NA	False	AATAAA	-27	NA	163529770	163530697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_163529800_163530700
transcript_74064.known	chr4	+	2432	3	FSM	ENSG00000248329.6	ENST00000507152.6	2432	3	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_2	36.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGTCCTTACTTT	-7	True	NA	26	True	AATAAA	-18	NA	164877177	164897527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_164877408_164878919_164879010_164895415
transcript_74065.nnic	chr4	+	834	3	NIC	ENSG00000248329.6	novel	674	4	NA	NA	-232	42	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	293	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGAGTGAGTGTGGTG	NA	False	NA	NA	False	AATAAA	-28	NA	164876945	164899007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_164877408_164878919_164879010_164898725
transcript_74069.known	chr4	+	551	2	FSM	ENSG00000248329.6	ENST00000515275.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACAGCTATTTGGGGG	9	True	NA	NA	False	NA	NA	NA	164877193	164879256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_164877408_164878919
transcript_74071.known	chr4	-	2237	3	FSM	ENSG00000183439.9	ENST00000508856.2	2237	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	28.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAACATATATTACT	9	False	NA	NA	False	ATTAAA	-45	NA	164977668	164968373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_164970340_164976687_164976821_164977530
transcript_74074.nic	chr4	-	2179	7	NIC	ENSG00000170088.14	novel	789	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.9472953214964	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTTTTCAGAGCAAAT	-4	True	NA	-16	True	ATTAAA	-27	NA	165112867	165078419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165111648_165111680_165112746
transcript_74076.known	chr4	-	9953	6	FSM	ENSG00000170088.14	ENST00000306480.11	9953	6	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_2	5.03587132480567	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATAATCACTGCTAT	3	True	NA	-5	True	AATAAA	-17	NA	165112860	165070607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165112746
transcript_7408.nic	chr1	-	2833	9	ISM	ENSG00000143627.19	ENST00000342741.6	3047	11	5570	0	5088	0	3prime_fragment	FALSE	canonical	3	11	junction_4	3.44374432848898	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAACAAGCGAAGAAA	5564	False	NA	NA	False	AATAAA	-19	NA	155295868	155289292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155290679_155291755_155291938_155293176_155293344_155293437_155293591_155294234_155294386_155294481_155294753_155295115_155295303_155295436_155295569_155295664
transcript_74084.nic	chr4	-	476	2	ISM	ENSG00000170088.14	ENST00000306480.11	9953	6	-53	32180	-53	-17202	5prime_fragment	FALSE	canonical	3	40	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACGTACACTTTTACT	NA	False	NA	NA	False	NA	NA	NA	165112913	165102787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_165103097_165112746
transcript_74085.known	chr4	+	3185	15	FSM	ENSG00000109466.14	ENST00000226725.11	3185	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	13.4952750612795	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACAGTGTTCTTG	0	True	NA	12	True	AATAAA	-14	NA	165207560	165323147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165207903_165219933_165220060_165228806_165228914_165238777_165238900_165263196_165263360_165294358_165294469_165297608_165297726_165299506_165299657_165305607_165305726_165310552_165310751_165311463_165311566_165313237_165313367_165314025_165314167_165317825_165317970_165322031
transcript_74087.known	chr4	+	2227	6	FSM	ENSG00000052802.13	ENST00000261507.11	2227	6	0	0	0	0	multi-exon	FALSE	canonical	3	1504	junction_1	75.5671886469253	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	-36	True	NA	17	True	AATAAA	-2	NA	165327668	165343164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_74089.nic	chr4	+	2274	6	NIC	ENSG00000052802.13	novel	2227	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	608.268493348127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	-36	True	NA	-15	True	ATTAAA	-39	NA	165327668	165343029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_74090.nic	chr4	+	2353	6	NIC	ENSG00000052802.13	novel	2227	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	608.268493348127	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	20	True	NA	17	True	AATAAA	-2	NA	165327724	165343164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_74091.known	chr4	+	1789	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	603.396791091898	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	-19	True	NA	-15	True	ATTAAA	-39	NA	165327685	165343029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_74094.known	chr4	+	2582	9	FSM	ENSG00000109472.14	ENST00000402744.9	2582	9	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_8	67.2416351675061	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGACACAAACTCTAA	-1	True	NA	119	True	TATAAA	-16	NA	165379007	165498547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_165379529_165464389_165464587_165467687_165467856_165482241_165482360_165484421_165484605_165487437_165487578_165493170_165493271_165495558_165495678_165497511
transcript_74095.known	chr4	-	2900	11	FSM	ENSG00000196104.11	ENST00000504953.5	2900	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	7.66093989011792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAACTGTTCCTCAAT	NA	False	NA	-5	True	AATAAA	-14	NA	167234757	166733386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_166735091_166737466_166737605_166741996_166742060_166754507_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234693
transcript_74097.known	chr4	-	1456	8	FSM	ENSG00000196104.11	ENST00000512648.5	1456	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.35687022503589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCATTCACCATAAAG	9	True	NA	NA	False	ATTAAA	-14	NA	167234552	166754085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234449
transcript_74099.known	chr4	-	1253	7	FSM	ENSG00000137628.18	ENST00000681832.1	1253	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.13437474581095	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTGTGCCATTAAATGA	-2	True	NA	NA	False	AATAAA	-28	NA	168318727	168293627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_168293946_168302299_168302417_168306378_168306721_168308005_168308196_168310997_168311068_168311255_168311366_168318621
transcript_7410.nic	chr1	-	1868	9	ISM	ENSG00000143627.19	ENST00000392414.7	2479	11	5133	419	5088	-419	3prime_fragment	FALSE	canonical	3	11	junction_4	3.44374432848898	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGTTTGGCTGGTTAAT	5564	False	NA	-4	True	NA	NA	NA	155295868	155290257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155290679_155291755_155291938_155293176_155293344_155293437_155293591_155294234_155294386_155294481_155294753_155295115_155295303_155295436_155295569_155295664
transcript_74100.nic	chr4	+	1716	11	NIC	ENSG00000129116.19	novel	4392	12	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	74.3892465346975	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATTAAAAAAAAAACA	40	False	NA	-16	True	NA	NA	NA	168832073	168926487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_168832172_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_74101.nic	chr4	+	3646	11	NIC	ENSG00000129116.19	novel	4392	12	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	74.3892465346975	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCAGTTTTGTGAAGC	40	False	NA	-23	True	AATAAA	-15	NA	168832073	168928417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_168832172_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_74103.nnic	chr4	-	3586	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	70.0325638542528	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTAATTTTAT	4018	False	NA	-5	True	AATAAA	-19	NA	169010317	168987589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_74105.nnic	chr4	-	1181	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-42	-2405	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	70.0325638542528	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTGACAAATTGTGG	4018	False	NA	-11	True	TATAAA	-18	NA	169010317	168989994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_74107.nic	chr4	-	906	5	NIC	ENSG00000145439.12	novel	1052	5	NA	NA	-42	-30830	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	94.4947088465804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTAGCAGTCGACGAGC	4018	False	NA	-20	True	ATTAAA	-17	NA	169010317	168894622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_168894766_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_74108.known	chr4	-	3440	5	FSM	ENSG00000145439.12	ENST00000306193.8	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	40.9298179815156	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTAATTTTAT	8	True	NA	-5	True	AATAAA	-19	NA	169010255	168987589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_168990329_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_74112.nnic	chr4	-	1711	5	NNC	ENSG00000145439.12	novel	1602	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	117.606334863391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	5	True	NA	NA	False	NA	NA	NA	169010258	169001168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_169002206_169006754_169006892_169007635_169007757_169008951_169009057_169009947
transcript_74113.nnic	chr4	-	962	4	NIC	ENSG00000145439.12	novel	3440	5	NA	NA	-42	-2405	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	110.073712675744	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTGACAAATTGTGG	4018	False	NA	-11	True	TATAAA	-18	NA	169010317	168989994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_168990329_169006754_169006892_169007635_169007757_169009947
transcript_74114.known	chr4	-	1602	4	FSM	ENSG00000145439.12	ENST00000504480.5	1602	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	4.96655480858378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	9	True	NA	NA	False	NA	NA	NA	169010254	169001168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_169002206_169006754_169006892_169007635_169007757_169009947
transcript_74117.nic	chr4	-	2388	10	ISM	ENSG00000154447.15	ENST00000284637.14	5120	12	-56	22010	-56	0	5prime_fragment	FALSE	canonical	3	104	junction_7	11.8133634311129	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACCATACTTACTTAC	1	True	NA	2	True	NA	NA	NA	169271012	169116268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_74124.known	chr4	-	5536	35	FSM	ENSG00000137601.18	ENST00000511633.5	5536	35	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	11.1305558422031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAGTATATCAATTG	-22	True	NA	-10	True	ATTAAA	-12	NA	169612627	169393280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_169394524_169400224_169400358_169400520_169400652_169401651_169401861_169406595_169406748_169424552_169424801_169426145_169426235_169433544_169433666_169438082_169438260_169463242_169463396_169477123_169477353_169477431_169477498_169479402_169479535_169507036_169507133_169507714_169507793_169508247_169508332_169508768_169508853_169537808_169537912_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
transcript_74129.nic	chr4	-	1756	15	ISM	ENSG00000137601.18	ENST00000688653.1	3922	17	0	2623	0	-2471	5prime_fragment	FALSE	canonical	3	26	junction_1	8.05751012334177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGGGTAAGAGG	-21	True	NA	NA	False	AATGAA	-23	NA	169612626	169561698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
transcript_74130.nic	chr4	-	1834	14	ISM	ENSG00000137601.18	ENST00000692218.1	4172	15	-1	2471	0	-2471	5prime_fragment	FALSE	canonical	3	26	junction_1	8.1203958279364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGGGTAAGAGG	-21	True	NA	NA	False	AATGAA	-23	NA	169612626	169561698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019
transcript_74132.nic	chr4	-	1696	14	ISM	ENSG00000137601.18	ENST00000688653.1	3922	17	0	2777	0	-2625	5prime_fragment	FALSE	canonical	3	29	junction_5	7.62431488822392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAACAAAAGGATCA	-21	True	NA	NA	False	AAGAAA	-26	NA	169612626	169561852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
transcript_74134.nic	chr4	-	1774	13	ISM	ENSG00000137601.18	ENST00000692218.1	4172	15	-1	2625	0	-2625	5prime_fragment	FALSE	canonical	3	29	junction_5	7.5773786144462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAACAAAAGGATCA	-21	True	NA	NA	False	AAGAAA	-26	NA	169612626	169561852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_-_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019
transcript_74142.known	chr4	+	3635	14	FSM	ENSG00000109572.15	ENST00000347613.8	3635	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	34.2662737220273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCTCTCTACTGAG	8	False	NA	NA	False	NA	NA	NA	169620525	169720545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169717791_169717868_169719906
transcript_74144.known	chr4	+	6635	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_12	15.7788536409405	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAGTAGATCATTTAT	15	True	NA	NA	False	AGTAAA	-17	NA	169620577	169723673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
transcript_74151.known	chr4	-	1216	8	FSM	ENSG00000056050.7	ENST00000393381.3	1216	8	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_4	67.2175875915869	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	20	False	169757964	-9	True	AATAAA	-18	NA	169757944	169729469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_74154.nnic	chr4	-	1180	7	NIC	ENSG00000056050.7	novel	1216	8	NA	NA	-63	0	combination_of_known_splicesites	TRUE	canonical	3	41	junction_4	248.272028227104	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	NA	False	NA	-9	True	AATAAA	-18	NA	169758007	169729469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169750535_169750726_169753675_169753836_169757829
transcript_74158.nnic	chr4	+	734	3	FSM	ENSG00000289508.1	ENST00000691072.1	666	3	-72	4	-72	-4	multi-exon	FALSE	canonical	2	4	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-3	True	NA	18	True	AATAAA	-18	NA	169940203	169941680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_169940343_169940520_169940661_169941225
transcript_74160.nnic	chr4	+	732	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	-20	True	NA	18	True	AATAAA	-18	NA	169940241	169941680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_169940379_169940520_169940661_169941225
transcript_74165.known	chr4	-	2101	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	31.64185678167	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATACCTAAAGGCATCA	-7	True	NA	-14	True	AATAAA	-12	NA	170090221	170060228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_74169.known	chr4	-	2113	14	FSM	ENSG00000109576.14	ENST00000509167.5	2113	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	41.2643376552948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	0	True	NA	-7	True	AATAAA	-19	NA	170090214	170060221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089611_170089737_170090143
transcript_7417.known	chr1	+	1417	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	891.714393738264	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	-29	True	NA	13	True	AATAAA	-16	NA	155308865	155320665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_74170.known	chr4	-	2250	13	FSM	ENSG00000109576.14	ENST00000337664.9	2250	13	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_9	26.1006332405089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	8	True	NA	-7	True	AATAAA	-19	NA	170089956	170060221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_74175.nnic	chr4	-	798	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	36	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	56.6413276680552	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	1436	False	NA	-2	True	AATAAA	-30	NA	170090260	170075270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_74176.nnic	chr4	-	913	5	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	-12	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	52.0210294015795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	-4	True	NA	-2	True	AATAAA	-30	NA	170089968	170075270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_74177.known	chr4	-	810	6	FSM	ENSG00000109576.14	ENST00000507375.5	810	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	59.6925455982571	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACGCAAAAAGGAAATCT	1400	False	NA	NA	False	NA	NA	NA	170090296	170073160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090161
transcript_74180.known	chr4	+	786	4	FSM	ENSG00000250266.3	ENST00000665566.1	786	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	193.050943190306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCTGACCCTTTGACTC	NA	False	NA	8	True	AATAAA	-24	NA	170226540	170283039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_170226784_170276581_170276676_170278943_170279104_170282750
transcript_74181.nnic	chr4	+	1122	4	NNC	ENSG00000250266.3	novel	1569	4	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	189.589615280538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCATGCGTTGCGCATG	NA	False	NA	NA	False	AATAAA	-19	NA	170226553	170283719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_170226784_170276581_170276676_170282750_170283251_170283421
transcript_74182.known	chr4	+	1569	4	FSM	ENSG00000250266.3	ENST00000654867.1	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	172.541782379419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	-3	True	NA	NA	False	AATAAA	-23	NA	170226587	170283723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_170226784_170273658_170273965_170276581_170276676_170282750
transcript_74183.known	chr4	+	1316	3	FSM	ENSG00000250266.3	ENST00000667527.2	2474	3	0	1158	0	0	multi-exon	FALSE	canonical	3	391	junction_2	13.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170226534	170283723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_170226784_170276581_170276676_170282750
transcript_74186.nic	chr4	+	3797	12	NIC	ENSG00000109586.12	novel	4249	12	NA	NA	-42	346	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	178.614595018769	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGAGAATTGGTACTT	0	True	NA	NA	False	AATAAA	-20	NA	173168768	173323473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794_173297978_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_74188.known	chr4	+	4249	12	FSM	ENSG00000109586.12	ENST00000265000.9	4249	12	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_5	65.5047787039835	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	-1	True	NA	18	True	AATAAA	-19	NA	173168810	173323967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173298114_173298298_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_74201.known	chr4	-	1175	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	1007.36745406033	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-1	True	NA	-17	True	AATAAA	-14	NA	173334391	173331700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
transcript_74202.known	chr4	-	1441	5	FSM	ENSG00000164104.12	ENST00000296503.10	1441	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1069.70238267473	3017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATACACATATAT	-4	True	NA	NA	False	NA	NA	NA	173334358	173331375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334271
transcript_74209.known	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	710	False	NA	-21	True	AATAAA	-10	NA	173334432	173331704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173333215_173333499_173333670_173334271
transcript_74211.known	chr4	-	1032	4	FSM	ENSG00000164104.12	ENST00000438704.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	29.5108266385218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	19	True	NA	-17	True	AATAAA	-14	NA	173333672	173331700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499
transcript_74212.known	chr4	-	1026	3	FSM	ENSG00000272870.4	ENST00000609153.2	1026	3	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	1144	False	NA	-16	True	AATAAA	-13	NA	173370721	173363779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_173364199_173369433_173369611_173370291
transcript_74213.known	chr4	+	1643	2	ISM	ENSG00000286039.2	ENST00000652035.2	1777	3	1124	0	-24	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATTATAATGTATATA	-11	True	NA	NA	False	NA	NA	NA	173509632	173511764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_173509843_173510331
transcript_74215.known	chr4	-	1980	6	FSM	ENSG00000164117.14	ENST00000393674.7	1980	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.44522215417857	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGCTTATATGTG	-14	True	NA	3	True	AATAAA	-28	NA	174283667	174236657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_174237600_174238993_174239191_174241099_174241219_174259698_174259826_174262763_174263101_174283409
transcript_74218.known	chr4	+	3824	14	FSM	ENSG00000164118.13	ENST00000396791.7	3824	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	37.083784874143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTATTTCTCTGTTGA	-11	True	NA	NA	False	AATAAA	-20	NA	174283904	174332293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334_174318666_174318834_174319088_174331481
transcript_7422.known	chr1	+	1478	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	894.955105019241	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	21	True	NA	13	True	AATAAA	-16	NA	155308915	155320665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_74220.known	chr4	+	3290	11	FSM	ENSG00000164118.13	ENST00000457424.6	3290	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	33.8439063939138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTATTTTATGCAT	-12	True	NA	NA	False	AATAAA	-13	NA	174283903	174333380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174331481
transcript_74226.known	chr4	-	2619	7	FSM	ENSG00000164120.14	ENST00000296522.11	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.95078331845327	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTGTATTTTT	-1	True	NA	NA	False	ATTAAA	-21	NA	174522488	174490174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_74227.known	chr4	-	2854	8	FSM	ENSG00000150625.17	ENST00000280187.11	2854	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	25.2214680179325	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATCTGTTTTT	114	False	NA	-2	True	AATAAA	-35	NA	176002332	175632933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_175635058_175640128_175640195_175640752_175640830_175651833_175651988_175673679_175673837_175701574_175701768_175812190_175812250_176002308
transcript_74230.known	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	25.1843205189261	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	-17	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
transcript_74233.known	chr4	+	2363	10	FSM	ENSG00000109674.4	ENST00000264596.4	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	11.2051575426477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGTCTATTTTTAAA	-1	True	NA	NA	False	ATTAAA	-25	NA	177309873	177362936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379_177351550_177353307_177353729_177360502_177360678_177362288
transcript_74235.nic	chr4	+	1449	7	ISM	ENSG00000109674.4	ENST00000264596.4	2363	10	-21	11078	-21	-2421	5prime_fragment	FALSE	canonical	3	57	junction_3	9.55103252126293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCAGCAACTTTCGAGT	0	True	NA	NA	False	AATAAA	-16	NA	177309852	177351858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379
transcript_74239.known	chr4	-	2037	9	FSM	ENSG00000038002.9	ENST00000264595.7	2037	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	9.98749217771909	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAATTTCAGCTGTTT	3	True	NA	-4	True	AATAAA	-22	NA	177442437	177430773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_177431809_177433213_177433348_177434381_177434490_177436275_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_74243.nnic	chr4	-	1280	9	NIC	ENSG00000038002.9	novel	2037	9	NA	NA	-54	-789	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	34.6121365997536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTATATCTGAAATTGT	NA	False	NA	-13	True	AATAAA	-30	NA	177442491	177431562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_177431809_177433213_177433348_177434381_177434490_177436297_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_74249.known	chr4	-	539	3	FSM	ENSG00000250993.1	ENST00000512036.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTCGGCATGGTTG	266	False	NA	-7	True	TTTAAA	-18	NA	179465305	179389133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_179389502_179390029_179390090_179465194
transcript_74250.known	chr4	-	550	3	FSM	ENSG00000177822.9	ENST00000505537.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGTTGCTTATTTCAG	-4	True	NA	NA	False	ATTAAA	-18	NA	182085084	182079628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182079877_182081755_182081827_182084853
transcript_74253.nic	chr4	+	2047	2	ISM	ENSG00000218336.9	ENST00000513201.1	1237	4	-66	24565	-66	-21178	5prime_fragment	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATTAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	182143920	182325751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr4_+_182144162_182323945
transcript_74259.known	chr4	-	794	7	FSM	ENSG00000129187.15	ENST00000510370.5	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	227.37371342254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTATCGTCTTCTAA	221	False	182917412	NA	False	NA	NA	NA	182917389	182891371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182917287
transcript_74261.known	chr4	-	1931	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_5	79.3332212884363	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-15	True	NA	-20	True	ATTAAA	-17	NA	182917379	182890103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
transcript_74262.known	chr4	-	1928	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	147.510541996157	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-22	True	NA	-7	True	ATTAAA	-30	NA	182917386	182890090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
transcript_74263.known	chr4	+	2646	3	FSM	ENSG00000168564.6	ENST00000302350.4	2646	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	29.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTTTTTCTCCAA	-1	True	NA	20	True	ATTAAA	-30	NA	183444634	183448198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183445070_183445534_183445635_183446087
transcript_74265.known	chr4	+	3542	3	FSM	ENSG00000168564.6	ENST00000504169.2	3542	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	30	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGGTTTGGTAATTTC	0	True	NA	NA	False	AATAAA	-19	NA	183444635	183449064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183445070_183445534_183445666_183446087
transcript_74267.known	chr4	+	888	3	FSM	ENSG00000168564.6	ENST00000506835.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGAGCACTTCCCAG	400	False	NA	NA	False	AATACA	-11	NA	183445175	183446759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183445292_183445534_183445635_183446087
transcript_74269.known	chr4	+	860	2	FSM	ENSG00000168564.6	ENST00000510928.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCATCACCCGTTTT	-2	True	NA	NA	False	NA	NA	NA	183444696	183446021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183445070_183445534
transcript_74270.known	chr4	+	2458	2	FSM	ENSG00000168556.7	ENST00000302327.4	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTCCTTCATTCT	-3	True	NA	NA	False	NA	NA	NA	183505057	183512429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183505368_183510281
transcript_74272.known	chr4	+	599	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAATCCAAGTC	1021	False	NA	NA	False	NA	NA	NA	183506081	183510643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183506319_183510281
transcript_74274.known	chr4	-	1620	8	FSM	ENSG00000182552.15	ENST00000510702.5	1620	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	75.1963416391939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATTTATCTGCTGTTG	9	True	NA	NA	False	AATAAA	-1	NA	183659201	183640627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651324_183655880_183655962_183658928
transcript_74275.known	chr4	-	2590	7	FSM	ENSG00000182552.15	ENST00000327570.13	2590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.3994645226066	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACACATTTTATT	1	True	NA	-1	True	AATAAA	-20	NA	183659178	183639635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
transcript_74281.known	chr4	-	1551	6	FSM	ENSG00000182552.15	ENST00000510968.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.574047569033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGCTGAACTGTTA	59	False	NA	NA	False	NA	NA	NA	183659151	183640459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183658928
transcript_74283.known	chr4	+	4523	30	FSM	ENSG00000168538.16	ENST00000334690.11	4523	30	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_19	18.2479943679907	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	-17	True	NA	10	True	AATAAA	-16	NA	183659292	183713589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
transcript_74284.known	chr4	+	10507	4	FSM	ENSG00000173320.12	ENST00000308497.9	10507	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAAGTGGATTTTTTT	-11	True	NA	13	True	ATTAAA	-16	NA	183905306	184023526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_183906957_184001324_184001478_184009157_184011424_184017088
transcript_74286.known	chr4	-	2257	9	FSM	ENSG00000168310.11	ENST00000393593.8	2257	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	8.02729717900116	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGGGCATCACTCC	-13	True	NA	-17	True	AATAAA	-22	NA	184474550	184387728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184389067_184390702_184390750_184398914_184399080_184408157_184408276_184418166_184418214_184418531_184418709_184419468_184419569_184428977_184429071_184474378
transcript_74295.known	chr4	-	2645	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	336.723225531363	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-2	True	NA	-2	True	AATATA	-19	NA	184649447	184627695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_74297.known	chr4	-	2540	7	FSM	ENSG00000164305.19	ENST00000523916.5	2540	7	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_3	86.1890686546476	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	NA	False	NA	-2	True	AATATA	-19	NA	184649509	184627695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_74299.known	chr4	-	677	6	FSM	ENSG00000164305.19	ENST00000393588.8	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	318.339190172998	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGGCAACAGAATTTG	-10	False	NA	NA	False	NA	NA	NA	184649455	184629383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_743.known	chr1	+	3654	2	FSM	ENSG00000120942.14	ENST00000376810.6	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGGTCTGGCTTCTGGT	-13	True	NA	12	True	ATTAAA	-23	NA	11273197	11288434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11274061_11285643
transcript_74302.known	chr4	+	2164	14	FSM	ENSG00000164306.11	ENST00000314970.11	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	10.6798488564976	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGAAATCGCCTTAT	-9	True	NA	5	True	ATTAAA	-19	NA	184649737	184694952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_184649909_184652022_184652101_184657081_184657321_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_74306.known	chr4	+	2007	13	FSM	ENSG00000164306.11	ENST00000515774.5	2007	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	14.5342029556338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCCTTATTAATTAATCAA	-5	True	NA	16	True	ATTAAA	-30	NA	184649666	184694963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_184649909_184652022_184652101_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_74310.known	chr4	-	2494	13	FSM	ENSG00000151725.12	ENST00000281453.10	2494	13	0	0	0	0	multi-exon	FALSE	canonical	3	1165	junction_8	107.525061678145	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTGGATTGTATATTA	-14	True	NA	-4	True	ATTAAA	-15	NA	184734096	184694084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184695402_184697646_184697804_184700819_184700882_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_74317.known	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	386.634386417363	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	0	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_7432.known	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	436.07086863162	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	-6	True	NA	-5	True	NA	NA	NA	155308888	155320647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_74327.known	chr4	+	804	3	FSM	ENSG00000164306.11	ENST00000509538.5	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAGAAAGAAGTGTCAGC	9	True	NA	NA	False	NA	NA	NA	184649755	184657654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_184649909_184652022_184652101_184657081
transcript_74328.known	chr4	-	3712	21	FSM	ENSG00000151726.15	ENST00000281455.7	3712	21	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_20	10.2150624080326	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCATCTTTTTTAATG	-1	True	NA	-3	True	AATAAA	-21	NA	184825968	184755594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184825915
transcript_74331.nnic	chr4	+	1564	4	NNC	ENSG00000151729.11	novel	4415	4	NA	NA	-1	30	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	852.302893472867	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTCTATTTTATTGAAC	-1	True	NA	6	True	AATAAA	-15	NA	185143264	185147271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_185143484_185144763_185145251_185145758_185145900_185146554
transcript_74332.known	chr4	+	4415	4	FSM	ENSG00000151729.11	ENST00000281456.11	4415	4	0	0	0	0	multi-exon	FALSE	canonical	3	1716	junction_3	60.8604962188118	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCACAAATTCTTT	0	True	NA	1	True	AATAAA	-14	NA	185143265	185150382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185143484_185144763_185145251_185145758_185145900_185146813
transcript_74337.known	chr4	-	4851	5	FSM	ENSG00000164323.15	ENST00000458385.7	4851	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	18.7266521300525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	-28	True	NA	-3	True	AATAAA	-15	NA	185204000	185159664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203897
transcript_74338.known	chr4	-	903	3	NNC	ENSG00000164323.15	novel	4851	5	NA	NA	35	-233	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	121	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGATCAAAAAGTGAAAA	7	True	NA	NA	False	NA	NA	NA	185203965	185190375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_-_185191048_185191049_185191213_185203897
transcript_74340.known	chr4	-	2895	4	FSM	ENSG00000164323.15	ENST00000514798.1	2895	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.624301955378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTGTAAGTAGCTCAA	6622	False	NA	NA	False	AATAAA	-22	NA	185204028	185169025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185170341_185175785_185176052_185190142_185191213_185203784
transcript_74345.known	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	22.1825633257854	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	1	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_74346.known	chr4	-	2348	12	FSM	ENSG00000109775.11	ENST00000514247.5	2348	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	64.2965752336535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAACTTAAGTCTT	-14	True	NA	NA	False	CATAAA	-31	NA	185425979	185399539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418611_185418771_185422484_185422564_185425865
transcript_74350.known	chr4	-	1672	12	FSM	ENSG00000109775.11	ENST00000510755.5	1672	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	66.0740881432876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTAATTTTTCACATTA	-4	True	NA	-50	True	AATAAA	-5	NA	185425969	185400333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185400479_185403493_185403619_185405779_185405960_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_74352.nic	chr4	-	1526	12	NIC	ENSG00000109775.11	novel	592	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	64.8809462791862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGTGTTCATTCCATTC	NA	False	NA	1	True	AATATA	-23	NA	185425988	185402261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_185402345_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_74358.known	chr4	+	784	5	FSM	ENSG00000186352.9	ENST00000335174.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.33012701892219	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTCCGTGCAGTATT	-2	True	NA	12	True	ATTAAA	-16	NA	185396840	185400241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185396951_185397149_185397303_185398936_185399029_185399569_185399774_185400016
transcript_74360.known	chr4	+	1333	8	FSM	ENSG00000205129.9	ENST00000378850.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	4.23300925429402	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	2	True	NA	7	True	AATAAA	-17	NA	185426253	185449826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185426397_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_74361.known	chr4	-	2658	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	10.3708994574027	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGTATCCAAAATACAT	-1	True	NA	NA	False	AATAAA	-24	NA	185535507	185500659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_74364.known	chr4	-	705	5	FSM	ENSG00000168491.10	ENST00000507501.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.78535710713571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATCCAAAATTACTGTG	2	True	NA	NA	False	NA	NA	NA	185471103	185459925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185462993_185463050_185470944
transcript_74365.known	chr4	-	544	4	FSM	ENSG00000168491.10	ENST00000506962.3	544	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTTCAGAAAATTCTGA	1	True	NA	NA	False	NA	NA	NA	185471104	185460031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185470944
transcript_74366.known	chr4	+	394	2	FSM	ENSG00000249679.3	ENST00000512874.2	530	2	101	35	21	-35	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGGAAGCGACGGTGG	7	False	NA	7	True	ATTAAA	-15	NA	185471515	185472263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_185471761_185472114
transcript_74367.known	chr4	-	2819	5	FSM	ENSG00000154553.16	ENST00000504011.5	2819	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	21.8460522749535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATAAGAGTGCCCCCA	146	False	NA	NA	False	NA	NA	NA	185535491	185512093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185514338_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_74371.nic	chr4	-	4427	21	NIC	ENSG00000154556.18	novel	4622	24	NA	NA	35	-79	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	29.3540457177541	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTTCTTCTTGAC	8	True	NA	-20	True	AATAAA	-18	NA	185775487	185585522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_185587689_185589678_185589786_185593885_185593936_185611779_185611981_185614830_185614960_185615044_185615160_185618584_185618632_185620062_185620152_185626831_185627020_185630548_185630599_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226
transcript_74395.known	chr4	-	780	6	FSM	ENSG00000154556.18	ENST00000492810.5	780	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	54.1501615879399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCCTCAGGATTTTCTT	5499	False	185656762	NA	False	NA	NA	NA	185656743	185645837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185656614
transcript_74396.known	chr4	-	1031	5	FSM	ENSG00000154556.18	ENST00000466289.5	1031	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	52.2846774877688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTGGCTTTTTAATAT	-19	True	NA	NA	False	AATATA	-32	NA	185656734	185646173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185656614
transcript_74397.known	chr4	-	658	4	FSM	ENSG00000154556.18	ENST00000485380.5	658	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	55.4035698809703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTGTATTTATATA	35	True	NA	NA	False	AATATA	-39	NA	185656680	185646447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_185646783_185649466_185649657_185652661_185652729_185656614
transcript_74407.nnic	chr4	+	1806	11	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8835	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.1875431034317	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	186242196	186258471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186242367_186244748_186244807_186250242_186250403_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_74408.nnic	chr4	+	1777	11	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8775	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.1875431034317	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	-9	True	NA	20	True	AATAAA	-15	NA	186242256	186258471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186242367_186244748_186244807_186250242_186250434_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_74413.nnic	chr4	+	1726	10	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8813	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.5230108301749	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	186242218	186258471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186242367_186250242_186250403_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_74415.nnic	chr4	+	1757	10	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-8813	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.5230108301749	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	186242218	186258471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186242367_186250242_186250434_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_7442.known	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	481.97359181793	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	-3	True	NA	-43	True	GGGGCT	-32	NA	155308793	155320609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_74422.nnic	chr4	+	1459	9	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-528	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	34.7290854328184	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	-5	True	NA	20	True	AATAAA	-15	NA	186250503	186258471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr4_+_186250545_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_74435.nnic	chr4	-	750	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_2	78.5	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTAGTGGTCT	NA	False	NA	-5	True	ATTAAA	-18	NA	186247322	186241997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242333_186245315_186245479_186247070
transcript_74437.nnic	chr4	-	540	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_2	71	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTAGTGGTCT	NA	False	NA	-5	True	ATTAAA	-18	NA	186247326	186241997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242333_186245315_186245479_186247284
transcript_74441.nnic	chr4	-	378	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	145	junction_1	0	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	NA	False	NA	-7	True	ATTAAA	-16	NA	186247332	186241999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242330_186247284
transcript_74443.nnic	chr4	-	631	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	540	junction_1	0	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	NA	False	NA	-7	True	ATTAAA	-16	NA	186247368	186241999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr4_-_186242333_186247070
transcript_74448.known	chr4	+	2647	4	FSM	ENSG00000179059.10	ENST00000326866.5	2647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	244.965303665642	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGCCAAGTCTGTAT	-6	True	NA	38	True	ATTAAA	-16	NA	187995770	188005046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_187995841_187999107_187999274_187999608_187999686_188002712
transcript_74452.known	chr4	+	2480	3	FSM	ENSG00000179059.10	ENST00000509524.5	2480	3	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	83.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	-6	True	NA	37	True	ATTAAA	-15	NA	187995770	188005045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_187995841_187999608_187999686_188002712
transcript_74459.nic	chr4	-	2027	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	30.8888725754048	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	NA	False	NA	-24	True	AATAAA	-14	NA	188109635	188091271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
transcript_74460.known	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	31.1985085985774	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	3	True	NA	-24	True	AATAAA	-14	NA	188109603	188091271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
transcript_74464.known	chr4	+	1139	6	FSM	ENSG00000249378.7	ENST00000667802.1	1139	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	10.2097992144802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTTCTCATCACTGTAA	2	True	NA	NA	False	AATAAA	-20	NA	188455580	188486620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188486095
transcript_74465.known	chr4	+	750	6	FSM	ENSG00000249378.7	ENST00000667271.1	750	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	9.74474217206387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGATAAGGTTTGATG	2	True	NA	7	True	ATTAAA	-20	NA	188455580	188601903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188601767
transcript_74467.known	chr4	+	1198	5	FSM	ENSG00000249378.7	ENST00000655286.1	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	9.06917857360853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCAAACCTGATTTCTC	1336	False	NA	NA	False	AATAAA	-15	NA	188455551	188486420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778
transcript_74468.known	chr4	+	468	5	FSM	ENSG00000249378.7	ENST00000510005.6	526	5	56	2	12	-2	multi-exon	FALSE	canonical	1	4	junction_4	11.2805141726785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGTTTGATGTGCTA	14	False	NA	12	True	ATTAAA	-25	NA	188455592	188601908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188601767
transcript_74470.known	chr4	+	443	4	FSM	ENSG00000249378.7	ENST00000503458.7	464	4	15	6	0	-2	multi-exon	FALSE	canonical	1	4	junction_3	12.657891697365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGTTTGATGTGCTA	1343	False	NA	12	True	ATTAAA	-25	NA	188455558	188601908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_188455675_188456663_188456763_188485778_188485866_188601767
transcript_74472.known	chr4	+	978	9	FSM	ENSG00000109536.12	ENST00000226798.9	978	9	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_8	47.4893080071715	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTACAGAGTTCTTGA	-34	True	NA	42	True	AATAAA	-15	NA	189940871	189963192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092
transcript_74480.nic	chr5	+	2761	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-11	32856	-11	0	5prime_fragment	TRUE	canonical	3	161	junction_3	33.1246132052889	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	4	True	NA	18	True	AATAAA	-29	NA	92156	157110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_74485.nnic	chr5	+	1012	6	NIC	ENSG00000153404.15	novel	12591	20	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	89.3053189905282	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	4	True	NA	18	True	AATAAA	-29	NA	92156	157110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_92277_113250_113449_154874_154992_155344_155444_156070_156211_156772
transcript_74486.known	chr5	-	9283	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	20.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTACTTCTTTT	-4	True	NA	NA	False	NA	NA	NA	218153	196867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_205959_216728_216860_218092
transcript_7449.known	chr1	+	1198	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	649.315365938959	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	75	False	NA	-15	True	NA	NA	NA	155308969	155320637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_74490.known	chr5	+	2693	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	49.6243028018674	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	-2	True	NA	NA	False	NA	NA	NA	218319	257082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_74495.known	chr5	+	2067	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_11	136.606770411361	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	0	True	NA	NA	False	AATAAA	-16	NA	218302	256682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
transcript_74506.known	chr5	+	1088	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	262.262921511982	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	-5	True	NA	19	True	AATAAA	-13	NA	271656	314969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
transcript_74507.known	chr5	+	1110	6	FSM	ENSG00000249915.9	ENST00000264933.9	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_4	100.246895213767	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-16	True	NA	24	True	AATAAA	-18	NA	271645	314974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306761_311292_311403_314416
transcript_74509.known	chr5	+	1073	5	NIC	ENSG00000249915.9	novel	1050	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	297.619303809414	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-3	True	NA	24	True	AATAAA	-18	NA	271620	314974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
transcript_74511.known	chr5	+	931	4	FSM	ENSG00000249915.9	ENST00000618970.4	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	347.39059029027	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-3	True	NA	24	True	AATAAA	-18	NA	271620	314974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_311292_311403_314416
transcript_74512.known	chr5	-	522	2	FSM	ENSG00000248925.2	ENST00000512642.2	1075	2	0	553	0	-553	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGTCTCTTCATAAAGT	NA	False	NA	NA	False	NA	NA	NA	271516	269857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_270208_271344
transcript_74513.known	chr5	+	2148	14	FSM	ENSG00000073578.18	ENST00000510361.5	2148	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	142.908792860772	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTCTTTTATTTCCAA	-4	True	NA	NA	False	AATAAA	-13	NA	218317	256679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_74514.known	chr5	+	1430	9	FSM	ENSG00000073578.18	ENST00000504824.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	47.5703426516984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTAGTAAATTGTCAG	20	False	NA	NA	False	TTTAAA	-41	NA	218370	235524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143
transcript_74515.known	chr5	+	1156	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-5	True	NA	13	True	AATAAA	-14	NA	271656	276940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_271822_272710_272773_276011
transcript_74516.known	chr5	-	1663	1	FSM	ENSG00000221990.5	ENST00000623673.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTTATTGGCTGGGCGC	NA	False	NA	NA	False	NA	NA	NA	443160	441497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_441500_443200
transcript_74517.nnic	chr5	+	2774	14	NNC	ENSG00000180104.16	novel	2801	13	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.5265832485168	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	0	True	NA	6	True	ATTAAA	-19	NA	443158	467285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_443221_443259_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_74518.nnic	chr5	+	2756	14	NNC	ENSG00000180104.16	novel	2801	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.5265832485168	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	-7	True	NA	6	True	ATTAAA	-19	NA	443175	467285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_443232_443271_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_74520.nnic	chr5	+	2429	11	NNC	ENSG00000180104.16	novel	2801	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.7275963185019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	0	True	NA	6	True	ATTAAA	-19	NA	443158	467285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_443221_443259_443291_446149_446350_447532_447753_453369_454052_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_74522.known	chr5	+	2801	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	31.1884950297738	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	-7	True	NA	11	True	ATTAAA	-24	NA	443175	467290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_74523.known	chr5	+	2682	12	FSM	ENSG00000180104.16	ENST00000315013.9	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_6	24.0794140671691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	-3	True	NA	6	True	ATTAAA	-19	NA	446148	467285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_74524.known	chr5	+	2366	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	15.0453858828425	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	-6	True	NA	17	True	AATAAA	-21	NA	612339	653553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
transcript_74527.nic	chr5	-	2511	16	NIC	ENSG00000028310.18	novel	2665	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	78.7152392417687	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-2	True	NA	-20	True	CATAAA	-17	NA	892550	863740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892508
transcript_7453.nnic	chr1	+	1303	10	NIC	ENSG00000160752.15	novel	1478	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	99	junction_1	702.720761850539	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	19	True	NA	13	True	AATAAA	-16	NA	155308913	155320665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_155309077_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_74532.known	chr5	+	2431	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	30.7411911502032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTGATTTATGGT	-4	True	NA	88	True	ACTAAA	-23	NA	892883	918120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
transcript_74533.known	chr5	-	2492	17	FSM	ENSG00000049656.14	ENST00000320895.10	2492	17	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_14	76.2757128776913	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAAGCCTTTGAGTCA	-5	True	NA	-16	True	ATTAAA	-20	NA	1345099	1317751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
transcript_74535.known	chr5	-	3945	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_2	75.8339824841626	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGTTTTGTGTGGTT	-14	True	NA	-4	True	AGTAAA	-23	NA	1523960	1461426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
transcript_74538.nic	chr5	-	1347	8	FSM	ENSG00000185986.13	ENST00000689786.1	1332	8	-16	1	-13	-1	multi-exon	FALSE	canonical	3	16	junction_4	23.0279333481256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	174	False	NA	NA	False	AATAAA	-16	NA	1594517	1571956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_74540.nnic	chr5	-	1139	7	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	-13	-1	combination_of_known_splicesites	TRUE	canonical	3	23	junction_3	19.6694913225759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	174	False	NA	NA	False	AATAAA	-16	NA	1594517	1571956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_1572287_1574181_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_74542.nic	chr5	-	2017	4	ISM	ENSG00000185986.13	ENST00000689786.1	1332	8	-16	11575	-13	4549	5prime_fragment	FALSE	canonical	3	51	junction_1	13.0724477007517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAAAAAGGAAAACGTTG	174	False	NA	NA	False	AAAAAG	-31	NA	1594517	1583530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_1585134_1589246_1589366_1593112_1593285_1594394
transcript_74544.known	chr5	-	736	3	FSM	ENSG00000185986.13	ENST00000436493.2	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCAGTCTCTGCTAGT	71	False	NA	NA	False	NA	NA	NA	1594620	1589027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1589366_1593112_1593285_1594394
transcript_74546.nic	chr5	-	649	4	ISM	ENSG00000188002.11	ENST00000692393.1	835	5	1087	0	1046	0	3prime_fragment	FALSE	canonical	3	39	junction_1	8.73053390247253	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	1108	False	NA	2	True	ATTAAA	-20	NA	1632897	1598919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_1599270_1599626_1599828_1602690_1602736_1632844
transcript_74548.known	chr5	-	609	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-5	True	NA	-9	True	ATTAAA	-17	NA	1799837	1798384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1798948_1799791
transcript_74549.known	chr5	-	686	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTAGTTCATTCATTCT	1764	False	NA	-11	True	ATTAAA	-15	NA	1799895	1798386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1798948_1799770
transcript_74550.known	chr5	-	587	2	FSM	ENSG00000171421.13	ENST00000382647.7	587	2	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTAGTTCATTCAT	-6	True	NA	-14	True	ATTAAA	-12	NA	1799838	1798389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_1798948_1799809
transcript_74556.known	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2761	junction_3	121.658903861941	1857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1	True	NA	30	True	AATAAA	-22	NA	1801406	1816048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
transcript_74563.known	chr5	-	2630	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	44.1665880502445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATATTTATTTCT	-3	True	NA	-9	True	AATAAA	-17	NA	2751662	2745844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
transcript_74564.known	chr5	-	3079	4	FSM	ENSG00000170561.13	ENST00000302057.6	3079	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	24.9131825880731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTGGGGCTTATT	5	True	NA	77	True	AATAAA	-21	NA	2751677	2746164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_2747617_2748344_2749053_2749381_2749788_2751164
transcript_74566.known	chr5	-	1633	4	FSM	ENSG00000250579.3	ENST00000512155.3	1684	4	34	17	34	0	multi-exon	TRUE	canonical	3	27	junction_3	18.006171781426	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-16	False	NA	-39	True	AATAAA	-4	NA	5140119	5132100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139955
transcript_74568.known	chr5	+	7930	19	FSM	ENSG00000164151.12	ENST00000296564.9	7930	19	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_9	37.5629923603236	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTCTGATTATTA	-20	True	NA	18	True	AATAAA	-21	NA	5422676	5490220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426_5447510_5447720_5447761_5447840_5447898_5454551_5454639_5457331_5457742_5460435_5465227_5466333_5466503_5468827_5468989_5473557_5473749_5475972_5476080_5486720_5486820_5489148
transcript_74569.known	chr5	-	1101	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_3	33.6386021641143	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTTCCCAGAGGGT	-6	True	NA	44	True	AATATA	-27	NA	6378547	6371873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
transcript_74572.known	chr5	-	648	2	FSM	ENSG00000133398.4	ENST00000504058.1	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAGTCCTATGAGGGC	21	False	6378592	NA	False	NA	NA	NA	6378571	6376811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_6377250_6378361
transcript_74573.known	chr5	-	3056	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_5	61.6397588942657	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTGATTCCTGTTT	2	True	NA	NA	False	AATAAA	-15	NA	6633044	6599238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_74574.known	chr5	-	2619	18	FSM	ENSG00000037474.15	ENST00000506139.5	2619	18	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_16	172.021624938165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAGTATTTTTTAAA	4	True	NA	NA	False	NA	NA	NA	6633042	6599568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6632598_6632757_6632883
transcript_74582.nnic	chr5	+	885	4	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	13.1993265821489	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	NA	False	NA	3	True	AATAAA	-19	NA	7262686	7273901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr5_+_7262745_7264030_7264177_7266032_7266135_7273322
transcript_74584.nnic	chr5	+	1062	3	NNC	ENSG00000285689.1	novel	536	3	NA	NA	-6760	-3022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	1423	False	NA	3	True	AATAAA	-19	NA	7266031	7273901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_7266135_7272540_7272921_7273322
transcript_74586.known	chr5	+	3245	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	40.2307756092578	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	-19	True	NA	6	True	AATAAA	-19	NA	7869147	7901113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_74588.nic	chr5	+	3270	15	NIC	ENSG00000124275.15	novel	3274	15	NA	NA	-16	0	intron_retention	FALSE	canonical	3	25	junction_8	64.343307534582	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	17	True	AATAAA	-30	NA	7869131	7901124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7890260_7890413_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_74589.known	chr5	+	3274	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	55.651246387568	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	17	True	AATAAA	-30	NA	7869103	7901124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_74593.nic	chr5	+	3118	14	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	141	junction_2	29.4578226216648	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	17	True	AATAAA	-30	NA	7869131	7901124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_74595.known	chr5	+	3076	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	51.1485827251636	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-19	True	NA	17	True	AATAAA	-30	NA	7869147	7901124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_74596.nic	chr5	+	3029	13	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	21	junction_6	56.4306358874917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	17	True	AATAAA	-30	NA	7869131	7901124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_74600.nic	chr5	-	2394	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	-46	0	intron_retention	FALSE	canonical	3	18	junction_6	29.2617497767991	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	NA	False	NA	-13	True	AATAAA	-16	NA	7869083	7859158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
transcript_74601.known	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	19.4028921097403	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-4	True	NA	-13	True	AATAAA	-16	NA	7869031	7859158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
transcript_74603.nic	chr5	-	2587	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	-29	0	intron_retention	FALSE	canonical	2	7	junction_3	33.3449979590476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	NA	False	NA	-13	True	AATAAA	-16	NA	7869066	7859158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_7859540_7861148_7861264_7861582_7861774_7862822_7862998_7865897_7865984_7866645_7868197_7868978
transcript_74606.known	chr5	-	637	6	FSM	ENSG00000124279.12	ENST00000282110.8	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	35.1533782160406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAGAAAAATATAAT	17	True	NA	NA	False	NA	NA	NA	7869010	7859380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7868978
transcript_74608.known	chr5	+	546	4	FSM	ENSG00000124275.15	ENST00000510279.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	23.0120741254576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGGTTTTGAAGCAA	-19	True	NA	NA	False	AAGAAA	-3	NA	7869147	7878149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943
transcript_74610.nic	chr5	+	2500	3	ISM	ENSG00000124275.15	ENST00000510279.5	546	4	-16	630	-16	-446	5prime_fragment	FALSE	canonical	3	141	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGCATTTGATGGATG	NA	False	NA	NA	False	AGTAAA	-27	NA	7869131	7877519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_7869216_7870769_7870924_7875257
transcript_74611.known	chr5	+	1799	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	4	116	4	-116	multi-exon	FALSE	canonical	3	44	junction_2	33	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATGTCCTCTCTATTC	-6	True	NA	NA	False	AAAAAG	-19	NA	9546199	9550609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_9546531_9548989_9549150_9549301
transcript_74612.known	chr5	+	842	2	FSM	ENSG00000250786.3	ENST00000655411.1	436	2	5	-411	5	411	multi-exon	FALSE	canonical	3	110	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTTAGGGTTCT	-20	True	NA	NA	False	NA	NA	NA	9546289	9549590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_9546531_9548989
transcript_74614.nnic	chr5	+	573	5	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_2	1.22474487139159	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTGAATTCTTTA	NA	False	NA	6	True	AATAAA	-16	NA	9836136	9857607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr5_+_9836213_9847595_9847706_9848914_9848961_9851021_9851147_9857391
transcript_74616.known	chr5	-	441	1	FSM	ENSG00000272417.1	ENST00000607861.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTAGATATTTATTTTTG	5449	False	NA	NA	False	AATAAA	-25	NA	10204040	10203599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10203600_10204000
transcript_74619.known	chr5	-	2651	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.9642400437689	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCCAGCCTCAGGTATGT	3	True	NA	-3	True	ATTAAA	-18	NA	10249888	10225506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
transcript_74620.known	chr5	-	534	5	FSM	ENSG00000150756.14	ENST00000510052.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	20.3515969889343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCCCACATTGGACTC	3	True	NA	NA	False	NA	NA	NA	10249888	10227579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10227648_10235210_10235262_10236521_10236616_10239066_10239357_10249857
transcript_74621.nnic	chr5	-	1847	5	NNC	ENSG00000150756.14	novel	2651	5	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.9815263346293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCAGTTTGATCATTTT	-6	True	NA	-32	True	TATAAA	-3	NA	10249897	10226335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_10227664_10235210_10235262_10236477_10236616_10239066_10239357_10249857
transcript_74622.known	chr5	-	1160	4	FSM	ENSG00000150756.14	ENST00000510047.5	1160	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	23.3666428910958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAATAATTTGTTCC	-6	True	NA	NA	False	NA	NA	NA	10249897	10226955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10227648_10236477_10236616_10239066_10239357_10249857
transcript_74626.known	chr5	-	789	3	FSM	ENSG00000150756.14	ENST00000508553.1	789	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGCCTGTGTGAG	3	True	NA	NA	False	TATAAA	-28	NA	10249888	10236147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10236616_10239066_10239357_10249857
transcript_74637.known	chr5	+	3293	11	FSM	ENSG00000150753.12	ENST00000280326.9	3293	11	0	0	0	0	multi-exon	FALSE	canonical	3	3536	junction_5	310.449367852473	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTTTTCACGTT	-26	True	NA	21	True	AATAAA	-15	NA	10250279	10266389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10250446_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_74642.known	chr5	+	1997	11	FSM	ENSG00000150753.12	ENST00000515676.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	2	152	junction_1	1147.78449196702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCTGTTTGGTAAC	231	False	NA	-3	True	NA	NA	NA	10250536	10264902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10250894_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_74651.known	chr5	+	1728	10	FSM	ENSG00000150753.12	ENST00000515390.5	1728	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_2	1175.56161519127	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTTGTTCAAAGCT	5	False	NA	20	True	AATAAA	-21	NA	10250215	10264925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10250446_10254144_10254206_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_74659.known	chr5	-	430	1	FSM	ENSG00000271715.1	ENST00000607847.1	430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGAGTGGTCCATTCA	NA	False	NA	NA	False	TATAAA	-19	NA	10269918	10269488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10269500_10269900
transcript_74660.known	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	19.9659710507654	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-29	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
transcript_74661.known	chr5	-	901	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGCTTGACTAATGTTA	12	True	NA	1	True	AATAAA	-29	NA	10353601	10352700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10352700_10353600
transcript_74663.known	chr5	+	9641	26	FSM	ENSG00000145495.16	ENST00000274140.10	9641	26	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_11	36.2933382316921	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGATGCTT	-29	True	NA	NA	False	AATAAA	-17	NA	10353694	10440388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_74667.known	chr5	+	4734	25	FSM	ENSG00000145495.16	ENST00000511802.5	4734	25	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	33.0213525195777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACTGCCTGATTTTT	-9	True	NA	12	True	NA	NA	NA	10353714	10434285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_74668.known	chr5	+	3062	25	FSM	ENSG00000145495.16	ENST00000449913.6	3062	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	54.8661091253568	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTATATTAATTTATT	-21	True	NA	-10	True	ATTAAA	-28	NA	10353702	10433961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_74674.known	chr5	-	2301	4	FSM	ENSG00000112977.16	ENST00000230895.11	2301	4	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_1	25.4863798048204	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTTTTTCTTATAGA	-33	True	NA	-2	True	AATAAA	-20	NA	10761234	10679229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_10681170_10683528_10683572_10748174_10748272_10761013
transcript_74680.known	chr5	+	4949	30	FSM	ENSG00000038382.21	ENST00000509967.6	4949	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.3915074450194	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGTTCTTATTATAATT	65	False	NA	NA	False	AATAAA	-16	NA	14183797	14399400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_14183960_14270824_14270900_14280321_14280437_14286870_14287064_14290715_14291229_14293011_14293135_14297071_14297264_14304460_14304593_14316512_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731_14387848_14388612_14388680_14389288_14389399_14390230_14390301_14390900_14390991_14394037_14394131_14397042_14397155_14398879
transcript_74684.known	chr5	-	1707	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	30.0798936168332	555	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTCAGATGTCGTTT	0	True	NA	-9	True	AATAAA	-14	NA	16465800	16451518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
transcript_74686.nic	chr5	-	1099	7	ISM	ENSG00000145555.15	ENST00000515803.5	4839	23	-109	35375	-109	1222	5prime_fragment	FALSE	canonical	0	0	junction_5	144.768109594467	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAGGAAAATAAGCAGGT	6260	False	NA	1	True	NA	NA	NA	16738523	16701754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_74688.nic	chr5	-	917	5	ISM	ENSG00000145555.15	ENST00000515803.5	4839	23	-109	36597	-109	0	5prime_fragment	FALSE	canonical	0	0	junction_3	165.348873597615	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	6260	False	NA	9	True	NA	NA	NA	16738523	16702976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_74689.nic	chr5	-	971	5	ISM	ENSG00000145555.15	ENST00000505695.5	4803	23	-17	36415	-17	0	5prime_fragment	FALSE	canonical	0	0	junction_3	173.676963066493	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	2	True	NA	9	True	NA	NA	NA	16742245	16702976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_74700.known	chr5	-	638	3	FSM	ENSG00000248605.5	ENST00000507887.5	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAACTCTATTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	25445925	25413438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_25413845_25422729_25422856_25445819
transcript_74705.known	chr5	-	369	3	FSM	ENSG00000248605.5	ENST00000507926.1	369	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	55.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTATCTAGGCAACTTGA	NA	False	NA	NA	False	NA	NA	NA	25445907	25415645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_25415801_25422729_25422856_25445819
transcript_74708.nnic	chr5	-	534	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	-18170	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	42	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATTATAGA	NA	False	NA	NA	False	NA	NA	NA	25445925	25433815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25435241_25435274_25445819
transcript_74709.nnic	chr5	-	1220	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	665	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATAAATGAGTGTATGT	NA	False	NA	-35	True	AGTAAA	-20	NA	25445968	25412773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_25413845_25445819
transcript_74710.nnic	chr5	-	928	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	373	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAGAGAGATGATTGAC	NA	False	NA	-7	True	AATAAA	-14	NA	25445968	25413065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_25413845_25445819
transcript_74711.nnic	chr5	-	775	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	220	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATTTATGTGTGCCAAA	NA	False	NA	-17	True	AGTAAA	-4	NA	25445968	25413218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_25413845_25445819
transcript_74712.nnic	chr5	-	712	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	157	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTGATATTTTAAACAA	NA	False	NA	-23	True	AATAAA	-16	NA	25445968	25413281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_25413845_25445819
transcript_74713.nnic	chr5	-	2562	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-38	-16148	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGTGAATGCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	25445963	25431793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25445819
transcript_74715.nnic	chr5	-	1163	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-38	-17547	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCATTGATTAAATTAAT	NA	False	NA	0	True	AATAAA	-24	NA	25445963	25433192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25445819
transcript_74716.nnic	chr5	-	617	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-38	-18093	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAGATTGGATATGAAG	NA	False	NA	NA	False	AATAAA	-15	NA	25445963	25433738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25445819
transcript_74717.nnic	chr5	-	541	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-38	-18169	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAATTATAGAA	NA	False	NA	NA	False	NA	NA	NA	25445963	25433814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_25434212_25445819
transcript_74720.known	chr5	-	3082	12	FSM	ENSG00000113100.10	ENST00000231021.9	3082	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.04898684901539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTTATTTAATTCCT	-2	True	NA	NA	False	AATAAA	-20	NA	27038586	26880596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_26881624_26885613_26885866_26885965_26886084_26889835_26889958_26890427_26890565_26902475_26902730_26903636_26903825_26905958_26906127_26906718_26906839_26915629_26915925_26988105_26988383_27038462
transcript_74721.nic	chr5	-	1438	2	ISM	ENSG00000113100.10	ENST00000505045.1	1801	6	-32	84093	-32	-71193	5prime_fragment	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATACAAGTG	-6	True	NA	NA	False	CATAAA	-33	NA	27038618	26987100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_26988383_27038462
transcript_74722.known	chr5	+	971	4	FSM	ENSG00000250337.8	ENST00000659077.1	971	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	21.2289111041209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	-18	True	NA	NA	False	AATAAA	-26	NA	27472269	27496404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27495948
transcript_74723.nic	chr5	+	956	3	ISM	ENSG00000250337.8	ENST00000659860.1	1325	4	-9	7502	0	157	5prime_fragment	FALSE	canonical	3	15	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACATAATAAAACACCT	-17	True	NA	NA	False	AAAAAG	-17	NA	27472270	27478184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_27472520_27475534_27475696_27477638
transcript_74725.nic	chr5	+	2882	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-30	-140	0	140	multi-exon	FALSE	canonical	3	49	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAGAAAAAAAAGAA	-17	True	NA	NA	False	NA	NA	NA	27472270	27478167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534
transcript_74726.known	chr5	+	1325	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	14.3836326735943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	-8	True	NA	NA	False	AATAAA	-28	NA	27472279	27485686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
transcript_74730.known	chr5	-	5305	35	FSM	ENSG00000113360.17	ENST00000511367.6	5305	35	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_34	66.6489343487725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTTTCATTCATCAT	22	True	NA	NA	False	AATAAA	-22	NA	31532061	31400496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
transcript_74732.known	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_29	73.0224701161808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-26	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_74738.known	chr5	-	5416	36	FSM	ENSG00000113360.17	ENST00000344624.8	5416	36	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_30	68.6537363164168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-10	True	NA	NA	False	AATAAA	-25	NA	31532093	31400493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_74743.nic	chr5	+	3257	9	NIC	ENSG00000082213.18	novel	3572	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	81.0708602088321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	-46	True	NA	25	True	AATAAA	-18	NA	31532278	31554808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_74745.nic	chr5	+	3033	9	NIC	ENSG00000082213.18	novel	3117	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	112.183722081236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	-46	True	NA	25	True	AATAAA	-18	NA	31532278	31554808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_74746.known	chr5	+	3572	9	FSM	ENSG00000082213.18	ENST00000325366.14	3572	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	25.7678942678675	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTAAGTGTAAGCGT	-24	True	NA	NA	False	ATTAAA	-30	NA	31532300	31555053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_7475.known	chr1	+	1196	9	FSM	ENSG00000160752.15	ENST00000611010.4	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	761.648376877414	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTCTGTTCTTGCTC	3936	False	NA	14	True	AATAAA	-17	NA	155308747	155320666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_74750.known	chr5	+	3117	9	FSM	ENSG00000082213.18	ENST00000510659.5	3117	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	90.960156112443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	-38	True	NA	25	True	AATAAA	-18	NA	31532286	31554808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_74757.known	chr5	-	1074	4	FSM	ENSG00000113384.14	ENST00000503610.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	386.207485973825	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGAATGCTTTTGCT	5	True	NA	NA	False	NA	NA	NA	32174302	32126366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173745
transcript_74758.known	chr5	-	2678	4	FSM	ENSG00000113384.14	ENST00000265070.7	2678	4	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_2	17.1075032271418	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCAAGCATGTCATTT	-12	True	NA	-17	True	AATAAA	-28	NA	32174319	32124715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173809
transcript_74759.known	chr5	+	802	1	FSM	ENSG00000272086.1	ENST00000606994.1	802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCTGTGGCTAAAGA	67	False	NA	23	True	AATAAA	-20	NA	32174470	32175272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32174500_32175300
transcript_74761.known	chr5	-	4717	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	0	0	0	multi-exon	TRUE	canonical	1	196	junction_12	110.843604728199	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTGCATCTTGTTA	4	True	NA	-12	True	AGTAAA	-17	NA	32444740	32354349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_74766.nic	chr5	-	1168	7	ISM	ENSG00000056097.16	ENST00000265069.13	4717	20	-12	49706	-12	2671	5prime_fragment	FALSE	canonical	3	497	junction_3	55.0799923343818	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGCATTGAAAGCCTC	-8	True	NA	NA	False	TATAAA	-34	NA	32444752	32404055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_74769.known	chr5	+	1658	6	FSM	ENSG00000113387.12	ENST00000511615.5	1658	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1989.4890399296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTATATGTAGCCAG	-6	True	NA	40	True	NA	NA	NA	32585558	32601988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32594570_32594873_32598960_32599070_32601004
transcript_74778.known	chr5	+	771	6	FSM	ENSG00000113387.12	ENST00000515355.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	2022.0275566866	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGCCCACCACCTAG	6	True	NA	-31	True	ATTAAA	-42	NA	32585570	32601282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32585626_32586368_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_74782.known	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3967	junction_4	143.147651046044	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	-8	True	NA	26	True	AATAAA	-14	NA	32585556	32604079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_74806.known	chr5	+	2672	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	0	0	0	0	multi-exon	FALSE	canonical	3	1294	junction_9	190.44275897089	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAAGACTGCTC	-11	True	NA	12	True	AATAAA	-16	NA	33440964	33468086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_74814.known	chr5	+	2481	18	FSM	ENSG00000113407.14	ENST00000508361.5	2481	18	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	407.182793091284	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTTCAAGACTGCT	-12	True	NA	11	True	AATAAA	-15	NA	33440963	33468085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_33441144_33445323_33445405_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_74824.nnic	chr5	-	947	4	NNC	ENSG00000151388.11	novel	1003	3	NA	NA	-737	-124	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	29.5334085777823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTCTCTTATCTCCTC	NA	False	NA	-27	True	ATTAAA	-17	NA	33892756	33751321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_33751549_33881118_33881481_33891729_33891842_33892510
transcript_74826.known	chr5	-	1003	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCGAGTCTCTGCATA	7	True	NA	-75	True	TATAAA	-15	NA	33892019	33751197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33751549_33881118_33881481_33891729
transcript_74829.known	chr5	-	1195	6	FSM	ENSG00000242110.8	ENST00000382085.7	1195	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	42.6051640062563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAGGACCCCCCAGCA	17	True	NA	-24	True	AATAAA	-1	NA	34008028	33988306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33988362_33989110_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_74830.known	chr5	-	4108	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	3.34477204006491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTTATTTACATTTT	-5	True	NA	NA	False	AGTAAA	-40	NA	34008050	33986164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_74837.known	chr5	-	2919	4	FSM	ENSG00000242110.8	ENST00000382072.6	2919	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	46.6761895045715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	14	True	NA	-2	True	AATAAA	-20	NA	34008031	33987173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_33989503_33998640_33998828_34005755_34005900_34007772
transcript_74839.known	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_10	92.5067658612266	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	11	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_74841.known	chr5	+	2941	17	FSM	ENSG00000039560.14	ENST00000512629.5	2941	17	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_10	160.232143603429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTCCTTGGCAGGAC	4	True	NA	-4	True	NA	NA	NA	34656438	34830765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_74847.known	chr5	+	550	3	FSM	ENSG00000039560.14	ENST00000514931.5	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_1	62.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCGATAAGAAATAGCAT	29	True	NA	NA	False	NA	NA	NA	34656410	34757868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34656476_34686871_34686956_34757467
transcript_74848.known	chr5	-	1565	2	FSM	ENSG00000272323.1	ENST00000606401.1	1565	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTCTTTTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34839278	34837548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34839018_34839182
transcript_74850.known	chr5	+	1591	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_9	58.1587864767177	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	-11	True	NA	NA	False	ATTAAA	-28	NA	34915710	34925996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_74855.known	chr5	+	743	8	FSM	ENSG00000113460.13	ENST00000506023.1	743	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	411.35103436042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTGTAACACCAGC	30	False	NA	64	True	AAGAAA	-37	NA	34915751	34925345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34915898_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_74858.nnic	chr5	-	1255	7	NNC	ENSG00000113456.19	novel	1328	7	NA	NA	-17	8194	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	105.63682543928	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTAACCTGTGTCACT	-2	True	NA	-26	True	ATTAAA	-20	NA	34915565	34897065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_34897382_34908893_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
transcript_74860.known	chr5	-	1328	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	142.057206786562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGAAGATAGGAGCAA	2523	False	NA	-112	True	NA	NA	NA	34915615	34908654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
transcript_74862.known	chr5	-	4512	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	59.030161781923	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGTGTATAGTATTTTT	3	True	NA	0	True	AATAAA	-21	NA	34915504	34905259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
transcript_74868.known	chr5	-	1153	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	109.984942151187	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCAGGACTGTCCTT	-6	True	NA	-11	True	AATAAA	-19	NA	34915548	34908553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
transcript_74874.known	chr5	-	1678	3	FSM	ENSG00000113456.19	ENST00000628399.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	174.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACGAAGATCGCTTGAGC	1369	False	NA	-117	True	NA	NA	NA	34916769	34913969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34914027_34914694_34914962_34915415
transcript_74875.known	chr5	-	664	4	FSM	ENSG00000113456.19	ENST00000511456.3	664	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	169.431074153736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTGGATATGACGAGT	-10	True	NA	22	True	AATAAA	-38	NA	34915517	34911617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_34911813_34913926_34914027_34914694_34914962_34915415
transcript_74876.known	chr5	+	6208	13	FSM	ENSG00000168724.17	ENST00000382021.2	6208	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	78.5550054986243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	-36	True	NA	8	True	AATAAA	-18	NA	34929592	34958964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
transcript_74878.known	chr5	+	6107	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_8	24.2330284822489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	13	True	NA	8	True	AATAAA	-18	NA	34929558	34958964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_7488.known	chr1	+	3436	10	FSM	ENSG00000160753.16	ENST00000368352.10	3436	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	129.945287632056	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	-31	True	NA	24	True	AATAAA	-15	NA	155320893	155331114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_74882.known	chr5	+	2338	12	FSM	ENSG00000168724.17	ENST00000642675.1	2338	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	77.9501854068268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	29	False	NA	-25	True	AAAAAG	-29	NA	34929976	34955168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_74885.known	chr5	+	3026	10	FSM	ENSG00000152582.14	ENST00000282469.10	3026	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.64341716741563	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACTGGTTCATCGAATG	-50	True	NA	NA	False	ATTAAA	-20	NA	35617843	35671575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_35618056_35628459_35628563_35641430_35641684_35644354_35644526_35646666_35646808_35649360_35649426_35654539_35654727_35659018_35659208_35667071_35667260_35670058
transcript_74887.known	chr5	-	665	5	FSM	ENSG00000152611.12	ENST00000513623.5	665	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.78535710713571	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTGACACTGATGTGTA	NA	False	NA	NA	False	NA	NA	NA	35938635	35904601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_35904647_35909865_35910076_35910365_35910544_35920983_35921121_35938540
transcript_74888.known	chr5	-	4918	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.04611904907235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAGTCTATTGAGTAA	5	True	NA	NA	False	AAAAAG	-14	NA	35991390	35951005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
transcript_74889.nic	chr5	-	1473	4	ISM	ENSG00000145626.12	ENST00000515801.5	5002	8	207	11988	-1	-2222	5prime_fragment	FALSE	canonical	3	12	junction_3	9.56846672960488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTTGTGTGATTAT	-3	True	NA	NA	False	ATTAAA	-20	NA	35991398	35965095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_35965918_35968018_35968134_35988449_35988552_35990964
transcript_74890.nic	chr5	-	1309	4	ISM	ENSG00000145626.12	ENST00000333811.5	1114	5	17	2222	17	-2222	5prime_fragment	FALSE	canonical	3	30	junction_1	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTTGTGTGATTAT	9608	False	NA	NA	False	ATTAAA	-20	NA	35991416	35965095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_35965918_35968018_35968134_35988449_35988552_35991146
transcript_74891.known	chr5	-	5002	8	FSM	ENSG00000145626.12	ENST00000515801.5	5002	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2330958285717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACTGTCAAATGCAT	9419	False	NA	-18	True	AATAAA	-16	NA	35991605	35953107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_35954479_35954818_35955865_35957187_35957420_35961988_35962952_35965385_35965918_35968018_35968134_35988449_35988552_35990964
transcript_74892.known	chr5	-	1114	5	FSM	ENSG00000145626.12	ENST00000333811.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.4272486205415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCAGAATCTGGAGGAAA	9591	False	NA	NA	False	NA	NA	NA	35991433	35962873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_35962952_35965385_35965918_35968018_35968134_35988449_35988552_35991146
transcript_74896.known	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	24.5181338785987	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	13	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
transcript_74899.known	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	77.0158425260673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	13	True	NA	-97	True	NA	NA	NA	36066882	36035336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
transcript_7490.known	chr1	+	2503	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	86.1560176366109	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	12	True	NA	24	True	AATAAA	-15	NA	155323936	155331114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_74900.known	chr5	-	1476	6	FSM	ENSG00000168671.10	ENST00000504685.5	1476	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	93.6448610442666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACACCCTGACTCTTCC	13	True	NA	-115	True	NA	NA	NA	36066882	36035354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36051869_36051985_36064248_36064351_36066695
transcript_74906.nic	chr5	-	1303	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	334	-727	-68	727	3prime_fragment	FALSE	canonical	3	212	junction_1	28.5228952870419	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTGTGTGATCAC	NA	False	NA	-5	True	ATTAAA	-20	NA	36066950	36048589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
transcript_74908.known	chr5	-	8116	18	FSM	ENSG00000164187.7	ENST00000296603.5	8116	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	6.27346805077407	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTATGTTTGAAAG	11	True	NA	1	True	AATAAA	-26	NA	36151887	36098406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
transcript_74912.known	chr5	-	1437	13	FSM	ENSG00000152620.13	ENST00000506945.5	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_12	50.1250519534228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACATTCACTGTA	NA	False	NA	NA	False	NA	NA	NA	36242279	36194985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36208624_36208691_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_74913.known	chr5	-	2507	12	FSM	ENSG00000152620.13	ENST00000282512.7	2507	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	35.2738987621768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGTATATC	28	False	NA	-7	True	AATAAA	-20	NA	36242142	36193712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_74921.known	chr5	+	3715	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_9	86.5778747432722	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACATATGTATACATGTG	-16	True	NA	NA	False	TTTAAA	-45	NA	36152110	36184319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_74922.known	chr5	+	1537	10	FSM	ENSG00000145604.17	ENST00000274254.9	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	162.959435988769	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGTATTCCTTTTTT	NA	False	NA	29	True	AATAAA	-30	NA	36151988	36184041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_74925.known	chr5	+	3299	9	FSM	ENSG00000145604.17	ENST00000620197.5	3299	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	236.944481893966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTTTTATAAAAATG	-43	True	NA	-1	True	TTTAAA	-8	NA	36152083	36184011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_74927.known	chr5	+	3294	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	227.784403274236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACACATTTTTATAA	-20	True	NA	-6	True	TTTAAA	-3	NA	36152106	36184006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_74928.nic	chr5	+	1319	9	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_2	261.491365775239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	-44	True	NA	17	True	AATAAA	-18	NA	36152082	36184029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_74930.known	chr5	+	1646	8	FSM	ENSG00000145604.17	ENST00000509692.5	1646	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	311.051409885628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCATCTTTTCTAGGAA	1	True	NA	NA	False	AAAAAG	-24	NA	36152127	36182514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_74936.known	chr5	+	3919	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	9.27095557555696	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	-7	True	NA	18	True	AATAAA	-23	NA	36606605	36688334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_74940.known	chr5	+	583	3	FSM	ENSG00000079215.15	ENST00000504121.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAAATGGTAGCCTAGG	-2	True	NA	67	True	NA	NA	NA	36606610	36608698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36607223_36607312_36608328
transcript_74943.known	chr5	+	1096	2	FSM	ENSG00000079215.15	ENST00000512374.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGTTTATTACTTATG	-2	True	NA	NA	False	AATAAA	-36	NA	36606610	36609299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_36606736_36608328
transcript_74945.nic	chr5	+	4006	12	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-36	63620	-15	64	5prime_fragment	FALSE	canonical	3	28	junction_1	8.0822220985065	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCATCAGTGTCAACG	-8	True	NA	10	True	NA	NA	NA	36876753	37000570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372
transcript_74950.nic	chr5	+	1494	9	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-36	88293	-15	0	5prime_fragment	FALSE	canonical	3	28	junction_1	5.23061898822692	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGCAAGGATGAAAAAGA	-8	True	NA	NA	False	AAGAAA	-26	NA	36876753	36975897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775
transcript_74951.known	chr5	+	426	2	FSM	ENSG00000286193.3	ENST00000651145.2	493	2	67	0	16	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCAGACACTATGCT	20	False	NA	NA	False	AATAAA	-17	NA	37249045	37250646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_37249222_37250396
transcript_74952.known	chr5	-	4200	35	FSM	ENSG00000113569.16	ENST00000381843.6	4200	35	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_34	58.295631250012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGGTGTTCTAAATCT	678	False	NA	-35	True	AATAAA	-18	NA	37370785	37291838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370665
transcript_74953.known	chr5	-	8068	35	FSM	ENSG00000113569.16	ENST00000231498.8	8068	35	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_17	38.2707527889267	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCTTCCATTAAAT	-11	True	NA	-7	True	AATAAA	-15	NA	37371106	37288136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_74955.known	chr5	-	4088	34	FSM	ENSG00000113569.16	ENST00000513532.1	4088	34	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	60.4658377848735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGATATACTTTCAT	14	True	NA	-96	True	TTTAAA	-34	NA	37371081	37291899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_74960.known	chr5	+	2877	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_11	19.1088667619861	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCTTTAGTGACTA	-9	True	NA	NA	False	ATTAAA	-16	NA	37379317	37753435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
transcript_74965.nnic	chr5	+	470	5	NNC	ENSG00000082068.9	novel	1526	12	NA	NA	-25	11798	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	101.0331010115	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTGGTCATTTGGAAGC	NA	False	NA	NA	False	ATTAAA	-20	NA	37379259	37393607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37393541
transcript_74966.known	chr5	+	365	3	FSM	ENSG00000082068.9	ENST00000505799.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGCCAAGGCGGGCA	0	True	NA	NA	False	NA	NA	NA	37379301	37381809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_37379393_37379488_37379555_37381601
transcript_74975.nnic	chr5	-	2052	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	14.522013940528	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTGTTTGGCTCAAA	NA	False	NA	-26	True	GATAAA	-15	NA	38341359	38313174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38314943_38316870_38317024_38325773_38325817_38341271
transcript_74977.nnic	chr5	-	1690	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	7.36357401145817	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGAGTATGCTTGAGCTT	NA	False	NA	-8	True	AATAAA	-22	NA	38341357	38323396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38324838_38325773_38325817_38336287_38336408_38341271
transcript_74980.nnic	chr5	-	1258	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	9	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGATTTGAAATTCAT	NA	False	NA	0	True	AATAAA	-34	NA	38341359	38297491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38298509_38316870_38317024_38341271
transcript_74983.nnic	chr5	-	908	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	6.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTCTCTTTTTTCCTC	NA	False	NA	-2	True	AATAAA	-21	NA	38341359	38311913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38312581_38316870_38317024_38341271
transcript_74985.nnic	chr5	-	2009	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTGTTTGGCTCAAA	NA	False	NA	-26	True	GATAAA	-15	NA	38341359	38313174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38314943_38316870_38317024_38341271
transcript_74987.nnic	chr5	-	649	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	22	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAAAAGATTCCCCTT	NA	False	NA	11	True	NA	NA	NA	38341359	38317445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38317964_38325773_38325817_38341271
transcript_7499.known	chr1	+	1968	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	77.5914782692017	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	5	True	NA	22	True	AATAAA	-13	NA	155324512	155331112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_74990.nnic	chr5	-	337	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	4	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCGCCAGTATCTTTAC	NA	False	NA	-9	True	AGTAAA	-29	NA	38341357	38325685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38325817_38336287_38336408_38341271
transcript_74992.nnic	chr5	-	217	2	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGCGCCAGTATCTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	38341359	38325687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_-_38325817_38341271
transcript_75.known	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV10001_+_0_9900
transcript_75023.nnic	chr5	-	944	3	NNC	ENSG00000248730.1	novel	1579	4	NA	NA	-50372	-3394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTAGTCTCTGGCAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	38341358	38285657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_38286362_38316870_38317024_38341271
transcript_75026.nic	chr5	-	1333	11	ISM	ENSG00000164327.13	ENST00000296782.9	7505	39	-10	31528	-10	-1861	5prime_fragment	FALSE	canonical	3	22	junction_3	4.12310562561766	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCTGGGCAT	-14	True	NA	NA	False	NA	NA	NA	39074409	38971547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
transcript_75031.known	chr5	-	4345	15	FSM	ENSG00000153071.15	ENST00000320816.11	4345	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	8.01783725737273	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTACCATCGGTTT	1	True	NA	-2	True	AATAAA	-43	NA	39424980	39371676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_75033.nnic	chr5	-	2529	5	NNC	ENSG00000113638.14	novel	5497	5	NA	NA	146	661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.447781166943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGATTTTCCTATTA	168	False	NA	-7	True	AATAAA	-16	NA	40755762	40714474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755693
transcript_75034.known	chr5	-	5497	5	FSM	ENSG00000113638.14	ENST00000337702.5	5497	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	20.8386659841747	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGTGGACATATGT	-31	True	NA	-12	True	AATAAA	-24	NA	40755961	40711575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755823
transcript_75035.known	chr5	-	784	4	FSM	ENSG00000113638.14	ENST00000511730.2	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	56.0971379741328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCATAGGATTAT	-19	True	NA	NA	False	NA	NA	NA	40755949	40716144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40716499_40730261_40730344_40746797_40747020_40755823
transcript_75037.known	chr5	-	1918	10	FSM	ENSG00000132356.12	ENST00000354209.7	1918	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	56.7145766966178	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATTTCTTTTGCA	8	True	NA	-8	True	AATAAA	-8	NA	40798374	40762769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40774927_40774973_40775409_40775504_40777444_40777587_40798062
transcript_75039.known	chr5	-	5088	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	-10	-9	10	multi-exon	FALSE	canonical	3	125	junction_1	12.9034879005639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTTATGTTTTTTA	215	False	NA	1	True	AATAAA	-26	NA	40798198	40759378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
transcript_75044.nic	chr5	-	1232	3	ISM	ENSG00000132356.12	ENST00000296800.4	1134	6	-31	6172	-16	2459	5prime_fragment	FALSE	canonical	3	142	junction_1	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTCTGCCTGGAGA	208	False	NA	NA	False	NA	NA	NA	40798205	40774556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_40775504_40777444_40777587_40798062
transcript_75045.known	chr5	-	668	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCCATTCATGTAT	254	False	NA	NA	False	AATAAA	-2	NA	40798159	40777015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40777587_40798062
transcript_75050.known	chr5	-	505	4	FSM	ENSG00000145592.14	ENST00000504562.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_3	5211.97367180184	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATCTGGTTTTGGTAA	2	True	NA	-33	True	AATAAA	-19	NA	40835186	40832457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835018
transcript_75051.known	chr5	-	7573	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	0	0	0	multi-exon	FALSE	canonical	3	8479	junction_3	1607.97104727942	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTTTTGCAGCAAATT	-5	True	NA	NA	False	AATAAA	-18	NA	40835222	40825261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
transcript_75053.known	chr5	-	7706	3	FSM	ENSG00000182836.10	ENST00000377801.8	7706	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTTTTATTTTAAT	-19	True	NA	-17	True	AATAAA	-17	NA	41510601	41306951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_41313771_41381825_41382535_41510423
transcript_75055.known	chr5	-	3294	17	FSM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	24.1828160839469	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTGACTGTCCTTT	-1	True	NA	-1	True	AATAAA	-18	NA	41870425	41730064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_41731771_41739389_41739492_41749526_41749608_41762110_41762201_41794002_41794079_41794676_41794750_41801021_41801071_41803068_41803164_41805566_41805682_41807330_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_75064.nic	chr5	-	1037	8	ISM	ENSG00000083720.13	ENST00000196371.10	3294	17	-148	77284	-148	-57748	5prime_fragment	FALSE	canonical	3	186	junction_2	23.1375655326033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGAAAAGAATTGAGGT	198	False	NA	NA	False	TATAAA	-11	NA	41870573	41807348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_75065.nic	chr5	-	2622	7	ISM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	108563	0	-89027	5prime_fragment	FALSE	canonical	3	186	junction_1	24.4909280256089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGACTGAGAAATTGAAT	-1	True	NA	NA	False	NA	NA	NA	41870425	41838627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_75066.known	chr5	+	499	2	FSM	ENSG00000248668.3	ENST00000510509.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGATGAGTCTTGGCC	NA	False	NA	NA	False	NA	NA	NA	41870119	41870716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_41870193_41870290
transcript_75067.known	chr5	+	5246	6	FSM	ENSG00000205765.10	ENST00000381647.7	5246	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	16.5093912667912	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTGTTTTATATT	-5	True	NA	5	True	AATAAA	-15	NA	41904343	41921636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068_41912184_41917015
transcript_75070.known	chr5	+	3493	9	FSM	ENSG00000198865.10	ENST00000361970.10	3493	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	15.4550760269887	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGTACTTTATTTGG	-19	True	NA	13	True	ATTAAA	-17	NA	42756817	42802439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828_42796957_42799374_42799459_42799658
transcript_75076.known	chr5	-	1853	6	FSM	ENSG00000250722.6	ENST00000511224.5	1853	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	228.301029345029	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTCTAAAACTTGAG	-1	True	NA	11	True	AATAAA	-34	NA	42811892	42800111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42809759_42809789_42811835
transcript_75078.known	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	116.233332138419	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-1	True	NA	-2	True	AATAAA	-24	NA	42811892	42799879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
transcript_75081.known	chr5	-	799	3	FSM	ENSG00000250722.6	ENST00000506078.5	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	12.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTCTGTATGTGTTTGT	-1	True	NA	NA	False	NA	NA	NA	42811892	42806582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_42807109_42808150_42808367_42811835
transcript_75084.known	chr5	+	2599	8	FSM	ENSG00000172262.12	ENST00000510026.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	60.8199081262854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	-4	True	NA	NA	False	NA	NA	NA	43120917	43175734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161614_43161708_43161932_43173317_43173449_43174446
transcript_75086.known	chr5	+	2400	8	FSM	ENSG00000172262.12	ENST00000306938.8	2400	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	51.6550568478942	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCAC	13	True	NA	NA	False	NA	NA	NA	43121539	43175719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_75088.known	chr5	+	3209	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	39.1397287592408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGACTCTTTTTTAAAA	32	False	NA	23	True	AGTAAA	-16	NA	43121595	43176324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_75090.known	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	46.9136322286911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	-8	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_75092.nic	chr5	+	2562	7	NIC	ENSG00000172262.12	novel	2400	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	18	junction_1	54.3527572642108	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	3	True	NA	NA	False	NA	NA	NA	43121494	43175734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_75093.nic	chr5	+	3075	7	NIC	ENSG00000172262.12	novel	2400	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	18	junction_1	54.3527572642108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	3	True	NA	16	True	AATAAA	-17	NA	43121494	43176247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_75096.nic	chr5	+	2749	7	NIC	ENSG00000172262.12	novel	3209	8	NA	NA	28	0	intron_retention	FALSE	canonical	3	58	junction_1	39.4799527186478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	4	True	NA	NA	False	NA	NA	NA	43121567	43175734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_75102.nnic	chr5	+	1481	3	NNC	ENSG00000172262.12	novel	476	3	NA	NA	-575	0	intron_retention	FALSE	canonical	3	4	junction_2	2	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTCTCTAAGCGTCCT	-32	True	NA	NA	False	TATAAA	-21	NA	43067005	43080503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_43067635_43067969_43068218_43079899
transcript_75103.nic	chr5	+	2051	3	ISM	ENSG00000172262.12	ENST00000306938.8	2400	8	-45	50673	-13	0	5prime_fragment	FALSE	canonical	3	18	junction_1	73	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTTATCATATTGAAT	3	True	NA	NA	False	NA	NA	NA	43121494	43125046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_43121569_43122038_43122178_43123208
transcript_75105.nnic	chr5	+	1718	2	NNC	ENSG00000172262.12	novel	990	3	NA	NA	-575	-11285	intron_retention	FALSE	canonical	3	8	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGATATTTCTT	-32	True	NA	NA	False	ATTAAA	-21	NA	43067005	43069058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_43067635_43067969
transcript_75106.known	chr5	+	501	5	FSM	ENSG00000172262.12	ENST00000508259.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.4733992368752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCACTGAGTCATTGC	6	True	NA	NA	False	AAAAAG	-22	NA	43121532	43161332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43121569_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_75107.known	chr5	+	1927	2	FSM	ENSG00000172262.12	ENST00000510037.1	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTTATCATATTGAAT	458	False	NA	NA	False	NA	NA	NA	43122088	43125046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43122178_43123208
transcript_75108.known	chr5	-	646	3	FSM	ENSG00000177738.5	ENST00000503152.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTATTTATTTATT	-5	True	NA	89	True	GATAAA	-40	NA	43067452	43014730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43015151_43067086_43067158_43067297
transcript_75109.known	chr5	+	920	1	FSM	ENSG00000272382.1	ENST00000607830.1	920	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGCCTGTGTTCCT	NA	False	NA	8	True	AATAAA	-20	NA	43033715	43034635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43033700_43034600
transcript_75110.known	chr5	-	5350	11	FSM	ENSG00000112972.15	ENST00000325110.11	5350	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_10	43.6312961072669	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCTCAGGCTCTGT	-1	True	NA	-1	True	AATAAA	-15	NA	43313412	43287469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43307765_43307825_43313355
transcript_75118.known	chr5	-	3466	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	36.3318042491699	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	NA	False	NA	-8	True	AATAAA	-20	NA	43313512	43289394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
transcript_75121.nnic	chr5	-	2284	5	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	-32	0	intron_retention	FALSE	canonical	2	5	junction_3	29.2435890410189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGGAAATTTGCTTTT	443	False	NA	89	True	AATAAA	-1	NA	43483925	43445237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_43446558_43453657_43454044_43476113_43476490_43479889_43479988_43483821
transcript_75122.known	chr5	-	2950	5	FSM	ENSG00000151881.15	ENST00000500337.6	2950	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	30.144443932506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTTGTCATAACT	27	True	NA	NA	False	AATAAA	-35	NA	43483836	43444251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43446558_43453657_43454044_43476113_43476259_43479889_43479988_43483821
transcript_75123.nnic	chr5	-	2193	5	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	-32	-91	intron_retention	FALSE	canonical	2	5	junction_3	29.2435890410189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTTTATATACTAT	443	False	NA	-2	True	ATTAAA	-17	NA	43483925	43445328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_43446558_43453657_43454044_43476113_43476490_43479889_43479988_43483821
transcript_75124.nnic	chr5	-	2683	4	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	0	-425	intron_retention	FALSE	canonical	1	2	junction_3	33.3466640010661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTGACTAAATTGCAAAA	-2	True	NA	-25	True	AATAAA	-21	NA	43483865	43444676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_43446558_43453657_43454044_43476113_43476486_43483821
transcript_75126.known	chr5	-	1927	4	FSM	ENSG00000151881.15	ENST00000512085.5	1927	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.7123616632825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGGAAATTTGCTTTT	-28	True	NA	89	True	AATAAA	-1	NA	43483891	43445237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43446558_43453657_43454044_43454454_43454606_43483821
transcript_75129.nnic	chr5	-	2038	4	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	-7	-91	intron_retention	FALSE	canonical	1	2	junction_3	33.3466640010661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTTTATATACTAT	-9	True	NA	-2	True	ATTAAA	-17	NA	43483872	43445328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_43446558_43453657_43454044_43476113_43476486_43483821
transcript_75130.known	chr5	-	2736	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	6.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTTGTCATAACT	-2	True	NA	NA	False	AATAAA	-35	NA	43483865	43444251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43446558_43453657_43454044_43483821
transcript_75136.known	chr5	-	2502	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	0	0	0	multi-exon	TRUE	canonical	2	47	junction_12	15.4919333848297	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	2	True	NA	-9	True	AATAAA	-15	NA	43515148	43486708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
transcript_75138.nic	chr5	-	2298	12	NIC	ENSG00000172244.9	novel	2502	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	21.8809702596602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	NA	False	NA	-9	True	AATAAA	-15	NA	43515175	43486708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43514805
transcript_75140.nic	chr5	-	2232	11	NIC	ENSG00000172244.9	novel	2502	13	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	26.5811963613378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	NA	False	NA	-9	True	AATAAA	-15	NA	43515199	43486708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43514805
transcript_75151.nnic	chr5	-	1579	12	NNC	ENSG00000172239.14	novel	2780	11	NA	NA	165	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	379.404622755964	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	808	False	NA	0	True	AATAAA	-36	NA	43556888	43527092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581_43556610_43556795
transcript_75152.nic	chr5	-	2471	11	NIC	ENSG00000172239.14	novel	2780	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_10	360.884593741545	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAGTAGCATCTGGT	1307	False	NA	-6	True	AATAAA	-25	NA	43556389	43526266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_75154.known	chr5	-	1814	11	FSM	ENSG00000172239.14	ENST00000338972.8	1814	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	366.83238679266	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	1	True	NA	0	True	AATAAA	-36	NA	43557695	43527092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43557339
transcript_75155.nic	chr5	-	1645	11	NIC	ENSG00000172239.14	novel	1814	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_10	360.884593741545	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	1307	False	NA	0	True	AATAAA	-36	NA	43556389	43527092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_75158.nic	chr5	-	1645	11	NIC	ENSG00000172239.14	novel	2780	11	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_10	360.884593741545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGCTGCAATAAAATC	1255	False	NA	-52	True	NA	NA	NA	43556441	43527144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_75160.nic	chr5	-	1505	11	NIC	ENSG00000172239.14	novel	2780	11	NA	NA	25	-52	combination_of_known_junctions	FALSE	canonical	3	109	junction_10	360.884593741545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAATGTGTATATATAT	1343	False	NA	-104	True	AATAAA	-16	NA	43556353	43527196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_75162.known	chr5	+	6483	22	FSM	ENSG00000112992.18	ENST00000264663.9	6483	22	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	17.3147467066296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTACACATTATAT	30	True	NA	NA	False	AATAAA	-29	NA	43602722	43707405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43602891_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_75164.known	chr5	+	6421	22	FSM	ENSG00000112992.18	ENST00000344920.9	6421	22	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	12.5703462737578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTATAAGTTTTTAC	-26	True	NA	NA	False	AATAAA	-20	NA	43603179	43707396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_43603295_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_75169.known	chr5	-	4803	3	FSM	ENSG00000248092.8	ENST00000513560.7	4803	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAGATATAAAATG	-14	True	NA	91	True	NA	NA	NA	43603138	43571593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_43575936_43583466_43583567_43602777
transcript_75174.known	chr5	-	220	2	FSM	ENSG00000251141.6	ENST00000505637.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	22	True	NA	0	True	ATTAAA	-20	NA	44808736	44777203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_44777329_44808641
transcript_75175.known	chr5	+	1648	5	FSM	ENSG00000112996.11	ENST00000507110.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	43.5229824345713	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAATTAAAAGAACCC	-1	True	NA	4	True	AATAAA	-17	NA	44808946	44815514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912
transcript_75178.known	chr5	-	4202	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	26.4988207284777	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	-16	True	NA	-1	True	AATAAA	-25	NA	50441288	50396191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_75182.known	chr5	+	7475	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	18.2829319311756	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	3	True	NA	NA	False	AATAAA	-19	NA	50666636	50846519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_75183.known	chr5	+	3825	26	FSM	ENSG00000151883.19	ENST00000505554.5	3825	26	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.198851452496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAATGTATA	145	False	NA	-22	True	NA	NA	NA	50667556	50843374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_50667602_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_75184.nic	chr5	+	2943	25	NIC	ENSG00000151883.19	novel	7475	26	NA	NA	-18	0	intron_retention	FALSE	canonical	2	2	junction_4	21.8782934028736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGCTGATATTTT	-8	True	NA	18	True	AATAAA	-14	NA	50666919	50842341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_75191.known	chr5	+	484	2	FSM	ENSG00000151883.19	ENST00000513414.1	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATAGAGTTGCT	58	False	NA	NA	False	NA	NA	NA	50666760	50668128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_50667187_50668070
transcript_75192.nic	chr5	+	1481	3	ISM	ENSG00000016082.15	ENST00000505475.3	1212	5	3383	-893	3383	-270	3prime_fragment	FALSE	canonical	3	20	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGTTTGCTCTTGC	3412	False	NA	40	True	AATAAA	-21	NA	51389586	51394460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_51389933_51391273_51391442_51393493
transcript_75193.known	chr5	+	4371	3	FSM	ENSG00000152684.11	ENST00000274311.3	4371	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	67.5	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTGTTATCAAGAAT	-28	True	NA	NA	False	AATAAA	-25	NA	52787915	52804044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_52788415_52799884_52801121_52801408
transcript_75196.known	chr5	-	1251	7	FSM	ENSG00000164172.20	ENST00000510818.6	1251	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	89.9384048483553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAAAGAGTATTTTCT	15	True	NA	-9	True	AATAAA	-22	NA	53109742	53098070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53098668_53100410_53100488_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_75197.known	chr5	-	4166	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	87.9974747112413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	0	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
transcript_75198.known	chr5	-	3705	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_6	21.3229141222926	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	0	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_75199.known	chr5	-	3568	6	FSM	ENSG00000164172.20	ENST00000361377.8	3568	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	96.5331031304806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-14	True	NA	2	True	AATAAA	-23	NA	53109771	53095678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53098668_53100410_53100535_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_75201.known	chr5	+	3137	2	FSM	ENSG00000247796.3	ENST00000499459.2	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	33	False	NA	NA	False	AATAAA	-22	NA	53109898	53115126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53110149_53112239
transcript_75204.known	chr5	+	1536	2	FSM	ENSG00000247796.3	ENST00000667672.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	15	True	NA	NA	False	AATAAA	-22	NA	53109880	53115126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53110149_53113858
transcript_75205.known	chr5	+	2299	6	FSM	ENSG00000134363.12	ENST00000256759.8	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_4	35.4141214771735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCAATTCCTGATGAT	1	True	NA	13	True	AATAAA	-38	NA	53480628	53487134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485950
transcript_75209.known	chr5	+	2538	6	FSM	ENSG00000134363.12	ENST00000396947.7	2538	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	92.63563029418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAATTTTAA	-2	True	NA	-15	True	AATAAA	-10	NA	53480625	53487106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485686
transcript_75210.known	chr5	+	705	4	FSM	ENSG00000134363.12	ENST00000504226.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	93.6055553906925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAGAAAAAAAGAA	656	False	NA	NA	False	NA	NA	NA	53483610	53486090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53483723_53484068_53484294_53484999_53485228_53485950
transcript_75212.known	chr5	+	833	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	480.399167359811	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	1	True	NA	25	True	AATAAA	-43	NA	53560646	53683338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
transcript_75216.known	chr5	+	669	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_2	55.3466349473931	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	-7	True	NA	25	True	AATAAA	-43	NA	53560638	53683338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
transcript_75218.known	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	485.245184302625	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	29	False	NA	25	True	AATAAA	-43	NA	53560674	53683338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
transcript_75220.known	chr5	-	578	5	FSM	ENSG00000185305.12	ENST00000507646.2	578	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.330482391973	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGGTAGAAGAT	7	True	NA	NA	False	NA	NA	NA	54310576	53887364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_53887384_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_75221.known	chr5	+	3422	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	72.7751483833748	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	-9	True	NA	NA	False	AAAAAG	-22	NA	55160167	55167071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
transcript_75223.known	chr5	+	425	4	FSM	ENSG00000164294.14	ENST00000511617.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	90.1566537878499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGAGGAGCCCATTGA	-10	True	NA	NA	False	NA	NA	NA	55160166	55164131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55160244_55160329_55160397_55161051_55161256_55164054
transcript_75225.nnic	chr5	+	1064	4	NNC	ENSG00000164294.14	novel	3731	3	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_3	107.054503252627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	NA	False	NA	9	True	AATAAA	-18	NA	55160158	55167297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_55160397_55160993_55161256_55164054_55164314_55166992
transcript_75227.known	chr5	+	3731	3	FSM	ENSG00000164294.14	ENST00000503787.6	3731	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	9.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	-6	True	NA	9	True	AATAAA	-18	NA	55160170	55167297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55160397_55160993_55161256_55164054
transcript_75229.known	chr5	+	1036	3	FSM	ENSG00000164294.14	ENST00000515370.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	98	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATATATGTATGCTTG	-7	True	NA	35	True	AATAAA	-45	NA	55160169	55164754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55160244_55160993_55161256_55164054
transcript_75232.known	chr5	-	1361	3	FSM	ENSG00000152669.9	ENST00000282572.5	1361	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAAGTGTCTGTCTGC	5	True	NA	0	True	AATAAA	-20	NA	55233608	55231151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55231861_55232360_55232547_55233142
transcript_75233.nic	chr5	-	4477	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.9200998499849	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-30	True	NA	-1	True	AATAAA	-17	NA	55307701	55256245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285862_55289269_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_75234.nic	chr5	-	1549	11	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-7	27498	-7	11697	5prime_fragment	FALSE	canonical	3	230	junction_1	29.5135562072753	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGGAAGAATTAAATA	-30	True	NA	NA	False	NA	NA	NA	55307701	55283746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55283812_55285292_55285417_55285695_55285862_55289269_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_75236.nic	chr5	-	1099	8	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-7	33116	-7	6079	5prime_fragment	FALSE	canonical	3	254	junction_1	26.3260559995187	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGGAAAAAGCCTCCTG	-30	True	NA	-95	True	NA	NA	NA	55307701	55289364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_75237.nic	chr5	-	843	6	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	0	37826	0	1369	5prime_fragment	FALSE	canonical	3	272	junction_5	25.8038756778899	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAGAAAAGAATGAGA	-23	True	NA	NA	False	AGTAAA	-40	NA	55307694	55294074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_75238.nic	chr5	-	893	5	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-121	39130	-121	65	5prime_fragment	FALSE	canonical	3	272	junction_4	28.6127157047352	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTGAGAATTAAGCAT	NA	False	NA	-1	True	AAAACA	-31	NA	55307815	55295378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_75239.known	chr5	-	4450	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	20	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.7700445887361	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-3	True	NA	-1	True	AATAAA	-17	NA	55307674	55256245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285856_55289263_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_75241.known	chr5	+	3961	27	FSM	ENSG00000039123.16	ENST00000230640.10	3961	27	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_6	51.7542697549663	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAATTAGTTTTTTCA	-9	True	NA	16	True	AATAAA	-14	NA	55307988	55425579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_55308148_55322326_55322465_55324131_55324199_55327715_55327779_55328698_55328812_55340009_55340185_55341680_55341772_55343330_55343456_55344521_55344621_55345093_55345197_55347012_55347145_55349572_55349653_55350918_55351030_55353167_55353270_55358572_55358699_55366724_55366876_55378313_55378487_55379126_55379196_55387973_55388103_55397415_55397527_55400232_55400422_55405424_55405589_55410523_55410630_55414181_55414239_55415969_55416133_55422877_55422983_55424719
transcript_75247.known	chr5	-	1542	6	FSM	ENSG00000067113.17	ENST00000307259.9	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	141.123208580304	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-1	True	NA	-11	True	ATTAAA	-19	NA	55534964	55424853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55534571
transcript_75249.known	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	322.582454575571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-6	True	NA	-11	True	ATTAAA	-19	NA	55534969	55424853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
transcript_75250.nic	chr5	-	1173	5	NIC	ENSG00000067113.17	novel	1542	6	NA	NA	204	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_4	181.838527270763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-26	True	NA	-11	True	ATTAAA	-19	NA	55534747	55424853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_75253.nic	chr5	-	2822	18	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	66.1971470966614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	NA	False	NA	0	True	AATAAA	-29	NA	55712352	55625844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
transcript_75257.nic	chr5	-	2666	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_14	48.448426187029	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	NA	False	NA	0	True	AATAAA	-29	NA	55712352	55625844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
transcript_75259.known	chr5	-	2522	16	FSM	ENSG00000177058.12	ENST00000396865.7	2522	16	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	32.5764741288352	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-1	True	NA	-3	True	AATAAA	-26	NA	55712324	55625847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_75268.nic	chr5	-	2454	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_14	55.8423893559328	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-12	True	NA	0	True	AATAAA	-29	NA	55712301	55625844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55712216
transcript_75270.nnic	chr5	-	2358	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_6	50.2900261950009	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	NA	False	NA	0	True	AATAAA	-29	NA	55712352	55625844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_75272.nic	chr5	-	2445	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_5	58.1448314863104	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	NA	False	NA	0	True	AATAAA	-29	NA	55712352	55625844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_75274.nnic	chr5	-	2410	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	60.4242230789431	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-10	True	NA	0	True	AATAAA	-29	NA	55712299	55625844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_75281.nnic	chr5	-	2195	14	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	1	0	combination_of_known_splicesites	TRUE	canonical	3	13	junction_5	60.5088873124187	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-8	True	NA	0	True	AATAAA	-29	NA	55712297	55625844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_75288.known	chr5	-	290	3	FSM	ENSG00000177058.12	ENST00000507216.1	290	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	80	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCTACAATATGTTTAT	-9	True	NA	NA	False	AATAAA	-25	NA	55712298	55704274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_55704435_55711451_55711500_55712216
transcript_75289.known	chr5	-	438	1	FSM	ENSG00000226221.1	ENST00000450941.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	40	False	NA	NA	False	AATACA	-33	NA	56505072	56504634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56504600_56505100
transcript_75290.known	chr5	-	619	4	FSM	ENSG00000237705.1	ENST00000415589.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGGTTTTCTGGCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	56862164	56842015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56842214_56851989_56852075_56859668_56859914_56862073
transcript_75291.known	chr5	-	5198	13	FSM	ENSG00000155545.20	ENST00000381213.7	5198	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	16.4170896730612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-5	True	NA	-4	True	AATAAA	-16	NA	56952125	56919602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928859_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_75292.known	chr5	-	5199	13	FSM	ENSG00000155545.20	ENST00000381199.8	5199	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	11.1679103785006	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-3	True	NA	-4	True	AATAAA	-16	NA	56952123	56919602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928862_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_75295.known	chr5	+	1396	6	FSM	ENSG00000155542.12	ENST00000285947.5	1396	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	15.0253119767944	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	-18	True	NA	NA	False	AGTAAA	-29	NA	56909595	56917348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_56909744_56911168_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_753.known	chr1	+	3320	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	71.5885232887693	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	443	False	NA	NA	False	ATTAAA	-22	NA	11654856	11663327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_75300.known	chr5	+	1009	5	FSM	ENSG00000155542.12	ENST00000418299.5	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	18.3762754659371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	1	True	NA	NA	False	AGTAAA	-29	NA	56909614	56917348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_56909744_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_75301.known	chr5	+	786	5	FSM	ENSG00000155542.12	ENST00000463805.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	21.6953335996476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGGTTTTCTACTCAGC	0	True	NA	NA	False	NA	NA	NA	56910059	56916919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_56910395_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_75302.known	chr5	+	417	2	FSM	ENSG00000155542.12	ENST00000423328.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTCCAGAATCTGT	45	False	NA	NA	False	AATAAA	-16	NA	56910104	56911295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_56910395_56911168
transcript_75313.nnic	chr5	+	2917	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-152	0	at_least_one_novel_splicesite	FALSE	canonical	1	166	junction_3	325.897851668621	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173795	57263085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_75316.nnic	chr5	+	2956	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-152	0	at_least_one_novel_splicesite	FALSE	canonical	1	216	junction_6	313.835236319244	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173795	57263085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_7532.known	chr1	+	1700	8	FSM	ENSG00000160753.16	ENST00000490373.5	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	91.0478681008748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCACCTGTAAGGTGAAA	14	True	NA	20	True	AATAAA	-20	NA	155324521	155330730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_75325.nic	chr5	+	2936	13	NIC	ENSG00000062194.16	novel	4683	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	166	junction_3	312.040183932917	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	5	True	NA	20	True	AATAAA	-23	NA	57174061	57263085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_75328.known	chr5	+	4683	13	FSM	ENSG00000062194.16	ENST00000424459.7	4683	13	0	0	0	0	multi-exon	FALSE	canonical	1	216	junction_6	299.364697688659	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATTCTATGCATTAAG	47	False	NA	15	True	TATAAA	-21	NA	57173947	57264679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_75336.nnic	chr5	+	2896	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-152	0	at_least_one_novel_splicesite	FALSE	canonical	1	350	junction_10	247.008381428379	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173795	57263085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_75337.nnic	chr5	+	3398	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-152	0	at_least_one_novel_splicesite	FALSE	canonical	1	350	junction_10	247.008381428379	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	NA	False	NA	10	True	AATAAA	-17	NA	57173795	57263587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_75341.known	chr5	+	4506	12	FSM	ENSG00000062194.16	ENST00000506184.7	4506	12	0	0	0	0	multi-exon	FALSE	canonical	1	350	junction_10	217.300911066689	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGTTATTCTATGC	2	True	NA	9	True	TATAAA	-15	NA	57174058	57264673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_7535.known	chr1	+	1749	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	127.110429251458	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	31	True	NA	24	True	AATAAA	-15	NA	155324538	155331114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_75354.known	chr5	+	3310	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_2	315.489524390272	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	-8	True	NA	10	True	AATAAA	-17	NA	57174048	57263587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_75373.known	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	11.2006973578334	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-2	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
transcript_75376.nic	chr5	+	1150	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-120	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	23.6682804614108	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATCTTAAATTTATAAG	30	False	NA	-33	True	NA	NA	NA	58582100	58851527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_75377.known	chr5	+	8861	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	19.8557296516648	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGCCTTAGTCTGAT	-11	True	NA	13	True	AATAAA	-25	NA	58583074	58859394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_75378.known	chr5	+	423	2	FSM	ENSG00000152932.8	ENST00000513316.1	423	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCTTTGAACTGGCA	8	False	NA	NA	False	AGTAAA	-45	NA	58582220	58617871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_58582415_58617642
transcript_75381.nnic	chr5	-	804	4	NNC	ENSG00000248475.5	novel	641	4	NA	NA	-120127	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGACCTTTGTTTCT	NA	False	NA	-10	True	AATAAA	-18	NA	58937226	58741580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_58742001_58814659_58814746_58817043_58817135_58937019
transcript_75383.nnic	chr5	+	631	3	NNC	ENSG00000247345.2	novel	729	2	NA	NA	-102421	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTGGAAATTTTCCTT	0	True	NA	NA	False	ATTAAA	-15	NA	58937339	59063510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_58937502_59060144_59060188_59063084
transcript_75384.nic	chr5	-	2616	12	NIC	ENSG00000035499.13	novel	2504	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	200.452339711633	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	28	False	60700192	-3	True	AATAAA	-23	NA	60700164	60596911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60687724_60687839_60700045
transcript_75387.known	chr5	-	2504	11	FSM	ENSG00000035499.13	ENST00000265036.10	2504	11	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_9	45.5407509819502	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	26	False	60700192	-3	True	AATAAA	-23	NA	60700166	60596911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_75391.known	chr5	-	1569	10	FSM	ENSG00000035499.13	ENST00000453022.6	1569	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	165.065493922717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGCCTTAGTTTTTA	-1	True	NA	NA	False	CATAAA	-24	NA	60700134	60597628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60597915_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_75397.known	chr5	-	1949	13	FSM	ENSG00000049167.16	ENST00000675452.2	1949	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	53.9621137671813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTTAACTTTGTGAAAA	5	True	NA	NA	False	GGGGCT	-37	NA	60945049	60874036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924430_60928863_60928960_60944931
transcript_75401.known	chr5	-	9414	12	FSM	ENSG00000049167.16	ENST00000676185.1	9414	12	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_2	25.0862973363864	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCAATAGAACTTTTT	-16	True	NA	NA	False	AATAAA	-30	NA	60945070	60866453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_75404.known	chr5	-	3672	11	FSM	ENSG00000049167.16	ENST00000682217.1	3672	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	47.0371130066461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCGTCTCTAAATAAA	-16	True	NA	NA	False	NA	NA	NA	60945070	60871997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_75406.known	chr5	-	1248	10	FSM	ENSG00000049167.16	ENST00000683199.1	1248	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	17.9009621094634	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATACTGTGCAACTT	391	False	NA	NA	False	AATGAA	-3	NA	60945030	60890703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_75407.known	chr5	-	2855	10	FSM	ENSG00000049167.16	ENST00000682246.1	2855	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	45.772383716725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTATCAGCAGGAAAAAAA	-10	True	NA	NA	False	AATAAA	-3	NA	60945064	60891687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60893644_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_75411.known	chr5	-	881	6	FSM	ENSG00000049167.16	ENST00000675229.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.7216351150314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	3	True	NA	0	True	ATTAAA	-18	NA	60945051	60903359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_75413.known	chr5	-	2236	13	FSM	ENSG00000049167.16	ENST00000381118.7	2236	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	54.4959223754911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTCAACCCACACGT	3	True	NA	-14	True	AATAAA	-21	NA	60945051	60873830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924509_60928863_60928960_60944931
transcript_75414.known	chr5	-	2095	13	FSM	ENSG00000049167.16	ENST00000643034.1	2095	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	54.4959223754911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGTGTCAACCCACAC	-10	True	NA	-16	True	AATAAA	-19	NA	60945064	60873832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924357_60928863_60928960_60944931
transcript_75416.known	chr5	+	632	4	FSM	ENSG00000164182.12	ENST00000296597.10	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_2	52.9591037184984	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-10	True	NA	28	True	AATAAA	-16	NA	60945204	61153026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945383_61073124_61073215_61098991_61099033_61152703
transcript_75417.known	chr5	+	2211	4	FSM	ENSG00000164182.12	ENST00000678452.1	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	277.777288888459	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATGTGTCTTTATAGTA	26	True	NA	NA	False	AATAAA	-8	NA	60945176	61154531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945429_61073124_61073215_61098991_61099033_61152703
transcript_75419.known	chr5	+	461	3	FSM	ENSG00000164182.12	ENST00000502658.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	380.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	120	False	NA	28	True	AATAAA	-16	NA	60945334	61153026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945383_61073124_61073215_61152703
transcript_75422.nnic	chr5	+	599	3	NIC	ENSG00000164182.12	novel	632	4	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	325	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-3	True	NA	28	True	AATAAA	-16	NA	60945147	61153026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_60945383_61098991_61099033_61152703
transcript_75423.known	chr5	+	586	3	FSM	ENSG00000164182.12	ENST00000511107.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	345.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-8	True	NA	28	True	AATAAA	-16	NA	60945206	61153026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_60945429_61098991_61099033_61152703
transcript_75424.known	chr5	-	584	4	FSM	ENSG00000188725.8	ENST00000507416.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	237.352527313745	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAATCATTTGGAAAAT	-51	True	NA	NA	False	AAAAAG	-32	NA	61162468	61159921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_61160200_61161087_61161228_61162216_61162360_61162445
transcript_75426.known	chr5	-	2888	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_2	0.5	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAGTATCCATGATAAC	-51	True	NA	1	True	AATAAA	-26	NA	61162468	61157703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_61160200_61161087_61161228_61162216
transcript_75430.known	chr5	+	3360	21	FSM	ENSG00000068796.19	ENST00000381103.7	3360	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	140.040529847612	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTTTTATCTTAGGAA	8	True	NA	12	True	AATAAA	-18	NA	62306250	62386383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62308308_62308512_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_75432.known	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	80.0684264150811	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	10	True	NA	23	True	AATAAA	-19	NA	62306451	62391025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_75434.known	chr5	+	2539	20	FSM	ENSG00000068796.19	ENST00000401507.7	2539	20	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	54.2672161431047	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTCCTTCACCTGA	5	True	NA	-37	True	NA	NA	NA	62306161	62385676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_75438.known	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_6	21.066208106039	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-11	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_75442.known	chr5	-	1468	11	FSM	ENSG00000086189.11	ENST00000679751.1	1468	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	130.638432323723	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-8	True	NA	-18	True	AGTAAA	-17	NA	62403902	62388526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62403272_62403347_62403693
transcript_75444.known	chr5	-	1518	11	FSM	ENSG00000086189.11	ENST00000681672.1	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	140.917848408213	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	8859	False	NA	-18	True	AGTAAA	-17	NA	62403929	62388526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_75446.known	chr5	+	7901	21	FSM	ENSG00000068796.19	ENST00000674632.1	7901	21	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	147.672365390414	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	-7	True	NA	23	True	AATAAA	-19	NA	62306205	62391025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62372437_62372552_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_75452.known	chr5	+	1787	6	FSM	ENSG00000068796.19	ENST00000675085.1	1787	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	67.4999259258853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTATTTCCTAGAAGAA	-7	True	NA	NA	False	NA	NA	NA	62306205	62354337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274
transcript_75453.known	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	128.052739651409	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-8	True	NA	-18	True	AGTAAA	-17	NA	62403902	62388526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
transcript_75454.known	chr5	-	1208	11	FSM	ENSG00000086189.11	ENST00000506390.5	1208	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	141.000319148575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGTGAGCCTCAT	-4	True	NA	1	True	AATAAA	-23	NA	62403898	62391716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_62392007_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_75455.known	chr5	+	4365	30	FSM	ENSG00000086200.17	ENST00000325324.11	4365	30	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	27.1873755412844	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTGATTTGTCTGA	-10	True	NA	15	True	ATTAAA	-19	NA	62412762	62628582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153
transcript_75456.nic	chr5	+	2935	29	ISM	ENSG00000086200.17	ENST00000325324.11	4365	30	-17	26752	-17	10180	5prime_fragment	FALSE	canonical	3	201	junction_6	26.4551025131182	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGAGGAAAAAGATGGT	0	True	NA	NA	False	NA	NA	NA	62412745	62601830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763
transcript_75479.nic	chr5	-	622	6	NIC	ENSG00000153006.16	novel	6878	5	NA	NA	-6	-55	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	253.336614013845	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTAAATCAAAAAAAGGGA	-6	True	NA	NA	False	AAAAAG	-8	NA	64768697	64724486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_64724574_64728106_64728180_64741056_64741201_64754314_64754363_64765044_64765122_64768504
transcript_75481.known	chr5	-	6878	5	FSM	ENSG00000153006.16	ENST00000513458.9	6878	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	74.9645749671136	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGTGTCTTGCTTTG	0	True	NA	-4	True	AATAAA	-42	NA	64768691	64718147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_64724574_64728106_64728180_64741056_64741201_64754314_64754363_64768504
transcript_7549.known	chr1	+	808	5	FSM	ENSG00000160752.15	ENST00000495308.5	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	612.998572592139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTAAGTTTTGGGGCTT	-2	True	NA	9	True	GATAAA	-21	NA	155308892	155318518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168
transcript_75493.known	chr5	+	612	4	FSM	ENSG00000145642.12	ENST00000506473.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	258.470286278498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGATATAATTCAAGAA	25	False	NA	-5	True	AATGAA	-14	NA	64690531	64717963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64690815_64694086_64694183_64695506_64695665_64717888
transcript_75494.known	chr5	+	846	4	FSM	ENSG00000145642.12	ENST00000509189.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	175.797231680896	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTGTAATATTGCTTTT	21	False	NA	19	True	AATAAA	-21	NA	64690441	64718090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64690815_64694086_64694200_64695506_64695665_64717888
transcript_75501.known	chr5	-	816	4	FSM	ENSG00000153006.16	ENST00000495198.6	816	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	84.0991478355558	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGCTGAGGTGAGAGG	30	True	NA	NA	False	AAGAAA	-44	NA	64768619	64727670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_64728180_64741056_64741201_64754314_64754363_64768504
transcript_75504.known	chr5	+	772	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	95.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTCCTTTGTATA	-4	True	NA	16	True	ATTAAA	-16	NA	64690502	64718190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64690815_64695506_64695665_64717888
transcript_75505.nic	chr5	-	405	3	ISM	ENSG00000153006.16	ENST00000495198.6	816	4	-98	13386	-26	0	5prime_fragment	FALSE	canonical	3	458	junction_2	97	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	64768717	64741056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_64741201_64754314_64754363_64768504
transcript_75506.known	chr5	+	2065	14	FSM	ENSG00000153015.17	ENST00000381070.8	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_11	57.743669444769	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAATATGGATGGGG	-14	True	NA	NA	False	AATAAA	-20	NA	64768929	65018750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_64977134_64977239_65018158
transcript_75512.known	chr5	+	2103	11	FSM	ENSG00000153015.17	ENST00000508024.2	3867	11	28	1736	0	22	multi-exon	FALSE	canonical	2	3	junction_10	202.354169712413	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTCTCCTCTGGATCT	2	True	NA	4	True	AATAAA	-16	NA	64768945	64808562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64807598
transcript_75516.nic	chr5	+	1714	11	ISM	ENSG00000153015.17	ENST00000692763.1	7794	12	-509	14993	-483	-14993	5prime_fragment	FALSE	canonical	3	548	junction_6	55.5302620199113	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGAAAATGCAGCAAAACA	NA	False	NA	NA	False	ATTAAA	-32	NA	64768434	64885506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442
transcript_75518.nic	chr5	+	1576	10	ISM	ENSG00000153015.17	ENST00000485990.2	1181	12	2067	0	-483	0	3prime_fragment	FALSE	canonical	3	548	junction_6	49.1889779885246	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGGACACAAGTGC	NA	False	NA	36	True	NA	NA	NA	64768434	64804312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228
transcript_75536.known	chr5	-	1586	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	123.564112913095	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	21	True	NA	-55	True	NA	NA	NA	65563125	65517819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
transcript_75537.nic	chr5	-	1673	11	NIC	ENSG00000123219.13	novel	1697	11	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_9	134.510371347343	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	NA	False	NA	-1	True	AATAAA	-21	NA	65563192	65517765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561496_65561565_65563097
transcript_75541.known	chr5	-	1731	11	FSM	ENSG00000123219.13	ENST00000396679.6	1731	11	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_9	59.9433065487716	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-22	True	NA	-1	True	AATAAA	-21	NA	65563168	65517765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_75543.known	chr5	-	1697	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_9	110.586843702133	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-22	True	NA	-1	True	AATAAA	-21	NA	65563168	65517765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
transcript_75548.nnic	chr5	-	1605	10	NIC	ENSG00000123219.13	novel	1731	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_8	137.105348339187	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	NA	False	NA	-1	True	AATAAA	-21	NA	65563192	65517765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65561462_65561565_65563097
transcript_75549.nnic	chr5	-	1571	10	NIC	ENSG00000123219.13	novel	1697	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_8	140.849100585707	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	NA	False	NA	-1	True	AATAAA	-21	NA	65563192	65517765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65561496_65561565_65563097
transcript_7555.known	chr1	+	2017	2	FSM	ENSG00000160752.15	ENST00000487002.1	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	2278	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	19	True	NA	NA	False	NA	NA	NA	155308913	155312979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155310206_155312254
transcript_75554.known	chr5	-	1040	10	FSM	ENSG00000123219.13	ENST00000510693.5	1040	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	142.779550356485	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTATTATTCATTTTT	1	True	NA	NA	False	NA	NA	NA	65563145	65518334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_7556.known	chr1	+	680	4	FSM	ENSG00000160752.15	ENST00000490140.1	680	4	0	0	0	0	multi-exon	FALSE	canonical	3	2260	junction_3	55.934485486743	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	3920	False	NA	13	True	AATAAA	-16	NA	155318718	155320665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155318929_155319610_155319689_155319793_155319929_155320408
transcript_75562.nic	chr5	-	821	9	ISM	ENSG00000123219.13	ENST00000396679.6	1731	11	-24	10698	-24	0	5prime_fragment	FALSE	canonical	3	270	junction_7	63.1653336490832	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAGGTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	65563192	65528463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_75563.nnic	chr5	-	1475	8	NIC	ENSG00000123219.13	novel	1731	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	160.561896005807	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	NA	False	NA	-1	True	AATAAA	-21	NA	65563192	65517765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65561462_65561565_65563097
transcript_7557.known	chr1	+	2163	8	FSM	ENSG00000160753.16	ENST00000292254.8	2163	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	39.3259534181296	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	20	False	NA	24	True	AATAAA	-15	NA	155324576	155331114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_75571.known	chr5	+	2109	11	FSM	ENSG00000113593.12	ENST00000261308.10	2109	11	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_5	68.1119666431678	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	7	True	NA	23	True	ATTAAA	-20	NA	65563295	65587549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65563507_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_75577.nnic	chr5	+	1342	7	NIC	ENSG00000113593.12	novel	2109	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	173.706089575339	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	1	True	NA	23	True	ATTAAA	-20	NA	65563289	65587549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_65563507_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_75578.known	chr5	+	8652	13	FSM	ENSG00000123213.23	ENST00000380985.10	8652	13	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_12	77.6292828483914	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	-21	True	NA	NA	False	AATAAA	-20	NA	65722204	65829283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_75582.known	chr5	+	1437	13	FSM	ENSG00000113597.18	ENST00000438419.6	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	47.1342644886805	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	2	True	NA	9	True	ATTAAA	-16	NA	65625033	65664764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_75584.known	chr5	+	2910	13	FSM	ENSG00000113597.18	ENST00000399438.8	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	47.7237420531496	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTATATTTTAATTA	-5	True	NA	115	True	AGTAAA	-18	NA	65625026	65666233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_75588.known	chr5	+	1410	12	FSM	ENSG00000113597.18	ENST00000505553.5	1410	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	26.2763445134923	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTTATCTTGTAATT	13	True	NA	11	True	ATTAAA	-18	NA	65625044	65664766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_75591.known	chr5	+	2715	12	FSM	ENSG00000113597.18	ENST00000231526.8	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	27.7074444750656	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTCTGTCTTTGTTTC	8	True	NA	7	True	AATAAA	-18	NA	65625039	65666069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_75597.known	chr5	-	3863	11	FSM	ENSG00000113595.15	ENST00000231524.14	3863	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	10.6512910015641	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGAAGTCCCATCAT	-16	True	NA	-21	True	AATAAA	-13	NA	65624333	65589689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
transcript_756.known	chr1	+	959	6	FSM	ENSG00000132879.14	ENST00000376768.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	81.5794091667744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTCTTCTTTGTGG	-10	True	NA	NA	False	NA	NA	NA	11654880	11661391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658532_11658629_11658735_11658872_11661129
transcript_7560.known	chr1	-	11457	28	FSM	ENSG00000116539.14	ENST00000677213.1	11457	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	3.55825514799273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAAACTTTTCCTAAC	NA	False	NA	-29	True	ATTAAA	-1	NA	155563162	155335286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155337752_155338088_155338391_155339327_155339369_155341935_155342103_155343313_155343487_155343603_155343743_155344182_155344274_155346382_155346470_155347655_155347905_155349326_155349460_155349541_155349597_155352705_155352859_155354472_155354631_155357315_155357411_155357584_155357750_155360300_155360410_155370503_155370651_155370776_155370984_155378280_155378390_155378502_155378549_155380042_155380117_155395458_155395554_155415743_155415924_155438326_155439069_155459796_155459899_155477885_155482450_155521099_155521619_155563072
transcript_75603.known	chr5	-	5448	11	FSM	ENSG00000197860.10	ENST00000381007.9	5448	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	8.12403840463596	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTATTTGATTTAATG	8	True	NA	0	True	AATAAA	-23	NA	65722109	65665927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_65670358_65671914_65671999_65672243_65672282_65680493_65680557_65680655_65680795_65685367_65685473_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65721916
transcript_75608.known	chr5	+	729	7	FSM	ENSG00000113597.18	ENST00000508304.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	7.24952105697718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATGTGTCTTGATTTT	37	False	NA	NA	False	NA	NA	NA	65625068	65652736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500
transcript_7561.nic	chr1	-	2314	3	ISM	ENSG00000116539.14	ENST00000679133.1	11431	28	-18	145435	-18	-20939	5prime_fragment	FALSE	canonical	3	6	junction_2	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAGAAAACCTCGG	NA	False	NA	NA	False	ATTAAA	-6	NA	155562859	155480735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155482450_155521099_155521619_155562778
transcript_75610.nic	chr5	+	690	4	ISM	ENSG00000113597.18	ENST00000508304.5	729	7	-42	14600	0	-14600	5prime_fragment	FALSE	canonical	3	155	junction_3	8.17856276425687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGGTTTTTTTATA	-5	True	NA	NA	False	NA	NA	NA	65625026	65638136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695
transcript_75611.known	chr5	+	1541	2	FSM	ENSG00000253251.3	ENST00000510585.3	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTAGTGCTAATTAT	-5	True	NA	NA	False	AATACA	-17	NA	65625026	65630928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_65625107_65629467
transcript_75612.known	chr5	+	6699	12	FSM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	20.5663610444719	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTTGAGTAGTAATT	-28	True	NA	19	True	AATAAA	-20	NA	66144299	66183615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
transcript_75617.nic	chr5	+	1782	11	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-94	6071	-12	-1313	5prime_fragment	FALSE	canonical	3	177	junction_5	19.231224609993	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGGACCACATCAGTGA	-32	True	NA	NA	False	GATAAA	-13	NA	66144205	66177544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513
transcript_75621.nic	chr5	+	1751	10	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-94	8574	-12	-3816	5prime_fragment	FALSE	canonical	3	177	junction_5	20.2362588647088	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTGGGAGCTTGTGCT	-32	True	NA	NA	False	CATAAA	-34	NA	66144205	66175041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945
transcript_75625.nic	chr5	+	1263	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	12966	0	0	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGAGAGAGAGGGAA	-28	True	NA	39	True	NA	NA	NA	66144299	66170649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_75626.nic	chr5	+	1523	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-94	12800	-12	0	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAGGACAAAGAAAAGG	-32	True	NA	-13	True	AAAAAG	-35	NA	66144205	66170815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_75627.nic	chr5	+	1582	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-94	12741	-12	59	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGGATAAAAAATCC	-32	True	NA	46	True	AAAAAG	-28	NA	66144205	66170874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_7563.known	chr1	+	911	2	FSM	ENSG00000235919.5	ENST00000456633.2	1225	2	16	298	16	-298	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCTTTTCATTCAGT	6	True	NA	NA	False	AAGAAA	-1	NA	155562041	155563646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155562287_155562980
transcript_75630.known	chr5	+	2625	10	FSM	ENSG00000145675.15	ENST00000320694.12	2625	10	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	12.7869532273918	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTCAGAATTAAAACTA	2	True	NA	NA	False	AGTAAA	-29	NA	68288367	68298583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_68288752_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_75638.known	chr5	+	2029	9	FSM	ENSG00000134057.15	ENST00000256442.10	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	5011	junction_3	250.308278678513	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCTTTTTTAAAAAGTT	0	True	NA	17	True	AATAAA	-20	NA	69167149	69178245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238_69177350_69177523
transcript_75648.known	chr5	+	1190	8	FSM	ENSG00000134057.15	ENST00000505500.5	1190	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	1813.00130013349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTTGAGTTGGA	40	False	NA	-40	True	NA	NA	NA	69167262	69177630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177523
transcript_7566.known	chr1	+	2438	14	FSM	ENSG00000125459.17	ENST00000649846.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	64.6641757181036	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	0	True	NA	9	True	NA	NA	NA	155610217	155614933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614061
transcript_75662.known	chr5	+	1354	9	FSM	ENSG00000153044.10	ENST00000283006.7	1354	9	0	0	0	0	multi-exon	TRUE	canonical	3	643	junction_7	93.2690161575644	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTATTTTTTTTTA	12	True	NA	14	True	AATAAA	-15	NA	69189582	69210357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_75663.known	chr5	+	1315	4	FSM	ENSG00000134056.12	ENST00000256441.5	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_1	80.8991141278238	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATATGCTTT	0	True	NA	22	True	AATAAA	-20	NA	69217759	69230158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69217872_69226337_69226402_69228199_69228388_69229207
transcript_75666.known	chr5	+	1200	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	469.453819761741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCATAGGAATAAAGATT	15	True	NA	NA	False	AAAAAG	-33	NA	69217831	69229875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
transcript_75668.known	chr5	+	298	3	FSM	ENSG00000134056.12	ENST00000507022.1	298	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	524.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTGTTTGTCATCAG	26	True	NA	-52	True	NA	NA	NA	69217785	69229231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69217872_69228199_69228388_69229207
transcript_75675.nic	chr5	+	1433	13	NIC	ENSG00000134058.12	novel	1426	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	221.580308992774	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	30	False	NA	19	True	AATAAA	-3	NA	69234840	69277305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69235042_69235393_69235454_69250744_69250832_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_75682.known	chr5	+	1426	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	42.187499617386	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATATAGTATCACAAATC	-5	True	NA	18	True	AATAAA	-30	NA	69234885	69277430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_75685.known	chr5	+	1164	11	FSM	ENSG00000134058.12	ENST00000514676.5	1164	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	184.569878365892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	21	False	NA	19	True	AATAAA	-3	NA	69234911	69277305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_75691.nic	chr5	+	1209	10	NIC	ENSG00000134058.12	novel	1426	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	178.941400160382	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	30	False	NA	19	True	AATAAA	-3	NA	69234840	69277305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69235042_69235393_69235454_69252417_69252452_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_75694.known	chr5	+	261	2	FSM	ENSG00000134058.12	ENST00000512985.1	261	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTATTATTAATTGACT	-8	True	NA	NA	False	AAGAAA	-43	NA	69234882	69235495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69235042_69235393
transcript_75696.known	chr5	+	3054	19	FSM	ENSG00000152942.19	ENST00000354868.10	3054	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	70.9024934698838	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	-10	True	NA	13	True	ATTAAA	-14	NA	69369817	69414801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69371034_69371172_69371453_69371558_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_75698.known	chr5	+	2943	18	FSM	ENSG00000152942.19	ENST00000354312.7	2943	18	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	29.2714299103501	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	-3	True	NA	13	True	ATTAAA	-14	NA	69369824	69414801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_757.known	chr1	+	2928	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	57.2174798466343	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	-14	True	NA	NA	False	ATTAAA	-22	NA	11654876	11663327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_75700.known	chr5	+	3057	18	FSM	ENSG00000152942.19	ENST00000616683.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	48.2435430536231	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	12	False	NA	11	True	ATTAAA	-12	NA	69370059	69414799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69370285_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_75703.known	chr5	+	2323	17	FSM	ENSG00000152942.19	ENST00000521422.5	2323	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	55.1541872843758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAATATGCTTTTCTGA	-8	True	NA	NA	False	NA	NA	NA	69369819	69414360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69371034_69371172_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_75704.known	chr5	+	2789	17	FSM	ENSG00000152942.19	ENST00000345306.10	2789	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	58.2346747543935	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	14	True	NA	13	True	ATTAAA	-14	NA	69369841	69414801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69369934_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_7572.known	chr1	+	2422	14	FSM	ENSG00000125459.17	ENST00000245564.8	2422	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_13	20.7407211734042	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTTATTCCACACA	0	True	NA	27	True	NA	NA	NA	155610217	155614951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
transcript_75722.known	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	380.153258568173	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-9	True	NA	NA	False	TATAAA	-16	NA	69369520	69350983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
transcript_75723.known	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	373.43699267748	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	NA	False	NA	-6	True	AATAAA	-17	NA	69370013	69351725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
transcript_75728.known	chr5	-	587	4	FSM	ENSG00000085231.14	ENST00000512561.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_3	423.529088598279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTTTCTTTTTCTC	-9	True	NA	10	True	ATTAAA	-42	NA	69369520	69351929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69369462
transcript_75739.known	chr5	-	1057	3	FSM	ENSG00000273841.6	ENST00000508954.4	1705	3	0	648	0	-489	multi-exon	FALSE	canonical	3	53	junction_2	660	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCCATTGATCAAGCC	528	False	NA	NA	False	AAGAAA	-8	NA	69369465	69365431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69368824
transcript_75742.known	chr5	-	761	3	FSM	ENSG00000273841.6	ENST00000509462.6	1057	3	0	296	0	-296	multi-exon	FALSE	canonical	3	13	junction_2	680	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGACCATGTCTGTTTCA	677	False	NA	NA	False	NA	NA	NA	69369316	69365238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369164
transcript_75743.known	chr5	-	582	3	FSM	ENSG00000273841.6	ENST00000512152.6	996	3	0	414	0	-414	multi-exon	FALSE	canonical	3	31	junction_2	671	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTGAAATCTTTACAGAA	34	True	NA	NA	False	NA	NA	NA	69369477	69365356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369386
transcript_75744.known	chr5	-	1163	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	0	0	0	multi-exon	FALSE	canonical	3	1373	junction_1	204	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGTGCTTTGGCAGTT	-9	True	NA	-16	True	AATAAA	-17	NA	69369520	69364742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369462
transcript_75745.known	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	657.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	NA	False	NA	-17	True	AATAAA	-16	NA	69370013	69364743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_69365755_69366502_69366596_69369656
transcript_75747.known	chr5	+	4423	7	FSM	ENSG00000152939.17	ENST00000325631.10	4423	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	44.9175169987538	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	-2	True	NA	12	True	AATAAA	-25	NA	69415115	69444330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69415171_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_75752.known	chr5	+	6438	9	FSM	ENSG00000197822.12	ENST00000355237.6	6438	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	144.604417290759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	117	False	NA	9	True	NA	NA	NA	69492291	69558104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69492660_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_75756.known	chr5	+	6181	9	FSM	ENSG00000197822.12	ENST00000396442.7	6181	9	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_3	34.0640481299566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	-9	True	NA	9	True	NA	NA	NA	69492789	69558104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_75759.known	chr5	+	3168	8	FSM	ENSG00000197822.12	ENST00000680784.1	3168	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	156.345770649545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	-9	True	NA	NA	False	NA	NA	NA	69492789	69555253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_75760.nic	chr5	+	1485	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	-19	47	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	132.725515632828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATCTGACTTAAGAAA	NA	False	NA	NA	False	AATAAA	-39	NA	69560171	69592293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75762.nic	chr5	+	1717	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	-19	279	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	132.725515632828	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	69560171	69592525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75763.known	chr5	+	4555	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	132.188785454743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	69560190	69595221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75769.nic	chr5	+	1394	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-26	47	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	117.990319753595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATCTGACTTAAGAAA	NA	False	NA	NA	False	AATAAA	-39	NA	69560164	69592293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75770.nic	chr5	+	1626	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-26	279	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	117.990319753595	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	69560164	69592525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75771.nic	chr5	+	2014	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-26	53	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	117.990319753595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAAATTAATACATAT	NA	False	NA	NA	False	NA	NA	NA	69560164	69592913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75775.known	chr5	+	2952	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	111.356604354359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	28	False	NA	NA	False	NA	NA	NA	69560241	69593767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75789.known	chr5	+	1956	15	FSM	ENSG00000183474.16	ENST00000446221.6	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	115.731325905817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	80	False	NA	NA	False	NA	NA	NA	69560293	69592860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_75797.known	chr5	+	832	8	FSM	ENSG00000183474.16	ENST00000512736.5	832	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	152.116496710346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAATTGTAAGTTGGTT	-6	True	NA	NA	False	ATTAAA	-18	NA	69560207	69572844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444
transcript_758.nic	chr1	+	2156	6	NIC	ENSG00000132879.14	novel	1734	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	76.1698102925299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	446	False	NA	17	True	AATAAA	-18	NA	11654859	11662291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_75801.nnic	chr5	-	2012	7	NNC	ENSG00000253203.6	novel	1296	4	NA	NA	-31278	14738	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	37.3571352696584	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAAACATAGAATTACT	356	False	NA	NA	False	NA	NA	NA	69710537	69624720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_69625901_69640191_69640367_69642204_69642290_69645881_69646070_69679144_69679301_69680765_69680800_69710343
transcript_75802.nnic	chr5	-	1521	5	NNC	ENSG00000253203.6	novel	1296	4	NA	NA	-31268	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	46.5617869072913	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAATTAAAAAT	366	False	NA	NA	False	NA	NA	NA	69710527	69639458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_69640367_69642204_69642290_69645881_69646070_69679144_69679301_69710343
transcript_75807.nnic	chr5	+	1260	9	NNC	ENSG00000198237.8	novel	633	5	NA	NA	-30571	57753	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	30.4915459594951	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	322	False	NA	NA	False	NA	NA	NA	69844699	69978620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_69844914_69873663_69873698_69875163_69875320_69910374_69910563_69914157_69914243_69916080_69916256_69920731_69920868_69975737_69975853_69978463
transcript_75808.nnic	chr5	+	1774	8	NNC	ENSG00000198237.8	novel	633	5	NA	NA	-30571	1070	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_6	25.2796602922151	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGGGT	322	False	NA	NA	False	NA	NA	NA	69844699	69921937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_69844914_69873663_69873698_69875163_69875320_69910374_69910563_69914157_69914243_69916080_69916256_69920731_69920868_69921151
transcript_75812.known	chr5	+	703	3	FSM	ENSG00000205572.10	ENST00000380751.9	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	67	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70025246	70032696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025459_70026406_70026516_70032314
transcript_75814.known	chr5	+	1907	3	FSM	ENSG00000205572.10	ENST00000380750.8	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	924	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	70025250	70043113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025459_70026406_70026516_70041523
transcript_75815.known	chr5	+	433	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	0	0	0	0	multi-exon	TRUE	canonical	3	302	junction_1	865.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTAAAAACTATTTTAA	275	False	NA	NA	False	NA	NA	NA	70025586	70032493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025732_70026406_70026516_70032314
transcript_75818.nic	chr5	+	671	2	ISM	ENSG00000205572.10	ENST00000503931.5	569	3	-105	3253	0	354	5prime_fragment	FALSE	canonical	3	1899	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGGCCTCAT	NA	False	NA	NA	False	NA	NA	NA	70025250	70026869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_70025459_70026406
transcript_75822.known	chr5	+	569	3	FSM	ENSG00000205572.10	ENST00000503931.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	946.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCAGTGACCCTGCAA	44	False	NA	NA	False	AGTAAA	-13	NA	70025355	70030122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70025459_70026406_70026516_70029765
transcript_75827.known	chr5	+	1482	9	FSM	ENSG00000205571.14	ENST00000380743.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	450.583770652029	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	-1	True	NA	NA	False	AATAAA	-25	NA	70049668	70077595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520_70076575_70077018
transcript_75830.known	chr5	+	900	8	FSM	ENSG00000205571.14	ENST00000380741.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	393.274064484195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	16	False	NA	NA	False	AAAAAG	-45	NA	70049685	70076586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520
transcript_75831.known	chr5	+	1440	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	388.810535676518	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049653	70077592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
transcript_75832.known	chr5	+	1388	8	FSM	ENSG00000205571.14	ENST00000380742.8	1388	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	613.854898762479	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	-6	True	NA	NA	False	AATAAA	-22	NA	70049663	70077592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520_70076575_70077018
transcript_75837.known	chr5	+	804	7	FSM	ENSG00000205571.14	ENST00000614240.4	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	625.32989071547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	16	False	NA	NA	False	AAAAAG	-45	NA	70049685	70076586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520
transcript_75841.nic	chr5	+	1439	3	ISM	ENSG00000205571.14	ENST00000638794.1	846	8	-93	4025	-45	-3497	intron_retention	FALSE	canonical	3	1604	junction_1	58	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATTTCTGGAAGCAGAG	NA	False	NA	NA	False	AATATA	-42	NA	70049592	70067157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_70049767_70063414_70063487_70065964
transcript_75842.known	chr5	+	846	8	FSM	ENSG00000205571.14	ENST00000638794.1	846	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	524.100006035614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATTCACGCCATTCTC	16	False	NA	NA	False	NA	NA	NA	70049685	70071182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071170
transcript_75843.known	chr5	+	761	6	FSM	ENSG00000205571.14	ENST00000503678.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	1239	junction_4	169.378392954946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCACTCAGCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	70063410	70070755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640
transcript_75854.nnic	chr5	-	1582	6	NNC	ENSG00000253816.3	novel	497	4	NA	NA	-31309	740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.7730203297483	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTAAAAATTAAGTTC	0	True	NA	NA	False	NA	NA	NA	70290239	70219177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_70220093_70221930_70222016_70225607_70225796_70258881_70259038_70284796_70284871_70290075
transcript_75855.nnic	chr5	-	1530	5	NNC	ENSG00000253816.3	novel	497	4	NA	NA	-31331	740	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	56.3754157412608	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTAAAAATTAAGTTC	364	False	NA	NA	False	NA	NA	NA	70290261	70219177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_70220093_70221930_70222016_70225607_70225796_70258881_70259038_70290075
transcript_75860.known	chr5	+	1432	16	FSM	ENSG00000226259.10	ENST00000508065.7	1432	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	110.857666501791	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAATTCAGTAGTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	70415351	70447526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70415390_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_75864.nic	chr5	+	2132	16	NIC	ENSG00000226259.10	novel	1432	16	NA	NA	3	53	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	108.630996190467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAAATTAATACATAT	-6	True	NA	NA	False	NA	NA	NA	70415354	70448068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_70415551_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_75865.known	chr5	+	1954	15	FSM	ENSG00000226259.10	ENST00000513202.5	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	106.164701655263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	82	False	NA	NA	False	NA	NA	NA	70415442	70448015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70415551_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_75869.known	chr5	+	718	1	FSM	ENSG00000269983.1	ENST00000602697.1	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACTGATATATTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	70449635	70450353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70449600_70450400
transcript_75871.nnic	chr5	-	1532	7	NNC	ENSG00000196302.5	novel	418	4	NA	NA	-30573	35521	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	15.3776533392525	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCTCAAGAAACAAAA	313	False	NA	NA	False	AATAAA	-21	NA	70585839	70480865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_70481539_70516307_70516483_70518320_70518406_70522000_70522189_70555217_70555374_70556839_70556874_70585618
transcript_75876.nnic	chr5	+	1945	9	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31374	58453	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	31.0963723768545	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAAACCCAAAATCACT	334	False	NA	NA	False	AGTAAA	-24	NA	70719809	70854367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70785437_70785626_70789207_70789293_70791131_70791307_70795780_70795917_70850809_70850925_70853535
transcript_75878.nnic	chr5	+	1785	8	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31374	1073	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_6	26.7070272797713	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAAGGGTC	334	False	NA	NA	False	NA	NA	NA	70719809	70796987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70785437_70785626_70789207_70789293_70791131_70791307_70795780_70795917_70796200
transcript_75879.nnic	chr5	+	1082	8	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31374	57778	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	35.0946242758236	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	334	False	NA	NA	False	NA	NA	NA	70719809	70853692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70789207_70789293_70791131_70791307_70795780_70795917_70850809_70850925_70853535
transcript_75880.nnic	chr5	+	1757	8	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31374	58453	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	35.0946242758236	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAAACCCAAAATCACT	334	False	NA	NA	False	AGTAAA	-24	NA	70719809	70854367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70789207_70789293_70791131_70791307_70795780_70795917_70850809_70850925_70853535
transcript_75881.nnic	chr5	+	2068	7	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31374	1072	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_6	27.9548246680644	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGGGT	334	False	NA	NA	False	NA	NA	NA	70719809	70796986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70785437_70785626_70789207_70789293_70791131_70791307_70795780
transcript_75884.known	chr5	+	699	3	FSM	ENSG00000172058.16	ENST00000317633.14	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	1901	junction_1	65	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900668	70908115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70900877_70901824_70901934_70907733
transcript_75886.known	chr5	+	663	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_1	863	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	248	False	NA	NA	False	AATAAA	-16	NA	70900977	70908115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70901150_70901824_70901934_70907733
transcript_75905.known	chr5	+	1482	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_8	283.696333030584	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	-1	True	NA	NA	False	AATAAA	-25	NA	70925086	70953015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
transcript_75907.known	chr5	+	900	8	FSM	ENSG00000172062.17	ENST00000351205.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_7	248.900111101065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	16	False	NA	NA	False	AAAAAG	-45	NA	70925103	70952006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940
transcript_75909.known	chr5	+	1445	8	FSM	ENSG00000172062.17	ENST00000506163.5	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_7	400.82608575342	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATATTATTTTGCCCT	7	False	NA	NA	False	TTTAAA	-29	NA	70925094	70953040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70952438
transcript_75913.known	chr5	+	1219	7	FSM	ENSG00000172062.17	ENST00000503079.6	1219	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	562.812481106175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCTCTAGTCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	70925029	70952347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70946065_70946177_70951940
transcript_75917.known	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_16	146.977676876456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	31	False	NA	NA	False	NA	NA	NA	71067650	71035075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
transcript_75922.nnic	chr5	-	1716	17	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_16	148.366101249578	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTGTAAGAAGAAAGTT	NA	False	NA	NA	False	ATTAAA	-35	NA	71067703	71035328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
transcript_75932.known	chr5	-	4336	16	FSM	ENSG00000145736.14	ENST00000274400.9	4336	16	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	135.961007482129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTTA	80	False	NA	NA	False	AATAAA	-24	NA	71067601	71032669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_75935.nic	chr5	-	1605	16	NIC	ENSG00000145736.14	novel	4336	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_3	138.887228434519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTGTAAGAAGAAAGTT	-9	False	NA	NA	False	ATTAAA	-35	NA	71067690	71035328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_75951.nnic	chr5	-	972	9	NIC	ENSG00000145736.14	novel	860	8	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_8	177.134129969354	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	NA	False	AATATA	-31	NA	71067703	71055029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
transcript_75953.nic	chr5	-	1021	8	ISM	ENSG00000145736.14	ENST00000522654.5	1106	10	-15	6941	0	0	5prime_fragment	FALSE	canonical	3	164	junction_7	133.980199572739	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	-8	True	NA	NA	False	AATATA	-31	NA	71067689	71055029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_75955.known	chr5	-	860	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	143.187047641345	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	-8	True	NA	NA	False	AATATA	-31	NA	71067689	71055029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_75964.nic	chr5	+	1652	10	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-75	55902	-40	-21775	5prime_fragment	FALSE	canonical	3	19	junction_8	3.77123616632825	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGGAGGAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	71455610	71489575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403
transcript_75965.nic	chr5	+	1479	9	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-75	58851	-40	-24724	5prime_fragment	FALSE	canonical	3	19	junction_8	4	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTGATTTTAAAAGGAA	NA	False	NA	NA	False	AAGAAA	-28	NA	71455610	71486626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483
transcript_75967.nic	chr5	+	882	4	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-75	81404	-40	-47277	5prime_fragment	FALSE	canonical	3	30	junction_3	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAACTGAAAAGCC	NA	False	NA	NA	False	ATTAAA	-41	NA	71455610	71464073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057
transcript_75968.nic	chr5	+	750	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-75	86628	-40	-52501	5prime_fragment	FALSE	canonical	3	32	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGTAAGGGAGGAGAA	NA	False	NA	41	True	NA	NA	NA	71455610	71458849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_71456090_71458578
transcript_75969.known	chr5	+	3473	17	FSM	ENSG00000131844.17	ENST00000682045.1	3473	17	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	96.919243928902	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	28	True	AATAAA	-17	NA	71586786	71658706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_71586851_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_7597.known	chr1	+	2056	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_3	29.6660814549021	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	4	True	NA	NA	False	AATAAA	-32	NA	155689090	155739010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_75970.known	chr5	+	3486	17	FSM	ENSG00000131844.17	ENST00000683429.1	3486	17	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	92.4269136940101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTTCCTAATAAAGTCA	-4	True	NA	-4	True	AATAGA	-9	NA	71587333	71658674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_71587443_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_75972.known	chr5	+	3422	16	FSM	ENSG00000131844.17	ENST00000681968.1	3422	16	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	101.844631124517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	-2	True	NA	-10	True	AATAGA	-3	NA	71587277	71658668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_71587443_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_75973.nic	chr5	+	2147	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-144	14264	97	-13	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGGAGAAAGAAAAGC	-3	True	NA	-48	True	AAAAAG	-27	NA	72107330	72195301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_75974.nic	chr5	+	2270	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-146	14143	95	0	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAGAAAAAAGAACC	-5	True	NA	-49	True	AAAAAG	-37	NA	72107328	72195422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_75975.nic	chr5	+	2462	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-215	14020	26	105	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAAGAAGCTCCCTAA	NA	False	NA	74	True	AAAAAG	-22	NA	72107259	72195545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_75976.known	chr5	+	572	2	FSM	ENSG00000131711.15	ENST00000504183.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGTGTATATATATACA	7	True	NA	NA	False	NA	NA	NA	72107476	72116030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72107716_72115697
transcript_75977.known	chr5	+	11790	7	FSM	ENSG00000131711.15	ENST00000296755.12	11790	7	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	68.3780341597764	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGTGTGTGCTGTGCT	5	True	NA	11	True	AATAAA	-18	NA	72107474	72209565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865_72200368_72203562_72203802_72205083
transcript_75981.known	chr5	-	2628	11	FSM	ENSG00000113048.17	ENST00000457646.8	2628	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	229.636234074677	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	NA	False	NA	-5	True	AATAAA	-14	NA	72320255	72219527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
transcript_75984.known	chr5	-	2770	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	58.7676781913324	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCCACCACTAATATT	-6	True	NA	NA	False	ATTAAA	-25	NA	72320240	72219402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_75986.known	chr5	+	2195	11	FSM	ENSG00000049883.15	ENST00000308077.9	2195	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	26.4794259756514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGATTTCTCCACTT	-10	True	NA	NA	False	NA	NA	NA	72320372	72360225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359603
transcript_75987.known	chr5	+	11145	10	FSM	ENSG00000049883.15	ENST00000380639.10	11145	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	11.9422478600395	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTCCTTGAATT	-10	True	NA	5	True	AATAAA	-15	NA	72320372	72368395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_75993.known	chr5	+	2029	9	FSM	ENSG00000049883.15	ENST00000543322.5	2029	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	30.1662062579967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTCTGGTCACCAGTG	-16	True	NA	NA	False	AATATA	-17	NA	72320366	72359352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_75994.known	chr5	+	1001	9	FSM	ENSG00000049883.15	ENST00000510676.6	1001	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	29.1072907533491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCACCTTCCAGCCACTCA	5	True	NA	NA	False	ATTAAA	-19	NA	72320387	72358384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_75996.nic	chr5	+	1850	9	NIC	ENSG00000049883.15	novel	11145	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	27.4223335075628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATTTGTTAATGATTT	-7	True	NA	16	True	AATAAA	-19	NA	72320375	72359233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_72320510_72322171_72322265_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_75998.known	chr5	+	1440	8	FSM	ENSG00000049883.15	ENST00000503315.5	1440	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.286346390778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCATCTGCAAAACAAT	15	True	NA	NA	False	NA	NA	NA	72320397	72358912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_76.known	SIRV10002	+	10001	1	FSM	SIRV10002A	SIRV10002	10001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV10002_+_0_10000
transcript_760.known	chr1	+	822	6	FSM	ENSG00000132879.14	ENST00000376760.5	822	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.4165860480036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCCAGGTGTCC	19	True	NA	NA	False	NA	NA	NA	11654909	11661349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_76001.known	chr5	+	1653	7	FSM	ENSG00000049883.15	ENST00000503868.5	1653	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34.1390131993036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATTTGTTAATGATTT	-7	True	NA	16	True	AATAAA	-19	NA	72320375	72359233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72320510_72322171_72322265_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_76002.known	chr5	+	2648	10	FSM	ENSG00000049883.15	ENST00000486995.5	2648	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.6962798536555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATCTTATTTGTTAAT	-10	True	NA	11	True	AATAAA	-14	NA	72320372	72359228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72321180_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_76005.known	chr5	+	8489	25	FSM	ENSG00000083312.19	ENST00000337273.10	8489	25	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	36.9766959268492	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	-14	True	NA	19	True	AATAAA	-15	NA	72816660	72914388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_76006.known	chr5	+	3028	25	FSM	ENSG00000083312.19	ENST00000506351.6	3028	25	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	22.7437033410715	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTATTCAGTCT	13	False	NA	49	True	NA	NA	NA	72848183	72908951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_76007.known	chr5	+	11040	24	FSM	ENSG00000083312.19	ENST00000680533.1	11040	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_23	51.6997292428183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAAATGTTTGCAAACA	NA	False	NA	NA	False	AATAAA	-20	NA	72816311	72916733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72908708
transcript_76008.nic	chr5	+	3041	24	ISM	ENSG00000083312.19	ENST00000506351.6	3028	25	-121	3371	-58	0	5prime_fragment	FALSE	canonical	3	128	junction_1	23.1514288510448	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGGCTTTAAATTTAAA	1899	False	NA	40	True	AATAAA	-22	NA	72848062	72905580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
transcript_76010.known	chr5	+	8412	24	FSM	ENSG00000083312.19	ENST00000679378.1	8412	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	41.7566992010426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTTGTTTAACTATA	-12	True	NA	-1	True	AATAGA	-31	NA	72848120	72914368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_76020.known	chr5	+	4921	26	FSM	ENSG00000157107.14	ENST00000430046.7	4921	26	0	0	0	0	multi-exon	TRUE	canonical	2	59	junction_6	10.4079969254415	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGTTTATGTGTCTT	-15	True	NA	7	True	AATAAA	-19	NA	72956040	73090522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73041290_73041316_73051348_73051407_73052331_73052508_73054159_73054172_73054524_73054550_73056064_73056108_73058432_73058525_73063840_73063945_73068649_73068780_73074741_73074854_73077337_73077494_73078179_73078313_73081782_73081983_73082760_73082826_73087588_73087754_73088067
transcript_76022.known	chr5	-	744	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGTCTTAACCATGAA	7070	False	NA	-11	True	AATAAA	-21	NA	73498293	73497549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73497500_73498300
transcript_76025.known	chr5	+	1237	6	FSM	ENSG00000145741.17	ENST00000380591.8	1276	6	7	32	7	-32	multi-exon	FALSE	canonical	2	574	junction_1	1781.45102655111	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGGTATAAAGTTCT	8	True	NA	NA	False	ATTAAA	-26	NA	73498448	73505635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498800_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_76029.known	chr5	+	740	5	FSM	ENSG00000145741.17	ENST00000678135.1	740	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2116.09042517091	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGAAGAAGCCTGGGAAT	-5	True	NA	-31	True	NA	NA	NA	73498435	73505435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498559_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_7603.known	chr1	+	1470	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	101.206768140058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	4	True	NA	15	True	AATAAA	-11	NA	155689090	155738526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_76030.known	chr5	+	897	6	FSM	ENSG00000145741.17	ENST00000335895.12	897	6	0	0	0	0	multi-exon	FALSE	canonical	2	3711	junction_3	563.777828581437	7542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	NA	False	NA	29	True	AATAAA	-16	NA	73498407	73505495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_76031.known	chr5	+	1177	5	FSM	ENSG00000145741.17	ENST00000514360.5	1177	5	0	0	0	0	multi-exon	FALSE	canonical	3	4783	junction_1	172.322916351831	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	1	True	NA	29	True	AATAAA	-16	NA	73498441	73505495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73498559_73499133_73499203_73502487_73503118_73504346_73504404_73505191
transcript_76032.known	chr5	+	5096	13	FSM	ENSG00000164338.10	ENST00000296792.9	5096	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	15.2285824101333	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGAGAAACCATCTT	-15	True	NA	15	True	AATAAA	-29	NA	73565742	73583380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_73565913_73567261_73567435_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_76036.known	chr5	-	2161	9	FSM	ENSG00000164331.10	ENST00000296785.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	9.51232752800281	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTCATTTCTAGAAG	-12	True	NA	NA	False	AATAAA	-24	NA	73565639	73552189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562592_73562986_73565131
transcript_76037.nic	chr5	-	2092	9	NIC	ENSG00000164331.10	novel	2161	9	NA	NA	-35	-145	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	33.8228380683821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATACTACTTTTTTA	NA	False	NA	-11	True	AATAAA	-20	NA	73565702	73552334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562579_73562986_73565131
transcript_7604.known	chr1	+	1894	12	FSM	ENSG00000132676.16	ENST00000535183.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	104.543003923847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	4	True	NA	NA	False	NA	NA	NA	155689090	155738971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_76044.known	chr5	-	1298	4	FSM	ENSG00000164331.10	ENST00000515804.1	1298	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	9.17726659862414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6	True	NA	NA	False	AGTAAA	-1	NA	73565667	73557430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73557641_73561129_73561289_73562592_73562986_73565131
transcript_76047.known	chr5	-	573	2	FSM	ENSG00000164331.10	ENST00000509433.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATATGATTTTCTGGA	469	False	NA	-77	True	NA	NA	NA	73565204	73562485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_73562986_73565131
transcript_76048.known	chr5	-	3047	22	FSM	ENSG00000164347.18	ENST00000509430.5	3047	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	83.4325939452101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTAATATCTTATTTTA	529	False	NA	-19	True	AATAAA	-19	NA	74767105	74721257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74765034_74765153_74766937
transcript_76049.known	chr5	-	2993	21	FSM	ENSG00000164347.18	ENST00000296805.8	2993	21	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_11	33.1200845409549	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	13	True	NA	-5	True	AATAAA	-16	NA	74767117	74721205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_76051.known	chr5	-	2856	20	FSM	ENSG00000164347.18	ENST00000345239.6	2856	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	68.6274215725008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	9	True	NA	-5	True	AATAAA	-16	NA	74767121	74721205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_76054.known	chr5	-	1870	15	FSM	ENSG00000164347.18	ENST00000427854.6	1870	15	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	35.9583091927304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTGGTCTTGTTT	-16	True	NA	-1	True	AATATA	-13	NA	74767146	74736668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_76057.known	chr5	-	6118	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_12	65.3496471978915	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	6	True	NA	-1	True	AATAAA	-14	NA	74866966	74777573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
transcript_76066.known	chr5	+	4337	6	FSM	ENSG00000164346.10	ENST00000610426.5	4337	6	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_5	24.5519856630783	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTTTTTTTCTTC	-1	True	NA	NA	False	AATAAA	-16	NA	74767248	74780113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74773867_74774061_74776603
transcript_76067.nnic	chr5	+	823	5	NNC	ENSG00000164346.10	novel	1199	5	NA	NA	-7	840	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	206.481688050054	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCCTGTTCATTTACA	-9	True	NA	10	True	AATAAA	-17	NA	74767240	74772493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74772312
transcript_76068.known	chr5	+	1199	5	FSM	ENSG00000164346.10	ENST00000296802.9	1199	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	195.668725145333	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGCATTTGTGAGTG	-8	True	NA	22	True	AATATA	-19	NA	74766990	74776910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74776603
transcript_76070.known	chr5	+	645	3	FSM	ENSG00000164346.10	ENST00000514918.5	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	11.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTATTAGAATG	-2	True	NA	NA	False	AATAAA	-42	NA	74767247	74769554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213
transcript_76072.known	chr5	-	4821	3	FSM	ENSG00000171617.15	ENST00000302351.9	4821	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGGGTCTTCAT	-1	True	NA	-2	True	AATAAA	-22	NA	74640728	74627408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_74629993_74634683_74636499_74640306
transcript_76076.known	chr5	+	797	5	FSM	ENSG00000164346.10	ENST00000513356.1	797	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	210.807228291631	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACACTGTGAAACCC	13	True	NA	NA	False	NA	NA	NA	74767262	74771653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74771476
transcript_76077.known	chr5	+	2021	14	FSM	ENSG00000049860.14	ENST00000511181.5	2021	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	138.465982834655	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	NA	False	NA	28	True	AATAAA	-19	NA	74640022	74721288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_74640559_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_76079.known	chr5	-	3983	17	FSM	ENSG00000113163.19	ENST00000646713.1	3983	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	34.0236590477861	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTGATGTTTAAAAA	0	True	NA	-40	True	NA	NA	NA	75511617	75372418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400292_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_76080.known	chr5	+	4493	20	FSM	ENSG00000113161.17	ENST00000680160.1	4493	20	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_18	153.389172457337	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAATACCAATAAGTGTA	2	True	NA	3	True	AGTAAA	-13	NA	75337199	75362089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359512_75359984_75360140_75360287
transcript_76081.known	chr5	+	4530	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_12	58.2375972077476	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	-16	True	NA	15	True	AGTAAA	-25	NA	75337219	75362101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_76086.known	chr5	+	3681	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	145.221765280247	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	-4	True	NA	19	True	AATAAA	-26	NA	75337231	75361423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_76096.known	chr5	+	421	3	FSM	ENSG00000113161.17	ENST00000509431.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCAAATCATGTATTT	10	True	NA	NA	False	AATAAA	-5	NA	75337245	75344030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75337301_75342582_75342771_75343852
transcript_76097.known	chr5	+	5911	15	FSM	ENSG00000122008.15	ENST00000241436.8	5911	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	6.94732366616447	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTCGTTAACAAGATG	979	False	NA	NA	False	AATAAA	-20	NA	75511755	75601144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_75511915_75547009_75547158_75552471_75552592_75569339_75569493_75573737_75573870_75576779_75576934_75581208_75581449_75583292_75583418_75584759_75584927_75587025_75587059_75590343_75590441_75593877_75594050_75596221_75597179_75597746_75597790_75597933
transcript_76101.nnic	chr5	-	2084	12	NNC	ENSG00000152359.15	novel	2185	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	23.6622236158456	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	NA	False	NA	NA	False	ATTAAA	-4	NA	75717498	75674201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_75674579_75677773_75677951_75685206_75685401_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_76102.known	chr5	-	2185	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.7849343156133	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAACACTAAATCAT	-27	True	NA	NA	False	TATAAA	-14	NA	75717437	75674123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_76104.nic	chr5	-	2029	11	NIC	ENSG00000152359.15	novel	2185	12	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	23.4266941756621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	NA	False	NA	NA	False	ATTAAA	-4	NA	75717498	75674201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75712853_75712952_75717305
transcript_76107.nic	chr5	-	1991	11	NIC	ENSG00000152359.15	novel	2185	12	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	25.1165284225348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	NA	False	NA	NA	False	ATTAAA	-4	NA	75717498	75674201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_75674579_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_76109.nnic	chr5	-	1717	10	NNC	ENSG00000152359.15	novel	896	7	NA	NA	-50	3573	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	20.5035377856699	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTCTTTGCTGTCTGTA	NA	False	NA	-5	True	AATAAA	-21	NA	75717498	75686947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_75687329_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_76115.known	chr5	+	5808	36	FSM	ENSG00000145703.17	ENST00000274364.11	5808	36	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_14	28.9901320297449	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTTAAGTTGTCTT	5	True	NA	20	True	AATAAA	-20	NA	76403284	76708132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025_76665176_76668680_76668845_76671758_76671984_76673448_76673590_76673951_76674037_76674476_76674710_76677217_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453_76695667_76697986_76698148_76701075_76701214_76702481_76702591_76707199
transcript_76117.known	chr5	+	2861	2	FSM	ENSG00000164251.5	ENST00000296677.5	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTGTGCGTTTGT	-3	True	NA	10	True	TATAAA	-25	NA	76819029	76835315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_76819265_76832689
transcript_76118.nnic	chr5	+	1088	4	NNC	ENSG00000171643.14	novel	671	3	NA	NA	-843	205	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_3	7.87400787401181	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTGAATAGTATTT	9237	False	NA	9	True	AATAAA	-19	NA	76874457	76921231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_76874673_76875303_76875501_76877673_76877835_76920716
transcript_7612.known	chr1	-	2654	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	83.3863897767495	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-3	True	NA	-3	True	AATAAA	-29	NA	155688757	155659445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_76121.known	chr5	+	1645	7	FSM	ENSG00000145708.11	ENST00000274368.9	1645	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.3879226322456	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGGGCTTTATTTGC	0	True	NA	5	True	AATAAA	-23	NA	76953044	76969471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_76953216_76953600_76953695_76954028_76954187_76955652_76955864_76958740_76958890_76963342_76963461_76968727
transcript_76122.known	chr5	+	4490	14	FSM	ENSG00000164252.13	ENST00000312916.12	4490	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	23.639551653254	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTTTAATCACACTAC	-15	True	NA	51	True	CATAAA	-22	NA	77030403	77065234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530_77039720_77046346_77046678_77048160_77048273_77048935_77048988_77052705_77052808_77053964_77054131_77055513_77055597_77059615_77059744_77061702_77061803_77063051
transcript_76129.known	chr5	-	3678	13	FSM	ENSG00000164253.14	ENST00000296679.9	3678	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	32.7951342935706	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTCAGGCTCCAC	0	True	NA	-5	True	ATTAAA	-28	NA	77492316	77430932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_7613.known	chr1	-	2723	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_10	59.3202326360914	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-20	True	NA	-11	True	AATAAA	-21	NA	155688774	155659453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_76138.known	chr5	-	1507	11	FSM	ENSG00000164253.14	ENST00000515253.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	102.303519001059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAGAAGTTTTATTAT	304	False	NA	-11	True	AATAGA	-22	NA	77492199	77432812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_76144.known	chr5	-	551	5	FSM	ENSG00000171530.15	ENST00000518338.6	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1088.57349315515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAATGAGTTCATCTA	224	False	NA	-55	True	NA	NA	NA	77776261	77691266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77691499_77693265_77693353_77705565_77705635_77708241_77708348_77776204
transcript_76147.known	chr5	-	661	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_2	67.726574465928	2548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATCTGTTAGGTTCTA	4	True	NA	46	True	ATTAAA	-25	NA	77776339	77691165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
transcript_76150.known	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_1	67.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	7	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77693353_77708241_77708348_77776204
transcript_76151.known	chr5	-	446	3	FSM	ENSG00000171530.15	ENST00000520361.5	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGTTTATTTTAT	1	True	NA	-36	True	AATAAA	-12	NA	77776293	77691247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77691499_77708241_77708348_77776204
transcript_76153.known	chr5	-	717	3	FSM	ENSG00000171530.15	ENST00000518218.5	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_2	75.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	NA	False	NA	-29	True	AATAAA	-19	NA	77708613	77691240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_77691499_77693265_77693353_77708241
transcript_76155.known	chr5	-	3980	27	FSM	ENSG00000132842.14	ENST00000255194.11	3980	27	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_11	27.1193123178247	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	-4	True	NA	0	True	AATAAA	-18	NA	78294698	78002325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_76162.nic	chr5	-	1038	8	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-59	179263	-59	-59867	5prime_fragment	FALSE	canonical	3	229	junction_2	25.820415905849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCCGTATACTATGG	NA	False	NA	NA	False	NA	NA	NA	78294757	78181588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_76163.known	chr5	-	1479	2	FSM	ENSG00000245556.4	ENST00000421004.4	1482	2	0	3	0	-3	multi-exon	FALSE	canonical	3	58	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGCATGTATATTTA	576	False	NA	-3	True	ATTAAA	-20	NA	78360507	78358800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_78359986_78360213
transcript_76165.known	chr5	+	6143	9	FSM	ENSG00000085365.18	ENST00000621999.5	6143	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_7	42.4144359269341	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGTACCTCTGCTAA	-4	True	NA	11	True	AATAAA	-22	NA	78360616	78480739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_76169.nic	chr5	+	3586	8	NIC	ENSG00000085365.18	novel	6143	9	NA	NA	3	-534	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	134.5413979231	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTGTATAATTTTG	-7	True	NA	19	True	AATAAA	-16	NA	78360613	78478281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78459244_78459363_78475503
transcript_76171.known	chr5	+	1603	3	FSM	ENSG00000085365.18	ENST00000506858.2	1603	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	184	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGCAAGAAAATATAAATA	NA	False	NA	NA	False	AATAAA	-23	NA	78457792	78476829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_78457952_78459244_78459363_78475503
transcript_76173.known	chr5	+	2470	8	FSM	ENSG00000145692.15	ENST00000274353.10	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	2.9277002188456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTATTTTATTCT	-1	True	NA	NA	False	ATTAAA	-20	NA	79111808	79132288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754_79127984_79130932
transcript_76176.nic	chr5	+	1543	7	ISM	ENSG00000145692.15	ENST00000274353.10	2470	8	-32	3908	-32	183	5prime_fragment	TRUE	canonical	3	6	junction_4	3.0368111930481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATAGTGGTGC	NA	False	NA	NA	False	AATACA	-14	NA	79111776	79128380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754
transcript_76178.known	chr5	+	9096	11	FSM	ENSG00000152409.9	ENST00000396137.5	9096	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5.74543296888929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGATTTTGTTTGTT	8	True	NA	18	True	AATAAA	-20	NA	79236130	79327211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152_79300319_79300675_79300864_79306374_79306462_79312402_79312499_79314256_79314852_79315999_79316311_79321605
transcript_76180.known	chr5	-	5798	9	FSM	ENSG00000152413.15	ENST00000334082.11	5798	9	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	16.2307578381294	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATATCAAATGATTTT	1	True	NA	NA	False	NA	NA	NA	79514134	79372635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_79376198_79396822_79396904_79397526_79397638_79401898_79402056_79439009_79439150_79447052_79447146_79450989_79451122_79456861_79457019_79512769
transcript_76189.known	chr5	+	3129	16	FSM	ENSG00000164329.14	ENST00000296783.7	3129	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	46.7430802959706	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-2	True	NA	11	True	AATAAA	-21	NA	79612572	79686648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_76191.nic	chr5	+	2867	16	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	46.1343930514125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	-11	True	NA	NA	False	AATAAA	-17	NA	79612440	79686266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_76192.nic	chr5	+	3127	16	NIC	ENSG00000164329.14	novel	3129	16	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	46.1343930514125	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	31	False	NA	11	True	AATAAA	-21	NA	79612562	79686648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_762.known	chr1	+	1896	5	FSM	ENSG00000132879.14	ENST00000251546.8	1896	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	94.1674041269058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	1	True	NA	15	True	AATAAA	-16	NA	11654374	11662289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654582_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_76201.nic	chr5	+	2713	16	NIC	ENSG00000164329.14	novel	3129	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	46.9393935481347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	-2	True	NA	NA	False	AATAAA	-17	NA	79612572	79686266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_76204.known	chr5	+	3223	16	FSM	ENSG00000164329.14	ENST00000423041.6	3223	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	46.3338609082674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-19	True	NA	11	True	AATAAA	-21	NA	79612432	79686648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_76209.known	chr5	+	5100	15	FSM	ENSG00000164329.14	ENST00000453514.6	5100	15	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	29.912798434852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCTCATGAAATGAATA	-11	True	NA	NA	False	AATAAA	-24	NA	79612440	79688246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_76215.nic	chr5	+	3108	15	NIC	ENSG00000164329.14	novel	5100	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_6	28.7363099615118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	-11	True	NA	NA	False	AATAAA	-17	NA	79612440	79686266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_76216.nic	chr5	+	3490	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_6	28.7363099615118	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-11	True	NA	11	True	AATAAA	-21	NA	79612440	79686648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_7622.known	chr1	-	2524	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	111.367260299725	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-27	True	NA	-3	True	AATAAA	-29	NA	155688698	155659445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
transcript_76222.nnic	chr5	+	1429	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25679	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.43705983732471	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	79784431	79800222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79784600_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_76223.nnic	chr5	+	1498	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25695	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	1.78535710713571	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	79784447	79800222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79784685_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_76224.nic	chr5	+	3105	23	NIC	ENSG00000113296.14	novel	853	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	41.9670275926075	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	NA	False	NA	22	True	AATAAA	-24	NA	79991295	80083287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_79991413_79998331_79998376_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80061694_80061833_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
transcript_76227.nnic	chr5	+	780	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-15	-35811	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	21	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	NA	False	NA	3	True	AATAAA	-17	NA	79991295	80020095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79991413_79998331_79998376_80019476
transcript_76228.nnic	chr5	+	734	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-15	-35811	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	24	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	NA	False	NA	3	True	AATAAA	-17	NA	79991295	80020095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_79991413_79998331_79998376_80019522
transcript_7623.known	chr1	-	2555	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	103.225511250076	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-7	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_76231.known	chr5	+	1586	6	FSM	ENSG00000152380.10	ENST00000282226.5	1586	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.96988664825584	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCACGGCTCATTCC	-11	True	NA	NA	False	AGTAAA	-14	NA	80488099	80542563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_80488149_80501791_80501918_80513603_80513770_80519692_80519911_80522002_80522139_80541672
transcript_76236.known	chr5	+	6773	18	FSM	ENSG00000039319.17	ENST00000338008.9	6773	18	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.58011204072284	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCTATTCAACAAACTT	-1	True	NA	119	True	AGTAAA	-20	NA	80408012	80479350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_80408154_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_76238.known	chr5	-	4400	3	FSM	ENSG00000249042.6	ENST00000508000.6	4400	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	18	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATGTCTACAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	80488070	80479160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80483167_80485465_80485562_80487772
transcript_7624.known	chr1	-	2690	10	FSM	ENSG00000163374.20	ENST00000359205.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	114.997584515695	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-20	True	NA	-3	True	AATAAA	-29	NA	155688774	155659445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155688070_155688202_155688658
transcript_76240.nnic	chr5	-	470	3	NNC	ENSG00000249042.6	novel	5383	3	NA	NA	0	-3639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTGACAGTTTTGT	NA	False	NA	NA	False	GATAAA	-4	NA	80488070	80482799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80482941_80486184_80486221_80487777
transcript_76242.nnic	chr5	-	406	3	NNC	ENSG00000249042.6	novel	5383	3	NA	NA	0	-3689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTATTTCATTTTCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	80488070	80482849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80482937_80486194_80486221_80487777
transcript_76246.known	chr5	-	3730	5	FSM	ENSG00000189127.8	ENST00000338682.8	3730	5	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_2	7.3824115301167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTACTGATTTTTAT	-15	True	NA	0	True	AATAAA	-15	NA	80570280	80556754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80560043_80563734_80563816_80566688_80566775_80568959_80569108_80570153
transcript_76252.nnic	chr5	-	1711	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-231	-4739	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	2.94392028877595	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGTGAGCAAACAA	NA	False	NA	NA	False	NA	NA	NA	80570511	80564707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80565827_80566688_80566775_80568959_80569108_80570153
transcript_76254.nnic	chr5	-	1587	7	NNC	ENSG00000228716.7	novel	1719	7	NA	NA	-32	-635	intron_retention	TRUE	non_canonical	0	0	junction_1	317.780016503381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAAGGGGAAAGGGT	1035	False	NA	NA	False	AGTAAA	-12	NA	80654590	80626860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_80627531_80628834_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_76255.known	chr5	-	3919	6	FSM	ENSG00000228716.7	ENST00000439211.7	3919	6	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_1	47.848092960953	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCTCCTGTTGTTCTT	-4	True	NA	0	True	AATAAA	-22	NA	80654983	80626225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_76258.known	chr5	-	535	4	FSM	ENSG00000251450.2	ENST00000505694.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	417	False	NA	NA	False	AATAAA	-16	NA	80960907	80947696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_80947995_80948328_80948405_80951446_80951481_80960780
transcript_76259.known	chr5	-	601	2	FSM	ENSG00000247572.9	ENST00000512287.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAGCCCTTTTGTTAA	-3	True	NA	-25	True	ATTAAA	-16	NA	81301523	81235758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81236123_81301286
transcript_76260.known	chr5	-	2063	2	FSM	ENSG00000247572.9	ENST00000669977.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTAAAAAAGAAAATTTT	-9	True	NA	-50	True	AGTAAA	-1	NA	81301565	81237576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81239361_81301286
transcript_76261.known	chr5	+	1479	10	FSM	ENSG00000131730.16	ENST00000437669.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.97313070227992	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTTTGCTTTGTTTCTC	-3	True	NA	NA	False	AATAAA	-13	NA	81233319	81266395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81233382_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_76265.known	chr5	+	1580	6	FSM	ENSG00000131732.12	ENST00000407610.8	1580	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	46.9442222216963	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	-3	True	NA	NA	False	AATAAA	-30	NA	81301586	81313297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301699_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_76266.known	chr5	+	1372	6	FSM	ENSG00000131732.12	ENST00000380199.9	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	51.2288980947277	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATTTTTCTGAATA	9	True	NA	31	True	AATAAA	-35	NA	81301623	81313154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301671_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_76268.known	chr5	+	1248	6	FSM	ENSG00000131732.12	ENST00000438268.2	1248	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	79.5854258014619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCTAGCACTATCATG	-5	True	NA	NA	False	AAAACA	-28	NA	81301640	81312662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81302056_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_76269.known	chr5	+	818	5	FSM	ENSG00000131732.12	ENST00000506458.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	79.6692381035491	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATGCATAAATGTAAAA	8	True	NA	NA	False	TATAAA	-6	NA	81301622	81312972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301699_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_76271.known	chr5	+	768	5	FSM	ENSG00000131732.12	ENST00000507402.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	79.2369863132111	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAACCAAGTAGTTGTA	0	True	NA	NA	False	ATTAAA	-41	NA	81301589	81312917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81301671_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_76275.known	chr5	-	8780	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-156	217	0	-217	multi-exon	TRUE	canonical	3	145	junction_14	17.7935205903722	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGTATATAATTGAA	9648	False	NA	NA	False	CATAAA	-24	NA	81751253	81413020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_76276.nnic	chr5	-	1692	16	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	46.6497112054893	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	9759	False	NA	-39	True	AATAAA	-24	NA	81751142	81419935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81650266_81650340_81750980
transcript_76277.known	chr5	-	1790	16	FSM	ENSG00000145687.17	ENST00000514493.5	1790	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	48.5502717694648	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATCCTGTGAATCACAA	9651	False	NA	-21	True	AATAAA	-42	NA	81751250	81419917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_76278.known	chr5	-	1521	16	FSM	ENSG00000145687.17	ENST00000505980.5	1521	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	48.542032187465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAACTCAGATGTTATGG	14	True	NA	-117	True	NA	NA	NA	81751047	81420013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_76281.known	chr5	-	1534	15	FSM	ENSG00000145687.17	ENST00000509053.5	1534	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	63.8646528022428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTCTTCGTCTTTA	13	True	NA	24	True	AATAGA	-3	NA	81751048	81419872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_76282.nic	chr5	-	1697	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_14	48.2650526377259	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	NA	False	NA	-39	True	AATAAA	-24	NA	81616588	81419935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
transcript_76285.nic	chr5	-	3918	9	ISM	ENSG00000145687.17	ENST00000320672.9	8841	17	-17	50962	6	3207	5prime_fragment	FALSE	canonical	3	145	junction_6	18.3711730708738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGGATTTTTCTC	9787	False	NA	NA	False	NA	NA	NA	81751114	81463765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_76287.known	chr5	-	1396	13	FSM	ENSG00000145687.17	ENST00000504985.5	1396	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	51.3492940555175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	3906	False	NA	-39	True	AATAAA	-24	NA	81513717	81419935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627
transcript_76288.known	chr5	+	1795	9	FSM	ENSG00000152348.16	ENST00000458350.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	43.3804031216862	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	18	False	NA	25	True	ATTAAA	-26	NA	81972050	82254792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_76291.known	chr5	+	3029	8	FSM	ENSG00000152348.16	ENST00000282185.8	3029	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	23.7710164799446	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTGTTCTTGTCT	-10	True	NA	4	True	AATAAA	-17	NA	81972022	82256133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_76294.nnic	chr5	+	2010	8	NNC	ENSG00000152348.16	novel	618	5	NA	NA	-7120	-374	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	47.3588127264308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTTCCTGTA	8173	False	NA	16	True	AATACA	-15	NA	81980437	82254418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_81981418_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_76302.nnic	chr5	+	1356	7	NIC	ENSG00000152348.16	novel	1795	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	39.0924829375447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	-18	True	NA	25	True	ATTAAA	-26	NA	81972246	82254792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_81972307_81987558_81987679_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_76303.nic	chr5	+	909	7	NIC	ENSG00000152348.16	novel	1795	9	NA	NA	15	125	intron_retention	FALSE	canonical	3	29	junction_1	51.8665488430538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTACAAAGGCTGTGAT	11	True	NA	4	True	AATAAA	-17	NA	81972275	82276422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82276144
transcript_76306.nic	chr5	+	803	6	NIC	ENSG00000152348.16	novel	3029	8	NA	NA	-14	125	intron_retention	FALSE	canonical	3	45	junction_5	40.5788122053862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTACAAAGGCTGTGAT	-18	True	NA	4	True	AATAAA	-17	NA	81972246	82276422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82276144
transcript_76307.known	chr5	+	904	3	FSM	ENSG00000152348.16	ENST00000514253.2	904	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	43	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	82164444	82276857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_82164538_82178489_82178588_82276144
transcript_76308.known	chr5	-	595	4	FSM	ENSG00000186468.13	ENST00000503605.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_3	5426.75534325582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCCCTATACAAAG	485	False	NA	-113	True	NA	NA	NA	82278143	82276154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82277930
transcript_76309.known	chr5	-	3252	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	9445	junction_3	1326.67278055543	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGAGGTTTTGTCTGC	2	True	NA	-7	True	AATAAA	-17	NA	82278354	82273319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
transcript_76315.known	chr5	-	1589	1	FSM	ENSG00000271862.1	ENST00000607625.1	1589	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCAATTGTTATGTTTT	NA	False	NA	2	True	AATAAA	-22	NA	83050964	83049375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83049400_83051000
transcript_76317.known	chr5	+	1243	8	FSM	ENSG00000152422.16	ENST00000542685.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	41.910497442984	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	11	False	NA	21	True	AATAAA	-21	NA	83077556	83311069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_76318.known	chr5	+	1579	8	FSM	ENSG00000152422.16	ENST00000338635.10	1579	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	22.865177159397	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACATAAACATTGTGAAAA	NA	False	NA	-32	True	AATATA	-11	NA	83077526	83353711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_76320.known	chr5	+	1636	8	FSM	ENSG00000152422.16	ENST00000511817.1	1636	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	38.1639855874405	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGTTAACTTTTATTT	0	True	NA	44	True	AATAAA	-45	NA	83077592	83353787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_76322.nic	chr5	+	2012	4	ISM	ENSG00000152422.16	ENST00000542685.5	1243	8	-51	113723	8	-61993	5prime_fragment	FALSE	canonical	3	98	junction_1	22.0655588845805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTATGGTCGTGATAAG	NA	False	NA	NA	False	AATAAA	-16	NA	83077505	83197346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769
transcript_76324.known	chr5	-	596	3	FSM	ENSG00000174695.10	ENST00000504622.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTTTATAGAATGAGA	NA	False	NA	-84	True	NA	NA	NA	83077453	83056726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83057155_83061876_83061912_83077320
transcript_76328.known	chr5	-	4528	4	FSM	ENSG00000174695.10	ENST00000502346.2	4528	4	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_3	109.414603940953	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTACTTTTGTCTT	-21	True	NA	-9	True	AATAAA	-20	NA	83077394	83052845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077320
transcript_76329.known	chr5	+	2087	13	FSM	ENSG00000038427.16	ENST00000502527.2	2087	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	262.016578673946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTTTTCATCATTT	147	False	NA	NA	False	NA	NA	NA	83471924	83580448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
transcript_76332.known	chr5	+	3973	7	FSM	ENSG00000038427.16	ENST00000513960.5	3973	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	50.5887558872742	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAGAAAGTACAAA	-1	True	NA	NA	False	NA	NA	NA	83471776	83539684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006
transcript_76333.known	chr5	+	1825	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	15.9499216299015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTTCTAATCATTA	13	False	NA	NA	False	AATAAA	-29	NA	83471790	83512940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
transcript_76334.nic	chr5	+	764	3	ISM	ENSG00000038427.16	ENST00000513984.5	1825	6	-304	22692	-131	6644	5prime_fragment	FALSE	canonical	3	368	junction_2	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAAGATTTGAAAGAGA	1	True	NA	16	True	NA	NA	NA	83471486	83490248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_83472024_83483512_83483589_83490097
transcript_76335.known	chr5	+	498	2	FSM	ENSG00000038427.16	ENST00000503923.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGGTGTTAATTGAA	33	False	NA	NA	False	CATAAA	-18	NA	83471617	83483604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_83472024_83483512
transcript_76336.known	chr5	-	4849	5	FSM	ENSG00000145681.11	ENST00000274341.9	4849	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.80788655293195	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTCTTCTCTTTAGC	0	True	NA	NA	False	ATTAAA	-21	NA	83720855	83637804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83641786_83644362_83644666_83652452_83652825_83673423_83673550_83720788
transcript_76339.known	chr5	-	4814	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_9	64.6857016658241	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATTGTCTGAATGTGA	1	True	NA	-13	True	ATTAAA	-17	NA	84384880	83940553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_7634.known	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	92.5021020782171	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	-4	True	NA	15	True	AATAAA	-11	NA	155689082	155738526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_76341.known	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	34.5960819875443	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-4	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
transcript_76343.nic	chr5	-	840	4	ISM	ENSG00000164176.13	ENST00000296591.10	4814	11	405	239455	-89	-73349	5prime_fragment	FALSE	canonical	3	100	junction_2	69.0619689522067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACACAAAACTGCCACC	-9	True	NA	NA	False	NA	NA	NA	84384475	84180008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_84180522_84229854_84229885_84254083_84254213_84384307
transcript_76345.known	chr5	+	265	4	FSM	ENSG00000250320.7	ENST00000515688.6	703	4	96	342	-16	-342	multi-exon	FALSE	canonical	2	3	junction_1	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAGTGGCTCATGC	38	False	NA	NA	False	NA	NA	NA	84384555	84417316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_84384600_84387821_84387937_84399584_84399653_84417278
transcript_76346.known	chr5	+	3389	2	FSM	ENSG00000250320.7	ENST00000670929.1	3389	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGTGTTTTTACA	1986	False	NA	NA	False	TATAAA	-36	NA	84384408	84391019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_84384600_84387821
transcript_76349.known	chr5	+	347	3	FSM	ENSG00000127184.13	ENST00000515763.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6104.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	4	False	NA	29	True	AATAAA	-14	NA	86617972	86620766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618131_86619352_86619443_86620667
transcript_76350.known	chr5	+	629	3	FSM	ENSG00000127184.13	ENST00000247655.4	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	11882	junction_2	172.5	5279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTATTTCTATGA	5	True	NA	11	True	AATAAA	-18	NA	86617940	86620962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618131_86619352_86619497_86620667
transcript_76352.known	chr5	+	369	3	FSM	ENSG00000127184.13	ENST00000511472.5	369	3	0	0	0	0	multi-exon	TRUE	canonical	3	1032	junction_1	5425	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	-8	True	NA	29	True	AATAAA	-14	NA	86617927	86620766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618054_86619352_86619497_86620667
transcript_76355.known	chr5	+	1584	2	FSM	ENSG00000127184.13	ENST00000509578.1	1584	2	0	0	0	0	multi-exon	FALSE	canonical	3	12227	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTTAATGCCTCTT	20	False	NA	24	True	AATAAA	-9	NA	86617955	86620761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_86618131_86619352
transcript_76357.known	chr5	+	4746	25	FSM	ENSG00000145715.15	ENST00000274376.11	4746	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	31.6095702368057	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGATTACTTCTGTCTA	25	True	NA	18	True	AATAAA	-19	NA	87267882	87391916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_87268991_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87389392_87389528_87390799
transcript_76361.known	chr5	-	1497	9	FSM	ENSG00000134480.16	ENST00000504878.1	1497	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	124.285709154351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-3	True	NA	-11	True	AATAAA	-15	NA	87412904	87394273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412434
transcript_76362.known	chr5	-	1280	9	FSM	ENSG00000134480.16	ENST00000256897.9	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	28.6966897045635	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	91	False	87412958	-11	True	AATAAA	-15	NA	87412930	87394273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412677
transcript_76368.nic	chr5	+	843	7	NIC	ENSG00000247828.9	novel	1316	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	39.316733785445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	NA	False	NA	7	True	AATAAA	-19	NA	88268867	88287653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88283009_88283087_88285740_88285852_88287435
transcript_76376.nic	chr5	+	763	6	FSM	ENSG00000247828.9	ENST00000688523.1	717	6	-50	4	0	-2	multi-exon	FALSE	canonical	3	15	junction_4	38.1418405428999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	NA	False	NA	7	True	AATAAA	-19	NA	88268867	88287653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_7638.nic	chr1	-	821	4	ISM	ENSG00000116580.20	ENST00000471341.5	5097	20	3	57663	0	0	5prime_fragment	FALSE	canonical	3	68	junction_3	4.64279609239471	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	-13	True	NA	NA	False	AAGAAA	-10	NA	155857214	155822446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155822477_155826836_155827029_155853275_155853807_155857146
transcript_76380.known	chr5	+	711	6	FSM	ENSG00000247828.9	ENST00000662970.2	715	6	0	4	0	-2	multi-exon	FALSE	canonical	3	10	junction_4	39.2295806758115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	-21	True	NA	7	True	AATAAA	-19	NA	88269014	88287653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_76387.known	chr5	+	553	5	FSM	ENSG00000247828.9	ENST00000668037.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	40.2018345352547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	28	False	NA	9	True	AATAAA	-21	NA	88269063	88287655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88287435
transcript_76389.known	chr5	+	5261	4	FSM	ENSG00000247828.9	ENST00000669353.1	5261	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	44.7288124888943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTCTATTGTTT	0	True	NA	-19	True	NA	NA	NA	88268916	88287627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282602
transcript_7639.nic	chr1	-	817	4	ISM	ENSG00000116580.20	ENST00000361040.9	5118	21	-18	58020	-5	0	5prime_fragment	FALSE	canonical	3	25	junction_3	23.7954243967663	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	-21	True	NA	NA	False	AAGAAA	-10	NA	155857222	155822446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155822477_155826836_155827029_155853275_155853807_155857158
transcript_76392.nnic	chr5	+	682	4	FSM	ENSG00000247828.9	ENST00000689901.1	620	4	-65	3	0	0	multi-exon	FALSE	canonical	1	4	junction_3	48.8330489183981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTGGTTTCTTGTGA	NA	False	NA	25	True	AATAAA	-44	NA	88268867	88436669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88436272
transcript_76394.known	chr5	+	3379	4	FSM	ENSG00000247828.9	ENST00000658478.1	3379	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	28.5462587546755	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGAATAAATCAATGT	-26	True	NA	NA	False	NA	NA	NA	88268890	88439332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88410072_88410195_88436272
transcript_76396.known	chr5	+	4644	4	FSM	ENSG00000247828.9	ENST00000660783.1	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	44.6119067315243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTAAGTAACTTT	-21	True	NA	NA	False	NA	NA	NA	88269014	88287016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282602
transcript_764.known	chr1	+	1734	5	FSM	ENSG00000132879.14	ENST00000376762.8	1734	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	56.7334777710657	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	19	True	NA	17	True	AATAAA	-18	NA	11654909	11662291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_76400.known	chr5	+	3315	4	FSM	ENSG00000247828.9	ENST00000671394.1	3315	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	28.0752955856608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAATGCAAGACCAGTG	-21	True	NA	NA	False	NA	NA	NA	88269014	88439300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88410072_88410195_88436272
transcript_76401.known	chr5	+	5642	4	FSM	ENSG00000247828.9	ENST00000659938.1	5642	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	51.6978400580398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGAAAAGTGGAAATCTC	0	True	NA	NA	False	AATAGA	-31	NA	88269035	88286977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88269467_88270586_88282041_88282107_88282602
transcript_76402.known	chr5	+	3439	3	FSM	ENSG00000247828.9	ENST00000661377.2	3521	3	82	0	20	0	multi-exon	FALSE	canonical	3	90	junction_1	14.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTACAAAATTA	36	True	NA	NA	False	NA	NA	NA	88268952	88285345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88282041
transcript_76403.known	chr5	+	585	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	48	0	1	0	multi-exon	FALSE	canonical	3	29	junction_2	30.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	-1	True	NA	41	True	AATAAA	-37	NA	88268915	88436685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525_88270586_88436272
transcript_76405.known	chr5	+	3391	3	FSM	ENSG00000247828.9	ENST00000659005.2	3454	3	63	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCCCCATCTGTACAAA	-1	True	NA	NA	False	NA	NA	NA	88269077	88285330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041
transcript_76406.known	chr5	+	552	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	0	6	0	-1	multi-exon	FALSE	canonical	3	29	junction_2	30	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	-12	True	NA	24	True	AATAAA	-43	NA	88269023	88436668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88436272
transcript_76407.known	chr5	+	2562	2	FSM	ENSG00000247828.9	ENST00000656903.1	2562	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTACAAAAATATAAAAA	14	True	NA	NA	False	NA	NA	NA	88268930	88272990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269028_88270525
transcript_76408.known	chr5	+	2715	2	FSM	ENSG00000247828.9	ENST00000655966.1	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAGAGCGAGACTATC	-21	True	NA	NA	False	NA	NA	NA	88269014	88273135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525
transcript_76409.known	chr5	+	2177	4	FSM	ENSG00000247828.9	ENST00000669796.1	2177	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	29.1013554476229	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGCATTAAATAAATAATAAA	11	True	NA	NA	False	NA	NA	NA	88269046	88284693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714
transcript_7641.nnic	chr1	-	828	4	NNC	ENSG00000116580.20	novel	471	4	NA	NA	0	-5975	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	30.1809358517739	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTGTTTAGTATGTG	-13	True	NA	NA	False	AATAAA	-12	NA	155857214	155832844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_155832951_155834281_155834405_155853275_155853807_155857146
transcript_76414.known	chr5	-	2750	12	FSM	ENSG00000164180.14	ENST00000296595.11	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_2	10.7218784588313	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATAGGACTTGTTTTA	-9	True	NA	NA	False	NA	NA	NA	88268845	88195046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_76415.nic	chr5	-	2686	12	NIC	ENSG00000164180.14	novel	2750	12	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	21.3986173956702	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTAAAGTTTTATGG	NA	False	NA	26	True	NA	NA	NA	88268970	88195168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268787
transcript_76417.nic	chr5	-	2527	11	NIC	ENSG00000164180.14	novel	2750	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_10	18.3806963959476	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTAAAGTTTTATGG	-12	True	NA	26	True	NA	NA	NA	88268848	88195168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88268720
transcript_76419.nic	chr5	-	2498	11	NIC	ENSG00000164180.14	novel	2750	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	21.6723325925014	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTAAGCAATTTATT	-14	True	NA	-12	True	ATTAAA	-18	NA	88268850	88195206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_88196489_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_7642.nnic	chr1	-	824	4	NNC	ENSG00000116580.20	novel	471	4	NA	NA	-5	-5975	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	9.93310961716756	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTGTTTAGTATGTG	-21	True	NA	NA	False	AATAAA	-12	NA	155857222	155832844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_155832951_155834281_155834405_155853275_155853807_155857158
transcript_76427.known	chr5	-	1250	9	FSM	ENSG00000164180.14	ENST00000507872.1	1250	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	23.0349598436811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTGGCTATTGTTC	17	True	NA	NA	False	NA	NA	NA	88268819	88202683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_88203076_88205813_88205955_88206438_88206500_88207028_88207143_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_76432.known	chr5	+	713	4	FSM	ENSG00000248309.8	ENST00000514158.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGATGGTAATGTGTTC	14	True	NA	NA	False	AATAAA	-19	NA	88889459	88941370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_88889481_88905208_88905271_88905701_88905774_88940812
transcript_76433.known	chr5	-	1026	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	272.410425644835	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAAATTTGTTTTTAT	-1	True	NA	0	True	AATAAA	-27	NA	90409757	90393709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_76434.known	chr5	-	2406	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	34.1275182221034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAGTCTTCTGTGA	0	True	NA	NA	False	AATAAA	-19	NA	90409756	90392256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_76444.known	chr5	+	763	8	FSM	ENSG00000113356.13	ENST00000503373.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	324.762519200648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTAGGCATGAAATT	NA	False	NA	NA	False	NA	NA	NA	90474260	90512129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90474319_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_76445.known	chr5	+	3290	8	FSM	ENSG00000113356.13	ENST00000651687.1	3290	8	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	154.865576997522	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTTAATGATTATTCA	4	True	NA	NA	False	AATAAA	-22	NA	90474863	90514557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_76449.known	chr5	+	3251	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	181.576767371213	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	-6	True	NA	NA	False	AATAAA	-18	NA	90474888	90514553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_76470.known	chr5	+	682	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	368.859804743693	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	0	True	NA	93	True	CATAAA	-20	NA	90474894	90490858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
transcript_76471.nic	chr5	+	642	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	-19	-80	combination_of_known_junctions	FALSE	canonical	3	120	junction_3	372.578701603955	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTTATATGTGCCTA	NA	False	NA	13	True	AATAAA	-18	NA	90474844	90490778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
transcript_76473.known	chr5	-	4277	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATCTATAATTGATAT	4	True	NA	-32	True	AATAAA	-15	NA	90474771	90458208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90461553_90473838
transcript_76479.nnic	chr5	+	1554	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-99	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	36.9710311305641	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929140	91164216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_7648.nnic	chr1	+	3009	4	NNC	ENSG00000132718.9	novel	5182	4	NA	NA	-46	-2228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.2836838484589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGACTGAGTGAATGA	-2	True	NA	NA	False	AATAAA	-23	NA	155859520	155882971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_155859796_155867964_155868792_155880499_155880624_155881188
transcript_76480.nic	chr5	+	1618	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	36.9710311305641	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929161	91164216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_76481.nic	chr5	+	1631	8	NIC	ENSG00000164199.18	novel	564	4	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	42.7579805177838	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929411	91164216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90929662_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_76482.nnic	chr5	+	1362	7	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	51.2144185426982	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929140	91164216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_76483.nic	chr5	+	1343	7	NIC	ENSG00000164199.18	novel	893	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_5	51.2144185426982	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929244	91164216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_76485.known	chr5	+	2221	6	FSM	ENSG00000164199.18	ENST00000638316.1	2221	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.85657137141714	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATAAATAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	90558685	90626582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129
transcript_76486.nnic	chr5	+	1108	6	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	53.9614677339303	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929216	91164216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_76488.known	chr5	+	893	6	FSM	ENSG00000164199.18	ENST00000639821.1	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	53.9614677339303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGCTTTTGTGCTAAA	NA	False	NA	NA	False	NA	NA	NA	90929239	91163939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_7649.known	chr1	+	5182	4	FSM	ENSG00000132718.9	ENST00000368324.5	5182	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.2836838484589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGTCAGCCTGATTC	4	True	NA	17	True	AATAAA	-24	NA	155859566	155885199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_155859796_155867964_155868792_155880499_155880624_155881197
transcript_76491.known	chr5	-	4262	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	4	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCCAGTGAATTTAAT	-26	True	NA	-2	True	AATAAA	-23	NA	90529584	90515625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_90519485_90525034_90525301_90529447
transcript_76495.known	chr5	-	4239	8	FSM	ENSG00000113369.9	ENST00000265138.4	4239	8	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_4	15.2569823426548	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGGTAAGAATTGTATC	-7	True	NA	92	True	ATTAAA	-29	NA	91383317	91368630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_91371457_91373683_91373839_91374113_91374277_91374921_91375179_91375510_91375614_91376620_91376769_91378693_91378776_91382812
transcript_76499.nnic	chr5	-	1288	5	NNC	ENSG00000249776.5	novel	511	4	NA	NA	-115222	7989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.48746859276655	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTACTTCTT	517	False	NA	NA	False	ATTAAA	-22	NA	92776085	92424213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_92425022_92507347_92507466_92669751_92669897_92671483_92671594_92775978
transcript_765.nic	chr1	+	2052	5	NIC	ENSG00000132879.14	novel	1734	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	142	junction_3	41.8173110087198	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	442	False	NA	17	True	AATAAA	-18	NA	11654855	11662291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_11654953_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_76502.known	chr5	-	591	2	FSM	ENSG00000237187.9	ENST00000607195.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGGAAAAGTATATTC	NA	False	NA	-16	True	AATAAA	-4	NA	93422423	93411032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_93411510_93422309
transcript_76506.known	chr5	-	4684	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	10.3266645147405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGAGTTTAAGTTGC	-9	True	NA	NA	False	AATAAA	-18	NA	94111663	93617724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_76509.known	chr5	-	1369	10	FSM	ENSG00000113391.19	ENST00000509163.5	1369	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	11.8112731252607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCGAGCGGACTC	-22	True	NA	NA	False	NA	NA	NA	94111676	93620928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94111510
transcript_76511.known	chr5	-	2262	5	FSM	ENSG00000185261.15	ENST00000329378.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	3.34477204006491	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAATTTTCAAATTGT	-28	True	NA	7	True	AATAAA	-26	NA	94618597	94519205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
transcript_76514.known	chr5	+	5583	21	FSM	ENSG00000133302.13	ENST00000265140.10	5583	21	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_7	11.9719463747546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGCTTTTCCCCATGC	-9	True	NA	NA	False	AATAAA	-29	NA	94618668	94697621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
transcript_7652.known	chr1	-	2419	7	FSM	ENSG00000143622.11	ENST00000651853.1	2419	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.127660648068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGAGTAGTGGTCCCT	-12	True	NA	-93	True	GATAAA	-37	NA	155911404	155898836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155900619_155904310_155904503_155904602_155904606_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_76522.nic	chr5	+	1073	8	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-32	44288	-32	-1418	5prime_fragment	FALSE	canonical	3	74	junction_7	15.8449116277055	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAAGAAAGCAATT	296	False	NA	NA	False	AAAAAG	-44	NA	94618636	94653333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271
transcript_76523.nic	chr5	+	936	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-32	45851	-32	-2981	5prime_fragment	FALSE	canonical	3	105	junction_5	7.1278015934477	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGGTTCCAGTAAAGA	296	False	NA	-65	True	AAAAAG	-6	NA	94618636	94651770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_76524.nic	chr5	+	1011	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-32	45776	-32	-2906	5prime_fragment	FALSE	canonical	3	105	junction_5	7.1278015934477	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAACTTTCCAAATTAAA	296	False	NA	10	True	NA	NA	NA	94618636	94651845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_76525.nic	chr5	+	866	6	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-32	48025	-32	-5155	5prime_fragment	FALSE	canonical	3	105	junction_5	7.2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACTTTATAGGCTGAA	296	False	NA	NA	False	AATGAA	-34	NA	94618636	94649596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453
transcript_76526.known	chr5	-	5677	43	FSM	ENSG00000198677.12	ENST00000358746.7	5677	43	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_21	26.6015467642285	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTTATAGTGT	3	True	NA	-13	True	AATAAA	-15	NA	95554977	95463893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95464682_95467865_95467990_95469779_95469911_95478289_95478443_95482472_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963_95495018_95497415_95497489_95498369_95498592_95502879_95503004_95503813_95503939_95506933_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95516587_95516671_95516751_95516915_95517061_95517145_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_76529.nic	chr5	-	2269	19	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-23	58194	-23	0	5prime_fragment	FALSE	canonical	3	159	junction_6	19.7687245197004	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGAAGATTATGT	NA	False	NA	NA	False	AATATA	-33	NA	95555000	95522087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_76530.nic	chr5	-	2545	10	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-23	71421	-23	1209	5prime_fragment	FALSE	canonical	3	167	junction_2	23.8937979452182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTGCTGTTACCTT	NA	False	NA	NA	False	NA	NA	NA	95555000	95535314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_76531.known	chr5	+	3365	8	FSM	ENSG00000164291.17	ENST00000380009.9	3365	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	11.5475945016921	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGAATGGCCTTCTCC	-9	True	NA	47	True	NA	NA	NA	95555100	95605102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561_95586734_95591400_95591626_95600846_95601072_95603236
transcript_76536.nic	chr5	+	1024	5	ISM	ENSG00000164291.17	ENST00000504873.5	1920	9	-118	17008	-36	0	5prime_fragment	FALSE	canonical	3	104	junction_3	10.4731800328267	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTAAGAATATTAGAGC	NA	False	NA	NA	False	NA	NA	NA	95555064	95586672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561
transcript_76537.known	chr5	+	1088	2	FSM	ENSG00000164291.17	ENST00000504763.1	1088	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTGCATTC	15	False	NA	NA	False	AATAAA	-35	NA	95555166	95557057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95555405_95556207
transcript_76540.known	chr5	+	2582	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	17.6113599702011	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAAATCTTCTCATC	13	True	NA	NA	False	AATAAA	-24	NA	95646776	95658082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_76547.known	chr5	+	615	5	FSM	ENSG00000175449.14	ENST00000511684.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	14.6692706021806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACACAGTGACAGTAGAC	-10	True	NA	NA	False	AATAAA	-9	NA	95646753	95656190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95646818_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_7655.known	chr1	-	3390	6	FSM	ENSG00000143622.11	ENST00000368323.8	3390	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	14.8539557021017	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCTTTCCTTTGCTTC	1	True	NA	-23	True	AATACA	-15	NA	155911349	155897807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_76553.nnic	chr5	+	2238	12	NIC	ENSG00000164292.13	novel	693	4	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	201.760106304165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACGTAGGATTAATACAGA	NA	False	NA	NA	False	ATTAAA	-10	NA	95713508	95793496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_95713591_95731858_95732085_95736888_95737076_95748332_95748488_95752238_95752351_95755395_95755762_95763507_95763621_95768045_95768167_95780251_95780426_95783796_95783964_95788761_95788859_95793058
transcript_76556.nnic	chr5	+	699	5	NIC	ENSG00000164292.13	novel	333	3	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	297.533506516493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAAAGAAAAATGAGC	NA	False	NA	1	True	NA	NA	NA	95713508	95752287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_95713591_95731858_95732085_95736888_95737076_95748332_95748488_95752238
transcript_76557.known	chr5	+	5370	12	FSM	ENSG00000164292.13	ENST00000379982.8	5370	12	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_7	69.4305051207487	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACGAAGTGTCCTGTA	-2	True	NA	75	True	AATAAA	-16	NA	95731335	95796361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238_95752351_95755395_95755762_95763507_95763621_95768045_95768167_95780251_95780426_95783796_95783964_95788761_95788859_95793058
transcript_76558.known	chr5	-	1366	3	FSM	ENSG00000173221.14	ENST00000379979.8	1366	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCCAATTCATTTG	12	True	NA	0	True	AATAAA	-24	NA	95822714	95813970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95814958_95816506_95816627_95822455
transcript_76560.known	chr5	-	632	3	FSM	ENSG00000173221.14	ENST00000505427.1	632	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTAAAATCATTTTGCT	4	True	NA	NA	False	NA	NA	NA	95822722	95814562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95814808_95816506_95816627_95822455
transcript_76561.known	chr5	-	932	3	FSM	ENSG00000173221.14	ENST00000237858.11	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	23	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTACAAATGGCT	0	True	NA	-12	True	AATAAA	-18	NA	95822726	95813848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95814390_95816506_95816627_95822455
transcript_76562.known	chr5	-	5826	12	FSM	ENSG00000118985.16	ENST00000237853.9	5826	12	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_10	22.9958673973254	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTACTTGTTTTTCCT	-7	True	NA	-8	True	AATAAA	-17	NA	95961851	95885097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913770_95913935_95919423_95919546_95943001_95943050_95961574
transcript_76565.known	chr5	-	5136	14	FSM	ENSG00000175426.11	ENST00000311106.8	5136	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.22527004511333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATCTCCCTCTTTTATT	-11	True	NA	NA	False	AAAAAG	-20	NA	96433248	96390332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_96393379_96394863_96395026_96397335_96397470_96398878_96399037_96399952_96400187_96408222_96408324_96410773_96410987_96412317_96412491_96416032_96416122_96421879_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_76568.nic	chr5	-	899	5	ISM	ENSG00000175426.11	ENST00000311106.8	5136	14	-29	31503	-29	1547	5prime_fragment	FALSE	canonical	2	6	junction_3	3.90512483795333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCTTGTTTGAGAAAA	-1	True	NA	NA	False	AATAAA	-15	NA	96433277	96421835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_76569.known	chr5	+	4263	31	FSM	ENSG00000153113.24	ENST00000675663.1	4263	31	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.794364428692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGAGGCAAAGAACAAT	14	True	NA	NA	False	NA	NA	NA	96663003	96774481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96663167_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_76570.known	chr5	+	3273	30	FSM	ENSG00000153113.24	ENST00000511049.5	3273	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.0211952120956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGAAACTTCTGCT	7	True	NA	NA	False	NA	NA	NA	96702799	96773570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96702916_96722638_96722699_96726753_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765223_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_76571.known	chr5	+	4356	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	52.1305185389434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	-4	True	NA	NA	False	ATTAAA	-18	NA	96702788	96774679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_76574.known	chr5	+	4282	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	31.961452388393	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	8	True	NA	NA	False	ATTAAA	-22	NA	96702800	96774683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_7659.known	chr1	-	919	5	FSM	ENSG00000143622.11	ENST00000539040.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	95.1482396053653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-10	True	NA	-33	True	NA	NA	NA	155911402	155900182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155911242
transcript_76591.nic	chr5	+	489	6	ISM	ENSG00000153113.24	ENST00000509903.5	2171	27	-36	40830	-11	0	5prime_fragment	FALSE	canonical	3	95	junction_1	43.2064809953322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGTGACAAGGTGAGCACA	1	True	NA	-5	True	NA	NA	NA	96702769	96730849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779
transcript_76594.known	chr5	-	4841	19	FSM	ENSG00000164307.13	ENST00000443439.7	4841	19	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	7.48001452431415	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATATTTGCAATTATTT	-20	True	NA	-4	True	AATAAA	-21	NA	96807945	96774483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_96776552_96780422_96780505_96781057_96781199_96781692_96781855_96783050_96783236_96783923_96784081_96785787_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511_96790644_96792060_96792193_96793399_96793514_96793802_96793958_96795041_96795163_96797174_96797310_96800861_96801001_96803402_96803944_96807859
transcript_76598.known	chr5	+	12134	18	FSM	ENSG00000113441.16	ENST00000231368.10	12134	18	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	3.0338345784065	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGGACTCTTTGGA	-20	True	NA	NA	False	AATAAA	-17	NA	96936079	97037513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_96936175_96979137_96979979_96985079_96985219_96986538_96986671_96993014_96993136_96993816_96993972_96996389_96996504_96998013_96998146_97003414_97003547_97006072_97006234_97006426_97006516_97013647_97013832_97014938_97015096_97022299_97022485_97024520_97024683_97026616_97026758_97027732_97027815_97028401
transcript_76599.known	chr5	-	3765	6	FSM	ENSG00000145721.12	ENST00000274382.9	3765	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.13541565040626	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTATTTGTTCA	7	True	NA	NA	False	AATAAA	-23	NA	97142611	97091866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_97095036_97096809_97096888_97105189_97105286_97107359_97107501_97124465_97124630_97142494
transcript_76605.known	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	24.5029602645965	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	1	True	NA	-1	True	AATAAA	-17	NA	97183247	97160866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_76608.known	chr5	-	2149	8	FSM	ENSG00000058729.11	ENST00000508447.1	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	26.9117984898666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTGAATTTTCTC	26	True	NA	NA	False	AATAAA	-19	NA	97183222	97166745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_76609.known	chr5	-	8145	36	FSM	ENSG00000153922.11	ENST00000614616.5	8145	36	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_28	26.5430570498392	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGCCTGTTTGCTTAT	-5	True	NA	NA	False	AATAAA	-16	NA	98929007	98853984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869753_98869883_98870686_98870804_98872050_98872202_98872416_98872556_98873592_98873724_98875071_98875114_98876397_98876559_98879551_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_76610.known	chr5	+	1287	3	FSM	ENSG00000174132.9	ENST00000312637.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCAAATTATGTGTTT	19	True	NA	20	True	AATAAA	-23	NA	100535373	100586741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_100535965_100562053_100562189_100586180
transcript_76611.known	chr5	-	6321	5	FSM	ENSG00000113532.13	ENST00000231461.10	6321	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	10.7819293264239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTATATCCATTTTAT	-11	True	NA	NA	False	AATAAA	-18	NA	100903282	100806932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_100812130_100856102_100856397_100886342_100886601_100895653_100895786_100902842
transcript_76614.nnic	chr5	-	1529	5	NNC	ENSG00000113532.13	novel	1794	3	NA	NA	-7	36251	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	22.3313120975907	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCTTTAAAGTCATTT	-18	True	NA	-16	True	AATAAA	-18	NA	100903289	100849059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_100849458_100856102_100856397_100886342_100886601_100895653_100895786_100902842
transcript_76618.known	chr5	-	1794	3	FSM	ENSG00000113532.13	ENST00000451528.2	1794	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTTCCTTTTCTCTCT	57	False	NA	1	True	AATAAA	-21	NA	100903214	100885310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_100886601_100895653_100895786_100902842
transcript_76622.known	chr5	-	5069	13	FSM	ENSG00000173930.9	ENST00000310954.7	5069	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	6.13901457890434	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTGTTTGAGCTTATT	8	True	NA	0	True	ATTAAA	-20	NA	102296284	102233985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_102237019_102239250_102239389_102240717_102240783_102247251_102247443_102249637_102249789_102257114_102257311_102257942_102258088_102260212_102260320_102261911_102262034_102263683_102263781_102270623_102270807_102291342_102291607_102295907
transcript_76623.known	chr5	-	944	2	FSM	ENSG00000250682.6	ENST00000510145.1	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAAGGAGGCAGAATG	NA	False	NA	NA	False	NA	NA	NA	102671559	102609155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_102609767_102671226
transcript_76625.known	chr5	-	3549	8	FSM	ENSG00000145723.17	ENST00000399004.7	3549	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	8.59995253902424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-13	True	NA	0	True	AATAAA	-19	NA	103120138	103085999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_76630.known	chr5	-	1040	5	FSM	ENSG00000145723.17	ENST00000508629.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.8464187579497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTGACACATTCTTAA	28	False	NA	-2	True	ATTAAA	-18	NA	103120097	103087812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103088173_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_76632.known	chr5	+	15407	30	FSM	ENSG00000145725.20	ENST00000321521.13	15407	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	43.0001244363988	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTAGTTGTTTATTT	NA	False	NA	7	True	AGTAAA	-22	NA	103120199	103212799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
transcript_76634.known	chr5	+	2988	3	FSM	ENSG00000181751.10	ENST00000319933.7	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	13.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	0	True	NA	10	True	AATAAA	-15	NA	103258762	103278660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_103258897_103265907_103265998_103275896
transcript_76637.known	chr5	+	1573	3	FSM	ENSG00000181751.10	ENST00000515669.5	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	66	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGATACAAAGTATTTA	-10	True	NA	6	True	AATAAA	-7	NA	103259035	103277228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_103259187_103265907_103265998_103275896
transcript_76641.known	chr5	-	3488	7	FSM	ENSG00000112874.10	ENST00000230792.7	3488	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	13.0128141972954	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	1	True	NA	-2	True	ATTAAA	-14	NA	103562789	103548854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
transcript_76642.known	chr5	-	1781	7	FSM	ENSG00000112874.10	ENST00000507423.1	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	25.491283913439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTGATGATGAAGAAA	1	True	NA	NA	False	CATAAA	-22	NA	103562789	103550507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560255_103562702
transcript_76648.nnic	chr5	+	976	3	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	12	True	AATAAA	-18	NA	106978836	106984046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_+_106979187_106980711_106980920_106983628
transcript_76650.nnic	chr5	-	1601	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1463	-209	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATTGTGAGGACCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	106982332	106815414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_106815547_106980763_106980871_106980970
transcript_76654.known	chr5	-	602	3	FSM	ENSG00000251027.2	ENST00000505997.1	602	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCATCTGAATGGCTT	NA	False	NA	-8	True	ATTAAA	-12	NA	106980869	106815204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_106815547_106844060_106844215_106980763
transcript_76655.known	chr5	-	436	1	FSM	ENSG00000272523.1	ENST00000606054.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAATCATTGCTCTTTGT	26	True	NA	-11	True	ATTAAA	-19	NA	108728260	108727824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_108727800_108728300
transcript_76658.nnic	chr5	+	2698	19	NIC	ENSG00000151422.14	novel	3132	18	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	7.27438428093173	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCGACAGTCTTCTACCA	491	False	NA	7	True	AATGAA	-15	NA	108748915	109187667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_108748994_108798123_108798390_108832769_108832944_108835707_108835808_108867766_108867951_108871364_108871503_108872092_108872213_108883395_108883519_108897658_108897849_108946129_108946223_108954728_108954933_108959224_108959348_109037421_109037479_109044679_109044796_109047103_109047199_109100395_109100520_109180746_109180902_109186199_109186323_109187432
transcript_76671.known	chr5	-	4856	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_6	20.15556780595	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTCTAATATTTAATT	-7	True	NA	-18	True	AATAAA	-17	NA	109409974	109334721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
transcript_76674.nic	chr5	-	1398	4	ISM	ENSG00000198961.10	ENST00000361189.7	4856	10	-19	43606	-19	839	5prime_fragment	FALSE	canonical	3	372	junction_2	3.09120616516523	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAACAGAAAATAACCAA	6	True	NA	-18	True	NA	NA	NA	109409993	109378327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_109379255_109381502_109381704_109383402_109383521_109409841
transcript_76675.known	chr5	+	6553	22	FSM	ENSG00000112893.10	ENST00000261483.5	6553	22	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	44.5094705711216	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCCTCTAGAGTAGTT	-1	True	NA	18	True	AATAAA	-19	NA	109689926	109869625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668_109819888_109820219_109820343_109823722_109823838_109842327_109842462_109845864_109846007_109847656_109847791_109855139_109855335_109865035_109865147_109866845
transcript_76678.known	chr5	+	4745	8	FSM	ENSG00000164209.17	ENST00000355943.8	4745	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	25.1777355484352	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTTTTTCTCCTACT	-13	True	NA	10	True	AATAAA	-14	NA	110739006	110765157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203
transcript_7668.known	chr1	-	2961	14	FSM	ENSG00000132680.11	ENST00000368321.8	2961	14	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	36.2373830318096	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-5	True	NA	-8	True	AATAAA	-14	NA	155934413	155913044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_76681.nic	chr5	+	1764	5	ISM	ENSG00000164209.17	ENST00000447245.6	1575	8	-42	12921	-8	-7688	5prime_fragment	FALSE	canonical	3	193	junction_3	10.4970233876085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAATTGAAGCACAGGG	-21	True	NA	NA	False	AGTAAA	-11	NA	110738998	110749343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162
transcript_76683.known	chr5	+	6416	23	FSM	ENSG00000134987.13	ENST00000513710.4	6416	23	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	30.7536532802632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTTTACTTTTGTTA	0	True	NA	9	True	AATAAA	-16	NA	111092347	111130502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169_111111279_111113073_111113154_111119012_111119121_111120495_111120594_111120995_111121142_111123804_111123925_111124107_111124190_111125607_111125796_111126733
transcript_76688.nic	chr5	+	1439	12	ISM	ENSG00000134987.13	ENST00000505303.5	2126	15	-7	4143	-7	3549	5prime_fragment	FALSE	canonical	3	195	junction_7	34.1794003013318	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTGAAGAAAGATGACAT	-34	True	NA	NA	False	NA	NA	NA	111092313	111107409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293
transcript_76689.known	chr5	+	2411	2	FSM	ENSG00000145777.15	ENST00000379706.4	2411	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAGCATATAAAGTTG	-1	True	NA	NA	False	AATAAA	-19	NA	111073313	111078024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_111073646_111075945
transcript_76690.known	chr5	+	562	2	FSM	ENSG00000134987.13	ENST00000515784.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTCATTTAGAATGT	-1	True	NA	NA	False	NA	NA	NA	111092346	111095209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_111092619_111094919
transcript_76693.known	chr5	-	803	6	FSM	ENSG00000164211.13	ENST00000505803.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	84.2624471517413	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATACATTCAAACTTGT	-1	True	NA	NA	False	NA	NA	NA	111512562	111499881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512390
transcript_76698.known	chr5	-	1135	5	FSM	ENSG00000164211.13	ENST00000511137.5	1135	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	102.691284927203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAATTTAAAATGTGGAA	-19	True	NA	NA	False	NA	NA	NA	111512535	111499401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111500107_111501001_111501117_111506329_111506380_111507328_111507443_111512384
transcript_767.nic	chr1	-	1028	5	ISM	ENSG00000116661.11	ENST00000354287.5	1287	6	3743	0	27	0	3prime_fragment	FALSE	canonical	3	404	junction_3	16.2326830807479	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAATGAAAAAATGGA	4132	False	NA	-39	True	AATAAA	-19	NA	11650686	11648386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465
transcript_76701.known	chr5	-	1467	5	FSM	ENSG00000164211.13	ENST00000502322.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	6.28490254498827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATTAATAGTGCTA	453	False	NA	NA	False	TTTAAA	-44	NA	111512590	111500146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
transcript_76708.known	chr5	-	801	5	FSM	ENSG00000134986.14	ENST00000515855.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	831.667000667936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTAGTAGTTTATGT	-6	True	NA	NA	False	NA	NA	NA	111757194	111730516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111734669_111734743_111735429_111735508_111755769_111755831_111757135
transcript_76711.known	chr5	-	2065	5	FSM	ENSG00000134986.14	ENST00000446294.6	2065	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	722.569503577338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAAGGTAACTGTCTG	598	False	NA	-27	True	AATAAA	-7	NA	111757470	111729315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757319
transcript_76712.known	chr5	-	704	5	FSM	ENSG00000134986.14	ENST00000419114.6	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	781.025447728818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACGTTTACAACCCTT	-1	True	NA	70	True	NA	NA	NA	111757555	111730703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757377
transcript_76713.known	chr5	-	2581	5	FSM	ENSG00000134986.14	ENST00000379671.7	2581	5	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_4	555.901969775247	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTCATTAAGGCTTA	11	True	NA	NA	False	GATAAA	-15	NA	111757724	111728811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757561
transcript_76715.known	chr5	-	475	5	FSM	ENSG00000134986.14	ENST00000508161.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	774.191675232949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGTGAACCGCAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	111758203	111731026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757931
transcript_76716.known	chr5	-	698	5	FSM	ENSG00000134986.14	ENST00000455559.6	698	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	708.93630708266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCTTGCTTTAGAGAA	NA	False	NA	-32	True	AAGAAA	-11	NA	111758218	111730805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757944
transcript_76719.known	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1610	junction_3	147.741516018875	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-6	True	NA	-14	True	AATAAA	-20	NA	111757194	111729302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
transcript_76721.known	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	940	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	839	False	NA	NA	False	NA	NA	NA	111757229	111730641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111731047_111735429_111735508_111757135
transcript_76723.known	chr5	-	1079	2	FSM	ENSG00000134986.14	ENST00000503429.1	1079	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGTCAAGGTTGAAATC	-6	True	NA	NA	False	AAGAAA	-38	NA	111757194	111734487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111735508_111757135
transcript_76724.known	chr5	-	503	2	FSM	ENSG00000134986.14	ENST00000513684.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	1610	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGTATATGCTATCC	904	False	NA	NA	False	NA	NA	NA	111757164	111755356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_111755831_111757135
transcript_76725.known	chr5	-	4670	23	FSM	ENSG00000129595.14	ENST00000261486.6	4670	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	3.96054925650763	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATTTGTCGTTTCCTGC	-4	True	NA	-1	True	AATAAA	-20	NA	112419277	112162618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_112165119_112168738_112168821_112168994_112169106_112170300_112170370_112170944_112170993_112184015_112184136_112194567_112194646_112195660_112195709_112204374_112204489_112205420_112205505_112209891_112209983_112234633_112234756_112239659_112239738_112240718_112240811_112259228_112259293_112259890_112259980_112262493_112262582_112264895_112265017_112266232_112266331_112275325_112275405_112280271_112280324_112307385_112307491_112418940
transcript_76727.known	chr5	+	3511	3	FSM	ENSG00000224032.8	ENST00000663232.1	3511	3	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	28	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGATAACATCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112160525	112164818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112161702_112161776_112162150
transcript_76728.known	chr5	+	292	3	FSM	ENSG00000224032.8	ENST00000508590.2	366	3	70	4	62	1	multi-exon	FALSE	canonical	2	33	junction_1	215.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTGTTTTAAGTGA	32	False	NA	36	True	AATAAA	-17	NA	112160933	112162311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112160992_112161702_112161776_112162150
transcript_76729.known	chr5	+	1367	2	FSM	ENSG00000224032.8	ENST00000427306.3	1373	2	0	6	0	-6	multi-exon	FALSE	canonical	3	408	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACTTTGGCATTTGTGT	NA	False	NA	27	True	AATAAA	-8	NA	112160528	112162302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112161702
transcript_7673.known	chr1	-	911	6	FSM	ENSG00000132680.11	ENST00000466713.1	911	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	16.0549057923116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCCCAGCTACTTGGGA	10	True	NA	NA	False	NA	NA	NA	155934398	155926470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_76731.known	chr5	+	2621	3	FSM	ENSG00000224032.8	ENST00000413221.7	2621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	232	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATGCAGTCTGAAAG	1	True	NA	NA	False	AATAAA	-28	NA	112160871	112164257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112161685_112161776_112162150
transcript_76732.known	chr5	+	578	2	FSM	ENSG00000224032.8	ENST00000442823.3	605	2	27	0	20	0	multi-exon	FALSE	canonical	2	27	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGATTAACTGCCAGAA	21	False	NA	49	True	AATAAA	-30	NA	112160891	112162324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112161296_112162150
transcript_76737.nic	chr5	+	853	5	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	0	8334	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	11.7898261225516	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGGAAAAAGACTG	-11	True	NA	NA	False	TTTAAA	-42	NA	112707497	112775656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_76739.nic	chr5	+	1472	2	ISM	ENSG00000134982.17	ENST00000505350.1	573	3	-23	10424	0	-10424	5prime_fragment	FALSE	canonical	3	33	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCCTTTATAAAAAAA	-11	True	NA	NA	False	AATATA	-32	NA	112707497	112755959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_112707883_112754872
transcript_7674.nic	chr1	-	1347	5	NIC	ENSG00000132680.11	novel	911	6	NA	NA	-19	138	intron_retention	FALSE	canonical	3	200	junction_2	9.53939201416946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGCCAAGTAATA	8494	False	NA	NA	False	NA	NA	NA	155934432	155926332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_76742.known	chr5	+	937	5	FSM	ENSG00000153037.15	ENST00000282999.7	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	305.142077563878	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGGAGAGGAGGGATAAT	-2	True	NA	56	True	AATAAA	-41	NA	112861304	112867935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867371
transcript_76743.known	chr5	+	2776	5	FSM	ENSG00000153037.15	ENST00000505459.6	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_3	338.070258969937	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAAGGTGCCTGC	-20	True	NA	NA	False	NA	NA	NA	112861286	112869788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867403
transcript_76744.known	chr5	+	1850	5	FSM	ENSG00000153037.15	ENST00000391338.3	1850	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	451.858592371552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTTTTGTTCTTAAAAA	-2	True	NA	NA	False	AATAGA	-34	NA	112861304	112893079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112891602
transcript_76746.known	chr5	-	3008	5	FSM	ENSG00000129625.13	ENST00000379638.9	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_1	25.7342184649155	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATTTCATTTTATT	29	True	NA	-12	True	AATAAA	-32	NA	112922227	112876384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112922072
transcript_7675.nic	chr1	-	653	2	ISM	ENSG00000132680.11	ENST00000491599.1	773	3	-32	1021	-19	-1021	5prime_fragment	FALSE	canonical	3	224	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTTTGTAATCCTGTA	8494	False	NA	NA	False	NA	NA	NA	155934432	155933293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_155933850_155934335
transcript_76752.known	chr5	+	1270	4	FSM	ENSG00000153037.15	ENST00000621420.5	1270	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	739.573901348307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTGTTTGTTTGTTTG	18	True	NA	1	True	AGTAAA	-13	NA	112861324	112868392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112861418_112862507_112862584_112864620_112864733_112867403
transcript_76759.nic	chr5	-	4602	17	NIC	ENSG00000171444.18	novel	8257	17	NA	NA	-30	888	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	19.7443623282698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTCACTATTTTTCC	3	True	NA	NA	False	AAAACA	-22	NA	113203347	113025243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
transcript_76760.known	chr5	-	857	6	FSM	ENSG00000171444.18	ENST00000506605.6	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	30.261526729496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGCATCCATAATGGT	-2	True	NA	NA	False	NA	NA	NA	113203317	113101733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
transcript_76764.known	chr5	+	4679	12	FSM	ENSG00000172795.17	ENST00000674880.1	4679	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	100.386937347857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTATCCTATAGAAAAG	15	True	NA	55	True	TATAAA	-9	NA	112976812	113016649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112981041_112981172_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_76765.known	chr5	+	10110	11	FSM	ENSG00000172795.17	ENST00000389063.3	10110	11	0	0	0	0	multi-exon	FALSE	canonical	2	184	junction_10	35.5589651142999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATATCAAATAACGCAA	0	True	NA	NA	False	AATAAA	-20	NA	112976797	113022195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_76770.known	chr5	+	1572	9	FSM	ENSG00000172795.17	ENST00000513585.6	1572	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	91.2790193582293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGTATATTGGAGTTT	-1	True	NA	NA	False	NA	NA	NA	112976709	113013849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_76773.known	chr5	+	8029	10	FSM	ENSG00000172795.17	ENST00000515408.5	8029	10	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_8	85.877317029859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGCAAATTATTTTGAG	NA	False	NA	NA	False	AAAAAG	-25	NA	112976701	113020123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113010755_113010808_113013320
transcript_76775.nnic	chr5	+	825	3	NIC	ENSG00000172795.17	novel	852	2	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	89	False	NA	13	True	ATTAAA	-14	NA	112976969	112984651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_112976987_112981041_112981172_112983973
transcript_76778.known	chr5	+	852	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	15	True	NA	13	True	ATTAAA	-14	NA	112976812	112984651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_112976987_112983973
transcript_76782.known	chr5	-	4156	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	9.46337971105226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAATTCATGTGTA	-3	True	NA	-25	True	AATAAA	-37	NA	115169908	115124771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
transcript_76787.known	chr5	-	693	2	FSM	ENSG00000152503.10	ENST00000379618.6	693	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTCTCGCTACAGCT	26	False	NA	0	True	AATAAA	-26	NA	115180546	115171101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115171223_115179974
transcript_76791.known	chr5	-	9550	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_5	23.5411873107539	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTCAAATGGATTTC	-8	True	NA	-9	True	AATAAA	-22	NA	115262877	115204011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_768.known	chr1	+	1444	6	FSM	ENSG00000116663.11	ENST00000376753.9	1444	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	2.41660919471891	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGGGTTGGTTTTA	-13	True	NA	NA	False	AATAAA	-30	NA	11664199	11674354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11664256_11668655_11668945_11671265_11671393_11671927_11672024_11673276_11673413_11673614
transcript_76801.known	chr5	+	944	1	FSM	ENSG00000271797.1	ENST00000606615.1	944	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGACTGCTTGCGTCATT	NA	False	NA	NA	False	NA	NA	NA	115262504	115263448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_115262500_115263400
transcript_76802.known	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	31.927386750114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-7	True	NA	-5	True	TATAAA	-19	NA	115296654	115267189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_76804.known	chr5	-	2145	9	FSM	ENSG00000164221.13	ENST00000506442.5	2145	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	49.4968433336915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTATTTGTTTGAA	NA	False	NA	-54	True	NA	NA	NA	115296693	115267374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115267919_115268881_115269001_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_76806.known	chr5	-	5697	3	FSM	ENSG00000145780.8	ENST00000274457.5	5697	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	6.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTATTCTTATTAA	-13	True	NA	-9	True	AATAAA	-18	NA	115544775	115520907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115525618_115542949_115543684_115544522
transcript_76811.known	chr5	-	1565	5	FSM	ENSG00000129596.5	ENST00000250535.5	1565	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	24.4987244565916	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-1	True	NA	-2	True	AATAAA	-17	NA	115816659	115804732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
transcript_76814.known	chr5	+	1180	7	FSM	ENSG00000177879.17	ENST00000395548.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	513.836117410557	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCAATAATTTTTTTTA	50	True	NA	49	True	NA	NA	NA	115841996	115914011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_115842107_115852978_115853015_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_76815.known	chr5	+	1276	6	FSM	ENSG00000177879.17	ENST00000316788.12	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_4	119.296940446937	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	-12	True	NA	4	True	AATAAA	-22	NA	115841934	115914081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_115842107_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_7682.known	chr1	-	895	6	FSM	ENSG00000163479.14	ENST00000480567.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	730.650778416064	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCCTTGGTTCCA	77	False	NA	NA	False	NA	NA	NA	156020889	156009359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020726
transcript_76821.known	chr5	-	1082	5	FSM	ENSG00000145782.13	ENST00000379594.7	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	353.499911598292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTCCAAGGTTGA	-7	True	NA	25	True	NA	NA	NA	115841837	115831545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115841389
transcript_76824.known	chr5	-	773	5	FSM	ENSG00000145782.13	ENST00000505993.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	350.012410494257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCCATTGCTCCTACT	1	True	NA	-13	True	CATAAA	-15	NA	115841565	115831583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840817_115840935_115841389
transcript_76838.known	chr5	-	1430	3	FSM	ENSG00000145782.13	ENST00000500945.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGCTGCAGAGGCAA	1	True	NA	NA	False	AATAAA	-14	NA	115841565	115830672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_115831864_115832601_115832665_115841389
transcript_76843.known	chr5	+	1433	7	FSM	ENSG00000145781.9	ENST00000632434.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	43.9497819486438	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGAAGTGTACATTT	2	True	NA	30	True	AATAAA	-17	NA	116085025	116293286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_116085094_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_76847.nnic	chr5	+	1692	7	NNC	ENSG00000145781.9	novel	793	4	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	266.233867534208	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGAAGTGTACATTTT	93	False	NA	31	True	AATAAA	-18	NA	116085116	116293287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_116085443_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_76848.known	chr5	+	869	7	FSM	ENSG00000145781.9	ENST00000515539.5	869	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	272.501987760334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAGGTTCTAATATAC	450	False	NA	NA	False	AATAGA	-15	NA	116085473	116292657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_116085607_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_76852.known	chr5	-	1610	1	FSM	ENSG00000271918.1	ENST00000606662.1	1610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCAGTGGGAGTTGGAT	-17	True	NA	NA	False	ATTAAA	-39	NA	116085416	116083806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_116083800_116085400
transcript_76855.known	chr5	+	1835	13	FSM	ENSG00000172869.15	ENST00000503802.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	21.8263347561813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	49	True	NA	10	True	AATAAA	-19	NA	119071204	119133691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_76856.known	chr5	+	11538	44	FSM	ENSG00000172869.15	ENST00000539542.6	11538	44	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_34	26.2088173950723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGGGTATACTATTGT	12	True	NA	18	True	AATAAA	-19	NA	119071086	119249127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119206833_119206897_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
transcript_76859.nic	chr5	+	1412	11	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-120	4359	-2	0	5prime_fragment	FALSE	canonical	3	34	junction_1	23.1292023208757	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACAGCAACTTAGAAA	10	True	NA	31	True	AATAAA	-31	NA	119071084	119129332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210
transcript_76868.known	chr5	+	795	2	FSM	ENSG00000145779.8	ENST00000274456.6	795	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGACTGATCATGATT	-3	True	NA	NA	False	NA	NA	NA	119268691	119393394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119268908_119392815
transcript_76871.known	chr5	+	6976	2	FSM	ENSG00000145779.8	ENST00000504771.3	6976	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATTCATGCTGGTT	-1	True	NA	10	True	ATTAAA	-20	NA	119356018	119399688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119356122_119392815
transcript_76873.known	chr5	+	2589	25	FSM	ENSG00000133835.18	ENST00000645832.1	2589	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	358.202512457067	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGATAGCATTGATA	14	True	NA	26	True	AATAAA	-29	NA	119452537	119542269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76875.known	chr5	+	2881	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	402.719470875475	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-27	True	NA	23	True	AATAAA	-17	NA	119452496	119542332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76878.known	chr5	+	2628	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_10	86.899176743595	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-27	True	NA	23	True	AATAAA	-17	NA	119452496	119542332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76880.known	chr5	+	2551	24	FSM	ENSG00000133835.18	ENST00000643250.1	2551	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	338.115443199592	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-3	True	NA	23	True	AATAAA	-17	NA	119452752	119542332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477493_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76882.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000684214.1	2494	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_21	280.557462330663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGATACCTTTGTTT	3	True	NA	7	True	AATAAA	-1	NA	119452475	119542316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119536422_119536551_119541904
transcript_76883.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000515320.5	2494	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	281.797216962133	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGTTTCCTTAGAAT	-27	True	NA	9	True	AATAAA	-12	NA	119452496	119542252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76889.known	chr5	+	196	3	FSM	ENSG00000133835.18	ENST00000519184.5	196	3	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_2	64	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGGAGAGGTGGAAAAG	41	False	NA	NA	False	AAGAAA	-2	NA	119452564	119473980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119452634_119456314_119456369_119473907
transcript_76890.known	chr5	+	844	5	FSM	ENSG00000133835.18	ENST00000509606.1	844	5	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_1	89.1487520944629	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	NA	False	NA	23	True	AATAAA	-17	NA	119527157	119542332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_76893.known	chr5	+	2855	8	FSM	ENSG00000151304.6	ENST00000339397.5	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	9.40256152680248	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAATTCAAGGGATTA	-29	True	NA	NA	False	GATAAA	-6	NA	121961974	122028633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941
transcript_76898.nic	chr5	+	780	6	ISM	ENSG00000151304.6	ENST00000339397.5	2855	8	-15	8191	-15	-8191	5prime_fragment	FALSE	canonical	3	88	junction_2	10.6320270880016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGATCTGATAGCTCAC	-44	True	NA	-41	True	NA	NA	NA	121961959	122020442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087
transcript_76908.known	chr5	+	6479	15	FSM	ENSG00000205302.7	ENST00000379516.7	6479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	261.96799344927	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTGCCTTCTTACTGC	15	True	NA	NA	False	AATAAA	-28	NA	122775079	122834543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122775212_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_7691.known	chr1	-	3582	11	FSM	ENSG00000160803.8	ENST00000368309.4	3582	11	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	28.4281550579703	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	3	True	NA	NA	False	AATAAA	-23	NA	156053798	156035298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051858_156053593
transcript_76910.known	chr5	+	2119	15	FSM	ENSG00000205302.7	ENST00000514949.1	2119	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	337.606158663237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATGTGGTTTTATAT	138	False	NA	NA	False	AATAAA	-18	NA	122775202	122829755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122775763_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_76923.nnic	chr5	+	2128	8	NNC	ENSG00000064652.11	novel	1987	7	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	50.4150123414421	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	77	False	NA	14	True	AATAAA	-16	NA	122845569	123009205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_122845694_122866194_122866293_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_76928.nnic	chr5	+	2265	8	NNC	ENSG00000064652.11	novel	1050	8	NA	NA	-24	3502	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	44.66702203128	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAGAGAATAAGGCTGTA	88	False	NA	NA	False	AATAAA	-29	NA	122845580	123012707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681_123007746_123011001
transcript_76929.known	chr5	+	608	8	FSM	ENSG00000064652.11	ENST00000511545.5	608	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.941072296592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAAGTCACAGTCAAGG	59	False	NA	NA	False	NA	NA	NA	122845662	123007782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122845694_122853673_122853768_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_7693.known	chr1	+	621	4	FSM	ENSG00000116586.12	ENST00000368305.9	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_3	79.8262000988536	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	-32	True	NA	37	True	AATAAA	-16	NA	156054781	156058506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156054958_156055262_156055426_156057977_156058068_156058314
transcript_76931.known	chr5	+	1987	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	20.5406101824329	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	9	True	NA	14	True	AATAAA	-16	NA	122845612	123009205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_76934.known	chr5	+	588	6	FSM	ENSG00000064652.11	ENST00000506996.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	17.2464489098481	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGACACTTAGAATTTT	22	False	NA	5	True	AATAAA	-16	NA	122845625	123002142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
transcript_76936.known	chr5	-	1364	5	FSM	ENSG00000168938.6	ENST00000306442.5	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_4	18.2277261335582	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGCCCATCCACATC	-23	True	NA	NA	False	TATAAA	-31	NA	123036725	123023249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_123024004_123025783_123025969_123028774_123028869_123029304_123029419_123036508
transcript_76939.known	chr5	-	4667	21	FSM	ENSG00000168944.17	ENST00000328236.10	4667	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	39.9417075248417	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTCTGAGTTCTTGAGC	278	False	NA	-17	True	AATAAA	-14	NA	123423558	123344894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949_123423031_123423508
transcript_76945.known	chr5	-	2513	7	FSM	ENSG00000253807.6	ENST00000662643.1	2513	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.85287379477062	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAGGCTTGTCAAATAT	NA	False	NA	NA	False	NA	NA	NA	124314679	124131240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_124133140_124134423_124134501_124135039_124135125_124137211_124137321_124306175_124306292_124314316_124314379_124314514
transcript_76946.nnic	chr5	+	388	2	FSM	ENSG00000289458.1	ENST00000685834.1	356	2	-37	5	-37	-5	multi-exon	FALSE	canonical	3	727	junction_1	0	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCCATGTAATTTTG	NA	False	NA	18	True	AATAAA	-30	NA	124497283	124505105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_124497592_124505025
transcript_76949.known	chr5	-	2605	5	FSM	ENSG00000168916.16	ENST00000509799.5	2605	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	14.2016724367238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCAAAAAAGCTACCAACT	8	True	NA	NA	False	GATAAA	-6	NA	124748807	124648236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124748532
transcript_76952.nnic	chr5	-	1841	4	NIC	ENSG00000168916.16	novel	2605	5	NA	NA	-31	294	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	26.2466929133727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGCGAAAGCTAAAGG	-2	True	NA	-48	True	AAAAAG	-6	NA	124748838	124647942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_124649134_124649609_124649698_124701013_124701270_124748532
transcript_76956.known	chr5	+	2905	14	FSM	ENSG00000155324.10	ENST00000285689.8	2905	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.5841234232719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGACAATG	3	True	NA	NA	False	AAGAAA	-26	NA	126423408	126494364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_126423690_126465425_126465546_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_7696.known	chr1	+	521	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	791.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	-22	True	NA	37	True	AATAAA	-16	NA	156054791	156058506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156054958_156055262_156055426_156058314
transcript_76964.known	chr5	-	2501	19	FSM	ENSG00000164904.18	ENST00000636879.1	2501	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	245.405560020324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTTTACCAAAAAATAC	-13	True	NA	NA	False	NA	NA	NA	126595219	126544149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582104_126582150_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76968.known	chr5	-	2554	18	FSM	ENSG00000164904.18	ENST00000637272.1	2554	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	190.492931872617	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGCAGTGAGCCTAGA	-13	True	NA	NA	False	NA	NA	NA	126595219	126544042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559326_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76969.known	chr5	-	2639	18	FSM	ENSG00000164904.18	ENST00000636808.1	2639	18	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_17	186.541756691684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCGTCTTTACCAAAAAA	5970	False	NA	NA	False	NA	NA	NA	126595362	126544152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126595006
transcript_76979.known	chr5	-	2332	16	FSM	ENSG00000164904.18	ENST00000636743.1	2332	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	201.802169352947	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCGTCTTTACCAAAAA	-13	True	NA	NA	False	NA	NA	NA	126595219	126544153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126595006
transcript_7698.known	chr1	+	462	3	FSM	ENSG00000116586.12	ENST00000463371.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	781.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	682	False	NA	37	True	AATAAA	-16	NA	156055495	156058506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156055676_156057977_156058068_156058314
transcript_76980.known	chr5	-	2466	16	FSM	ENSG00000164904.18	ENST00000637206.1	2466	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	201.983827735457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACAGTGAGATCCTG	6063	False	NA	NA	False	NA	NA	NA	126595269	126544009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76981.known	chr5	-	1935	16	FSM	ENSG00000164904.18	ENST00000553117.5	1935	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	201.935127096688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCCTGACCAAGTG	5996	False	NA	NA	False	AATACA	-39	NA	126595336	126544595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76984.known	chr5	-	1126	10	FSM	ENSG00000164904.18	ENST00000413020.6	1126	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	224.857046494044	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTACATGGTGAAACTC	-12	True	NA	NA	False	NA	NA	NA	126595218	126564357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126564593_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_76994.known	chr5	-	2037	19	FSM	ENSG00000164904.18	ENST00000458249.6	2037	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	247.140985404418	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTTACAACATAGCCA	6100	False	NA	69	True	ATTAAA	-32	NA	126595232	126544784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126594107_126594268_126595006
transcript_76995.known	chr5	-	1773	18	FSM	ENSG00000164904.18	ENST00000637782.1	1773	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	188.985563608957	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGCTTCTTTTTATATG	-13	True	NA	NA	False	AATAAA	-19	NA	126595219	126531199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126531387_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_7700.known	chr1	+	623	3	FSM	ENSG00000116586.12	ENST00000487106.5	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_2	97.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	271	False	NA	37	True	AATAAA	-16	NA	156055084	156058506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156055426_156057977_156058068_156058314
transcript_77000.known	chr5	+	3609	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_4	64.7649596618418	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	3	True	NA	50	True	AATAAA	-24	NA	126600946	126627252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
transcript_77008.known	chr5	-	3946	5	FSM	ENSG00000173926.6	ENST00000308660.6	3946	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	9.28372231381357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTGTCTTTCATTG	5	True	NA	NA	False	AATAAA	-20	NA	127030558	126867713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_126870792_126878184_126878395_126914929_126915135_126917983_126918228_127030349
transcript_77014.nic	chr5	-	1086	4	NIC	ENSG00000173926.6	novel	764	4	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	26.1321428300262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTACTCATTATTTC	-2	True	NA	NA	False	AAGAAA	-7	NA	127030592	126898872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_126899267_126914929_126915135_126917983_126918228_127030349
transcript_77015.nic	chr5	-	1636	3	ISM	ENSG00000173926.6	ENST00000308660.6	3946	5	-34	46272	-34	675	5prime_fragment	FALSE	canonical	3	53	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTGGATATTG	-2	True	NA	NA	False	NA	NA	NA	127030592	126913985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_126915135_126917983_126918228_127030349
transcript_77017.known	chr5	+	2238	15	FSM	ENSG00000145794.17	ENST00000418761.6	2238	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.1347189771118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGATTTCTAGTGTC	18	True	NA	14	True	AGTAAA	-17	NA	127290846	127424604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127424338
transcript_77018.known	chr5	+	2365	14	FSM	ENSG00000145794.17	ENST00000508365.5	2365	14	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_13	32.9548732153388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATGTTTCAGCTTGGCT	17	True	NA	NA	False	NA	NA	NA	127290845	127424781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127424338
transcript_77019.nic	chr5	+	1737	5	ISM	ENSG00000145794.17	ENST00000418761.6	2238	15	-51	82886	0	-75951	5prime_fragment	FALSE	canonical	0	0	junction_2	53.2276948589736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAATAAAAATACGTT	0	True	NA	NA	False	AATACA	-43	NA	127290795	127341718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529
transcript_77024.known	chr5	+	4664	9	FSM	ENSG00000164244.21	ENST00000296666.13	4664	9	0	0	0	0	multi-exon	TRUE	canonical	3	403	junction_8	35.0348041238994	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGTATAGCGATTTT	-14	True	NA	33	True	AATAAA	-20	NA	127517639	127555085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_7703.known	chr1	+	1100	5	FSM	ENSG00000132698.15	ENST00000361084.10	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	34.4564943080401	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	-10	True	NA	25	True	AATAAA	-16	NA	156061159	156070504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156061444_156065910_156066107_156068269_156068464_156069670_156069752_156070159
transcript_77032.nic	chr5	+	4811	9	NIC	ENSG00000164244.21	novel	4664	9	NA	NA	60	0	intron_retention	FALSE	canonical	3	88	junction_1	116.937750534205	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGTATAGCGATTTT	16	False	NA	33	True	AATAAA	-20	NA	127517715	127555085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_127518000_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_77033.known	chr5	+	5504	8	FSM	ENSG00000164244.21	ENST00000442138.6	5504	8	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_5	33.1268434219447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAAATCTATTTACAGC	-3	True	NA	NA	False	AAAAAG	-5	NA	127517650	127552151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818
transcript_77035.known	chr5	-	2654	4	FSM	ENSG00000245937.9	ENST00000499346.7	2654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.0855260988773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	-9	True	NA	NA	False	NA	NA	NA	128083100	127939151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082734
transcript_77036.nic	chr5	-	1512	3	FSM	ENSG00000245937.9	ENST00000687795.1	1510	3	-7	5	0	0	multi-exon	FALSE	canonical	3	24	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAAGAGCGTGTGTG	-13	True	NA	NA	False	AATAAA	-15	NA	128083104	127965887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127966929_128061143_128061245_128082734
transcript_77037.nic	chr5	-	1277	3	FSM	ENSG00000245937.9	ENST00000689029.1	1292	3	10	5	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAAGAGCGTGTGTG	-13	True	NA	NA	False	AATAAA	-15	NA	128083104	127965887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127966929_128061143_128061245_128082969
transcript_77038.nic	chr5	-	941	3	FSM	ENSG00000245937.9	ENST00000687795.1	1510	3	-7	576	0	90	multi-exon	FALSE	canonical	3	24	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCCGTGTGTGACCCG	-13	True	NA	-3	True	AATAAA	-17	NA	128083104	127966458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_127966929_128061143_128061245_128082734
transcript_77040.known	chr5	-	3209	3	FSM	ENSG00000245937.9	ENST00000668567.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAGATTCTTGCAA	1450	False	NA	NA	False	AATACA	-16	NA	128083131	128021587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_128024299_128061143_128061245_128082734
transcript_77041.known	chr5	-	2997	3	FSM	ENSG00000245937.9	ENST00000501702.7	2997	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATAAACTTTAGAAT	-3	True	NA	NA	False	AATGAA	-25	NA	128083094	128021527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_128024299_128061143_128061245_128082969
transcript_77042.known	chr5	-	4027	3	FSM	ENSG00000245937.9	ENST00000654888.1	4027	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGGATTCTACTGAAGA	1409	False	NA	NA	False	CATAAA	-9	NA	128083172	128057156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_128060645_128061143_128061245_128082734
transcript_77044.nnic	chr5	+	2589	11	NNC	ENSG00000113396.13	novel	2616	11	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	12.1675798744039	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	-6	True	NA	15	True	AATAAA	-20	NA	128965476	129033635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_128965693_128965977_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_77045.known	chr5	+	2863	10	FSM	ENSG00000113396.13	ENST00000262462.9	2863	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	8.01387685344754	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	5	True	NA	15	True	AATAAA	-20	NA	128965487	129033635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_77048.known	chr5	+	1942	5	FSM	ENSG00000066583.12	ENST00000173527.6	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	22.2977016752848	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTGATTGAAATTAT	13	True	NA	7	True	ATTAAA	-15	NA	129094748	129114028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_129095076_129104955_129105076_129105184_129105389_129106945_129107063_129112854
transcript_77053.known	chr5	-	786	2	FSM	ENSG00000249421.2	ENST00000502827.1	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGTAGAGGTGCCTC	355	False	NA	NA	False	NA	NA	NA	129460689	129459558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_129460080_129460424
transcript_77054.known	chr5	+	6219	5	FSM	ENSG00000186687.16	ENST00000379380.9	6219	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	4.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	-28	True	NA	25	True	AATAAA	-25	NA	131170943	131205428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131187027_131187110_131199530
transcript_77056.known	chr5	-	1032	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	2259.67612447005	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	NA	False	NA	-8	True	AATAAA	-26	NA	131165349	131159284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
transcript_77057.known	chr5	+	317	4	FSM	ENSG00000186687.16	ENST00000507584.1	317	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	62.4731053245226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGCAAAAGTCCTGGAAA	17	True	NA	NA	False	AATACA	-38	NA	131170988	131199653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131199530
transcript_7706.known	chr1	+	681	4	FSM	ENSG00000132698.15	ENST00000473336.5	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	50.1752484354144	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	176	False	NA	25	True	AATAAA	-16	NA	156061382	156070504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156061444_156068269_156068464_156069670_156069752_156070159
transcript_77062.known	chr5	-	825	4	FSM	ENSG00000169567.13	ENST00000508495.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2470.64202182348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGAGTGTTGCGTT	-20	True	NA	-11	True	AATAAA	-23	NA	131165301	131159287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131160655_131160845_131162571_131162677_131165094
transcript_77063.known	chr5	-	1070	4	FSM	ENSG00000169567.13	ENST00000508488.2	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2460.86177317351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTCTCTGAGTGTTG	-44	True	NA	-15	True	AATAAA	-19	NA	131165325	131159291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131162063_131162478_131162571_131162677_131165094
transcript_77067.known	chr5	-	3080	3	FSM	ENSG00000169567.13	ENST00000675372.1	3080	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	2295	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGGTACAAATGATAGT	-52	False	NA	NA	False	AATAAA	-2	NA	131165333	131156910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131162571_131162677_131165059
transcript_77068.known	chr5	-	852	3	FSM	ENSG00000169567.13	ENST00000304043.10	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	4893	junction_1	180	2952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATAGGAAATTGACCA	25	True	NA	NA	False	NA	NA	NA	131165256	131159026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131159612_131162571_131162677_131165094
transcript_7707.known	chr1	+	868	3	FSM	ENSG00000132698.15	ENST00000487325.5	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	41.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCATGGGCTCTAAATC	-1	True	NA	NA	False	NA	NA	NA	156061205	156070106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156061444_156068269_156068464_156069670
transcript_77071.nnic	chr5	+	1560	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-3	-539	at_least_one_novel_splicesite	FALSE	canonical	3	270	junction_5	54.9821789309955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCATTCATTCTGTTGT	-4	True	NA	6	True	AATAAA	-18	NA	131264071	131392567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_77072.nnic	chr5	+	3660	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	270	junction_5	54.9821789309955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTGGCCTTTCCTTT	-4	True	NA	33	True	AATAAA	-14	NA	131264071	131394667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_77073.known	chr5	+	3591	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	127.313785585065	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTAGTTTTTCTTTT	-1	True	NA	56	True	AATAAA	-37	NA	131264074	131394690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_77075.nnic	chr5	+	1394	5	NNC	ENSG00000158985.14	novel	3485	5	NA	NA	1	-539	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	152.216950435883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCATTCATTCTGTTGT	-7	True	NA	6	True	AATAAA	-18	NA	131264068	131392567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_131264167_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_77076.nnic	chr5	+	3494	5	NNC	ENSG00000158985.14	novel	3485	5	NA	NA	1	-5	intron_retention	FALSE	canonical	3	42	junction_1	152.216950435883	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTGGCCTTTCCTTT	-7	True	NA	33	True	AATAAA	-14	NA	131264068	131394667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_131264167_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_77077.known	chr5	+	3485	5	FSM	ENSG00000158985.14	ENST00000395246.5	3485	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	177.49700701702	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTAGTTTTTCT	-7	True	NA	53	True	AATAAA	-34	NA	131264008	131394687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_131264167_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_7708.known	chr1	-	6591	2	FSM	ENSG00000254726.3	ENST00000532414.3	6591	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTCTTCGTTCTCTG	13	True	NA	-9	True	ATTAAA	-45	NA	156082465	156072012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156077683_156081544
transcript_77080.known	chr5	-	3107	18	FSM	ENSG00000158987.22	ENST00000510071.5	3107	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	8.11679449913428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTCCTTACTCTGGT	-18	True	NA	NA	False	AATAAA	-20	NA	131635231	131463614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
transcript_77084.nic	chr5	-	1235	6	ISM	ENSG00000158987.22	ENST00000510071.5	3107	18	-2	83895	-2	586	5prime_fragment	FALSE	canonical	3	32	junction_2	9.64157663455516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGCTGTGTCTTCAAAA	-20	True	NA	NA	False	NA	NA	NA	131635233	131547509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
transcript_77085.known	chr5	-	1720	13	FSM	ENSG00000217128.13	ENST00000511848.1	1720	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.8541390362025	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAAGCATCTCTGCTTT	19	False	131797035	NA	False	AATAAA	-23	NA	131797016	131677596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_77087.known	chr5	-	2230	16	FSM	ENSG00000072682.20	ENST00000166534.8	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	23.7627158941622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-15	True	NA	-8	True	AATAAA	-24	NA	132227857	132192609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_77088.known	chr5	-	2625	16	FSM	ENSG00000072682.20	ENST00000379100.7	2625	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	26.4042084187772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCCTTACTTGGAGTA	7	True	NA	-11	True	AATAAA	-21	NA	132227835	132192612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132226696_132227259_132227789
transcript_77089.nic	chr5	-	2221	16	NIC	ENSG00000072682.20	novel	2223	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_15	20.572473518434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-12	True	NA	-8	True	AATAAA	-24	NA	132227854	132192609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_77090.known	chr5	-	2223	16	FSM	ENSG00000072682.20	ENST00000379086.5	2223	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	22.7091758253501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	23	True	NA	-8	True	AATAAA	-24	NA	132227819	132192609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227259_132227789
transcript_77091.known	chr5	-	4553	15	FSM	ENSG00000072682.20	ENST00000379104.7	4553	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	20.1757583374156	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-11	True	NA	-2	True	ATTAAA	-16	NA	132227853	132190146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_77093.known	chr5	-	4547	15	FSM	ENSG00000072682.20	ENST00000360568.8	4547	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	15.1415093739841	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-11	True	NA	-2	True	ATTAAA	-16	NA	132227853	132190146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_77095.known	chr5	+	1006	6	FSM	ENSG00000131435.13	ENST00000379018.7	1006	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	76.8765243751303	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACCTGGCCTGCCAC	18	False	NA	31	True	AATAAA	-22	NA	132257706	132272332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132272024
transcript_77096.nnic	chr5	+	3445	20	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-18	30304	-18	18	5prime_fragment	FALSE	canonical	3	135	junction_4	16.7365110857699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGAGGAACTAAAAGAA	-6	True	NA	NA	False	AAGAAA	-34	NA	132556958	132616045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002
transcript_77097.nnic	chr5	+	3353	19	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-23	37007	16	1	5prime_fragment	FALSE	canonical	3	135	junction_4	16.9185594635296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGATAAATGAAGATAT	-11	True	NA	NA	False	AATAAA	-37	NA	132556953	132609342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282
transcript_7710.known	chr1	+	1514	10	FSM	ENSG00000160789.24	ENST00000675431.1	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	59.669046093669	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	-3	True	NA	16	True	ATTAAA	-19	NA	156126174	156137866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_77102.nnic	chr5	+	2223	12	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-26	51425	13	-844	5prime_fragment	FALSE	canonical	3	135	junction_4	17.237763656222	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAAGAGCAGTTGTCC	-14	True	NA	NA	False	AATAAA	-26	NA	132556950	132594924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868
transcript_77105.known	chr5	-	3554	10	FSM	ENSG00000125347.15	ENST00000245414.9	3554	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.51494009523069	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCAGTGGTTACCA	20	True	NA	NA	False	AATAAA	-18	NA	132490773	132481608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_77106.known	chr5	+	8272	25	FSM	ENSG00000113522.14	ENST00000378823.8	8272	25	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	18.8900326451103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTTTCTCCCAGAACT	12	True	NA	34	True	AATAAA	-26	NA	132556976	132646349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002_132616131_132618069_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177
transcript_77110.nic	chr5	+	2574	13	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-61	50581	-14	0	5prime_fragment	TRUE	canonical	3	135	junction_4	16.5100979201619	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGCGGCGTGATGAAA	-49	True	NA	22	True	GATAAA	-33	NA	132556915	132595768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572
transcript_77114.known	chr5	-	3266	18	FSM	ENSG00000131437.16	ENST00000378735.5	3266	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	16.0261464564072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTATTGGGTAATCC	-22	True	NA	NA	False	AATAAA	-16	NA	132737572	132695629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132706450_132706460_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_77116.known	chr5	-	6325	17	FSM	ENSG00000131437.16	ENST00000378746.8	6325	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	9.38894795757224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTAGTGGTCTGCTGC	NA	False	NA	-4	True	AATAAA	-18	NA	132737638	132692627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_7712.nnic	chr1	+	373	3	NNC	ENSG00000160789.24	novel	2811	13	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	114	False	NA	5	True	AATAAA	-18	NA	156082690	156093811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_156082724_156082947_156083185_156093708
transcript_77124.nic	chr5	-	1882	5	ISM	ENSG00000131437.16	ENST00000618515.4	3333	19	-7	23871	-7	6625	5prime_fragment	FALSE	canonical	3	39	junction_2	4.33012701892219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGGATTAGAGGTAAAA	-29	True	NA	NA	False	AAAAAG	-6	NA	132737579	132719502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_77126.known	chr5	+	1573	3	FSM	ENSG00000164405.11	ENST00000378670.8	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	4444	junction_1	670	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAATTATCTTTTTG	-5	True	NA	NA	False	AATAAA	-19	NA	132866641	132868847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132866688_132866868_132867036_132867487
transcript_77127.known	chr5	+	509	2	FSM	ENSG00000164405.11	ENST00000480372.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGTGATGATAGTTGCA	10	True	NA	NA	False	NA	NA	NA	132866656	132867342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132866692_132866868
transcript_77128.known	chr5	+	258	2	FSM	ENSG00000164405.11	ENST00000496429.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	-5	True	NA	25	True	AATAAA	-29	NA	132866641	132867699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132866688_132867487
transcript_77129.known	chr5	+	586	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	5784	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	-1	True	NA	9	True	AATAAA	-13	NA	132866645	132867683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_132867036_132867487
transcript_77136.known	chr5	-	3348	13	FSM	ENSG00000072364.13	ENST00000378595.7	3348	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	5.75905084772366	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	287	False	NA	8	True	TTTAAA	-5	NA	132963618	132891816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132892405_132893029_132893119_132896322_132897241_132898229_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132927120_132927208_132932177_132932223_132934146_132934942_132937066_132937194_132963258
transcript_77138.known	chr5	-	2189	5	FSM	ENSG00000155329.12	ENST00000509437.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	108.331378187485	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	6	True	NA	-4	True	AATAAA	-29	NA	133026549	132996984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_77139.known	chr5	-	794	5	FSM	ENSG00000155329.12	ENST00000513541.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	120.692532909041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTTTATTTGAAGGGT	6	True	NA	NA	False	NA	NA	NA	133026549	132998407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133022840_133022907_133026496
transcript_7714.known	chr1	+	394	3	FSM	ENSG00000160789.24	ENST00000495341.5	394	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAAGGTGAAACCTCGT	23	False	NA	NA	False	NA	NA	NA	156082599	156083613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156082664_156082947_156083185_156083520
transcript_77140.known	chr5	-	2160	5	FSM	ENSG00000155329.12	ENST00000355372.6	2160	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	134.165010341743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTTAAACTTCTGTTA	6	True	NA	-15	True	AATAAA	-18	NA	133026549	132996995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998833_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_77149.known	chr5	-	2178	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	40.4310112001501	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	NA	False	NA	-4	True	AATAAA	-29	NA	133026604	132996984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
transcript_77151.known	chr5	-	608	4	FSM	ENSG00000155329.12	ENST00000509008.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	133.389987963448	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATTTAGAATATGTTA	6	True	NA	NA	False	AAAACA	-18	NA	133026549	132998527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133026496
transcript_77158.known	chr5	-	876	3	FSM	ENSG00000155329.12	ENST00000513848.5	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTTCTAATGCTTTT	-16	True	NA	-121	True	NA	NA	NA	133026571	132998211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_132998851_133006758_133006921_133026496
transcript_7716.nnic	chr1	+	4201	5	NNC	ENSG00000160785.14	novel	3662	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	94.6612381072633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGCTTGCGCGTATT	-12	True	NA	13	True	ATTAAA	-20	NA	156194097	156212795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_156194248_156198992_156199722_156199834_156200473_156207885_156208014_156210239
transcript_77162.known	chr5	-	325	3	FSM	ENSG00000155329.12	ENST00000504170.2	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	39.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGTGGATATTTT	NA	False	NA	-5	True	AATAAA	-13	NA	133026589	133019037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133019204_133022840_133022907_133026496
transcript_77164.known	chr5	-	829	1	FSM	ENSG00000286408.1	ENST00000665702.1	829	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGATTTGTCGTTT	NA	False	NA	2	True	NA	NA	NA	133051893	133051064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133051100_133051900
transcript_77165.nic	chr5	+	2552	20	NNC	ENSG00000170606.16	novel	4774	19	NA	NA	-115	-569	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	470.273251150778	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAGCACAAATGAAG	1181	False	NA	7	True	NA	NA	NA	133051897	133103908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096205_133096205_133096251_133097160_133097287_133099544_133099653_133101758_133101810_133101810_133101879_133103864
transcript_77169.known	chr5	+	4774	19	FSM	ENSG00000170606.16	ENST00000304858.7	4774	19	0	0	0	0	multi-exon	FALSE	canonical	3	1255	junction_6	135.979119675244	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCCTTAATTCCATAA	-27	True	NA	31	True	AATAAA	-23	NA	133052012	133106449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
transcript_77176.known	chr5	+	2358	21	NNC	ENSG00000170606.16	novel	4774	19	NA	NA	115	-528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	541.430630367363	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAATCTGCAGAACAAG	88	False	NA	48	True	AAAAAG	-33	NA	133052127	133103949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096146_133096150_133096205_133096205_133096251_133097160_133097287_133099544_133099653_133101758_133101810_133101810_133101879_133103864
transcript_7718.nnic	chr1	+	1332	4	NNC	ENSG00000160785.14	novel	3467	4	NA	NA	-24	-1912	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	92.6534762794503	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGCTTCTCACTCTGTC	NA	False	NA	NA	False	AATAAA	-37	NA	156194078	156208515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_156194248_156199834_156200473_156207885_156208014_156208118
transcript_77180.known	chr5	-	2188	3	FSM	ENSG00000113583.8	ENST00000231512.5	2188	3	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	47	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-17	True	NA	-10	True	AATAAA	-20	NA	133968625	133955509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133956991_133959493_133960021_133968445
transcript_77181.nic	chr5	-	2116	3	NIC	ENSG00000113583.8	novel	2188	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	265	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-25	True	NA	-10	True	AATAAA	-20	NA	133968633	133955509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_133956991_133959493_133960021_133968525
transcript_77182.known	chr5	-	1807	9	FSM	ENSG00000213585.11	ENST00000395044.7	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_8	452.177353894465	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTCTGTTGTCTTTA	-27	True	NA	-6	True	AATAAA	-15	NA	134004742	133971914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993016_134004646
transcript_77183.known	chr5	-	1873	9	FSM	ENSG00000213585.11	ENST00000395047.6	1873	9	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_8	220.653574636805	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTTAAAAAACTTGAAT	506	False	NA	-43	True	NA	NA	NA	134004842	133971951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004646
transcript_77189.known	chr5	-	831	6	FSM	ENSG00000213585.11	ENST00000466080.1	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	794.724958712132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTGGGTT	23	True	NA	NA	False	TATAAA	-21	NA	134004692	133988787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_133989244_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004646
transcript_7719.known	chr1	+	3467	4	FSM	ENSG00000160785.14	ENST00000359511.5	3467	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	4.08248290463863	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTTGCGCGTATTT	-6	True	NA	14	True	ATTAAA	-21	NA	156194103	156212796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156194248_156199834_156200473_156207885_156208014_156210239
transcript_77192.known	chr5	-	802	7	FSM	ENSG00000113558.19	ENST00000522855.5	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	3387.80796468093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAAACCTTACGGCCA	2	True	NA	-54	True	NA	NA	NA	134176950	134157571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176854
transcript_77200.known	chr5	-	1683	5	FSM	ENSG00000113558.19	ENST00000522552.5	1683	5	0	0	0	0	multi-exon	FALSE	canonical	3	6980	junction_3	312.846907448356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTTTATTCATGAGT	8	True	NA	21	True	AATAAA	-41	NA	134176964	134157337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_77206.known	chr5	-	586	3	FSM	ENSG00000006837.12	ENST00000521755.1	586	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	8	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	33	False	NA	-3	True	ATTAAA	-17	NA	134371004	134308000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134308467_134321790_134321904_134370997
transcript_77208.known	chr5	+	2241	6	FSM	ENSG00000119048.8	ENST00000265339.7	2241	6	0	0	0	0	multi-exon	TRUE	canonical	3	211	junction_2	13.4610549363711	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACTATAGACATTCA	-2	True	NA	NA	False	AAAAAG	-39	NA	134371568	134392108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388324_134388414_134390224
transcript_77211.known	chr5	+	235	2	FSM	ENSG00000119048.8	ENST00000504431.1	235	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGATAAATTAGAAAAAAA	35	False	NA	NA	False	ACTAAA	-5	NA	134371605	134374583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134371640_134374382
transcript_77213.known	chr5	+	644	6	FSM	ENSG00000119048.8	ENST00000507277.1	644	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	90.2055430669313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTGTATTTTTTTCC	33	False	NA	5	True	CATAAA	-12	NA	134371603	134390573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388351_134388414_134390224
transcript_77214.nnic	chr5	-	763	4	NNC	ENSG00000237190.4	novel	1228	3	NA	NA	-38	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.553293826224	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTTGTTGTTGATGT	NA	False	NA	-80	True	AATAAA	-16	NA	134411919	134402086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_134402130_134402610_134402927_134409902_134410003_134411615
transcript_77215.known	chr5	-	1228	3	FSM	ENSG00000237190.4	ENST00000458198.3	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	18.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGGTAATTAATTT	-4	True	NA	-58	True	AATAAA	-38	NA	134411881	134402064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134402927_134409902_134410003_134411615
transcript_77217.known	chr5	-	800	2	FSM	ENSG00000237190.4	ENST00000395009.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATCTGAGAATATCT	-4	True	NA	-6	True	AATAAA	-17	NA	134411881	134410548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134411083_134411615
transcript_77218.nic	chr5	+	2771	12	NIC	ENSG00000043143.22	novel	2802	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.0614718510783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTCTTTCCTCTG	-10	True	NA	41	True	AATATA	-19	NA	134524320	134579474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_134524430_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_77219.known	chr5	+	1835	7	FSM	ENSG00000043143.22	ENST00000681792.1	1835	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	36.4371605187159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGCCTGGGTAACAGA	3	True	NA	NA	False	NA	NA	NA	134526218	134563282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199
transcript_7722.known	chr1	+	1007	7	FSM	ENSG00000260238.6	ENST00000490491.5	1007	7	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_6	600.64088457432	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCAGTTTATGGAGT	NA	False	NA	30	True	AATAAA	-30	NA	156212981	156243332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_77220.known	chr5	+	2748	12	FSM	ENSG00000043143.22	ENST00000282605.8	2748	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.1665894574795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTCTTTCCTCTG	-16	True	NA	41	True	AATATA	-19	NA	134525656	134579474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134525743_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_77221.known	chr5	+	6389	23	FSM	ENSG00000113615.13	ENST00000398844.7	6389	23	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_18	21.4001621991227	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTGACTAGTTATTT	-13	True	NA	17	True	AATAAA	-20	NA	134648784	134727909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693726_134693934_134697125_134697247_134697898_134698058_134703758_134703933_134705326_134705438_134708712_134708889_134715023_134715162_134718068_134718174_134720997_134721091_134723566_134723671_134724979
transcript_77222.known	chr5	+	2700	13	FSM	ENSG00000113615.13	ENST00000322887.8	2700	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	34.7302101922807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTTTCTTGCTTTGT	26	False	NA	5	True	AATAAA	-16	NA	134648823	134693698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693030
transcript_77223.known	chr5	-	929	8	FSM	ENSG00000152700.14	ENST00000439578.5	929	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	90.5520483997339	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTGAAAACTGATTC	31	True	NA	-15	True	ATTAAA	-16	NA	134632774	134606801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632076_134632196_134632727
transcript_77224.known	chr5	-	6517	7	FSM	ENSG00000152700.14	ENST00000402673.7	6517	7	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	15.140086598901	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTGTCAAGTTCCATT	14	False	134632842	-3	True	AATAAA	-23	NA	134632828	134601148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
transcript_77227.known	chr5	-	506	5	FSM	ENSG00000152700.14	ENST00000509730.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	80.3336791140553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCTTCCGCTGGATGG	NA	False	NA	NA	False	NA	NA	NA	134613137	134606986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134613013
transcript_77231.known	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	16.2138486760204	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	-4	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
transcript_77233.nnic	chr5	+	971	3	NIC	ENSG00000164615.6	novel	2171	4	NA	NA	3	-336	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	104.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTCTATATTGCAGTG	-2	True	NA	NA	False	NA	NA	NA	134738517	134750993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_134738793_134741062_134741524_134750758
transcript_77234.nnic	chr5	+	1378	3	NIC	ENSG00000164615.6	novel	2027	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	104.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	86	False	NA	15	True	AATAAA	-16	NA	134738494	134751377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_134738793_134741062_134741524_134750758
transcript_77237.known	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	80	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	31	False	NA	15	True	AATAAA	-16	NA	134738582	134751377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134743986_134744053_134750758
transcript_77239.known	chr5	+	3614	2	FSM	ENSG00000164615.6	ENST00000678434.1	3614	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATTCCAGCTACTC	-7	True	NA	NA	False	AATACA	-27	NA	134738512	134744396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134741062
transcript_77240.known	chr5	+	1470	2	FSM	ENSG00000164615.6	ENST00000676829.1	1470	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTACAGGCGTGAGCCAC	-5	True	NA	NA	False	NA	NA	NA	134738514	134751950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134738793_134750758
transcript_77246.known	chr5	+	3821	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	0	0	0	multi-exon	FALSE	canonical	2	256	junction_19	106.646603011462	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATTTTTTTGCATTTC	18	False	NA	13	True	AGTAAA	-13	NA	134758803	134829296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_7725.known	chr1	+	773	6	FSM	ENSG00000260238.6	ENST00000320139.5	773	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	597.404586524074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGTGAGTCTGTCCA	8	True	NA	19	True	AATAAA	-19	NA	156213008	156243321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156242552_156242592_156242761_156242832_156243032
transcript_77250.known	chr5	+	5674	23	FSM	ENSG00000145833.16	ENST00000452510.7	5674	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	150.081004298478	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTTTCTTAAAATTA	-7	True	NA	9	True	AATAAA	-17	NA	134758778	134831121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816607_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_7726.known	chr1	+	837	6	FSM	ENSG00000160783.19	ENST00000497069.2	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	599.783494271058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGAATTTGCTGGAGG	25	False	NA	NA	False	NA	NA	NA	156213025	156239718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156225556_156225669_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_77264.nic	chr5	+	912	6	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-69	51628	-36	-226	5prime_fragment	FALSE	canonical	3	567	junction_4	56.2835677618255	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAGTAAAAAAATTTAA	NA	False	NA	71	True	NA	NA	NA	134758734	134777668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573
transcript_77265.nic	chr5	+	696	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-69	55556	-36	-4154	5prime_fragment	FALSE	canonical	3	567	junction_4	60.8620366073959	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGTAGAAAAATGGCG	NA	False	NA	20	True	AAGAAA	-15	NA	134758734	134773740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_77266.nic	chr5	+	764	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-69	55488	-36	-4086	5prime_fragment	FALSE	canonical	3	567	junction_4	60.8620366073959	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATCGAAGAGATGAAAC	NA	False	NA	-4	True	AAAAAG	-30	NA	134758734	134773808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_77267.nic	chr5	+	597	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-69	58351	-36	-6949	5prime_fragment	FALSE	canonical	3	595	junction_1	56.9580742495936	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAAAAAGACAAAGA	NA	False	NA	-23	True	NA	NA	NA	134758734	134770945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_77269.known	chr5	+	2923	3	FSM	ENSG00000181904.9	ENST00000504727.1	2923	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	33	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATGTTTACTATGTT	16	False	NA	26	True	AATAAA	-16	NA	134846095	134859732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134846213_134854897_134855328_134857356
transcript_77271.nic	chr5	+	2072	6	NIC	ENSG00000113621.15	novel	3090	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	52.1589877202386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGAGTCCACCTCTT	-29	True	NA	15	True	TATAAA	-18	NA	134874353	134901511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488_134900155_134901065
transcript_77277.known	chr5	+	3090	5	FSM	ENSG00000113621.15	ENST00000358387.9	3090	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	15.0166574176812	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCCTGTAATCCCAG	-12	True	NA	5	True	AATAAA	-17	NA	134874370	134901635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_77287.known	chr5	+	2365	4	FSM	ENSG00000132570.15	ENST00000254908.11	2365	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	4.92160768674447	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTATCTTGGTGTGT	-1	True	NA	24	True	ATTAAA	-17	NA	134905130	134962644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585
transcript_77291.known	chr5	+	457	1	FSM	ENSG00000279799.1	ENST00000623591.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGACTTTTCTTTCCTTT	51	False	NA	8	True	AATAAA	-19	NA	134905234	134905691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_134905200_134905700
transcript_77293.known	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	404.788660136373	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	780	False	NA	-1	True	NA	NA	NA	135399211	135334409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_77296.known	chr5	-	2789	9	FSM	ENSG00000113648.17	ENST00000511689.6	1917	9	-391	-481	262	481	multi-exon	FALSE	canonical	3	436	junction_5	200.878033580081	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGCGTGGAGCTTTC	369	False	NA	NA	False	NA	NA	NA	135399622	135333899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_77297.known	chr5	-	1881	9	FSM	ENSG00000113648.17	ENST00000304332.8	1881	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	310.593761004628	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGACTGGTGTGTTC	-1	True	NA	-9	True	AGTAAA	-12	NA	135399887	135334382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399748
transcript_77299.nic	chr5	-	1830	9	NIC	ENSG00000113648.17	novel	1881	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	312.040862708716	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGACTGGTGTGTTCCA	-4	True	NA	-7	True	AGTAAA	-14	NA	135399890	135334380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399804
transcript_7730.known	chr1	+	1068	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_4	79.9874990232849	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	6	True	NA	33	True	AATAAA	-21	NA	156213006	156240042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_77303.nic	chr5	-	1833	9	NIC	ENSG00000113648.17	novel	1917	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	323.657395056872	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGACTGGTGTGTTCCA	-4	True	NA	-7	True	AGTAAA	-14	NA	135399890	135334380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399804
transcript_77304.known	chr5	-	1772	8	FSM	ENSG00000113648.17	ENST00000360597.8	1772	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	358.508759463761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGAGTTGATTTAGT	7	True	NA	-8	True	NA	NA	NA	135399222	135334416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_77310.known	chr5	-	924	5	FSM	ENSG00000113648.17	ENST00000423969.6	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	381.546196416633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAATAAGGCTTTGGTT	0	True	NA	NA	False	NA	NA	NA	135399229	135334855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135388921_135389127_135399061
transcript_77311.known	chr5	-	861	6	FSM	ENSG00000113648.17	ENST00000507868.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	403.821940959131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGTGCTGCCGAGTGT	787	False	NA	NA	False	NA	NA	NA	135399204	135350813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135350914_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_77312.known	chr5	-	966	6	FSM	ENSG00000113648.17	ENST00000508785.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	415.270321597872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATATTTTTTGTTCC	814	False	NA	NA	False	NA	NA	NA	135399177	135359396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_135359629_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_77313.known	chr5	+	1464	8	FSM	ENSG00000145832.15	ENST00000433282.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	6.71276578541185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACATTGTTTCTCTGT	40	False	NA	3	True	AATAAA	-14	NA	135834713	135883448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135883061
transcript_77314.nnic	chr5	+	1397	7	NIC	ENSG00000145832.15	novel	1464	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	8.51306185941476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATTGTTTCTCTGTCA	-21	True	NA	5	True	AATAAA	-16	NA	135834652	135883450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135883061
transcript_77318.nnic	chr5	+	1005	5	NIC	ENSG00000145832.15	novel	1464	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	8.5146931829632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATTGTTTCTCTGTCA	-21	True	NA	5	True	AATAAA	-16	NA	135834652	135883450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135883061
transcript_77319.known	chr5	+	1148	5	FSM	ENSG00000145832.15	ENST00000412661.3	1148	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	6.89202437604511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGAGATTTTTTTCA	53	False	NA	NA	False	AATAAA	-26	NA	135834726	135888637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135888031
transcript_77320.known	chr5	+	1734	8	FSM	ENSG00000145832.15	ENST00000681962.1	1734	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	7.85064666516234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGAGATTTTTTTCA	-11	True	NA	NA	False	AATAAA	-26	NA	135834662	135888637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135888031
transcript_77321.known	chr5	+	2712	17	FSM	ENSG00000120708.17	ENST00000442011.7	2712	17	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	3.7243917288599	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTGTGTGCATGGTACA	-2	True	NA	NA	False	AATAAA	-15	NA	136028987	136063818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136029190_136033762_136033862_136044057_136044123_136046334_136046496_136046850_136047016_136047273_136047421_136049438_136049581_136052906_136053120_136053942_136054081_136054715_136054862_136055679_136055817_136056664_136056796_136059089_136059215_136060833_136060937_136061499_136061580_136062662_136062688_136063185
transcript_77323.known	chr5	+	7013	8	FSM	ENSG00000113658.18	ENST00000545279.6	7013	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	50.7555164389014	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	-35	True	NA	19	True	AATAAA	-13	NA	136132844	136182733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_77326.known	chr5	+	6937	7	FSM	ENSG00000113658.18	ENST00000545620.5	6937	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	43.4117879536576	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTGTCTTTTTTTGTT	-33	True	NA	20	True	AATAAA	-14	NA	136132846	136182734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_7733.known	chr1	+	1019	5	FSM	ENSG00000160783.19	ENST00000368279.7	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	524.46615715411	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGAGCATGCTTCCT	-8	True	NA	31	True	AATAAA	-19	NA	156212992	156240040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156239547
transcript_77334.nic	chr5	+	1063	4	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	-9	21589	-9	6981	5prime_fragment	FALSE	canonical	3	137	junction_2	64.4101441285972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAAGAATCACAGTTGT	-44	True	NA	NA	False	NA	NA	NA	136132835	136161144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855
transcript_7734.known	chr1	+	884	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	602.015988159783	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	5	True	NA	NA	False	NA	NA	NA	156213005	156239851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
transcript_77340.known	chr5	-	6805	15	FSM	ENSG00000146021.15	ENST00000309755.9	6805	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	10.0033157768118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCAGTATTTCATTT	-6	True	NA	-11	True	AATAAA	-17	NA	137736089	137617499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137637293_137637396_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_77341.nnic	chr5	-	1436	7	NNC	ENSG00000146021.15	novel	423	4	NA	NA	-1	328	intron_retention	FALSE	canonical	2	8	junction_1	12.9828947294336	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCATGACTGCTA	-7	True	NA	NA	False	AATAAA	-15	NA	137736090	137677088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_137677445_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_77343.known	chr5	-	582	2	FSM	ENSG00000031003.11	ENST00000510804.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTTATTTTTGTAAAC	5722	False	NA	NA	False	NA	NA	NA	138032928	138020762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138021198_138032781
transcript_77345.known	chr5	-	4275	3	FSM	ENSG00000250159.7	ENST00000508281.3	4275	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137889394	137879723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_137883622_137888159_137888289_137889146
transcript_77347.nic	chr5	-	1174	6	NIC	ENSG00000112981.5	novel	1208	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	8.99777750336159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAAGTAATTTTTTGG	-19	True	NA	-6	True	AATAAA	-17	NA	138139426	138115174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138754_138139370
transcript_77348.known	chr5	-	1208	6	FSM	ENSG00000112981.5	ENST00000265191.4	1208	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	5.08330601085553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAAGTAATTTTTTGG	-21	True	NA	-6	True	AATAAA	-17	NA	138139428	138115174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138786_138139370
transcript_7735.known	chr1	+	655	5	FSM	ENSG00000260238.6	ENST00000567140.3	655	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	31.2289929392544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTCCTCTTCCCC	8	True	NA	-88	True	NA	NA	NA	156213008	156243214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156213177_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_77356.known	chr5	-	3198	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	201.778970248307	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-1	True	NA	0	True	AATAAA	-19	NA	138178630	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77362.known	chr5	-	2982	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_13	207.671230554451	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-4	True	NA	0	True	AATAAA	-19	NA	138178633	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77363.nic	chr5	-	3345	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_11	215.626552168326	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-25	True	NA	0	True	AATAAA	-19	NA	138178987	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77365.known	chr5	-	3005	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	223.499099550759	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	363	False	NA	0	True	AATAAA	-19	NA	138178599	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77367.nic	chr5	-	3371	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	105	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_11	209.182360633013	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	114	False	NA	0	True	AATAAA	-19	NA	138178848	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77369.nic	chr5	-	2777	20	NIC	ENSG00000112983.18	novel	2982	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_11	222.220187279079	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-9	True	NA	0	True	AATAAA	-19	NA	138178638	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77372.nic	chr5	-	2825	20	NIC	ENSG00000112983.18	novel	3005	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_11	230.502786590615	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-9	True	NA	0	True	AATAAA	-19	NA	138178638	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77374.nic	chr5	-	2963	20	NIC	ENSG00000112983.18	novel	2982	21	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_12	215.655247085639	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-5	True	NA	0	True	AATAAA	-19	NA	138178659	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77375.known	chr5	-	2967	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	223.548701988325	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTAGCCTTTG	293	False	NA	-15	True	AATAAA	-4	NA	138178669	138156896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77382.nic	chr5	-	2746	19	NIC	ENSG00000112983.18	novel	2982	21	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_10	230.806369597794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	2	True	NA	0	True	AATAAA	-19	NA	138178652	138156881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77387.known	chr5	-	3133	16	FSM	ENSG00000094880.11	ENST00000394886.7	3133	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	38.1325174737899	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTAATATAACTGTTT	4	True	NA	46	True	AATAAA	-16	NA	138213323	138187649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138189149_138189632_138189753_138189827_138189907_138191473_138191536_138191861_138191938_138192268_138192389_138192503_138192658_138198198_138198281_138198425_138198524_138198604_138198783_138201106_138201240_138201342_138201449_138202112_138202156_138206546_138206685_138212990_138213064_138213151
transcript_77392.known	chr5	-	557	6	FSM	ENSG00000112983.18	ENST00000515254.1	557	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	70.0782419870818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGATTCTGGAAGGGGA	0	True	NA	NA	False	NA	NA	NA	138178629	138170729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_77393.known	chr5	-	455	3	FSM	ENSG00000094880.11	ENST00000505120.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	202	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATAGCTTAGCAGTGGG	4	True	NA	NA	False	NA	NA	NA	138213323	138206470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138206681_138212990_138213064_138213151
transcript_77394.known	chr5	+	3095	19	FSM	ENSG00000112984.12	ENST00000394894.8	3095	19	0	0	0	0	multi-exon	TRUE	canonical	3	389	junction_8	57.2461923904977	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATCAAACATCATTC	-4	True	NA	82	True	ATTAAA	-26	NA	138179111	138187723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608_138181729_138182322_138182462_138182585_138182774_138182860_138182991_138183168_138183364_138183469_138183582_138183687_138183757_138183961_138184106_138184238_138184405_138184511_138184677_138184806_138184947_138185094_138185198_138185511_138185711_138185960_138186053_138186293_138186432_138187095
transcript_77396.nic	chr5	-	2141	14	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	50.4139081026012	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	6551	False	NA	-19	True	AATAAA	-16	NA	138331856	138285268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_77397.known	chr5	-	2093	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_13	51.7369312886993	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-2	True	NA	-19	True	AATAAA	-16	NA	138331804	138285268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
transcript_77398.nic	chr5	-	1833	14	NIC	ENSG00000158402.21	novel	2137	16	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	50.4139081026012	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGGCTACCAACTTGT	6551	False	NA	-9	True	ATTAAA	-16	NA	138331856	138285576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_77402.nnic	chr5	-	2039	13	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	76.9102561431179	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	6551	False	NA	-19	True	AATAAA	-16	NA	138331856	138285268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_7741.known	chr1	-	4559	22	FSM	ENSG00000198952.8	ENST00000361813.5	4559	22	0	0	0	0	multi-exon	TRUE	canonical	3	414	junction_17	45.4447909549963	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	-3	True	NA	-15	True	AATAAA	-15	NA	156282825	156249223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156266540_156266679_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_77410.known	chr5	-	1556	11	FSM	ENSG00000158402.21	ENST00000415130.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	93.0273615663693	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTACCAACTTGTATCC	8	True	NA	-5	True	ATTAAA	-20	NA	138331794	138285572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331215_138331594
transcript_77411.nic	chr5	-	1877	11	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	93.7405461900025	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-5	True	NA	-19	True	AATAAA	-16	NA	138331807	138285268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331219_138331594
transcript_77417.known	chr5	+	4143	5	FSM	ENSG00000120709.11	ENST00000239906.10	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	25.043711785596	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	1	True	NA	30	True	AATAAA	-33	NA	138338265	138349729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
transcript_77419.known	chr5	+	551	4	FSM	ENSG00000120709.11	ENST00000511595.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTCTCCTTTATCCAC	NA	False	NA	NA	False	AATAGA	-44	NA	138332104	138337146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873
transcript_77424.nic	chr5	+	1694	3	ISM	ENSG00000120709.11	ENST00000513056.5	923	5	-193	4043	58	14	5prime_fragment	FALSE	canonical	3	82	junction_1	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAAAAAAACTTT	474	False	NA	NA	False	NA	NA	NA	138338072	138343037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_138338308_138341183_138341414_138341808
transcript_77425.known	chr5	+	1882	2	FSM	ENSG00000120709.11	ENST00000511024.5	1882	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	1	True	NA	NA	False	NA	NA	NA	138338265	138343023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138338308_138341183
transcript_77429.known	chr5	+	2131	8	FSM	ENSG00000132563.17	ENST00000378339.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	40.2400957519046	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTGGCCTCTGTGCT	-12	True	NA	30	True	AATAAA	-19	NA	138439056	138446965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138439241_138441015_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445227_138445376_138445467_138445599_138445682
transcript_77433.known	chr5	-	3682	11	FSM	ENSG00000120705.13	ENST00000360541.10	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_10	75.1998005316504	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-13	True	NA	NA	False	ATTAAA	-16	NA	138543236	138506094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
transcript_77437.known	chr5	-	4316	17	FSM	ENSG00000113013.16	ENST00000677553.1	4316	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	657.110328921255	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	368	False	NA	NA	False	CATAAA	-25	NA	138575318	138553755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573846_138574067_138574127_138575237
transcript_77439.known	chr5	-	2868	17	FSM	ENSG00000113013.16	ENST00000678551.1	2868	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	662.193487467032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTCAAGATTTGGAAG	-30	True	NA	-62	True	AATACA	-26	NA	138575421	138555218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556822_138557449_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_77442.known	chr5	-	4345	16	FSM	ENSG00000113013.16	ENST00000649578.2	4345	16	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_11	664.778425910134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-25	True	NA	NA	False	CATAAA	-25	NA	138575416	138553755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_77444.known	chr5	-	3142	16	FSM	ENSG00000113013.16	ENST00000524109.2	3142	16	0	0	0	0	multi-exon	FALSE	canonical	3	2438	junction_4	142.578570931571	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTAGCCTGTCATTTTT	11	True	NA	-6	True	TATAAA	-17	NA	138575675	138555826	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_77445.known	chr5	-	4196	16	FSM	ENSG00000113013.16	ENST00000677064.1	4196	16	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_6	641.95731945356	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-30	True	NA	NA	False	CATAAA	-25	NA	138575421	138553755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_77448.known	chr5	-	2272	11	FSM	ENSG00000113013.16	ENST00000508003.2	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	2499	junction_1	118.330722975903	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGACTTACCCAA	-28	True	NA	NA	False	NA	NA	NA	138575419	138559102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_77453.known	chr5	-	664	4	FSM	ENSG00000113013.16	ENST00000506477.5	664	4	0	0	0	0	multi-exon	FALSE	canonical	3	2673	junction_3	70.9240595441506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCATTTTTGGCCA	-20	True	NA	NA	False	NA	NA	NA	138575411	138570798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138571142_138573762_138573851_138574067_138574127_138575237
transcript_77454.known	chr5	+	3754	18	FSM	ENSG00000044115.21	ENST00000302763.12	3754	18	0	0	0	0	multi-exon	TRUE	canonical	3	1416	junction_4	142.057179383982	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGAGCCCAAAGTCGTC	-10	True	NA	26	True	AATAAA	-22	NA	138753424	138935034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_77466.known	chr5	+	224	2	FSM	ENSG00000044115.21	ENST00000521941.1	224	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGGATTTAAGTCTTA	10	True	NA	NA	False	AAGAAA	-23	NA	138753444	138762098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_138753511_138761940
transcript_77468.known	chr5	-	587	2	FSM	ENSG00000253404.1	ENST00000520838.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCATCTCAGACCCG	142	False	NA	-13	True	AATAAA	-15	NA	138753309	138744433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138744763_138753051
transcript_77470.known	chr5	-	1889	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.8973307677818	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCACACTAGTGCT	-2	True	NA	NA	False	ATTAAA	-17	NA	139198368	138946723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
transcript_77481.known	chr5	+	3970	18	FSM	ENSG00000280987.4	ENST00000361059.7	3970	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	1061.14825513552	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	-13	True	NA	5	True	AATAAA	-7	NA	139274102	139330394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_77488.known	chr5	+	2243	17	FSM	ENSG00000280987.4	ENST00000504203.5	2243	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	1096.83571688916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAACAAAACCAATAG	-12	True	NA	-23	True	AAGAAA	-23	NA	139274103	139329757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_77490.known	chr5	+	3249	17	FSM	ENSG00000280987.4	ENST00000509990.5	3249	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1019.7032177765	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTTAATGATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	139273751	139329404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_77493.nic	chr5	+	4109	15	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	264	junction_12	710.565831588044	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	1642	False	NA	52	True	NA	NA	NA	139293607	139330441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325295_139325663_139326162_139326285_139329344
transcript_77494.known	chr5	+	5069	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	0	0	0	0	multi-exon	FALSE	canonical	3	1711	junction_1	426.552057975654	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	-3	True	NA	12	True	AATGAA	-20	NA	139293739	139331677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_775.known	chr1	-	864	9	FSM	ENSG00000116670.15	ENST00000376669.9	864	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	1040.83776353474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCCTCTGTGTGTGGAT	20	True	NA	NA	False	NA	NA	NA	11681118	11674677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_77502.known	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	683.254550378002	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	35	False	NA	52	True	NA	NA	NA	139293777	139330441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_77509.nic	chr5	+	2806	14	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	231	junction_1	718.34493371011	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	-1	True	NA	52	True	NA	NA	NA	139293677	139330441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_139293806_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_7751.nic	chr1	-	1489	6	NIC	ENSG00000198715.13	novel	1611	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	146.720141766562	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	NA	False	NA	-5	True	AATAGA	-20	NA	156295704	156292687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156293210_156293319_156293430_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_77514.known	chr5	+	2518	14	FSM	ENSG00000015479.20	ENST00000503811.5	2518	14	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	660.11611852827	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGCTAGATTTCGTA	7	True	NA	NA	False	AAGAAA	-42	NA	139293749	139330002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139294029_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_7754.nnic	chr1	-	1443	6	NNC	ENSG00000198715.13	novel	1611	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	197.612347792338	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-15	True	NA	-5	True	AATAGA	-20	NA	156295685	156292687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294675_156294760_156295525
transcript_7755.known	chr1	-	1611	6	FSM	ENSG00000198715.13	ENST00000362007.6	1611	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	68.0352849630249	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-9	True	NA	-5	True	AATAGA	-20	NA	156295679	156292687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_77552.nnic	chr5	+	866	7	NNC	ENSG00000281398.4	novel	801	7	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	84.5742605971554	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	-16	True	NA	13	True	AATAAA	-14	NA	139274099	139284900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738_139282869_139284541
transcript_77558.known	chr5	+	865	6	FSM	ENSG00000281398.4	ENST00000507197.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	72.8516300435344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTGAGTTAGAATCT	2	True	NA	NA	False	NA	NA	NA	139274117	139283244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738
transcript_77571.known	chr5	+	1264	5	FSM	ENSG00000281398.4	ENST00000648842.1	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	62.1384542775245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCGATTTTTTTTTT	-14	True	NA	13	True	AATAAA	-17	NA	139274101	139280947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_77572.known	chr5	+	2383	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	77.5806032459145	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	15	True	NA	12	True	AATAAA	-13	NA	139274130	139284899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
transcript_77578.known	chr5	+	679	4	FSM	ENSG00000281398.4	ENST00000514110.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	21.3541565040626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCCTGGGTTCAAGC	15	True	NA	NA	False	NA	NA	NA	139274130	139279586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050
transcript_77585.known	chr5	+	1456	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	0	0	0	0	multi-exon	FALSE	canonical	3	3843	junction_3	248.415422673839	3135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	-6	True	NA	14	True	AATAAA	-16	NA	139341853	139369717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
transcript_77588.known	chr5	+	815	3	FSM	ENSG00000120727.13	ENST00000510409.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	3987	junction_2	220	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATTGCACCATTGCAC	-3	True	NA	NA	False	NA	NA	NA	139341856	139365090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139341981_139363758_139363923_139364563
transcript_7759.known	chr1	-	1365	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	151.763590824677	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-19	True	NA	-4	True	AATAGA	-21	NA	156295689	156292686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_77591.known	chr5	-	680	6	FSM	ENSG00000170469.11	ENST00000450845.7	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	19.2208220427743	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCTCTGCCTTCTC	-3	True	NA	-5	True	AATAAA	-33	NA	139404089	139396766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139396930_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
transcript_77593.known	chr5	-	646	4	FSM	ENSG00000170469.11	ENST00000451821.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	4.32049379893857	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTCTTAGTCCACCT	19	False	NA	-3	True	CATAAA	-34	NA	139404067	139401500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139401826_139401914_139402046_139402627_139402694_139403943
transcript_77598.known	chr5	-	5102	8	FSM	ENSG00000170464.10	ENST00000302060.10	5102	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	11.9146625497103	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACTTTTCCTTGGTTC	-16	True	NA	-8	True	ATTAAA	-20	NA	139439525	139410202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139414273_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_776.known	chr1	-	1002	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	1048.27068903981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGAGTTGTTTCAAT	-2	True	NA	1	True	NA	NA	NA	11691477	11674524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_77600.nic	chr5	-	1137	8	NIC	ENSG00000170464.10	novel	655	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	65.9121245543284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAGCTCTTCAGTCA	-16	True	NA	NA	False	ATTAAA	-18	NA	139439525	139419067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_139419173_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_77607.known	chr5	-	1031	10	FSM	ENSG00000249751.4	ENST00000618155.3	1031	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	2.23330569358242	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATTACTTTTAAGGTC	-17	True	NA	-14	True	ATTAAA	-19	NA	139462743	139448559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_139448909_139449077_139449175_139454601_139454639_139454824_139454924_139455322_139455437_139456473_139456519_139457544_139457605_139457756_139457808_139458138_139458184_139462609
transcript_77608.nic	chr5	+	714	8	NIC	ENSG00000131508.16	novel	1113	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	1056.34491120494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCCTTTTGATTTCCA	7	True	NA	37	True	AATAAA	-21	NA	139561739	139626855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_139561816_139562243_139562408_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_77610.known	chr5	+	656	7	FSM	ENSG00000131508.16	ENST00000511725.5	656	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	909.253799674339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCCTTTTGATTTCCA	191	False	NA	37	True	AATAAA	-21	NA	139526430	139626855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139526613_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_77612.known	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	1957	junction_1	302.144005401398	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	-15	True	NA	10	True	AATAAA	-24	NA	139561338	139628434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_77614.known	chr5	+	1113	7	FSM	ENSG00000131508.16	ENST00000505548.5	1113	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	887.555632059197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGGTGGGTATGGTGTG	249	False	NA	NA	False	NA	NA	NA	139562028	139627115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139562408_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_77615.nic	chr5	+	1540	3	NIC	ENSG00000171604.12	novel	568	2	NA	NA	-111	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAATTTAAACTGCTT	9055	False	NA	37	True	CATAAA	-9	NA	139647792	139683106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_139648005_139680363_139681448_139682862
transcript_77616.known	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	50	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	-28	True	NA	35	True	AATAAA	-25	NA	139648348	139683882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139648846_139680363_139681448_139682862
transcript_77618.known	chr5	+	1892	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	257	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTCGTTTATCCATT	-19	True	NA	NA	False	AATGAA	-2	NA	139648932	139683593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_139649010_139680363_139681448_139682862
transcript_7762.known	chr1	-	1364	5	FSM	ENSG00000198715.13	ENST00000622703.4	1364	5	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_4	130.34833140474	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-19	True	NA	-4	True	AATAGA	-21	NA	156295689	156292686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156295525
transcript_77621.known	chr5	+	790	3	FSM	ENSG00000120306.11	ENST00000261811.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	29	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	28	True	NA	17	True	AATAAA	-17	NA	140175187	140243789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140175286_140194445_140194653_140243304
transcript_77624.known	chr5	+	462	3	FSM	ENSG00000120306.11	ENST00000644078.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTTTCTTTGACA	3	True	NA	NA	False	AATAAA	-23	NA	140175216	140228915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140175286_140194445_140194653_140228729
transcript_77625.known	chr5	-	1336	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_3	54.3098108591399	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGACTGTGATCTG	-5	True	NA	14	True	NA	NA	NA	140303101	140245034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
transcript_77627.known	chr5	-	1091	3	FSM	ENSG00000113068.10	ENST00000510217.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	342.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTGCAAATTATGTT	-17	True	NA	-76	True	NA	NA	NA	140303113	140245124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140246058_140281448_140281534_140303040
transcript_77628.known	chr5	-	787	3	FSM	ENSG00000113068.10	ENST00000507185.1	787	3	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_2	32	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGATGGTGCTCCAAT	10	True	NA	NA	False	NA	NA	NA	140303086	140280959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140281534_140300415_140300583_140303040
transcript_77631.known	chr5	-	2358	6	FSM	ENSG00000113070.8	ENST00000230990.7	2358	6	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_5	2.33238075793812	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGTCTGTTTGTTTT	1	True	NA	0	True	AATAAA	-19	NA	140346603	140332842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140334281_140334657_140334749_140335871_140336028_140342634_140342813_140345910_140346085_140346282
transcript_77633.nnic	chr5	+	1680	12	NNC	ENSG00000131503.21	novel	4814	27	NA	NA	301	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	95.0117870025687	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGTTTCCTTAGTCTT	340	False	NA	18	True	AATAAA	-20	NA	140402221	140472475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140472380
transcript_77634.nnic	chr5	+	1628	12	NNC	ENSG00000131503.21	novel	4814	27	NA	NA	311	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	114.82419188186	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGTTTCCTTAGTCTT	350	False	NA	18	True	AATAAA	-20	NA	140402231	140472475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_140402274_140436103_140436258_140438502_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140472380
transcript_77636.known	chr5	+	2135	11	FSM	ENSG00000131503.21	ENST00000394723.7	2135	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	32.698012171996	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	24	False	NA	20	True	AATAAA	-22	NA	140401853	140472477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_77637.known	chr5	+	2035	11	FSM	ENSG00000131503.21	ENST00000394722.7	2035	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	99.6682497087212	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	39	False	NA	20	True	AATAAA	-22	NA	140401920	140472477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140402274_140436103_140436258_140438493_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_7764.known	chr1	+	2191	4	FSM	ENSG00000163472.19	ENST00000295694.9	2191	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	17	False	NA	13	True	AATAAA	-13	NA	156282947	156292443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156283066_156285183_156285984_156286259_156286474_156291384
transcript_77640.known	chr5	+	3511	9	FSM	ENSG00000131503.21	ENST00000435794.5	3511	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	72.5327512231544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTGTGATCCTTTCAG	NA	False	NA	25	True	AATAAA	-21	NA	140526032	140539856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538235_140538918_140539084_140539358
transcript_77643.nnic	chr5	+	2348	16	ISM	ENSG00000131503.21	ENST00000421134.5	4814	27	313	29382	242	213	5prime_fragment	FALSE	canonical	3	95	junction_11	101.200570925047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAATATTGA	281	False	NA	45	True	AAAAAG	-21	NA	140402162	140496760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519
transcript_77645.known	chr5	+	8246	36	FSM	ENSG00000254996.5	ENST00000532219.5	8246	36	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_30	88.5058466879968	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	26	False	NA	1	True	AGTAAA	-6	NA	140401907	140549569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
transcript_77647.known	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_4	185.576803507335	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-22	True	NA	-23	True	NA	NA	NA	140557473	140550067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
transcript_77649.known	chr5	-	978	5	FSM	ENSG00000213523.12	ENST00000520427.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	535.818066138125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACACCATCTCCTAT	6945	False	NA	NA	False	NA	NA	NA	140557677	140550681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557333_140557427
transcript_7765.nic	chr1	-	1116	4	NIC	ENSG00000198715.13	novel	1365	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	180.577468755718	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	NA	False	NA	-4	True	AATAGA	-21	NA	156295698	156292686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156293210_156294017_156294237_156294364_156294566_156295525
transcript_77651.nic	chr5	-	743	4	NIC	ENSG00000213523.12	novel	1328	5	NA	NA	-19	65	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	501.048456294953	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCCCCTCTGGTGTCC	7130	False	NA	-8	True	NA	NA	NA	140557492	140550468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_140550912_140551060_140551170_140557146_140557273_140557427
transcript_77652.known	chr5	+	693	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	34.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	4	True	NA	8	True	AGTAAA	-13	NA	140547661	140549576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140547841_140548905_140549077_140549233
transcript_77653.known	chr5	-	769	3	FSM	ENSG00000213523.12	ENST00000602875.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	609.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTACTCATAACATGC	5	True	NA	-91	True	NA	NA	NA	140557446	140550551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140557146
transcript_77655.known	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_2	64.546279693118	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-5	True	NA	-23	True	NA	NA	NA	140557456	140550067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
transcript_77656.known	chr5	-	2131	13	FSM	ENSG00000113108.20	ENST00000357560.9	2131	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	27.6810956350278	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	-21	True	NA	-1	True	AATAAA	-19	NA	140564598	140558267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140561850_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_77659.known	chr5	+	2666	3	FSM	ENSG00000176087.16	ENST00000323146.8	2666	3	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	145	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	2	True	NA	19	True	AATAAA	-40	NA	140564827	140569100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140564859_140565872_140565972_140566564
transcript_77660.known	chr5	+	2789	3	FSM	ENSG00000176087.16	ENST00000612662.2	2789	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	368.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCCATGATTGTCT	-7	True	NA	8	True	AATAAA	-29	NA	140564818	140569089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140564859_140565747_140565972_140566564
transcript_77663.known	chr5	+	1905	20	FSM	ENSG00000113141.19	ENST00000417647.7	1905	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	626	junction_7	72.4596745240618	788	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTTGAGCATGTC	-18	True	NA	52	True	ATTAAA	-17	NA	140647828	140662480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757_140660816_140661619_140661709_140661898_140662008_140662178_140662214_140662301
transcript_7767.known	chr1	-	543	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGCTGCAGTGTGTT	4120	False	NA	-12	True	TATAAA	-17	NA	156291550	156290095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156290361_156290976_156291107_156291402
transcript_77671.known	chr5	+	1834	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	27.9610118167813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	-4	True	NA	23	True	AATAAA	-23	NA	140639503	140645408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_77673.known	chr5	+	1865	12	FSM	ENSG00000113119.13	ENST00000394671.8	1865	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	14.4159003124391	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTTGCCTCAGTGGTT	-1	True	NA	19	True	AATAAA	-19	NA	140639450	140645404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_7768.known	chr1	-	524	2	FSM	ENSG00000198715.13	ENST00000480968.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATTTTTTTGTATTTT	-1	True	NA	NA	False	NA	NA	NA	156291506	156290686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156291107_156291402
transcript_77690.known	chr5	-	649	3	FSM	ENSG00000131495.9	ENST00000252102.9	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_1	33.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGGTCCTCCTGCCT	-12	True	NA	76	True	NA	NA	NA	140647630	140645284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140645679_140647255_140647363_140647482
transcript_77691.known	chr5	-	627	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	771.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCAGCTGCTGAAGC	133	False	140647654	-8	True	AATAAA	-21	NA	140647645	140645368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140645726_140647255_140647363_140647482
transcript_77695.known	chr5	+	2363	15	FSM	ENSG00000112855.17	ENST00000645065.1	2363	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	51.7892117045586	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATAACATGTTAAATA	-12	True	NA	-22	True	NA	NA	NA	140691452	140699271	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691516_140691606_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_77698.known	chr5	+	2469	14	FSM	ENSG00000112855.17	ENST00000646468.1	2469	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	47.7261666410421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	-7	True	NA	-2	True	NA	NA	NA	140691457	140699291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_7770.known	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	1172.64908760168	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	11	True	NA	NA	False	NA	NA	NA	156338257	156309164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
transcript_77702.known	chr5	+	2468	13	FSM	ENSG00000112855.17	ENST00000230771.9	2468	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	17.5093229134907	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGGTAATTTGTTA	-10	True	NA	12	True	AATAAA	-13	NA	140691454	140699305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_77706.known	chr5	-	1948	13	FSM	ENSG00000170445.16	ENST00000504156.7	1948	13	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_6	40.7726590035801	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGTGTGTCAGTGATG	-17	True	NA	-3	True	AATAAA	-17	NA	140691370	140673904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_77707.known	chr5	-	1896	13	FSM	ENSG00000170445.16	ENST00000457527.6	1896	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	125.512587903454	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-24	True	NA	-2	True	AATAAA	-18	NA	140691377	140673903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_77708.known	chr5	+	2346	12	FSM	ENSG00000112855.17	ENST00000642752.1	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	41.7705262057367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTTAAATAAAATATTAA	-12	True	NA	-13	True	NA	NA	NA	140691452	140699280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_7771.known	chr1	-	1885	13	FSM	ENSG00000163468.15	ENST00000368258.7	1885	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	926.393260026336	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	5	True	NA	-22	True	ATTAAA	-14	NA	156338263	156308968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156338153
transcript_77712.known	chr5	-	1789	12	FSM	ENSG00000170445.16	ENST00000438307.6	1789	12	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_10	140.007791990952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACGGAGTCTGCGTGT	12	True	NA	-13	True	AATAAA	-7	NA	140691341	140673914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140690854_140690945_140691214
transcript_77717.known	chr5	-	1401	11	FSM	ENSG00000170445.16	ENST00000415192.6	1401	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	145.350232197957	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATATGTACTTCAA	12	True	NA	-93	True	NA	NA	NA	140691341	140674200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140683099_140683220_140690854_140690945_140691214
transcript_7772.known	chr1	+	595	4	FSM	ENSG00000163467.12	ENST00000368254.6	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	2.94392028877595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGTGTTGTTTTCCTC	-3	True	NA	NA	False	AGTAAA	-17	NA	156338525	156346995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346767
transcript_77721.known	chr5	-	2643	10	FSM	ENSG00000170445.16	ENST00000431330.7	2643	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	158.927268092074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	NA	False	NA	NA	False	NA	NA	NA	140691537	140673034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140690854_140690945_140691214
transcript_77722.known	chr5	-	2507	10	FSM	ENSG00000170445.16	ENST00000675851.1	2507	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	160.220989361877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-36	True	NA	NA	False	NA	NA	NA	140691389	140673034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140683099_140683220_140690854_140690945_140691214
transcript_77724.known	chr5	+	3852	7	FSM	ENSG00000120314.19	ENST00000358337.10	3852	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	16.4991582276861	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTCTAAGATCTTG	-1	True	NA	26	True	AGTAAA	-19	NA	140664903	140672345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332
transcript_77727.known	chr5	+	1544	6	FSM	ENSG00000146007.11	ENST00000274712.8	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_5	25.7013618316229	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTGTGAATATTTGT	-1	True	NA	47	True	NA	NA	NA	140700446	140706686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140703992_140704425_140704572_140705612
transcript_7773.known	chr1	+	601	4	FSM	ENSG00000163467.12	ENST00000470342.5	601	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTATTGTGTTGTTTTCC	-22	True	NA	NA	False	AGTAAA	-15	NA	156338506	156346993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346778
transcript_77731.known	chr5	+	735	6	FSM	ENSG00000146007.11	ENST00000506644.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	89.1448259855837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGGGGGCTCATGGT	16	False	NA	NA	False	NA	NA	NA	140700463	140705881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140704005_140704425_140704572_140705612
transcript_77732.known	chr5	-	1145	4	FSM	ENSG00000170445.16	ENST00000518126.6	1145	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	38.2883794381533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCACATAGCAAAGGTAT	10	True	NA	NA	False	AATAAA	-18	NA	140691343	140679077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140679884_140683099_140683220_140690854_140690945_140691214
transcript_77733.known	chr5	-	1229	3	FSM	ENSG00000170445.16	ENST00000502888.2	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACAGAGGTCTTGCTA	0	True	NA	NA	False	AATACA	-3	NA	140691353	140682219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140683220_140690854_140690945_140691214
transcript_77734.known	chr5	-	2229	3	FSM	ENSG00000170445.16	ENST00000674819.1	2229	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	265.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATTGTTCACCAAATC	-24	True	NA	NA	False	NA	NA	NA	140691377	140688797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_140690774_140690854_140690945_140691214
transcript_77735.known	chr5	+	2436	14	FSM	ENSG00000112855.17	ENST00000642970.1	2436	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.8236216592744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	-10	True	NA	-2	True	NA	NA	NA	140691454	140699291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140691516_140691794_140692018_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_77736.known	chr5	+	2808	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	6	True	NA	NA	False	NA	NA	NA	140807080	140817546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140809573_140817230
transcript_77737.known	chr5	+	5725	4	FSM	ENSG00000243232.6	ENST00000289269.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	55.4396568852618	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-12	True	NA	NA	False	AATAAA	-20	NA	140966475	141012347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_140969332_140978948_140979008_140982474_140982564_141009626
transcript_77738.known	chr5	-	2295	1	FSM	ENSG00000178913.9	ENST00000313368.8	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	666	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-11	True	NA	-5	True	AATAAA	-25	NA	141320784	141318489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_141318500_141320800
transcript_77739.nnic	chr5	+	1539	2	NIC	ENSG00000288095.1	novel	1508	3	NA	NA	-142	24	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGAAATGATCATTTT	88	False	NA	NA	False	AATAAA	-15	NA	141320837	141326009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_141321104_141324736
transcript_7774.known	chr1	+	512	4	FSM	ENSG00000163467.12	ENST00000368253.6	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	-26	True	NA	NA	False	AGTAAA	-12	NA	156338502	156346990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156338606_156339734_156339792_156344579_156344709_156346767
transcript_77740.known	chr5	+	2346	4	FSM	ENSG00000240184.7	ENST00000617641.4	2346	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	98.9376908294643	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTTTCTGTATAAGCG	10	True	NA	26	True	AATAAA	-19	NA	141475979	141512977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141476147_141494806_141494866_141505392_141505482_141510946
transcript_77741.known	chr5	-	1933	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_2	92.1940334073652	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	-3	True	NA	-23	True	AATAAA	-21	NA	141636849	141620880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
transcript_77745.known	chr5	+	621	3	FSM	ENSG00000228737.2	ENST00000422040.2	621	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTCCCCCCTCTGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	141618413	141626481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141618490_141625846_141625966_141626055
transcript_77746.known	chr5	-	777	5	FSM	ENSG00000171720.10	ENST00000491581.5	777	5	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_1	103.846942660822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACAGTTTGTGTGGTTTT	8957	False	NA	-3	True	TATAAA	-19	NA	141627936	141624861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892
transcript_77749.nic	chr5	-	2750	21	NIC	ENSG00000197948.11	novel	4319	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_3	18.9509894200804	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCCTACGGTGCTATTG	84	False	NA	-5	True	NA	NA	NA	141651428	141640981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_141641564_141641701_141641758_141642396_141642504_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649531_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_77755.known	chr5	+	2154	8	FSM	ENSG00000164620.9	ENST00000444782.5	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	52.0156962181727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	-31	True	NA	13	True	AATAAA	-16	NA	141636949	141641063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_77756.known	chr5	+	1419	7	FSM	ENSG00000164620.9	ENST00000518856.1	1419	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	74.0197045837571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCATTACAGCTGCTT	8	True	NA	3	True	AATAAA	-6	NA	141637441	141641053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141637749_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_77757.known	chr5	+	2536	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	32.2783036866699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	16	True	NA	14	True	AATAAA	-17	NA	141636996	141641064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_77760.known	chr5	+	2461	6	FSM	ENSG00000164620.9	ENST00000518025.5	2461	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	70.9743615681043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	24	True	NA	14	True	AATAAA	-17	NA	141637004	141641064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141638410_141638794_141638861_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_77762.nnic	chr5	+	2394	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	63.1337455128809	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	NA	False	NA	14	True	AATAAA	-15	NA	141923790	141940146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939505
transcript_77764.nnic	chr5	+	2347	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	6	combination_of_known_splicesites	FALSE	canonical	3	51	junction_12	48.3034390310071	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTGCCCTTGAGTAT	NA	False	NA	20	True	AATAAA	-21	NA	141923790	141940152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
transcript_77765.known	chr5	+	2203	13	FSM	ENSG00000081791.9	ENST00000194118.8	2203	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	57.2763161253313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	20	True	NA	-12	True	NA	NA	NA	141923854	141940120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939553
transcript_77767.known	chr5	+	4907	12	FSM	ENSG00000081791.9	ENST00000432126.7	4907	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	26.3247361912174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTCTGATCATGTC	-2	True	NA	8	True	AATAAA	-19	NA	141923870	141942047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520
transcript_77770.nnic	chr5	+	1979	11	NIC	ENSG00000081791.9	novel	4907	12	NA	NA	-12	303	intron_retention	FALSE	canonical	2	9	junction_10	62.2919738008036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTAGTTTGATAGATG	8	True	NA	7	True	TATAAA	-18	NA	141923842	141939251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141938520
transcript_77774.nic	chr5	+	1658	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-12	5124	-12	0	5prime_fragment	FALSE	canonical	3	184	junction_9	16.1986129569292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACAGGGTGGTTGTGAG	8	True	NA	35	True	TTTAAA	-36	NA	141923842	141934996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_77775.nic	chr5	+	2197	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-64	4637	-64	487	5prime_fragment	FALSE	canonical	3	184	junction_9	16.1986129569292	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTACATAGGGGACTG	NA	False	NA	17	True	ATTAAA	-27	NA	141923790	141935483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_77776.nic	chr5	+	2210	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-12	4572	-12	552	5prime_fragment	FALSE	canonical	3	184	junction_9	16.1986129569292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGGGCATCAGAATGCT	8	True	NA	82	True	AATACA	-18	NA	141923842	141935548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_77778.nic	chr5	+	1540	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-119	433	-64	11	5prime_fragment	FALSE	canonical	3	197	junction_5	12.5795428358579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGTCTCTCTCTCTCTC	NA	False	NA	25	True	ATTAAA	-36	NA	141923790	141933893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_77782.known	chr5	+	4170	9	FSM	ENSG00000013561.18	ENST00000394520.7	4170	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	26.3008436176485	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTCATGAAAGCCTT	-8	True	NA	9	True	AATAAA	-16	NA	141969104	141990292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_77789.known	chr5	+	4213	8	FSM	ENSG00000013561.18	ENST00000347642.7	4213	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	46.2592516946279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATTTCATGAAAGCC	2042	False	NA	7	True	AATAAA	-14	NA	141968885	141990290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141969168_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_7779.known	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3026	junction_10	209.514400516214	6296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-24	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_77794.known	chr5	+	2905	8	FSM	ENSG00000013561.18	ENST00000394514.6	2905	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	41.0494972501466	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	-2	True	NA	20	True	AATAAA	-28	NA	141969110	141989185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_7780.known	chr1	-	1815	12	FSM	ENSG00000163468.15	ENST00000368259.6	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	955.14318947302	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	23	True	NA	-22	True	ATTAAA	-14	NA	156338245	156308968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156335826_156335889_156338153
transcript_7781.known	chr1	-	748	8	FSM	ENSG00000163468.15	ENST00000496684.6	748	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	1145.02522920249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCATTGTGCTGCTGGAT	39	True	NA	NA	False	NA	NA	NA	156338229	156318920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156319018_156320838_156321026_156324971_156325087_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_77813.known	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	336.025266299778	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-3	True	NA	-29	True	ATTAAA	-16	NA	142013030	142000673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
transcript_77816.known	chr5	-	754	7	FSM	ENSG00000113552.16	ENST00000504139.5	754	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	285.8096200076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAGAAAGAAACTGA	-4	True	NA	NA	False	NA	NA	NA	142013031	142002085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142002130_142003087_142003215_142004985_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_77817.known	chr5	-	925	7	FSM	ENSG00000113552.16	ENST00000505689.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	285.509729353582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTATCAAAGAGAAAGAAA	3154	False	NA	NA	False	NA	NA	NA	142013041	142002089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011848_142012042_142012994
transcript_77818.known	chr5	-	2267	7	FSM	ENSG00000113552.16	ENST00000311337.11	2267	7	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_6	121.525946017941	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCATTTGTGGATTTGA	0	True	NA	-26	True	ATTAAA	-19	NA	142013027	142000670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_77825.known	chr5	+	3574	8	FSM	ENSG00000131507.11	ENST00000253814.6	3574	8	0	0	0	0	multi-exon	TRUE	canonical	3	479	junction_7	32.1951954838746	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATGAATATCTTTACT	-14	True	NA	NA	False	AATAAA	-34	NA	142108778	142154440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_142109038_142131807_142131896_142132211_142132343_142135729_142135818_142137733_142137859_142140562_142140630_142144570_142144677_142151730
transcript_77827.known	chr5	-	4904	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGTGTGTTTGTGTG	0	True	NA	-10	True	TATAAA	-31	NA	142325021	142310429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_142315156_142324843
transcript_77834.nnic	chr5	+	2767	5	NNC	ENSG00000236714.3	novel	2752	5	NA	NA	-12876	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	3.77491721763537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCTATAAATTTT	0	True	NA	6	True	CATAAA	-19	NA	142703352	142760998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_142703491_142745207_142745719_142756733_142756831_142757826_142757935_142759085
transcript_77836.known	chr5	+	1017	4	FSM	ENSG00000236714.3	ENST00000666541.1	1017	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.4243305140746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTCCATAATGAATGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	142745555	142759738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_142745719_142756706_142756831_142757826_142757904_142759085
transcript_77837.known	chr5	-	2594	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	4.12121038045863	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGTTGTTTTATTT	6	True	NA	NA	False	TATAAA	-19	NA	143404544	143281810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
transcript_77840.known	chr5	-	3144	6	FSM	ENSG00000145817.17	ENST00000274496.10	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	30.0039997333689	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTATGTGGCGCTTTTTT	-26	True	NA	-4	True	ATTAAA	-25	NA	144170659	144158161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170534
transcript_77846.known	chr5	-	2255	6	FSM	ENSG00000145817.17	ENST00000448443.6	2255	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	115.929978866555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGTGTTATTGAAT	3	True	NA	-4	True	ATTAAA	-15	NA	144170630	144159272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170283
transcript_77848.known	chr5	-	1102	8	FSM	ENSG00000186314.12	ENST00000394450.6	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	17.38988681002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATGTAAGATATGTGT	17	True	NA	-14	True	AATAAA	-9	NA	145835336	145760255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145825997_145826201_145835176
transcript_77850.known	chr5	-	4817	7	FSM	ENSG00000186314.12	ENST00000683046.1	4817	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	8.40138877408571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	11	True	NA	-2	True	AATAAA	-15	NA	145835342	145756343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145835176
transcript_77853.known	chr5	-	7331	32	FSM	ENSG00000133706.19	ENST00000674170.1	7331	32	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	296.453645259628	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	146182683	146110565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149551_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77854.known	chr5	-	4768	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	286.355967031103	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-40	True	NA	-29	True	AATAAA	-14	NA	146182670	146113042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_7786.nnic	chr1	+	1022	4	NIC	ENSG00000132677.13	novel	1927	9	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	2.86744175568088	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	NA	False	NA	9	True	GATAAA	-16	NA	156369166	156385219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_156369437_156382747_156382870_156384413_156384601_156384776
transcript_77860.known	chr5	-	4669	32	FSM	ENSG00000133706.19	ENST00000674277.1	4669	32	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_31	373.602071466916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-15	True	NA	-29	True	AATAAA	-14	NA	146182645	146113042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182561
transcript_77864.known	chr5	-	7090	31	FSM	ENSG00000133706.19	ENST00000674270.1	7090	31	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_27	285.437226023516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-20	True	NA	NA	False	NA	NA	NA	146182650	146110565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77865.known	chr5	-	3737	31	FSM	ENSG00000133706.19	ENST00000510191.5	3737	31	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_30	301.871401979938	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGGTGTCCAAGAGAAAT	7	True	NA	-16	True	AATAAA	-16	NA	146182623	146113910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146182487
transcript_77874.known	chr5	-	9858	31	FSM	ENSG00000133706.19	ENST00000674218.1	9858	31	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_18	156.308345550994	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-40	True	NA	NA	False	NA	NA	NA	146182670	146110565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77880.known	chr5	-	4783	15	FSM	ENSG00000133706.19	ENST00000674417.1	4783	15	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_2	120.910681319488	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATGGGGTTCTAACCT	-33	True	NA	NA	False	NA	NA	NA	146182663	146146511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77882.nic	chr5	-	857	7	ISM	ENSG00000133706.19	ENST00000618084.2	1954	14	-12	8903	-2	2125	5prime_fragment	FALSE	canonical	3	1232	junction_2	125.580540778507	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAACAAAATTAAATT	-42	True	NA	7	True	NA	NA	NA	146182672	146160402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77883.nic	chr5	-	602	5	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-22	5609	-2	-5609	5prime_fragment	FALSE	canonical	3	1318	junction_3	100.848896870516	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAGGTTTGATAGTG	-42	True	NA	NA	False	GATAAA	-7	NA	146182672	146168136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77885.known	chr5	-	1919	4	FSM	ENSG00000173261.9	ENST00000311450.9	1919	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTACTGTTCTTCTT	0	True	NA	-5	True	AATAAA	-15	NA	146105577	146084312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146084573_146085460_146085598_146098155_146098293_146104192
transcript_77886.known	chr5	-	2641	24	FSM	ENSG00000133706.19	ENST00000512412.2	2641	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	299.368314161051	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTAAGTTATTATCTT	-40	True	NA	NA	False	AATAAA	-4	NA	146182670	146130867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146130936_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_77888.known	chr5	+	3311	20	FSM	ENSG00000275740.1	ENST00000506502.2	3311	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	17.1574103903223	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCTCTAAGGCACATTT	-16	True	NA	NA	False	NA	NA	NA	146203549	146339251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146314895_146315019_146339102
transcript_7789.known	chr1	-	473	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGTAGTGGATATACCT	3	True	NA	0	True	AATAAA	-27	NA	156429423	156404251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156404602_156426797_156426873_156429375
transcript_77891.nic	chr5	+	1779	2	ISM	ENSG00000275740.1	ENST00000506502.2	3311	20	0	118763	0	-118763	5prime_fragment	FALSE	canonical	3	55	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATATATATATATATATA	-16	True	NA	NA	False	NA	NA	NA	146203549	146220488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_146203825_146218984
transcript_77892.nic	chr5	+	2754	17	ISM	ENSG00000091009.8	ENST00000265271.7	6537	21	-35	19772	-35	5932	5prime_fragment	FALSE	canonical	3	35	junction_9	6.10807610872687	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAACCAGAAGAAAGAG	4	True	NA	21	True	AAAACA	-5	NA	146203569	146269451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419
transcript_77893.known	chr5	+	6537	21	FSM	ENSG00000091009.8	ENST00000265271.7	6537	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	7.09559722644965	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	-1	True	NA	17	True	NA	NA	NA	146203604	146289223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146284621_146284733_146285946
transcript_77899.known	chr5	-	3047	1	FSM	ENSG00000173250.3	ENST00000311104.3	3047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTGTAAAGAAATAAAAAT	NA	False	NA	-55	True	AGTAAA	-36	NA	146516190	146513143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146513100_146516200
transcript_779.known	chr1	-	1053	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_8	689.030659695198	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-10	True	NA	-20	True	AATAAA	-23	NA	11681148	11674479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_7790.known	chr1	-	543	2	FSM	ENSG00000125462.19	ENST00000465270.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGTGGTAGTGGATA	8506	False	NA	-5	True	AATAAA	-22	NA	156421752	156404256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156404602_156421554
transcript_77901.nic	chr5	-	2166	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	91.8529259196461	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTCTTCTTGTTTTGT	-13	True	NA	-5	True	AATAAA	-17	NA	146878777	146589508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878590
transcript_77902.nic	chr5	-	2064	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	76.4397802194643	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTCTTCTTGTTTTGT	-21	True	NA	-5	True	AATAAA	-17	NA	146878785	146589508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_77904.known	chr5	-	10828	10	FSM	ENSG00000156475.19	ENST00000394411.9	10828	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	72.6530738221203	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTCTCTCTCTCTCTC	7	True	NA	NA	False	AATAAA	-16	NA	146878757	146580741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878590
transcript_77905.known	chr5	-	2093	10	FSM	ENSG00000156475.19	ENST00000530902.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	40.9281212751222	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	5496	False	NA	0	True	AATAAA	-22	NA	146878894	146589503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
transcript_77909.nnic	chr5	+	2075	3	Antisense	novelGene_ENSG00000156475.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAAAAATG	5	True	NA	NA	False	AAAAAG	-15	NA	147042278	147060654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr5_+_147042377_147055847_147056031_147058860
transcript_7791.known	chr1	-	6013	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_19	6.87677196767481	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-11	True	NA	-4	True	AATAAA	-18	NA	156572565	156525404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
transcript_77916.nnic	chr5	+	1174	6	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50980	28	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	35.8139637571716	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	5	True	NA	NA	False	AATAAA	-18	NA	147042278	147097268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164_147095187_147095396_147095521_147096605
transcript_77918.nnic	chr5	+	1384	5	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50980	28	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	31.42053468673	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	5	True	NA	NA	False	AATAAA	-18	NA	147042278	147097268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164_147095521_147096605
transcript_77923.nnic	chr5	+	774	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50980	-1667	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	23.4710223230453	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGGGCCAACTATGTTCA	5	True	NA	10	True	AATATA	-16	NA	147042278	147095573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164
transcript_77926.nnic	chr5	+	2441	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50980	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	23.4710223230453	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAATAAAATGGGTTAA	5	True	NA	NA	False	NA	NA	NA	147042278	147097240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164
transcript_77932.nnic	chr5	+	2285	3	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50980	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	51.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAATAAAATGGGTTAA	5	True	NA	NA	False	NA	NA	NA	147042278	147097240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147042377_147093945_147094057_147095164
transcript_77935.known	chr5	+	5333	13	FSM	ENSG00000169302.16	ENST00000397936.8	5333	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	5.57524289455924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGACCCTTCTTTGTC	-39	True	NA	13	True	ATTAAA	-21	NA	147235025	147387855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147351064_147351155_147361516_147361615_147370653_147370771_147373168_147373295_147375089_147375219_147383440_147383506_147383889
transcript_77936.known	chr5	+	798	7	FSM	ENSG00000169302.16	ENST00000626951.2	798	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	7.26674311886388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGCTAAGTCTCCTGT	41	True	NA	NA	False	ATTAAA	-19	NA	147235105	147348830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147348694
transcript_77937.nnic	chr5	-	2633	15	NNC	ENSG00000113657.13	novel	5309	14	NA	NA	-98	453	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_14	283.542135946569	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCTTCCACCTGCTTG	-7	True	NA	-26	True	ATTAAA	-15	NA	147454364	147393371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548_147453652_147454171
transcript_77938.known	chr5	-	5309	14	FSM	ENSG00000113657.13	ENST00000398514.7	5309	14	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_13	107.979945541074	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATTGTTCTCCAGTCTT	398	False	NA	-18	True	ATTAAA	-17	NA	147453959	147390810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
transcript_77948.nnic	chr5	+	910	5	NNC	ENSG00000280780.3	novel	2074	5	NA	NA	-126	-17170	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	87.8749110952609	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTGCTAGACACTGAAT	-2	True	NA	6	True	NA	NA	NA	147559867	147643644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147643367
transcript_77949.known	chr5	+	831	5	FSM	ENSG00000280780.3	ENST00000627433.3	2074	5	33	1210	13	-5	multi-exon	FALSE	canonical	3	83	junction_4	59.6741149913428	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAGAGCACTGGACAAA	32	False	NA	NA	False	NA	NA	NA	147560026	147660809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147660452
transcript_77954.nic	chr5	+	2176	5	NIC	ENSG00000280780.3	novel	2074	5	NA	NA	-126	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	66.1418929272515	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGAGCATCCGTCTC	-2	True	NA	6	True	AATAAA	-17	NA	147559867	147662010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_147560138_147594359_147594478_147595439_147595541_147636276_147636406_147660452
transcript_77955.nnic	chr5	+	1017	4	FSM	ENSG00000280780.3	ENST00000689846.1	900	4	-126	9	-126	-9	multi-exon	FALSE	canonical	3	21	junction_3	94.6056141157713	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAAAGTTTTGGAATT	-2	True	NA	1	True	AATAAA	-24	NA	147559867	147618963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147618450
transcript_77958.known	chr5	+	720	4	FSM	ENSG00000280780.3	ENST00000630514.2	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	85.2655981168386	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCACTGGACAAAAGGTA	19	False	NA	NA	False	NA	NA	NA	147560013	147660814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147660452
transcript_77960.known	chr5	+	1920	4	FSM	ENSG00000280780.3	ENST00000626945.2	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	81.3442615609048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTGAGCATCCGTCT	-1	True	NA	5	True	AATAAA	-16	NA	147559993	147662009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147560138_147594359_147594478_147595439_147595541_147660452
transcript_77962.known	chr5	-	9153	22	FSM	ENSG00000176049.16	ENST00000616793.5	9153	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	19.8324043685719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTTTCATTGTTTAT	6	True	NA	NA	False	AATAAA	-22	NA	147782728	147585437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_147591687_147601740_147601812_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_77964.known	chr5	-	6001	21	FSM	ENSG00000176049.16	ENST00000265272.9	6001	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	8.35224520712844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCTCTATTATCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	147782775	147588565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_77965.nic	chr5	-	2867	20	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	-18	23771	-18	20342	5prime_fragment	FALSE	canonical	3	66	junction_2	6.6806870116305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGACAAATAAAAGACT	NA	False	NA	NA	False	GATAAA	-12	NA	147782793	147612336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_77969.nic	chr5	-	1496	6	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	53	56286	6	3524	5prime_fragment	FALSE	canonical	3	72	junction_3	5.87877538267963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTATCACAGACTCT	12	True	NA	-2	True	ACTAAA	-27	NA	147782722	147644851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_7797.known	chr1	-	1159	8	FSM	ENSG00000160818.17	ENST00000438976.6	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	170.172061785256	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAAGCAGGAAAAGCA	5	True	NA	-16	True	NA	NA	NA	156601470	156595212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599031_156601408
transcript_77970.known	chr5	-	2992	21	FSM	ENSG00000176049.16	ENST00000333010.6	2992	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	24.7181613393877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGAACCAAAGTTAC	-34	True	NA	NA	False	NA	NA	NA	147782768	147591361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_147591687_147601740_147601812_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147782455
transcript_77973.nnic	chr5	-	692	6	NNC	ENSG00000164266.11	novel	413	4	NA	NA	-37204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.5213633723318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	5453	False	NA	NA	False	AATAAA	-16	NA	147868875	147824581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147850463_147850543_147868772
transcript_7798.known	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	402	junction_2	46.244249504613	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-4	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_77988.nnic	chr5	+	771	5	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	360.265440335317	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870559	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147870755_147871616_147871680_147872176_147872322_147881445_147881649_147882026
transcript_77997.nnic	chr5	+	1971	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-460	0	at_least_one_novel_splicesite	FALSE	canonical	3	315	junction_1	282.35556779824	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870221	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147871680_147872176_147872322_147881445_147881649_147882026
transcript_77998.nnic	chr5	+	1181	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-388	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	370.166028815299	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870293	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147870962_147872176_147872322_147881445_147881649_147882026
transcript_78.known	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	1156.46264098759	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_78004.nnic	chr5	+	784	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-399	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	372.317964469439	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147871098	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147871370_147872176_147872322_147881445_147881649_147882026
transcript_78007.nnic	chr5	+	578	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	250	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_1	367.157550197006	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147871747	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147871813_147872176_147872322_147881445_147881649_147882026
transcript_78013.nnic	chr5	+	911	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	-263	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	453.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870418	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147870962_147881445_147881649_147882026
transcript_78014.known	chr5	+	440	3	FSM	ENSG00000164265.9	ENST00000504320.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	472.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147870681	147882190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147870755_147881445_147881649_147882026
transcript_78015.nnic	chr5	+	1807	3	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	451.5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870679	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_147872119_147881445_147881649_147882026
transcript_78016.known	chr5	+	549	3	FSM	ENSG00000164265.9	ENST00000507160.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	455.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147871497	147882190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147871680_147881445_147881649_147882026
transcript_78024.known	chr5	+	672	3	FSM	ENSG00000164265.9	ENST00000514688.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	185.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147872017	147882191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_147872322_147881445_147881649_147882026
transcript_78027.known	chr5	+	4132	22	FSM	ENSG00000145868.17	ENST00000394370.7	4132	22	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_15	22.306563304102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	2	True	NA	21	True	AATAAA	-18	NA	148384001	148442836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427723_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_78029.known	chr5	+	4401	22	FSM	ENSG00000145868.17	ENST00000340253.10	4401	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_15	15.5061248962161	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	2	True	NA	21	True	AATAAA	-18	NA	148383957	148442836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427948_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_78031.known	chr5	+	3680	21	FSM	ENSG00000145868.17	ENST00000296701.10	3680	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	22.8111266709911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTTTCTCTTGCCTT	NA	False	NA	12	True	AATAAA	-9	NA	148383934	148442827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_78034.nic	chr5	+	1396	9	ISM	ENSG00000145868.17	ENST00000340253.10	4401	22	-2	31915	-2	53	5prime_fragment	FALSE	canonical	3	67	junction_7	12.3636311413759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGATTTTTTTTTCC	0	True	NA	6	True	AATAAA	-16	NA	148383955	148410921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634
transcript_78036.known	chr5	+	4020	4	FSM	ENSG00000164284.15	ENST00000329271.8	4020	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11.6141675934562	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	-11	True	NA	17	True	AATAAA	-22	NA	149345498	149354583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_149345617_149348271_149348426_149349653_149349736_149350917
transcript_78038.known	chr5	-	2570	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	611.834650865738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTCTTTCATTTTTTT	102	False	NA	NA	False	AAAAAG	-24	NA	149551404	149495784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_78039.known	chr5	-	5444	11	FSM	ENSG00000113712.19	ENST00000261798.10	5444	11	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	538.718006010566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-7	True	NA	-64	True	AATAAA	-16	NA	149551439	149492981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_78044.known	chr5	-	4902	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	457.11505426917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGCTAGGAGCAGTG	109	False	NA	NA	False	NA	NA	NA	149551397	149493361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_78045.known	chr5	-	5360	10	FSM	ENSG00000113712.19	ENST00000377843.8	5360	10	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	297.808663406557	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-7	True	NA	-64	True	AATAAA	-16	NA	149551439	149492981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_7805.known	chr1	-	934	7	FSM	ENSG00000160818.17	ENST00000415314.6	934	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	180.575930474321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGCACCATGAAGAGG	NA	False	NA	17	True	AAAAAG	-3	NA	156601490	156595444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_78054.known	chr5	-	2413	11	FSM	ENSG00000113712.19	ENST00000661952.1	2413	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	699.406205291317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTATTAAATAAAAATCTC	7	True	NA	41	True	TTTAAA	-24	NA	149551471	149495939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149515668_149515727_149517793_149517878_149520289_149520389_149550074_149550182_149550841
transcript_78056.known	chr5	+	10569	12	FSM	ENSG00000155846.17	ENST00000309241.10	10569	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	5.90979016841637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCCCATGTGTGTTTT	6	True	NA	17	True	ATTAAA	-19	NA	149730309	149855022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759_149845915_149847457
transcript_78057.known	chr5	+	4803	11	FSM	ENSG00000155846.17	ENST00000394320.7	4803	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	6.19758017293847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCAATG	-3	True	NA	NA	False	NA	NA	NA	149730300	149847704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
transcript_78059.known	chr5	+	5567	21	FSM	ENSG00000113716.13	ENST00000613459.4	5567	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	41.7447900940944	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGAGTCAATTCCGTGC	NA	False	NA	28	True	AATAAA	-28	NA	150000045	150053142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150000056_150000453_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_78060.known	chr5	+	8054	3	FSM	ENSG00000155850.9	ENST00000286298.5	8054	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTCTGTATTTAAATT	11	True	NA	NA	False	AATAAA	-18	NA	149960757	149987400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_149960980_149977627_149978352_149980292
transcript_78062.known	chr5	-	3493	2	FSM	ENSG00000164296.7	ENST00000296736.4	3493	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTACATATTTTAAAT	-8	True	NA	NA	False	AATAAA	-25	NA	150000654	149993117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_149996430_150000473
transcript_78064.known	chr5	+	4832	26	FSM	ENSG00000070814.22	ENST00000323668.11	4832	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	287.527250882416	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCACATGTTTCTTG	-31	True	NA	39	True	AATAAA	-34	NA	150357671	150400308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_78065.known	chr5	+	5026	27	FSM	ENSG00000070814.22	ENST00000643257.2	5026	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	224.725463674388	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCCCAGTGCATCTGG	-6	True	NA	24	True	AATAAA	-19	NA	150357696	150400293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_78072.known	chr5	+	4194	23	FSM	ENSG00000070814.22	ENST00000650162.1	4194	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	297.888616934541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAGAAGAAAAAGAAGAAAA	NA	False	NA	NA	False	AAAAAG	-30	NA	150357628	150398429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353
transcript_78078.known	chr5	-	3092	9	FSM	ENSG00000019582.17	ENST00000009530.13	1653	9	159	-1598	0	1596	multi-exon	FALSE	canonical	2	21	junction_2	178.858708202872	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTCCTGTGTTGG	2	True	NA	NA	False	AATACA	-18	NA	150412751	150400040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_78079.known	chr5	-	1270	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	41.0763351106504	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTAGAATAAAAGGT	3	True	NA	-38	True	NA	NA	NA	150412750	150401669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_78095.known	chr5	-	712	5	FSM	ENSG00000164587.13	ENST00000312037.6	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	2915	junction_4	10676.4559516489	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-5	True	NA	-15	True	AATAAA	-16	NA	150449691	150444237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449485
transcript_78096.known	chr5	-	2314	5	FSM	ENSG00000164587.13	ENST00000401695.8	2314	5	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_4	11381.0263898956	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	60	False	NA	NA	False	AATAAA	-41	NA	150449696	150442634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449491
transcript_78098.known	chr5	-	2146	5	FSM	ENSG00000164587.13	ENST00000407193.7	2146	5	0	0	0	0	multi-exon	FALSE	canonical	3	22852	junction_4	3219.53416661479	3800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	0	True	NA	NA	False	AATAAA	-41	NA	150449739	150442634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449702
transcript_781.known	chr1	-	872	9	FSM	ENSG00000116670.15	ENST00000376667.7	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_8	702.565966653666	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTCAGACTTTGGGG	15	True	NA	NA	False	CATAAA	-37	NA	11691609	11674747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_7810.known	chr1	+	1111	6	FSM	ENSG00000163382.13	ENST00000368235.8	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_3	73.963774917185	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTGTCCTTTA	-6	True	NA	28	True	AATGAA	-21	NA	156591775	156594299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
transcript_78109.known	chr5	-	3119	3	FSM	ENSG00000164587.13	ENST00000519690.1	3119	3	0	0	0	0	multi-exon	FALSE	canonical	3	26120	junction_1	2388.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	29	False	NA	-15	True	AATAAA	-16	NA	150449727	150444237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150444354_150445608_150445686_150446801
transcript_78114.nnic	chr5	-	1329	5	NNC	ENSG00000250309.2	novel	425	2	NA	NA	-110	5074	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	15.7539677541881	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672500	150665583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_150666032_150668116_150668273_150670149_150670210_150670527_150670808_150672115
transcript_78120.nnic	chr5	-	879	3	NNC	ENSG00000250309.2	novel	425	2	NA	NA	-96	5074	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_2	1.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672486	150665583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_150666032_150670149_150670210_150672115
transcript_78121.known	chr5	+	605	2	FSM	ENSG00000164591.14	ENST00000520112.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGTAGCCCTAGCCTG	454	False	NA	NA	False	NA	NA	NA	150672056	150676865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150672503_150676706
transcript_78122.known	chr5	-	425	2	FSM	ENSG00000250309.2	ENST00000511626.2	425	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTGGCTTACTCACC	NA	False	NA	NA	False	NA	NA	NA	150672390	150670657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150670808_150672115
transcript_78126.known	chr5	-	2299	11	FSM	ENSG00000086589.12	ENST00000199814.9	2299	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	33.3772377526961	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTCATGGGTTTATT	-21	True	NA	-9	True	ATTAAA	-17	NA	150701062	150690791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_78136.known	chr5	-	4116	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_10	20.9775011752009	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCACTCATCACCT	-9	True	NA	NA	False	AATATA	-19	NA	150759017	150708439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
transcript_78140.known	chr5	+	1521	2	FSM	ENSG00000256235.3	ENST00000526627.2	1521	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGAGGTCTTTCTTT	2	True	NA	23	True	AATAAA	-14	NA	150778756	150796734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_150778973_150795429
transcript_78143.known	chr5	-	3323	7	FSM	ENSG00000145908.13	ENST00000446148.6	3323	7	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_1	52.7088438710452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-5	True	NA	-14	True	CATAAA	-28	NA	150904983	150894391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903183_150903328_150903384_150903863_150903978_150904703
transcript_78144.known	chr5	-	3256	6	FSM	ENSG00000145908.13	ENST00000394226.2	3256	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	46.1415214313529	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	0	True	NA	-21	True	CATAAA	-21	NA	150904978	150894398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150896970_150898057_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_78148.known	chr5	-	3226	5	FSM	ENSG00000145908.13	ENST00000418587.6	3226	5	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_1	58.5619330282053	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-5	True	NA	-14	True	CATAAA	-28	NA	150904983	150894391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903863_150903978_150904703
transcript_78149.known	chr5	-	4155	5	FSM	ENSG00000145908.13	ENST00000427179.5	4155	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	20.8626460450251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	189	False	NA	-21	True	CATAAA	-21	NA	150904789	150894398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_78154.known	chr5	+	1757	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-153	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	237.583332748743	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTACTGTGTGTGGTGCT	NA	False	NA	20	True	AGTAAA	-20	NA	151020437	151028992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151020742_151025339_151025469_151025471_151025494_151026899_151027018_151027431_151027532_151027908
transcript_78155.known	chr5	+	1478	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	237.583332748743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGCCTACTGTGTGTG	-2	True	NA	15	True	AGTAAA	-15	NA	151020588	151028987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908_151028777_151028902
transcript_78158.known	chr5	+	1603	5	FSM	ENSG00000211445.13	ENST00000388825.9	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_4	58.7468084239476	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCCTACTGTGTGTGG	0	True	NA	16	True	AGTAAA	-16	NA	151020590	151028988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908
transcript_78160.known	chr5	+	612	4	FSM	ENSG00000211445.13	ENST00000517973.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	242.162938718725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACTTTGTTCAGGAAG	15	False	NA	NA	False	NA	NA	NA	151020605	151028166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151020742_151026899_151027018_151027431_151027532_151027908
transcript_78161.known	chr5	-	2870	18	FSM	ENSG00000145901.16	ENST00000521591.6	2870	18	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_11	16.8050083159239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	-6	True	NA	-8	True	CATAAA	-21	NA	151081034	151029944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_78162.known	chr5	-	2935	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	31.987346114029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGACTCATGTTCA	6594	False	NA	-10	True	CATAAA	-19	NA	151081084	151029946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_78163.known	chr5	-	2889	26	FSM	ENSG00000197043.14	ENST00000354546.10	2889	26	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	36.5208105057924	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTGAGGGCCTCTGT	-12	True	NA	NA	False	AATAAA	-27	NA	151157779	151100705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
transcript_78165.known	chr5	-	899	2	FSM	ENSG00000197043.14	ENST00000519610.1	899	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGCTCCAGCATCTATA	6	True	NA	NA	False	ACTAAA	-29	NA	151157761	151154884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151155702_151157679
transcript_78167.nnic	chr5	+	1896	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-61	-1194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.2179411885173	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTGCCTTGGCTGCAT	-8	True	NA	29	True	AATAAA	-23	NA	151253123	151269246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268098_151268671
transcript_78169.nnic	chr5	+	2044	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-3	2325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.2179411885173	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCAGAAGTTTTCATTT	-3	True	NA	9	True	AATAAA	-15	NA	151253181	151272765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268174_151272060
transcript_7817.known	chr1	+	1012	5	FSM	ENSG00000163382.13	ENST00000368233.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_3	66.6352009076284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGATGGGACGTGGAGA	-4	True	NA	NA	False	NA	NA	NA	156591777	156593876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407
transcript_78170.nnic	chr5	+	1920	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-3	-1202	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	68.2179411885173	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	-3	True	NA	21	True	AATAAA	-15	NA	151253181	151269238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268182_151268665
transcript_78171.known	chr5	+	3603	4	FSM	ENSG00000196743.9	ENST00000357164.4	3603	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	9.7410927974683	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAGTGTTCTTACTATA	0	True	NA	45	True	AATAGA	-5	NA	151253184	151270440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295
transcript_78172.nic	chr5	+	1287	7	ISM	ENSG00000123643.13	ENST00000521925.5	1621	10	-31	11493	-7	-2693	5prime_fragment	FALSE	canonical	3	28	junction_3	4.88762609953839	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-13	True	NA	NA	False	NA	NA	NA	151447595	151468266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706
transcript_78176.known	chr5	+	10011	13	FSM	ENSG00000145907.16	ENST00000678925.1	10011	13	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_12	852.983326657418	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	NA	False	NA	NA	False	AATAAA	-28	NA	151771905	151812785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884_151804142_151804405
transcript_78177.known	chr5	+	1532	13	FSM	ENSG00000145907.16	ENST00000677105.1	1532	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1170.98927787102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCATGGATCTTCATGC	0	True	NA	-96	True	GGGGCT	-17	NA	151771953	151804091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786602_151786716_151787764_151787795_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_78179.known	chr5	+	1794	13	FSM	ENSG00000145907.16	ENST00000678101.1	1794	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1117.30572509646	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGACTGGATTTTTT	0	True	NA	NA	False	AAAAAG	-25	NA	151771953	151804371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151772656_151772669_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_78180.known	chr5	+	10474	12	FSM	ENSG00000145907.16	ENST00000678904.1	10474	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1150.95737368204	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	0	True	NA	NA	False	AATAAA	-28	NA	151771953	151812785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786571_151786716_151787764_151787795_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800347_151800759_151800870_151803884
transcript_78184.known	chr5	+	10622	12	FSM	ENSG00000145907.16	ENST00000678964.1	10622	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	895.584725193546	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	NA	False	NA	NA	False	AATAAA	-28	NA	151771905	151812785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803537
transcript_78186.known	chr5	+	10227	12	FSM	ENSG00000145907.16	ENST00000356245.8	10227	12	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	290.566957902638	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	0	True	NA	NA	False	AATAAA	-28	NA	151771953	151812785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_78191.known	chr5	+	1768	12	FSM	ENSG00000145907.16	ENST00000676827.1	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	846.868602412479	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTCCTTGCTTAC	14	False	NA	NA	False	TTTAAA	-15	NA	151771938	151804346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_151772033_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_782.nnic	chr1	-	1025	9	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	-183	0	at_least_one_novel_splicesite	FALSE	canonical	3	973	junction_8	695.152040473881	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-27	True	NA	-20	True	AATAAA	-23	NA	11691833	11674479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691751
transcript_7820.known	chr1	+	6317	5	FSM	ENSG00000163382.13	ENST00000680529.1	6317	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_2	73.6117347981964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACTTGAGCCCAGGAG	-6	True	NA	NA	False	NA	NA	NA	156591775	156599350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156591987_156592100_156592476_156592556_156592671_156593407_156593556_156593881
transcript_78207.known	chr5	-	471	4	FSM	ENSG00000177556.12	ENST00000313115.11	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_3	80.7589004382799	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	7738	False	151758644	-9	True	AATAAA	-21	NA	151758631	151742821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151758545
transcript_78209.nnic	chr5	-	409	3	NIC	ENSG00000177556.12	novel	749	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_2	444.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-1	True	NA	-9	True	AATAAA	-21	NA	151758645	151742821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_151742960_151746278_151746450_151758545
transcript_7821.known	chr1	+	529	2	FSM	ENSG00000163382.13	ENST00000488840.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	1750	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCAGAACTGTGGATT	704	False	NA	-25	True	AATAAA	-15	NA	156593274	156594129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156593556_156593881
transcript_78214.known	chr5	-	4414	14	FSM	ENSG00000055147.19	ENST00000351797.9	4414	14	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_13	10.0525247792716	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGATATTTCACAAA	-15	True	NA	NA	False	AATAAA	-25	NA	154038910	153990147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
transcript_7822.nic	chr1	+	1171	5	ISM	ENSG00000132692.19	ENST00000329117.10	3297	14	14730	0	118	0	3prime_fragment	TRUE	canonical	3	21	junction_3	3.53553390593274	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	NA	False	NA	8	True	AATAAA	-22	NA	156656846	156659528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
transcript_78220.known	chr5	+	5037	3	FSM	ENSG00000037749.13	ENST00000522782.6	5037	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	23	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	-13	True	NA	29	True	ATTAAA	-31	NA	154038966	154057450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154039012_154049556_154050018_154052919
transcript_78225.nic	chr5	+	2854	3	NIC	ENSG00000037749.13	novel	2891	3	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	57.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCCTGGCTGAGATC	10	False	NA	2	True	AATAAA	-15	NA	154039023	154055033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_154039303_154049556_154050018_154052919
transcript_78226.known	chr5	+	2891	3	FSM	ENSG00000037749.13	ENST00000322602.9	2891	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	64	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCCTGGCTGAGATC	13	True	NA	2	True	AATAAA	-15	NA	154038992	154055033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154039309_154049556_154050018_154052919
transcript_78228.known	chr5	+	6185	4	FSM	ENSG00000164576.12	ENST00000297109.11	6185	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	36.4508801905615	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCCCTTTGAA	-9	True	NA	18	True	AATAAA	-21	NA	154445996	154461053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154446806_154451090_154451214_154453401_154453501_154455899
transcript_7823.known	chr1	-	783	5	FSM	ENSG00000143320.9	ENST00000368221.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	848.307137774992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGCCCAGAGCAGGGT	-1	True	NA	-116	True	NA	NA	NA	156705747	156699755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705504_156705708
transcript_78230.known	chr5	-	2947	9	FSM	ENSG00000170271.11	ENST00000326080.10	2947	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	2.72717802865893	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	7	True	NA	-1	True	AATAAA	-15	NA	154850603	154818491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_154820473_154821259_154821427_154822471_154822578_154823386_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
transcript_78232.known	chr5	+	2446	7	FSM	ENSG00000155508.14	ENST00000285896.11	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	40.8224475285623	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	-22	True	NA	14	True	AATAAA	-23	NA	154858626	154876792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_78233.known	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	158.436895955456	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	5	True	NA	14	True	AATAAA	-23	NA	154858516	154876792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_78237.known	chr5	+	862	5	FSM	ENSG00000155508.14	ENST00000523698.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	221.554169448467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGCCTGATCCCAGAG	14	True	NA	NA	False	NA	NA	NA	154858248	154875456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154858526_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_78238.known	chr5	-	5404	28	FSM	ENSG00000082516.9	ENST00000285873.8	5404	28	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_17	27.2842578609593	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTCCTAATTTTGCA	-8	True	NA	-13	True	ATTAAA	-26	NA	154938211	154887410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_154888378_154889320_154889418_154891240_154891743_154892386_154892550_154896091_154896344_154898439_154898651_154899190_154899311_154901338_154901487_154902538_154902677_154903079_154903176_154904506_154904630_154905362_154905477_154907590_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_78241.known	chr5	+	784	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_1	119.290234302729	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	6	True	NA	9	True	AATAAA	-13	NA	154941094	154966966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_78242.known	chr5	-	2071	2	FSM	ENSG00000155868.8	ENST00000286317.6	2071	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGAGGGTTCTCTGGCT	-5	True	NA	NA	False	AATAAA	-39	NA	157142865	157137423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157139449_157142819
transcript_78243.known	chr5	-	1382	2	FSM	ENSG00000155868.8	ENST00000420343.1	1382	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGCAAAGTTTTCGT	85	False	NA	-25	True	AGTAAA	-18	NA	157142775	157138441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157139449_157142400
transcript_78246.known	chr5	+	6452	31	FSM	ENSG00000055163.20	ENST00000620254.5	6452	31	0	0	0	0	multi-exon	TRUE	canonical	2	152	junction_18	28.4222330813983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGGTCTTGATTCCT	11	True	NA	NA	False	ATTAAA	-25	NA	157266122	157395594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_78248.known	chr5	+	1294	8	FSM	ENSG00000055163.20	ENST00000622696.4	1294	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	27.4174084427082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGGGAAGCAGGTGG	24	True	NA	NA	False	AATAAA	-21	NA	157266135	157304782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237
transcript_78249.known	chr5	+	580	6	FSM	ENSG00000055163.20	ENST00000522637.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	90.1829252131466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTGGCTGACATT	16	True	NA	NA	False	NA	NA	NA	157266127	157304274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157266196_157285338_157285479_157287018_157287075_157300714_157300897_157302793_157302891_157304237
transcript_7825.known	chr1	-	1033	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_4	824.539265286984	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAACCTGTCTC	-19	True	NA	22	True	ATTAAA	-8	NA	156705816	156699617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
transcript_78250.known	chr5	+	2885	6	FSM	ENSG00000113272.14	ENST00000231198.12	2885	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	13.8650640099496	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTTTTCATTTATTT	-3	True	NA	5	True	AATAAA	-17	NA	157731419	157741449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_157731632_157732867_157733045_157734575_157734746_157735845_157735935_157737886_157737995_157739320
transcript_78254.known	chr5	-	3952	12	FSM	ENSG00000113282.14	ENST00000411809.7	3952	12	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	163.76484854765	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTTAATTCTTT	-7	True	NA	NA	False	AGTAAA	-13	NA	157859145	157785746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157787993_157789362_157789514_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_78255.known	chr5	-	2346	12	FSM	ENSG00000113282.14	ENST00000523908.5	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	131.640193314458	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGACCATTGAAAGC	-5	True	NA	NA	False	NA	NA	NA	157859143	157787404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_78256.known	chr5	-	3987	12	FSM	ENSG00000113282.14	ENST00000523094.5	3987	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	262.402913962857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTAATTCTTTCTCT	-7	True	NA	NA	False	AGTAAA	-17	NA	157859145	157785742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858952
transcript_78262.known	chr5	-	3344	12	FSM	ENSG00000113282.14	ENST00000530742.5	3344	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	262.65629742786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTGCTTTTTCTTT	5	True	NA	-12	True	ATTAAA	-18	NA	157859133	157786286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157859039
transcript_78269.nic	chr5	-	681	5	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-50	25717	-48	-21364	5prime_fragment	FALSE	canonical	3	866	junction_3	45.4113146693641	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAACAAAGACAAGTATG	NA	False	NA	NA	False	AAGAAA	-6	NA	157859193	157813121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_78272.known	chr5	-	3478	11	FSM	ENSG00000145860.12	ENST00000519865.5	3478	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	55.4703524416422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTCTTGTGGT	3	True	NA	-2	True	AATAAA	-18	NA	159208073	159157408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159207887
transcript_78273.known	chr5	-	3615	11	FSM	ENSG00000145860.12	ENST00000424310.7	3615	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	24.503877244224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTCTTGTGGT	-7	True	NA	-2	True	AATAAA	-18	NA	159209553	159157408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159209230
transcript_78276.known	chr5	-	1940	2	FSM	ENSG00000145860.12	ENST00000518284.1	1940	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGTTTTGTTCTTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	159161580	159157410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_159159036_159161265
transcript_78277.known	chr5	+	2179	11	FSM	ENSG00000164332.8	ENST00000296786.8	2179	11	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_10	23.0228147714392	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTATCTGTTCTATA	-15	True	NA	16	True	AATAAA	-16	NA	159263289	159286036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_159263361_159268869_159269070_159269907_159270000_159270359_159270446_159270527_159270644_159272022_159272122_159274584_159274623_159275147_159275247_159278237_159278355_159283211_159283340_159284903
transcript_78283.known	chr5	+	1441	8	FSM	ENSG00000113312.12	ENST00000231238.10	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	64.7598389026245	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGTTAGGTTGTGAA	-7	True	NA	16	True	AATAAA	-16	NA	160009138	160065543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_78285.known	chr5	+	2208	7	FSM	ENSG00000113312.12	ENST00000682151.1	2208	7	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	68.0343050722697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	NA	False	NA	NA	NA	160009124	160052548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128
transcript_78286.known	chr5	+	1366	7	FSM	ENSG00000113312.12	ENST00000684137.1	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	271.377146339841	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	-19	True	NA	-16	True	NA	NA	NA	160009126	160065511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160064931
transcript_78287.known	chr5	+	1283	7	FSM	ENSG00000113312.12	ENST00000684018.1	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	256.35939399384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCTGTGCTTAGGTC	-14	True	NA	0	True	NA	NA	NA	160009131	160065527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160051128_160051184_160064931
transcript_78290.known	chr5	+	901	6	FSM	ENSG00000113312.12	ENST00000683219.1	901	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	281.524137508669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTCCCTCTTTTATG	-14	True	NA	NA	False	AAGAAA	-24	NA	160009131	160065200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160064931
transcript_78294.known	chr5	+	1485	8	FSM	ENSG00000113312.12	ENST00000682719.1	1485	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	264.21242226972	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	NA	False	NA	10	True	AATAAA	-10	NA	160009112	160065537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160009194_160010475_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_78295.known	chr5	+	756	7	FSM	ENSG00000170231.16	ENST00000393980.8	756	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	13.7325647034097	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTCTTTTCT	NA	False	NA	23	True	AATAAA	-35	NA	160187366	160238735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160187455_160199048_160199158_160213735_160213820_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_78296.known	chr5	+	440	3	FSM	ENSG00000170231.16	ENST00000521362.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	-11	True	NA	4	True	AATAAA	-16	NA	160232034	160238716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160232274_160234819_160234910_160238605
transcript_78297.known	chr5	+	496	4	FSM	ENSG00000170231.16	ENST00000402432.4	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	1	True	NA	4	True	AATAAA	-16	NA	160229505	160238716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160229625_160232097_160232274_160234819_160234910_160238605
transcript_78298.known	chr5	-	2385	3	FSM	ENSG00000145861.9	ENST00000393975.4	2385	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	160370641	160347779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_160349782_160354767_160355021_160370511
transcript_78299.known	chr5	-	2808	2	FSM	ENSG00000221886.4	ENST00000408953.4	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTGTCATCTTTAA	-10	True	NA	-2	True	AATAAA	-17	NA	160400054	160393147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_160395540_160399638
transcript_78306.known	chr5	-	3480	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_8	28.1334913107729	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGTAGCATTATTTC	-8	True	NA	-1	True	CATAAA	-20	NA	160419081	160401640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_78307.nic	chr5	-	2395	16	NIC	ENSG00000164609.10	novel	3480	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_15	69.8648218585959	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAAGTTCACTCCTTT	-8	True	NA	-13	True	AATAAA	-15	NA	160419081	160403152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160418595
transcript_7831.known	chr1	-	974	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_3	191.362367135118	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	0	True	NA	34	True	AATAAA	-2	NA	156705583	156699605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
transcript_78312.nic	chr5	-	2016	15	NIC	ENSG00000164609.10	novel	3480	16	NA	NA	0	-1354	intron_retention	FALSE	canonical	2	8	junction_14	72.3152466493698	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCATCGAAAGAGCA	-8	True	NA	NA	False	AAAAAG	-6	NA	160419081	160404506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160418595
transcript_78313.nic	chr5	-	1656	15	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-67	2866	-67	-1354	5prime_fragment	FALSE	canonical	3	215	junction_7	28.7740139283872	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCATCGAAAGAGCA	3699	False	NA	NA	False	AAAAAG	-6	NA	160419148	160404506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_78315.nic	chr5	-	1550	14	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-11	3168	-11	1540	5prime_fragment	FALSE	canonical	3	215	junction_6	28.1462789325957	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGATAATCATTTGT	3755	False	NA	NA	False	NA	NA	NA	160419092	160404808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_78318.known	chr5	+	715	6	FSM	ENSG00000164611.13	ENST00000352433.10	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	2239	junction_1	496.637332467063	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	-5	True	NA	28	True	AATAAA	-16	NA	160421854	160428739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_78320.known	chr5	+	895	6	FSM	ENSG00000164611.13	ENST00000520452.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	1304.92690983059	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	25	False	NA	-7	True	TTTAAA	-23	NA	160421903	160428704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160422156_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_78321.known	chr5	+	670	6	FSM	ENSG00000164611.13	ENST00000519287.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	1315.86965919881	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	-8	True	NA	28	True	AATAAA	-16	NA	160422206	160428739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160422237_160422339_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_78329.known	chr5	+	1070	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	2777	junction_4	312.198154222603	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	31	False	NA	28	True	AATAAA	-16	NA	160421909	160428739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_78330.known	chr5	+	4238	10	FSM	ENSG00000022355.18	ENST00000393943.10	4238	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	9.6083811151682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATGTTTTGAAAGGAC	-3	True	NA	25	True	AATAAA	-41	NA	161848119	161899971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_161848423_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665_161895869_161897110
transcript_78334.known	chr5	+	4087	10	FSM	ENSG00000022355.18	ENST00000437025.6	4087	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.9251098251394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATACTTGACTCTCTTT	96	False	NA	8	True	AATAAA	-24	NA	161848443	161899954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_161848613_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665_161895869_161897110
transcript_78335.known	chr5	+	4878	9	FSM	ENSG00000022355.18	ENST00000635916.2	4878	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.7512499583361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAGTCCAATGAAGAT	384	False	NA	NA	False	NA	NA	NA	161847662	161898086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_161848423_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161881731_161882702_161890897_161891051_161895665
transcript_78339.known	chr5	+	11548	9	FSM	ENSG00000113327.17	ENST00000639111.2	11548	9	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	2.44629822384762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTTTAATGTCTACA	-11	True	NA	NA	False	AATAAA	-20	NA	162067464	162162977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_162068107_162093827_162093980_162095494_162095563_162097637_162097859_162101234_162101318_162103888_162104027_162142163_162142317_162149107_162149314_162153092
transcript_78340.known	chr5	+	2849	4	FSM	ENSG00000113327.17	ENST00000640500.1	2849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.71404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAATCCATGGTGGCAT	NA	False	NA	-3	True	AATAAA	-9	NA	162128321	162155515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_162128389_162142163_162142317_162149107_162149314_162153092
transcript_78342.nnic	chr5	-	609	4	NNC	ENSG00000254186.3	novel	2798	15	NA	NA	-10	-44559	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTTGGTTTGTTTTCAT	-8	True	NA	-3	True	AATAAA	-16	NA	163437336	163301409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_163301654_163425802_163425921_163428940_163429034_163437182
transcript_78349.known	chr5	+	2366	8	FSM	ENSG00000113328.19	ENST00000393929.5	2366	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	1435.17542126247	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTGCTGGGTGGCTT	NA	False	NA	14	True	AATAAA	-14	NA	163437570	163445014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163437665_163437764_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_78359.known	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	FALSE	canonical	3	3745	junction_3	194.332189819391	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	-5	True	NA	16	True	AATAAA	-16	NA	163437594	163445016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_7836.nic	chr1	+	1799	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	20	0	intron_retention	FALSE	canonical	3	17	junction_6	13.1676784249176	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	10	True	NA	25	True	ATTAAA	-14	NA	156728488	156736949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
transcript_78364.known	chr5	+	1071	6	FSM	ENSG00000113328.19	ENST00000511683.6	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	1538.53501747604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCTACTTAAATTTTAA	166	False	NA	NA	False	NA	NA	NA	163437765	163444078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163437805_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_78369.known	chr5	-	7967	4	FSM	ENSG00000170584.11	ENST00000302764.9	7967	4	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_3	58.0861429258304	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTGAGTCCAATTAA	10	True	NA	NA	False	ATTAAA	-15	NA	163460102	163446525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_163454051_163456928_163457081_163457561_163457611_163459861
transcript_7837.known	chr1	+	2271	8	FSM	ENSG00000143303.12	ENST00000368216.9	2271	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	12.0220885142681	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTAGGTAGATAAAAG	-10	True	NA	36	True	ATTAAA	-25	NA	156728468	156736960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_78370.nic	chr5	-	2070	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-286	347	combination_of_known_junctions	FALSE	canonical	3	126	junction_3	527.977482684842	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTACCCCTTTGTCTAA	NA	False	NA	-6	True	AATAAA	-17	NA	163460388	163453575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163458994
transcript_78371.nic	chr5	-	1578	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-126	347	combination_of_known_junctions	FALSE	canonical	3	96	junction_3	542.113354280162	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTACCCCTTTGTCTAA	NA	False	NA	-6	True	AATAAA	-17	NA	163460228	163453575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163459326
transcript_78375.known	chr5	-	662	3	FSM	ENSG00000170584.11	ENST00000519395.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	569.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAGCTTACATTAGAG	622	False	NA	NA	False	NA	NA	NA	163459490	163456963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_163457081_163457561_163457611_163458994
transcript_78378.known	chr5	+	2988	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	106.557488098661	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	7	True	NA	13	True	AATAAA	-26	NA	163460656	163491941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_7838.known	chr1	+	1802	7	FSM	ENSG00000143303.12	ENST00000368218.8	1802	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	14.4193157489066	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	NA	False	NA	25	True	ATTAAA	-14	NA	156728441	156736949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
transcript_78381.known	chr5	+	2872	17	FSM	ENSG00000072571.20	ENST00000353866.7	2872	17	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_3	69.4883083691062	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGATAATGCTCACTT	NA	False	NA	NA	False	AAAACA	-27	NA	163460365	163491579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_78399.known	chr5	+	2226	7	FSM	ENSG00000038274.17	ENST00000280969.9	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	116.405421790491	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACTTACCACCCCATC	0	True	NA	19	True	AATAAA	-30	NA	163503113	163519336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163503425_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_78404.known	chr5	+	2064	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	110.554159678513	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	8	True	NA	37	True	AATAAA	-38	NA	163505618	163519354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_78418.known	chr5	+	3409	5	FSM	ENSG00000038274.17	ENST00000518095.5	3409	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	124.880943302011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGAATGTTAACTTAC	3	True	NA	10	True	AATAAA	-21	NA	163505613	163519327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517
transcript_78423.nnic	chr5	-	1924	6	Genic_Genomic	ENSG00000254252.1	novel	745	1	NA	NA	-44937	380	multi-exon	FALSE	non_canonical	0	0	junction_1	11.2356575241505	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTCATTGTTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	166074248	166028186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr5_-_166029320_166030383_166030537_166036744_166036863_166056725_166056901_166060136_166060229_166073995
transcript_78426.nnic	chr5	-	1592	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-51	465	multi-exon	FALSE	canonical	3	66	junction_2	21.6491916708223	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303423	167286854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
transcript_78428.nnic	chr5	-	1559	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	0	465	multi-exon	FALSE	canonical	1	1	junction_2	45.0860288781347	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303372	167286854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167291941_167292048_167294250_167294401_167297462_167297551_167303122
transcript_78429.nnic	chr5	-	1134	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-51	7	multi-exon	FALSE	canonical	3	66	junction_2	21.6491916708223	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303423	167287312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
transcript_78430.nnic	chr5	-	1147	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-51	7	multi-exon	FALSE	canonical	2	2	junction_2	44.6843093266529	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303423	167287312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167291941_167292043_167294250_167294401_167297462_167297551_167303122
transcript_78432.nnic	chr5	-	1391	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	0	465	multi-exon	FALSE	canonical	3	8	junction_2	48.3942145302514	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303372	167286854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167291941_167292030_167297462_167297551_167303122
transcript_78433.nnic	chr5	-	1504	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-51	465	multi-exon	FALSE	canonical	3	21	junction_1	42.8330090778907	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303423	167286854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167294250_167294401_167297462_167297551_167303122
transcript_78435.nnic	chr5	-	986	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	2	0	multi-exon	FALSE	canonical	3	21	junction_1	42.8330090778907	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATTGTTATTAC	NA	False	NA	NA	False	AATAAA	-21	NA	167303370	167287319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167294250_167294401_167297462_167297551_167303122
transcript_78438.nnic	chr5	-	1364	3	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	0	2859	multi-exon	FALSE	canonical	3	85	junction_1	20	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTAGCCGGACATGG	NA	False	NA	NA	False	AATACA	-16	NA	167303372	167293374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167294401_167297462_167297551_167303122
transcript_78440.nnic	chr5	-	1130	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-47	7	multi-exon	FALSE	canonical	3	66	junction_2	21.6491916708223	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303419	167287312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
transcript_78441.nnic	chr5	-	980	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-47	7	multi-exon	FALSE	canonical	3	8	junction_2	48.3942145302514	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303419	167287312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr5_-_167287820_167291941_167292030_167297462_167297551_167303122
transcript_78442.nnic	chr5	-	1042	4	NNC	ENSG00000254297.1	novel	648	3	NA	NA	0	292	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	14.8548533034381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGGTGCACACTCAGT	NA	False	NA	NA	False	ATTAAA	-27	NA	167303372	167295941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_167296544_167297462_167297551_167301073_167301176_167303122
transcript_78444.known	chr5	-	648	3	FSM	ENSG00000254297.1	ENST00000523497.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	42	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGGGTGAACACAAAGA	NA	False	NA	NA	False	NA	NA	NA	167303372	167296233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_167296544_167297462_167297551_167303122
transcript_78448.known	chr5	-	590	3	FSM	ENSG00000253978.2	ENST00000655017.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGACTTCCTAGTGCTT	NA	False	NA	-6	True	GATAAA	-21	NA	168269415	168229583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_168229861_168230885_168231057_168269273
transcript_78449.known	chr5	+	2077	10	FSM	ENSG00000113645.15	ENST00000524038.5	2077	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	24.3619821204989	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCTTGCTCTCTTTT	NA	False	NA	15	True	AATAAA	-19	NA	168430158	168469759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467842_168467965_168468950
transcript_78454.known	chr5	+	2122	15	FSM	ENSG00000113643.9	ENST00000231572.8	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_3	76.4230972672422	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTGGTTCTTTAACA	0	True	NA	19	True	AGTAAA	-19	NA	168486470	168519301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_78473.known	chr5	+	678	5	FSM	ENSG00000113643.9	ENST00000521939.5	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_3	103.483090406114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGAGGCTGAAGCAGGA	15	True	NA	NA	False	NA	NA	NA	168486485	168494736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549
transcript_78474.known	chr5	+	757	3	FSM	ENSG00000113643.9	ENST00000524082.5	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_2	47	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCAATTAAATATTTGAT	NA	False	NA	NA	False	ATTAAA	-22	NA	168486450	168493187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658
transcript_78475.known	chr5	+	1990	14	FSM	ENSG00000113643.9	ENST00000520013.5	1990	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	243.805140933415	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAATGTGGTTCTTTA	20	False	NA	16	True	AGTAAA	-16	NA	168486490	168519298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_78476.known	chr5	-	10274	7	FSM	ENSG00000120137.7	ENST00000239231.7	10274	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	18.2847842025366	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTTTTTATTATTT	-11	True	NA	-3	True	AATAAA	-20	NA	168579368	168548494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
transcript_78485.known	chr5	+	2529	12	FSM	ENSG00000040275.17	ENST00000265295.9	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_11	38.4290695753846	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	9	True	NA	26	True	AATAAA	-23	NA	169583772	169604778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_78487.nic	chr5	+	2633	12	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	108.433321096271	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	NA	False	NA	26	True	AATAAA	-23	NA	169583644	169604778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596584_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_7849.nic	chr1	-	2721	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	115.566238822398	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	-11	True	NA	-29	True	GATAAA	-17	NA	156728441	156721894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_78490.known	chr5	+	2321	2	FSM	ENSG00000168269.10	ENST00000306268.8	2321	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCGTGGGACTTCCTTAT	0	True	NA	NA	False	ATTAAA	-23	NA	170105896	170109734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170106532_170108048
transcript_78491.known	chr5	-	4232	21	FSM	ENSG00000043462.13	ENST00000046794.10	4232	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.217944947177034	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGTTTACATTATTTT	12	True	NA	NA	False	ATTAAA	-20	NA	170297777	170246232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_170248820_170250729_170250886_170252433_170252512_170253118_170253214_170256525_170256576_170258036_170258167_170258865_170258879_170261106_170261138_170262634_170262743_170262841_170262862_170262966_170262993_170266807_170266892_170267008_170267076_170268384_170268483_170270718_170270918_170274300_170274339_170275319_170275352_170275794_170275861_170287969_170288017_170293309_170293373_170297533
transcript_78493.known	chr5	-	4742	4	FSM	ENSG00000145936.9	ENST00000274629.9	4742	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTAGTGCTTCCATCAT	0	True	NA	NA	False	AATAAA	-16	NA	170389367	170374670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_170378974_170383678_170383851_170385313_170385472_170389258
transcript_7850.known	chr1	-	2985	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	106.615612782035	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	-29	True	NA	-29	True	GATAAA	-17	NA	156728766	156721894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
transcript_78502.nnic	chr5	-	1393	4	NNC	ENSG00000253348.1	novel	345	2	NA	NA	-1	1675	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGTTTCTTGGTCTAT	-1	True	NA	0	True	AATAGA	-18	NA	170767559	170745371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170767307
transcript_78509.known	chr5	+	1199	7	FSM	ENSG00000204764.14	ENST00000443155.5	1199	7	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_5	7.14142842854285	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACTTTCAGACTTTCA	-15	True	NA	NA	False	NA	NA	NA	170861869	170911409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968
transcript_78512.known	chr5	+	2182	6	FSM	ENSG00000204764.14	ENST00000519130.5	2182	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	7.57363849150459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACAAGGACTGCACT	8	True	NA	NA	False	NA	NA	NA	170862022	170911342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660
transcript_78519.known	chr5	+	1338	12	FSM	ENSG00000181163.14	ENST00000517671.5	1338	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6009.66119835455	2406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTTTCTATTGACTT	NA	False	NA	13	True	AATAAA	-21	NA	171387115	171410883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171387235_171387932_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_7852.nic	chr1	-	2825	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	107.08667309967	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	7	True	NA	-29	True	GATAAA	-17	NA	156728567	156721894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
transcript_78528.known	chr5	+	1263	10	FSM	ENSG00000181163.14	ENST00000521672.6	1263	10	0	0	0	0	multi-exon	FALSE	canonical	2	214	junction_1	6498.01663377676	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	NA	False	NA	3	True	AATAAA	-11	NA	171387798	171410873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_78534.known	chr5	+	1237	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_7	6278.76010406867	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	NA	False	NA	14	True	AATAAA	-22	NA	171387828	171410884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
transcript_78535.known	chr5	+	1346	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	7990.83906681492	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	-9	True	NA	17	True	AATAAA	-25	NA	171387842	171410887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
transcript_78536.known	chr5	+	3605	10	FSM	ENSG00000181163.14	ENST00000676625.1	3605	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_5	1244.47026758922	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	NA	False	NA	-2	True	AATAAA	-6	NA	171387827	171410868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171407775_171410526
transcript_78537.known	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_9	5787.62785258347	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	NA	False	NA	-15	True	AATATA	-6	NA	171387826	171410855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_78538.known	chr5	+	1382	10	FSM	ENSG00000181163.14	ENST00000518587.2	1382	10	0	0	0	0	multi-exon	FALSE	canonical	3	19193	junction_9	932.916031048698	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_78539.known	chr5	+	1571	10	FSM	ENSG00000181163.14	ENST00000521260.2	1571	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_4	1011.6003944368	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	0	True	NA	3	True	AATAAA	-11	NA	171387851	171410873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_7854.nic	chr1	-	2352	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	0	-369	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	115.566238822398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATTGTGTGGTCCCTT	-11	True	NA	NA	False	NA	NA	NA	156728441	156722263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_78540.known	chr5	+	1289	11	FSM	ENSG00000181163.14	ENST00000678774.1	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6283.24645386444	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392983_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_78541.known	chr5	+	268	2	FSM	ENSG00000181163.14	ENST00000523339.1	268	2	0	0	0	0	multi-exon	FALSE	canonical	3	21168	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTCAGCCTTTTA	0	True	NA	73	True	AATAAA	-12	NA	171387851	171390163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050
transcript_78542.known	chr5	+	1072	8	FSM	ENSG00000181163.14	ENST00000679233.1	1072	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	9014.59844148504	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGACAATAATTTTGAA	-9	True	NA	-5	True	AATAAA	-26	NA	171387842	171406736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171405301_171405404_171406396
transcript_78543.known	chr5	+	640	2	FSM	ENSG00000181163.14	ENST00000524204.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	19193	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	9674	False	NA	14	True	AATAAA	-22	NA	171407492	171410884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171407775_171410526
transcript_78544.known	chr5	+	1936	10	FSM	ENSG00000181163.14	ENST00000676504.1	1936	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_5	1219.42955698328	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATAAAGTAGCACGG	NA	False	NA	0	True	AATAAA	-8	NA	171387830	171410870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400926_171405301_171405404_171407699_171407775_171410526
transcript_78547.known	chr5	-	2988	3	FSM	ENSG00000168246.6	ENST00000393792.3	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	7	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTCTTTGCCTTTA	12	True	NA	-20	True	AAAAAG	-11	NA	172283764	172209645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_172212228_172234121_172234359_172283595
transcript_78549.known	chr5	+	2903	10	FSM	ENSG00000113719.17	ENST00000393784.8	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_8	18.7603469393279	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGTGTGATTCTTTC	-4	True	NA	29	True	ATTAAA	-18	NA	172834250	172952683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172924004_172924110_172926508_172926570_172932435_172932537_172935187_172935311_172950708
transcript_78551.known	chr5	+	742	4	FSM	ENSG00000037241.7	ENST00000521476.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	393.146565827838	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACATAGTATTTGCATT	8	True	NA	23	True	AATAAA	-20	NA	172958892	172969721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172959008_172959864_172960042_172968458_172968600_172969412
transcript_78552.known	chr5	+	722	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	191.628691890217	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	-23	True	NA	11	True	AATAAA	-17	NA	172959423	172969771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
transcript_78553.known	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	379.484152794583	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	13	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
transcript_78556.known	chr5	+	773	3	FSM	ENSG00000113732.9	ENST00000265093.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	820.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTCGGTGTTTGTAA	9	True	NA	34	True	AATAAA	-24	NA	172983815	173034892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172983965_173020237_173020368_173034398
transcript_78557.known	chr5	+	718	3	FSM	ENSG00000113732.9	ENST00000519911.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	820.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAATCTGGGCTCGGT	-26	True	NA	26	True	AATAAA	-16	NA	172983780	173034884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172983965_172994774_172994823_173034398
transcript_78558.known	chr5	+	1419	4	FSM	ENSG00000113732.9	ENST00000519374.6	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_2	45.7917993628651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCATGGCTTTTTGAC	-36	True	NA	15	True	ATTAAA	-25	NA	172983770	173035445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_172983965_172994774_172994823_173020237_173020368_173034398
transcript_78559.known	chr5	+	7778	9	FSM	ENSG00000164463.12	ENST00000296953.6	7778	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	7.45716936913733	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTGAATTGTTTGCCTC	-23	True	NA	NA	False	AATAAA	-18	NA	173056351	173139284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314_173091402_173108623_173108819_173110521_173110712_173112305_173112380_173123079_173123203_173133629
transcript_78561.known	chr5	+	1339	7	FSM	ENSG00000113734.18	ENST00000231668.13	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	62.9197019135413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTTTATTTAATAGA	NA	False	NA	-12	True	AAGAAA	-34	NA	173144441	173164340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_78562.known	chr5	+	1168	6	FSM	ENSG00000113734.18	ENST00000351486.10	1168	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	11.6378692207809	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTGGGAATGTGTGTT	0	True	NA	35	True	AATAAA	-23	NA	173144530	173164387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_78563.known	chr5	+	721	5	FSM	ENSG00000113734.18	ENST00000393770.4	721	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	65.1819568592414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCACTTTTCTGCAAGTA	15	True	NA	NA	False	NA	NA	NA	173144545	173164057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173159932_173160052_173163724
transcript_78564.known	chr5	-	4254	4	FSM	ENSG00000113739.11	ENST00000265087.9	4254	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	8.73053390247253	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTTGAGTAGCGTCAT	1	True	NA	-18	True	AATAAA	-18	NA	173328414	173314722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_173318250_173323218_173323431_173325867_173326011_173328042
transcript_78565.known	chr5	-	1921	4	FSM	ENSG00000145919.11	ENST00000311086.9	1921	4	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_2	87.3091569589862	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCCTTGGATAATATA	-2	True	NA	-41	True	NA	NA	NA	173616650	173607144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_173608293_173609237_173609435_173613130_173613256_173616199
transcript_78568.known	chr5	+	1670	7	FSM	ENSG00000113742.14	ENST00000657000.1	1670	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.9462219947249	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGCTAGGTTTATTTT	3	True	NA	NA	False	AATAAA	-18	NA	173918200	173956845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_173918255_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_78571.known	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_9	90.4416386406173	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	-6	True	NA	-14	True	AATAAA	-18	NA	175478559	175529742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
transcript_7858.nic	chr1	-	2010	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	0	-711	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	115.566238822398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATTAACCTGGTTGG	-11	True	NA	NA	False	NA	NA	NA	156728441	156722605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_78592.nic	chr5	+	992	7	ISM	ENSG00000164466.13	ENST00000321442.10	4066	11	-31	16004	-31	0	5prime_fragment	FALSE	canonical	3	697	junction_6	58.7832648142498	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTATGTGCAGTGGTG	14	False	NA	11	True	AATAAA	-15	NA	175478528	175513738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462
transcript_78595.known	chr5	+	637	5	FSM	ENSG00000164466.13	ENST00000502393.5	637	5	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	31.666228067138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTAAATCCCTCTATT	9	True	NA	NA	False	AATAAA	-26	NA	175478574	175511579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450
transcript_78601.known	chr5	+	527	2	FSM	ENSG00000164466.13	ENST00000507395.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGATAGCACCACCACCT	-1	True	NA	NA	False	NA	NA	NA	175478564	175492546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175478640_175492094
transcript_78602.known	chr5	+	592	3	FSM	ENSG00000164466.13	ENST00000508290.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	410.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAGACAA	-2	True	NA	NA	False	AAAACA	-31	NA	175478563	175509403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175478640_175492094_175492268_175509060
transcript_78603.known	chr5	+	2561	3	FSM	ENSG00000113749.8	ENST00000377291.2	2561	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	20.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTGCCACTCTTGGGT	8	True	NA	5	True	TATAAA	-29	NA	175658029	175686242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_175658156_175682708_175684310_175685408
transcript_78607.nnic	chr5	-	1542	7	NNC	ENSG00000051596.10	novel	1601	6	NA	NA	-2	28	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	303.932923886541	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATTTTCCTTTTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	175968317	175917844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_175918173_175959919_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_7861.nic	chr1	-	1995	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-7	-711	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	107.08667309967	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATTAACCTGGTTGG	-18	True	NA	NA	False	NA	NA	NA	156728448	156722605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
transcript_78610.nic	chr5	-	1301	6	NIC	ENSG00000051596.10	novel	1796	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	319.92411600253	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAATAAGTAAATGTTAT	NA	False	NA	NA	False	AAAACA	-26	NA	175968317	175917872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_175918173_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_78612.known	chr5	-	1601	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_1	88.2011337795609	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	NA	False	NA	-14	True	AATAAA	-22	NA	175968315	175959530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_78615.known	chr5	-	1796	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	75.0633066151499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGTTAATACTGGTA	NA	False	NA	NA	False	NA	NA	NA	175968280	175960218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_78622.nic	chr5	-	2074	2	NIC	ENSG00000283235.2	novel	1612	13	NA	NA	-83	-5659	intron_retention	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTGAATTTATACTA	NA	False	NA	NA	False	NA	NA	NA	176199378	176185665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176187597_176199235
transcript_78624.nic	chr5	-	2978	9	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	231.362776554484	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	252	False	NA	-7	True	AATAAA	-22	NA	176361528	176346061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361173
transcript_78625.known	chr5	-	2786	9	FSM	ENSG00000122203.15	ENST00000298569.9	2786	9	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_6	44.6764409392691	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	16	True	NA	-7	True	AATAAA	-22	NA	176361764	176346061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361601
transcript_78626.known	chr5	-	2700	8	FSM	ENSG00000122203.15	ENST00000393725.6	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	242.836049504137	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	15	True	NA	-7	True	AATAAA	-22	NA	176361765	176346061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359810_176359919_176361601
transcript_78628.known	chr5	-	2631	7	FSM	ENSG00000122203.15	ENST00000614420.4	2631	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	260.338508271229	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	NA	False	NA	-10	True	AATAAA	-19	NA	176361807	176346064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176361601
transcript_78629.nnic	chr5	-	2584	7	NIC	ENSG00000122203.15	novel	2700	8	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	253.172317250963	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	176361828	176346061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176359810_176359919_176361601
transcript_78631.known	chr5	-	2452	6	FSM	ENSG00000122203.15	ENST00000620366.4	2452	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	278.238458880148	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	NA	False	NA	-10	True	AATAAA	-19	NA	176361807	176346064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176361601
transcript_78632.nic	chr5	-	2419	6	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	259.302911668959	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	176361828	176346061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176359480_176359568_176359810_176359919_176361601
transcript_78634.nnic	chr5	-	2193	4	NIC	ENSG00000122203.15	novel	2700	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	319.796115604232	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-17	True	NA	-7	True	AATAAA	-22	NA	176361797	176346061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176361601
transcript_78639.known	chr5	-	1087	5	FSM	ENSG00000048162.22	ENST00000618911.4	1087	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	387.077188684634	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGTGTGTACATAATAA	9117	False	NA	-46	True	NA	NA	NA	176388927	176383980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176384287_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_78643.known	chr5	-	881	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	97.7177056627917	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGATGATTTTGTAT	-9	True	NA	-11	True	AATAAA	-15	NA	176388598	176383945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_78644.known	chr5	-	1085	5	FSM	ENSG00000175416.16	ENST00000345807.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	4.74341649025257	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-5	True	NA	-49	True	NA	NA	NA	176416539	176392500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_78649.known	chr5	-	1000	4	FSM	ENSG00000048162.22	ENST00000509257.1	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_3	23.6267268622258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTAATTTATTGTTTTTG	21	True	NA	NA	False	NA	NA	NA	176388568	176384642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176385328_176386839_176386910_176388234_176388344_176388432
transcript_78653.known	chr5	+	654	2	FSM	ENSG00000146066.3	ENST00000274787.3	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	0	972	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATCATCCCCATGGT	1	True	NA	36	True	AATAAA	-25	NA	176388750	176389761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_176388974_176389330
transcript_78655.known	chr5	+	4485	11	FSM	ENSG00000113194.13	ENST00000261942.7	4485	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	106.996682191552	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGGCTGTGGATCTTTC	-2	True	NA	36	True	ATTAAA	-22	NA	176448384	176510074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913_176499086_176500002_176500147_176506767
transcript_7866.known	chr1	-	3303	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-5	True	NA	-25	True	GATAAA	-21	NA	156728435	156721890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156723463_156724147_156724349_156726905
transcript_78663.nnic	chr5	+	1331	7	NNC	ENSG00000175766.13	novel	564	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.49443825784929	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAATTATTTTTAAGAG	2	True	NA	NA	False	AATAAA	-15	NA	176642927	176646644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_176642976_176643081_176643267_176643638_176643735_176644375_176644440_176645129_176645244_176645376_176645422_176645865
transcript_78664.nic	chr5	+	1488	7	NIC	ENSG00000175766.13	novel	514	6	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	1.63299316185545	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAATTATTTTTAAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	176642865	176646644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_176642976_176643081_176643267_176643638_176643735_176644375_176644440_176645129_176645244_176645376_176645517_176645865
transcript_78672.known	chr5	-	2570	15	FSM	ENSG00000087206.17	ENST00000377227.8	2570	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.8393848849912	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCCTTCATGTTGC	343	False	NA	3	True	AATAGA	-14	NA	177006408	176905004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
transcript_78673.known	chr5	-	2467	15	FSM	ENSG00000087206.17	ENST00000512031.5	2467	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	42.366777993506	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATGTTTGTACGAAA	36	True	NA	-45	True	TTTAAA	-2	NA	177006715	176905052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969596_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_78677.nic	chr5	-	1840	14	NIC	ENSG00000087206.17	novel	2570	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	51.5280127180794	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	291	False	NA	-42	True	AATATA	-1	NA	177006460	176905049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
transcript_78678.nic	chr5	-	1795	14	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	43.5739186960795	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-30	True	NA	-42	True	AATATA	-1	NA	177006781	176905049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_78683.nnic	chr5	-	1689	13	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	43.5666794185138	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-30	True	NA	-42	True	AATATA	-1	NA	177006781	176905049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_78690.known	chr5	+	4314	7	FSM	ENSG00000113761.12	ENST00000358149.8	4314	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	24.1344612996069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCTGAAAAAGGTATCA	-7	True	NA	NA	False	AATAAA	-35	NA	177022695	177067985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511
transcript_78695.known	chr5	+	977	5	FSM	ENSG00000113761.12	ENST00000513587.5	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	56.5790376376269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGGCAGGGCAGGA	5	False	NA	NA	False	NA	NA	NA	177022734	177065018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177062057_177062152_177064511
transcript_78696.nic	chr5	+	3074	18	NIC	ENSG00000160867.15	novel	3093	18	NA	NA	-30	0	combination_of_known_junctions	TRUE	canonical	3	99	junction_1	85.1854480156864	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	-5	True	NA	34	True	AATAAA	-19	NA	177086874	177098144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177087019_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_78698.known	chr5	+	2638	18	FSM	ENSG00000160867.15	ENST00000502906.5	2638	18	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	52.3177674306476	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGCCTGACACAGTGC	5	True	NA	NA	False	GGGGCT	-3	NA	177086913	177097732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_78699.known	chr5	+	3093	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	94.0906211197427	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	6	True	NA	34	True	AATAAA	-19	NA	177086914	177098144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_78712.nnic	chr5	+	1990	6	FSM	ENSG00000165671.22	ENST00000508896.6	1436	6	-554	0	-554	0	multi-exon	FALSE	canonical	3	49	junction_1	43.8570404838265	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	NA	False	NA	NA	False	GATAAA	-1	NA	177131275	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177131935_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_78713.nnic	chr5	+	1797	6	NIC	ENSG00000165671.22	novel	1436	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	65.668866291417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	-6	True	NA	NA	False	GATAAA	-1	NA	177131788	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177131935_177135086_177135521_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_78714.nic	chr5	+	1694	6	ISM	ENSG00000165671.22	ENST00000354179.9	12136	24	-287	89698	-233	0	5prime_fragment	FALSE	canonical	3	14	junction_1	57.7220928241518	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	960	False	NA	NA	False	GATAAA	-1	NA	177132791	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133155_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_78715.nic	chr5	+	1543	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-159	89698	-27	0	5prime_fragment	FALSE	canonical	3	134	junction_1	11.6206712370672	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	65	False	NA	NA	False	GATAAA	-1	NA	177133740	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_78717.nnic	chr5	+	1403	6	NNC	ENSG00000165671.22	novel	1286	6	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	62.0921895249314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	188	False	NA	NA	False	GATAAA	-1	NA	177133971	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_177134044_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_78718.nic	chr5	+	1410	6	ISM	ENSG00000165671.22	ENST00000347982.9	7688	24	-62	85309	-6	0	5prime_fragment	FALSE	canonical	3	17	junction_1	56.5310534131463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	-15	True	NA	NA	False	GATAAA	-1	NA	177134166	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177134246_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_78719.nnic	chr5	+	2210	5	NIC	ENSG00000165671.22	novel	1436	6	NA	NA	-34	0	intron_retention	FALSE	canonical	3	49	junction_1	46.932797700542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	1	True	NA	NA	False	GATAAA	-1	NA	177131795	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177131935_177135086_177136031_177191883_177192020_177204119_177204293_177209635
transcript_7872.known	chr1	-	872	2	FSM	ENSG00000143319.17	ENST00000496538.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGGAAAAAGTCCTA	1447	False	NA	NA	False	NA	NA	NA	156727386	156723957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156724349_156726905
transcript_78722.nic	chr5	+	669	5	ISM	ENSG00000165671.22	ENST00000510954.6	1706	7	-113	34969	-27	-5832	5prime_fragment	FALSE	canonical	3	134	junction_1	12.3161479367536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGTCCTTAGGAGA	65	False	NA	NA	False	NA	NA	NA	177133740	177204236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119
transcript_78723.nic	chr5	+	2283	5	ISM	ENSG00000165671.22	ENST00000689326.1	4376	9	-27	36291	-27	0	5prime_fragment	FALSE	canonical	3	134	junction_1	12.1140414395857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	65	False	NA	NA	False	GATAAA	-1	NA	177133740	177210453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133953_177135086_177136031_177191883_177192020_177204119_177204293_177209635
transcript_78730.nnic	chr5	+	667	3	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-44	74109	-44	-1	5prime_fragment	FALSE	canonical	3	49	junction_1	56	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGTTTTGGCCTGCCA	NA	False	NA	NA	False	ATTAAA	-13	NA	177131785	177136344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177131935_177135086_177135201_177135940
transcript_78732.nic	chr5	+	730	3	ISM	ENSG00000165671.22	ENST00000510954.6	1706	7	-113	102861	-27	-1	5prime_fragment	FALSE	canonical	3	134	junction_1	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGTTTTGGCCTGCCA	65	False	NA	NA	False	ATTAAA	-13	NA	177133740	177136344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133953_177135086_177135201_177135940
transcript_78733.nnic	chr5	+	1408	2	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-43	74107	-43	1	intron_retention	FALSE	canonical	3	49	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTTGGCCTGCCAGC	-8	True	NA	NA	False	ATTAAA	-15	NA	177131786	177136346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177131935_177135086
transcript_78734.known	chr5	+	470	2	ISM	ENSG00000165671.22	ENST00000689549.1	7734	20	0	149938	0	-919	5prime_fragment	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCAATTGTTTGCACTT	1	True	NA	NA	False	AAAAAG	-16	NA	177133024	177135426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177133155_177135086
transcript_78736.known	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	14	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177133953_177135086
transcript_78737.known	chr5	+	7688	24	FSM	ENSG00000165671.22	ENST00000347982.9	7688	24	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	44.9525689961906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAATTCAATTCCGCT	47	False	NA	12	True	AATAAA	-20	NA	177134228	177295762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177134246_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
transcript_78739.known	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	41.6876405544857	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-4	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_78740.known	chr5	-	1588	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	19.7484176581315	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-17	True	NA	-27	True	AATAAA	-23	NA	177303719	177301197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_78741.nic	chr5	-	1496	8	NIC	ENSG00000169228.14	novel	1236	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	38	junction_7	43.0116263352131	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	8522	False	NA	-5	True	AATAAA	-22	NA	177303748	177301450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_78742.known	chr5	-	1820	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	9.77098880473324	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	4	True	NA	-27	True	AATAAA	-23	NA	177303733	177301197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_78745.known	chr5	-	1483	6	FSM	ENSG00000213347.11	ENST00000439742.7	1067	6	-411	-5	-411	3	multi-exon	FALSE	canonical	3	86	junction_1	6.43117407632541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	NA	False	NA	-4	True	ATTAAA	-20	NA	177312309	177307204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
transcript_78747.known	chr5	-	1534	5	FSM	ENSG00000213347.11	ENST00000423571.6	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	4.65698400254929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCCCGGGCAAGTCACC	14	True	NA	NA	False	NA	NA	NA	177311895	177306816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
transcript_78749.known	chr5	-	1608	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.4	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCCCTTTCCCTGCT	21	True	NA	-6	True	AATAAA	-21	NA	177303681	177301451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
transcript_7875.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	0	0	0	multi-exon	FALSE	canonical	2	123	junction_5	79.5547610140336	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGCTGCT	2	True	NA	-13	True	AATAAA	-15	NA	156741131	156737304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
transcript_78753.nnic	chr5	-	1562	9	NNC	ENSG00000169223.15	novel	1611	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	814.786695629599	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-16	True	NA	-32	True	AATAAA	-14	NA	177351678	177331566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451_177351564_177351622
transcript_78757.known	chr5	-	1149	8	FSM	ENSG00000169223.15	ENST00000515209.5	1149	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	856.973530894077	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCGGGATTATAAAAG	15	True	NA	-86	True	NA	NA	NA	177351647	177332030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177332270_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_7876.known	chr1	-	990	6	FSM	ENSG00000143314.12	ENST00000434558.5	990	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	118.988066628549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAGACACATCAGTGGA	9991	False	NA	NA	False	NA	NA	NA	156741590	156737529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741179
transcript_78760.known	chr5	-	1611	8	FSM	ENSG00000169223.15	ENST00000303127.12	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	2229	junction_4	150.905701059453	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-6	True	NA	-32	True	AATAAA	-14	NA	177351668	177331566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_78767.known	chr5	+	1536	11	FSM	ENSG00000169220.18	ENST00000511890.1	1536	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	35.610251333008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCCACAATGGGGGAG	9057	False	NA	NA	False	NA	NA	NA	177366942	177372298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177367035_177367413_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_78769.nic	chr5	+	1857	10	ISM	ENSG00000169220.18	ENST00000511890.1	1536	11	356	-298	-3	0	3prime_fragment	FALSE	canonical	3	53	junction_3	30.0813711271426	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9413	False	NA	9	True	NA	NA	NA	177367298	177372596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_78771.nic	chr5	+	2188	9	NIC	ENSG00000169220.18	novel	1536	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	53	junction_2	30.8210561142865	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9413	False	NA	9	True	NA	NA	NA	177367298	177372596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177367558_177367713_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_78772.nnic	chr5	+	1717	9	NIC	ENSG00000169220.18	novel	1536	11	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	41.7185510294881	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9441	False	NA	9	True	NA	NA	NA	177367326	177372596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_177367558_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_78775.known	chr5	-	1573	4	FSM	ENSG00000131187.10	ENST00000510358.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.6418242755334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAATAAAGTGCTTT	5107	False	NA	-40	True	NA	NA	NA	177404472	177402171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480
transcript_78777.known	chr5	-	943	3	FSM	ENSG00000131187.10	ENST00000504406.5	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGCTTTGAAAATGCT	-8	True	NA	-31	True	NA	NA	NA	177403750	177402162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177402460_177402549_177402699_177403253
transcript_78778.known	chr5	-	2995	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_6	129.320207146182	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGCCTGCCCTGACC	9754	False	NA	-37	True	AATAAA	-19	NA	177473741	177456607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_78783.known	chr5	-	2667	13	FSM	ENSG00000113758.14	ENST00000472831.5	2667	13	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_6	131.32495214374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCCCTCCCCG	11	True	NA	-23	True	AATAAA	-19	NA	177473624	177456933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467818_177468107_177468221_177468843_177468900_177473435
transcript_78784.known	chr5	-	1686	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	161.178426618144	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	5088	False	NA	-8	True	AATAAA	-17	NA	177497561	177483393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78787.nic	chr5	-	2491	14	NIC	ENSG00000196923.14	novel	1686	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_8	156.396439070224	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-3	True	NA	-8	True	AATAAA	-17	NA	177497605	177483393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78788.known	chr5	-	1567	13	FSM	ENSG00000196923.14	ENST00000359895.6	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	190.158906502489	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	5088	False	NA	-8	True	AATAAA	-17	NA	177497561	177483393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78791.known	chr5	-	1712	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	124.510262852327	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-2	True	NA	-8	True	AATAAA	-17	NA	177497604	177483393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78797.nic	chr5	-	1026	9	NIC	ENSG00000196923.14	novel	977	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	193.039463258164	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	-3	True	NA	-19	True	AATAAA	-15	NA	177497605	177490245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78800.known	chr5	-	977	8	FSM	ENSG00000196923.14	ENST00000355572.6	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	111.535296874934	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	5076	False	NA	-19	True	AATAAA	-15	NA	177497573	177490245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_78807.known	chr5	-	2099	17	FSM	ENSG00000183258.12	ENST00000330503.12	2099	17	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_16	41.6005934452863	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-2	True	NA	-17	True	ATTAAA	-19	NA	177516961	177511576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724_177516836_177516918
transcript_78808.known	chr5	-	580	2	FSM	ENSG00000146067.16	ENST00000506879.5	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGCATGTTGGTGATT	NA	False	NA	-2	True	GATAAA	-17	NA	177522162	177519790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_177520182_177521973
transcript_78809.known	chr5	+	541	1	FSM	ENSG00000272459.1	ENST00000606358.1	541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCATGCCTGGGCT	NA	False	NA	NA	False	ATTAAA	-21	NA	177554823	177555364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177554800_177555400
transcript_78810.known	chr5	+	1698	6	FSM	ENSG00000027847.14	ENST00000029410.10	1698	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	10.2489023802552	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGGCCAGACAAAATGT	-26	True	NA	23	True	AAAAAG	-3	NA	177600131	177610330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177600261_177604178_177604542_177607301_177607528_177608538_177608623_177608909_177609015_177609539
transcript_78812.known	chr5	+	1056	6	FSM	ENSG00000170089.16	ENST00000512851.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_5	142.927394155214	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTTGTAGGGAGAGGA	32	False	NA	NA	False	NA	NA	NA	177875594	177883831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651_177882753_177883666
transcript_78817.known	chr5	+	3911	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	69.2257899918809	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCACTTTGTTG	-6	True	NA	6	True	ATTAAA	-18	NA	178131013	178150568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_78828.known	chr5	-	780	4	FSM	ENSG00000145912.9	ENST00000274606.8	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	5082	junction_2	201.939484884843	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGAGTCTGTGGGTGT	5	True	NA	NA	False	AGTAAA	-15	NA	178153885	178149462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178149839_178150887_178150994_178153490_178153561_178153657
transcript_78829.known	chr5	-	475	3	FSM	ENSG00000145912.9	ENST00000511078.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	5082	junction_1	87	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGAGTGTGGGAAAGA	-4	True	NA	NA	False	NA	NA	NA	178153894	178150825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178150994_178153490_178153561_178153657
transcript_7883.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_5	74.666190474672	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	6	True	NA	-11	True	AATAAA	-17	NA	156741088	156737302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
transcript_78830.known	chr5	-	599	3	FSM	ENSG00000145912.9	ENST00000314397.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	2489	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATGCTAAGACTAAAAT	110	False	NA	NA	False	ACTAAA	-30	NA	178153829	178149481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178149839_178153490_178153561_178153657
transcript_78835.nic	chr5	-	2588	14	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	28.9193942008948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-21	True	NA	-5	True	CATAAA	-14	NA	178627075	178602663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178619837_178619897_178623255_178623417_178626945
transcript_78838.known	chr5	-	2504	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	21.8344465365064	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	4	True	NA	-5	True	CATAAA	-14	NA	178627050	178602663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
transcript_78844.nic	chr5	-	1769	13	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	9	-124	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	26.174096609689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTAAATACCTTTGA	-25	True	NA	-133	True	ATTAAA	-24	NA	178627079	178603395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178623255_178623417_178626945
transcript_78845.known	chr5	-	1955	13	FSM	ENSG00000113240.14	ENST00000522136.5	1955	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	33.3637361350447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGTACTAGAAACCAA	-1	True	NA	95	True	NA	NA	NA	178627055	178603167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178605824_178605866_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_78847.nic	chr5	-	2505	12	NIC	ENSG00000113240.14	novel	2504	13	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_10	13.4557738996934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	3471	False	NA	-5	True	CATAAA	-14	NA	178627142	178602663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_78848.nic	chr5	-	1807	12	NIC	ENSG00000113240.14	novel	2504	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_10	13.4557738996934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAAAGGAATATTCT	4	True	NA	-7	True	AGTAAA	-21	NA	178627050	178603269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_78851.nic	chr5	-	1592	12	NIC	ENSG00000113240.14	novel	1955	13	NA	NA	-6	-224	combination_of_known_junctions	FALSE	canonical	3	63	junction_10	13.4557738996934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATGTTTTGTATCAA	-7	True	NA	3	True	ATTAAA	-25	NA	178627061	178603495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_78856.known	chr5	-	1690	2	FSM	ENSG00000113240.14	ENST00000520957.1	1690	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCCACTGATTAT	24	True	NA	NA	False	ATTAAA	-19	NA	178627030	178621811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178623417_178626945
transcript_78858.known	chr5	-	2521	5	FSM	ENSG00000169131.13	ENST00000335815.7	2521	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	22.4388056723169	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTTTGTTCTAGTA	10	True	NA	-10	True	ATTAAA	-16	NA	178730659	178711511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989_178729074_178730555
transcript_78861.known	chr5	+	2794	5	FSM	ENSG00000178338.11	ENST00000322434.8	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	10.4642247682282	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTCTTCTTTGTTGT	-13	True	NA	1	True	ATTAAA	-11	NA	178859952	178885020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708
transcript_78867.known	chr5	+	2410	5	FSM	ENSG00000198939.8	ENST00000361362.7	2410	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTCTTTTACGATCT	1	True	NA	NA	False	TATAAA	-20	NA	178895912	178933212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_178895975_178912583_178912720_178912981_178913072_178916564_178916711_178931236
transcript_78868.known	chr5	+	3252	5	FSM	ENSG00000234284.7	ENST00000444149.7	3252	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.11737237261468	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCCATGGTGGCGG	-1	True	NA	NA	False	AATACA	-16	NA	179023803	179035064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179023905_179024969_179025038_179027472_179027600_179028031_179028128_179032204
transcript_7887.known	chr1	+	2068	7	FSM	ENSG00000143294.15	ENST00000271526.9	2068	7	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_1	147.231582511664	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	-3	True	NA	17	True	AATAAA	-18	NA	156767534	156800815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_156768240_156782281_156782330_156786607_156787175_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_78876.known	chr5	+	2636	18	FSM	ENSG00000176783.15	ENST00000319449.9	2636	18	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_1	39.2638136051954	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	-3	True	NA	15	True	AATAAA	-16	NA	179550553	179610012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_78877.known	chr5	+	2454	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	62.3995386372794	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	9135	False	NA	15	True	AATAAA	-16	NA	179559691	179610012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_78879.known	chr5	+	2642	17	FSM	ENSG00000176783.15	ENST00000437570.6	2642	17	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_5	37.402372919375	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	9135	False	NA	14	True	AATAAA	-15	NA	179559691	179610011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_78883.known	chr5	+	2320	16	FSM	ENSG00000176783.15	ENST00000393448.6	2320	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	83.291456144473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGGACTGTGGAACTTG	279	False	NA	NA	False	NA	NA	NA	179550835	179602571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179586330_179586476_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891
transcript_78895.known	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_13	94.2513949169294	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	882	False	NA	-3	True	AATAAA	-21	NA	179623710	179614177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_7890.nic	chr1	+	1973	6	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	477.373396828939	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	-4	True	NA	17	True	AATAAA	-18	NA	156767533	156800815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156794664_156794809_156797275_156797342_156800373
transcript_78901.nic	chr5	-	2213	14	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	3	46	junction_3	143.350482896799	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-5	True	NA	-3	True	AATAAA	-21	NA	179623674	179614177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_78907.nic	chr5	-	2190	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	128.381890164549	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-5	True	NA	-6	True	AATAAA	-18	NA	179623674	179614180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_7891.known	chr1	-	966	6	FSM	ENSG00000143321.19	ENST00000482651.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	664.093969254352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCTGGGGCCTGGGAC	4997	False	NA	NA	False	NA	NA	NA	156747471	156743155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156747434
transcript_78916.known	chr5	-	2248	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_13	96.6853617234669	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	871	False	NA	-4	True	AATAAA	-20	NA	179623721	179614178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_78917.known	chr5	-	2114	12	FSM	ENSG00000169045.17	ENST00000329433.10	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	113.561357063844	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	1424	False	NA	-6	True	AATAAA	-18	NA	179623168	179614180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
transcript_78918.known	chr5	-	761	4	FSM	ENSG00000169045.17	ENST00000513972.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	105.24996700976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTCAGAGTAGATCTTT	882	False	NA	NA	False	AATGAA	-39	NA	179623710	179620674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179621036_179621241_179621398_179623036_179623165_179623594
transcript_78919.known	chr5	+	5030	16	FSM	ENSG00000127022.16	ENST00000680984.1	5030	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	1289.50638962701	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	-45	True	NA	-2	True	AATAAA	-4	NA	179698934	179731622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179715898_179716001_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_7892.known	chr1	-	2171	6	FSM	ENSG00000143321.19	ENST00000368209.9	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	649.364489327835	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	-1	True	NA	-7	True	AATAAA	-15	NA	156752233	156742109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752037
transcript_78921.known	chr5	+	5103	16	FSM	ENSG00000127022.16	ENST00000681072.1	5103	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1253.88786668594	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	-24	True	NA	-2	True	AATAAA	-4	NA	179698955	179731622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179699574_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78923.known	chr5	+	5162	16	FSM	ENSG00000127022.16	ENST00000513246.6	5162	16	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	1244.79430518549	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	-3	True	NA	-2	True	AATAAA	-4	NA	179698976	179731622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179704154_179704431_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78924.known	chr5	+	4207	15	FSM	ENSG00000127022.16	ENST00000452673.6	4207	15	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	900.528767571858	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGACTGAATTTCTT	506	False	NA	33	True	ATTAAA	-18	NA	179698905	179730925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78929.known	chr5	+	4915	15	FSM	ENSG00000127022.16	ENST00000247461.9	4915	15	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_13	285.415388298443	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	-13	True	NA	17	True	AATAAA	-23	NA	179698966	179731641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_7893.known	chr1	-	960	6	FSM	ENSG00000143321.19	ENST00000368206.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	635.434213746789	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTCCTCTTCTAC	-20	True	NA	NA	False	NA	NA	NA	156752448	156743344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752228
transcript_78935.known	chr5	+	4822	15	FSM	ENSG00000127022.16	ENST00000681476.1	4822	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	972.922561782021	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	-36	True	NA	-2	True	AATAAA	-4	NA	179698943	179731622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699006_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78937.known	chr5	+	1876	14	FSM	ENSG00000127022.16	ENST00000514032.5	1876	14	0	0	0	0	multi-exon	FALSE	canonical	1	122	junction_3	986.616740034334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCCTGCAAGAGTGGTC	8	True	NA	NA	False	NA	NA	NA	179698987	179728682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78940.known	chr5	+	4687	13	FSM	ENSG00000127022.16	ENST00000681398.1	4687	13	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_2	1020.94886080983	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	63	False	NA	-2	True	AATAAA	-4	NA	179699042	179731622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_78946.known	chr5	+	855	5	FSM	ENSG00000127022.16	ENST00000502498.6	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	3817	junction_1	123.465329141423	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCATTAATAGTTTT	-41	True	NA	NA	False	NA	NA	NA	179698938	179708622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238
transcript_78948.known	chr5	-	5155	21	FSM	ENSG00000197226.13	ENST00000355235.8	5155	21	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_11	23.0618190956394	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGTAAATGTGGTC	-32	True	NA	-31	True	AATAAA	-21	NA	179907897	179862070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_7895.nic	chr1	-	1211	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2713	0	-10	0	3prime_fragment	FALSE	canonical	3	24	junction_3	8.61321658847611	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	-8	True	NA	-8	True	AATAAA	-30	NA	156814121	156806242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
transcript_78950.nic	chr5	+	2052	9	NIC	ENSG00000161011.20	novel	2253	7	NA	NA	21	0	combination_of_known_junctions	TRUE	canonical	1	58	junction_1	184.855179803001	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	26	False	NA	23	True	ATTAAA	-23	NA	179806428	179837255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr5_+_179806592_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_78952.nnic	chr5	+	1979	9	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-290	0	at_least_one_novel_splicesite	FALSE	canonical	1	165	junction_1	165.464828211315	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	13	True	NA	23	True	ATTAAA	-23	NA	179807033	179837255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_179807124_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_78955.nnic	chr5	+	1860	8	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-280	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.628197094496	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	23	False	NA	23	True	ATTAAA	-23	NA	179807043	179837255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_+_179807124_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_78957.nic	chr5	-	1346	8	ISM	ENSG00000161010.16	ENST00000522663.5	2879	9	-55	2143	-55	0	5prime_fragment	FALSE	canonical	2	12	junction_6	58.7651847506286	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	NA	False	NA	-13	True	AATAAA	-15	NA	179858915	179837275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
transcript_7896.nic	chr1	-	1381	4	NIC	ENSG00000027869.12	novel	1599	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	37	junction_2	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	-8	True	NA	-8	True	AATAAA	-30	NA	156814121	156806242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156806574_156807174_156807346_156809202_156809808_156813847
transcript_78962.known	chr5	-	1168	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	28.7851234726088	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-2	True	NA	-13	True	AATAAA	-15	NA	179858817	179837275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_78965.known	chr5	-	1096	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	59.4521656460049	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-19	True	NA	-13	True	AATAAA	-15	NA	179858834	179837275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
transcript_78966.known	chr5	-	868	6	FSM	ENSG00000161010.16	ENST00000521299.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	57.7408001330082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGGGAAGACCTCATGGG	16	False	179858860	NA	False	NA	NA	NA	179858844	179837526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179847977_179848067_179853377_179853438_179858730
transcript_78967.known	chr5	-	1004	5	FSM	ENSG00000161010.16	ENST00000376931.6	1004	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	66.7883784800919	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	7	True	NA	-3	True	AATAAA	-25	NA	179858808	179837265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
transcript_78968.known	chr5	+	1454	2	FSM	ENSG00000245317.2	ENST00000499601.2	1454	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTATTCAAATCTA	NA	False	NA	NA	False	AATAAA	-17	NA	179859012	179861283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179859213_179860029
transcript_78969.known	chr5	+	921	3	FSM	ENSG00000161011.20	ENST00000506042.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTCTAACCAGGGG	-5	True	NA	111	True	AAAAAG	-17	NA	179806397	179813024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_179806592_179811573_179811683_179812406
transcript_7897.nnic	chr1	-	923	4	NIC	ENSG00000027869.12	novel	1599	9	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	16.5193489244852	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	-8	True	NA	-8	True	AATAAA	-30	NA	156814121	156806242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_156806574_156807174_156807346_156809660_156809808_156813847
transcript_78971.known	chr5	-	1904	9	FSM	ENSG00000113269.14	ENST00000521389.6	1904	9	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_1	57.0920309675527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGAGTGTCAAAATGAT	-16	True	NA	NA	False	AATAAA	-16	NA	180071759	179955066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179955670_179963470_179963565_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_78973.known	chr5	-	697	2	FSM	ENSG00000113269.14	ENST00000523487.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGCTACTGGTCTTAT	NA	False	NA	-4	True	AATAAA	-22	NA	179978287	179976773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_179977386_179978202
transcript_78975.known	chr5	+	393	2	FSM	ENSG00000248367.2	ENST00000504573.2	465	2	69	3	69	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTATTC	44	False	NA	NA	False	AATAAA	-18	NA	180293244	180295253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180293419_180295034
transcript_78976.known	chr5	-	3034	19	FSM	ENSG00000131459.13	ENST00000253778.13	3034	19	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_9	110.06053328807	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-9	True	NA	-29	True	AATAAA	-15	NA	180353336	180300697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_7898.known	chr1	-	1539	4	FSM	ENSG00000117036.12	ENST00000326786.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTGTGTACTGTACAG	504	False	NA	NA	False	AATAAA	-23	NA	157138474	157133144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_157134228_157135470_157135709_157136306_157136366_157138315
transcript_78992.known	chr5	-	5833	30	FSM	ENSG00000037280.16	ENST00000261937.11	5833	30	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_27	15.7857986419242	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGTTGCTTTTATTG	-8	True	NA	-12	True	AATAAA	-31	NA	180649600	180601505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180603391_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020_180619110_180619252_180619367_180619664_180619770_180620172_180620309_180620608_180620716_180620875_180621008_180621105_180621253_180621541_180621905_180622730_180622840_180623934_180624062_180625868_180626032_180626110_180626266_180628881_180629000_180629258_180629428_180629695_180629836_180629942_180630106_180630224_180630338_180630554_180630800_180631681_180631779_180649487
transcript_79.known	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_6	1152.73999236601	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_7900.known	chr1	+	1459	2	FSM	ENSG00000271736.2	ENST00000670336.1	1459	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGGCAATTTGTATATAA	NA	False	NA	NA	False	AATAAA	-21	NA	157274854	157283968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_157274923_157282577
transcript_79000.known	chr5	-	534	2	FSM	ENSG00000131446.17	ENST00000505682.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCAATAACGTCTTTT	7737	False	NA	NA	False	NA	NA	NA	180802767	180795429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180795876_180802679
transcript_79003.known	chr5	+	1708	2	FSM	ENSG00000245060.8	ENST00000653411.1	1708	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	453	False	NA	31	True	AATAAA	-38	NA	180830936	180835726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180831230_180834311
transcript_79004.known	chr5	+	1817	2	FSM	ENSG00000245060.8	ENST00000659553.1	1817	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCGATCATTTATGTG	396	False	NA	42	True	AATAAA	-33	NA	180831415	180835737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180831807_180834311
transcript_79005.known	chr5	+	1231	3	FSM	ENSG00000245060.8	ENST00000508309.2	1231	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	-25	True	NA	31	True	AATAAA	-38	NA	180830994	180835726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180831230_180834311_180835003_180835421
transcript_79009.nnic	chr5	-	770	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	29.1318840219212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-7	True	NA	-3	True	AATAAA	-20	NA	180861276	180847610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr5_-_180848083_180851380_180851494_180860527_180860655_180861218
transcript_79014.known	chr5	-	3941	2	FSM	ENSG00000196670.14	ENST00000502412.2	3941	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-7	True	NA	-3	True	AATAAA	-20	NA	180861276	180847610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180851494_180861218
transcript_79015.known	chr5	-	725	4	FSM	ENSG00000196670.14	ENST00000506377.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.98146239020499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-16	True	NA	-3	True	AATAAA	-20	NA	180861285	180847610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_180848083_180851380_180851494_180851987_180852061_180861218
transcript_79018.known	chr5	+	339	1	FSM	ENSG00000231228.4	ENST00000511402.1	339	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAGCTGAACTGCAT	NA	False	NA	NA	False	NA	NA	NA	180982272	180982611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_180982300_180982600
transcript_79019.known	chr5	+	2696	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	4.22335585688414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	-6	True	NA	18	True	AATAAA	-19	NA	181223289	181235808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
transcript_7902.nnic	chr1	-	1697	5	NNC	ENSG00000143297.19	novel	2800	10	NA	NA	-11784	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	1.92028643696715	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGTGTACAGCCCTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	157540453	157523810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_157524558_157527616_157527896_157534613_157534893_157539085_157539365_157540340
transcript_79022.nic	chr5	+	1075	2	ISM	ENSG00000146063.20	ENST00000503114.1	1904	7	10317	0	669	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGGTCTGTTCCTTCA	2992	False	NA	17	True	AATAAA	-18	NA	181234374	181235807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr5_+_181234996_181235353
transcript_79028.known	chr5	-	1150	8	FSM	ENSG00000204628.12	ENST00000511473.5	1150	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4354.92945185249	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCAAAAAAGCTCCATT	-10	True	NA	0	True	AATAAA	-41	NA	181243916	181236908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243679
transcript_7904.known	chr1	+	3607	7	FSM	ENSG00000158473.8	ENST00000368171.5	3607	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.90410505906933	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCCTTCAAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	158178029	158186427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_158178069_158180818_158181163_158181454_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
transcript_79040.known	chr5	+	1046	3	FSM	ENSG00000233937.8	ENST00000506340.3	1061	3	14	1	0	-1	multi-exon	FALSE	canonical	3	19	junction_1	16	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTTGTACTGTTAACT	-15	True	NA	7	True	AATAAA	-16	NA	181246506	181257585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181246883_181247115_181247387_181257186
transcript_79043.known	chr5	+	529	3	FSM	ENSG00000248275.3	ENST00000509252.2	864	3	11	324	2	-4	multi-exon	FALSE	canonical	3	6	junction_2	80.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTGGCTGGGTGCGG	26	True	NA	NA	False	NA	NA	NA	181261223	181264257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181261385_181263627_181263790_181264051
transcript_79044.known	chr5	+	672	3	FSM	ENSG00000248275.3	ENST00000507434.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGTCAGTAAATGT	24	True	NA	NA	False	AATAAA	-19	NA	181261221	181272307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181261385_181271572_181271690_181271915
transcript_79047.known	chr5	+	886	2	FSM	ENSG00000233937.8	ENST00000505151.6	1280	2	394	0	378	0	multi-exon	FALSE	canonical	3	51	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTGTACTGTTAACTA	379	False	NA	8	True	AATAAA	-17	NA	181246900	181257586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181247387_181257186
transcript_79049.known	chr5	+	807	2	FSM	ENSG00000248275.3	ENST00000514146.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGCTGGGTGCGGTGGC	14	True	NA	NA	False	AAAAAG	-3	NA	181261211	181264261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_+_181261385_181263627
transcript_79052.known	chr5	-	633	2	FSM	ENSG00000183718.6	ENST00000688015.1	2856	2	886	1337	-63	-97	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAATGACATGAAC	1724	False	NA	NA	False	AAAACA	-20	NA	181260257	181256483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181256860_181260000
transcript_79054.known	chr5	-	370	2	FSM	ENSG00000183718.6	ENST00000510796.2	2801	2	822	1609	-130	-622	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATCACTCTGC	1657	False	NA	NA	False	NA	NA	NA	181260324	181257008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181257055_181260000
transcript_79055.known	chr5	-	888	2	FSM	ENSG00000204628.12	ENST00000509148.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	10650	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	6000	False	NA	-20	True	AATAAA	-21	NA	181238195	181236928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237720_181238098
transcript_79056.known	chr5	-	1208	9	FSM	ENSG00000204628.12	ENST00000508682.5	1208	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4810.38724402724	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	4	True	NA	23	True	AATAAA	-13	NA	181243902	181236936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240328_181241491_181241640_181242173_181242346_181243691
transcript_79057.known	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	3590.95048528312	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	306	False	NA	-17	True	AATAAA	-24	NA	181243889	181236925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
transcript_79058.known	chr5	-	825	6	FSM	ENSG00000204628.12	ENST00000511566.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5052.18647320148	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTTAGGTTTTTTT	315	False	NA	-25	True	AATAAA	-16	NA	181243880	181236933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_79059.known	chr5	-	1651	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	8280	junction_1	807.155223953581	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTACAAATAAAAAAAAAAC	248	False	NA	-1	True	NA	NA	NA	181243947	181236960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
transcript_7906.known	chr1	+	2883	12	FSM	ENSG00000163565.20	ENST00000295809.12	2883	12	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	3.77464354400485	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCTTCCCCAGCAGTC	-19	True	NA	5	True	AATAAA	-24	NA	159009906	159055151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159010162_159014660_159014946_159015871_159015988_159016532_159016701_159018228_159018652_159020340_159020530_159032523_159032692_159045296_159045465_159049431_159049600_159051678_159052099_159053532_159053725_159054820
transcript_79060.known	chr5	-	965	8	FSM	ENSG00000204628.12	ENST00000376817.8	965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4559.4531895563	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	3	True	NA	23	True	AATAAA	-13	NA	181243903	181236936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242214_181243691
transcript_79061.known	chr5	-	922	7	FSM	ENSG00000204628.12	ENST00000511900.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3812.61797267384	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGCTTTTCTGACTTT	315	False	NA	15	True	AATAAA	-5	NA	181243880	181236944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181242169_181242346_181243691
transcript_79062.known	chr5	-	3466	2	FSM	ENSG00000183718.6	ENST00000611618.1	3466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGCTTTCATTAATTTC	14	True	NA	-1	True	AATAAA	-20	NA	181261118	181255146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr5_-_181257495_181260000
transcript_79063.known	chr6	+	1485	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	56.1753813461712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	9	True	NA	16	True	AATAAA	-22	NA	292096	351355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
transcript_79064.known	chr6	+	3075	7	FSM	ENSG00000112679.15	ENST00000419235.7	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	50.4559764106845	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	-11	True	NA	16	True	AATAAA	-22	NA	292486	351355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768
transcript_79066.known	chr6	+	587	7	FSM	ENSG00000112679.15	ENST00000603726.5	587	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	52.562396782829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTAGTGATTTGTAA	42	False	NA	NA	False	AAAAAG	-22	NA	292539	350950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768_348842_350821
transcript_79068.known	chr6	+	1166	6	FSM	ENSG00000112679.15	ENST00000603795.5	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	38.2601620487943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGAGCAGTCTGTGCC	-36	True	NA	NA	False	NA	NA	NA	292461	349471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768
transcript_79070.nnic	chr6	-	3573	29	NIC	ENSG00000112685.14	novel	4456	28	NA	NA	11	-946	combination_of_known_splicesites	FALSE	canonical	2	44	junction_27	132.149164907366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGGTCCAGGTGTC	-16	True	NA	-3	True	ATTAAA	-24	NA	693128	486099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_689138_689213_693018
transcript_79071.nnic	chr6	-	3254	29	NNC	ENSG00000112685.14	novel	4456	28	NA	NA	-4	-948	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	107.783300171772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTGTGGTCCAGGTG	-3	True	NA	-5	True	ATTAAA	-22	NA	693115	486101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_486404_486633_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_79072.known	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	TRUE	canonical	2	371	junction_17	59.4526474090988	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-27	True	NA	-22	True	AATAAA	-15	NA	693139	485153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_79078.nic	chr6	-	2620	24	ISM	ENSG00000112685.14	ENST00000230449.9	4456	28	35	14436	4	-14436	5prime_fragment	FALSE	canonical	2	371	junction_13	61.0743140251971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATGTAAATTTGATTA	8	True	NA	NA	False	AAAAAG	-7	NA	693104	499589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_79079.known	chr6	-	536	3	FSM	ENSG00000112685.14	ENST00000475028.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTTCTTTATGGCT	4	True	NA	NA	False	NA	NA	NA	693108	679142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_679515_689138_689213_693018
transcript_79080.nnic	chr6	-	2125	8	NNC	ENSG00000112699.11	novel	520	4	NA	NA	439	21036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	136.996052378698	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGTGACTAATATCCTG	518	False	NA	NA	False	AATAAA	-20	NA	2245166	1909070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_1909988_1930102_1930231_1959866_1959972_1960773_1960967_2115770_2115881_2117468_2117557_2124686_2124732_2244627
transcript_79081.nic	chr6	-	1440	3	NIC	ENSG00000164385.10	novel	649	2	NA	NA	-10	701	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTCCCTGAAAGTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	2634629	2632216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_2633404_2633604_2633793_2634564
transcript_79086.known	chr6	-	2476	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_5	9.91071249821234	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCAGGCCTCTTC	-1	True	NA	-1	True	AATAAA	-24	NA	2841863	2832331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
transcript_79097.known	chr6	-	1786	2	FSM	ENSG00000230438.8	ENST00000670540.2	1804	2	0	18	0	-18	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTCAAAGTTCCCTAATG	9873	False	NA	NA	False	NA	NA	NA	2876607	2854219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2855691_2876292
transcript_79098.known	chr6	-	4143	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_3	151.891865775916	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTAGATTTTCCCTT	0	True	NA	-7	True	AATAAA	-24	NA	2903309	2887269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_79099.known	chr6	-	2036	8	FSM	ENSG00000124570.21	ENST00000616722.4	2036	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	201.956451155355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGCATTCACTCCGTGT	79	False	NA	-22	True	AATAAA	-16	NA	2972165	2948170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2968778_2968914_2971532
transcript_7910.known	chr1	+	3739	9	FSM	ENSG00000162706.13	ENST00000368125.9	3739	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTGTTCACTTCCT	0	True	NA	3	True	AATATA	-14	NA	159171614	159203313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159171854_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_79104.known	chr6	-	1495	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	165.58826112446	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	19	True	NA	-10	True	AATAAA	-28	NA	2962108	2948158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
transcript_79105.known	chr6	-	1638	7	FSM	ENSG00000124570.21	ENST00000643098.1	1638	7	0	0	0	0	multi-exon	FALSE	canonical	2	106	junction_6	136.435169789741	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-3	True	NA	-10	True	AATAAA	-28	NA	2971605	2948158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971247
transcript_79106.known	chr6	-	1375	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_6	154.266454191729	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	659	False	NA	-10	True	AATAAA	-28	NA	2971585	2948158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
transcript_79107.known	chr6	-	1315	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	0	0	0	0	multi-exon	FALSE	canonical	2	114	junction_6	133.667497919277	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	1	True	NA	-10	True	AATAAA	-28	NA	2971567	2948158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
transcript_79108.known	chr6	-	1313	7	FSM	ENSG00000124570.21	ENST00000380520.6	1313	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	173.775717521177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATAAAGGGCCCATTT	-4	True	NA	-47	True	NA	NA	NA	2971661	2948195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971591
transcript_79116.known	chr6	+	1508	10	FSM	ENSG00000124588.22	ENST00000338130.7	1508	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	530.276401255416	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	3	True	NA	15	True	AATAAA	-16	NA	2999973	3019755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3002049_3002287_3003668_3003790_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_7912.known	chr1	+	729	3	FSM	ENSG00000158716.9	ENST00000368109.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	391	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	-26	True	NA	29	True	AATAAA	-19	NA	159780931	159782543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159781001_159781098_159781368_159782152
transcript_79121.nnic	chr6	+	1101	8	NIC	ENSG00000124588.22	novel	626	6	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	482.079085729675	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	7510	False	NA	15	True	AATAAA	-16	NA	2987934	3019755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_2988032_2993930_2994054_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_7913.known	chr1	+	694	3	FSM	ENSG00000158716.9	ENST00000368108.7	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	290	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	2	True	NA	29	True	AATAAA	-19	NA	159780959	159782543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159780994_159781098_159781368_159782152
transcript_79132.nnic	chr6	+	1229	7	NNC	ENSG00000124588.22	novel	1073	7	NA	NA	-65	-1195	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_6	385.63353358107	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATAGTGGTGTGTGGG	-25	True	NA	NA	False	AATAAA	-28	NA	2999828	3018560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3018192
transcript_79133.known	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	106.564534438058	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	0	True	NA	15	True	AATAAA	-16	NA	2999893	3019755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_79135.known	chr6	+	1021	7	FSM	ENSG00000124588.22	ENST00000380441.5	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	535.61636353727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	-1	True	NA	15	True	AATAAA	-16	NA	2999988	3019755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_79139.known	chr6	+	851	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_4	352.902026063892	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	12	False	NA	15	True	AATAAA	-16	NA	3000001	3019755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_7914.known	chr1	+	797	2	FSM	ENSG00000158716.9	ENST00000368107.2	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	4	True	NA	29	True	AATAAA	-19	NA	159780961	159782543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_159781368_159782152
transcript_79141.nnic	chr6	+	973	6	NIC	ENSG00000124588.22	novel	1073	7	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_2	404.45538690936	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	-25	True	NA	15	True	AATAAA	-16	NA	2999828	3019755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_3000086_3006467_3006560_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_7915.known	chr1	-	1844	12	FSM	ENSG00000213085.10	ENST00000368099.9	1844	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.36666330712481	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGCTTGGCTTTCTTG	-16	True	NA	NA	False	ATTAAA	-16	NA	159900165	159872363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_159872564_159872943_159873169_159876555_159876750_159877348_159877463_159880553_159880701_159884435_159884566_159886510_159886690_159887840_159888012_159888351_159888497_159890479_159890623_159893179_159893306_159900095
transcript_79150.known	chr6	+	1573	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	4	True	NA	23	True	AATAAA	-23	NA	2988647	2991173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_2988710_2989527_2989734_2989868
transcript_79154.known	chr6	-	417	2	FSM	ENSG00000224846.3	ENST00000456189.2	417	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTCTCACAAGCTAAGT	427	False	NA	-11	True	ATTAAA	-23	NA	2998743	2989721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2990012_2998616
transcript_79155.known	chr6	-	408	2	FSM	ENSG00000224846.3	ENST00000429319.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGCTCTCACAAGCT	36	False	NA	-15	True	ATTAAA	-19	NA	2999134	2989725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_2990012_2999012
transcript_7916.nnic	chr1	-	1860	12	Fusion	ENSG00000158710.15_ENSG00000213085.10	novel	1844	12	NA	NA	-28	0	multi-exon	FALSE	canonical	0	0	junction_1	1.30479091767339	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGCTTGGCTTTCTTG	4008	False	NA	NA	False	ATTAAA	-16	NA	159925535	159872363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_-_159872564_159872943_159873169_159876555_159876750_159877348_159877463_159880553_159880701_159884435_159884566_159886510_159886690_159887840_159888012_159888351_159888497_159890479_159890623_159893179_159893306_159925449
transcript_79162.known	chr6	+	1186	8	FSM	ENSG00000137274.13	ENST00000434640.5	1186	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	112.767414601552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCACACTCCAGTCTTG	NA	False	NA	-75	True	NA	NA	NA	3118373	3152575	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3118563_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_79169.known	chr6	+	1563	8	FSM	ENSG00000137274.13	ENST00000424847.6	1563	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	108.866516281853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTACCCCTCCCTTCA	NA	False	NA	19	True	NA	NA	NA	3118375	3152669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3118848_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_79173.nnic	chr6	+	1385	7	NIC	ENSG00000137274.13	novel	1063	8	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	2	45	junction_5	84.2939631422217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAAGCCTCTAACTTC	NA	False	NA	2	True	AATAAA	-22	NA	3118647	3153062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137423_3140385_3140510_3152487
transcript_79174.known	chr6	+	1909	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	26.4428104070317	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	-8	True	NA	NA	False	AATAAA	-3	NA	3118710	3153578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_79184.known	chr6	-	1616	4	FSM	ENSG00000137267.7	ENST00000333628.4	1616	4	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_2	26.5371856499935	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-1	True	NA	-5	True	AATAAA	-18	NA	3157544	3153665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3157406
transcript_79186.known	chr6	-	2284	3	FSM	ENSG00000137267.7	ENST00000680036.1	2284	3	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTATACTAATAAAAAAG	-1	True	NA	-38	True	NA	NA	NA	3157544	3153698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3155736_3156043_3156153_3157406
transcript_79187.known	chr6	-	1620	3	FSM	ENSG00000230269.7	ENST00000425384.7	1620	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	3195784	3182629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3183727_3190826_3191231_3195665
transcript_79188.known	chr6	+	629	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	276.058367419324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	-11	True	NA	15	True	AATAAA	-15	NA	3258951	3267781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
transcript_79190.known	chr6	-	1922	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	2236	junction_3	65.5591336123351	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTACTTGAAAGCACAGT	-2	True	NA	-18	True	AATAAA	-16	NA	3227653	3224276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
transcript_79192.known	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	44.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	-16	True	NA	NA	False	ATTAAA	-17	NA	3258946	3268049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3259197_3263683_3263760_3267590
transcript_79196.known	chr6	+	1643	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	-1	True	NA	8	True	AATAAA	-18	NA	3849372	3851317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_3849487_3849788
transcript_79199.known	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	28.8008644994967	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	-7	True	NA	15	True	AATAAA	-19	NA	4021299	4064983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
transcript_7920.known	chr1	-	1375	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	79.192802703276	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTCTGGCTGTGTCTGG	-2	True	NA	-9	True	AATAAA	-19	NA	159925507	159918110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
transcript_79200.known	chr6	-	1451	11	FSM	ENSG00000198721.13	ENST00000496241.6	1451	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	287.997934020368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCACACAGGTGTTTGG	5	True	NA	-12	True	AATAAA	-23	NA	4135591	4115699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130178_4130250_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_79205.known	chr6	-	1380	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_9	131.889216511809	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-1	True	NA	-18	True	AATAAA	-17	NA	4135597	4115705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_79207.known	chr6	-	2122	9	FSM	ENSG00000198721.13	ENST00000464057.5	2122	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_8	136.707717412003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-11	True	NA	-18	True	AATAAA	-17	NA	4135575	4115705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_79209.nnic	chr6	-	1306	9	NIC	ENSG00000198721.13	novel	1380	10	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	233.336633161191	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	13	False	NA	-18	True	AATAAA	-17	NA	4135613	4115705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_79216.known	chr6	-	558	4	FSM	ENSG00000198721.13	ENST00000489086.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	210.02275009045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACAAAAGCTGTAGAG	-9	True	NA	NA	False	NA	NA	NA	4135573	4130317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4130561_4130766_4130866_4133548_4133702_4135510
transcript_79220.nic	chr6	+	1043	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-68	32649	-68	-11893	5prime_fragment	FALSE	canonical	3	359	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGGAAAAAATCCCCAAT	-7	True	NA	29	True	AGTAAA	-7	NA	4021198	4032333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_4021467_4031558
transcript_79222.known	chr6	-	1368	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_9	109.592285932006	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-11	True	NA	-18	True	AATAAA	-17	NA	4135575	4115705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_79223.known	chr6	-	1133	8	FSM	ENSG00000198721.13	ENST00000478266.6	1133	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	261.49835134299	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	0	True	NA	-18	True	AATAAA	-17	NA	4135564	4115705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_79224.known	chr6	-	1405	10	FSM	ENSG00000198721.13	ENST00000380125.6	1405	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	226.886168228328	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTTTGGTAGTAGA	158	False	NA	-5	True	AATAAA	-30	NA	4135468	4115692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135369
transcript_79226.nic	chr6	+	2024	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-4	-116	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTCCAAACGTCATTAT	NA	False	NA	27	True	AATAAA	-15	NA	4772966	4954257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_79227.nic	chr6	+	3311	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	NA	False	NA	18	True	AATAAA	-20	NA	4772966	4955544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_79229.nnic	chr6	+	3182	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	96.5809965204796	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	0	True	NA	18	True	AATAAA	-20	NA	4773029	4955544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_4773179_4891712_4892380_4935580_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_79232.nic	chr6	+	1514	5	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	14.0423466699836	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGTTTGGTTATTGTTT	0	True	NA	NA	False	AAAAAG	-26	NA	4773029	4943813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545
transcript_79234.nic	chr6	+	963	3	NIC	ENSG00000153046.18	novel	773	2	NA	NA	-4	-7999	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	16	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTTATTGACGACAGA	NA	False	NA	NA	False	NA	NA	NA	4772966	4935598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_4773179_4891712_4892380_4935514
transcript_79235.known	chr6	+	773	2	FSM	ENSG00000153046.18	ENST00000483019.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACAGGCTTAGCTG	11	False	NA	-32	True	NA	NA	NA	4773040	4892347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_4773179_4891712
transcript_79237.known	chr6	-	1042	8	FSM	ENSG00000124787.14	ENST00000464646.1	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	78.171449456973	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAAATCG	372	False	NA	-37	True	NA	NA	NA	5003658	4995077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003585
transcript_79238.known	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	36.4876272012241	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-7	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_7924.known	chr1	-	1603	5	FSM	ENSG00000158710.15	ENST00000368096.5	1603	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	341.928720642183	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGTGTCTGGGGCC	5826	False	NA	-5	True	AATAAA	-23	NA	159923717	159918106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159923435
transcript_79241.known	chr6	-	1088	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	78.1039193781095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	-6	True	NA	-6	True	AATAAA	-24	NA	5004036	4995046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
transcript_79243.known	chr6	-	1056	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	79.2520592091391	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACGCTTGCTTTCAG	NA	False	NA	-8	True	AATAAA	-22	NA	5004063	4995048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_79244.nic	chr6	-	989	6	NIC	ENSG00000124787.14	novel	1056	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	105.152080340809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	NA	False	NA	-6	True	AATAAA	-24	NA	5004063	4995046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5002100_5002246_5003879
transcript_79246.known	chr6	+	1732	3	FSM	ENSG00000272142.4	ENST00000671039.1	1732	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCCTCTCGCTCTGCCT	NA	False	NA	NA	False	AAAAAG	-14	NA	5003777	5043962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_5003960_5021380_5021474_5042505
transcript_79249.known	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	33.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-10	True	NA	-13	True	AATAAA	-22	NA	5260950	5108418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_5109492_5216617_5216739_5260647
transcript_79251.known	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	2	True	NA	-1	True	AATAAA	-17	NA	5260737	5186599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_5186981_5216617_5216739_5260647
transcript_79252.nic	chr6	-	1989	2	ISM	ENSG00000214113.11	ENST00000500576.4	592	3	-200	28440	13	21244	5prime_fragment	FALSE	canonical	3	717	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAACTGGCCCTCATCT	3	True	NA	NA	False	NA	NA	NA	5260937	5215039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_5216739_5260647
transcript_79254.known	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	13.8764388643324	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	-17	True	NA	19	True	AATAAA	-20	NA	5261512	5771583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_79259.known	chr6	-	1582	3	FSM	ENSG00000124785.9	ENST00000244766.7	1582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTGTCGTTTGTTTCC	-12	True	NA	1	True	AATAAA	-16	NA	6006925	5997998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_5999205_6002352_6002498_6006694
transcript_7926.known	chr1	-	7038	1	FSM	ENSG00000143315.8	ENST00000368090.5	7038	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGGACAGATTATTCAG	-17	True	NA	NA	False	AATAAA	-18	NA	160031990	160024952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160025000_160032000
transcript_79260.known	chr6	-	631	3	FSM	ENSG00000124491.16	ENST00000451619.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGCTTAACTAAATTA	19	False	NA	NA	False	AATAAA	-17	NA	6320642	6305112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_6305540_6318534_6318683_6320586
transcript_79261.known	chr6	-	3828	15	FSM	ENSG00000124491.16	ENST00000264870.8	3828	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.3956755211442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATCTGTGCAGAAGTG	-1	True	NA	NA	False	AATAAA	-16	NA	6320662	6144083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_6145773_6151812_6151950_6167457_6167619_6174579_6174868_6181987_6182142_6195796_6195886_6197222_6197327_6222032_6222172_6224685_6224861_6248311_6248420_6250810_6250930_6266557_6266810_6305350_6305540_6318534_6318683_6320586
transcript_79263.known	chr6	-	1640	10	FSM	ENSG00000124783.14	ENST00000650389.1	1640	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	310.384627976243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGGCCGAGCAGTGC	-34	True	NA	NA	False	NA	NA	NA	7313220	7268532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7269155_7287861_7287923_7289867_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_79264.known	chr6	-	1808	10	FSM	ENSG00000124783.14	ENST00000474597.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	347.56262425321	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGAATCTCTTGCTG	-21	True	NA	NA	False	AATAAA	-22	NA	7313207	7268305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7269155_7289867_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_79266.known	chr6	-	3248	9	FSM	ENSG00000124783.14	ENST00000397511.6	3248	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.643800461007	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTATAGCTTCCTC	-12	True	NA	-11	True	CATAAA	-14	NA	7313198	7287569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_79270.known	chr6	-	9661	8	FSM	ENSG00000124783.14	ENST00000244763.9	9661	8	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_7	35.4550592227653	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTGCAACATGAAATG	-13	True	NA	-31	True	ATTAAA	-17	NA	7313199	7281142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_79277.known	chr6	-	1893	8	FSM	ENSG00000124783.14	ENST00000489567.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	260.018680647592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGTAAAATAGTATGAA	12	True	NA	-50	True	NA	NA	NA	7313174	7288681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301369_7303549_7303638_7309916_7310030_7313041
transcript_7928.known	chr1	-	2366	7	FSM	ENSG00000162729.14	ENST00000368086.5	2366	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	150.97755535914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGGCTGTGTCTTCCCT	176	False	NA	NA	False	AATAAA	-19	NA	160098689	160091339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160091632_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_79284.known	chr6	-	1118	8	FSM	ENSG00000124783.14	ENST00000479365.5	1118	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	260.878108999398	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTTTTTTAAACC	4	True	NA	-58	True	NA	NA	NA	7313182	7289675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7289932_7295384_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_7929.known	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	55.6856255140309	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-8	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_79298.known	chr6	+	2498	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	42.0520046341432	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	-21	True	NA	17	True	CATAAA	-17	NA	7389807	7418037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
transcript_79309.nic	chr6	+	1819	16	ISM	ENSG00000124784.9	ENST00000379834.7	2498	17	-28	3647	-13	2823	5prime_fragment	TRUE	canonical	3	275	junction_3	43.0169992238211	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAATGAAATACCTTC	-49	True	NA	NA	False	GATAAA	-4	NA	7389779	7414390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237
transcript_79318.nnic	chr6	-	859	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	143	-91	143	82	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTGGGGGGGACTTTCT	-7	True	NA	82	True	AATAAA	-24	NA	7542938	7540362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7541054_7542770
transcript_79319.nnic	chr6	-	726	2	NNC	ENSG00000261189.2	novel	911	2	NA	NA	652	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	654	False	NA	-9	True	AATAAA	-18	NA	7542429	7540453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_7541054_7542303
transcript_79320.nnic	chr6	-	947	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	-36	0	-36	0	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	NA	False	NA	-9	True	AATAAA	-18	NA	7543117	7540453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7541054_7542770
transcript_79321.known	chr6	+	457	2	FSM	ENSG00000096696.15	ENST00000683682.1	457	2	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGATACTTTCCCTTC	321	False	NA	NA	False	AATAAA	-21	NA	7542020	7556109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_7542086_7555717
transcript_79323.known	chr6	+	4174	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	8.45576726264388	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	5	True	NA	15	True	ATTAAA	-22	NA	7590197	7611967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
transcript_79332.nic	chr6	+	2648	8	NIC	ENSG00000168566.13	novel	4174	9	NA	NA	-3	725	intron_retention	FALSE	canonical	3	14	junction_4	34.5909036054986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAAAGATAAGGATAAA	2	True	NA	-14	True	CATAAA	-8	NA	7590194	7606146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7599672_7601525_7602622_7602745_7605397_7605487_7606030
transcript_79336.nnic	chr6	-	2186	4	NIC	ENSG00000188428.20	novel	2659	5	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	131.423826691442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTTTTT	-13	True	NA	NA	False	ATTAAA	-20	NA	8064389	8013980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_8015829_8041138_8041269_8062533_8062617_8064264
transcript_79337.known	chr6	-	1301	10	FSM	ENSG00000239264.9	ENST00000473453.2	1301	10	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_9	265.196828836039	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGTTGGAGGTCACC	1366	False	NA	NA	False	NA	NA	NA	7910077	7883143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7909812
transcript_79342.known	chr6	-	2445	6	FSM	ENSG00000188428.20	ENST00000244777.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	126.339859110259	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTTTTTCAA	-17	True	NA	NA	False	ATTAAA	-23	NA	8064393	8013977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8015829_8026366_8026426_8027206_8027400_8041138_8041269_8062533_8062617_8064264
transcript_79345.known	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	43.8940485715319	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-13	True	NA	-3	True	AATAAA	-13	NA	8064389	8013566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_79359.known	chr6	-	368	4	FSM	ENSG00000188428.20	ENST00000543936.7	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	130.233977474732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGCCATGGAAAGGCT	-9	True	NA	NA	False	NA	NA	NA	8064385	8015723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8015829_8026366_8026426_8062533_8062617_8064264
transcript_79361.known	chr6	-	562	4	FSM	ENSG00000124802.12	ENST00000429723.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	881.684876938593	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATCAGTTTTTAC	-2	True	NA	2	True	CATAAA	-16	NA	8102548	8073359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8073511_8090185_8090282_8097266_8097468_8102434
transcript_79362.known	chr6	-	591	4	FSM	ENSG00000124802.12	ENST00000502429.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	852.705628507804	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATTATTTTGAATTTT	141	False	NA	NA	False	NA	NA	NA	8102481	8078493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8078741_8090185_8090282_8097266_8097468_8102434
transcript_79363.known	chr6	-	1047	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	1504	junction_1	207.25346800476	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCGTTGTTTCTTTCT	-2	True	NA	-3	True	AGTAAA	-17	NA	8102548	8079394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
transcript_7937.nic	chr1	+	1552	3	ISM	ENSG00000018625.15	ENST00000472488.5	3114	20	-88	14767	-88	1160	5prime_fragment	FALSE	canonical	3	44	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGGTCCCTGCTTTAAA	NA	False	NA	NA	False	ATTAAA	-30	NA	160115670	160122435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_160115874_160120905_160121011_160121191
transcript_79372.known	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_2	138	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-13	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8090282_8097266_8097468_8102434
transcript_79378.known	chr6	-	2137	11	FSM	ENSG00000124786.12	ENST00000379660.4	2137	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	28.4887697172061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	15	True	NA	-1	True	AATAAA	-24	NA	8435483	8413067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435076
transcript_7938.known	chr1	+	1878	11	FSM	ENSG00000143318.13	ENST00000368078.8	1878	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.41774468787578	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATTTTGGTGAAGT	-15	True	NA	NA	False	AATAAA	-21	NA	160190574	160201886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160191031_160192801_160192887_160193746_160193848_160195011_160195124_160195460_160195535_160195896_160196028_160197568_160197615_160198676_160198732_160198952_160199054_160199850_160199926_160201244
transcript_79380.known	chr6	-	3566	11	FSM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_6	13.1030530793399	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTCTACACTTTCCT	4	True	NA	NA	False	TATAAA	-21	NA	8435545	8411434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_79381.nnic	chr6	-	1853	11	NNC	ENSG00000124786.12	novel	2200	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_10	24.3	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-12	True	NA	-1	True	AATAAA	-24	NA	8435561	8413067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435438
transcript_79384.known	chr6	-	1911	10	FSM	ENSG00000124786.12	ENST00000648987.1	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	25.0599281722833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGGCTGACAAGTGAG	707	False	NA	NA	False	NA	NA	NA	8435271	8412884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435227
transcript_79385.nic	chr6	-	1903	10	NIC	ENSG00000124786.12	novel	2200	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	17.3319087733693	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-12	True	NA	-1	True	AATAAA	-24	NA	8435561	8413067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
transcript_79386.nnic	chr6	-	1813	10	NNC	ENSG00000124786.12	novel	2137	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	22.3959872949058	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-18	True	NA	-1	True	AATAAA	-24	NA	8435567	8413067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435438
transcript_79388.nnic	chr6	-	1800	10	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	27.264140062238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-18	True	NA	-1	True	AATAAA	-24	NA	8435567	8413067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_79397.nnic	chr6	-	2344	5	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	26	-11937	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	43.2051790876973	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGAATTTATTTCTG	-13	True	NA	NA	False	AATAAA	-19	NA	8435511	8425010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_8426724_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_79399.nnic	chr6	-	2348	4	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	0	-11937	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	46.0724067817893	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGAATTTATTTCTG	-12	True	NA	NA	False	AATAAA	-19	NA	8435561	8425010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_8426724_8427936_8428059_8429863_8430158_8435342
transcript_79402.nic	chr6	-	1464	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	75	17433	13	-15794	5prime_fragment	FALSE	canonical	3	79	junction_2	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATATTCCACTAGTAGGT	508	False	NA	NA	False	ATTAAA	-21	NA	8435470	8428867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_8430158_8434384_8434431_8435342
transcript_79404.nic	chr6	-	947	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	-22	18047	-6	-16408	5prime_fragment	FALSE	canonical	3	79	junction_2	11.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGGATATTTTATGG	-18	True	NA	-14	True	AATAAA	-19	NA	8435567	8429481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_8430158_8434384_8434431_8435342
transcript_79408.known	chr6	+	1368	3	FSM	ENSG00000285219.3	ENST00000646488.1	1368	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAGTAATGATATCA	4	True	NA	NA	False	AATAAA	-16	NA	8435637	8470725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_8436179_8437939_8438032_8469990
transcript_79409.known	chr6	+	1623	3	FSM	ENSG00000285219.3	ENST00000644038.1	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTTTTGTGATTTT	6	True	NA	NA	False	AATAAA	-24	NA	8435639	8471005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_8436179_8437962_8438032_8469990
transcript_79411.known	chr6	+	1108	5	FSM	ENSG00000111846.20	ENST00000397423.7	1108	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	111.194649151836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGTAGATAATACTGT	21	False	NA	NA	False	AGTAAA	-5	NA	10521331	10626947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10521418_10527473_10527661_10528630_10528842_10621350_10621444_10626416
transcript_79413.known	chr6	+	4579	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_1	65	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	-5	True	NA	12	True	AATAAA	-19	NA	10555808	10629368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10557343_10621350_10621444_10626416
transcript_79415.known	chr6	+	4200	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	66	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	-2	True	NA	12	True	AATAAA	-19	NA	10585759	10629368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10586915_10621350_10621444_10626416
transcript_7942.known	chr1	+	1021	4	FSM	ENSG00000162734.13	ENST00000368077.5	1021	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	198.488174850684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCATGGGCCTAGCAT	-11	True	NA	NA	False	NA	NA	NA	160205379	160214035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160205523_160211542_160211651_160213109_160213266_160213421
transcript_79420.known	chr6	-	541	5	FSM	ENSG00000137434.12	ENST00000460742.6	541	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.28010988928052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCGTCTTTTGTTTTG	80	False	NA	2	True	ATTAAA	-21	NA	10694533	10671417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_10671599_10683186_10683233_10684848_10684924_10686965_10687165_10694493
transcript_79422.nic	chr6	-	534	4	NIC	ENSG00000137434.12	novel	627	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	8	True	NA	-2	True	ATTAAA	-17	NA	10694605	10671421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_10671599_10683186_10683233_10686965_10687165_10694493
transcript_79429.known	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	51.4186400365653	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	24	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_7943.known	chr1	+	2420	4	FSM	ENSG00000162734.13	ENST00000360472.9	2420	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	20.0055547841649	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	-7	True	NA	40	True	AATAAA	-21	NA	160205383	160215372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160205523_160211542_160211717_160213109_160213266_160213421
transcript_79434.nnic	chr6	+	1409	9	NIC	ENSG00000111845.5	novel	1523	10	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	242.513627194432	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	-25	True	NA	29	True	TATAAA	-23	NA	10694922	10709782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10695070_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_79438.known	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	89.824272888791	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	-40	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_79440.known	chr6	+	1177	6	FSM	ENSG00000111843.14	ENST00000541412.5	1177	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	406.059897059535	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	1340	False	NA	NA	False	AATAAA	-8	NA	10722914	10731119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10724555_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_79446.known	chr6	+	899	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	438.979142443009	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	15	True	NA	NA	False	AATAAA	-18	NA	10723124	10731129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_79447.known	chr6	+	472	4	FSM	ENSG00000111843.14	ENST00000466421.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	482.718229290016	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	-1	True	NA	NA	False	AATATA	-30	NA	10723108	10730763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10723242_10725906_10726009_10728639_10728728_10730614
transcript_79449.known	chr6	-	1150	2	FSM	ENSG00000272097.2	ENST00000659819.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATCTATACTTAACTT	NA	False	NA	NA	False	AATAAA	-25	NA	10747619	10743323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_10744315_10747460
transcript_79458.known	chr6	+	752	7	FSM	ENSG00000137210.14	ENST00000473166.5	752	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	651.525901250288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTCTTATTTTAAATCA	0	True	NA	11	True	AATAAA	-3	NA	10747758	10829186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10826563_10826613_10827696_10827825_10829006
transcript_79461.known	chr6	+	929	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_5	116.286886620977	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	-8	True	NA	NA	False	AATAAA	-18	NA	10747804	10756981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_7947.known	chr1	-	3867	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	213.897752491021	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	3	True	NA	-9	True	AGTAAA	-17	NA	160262549	160215719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
transcript_79477.known	chr6	+	992	5	FSM	ENSG00000137210.14	ENST00000475942.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_4	113.510737377571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCGGTGGTGCACGCCT	-8	True	NA	NA	False	AATACA	-11	NA	10747804	10755810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141
transcript_7948.known	chr1	-	4106	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_13	209.176039222028	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	16	True	NA	-4	True	AGTAAA	-22	NA	160262451	160215714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
transcript_79481.known	chr6	+	787	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	541.36280579663	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	-2	True	NA	NA	False	NA	NA	NA	10747810	10756947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
transcript_79483.known	chr6	+	559	5	FSM	ENSG00000137210.14	ENST00000473807.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	682.43621496811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCTCCTGCCTGGGCT	-12	True	NA	NA	False	NA	NA	NA	10747800	10802536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10802330
transcript_79484.known	chr6	+	502	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	659.874372513435	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	-2	True	NA	-10	True	NA	NA	NA	10747810	10829165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
transcript_79489.known	chr6	+	888	5	FSM	ENSG00000137210.14	ENST00000612333.4	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	527.705114149939	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	0	True	NA	NA	False	AATAAA	-8	NA	10747758	10756971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10751132_10751235_10755141_10755233_10756466
transcript_7949.known	chr1	-	3972	14	FSM	ENSG00000132716.19	ENST00000326837.6	3972	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	214.504492994419	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-9	True	NA	-4	True	AGTAAA	-22	NA	160262476	160215714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
transcript_79495.known	chr6	+	730	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	571.104388200811	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	4	True	NA	NA	False	AATAAA	-10	NA	10747816	10756973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
transcript_79501.nnic	chr6	+	462	3	NIC	ENSG00000137210.14	novel	502	5	NA	NA	-10	2	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	24.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTTGCAGGTATTTTG	NA	False	NA	32	True	AATAAA	-24	NA	10747748	10829207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_79503.nnic	chr6	+	670	3	NIC	ENSG00000137210.14	novel	929	6	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	-19	True	NA	NA	False	AATAAA	-18	NA	10747793	10756981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10749201_10749269_10756466
transcript_79504.nnic	chr6	+	626	2	NIC	ENSG00000137210.14	novel	929	6	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	12	False	NA	NA	False	AATAAA	-18	NA	10747770	10756981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10756466
transcript_79505.nnic	chr6	+	418	3	NIC	ENSG00000137210.14	novel	374	3	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	24.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	-24	True	NA	28	True	AATAAA	-20	NA	10747788	10829203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_79507.known	chr6	-	3988	8	FSM	ENSG00000197977.4	ENST00000354666.4	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.1398385850373	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGCGAGTTTTATT	7	True	NA	NA	False	AATAAA	-18	NA	11044305	10980758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_10983907_10989702_10989838_10990317_10990443_10995006_10995179_11000086_11000165_11005371_11005560_11010745_11010810_11044227
transcript_79509.known	chr6	+	4887	2	FSM	ENSG00000224531.6	ENST00000416247.4	4887	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTATGTGTCTCTGG	31	True	NA	NA	False	AATAAA	-16	NA	11093833	11138733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_11094390_11134402
transcript_79511.known	chr6	-	4522	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	5.78551831923659	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTTTCTTTTTC	3	True	NA	-3	True	ATTAAA	-23	NA	11232668	11183297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
transcript_79512.known	chr6	+	579	4	FSM	ENSG00000095951.17	ENST00000491710.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTCAAAATCTGAAGAAT	-7	True	NA	NA	False	NA	NA	NA	12008761	12120157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_12008876_12015525_12015669_12089183_12089238_12119889
transcript_79513.known	chr6	+	585	4	FSM	ENSG00000095951.17	ENST00000487103.5	585	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.2659863237109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTAGATGGAGATCCGAA	25	True	NA	NA	False	NA	NA	NA	12011999	12120222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889
transcript_79514.known	chr6	+	2035	5	FSM	ENSG00000078401.7	ENST00000379375.6	2035	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGGAATCATTACTG	0	True	NA	NA	False	AATAAA	-20	NA	12290360	12297194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_12290694_12292340_12292510_12293940_12294097_12294260_12294405_12295961
transcript_79516.known	chr6	+	615	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGTAAAGTCTGTAAAA	42	False	NA	NA	False	NA	NA	NA	12514109	12514724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_12514100_12514700
transcript_79517.known	chr6	+	3045	13	FSM	ENSG00000112137.19	ENST00000675203.2	3045	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.94061961926055	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGTCCAGTGTCAT	-2	True	NA	NA	False	NA	NA	NA	13013553	13287837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13014140_13053364_13053530_13160203_13160285_13182518_13182687_13184798_13185006_13205814_13206137_13227815_13228064_13230036_13230194_13272859_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
transcript_79519.known	chr6	-	1282	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	292.831915289719	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-15	True	NA	-21	True	AATAAA	-16	NA	13328537	13304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_79520.nic	chr6	-	1251	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	286.489804641047	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-4	True	NA	-21	True	AATAAA	-16	NA	13328526	13304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
transcript_79521.known	chr6	-	1116	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	246.221403602199	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-9	True	NA	-21	True	AATAAA	-16	NA	13328531	13304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_79522.nic	chr6	-	1319	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	307.451140966549	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	5	True	NA	-21	True	AATAAA	-16	NA	13328517	13304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328295
transcript_79523.nnic	chr6	-	1296	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	303.088321471225	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	8	True	NA	-21	True	AATAAA	-16	NA	13328514	13304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
transcript_79524.nic	chr6	-	1192	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	294.053306287781	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-28	True	NA	-21	True	AATAAA	-16	NA	13328550	13304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
transcript_79526.nic	chr6	-	1170	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	309.119583117386	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-4	True	NA	-21	True	AATAAA	-16	NA	13328526	13304950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328315
transcript_79527.known	chr6	-	1084	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	281.490921503499	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	NA	False	NA	-24	True	AATAAA	-13	NA	13328583	13304953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
transcript_79529.known	chr6	-	1027	7	FSM	ENSG00000145979.18	ENST00000343141.8	1027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	289.738196001532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	NA	False	NA	-24	True	AATAAA	-13	NA	13328583	13304953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_79532.known	chr6	-	473	1	FSM	ENSG00000272379.1	ENST00000606393.1	473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCGTCACATTGTTTGG	NA	False	NA	-5	True	AATAAA	-20	NA	13290490	13290017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13290000_13290500
transcript_79533.known	chr6	+	3900	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	48.3988062295388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574226	13614558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_79538.known	chr6	+	2339	10	FSM	ENSG00000124523.17	ENST00000379262.8	2339	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	47.7912125813941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTTTTGACTGTTA	8	True	NA	9	True	AATAAA	-24	NA	13574600	13605739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13604475
transcript_79539.nic	chr6	+	1397	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-5	-188	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGGTATCTTTGATGTG	-4	True	NA	11	True	NA	NA	NA	13574588	13612099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_79540.nic	chr6	+	1500	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-12	-114	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATTCTGATTATATTT	253	False	NA	6	True	NA	NA	NA	13574559	13612173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_79541.nic	chr6	+	1698	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAATTTATTGTATAAA	169	False	NA	6	True	AATAAA	-15	NA	13574475	13612287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_79542.known	chr6	+	4564	10	FSM	ENSG00000124523.17	ENST00000606117.2	4564	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	47.8178126839418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	8	True	NA	NA	False	NA	NA	NA	13574600	13615158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574745_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_79546.known	chr6	+	4370	9	FSM	ENSG00000124523.17	ENST00000681012.1	4370	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	67.5387620185624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	NA	False	NA	NA	False	NA	NA	NA	13574232	13615158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13600833_13600950_13611789
transcript_79547.known	chr6	+	3401	9	FSM	ENSG00000124523.17	ENST00000680852.1	3401	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	19.2933764541098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGACTCCGTCTCAA	-9	True	NA	NA	False	NA	NA	NA	13574583	13603258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833
transcript_79554.known	chr6	-	1045	1	FSM	ENSG00000261071.1	ENST00000566170.1	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATCTTACACATATATT	35	False	NA	-15	True	AATAAA	-16	NA	13615155	13614110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_13614100_13615200
transcript_79556.nnic	chr6	-	2593	14	NNC	ENSG00000010017.13	novel	3384	14	NA	NA	997	0	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_13	24.568946580891	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGTCAATTGAGTTTA	-9	True	NA	-1	True	ATTAAA	-17	NA	13710838	13621497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_13622493_13625652_13625765_13632369_13632522_13634430_13634553_13637807_13637956_13639562_13639754_13641198_13641308_13642478_13642592_13644544_13644730_13652658_13652682_13657108_13657277_13658779_13658833_13696784_13696897_13710728
transcript_79559.known	chr6	+	1683	8	FSM	ENSG00000225921.7	ENST00000451315.7	1683	8	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_7	81.6033212609409	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGTCATCTGTAGT	-11	True	NA	52	True	AATACA	-22	NA	13615334	13621712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753
transcript_79562.known	chr6	+	3629	3	FSM	ENSG00000180537.13	ENST00000488300.6	3629	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCGGTTTTAGTTTGTT	-20	True	NA	NA	False	AATAAA	-22	NA	13924951	13980310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_13925024_13974209_13974365_13976908
transcript_79563.known	chr6	+	2328	5	FSM	ENSG00000112149.10	ENST00000379153.4	2328	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	15.3683928893037	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTGTAAACCAGTTTG	-1	True	NA	NA	False	AATAAA	-45	NA	14117771	14136906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_14117849_14117949_14118066_14131519_14131749_14133648_14133756_14135107
transcript_79577.nnic	chr6	-	412	3	NNC	ENSG00000234261.5	novel	778	4	NA	NA	-71	-7837	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	15	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	131	False	NA	NA	False	AATAAA	-21	NA	15022035	14880664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_14880802_14997415_14997476_15021820
transcript_79580.nic	chr6	-	1381	3	NIC	ENSG00000234261.5	novel	1915	5	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	10	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	131	False	NA	-4	True	AATAAA	-13	NA	15022035	14976212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_14977319_14997415_14997476_15021820
transcript_79581.nnic	chr6	-	1377	3	NNC	ENSG00000234261.5	novel	1915	5	NA	NA	-288	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	29	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	NA	False	NA	-4	True	AATAAA	-13	NA	15022252	14976212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_14977319_14997415_14997476_15022041
transcript_79582.known	chr6	+	6003	18	FSM	ENSG00000008083.14	ENST00000341776.7	6003	18	0	0	0	0	multi-exon	TRUE	canonical	3	339	junction_2	122.553201497276	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACTGAATGGAATGAGC	13	True	NA	35	True	AATAAA	-37	NA	15246068	15522042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_15246585_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_79586.nic	chr6	+	1718	3	ISM	ENSG00000008083.14	ENST00000341776.7	6003	18	-94	110847	-94	-97198	5prime_fragment	FALSE	canonical	3	339	junction_2	42.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCTTGTCAGTTCATCT	-2	True	NA	NA	False	AAGAAA	-8	NA	15245974	15411195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_15246585_15374116_15374253_15410223
transcript_79587.known	chr6	-	1518	11	FSM	ENSG00000047579.20	ENST00000513680.5	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	106.572979689976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAACAGCTAACAATAAA	-40	True	NA	-48	True	NA	NA	NA	15663058	15522842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15660382_15660522_15662813
transcript_79588.known	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	TRUE	canonical	1	87	junction_2	48.9628228831974	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-10	True	NA	-12	True	AATAAA	-17	NA	15663028	15522806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_79589.known	chr6	-	1404	10	FSM	ENSG00000047579.20	ENST00000510395.5	1404	10	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_8	78.7781695649245	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	11	True	NA	-15	True	AATAAA	-14	NA	15663007	15522809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
transcript_79592.known	chr6	-	1306	9	FSM	ENSG00000047579.20	ENST00000515875.5	1306	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.6605326140305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTAACAATAAAGTGTGA	-12	True	NA	-42	True	NA	NA	NA	15663030	15522836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
transcript_79593.known	chr6	-	1880	9	FSM	ENSG00000047579.20	ENST00000338950.9	1880	9	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	50.7364513934508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTAGATTATCAAGGT	43	True	NA	NA	False	NA	NA	NA	15662975	15523562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_79594.nnic	chr6	-	644	3	Antisense	novelGene_ENSG00000214027.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGCATGAATTGAAATC	NA	False	NA	1	True	AATAAA	-15	NA	15961497	15904349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_15904596_15960935_15961020_15961183
transcript_79596.known	chr6	+	3072	7	FSM	ENSG00000007944.15	ENST00000356840.8	3072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.5277674973257	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	-1	True	NA	11	True	AATAAA	-15	NA	16129085	16148248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_79598.nic	chr6	+	757	2	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	55	17204	-30	-17204	5prime_fragment	FALSE	canonical	3	104	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACCACCCTACCCG	54	False	NA	NA	False	NA	NA	NA	16129140	16131044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_16129410_16130556
transcript_79599.nnic	chr6	+	1108	6	NNC	ENSG00000137198.10	novel	793	2	NA	NA	499	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	19.7727084639409	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGGAGTTGCTGGAGT	NA	False	NA	24	True	AATATA	-18	NA	16258471	16295544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_16258649_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_7960.nic	chr1	-	2909	13	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	-55	-106	intron_retention	FALSE	canonical	3	101	junction_12	199.810100817974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGTAATGGTGTGGAAG	NA	False	NA	-22	True	AATAAA	-17	NA	160262604	160216658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
transcript_79602.nnic	chr6	-	655	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	-23	53	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	102.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3189	False	NA	NA	False	AATAAA	-22	NA	16264576	16259047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_16259377_16262176_16262267_16264340
transcript_79604.nnic	chr6	-	1470	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	-26	53	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	101	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3186	False	NA	NA	False	AATAAA	-22	NA	16264579	16259047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_16259377_16262176_16263079_16264340
transcript_79605.nic	chr6	-	1754	3	NIC	ENSG00000282024.1	novel	1026	2	NA	NA	-34	53	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	88	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3178	False	NA	NA	False	AATAAA	-22	NA	16264587	16259047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_16259377_16262176_16263355_16264340
transcript_79606.nnic	chr6	-	2697	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	-33	53	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	103.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3179	False	NA	NA	False	AATAAA	-22	NA	16264586	16259047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_16259377_16262176_16263678_16263719
transcript_79607.known	chr6	-	1026	2	FSM	ENSG00000282024.1	ENST00000632346.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGCCCGCCTGCACCC	4839	False	NA	NA	False	TATAAA	-41	NA	16262926	16259100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_16259377_16262176
transcript_79608.known	chr6	-	568	2	FSM	ENSG00000124788.19	ENST00000479680.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCATTTTAATTGTCA	-14	True	NA	NA	False	GGGGCT	-5	NA	16761479	16752961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_16753348_16761297
transcript_7961.nic	chr1	-	3047	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	-13	-185	intron_retention	FALSE	canonical	3	108	junction_12	198.661772870374	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGGTAAAATTA	63	False	160262506	-17	True	ATTAAA	-17	NA	160262489	160216737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_79610.known	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	13.1431752463229	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	5	True	NA	16	True	AATAAA	-22	NA	17393594	17557780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_79615.known	chr6	+	1812	12	FSM	ENSG00000112186.13	ENST00000378990.6	1812	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.3114528737788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAAAACCTTTGAG	23	False	NA	NA	False	AAAAAG	-41	NA	17393644	17556795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_79618.known	chr6	+	1404	11	FSM	ENSG00000112186.13	ENST00000465994.5	1404	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	34.4802842215664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATACAGCACTGTTTC	21	True	NA	NA	False	NA	NA	NA	17393711	17556568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_79621.nic	chr6	+	644	4	ISM	ENSG00000112186.13	ENST00000476263.1	891	9	-95	75984	4	-75984	5prime_fragment	FALSE	canonical	3	102	junction_1	10.6562449087639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAAAGCAATGTG	15	False	NA	NA	False	NA	NA	NA	17393636	17463306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995
transcript_79622.known	chr6	-	6007	39	FSM	ENSG00000137177.20	ENST00000259711.11	6007	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	14.33213076619	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAGACACCCCAATTT	-8	True	NA	-16	True	ATTAAA	-17	NA	17987635	17763692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_17764947_17771113_17771219_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17789871_17789911_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
transcript_79627.nnic	chr6	-	1758	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	126.871569162395	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	1048	False	NA	0	True	ATTAAA	-24	NA	18155101	18128310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_18128802_18130251_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_79628.nnic	chr6	-	1796	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.025502312192	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	995	False	NA	0	True	ATTAAA	-24	NA	18155154	18128310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_18128802_18130266_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_7963.nic	chr1	-	2830	13	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	-55	-185	intron_retention	FALSE	canonical	3	101	junction_12	199.810100817974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGGTAAAATTA	NA	False	NA	-17	True	ATTAAA	-17	NA	160262604	160216737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
transcript_79643.nnic	chr6	-	1873	9	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-77	-1402	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	133.535341763894	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTTGGCAATTGTTG	995	False	NA	-14	True	AATAAA	-18	NA	18155154	18129712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148973_18149172_18155032
transcript_79644.known	chr6	-	3184	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_8	27.5927413462309	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-8	True	NA	0	True	ATTAAA	-24	NA	18155077	18128310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_79653.known	chr6	-	1360	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	502.057855231845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATACCAGCAAAGAG	0	True	NA	NA	False	NA	NA	NA	18264267	18225665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
transcript_79654.known	chr6	-	3142	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_10	112.952379346342	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTACATGTGAAAGTCT	-11	True	NA	-6	True	ATTAAA	-23	NA	18264530	18223859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_79660.known	chr6	-	1857	2	FSM	ENSG00000228412.9	ENST00000457670.2	1857	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCAGGTTTTTCTGT	1768	False	NA	NA	False	AATAAA	-15	NA	19804787	19802166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_19803911_19804674
transcript_79666.known	chr6	-	4325	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	6.52080005316321	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCAGTTGTTTTTTTTT	-20	True	NA	1	True	AATAAA	-42	NA	20212469	20099683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
transcript_79668.known	chr6	+	3272	16	FSM	ENSG00000145996.11	ENST00000274695.8	3272	16	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	21.7650075937399	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	-21	True	NA	23	True	AATAAA	-23	NA	20534456	21232404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21108400_21108464_21198020_21198105_21201109_21201275_21230847
transcript_79673.nic	chr6	+	3532	11	ISM	ENSG00000145996.11	ENST00000274695.8	3272	16	-10	229732	-10	-228769	5prime_fragment	FALSE	canonical	3	168	junction_5	13.6029408585056	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGATTATCACTGCCAA	-31	True	NA	NA	False	TTTAAA	-13	NA	20534446	21002672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226
transcript_79677.nnic	chr6	+	1353	5	NNC	ENSG00000145996.11	novel	1673	6	NA	NA	-10	40586	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	83.3647857311467	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTTAATAATTTATTG	-31	True	NA	NA	False	ATTAAA	-16	NA	20534446	20600258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20599368
transcript_79678.known	chr6	+	1673	6	FSM	ENSG00000145996.11	ENST00000613575.4	1673	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	94.5312646694204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	3	True	NA	NA	False	AATAAA	-16	NA	20534480	20559672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_20534575_20535086_20535200_20535350_20535395_20546345_20546524_20548592_20548706_20558541
transcript_7968.nnic	chr1	-	2700	12	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	0	-185	intron_retention	FALSE	canonical	3	20	junction_11	222.722337607662	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGGTAAAATTA	3	True	NA	-17	True	ATTAAA	-17	NA	160262549	160216737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160262448
transcript_7969.known	chr1	-	1237	9	FSM	ENSG00000162735.19	ENST00000532508.5	1237	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	310.545261395179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAAGGAAGGCATCCCT	6869	False	NA	NA	False	NA	NA	NA	160285096	160279295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160281185_160281296_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_79693.known	chr6	+	1889	12	FSM	ENSG00000272168.9	ENST00000606851.5	1889	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	25.1951064381509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACACAG	17	True	NA	26	True	GATAAA	-15	NA	21666443	22194387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_21666646_21668646_21668900_21783631_21783709_21802656_21802741_21909469_21909604_21978944_21979063_22020338_22020543_22056545_22056691_22110746_22110921_22173997_22174063_22191566_22191657_22194044
transcript_79705.known	chr6	+	1455	3	FSM	ENSG00000272168.9	ENST00000659720.1	1455	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	47	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-23	True	NA	NA	False	NA	NA	NA	21666403	21784591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_21666646_21668646_21668900_21783631
transcript_79713.nnic	chr6	+	2027	11	NNC	ENSG00000124532.15	novel	3939	11	NA	NA	2	787	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	175.228108475781	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTATGGATTCCTAAT	-19	True	NA	18	True	AATAAA	-20	NA	24402937	24424263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415015_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_79718.known	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	44.1317346135409	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	-21	True	NA	6	True	AATAAA	-18	NA	24402935	24426190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_7972.known	chr1	-	3653	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	49.767623275887	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCTGTGACTCTGGA	5	True	NA	-6	True	AATACA	-20	NA	160285133	160276806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_79721.nnic	chr6	+	1995	11	NNC	ENSG00000124532.15	novel	3939	11	NA	NA	-11	787	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_9	171.638573753105	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTATGGATTCCTAAT	-32	True	NA	18	True	AATAAA	-20	NA	24402924	24424263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422964_24423051_24423583
transcript_79727.known	chr6	+	1740	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	44.0807340128441	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	-3	True	NA	6	True	AATAAA	-15	NA	24402953	24423476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
transcript_79735.known	chr6	+	3821	9	FSM	ENSG00000124532.15	ENST00000274747.11	3821	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	199.241020813988	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	NA	False	NA	10	True	AATAAA	-22	NA	24402907	24426194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24403237_24405167_24405242_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_79745.known	chr6	-	1935	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	56.6862711186168	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTTTTAGTATGT	-16	True	NA	-16	True	AATAAA	-15	NA	24666899	24649978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
transcript_79750.known	chr6	-	714	2	FSM	ENSG00000111802.14	ENST00000480495.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTTCCAGGTTCCAGG	-6	True	NA	NA	False	NA	NA	NA	24666786	24665986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24666612_24666697
transcript_79756.known	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	467.421294622599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	-49	True	NA	NA	False	AATAAA	-36	NA	24667034	24705065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
transcript_79757.known	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	18.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	-7	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24667345_24697882_24698068_24701458
transcript_79760.known	chr6	+	733	3	FSM	ENSG00000112304.11	ENST00000476436.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	2	68	junction_1	479	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTAGAAATATTCTTGG	NA	False	NA	24	True	AATAAA	-16	NA	24687401	24701714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24687694_24697882_24698068_24701458
transcript_79762.known	chr6	+	1133	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	222.374871182275	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	-39	True	NA	32	True	AATATA	-15	NA	24774930	24786095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_79765.known	chr6	+	1263	7	FSM	ENSG00000112312.10	ENST00000230056.8	1263	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	198.237792113972	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTTCTATGCTTT	-33	True	NA	36	True	AATATA	-19	NA	24774936	24786099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_79771.known	chr6	+	1039	7	FSM	ENSG00000112312.10	ENST00000620958.4	1039	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	394.248088841982	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTGTCTGTTTCTA	26	False	NA	30	True	AATATA	-13	NA	24775412	24786093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_24775503_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_79779.known	chr6	-	2442	14	FSM	ENSG00000111913.20	ENST00000378023.8	2442	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	43.3607408395411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	24877355	24839358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_79781.known	chr6	-	3614	14	FSM	ENSG00000111913.20	ENST00000540914.5	3614	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	40.6003760148152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAAAAAGTGTGG	NA	False	NA	NA	False	AATAAA	-7	NA	24877365	24839372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_79784.known	chr6	-	2704	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	27.6086342724614	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTCTCAAAAAAAAA	8	True	NA	NA	False	NA	NA	NA	24935948	24839978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_79785.known	chr6	+	5485	37	FSM	ENSG00000079691.18	ENST00000329474.7	5485	37	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	14.6055122352597	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	-16	True	NA	17	True	AATAAA	-19	NA	25279373	25620530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243_25520338_25528794_25528894_25537854_25537984_25539946_25540079_25550909_25551086_25554008_25554097_25556700_25556851_25580923_25580991_25581242_25581440_25594414_25594528_25600313_25600747_25604811_25604894_25606060_25606274_25610049_25610182_25619446
transcript_79786.nnic	chr6	+	885	3	NNC	ENSG00000079691.18	novel	5485	37	NA	NA	76	-166811	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	54.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTGTTGCTGTTT	-12	True	NA	NA	False	ATTAAA	-17	NA	25279449	25285786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_25279836_25284811_25284910_25285385
transcript_79787.known	chr6	+	9418	8	FSM	ENSG00000112343.11	ENST00000357085.5	9418	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.57998973889762	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTTTCACCTTTCTG	-6	True	NA	NA	False	ATTAAA	-23	NA	25962801	25991231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_25962856_25963048_25963283_25966334_25966934_25969324_25969421_25971868_25972100_25973053_25973077_25973172_25973286_25983163
transcript_79789.known	chr6	+	4130	2	FSM	ENSG00000272462.4	ENST00000606723.2	4130	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCTAAATGTGTCAT	-4	True	NA	NA	False	CATAAA	-13	NA	25992661	26001775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_25992919_25997902
transcript_79790.known	chr6	+	508	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGTAGCTGTAAGAA	-2	True	NA	NA	False	NA	NA	NA	26020450	26020958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26020400_26021000
transcript_79791.known	chr6	-	731	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATCTCAATAAAAGAGCT	0	True	NA	0	True	NA	NA	NA	26056470	26055739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26055700_26056500
transcript_79792.known	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	-1	True	NA	4	True	AAAACA	-40	NA	26103932	26104337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26103900_26104300
transcript_79793.known	chr6	-	659	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTTTTATATGTATA	2308	False	NA	15	True	ATTAAA	-18	NA	26123910	26114872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26115136_26123514
transcript_79797.nnic	chr6	+	1548	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-2	-127	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	7.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGAACTATGTGTA	-10	True	NA	10	True	AATAAA	-18	NA	26124169	26138957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_79798.nnic	chr6	+	1703	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	7.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCATGTGTCATTAATT	-10	True	NA	11	True	AATAAA	-20	NA	26124169	26139112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_79799.known	chr6	+	1668	2	FSM	ENSG00000180573.10	ENST00000314088.6	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	240	False	NA	15	True	AATAAA	-24	NA	26124144	26139116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26124750_26138053
transcript_79802.known	chr6	+	1462	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	23	False	NA	-17	True	AATAGA	-32	NA	26124202	26139084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26124634_26138053
transcript_79804.known	chr6	+	789	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	19	False	NA	13	True	AATAAA	-20	NA	26158145	26171349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26158560_26170974
transcript_79805.known	chr6	+	1196	1	FSM	ENSG00000277224.3	ENST00000356530.6	473	1	4	-727	4	727	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAGATACTGAAGTT	2	True	NA	NA	False	AATACA	-23	NA	26199519	26200715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26199500_26200700
transcript_79806.known	chr6	+	1487	1	FSM	ENSG00000276966.3	ENST00000615164.3	412	1	-58	-1017	-58	1017	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATCTCATTGTCTATT	5034	False	NA	11	True	AATAAA	-18	NA	26204551	26206038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26204600_26206000
transcript_79807.known	chr6	-	1534	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	-4	-1041	-4	1041	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACAGTTTTGGCTGGCTG	-7	True	NA	NA	False	CATAAA	-28	NA	26216692	26215158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26215200_26216700
transcript_79810.known	chr6	+	401	1	FSM	ENSG00000274618.2	ENST00000244537.6	401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCTTCGTCACACGAAG	0	True	NA	NA	False	CATAAA	-18	NA	26240392	26240793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26240400_26240800
transcript_79811.known	chr6	-	494	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTTCAGTTGAAAGCG	0	True	NA	0	True	NA	NA	NA	26250635	26250141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26250100_26250600
transcript_79812.known	chr6	+	2060	1	FSM	ENSG00000275713.3	ENST00000619466.3	462	1	37	-1635	37	1635	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGTGAGTTAGTATT	37	False	NA	16	True	AATAAA	-17	NA	26251650	26253710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26251600_26253700
transcript_79813.known	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-1	True	NA	-11	True	AATAAA	-31	NA	26285534	26281054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26281588_26285033
transcript_79814.known	chr6	+	3776	11	FSM	ENSG00000186470.14	ENST00000377708.7	3776	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	2.93428015022424	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGTTTTTTC	3	True	NA	13	True	AATAAA	-18	NA	26365197	26378312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26365353_26367989_26368051_26368177_26368268_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
transcript_79818.known	chr6	+	3583	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.74278606921194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	-12	True	NA	6	True	AATAAA	-16	NA	26383107	26394874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_7982.known	chr1	-	3504	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	228.952445329204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGGTGGCTTCATGA	6811	False	NA	-19	True	ATTAAA	-21	NA	160285154	160276866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
transcript_79821.nic	chr6	+	2743	8	NIC	ENSG00000124508.17	novel	2733	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	8.99886614172778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	-18	True	NA	12	True	AATAAA	-17	NA	26383183	26393992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_79822.known	chr6	+	1790	8	FSM	ENSG00000124508.17	ENST00000469230.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	15.8873585993804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	-24	True	NA	6	True	AATAAA	-16	NA	26383095	26394874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26394297
transcript_79824.known	chr6	+	3241	7	FSM	ENSG00000124508.17	ENST00000352867.6	3241	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	11.0867789130417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	-18	True	NA	6	True	AATAAA	-16	NA	26383101	26394874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383182_26383791_26383916_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_79825.known	chr6	+	1068	6	FSM	ENSG00000124508.17	ENST00000482536.5	1068	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.5735036007657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTCAGCAGCCACCGC	6	True	NA	NA	False	NA	NA	NA	26383125	26393007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383182_26383791_26383916_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_79828.nic	chr6	+	1470	5	ISM	ENSG00000124508.17	ENST00000356709.9	3583	8	-6	4234	0	-268	5prime_fragment	FALSE	canonical	3	30	junction_1	6.87386354243376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTCTGTTGAAGACATG	-18	True	NA	4	True	AATACA	-17	NA	26383101	26390640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004
transcript_79832.known	chr6	+	1390	4	FSM	ENSG00000124508.17	ENST00000467485.5	1390	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	14.3372087784044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCCCAGGGCTACACA	-18	True	NA	NA	False	NA	NA	NA	26383101	26390908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383182_26383791_26383916_26388012_26388295_26390004
transcript_79833.known	chr6	+	2733	8	FSM	ENSG00000124508.17	ENST00000416795.6	2733	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.1363621449748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	6	True	NA	12	True	AATAAA	-17	NA	26383207	26393992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26383314_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_79834.known	chr6	+	2483	7	FSM	ENSG00000124549.15	ENST00000465856.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	26421390	26430588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26421625_26422088_26422198_26422932_26423760_26426241_26426524_26427870_26428108_26428642_26428786_26429937
transcript_79836.known	chr6	+	2890	8	FSM	ENSG00000112763.17	ENST00000312541.10	2890	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	10.5964953775158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	-7	True	NA	9	True	AATAAA	-18	NA	26457954	26469637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_79838.known	chr6	+	3113	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	14.6816559150582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	-1	True	NA	9	True	AATAAA	-18	NA	26457960	26469637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
transcript_79839.known	chr6	+	1687	8	FSM	ENSG00000112763.17	ENST00000469185.5	1687	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	16.8074327581094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTTGACTCTTTTTG	6	True	NA	11	True	AATAAA	-17	NA	26457967	26476621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26476121
transcript_79840.known	chr6	+	2945	8	FSM	ENSG00000124557.14	ENST00000684113.1	2945	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.832993127835043	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTCTTAACCTTTCTT	-2	True	NA	6	True	AATAAA	-23	NA	26500302	26510425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26500359_26501229_26501366_26501589_26501938_26504924_26505207_26506682_26506833_26507949_26507971_26508060_26508088_26508500
transcript_79841.known	chr6	+	1943	2	FSM	ENSG00000182952.5	ENST00000377575.3	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	0	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	-13	True	NA	NA	False	AATAAA	-18	NA	26538365	26546933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26538502_26545126
transcript_79843.known	chr6	+	2943	3	FSM	ENSG00000146109.5	ENST00000274849.3	2943	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	1	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTTGCCTCTTAATAT	-4	True	NA	11	True	ATTAAA	-20	NA	26596952	26600739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_26597224_26597913_26598111_26598264
transcript_79845.known	chr6	-	4811	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	9.10433352249844	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTCCACTGTACTG	0	True	NA	0	True	AATAAA	-22	NA	26659746	26634382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
transcript_79854.known	chr6	+	903	3	FSM	ENSG00000224843.8	ENST00000662403.1	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTTGAAGATAGT	NA	False	NA	6	True	AATAAA	-18	NA	27020072	27023925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27020656_27023253_27023398_27023749
transcript_79855.known	chr6	+	1062	3	FSM	ENSG00000224843.8	ENST00000666341.1	1062	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGATAGTTTGTTA	NA	False	NA	12	True	AATAAA	-24	NA	27019904	27023931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27020656_27023253_27023398_27023764
transcript_79856.known	chr6	+	985	4	FSM	ENSG00000224843.8	ENST00000668297.1	985	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATGCAATAATTGT	NA	False	NA	24	True	AATAAA	-36	NA	27019898	27023943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27020055_27020164_27020656_27023253_27023398_27023749
transcript_79857.known	chr6	+	1418	2	FSM	ENSG00000224843.8	ENST00000664092.1	1418	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTTTGTTGAACTGT	NA	False	NA	55	True	NA	NA	NA	27019958	27023974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27020656_27023253
transcript_79858.nnic	chr6	-	951	3	NNC	ENSG00000124635.9	novel	950	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-1	True	NA	NA	False	TATAAA	-15	NA	27132795	27126078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_27126463_27127263_27127402_27132366
transcript_7986.nic	chr1	-	1377	6	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	-13	7833	intron_retention	FALSE	canonical	3	108	junction_5	132.986615867914	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAGAAGAAAGTGGG	63	False	160262506	NA	False	NA	NA	NA	160262489	160231388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_79860.known	chr6	-	408	2	FSM	ENSG00000124635.9	ENST00000606923.1	408	2	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	6027	False	NA	NA	False	TATAAA	-15	NA	27132548	27126078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27126463_27132524
transcript_79862.nnic	chr6	-	861	2	Genic_Genomic	ENSG00000197903.8	novel	495	1	NA	NA	-25	8068	multi-exon	FALSE	canonical	3	75	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	643	False	NA	-4	True	AATAAA	-21	NA	27146880	27138292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr6_-_27138682_27146408
transcript_79863.nic	chr6	+	1167	6	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	3481	1049	-12	0	3prime_fragment	FALSE	canonical	3	31	junction_1	35.2102257874044	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTGACTTATGCTGG	142	False	NA	73	True	NA	NA	NA	27251181	27255571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79864.nic	chr6	+	2049	6	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	3481	167	-12	0	3prime_fragment	FALSE	canonical	3	31	junction_1	35.2102257874044	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	142	False	NA	19	True	AATAAA	-16	NA	27251181	27256453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79865.known	chr6	+	955	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	32.6534837345114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCTTTTTCTGGACT	-17	True	NA	NA	False	GGGGCT	-7	NA	27251193	27255662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79869.known	chr6	+	962	5	FSM	ENSG00000112812.16	ENST00000468138.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	26.0480325552622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCCTTTCCACTCCCTG	94	False	NA	NA	False	NA	NA	NA	27251619	27255319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79871.known	chr6	+	1002	4	FSM	ENSG00000112812.16	ENST00000492575.5	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	49.3783578323765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTGCTCTGCCATG	2	True	NA	NA	False	NA	NA	NA	27251212	27255908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27251265_27252807_27252950_27254985_27255132_27255246
transcript_79875.known	chr6	+	840	4	FSM	ENSG00000112812.16	ENST00000471463.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	55.5357742560795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCAGCTTGTTTTGAA	136	False	NA	NA	False	NA	NA	NA	27251661	27255381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27252041_27254692_27254873_27254985_27255132_27255246
transcript_79876.known	chr6	+	1809	3	FSM	ENSG00000112812.16	ENST00000377456.6	1809	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	62	False	NA	22	True	AATAAA	-19	NA	27251587	27256456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27252041_27254985_27255132_27255246
transcript_79877.known	chr6	+	1949	6	FSM	ENSG00000112812.16	ENST00000421826.6	1949	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53.8011152300768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	1	True	NA	19	True	AATAAA	-16	NA	27247700	27256453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27247808_27247881_27248049_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_79879.nnic	chr6	-	3384	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	6	1306	6	8	multi-exon	FALSE	canonical	3	55	junction_4	51.060625730596	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	10	True	NA	-13	True	AATAAA	-14	NA	27375225	27357822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
transcript_7988.nic	chr1	-	1106	6	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	-1	7833	combination_of_known_junctions	FALSE	canonical	3	101	junction_5	135.762144944753	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAGAAGAAAGTGGG	2	True	NA	NA	False	NA	NA	NA	160262550	160231388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
transcript_79882.nnic	chr6	-	2780	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	12	1372	-1	8	multi-exon	FALSE	canonical	3	77	junction_4	42.6695148788922	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	-30	True	NA	-13	True	AATAAA	-14	NA	27375265	27357822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_79884.nnic	chr6	-	2792	5	NNC	ENSG00000204789.5	novel	4164	5	NA	NA	6	8	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_4	67.5074070010099	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	-23	True	NA	-13	True	AATAAA	-14	NA	27375258	27357822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370244_27375193
transcript_79886.nnic	chr6	-	3161	3	NIC	ENSG00000204789.5	novel	4696	5	NA	NA	44	8	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	81.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	-1	True	NA	-13	True	AATAAA	-14	NA	27375187	27357822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_27360222_27363178_27363303_27374549
transcript_79887.nnic	chr6	-	2625	3	FSM	ENSG00000204789.5	ENST00000690588.1	2586	3	-31	-8	-18	8	multi-exon	FALSE	canonical	3	7	junction_2	81	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	NA	False	NA	-13	True	AATAAA	-14	NA	27375295	27357822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27360222_27363178_27363303_27375193
transcript_79888.known	chr6	-	2397	1	FSM	ENSG00000204789.5	ENST00000416749.2	1603	1	-367	-427	-367	6	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGTGTCATGTAGCTG	NA	False	NA	-15	True	AATAAA	-12	NA	27360221	27357824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27357800_27360200
transcript_79889.nnic	chr6	-	1339	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	45	3312	45	-1577	multi-exon	FALSE	canonical	3	55	junction_4	51.060625730596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTAAATATAGTGAATG	0	True	NA	NA	False	AAGAAA	-21	NA	27375186	27359828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
transcript_79891.known	chr6	+	749	4	FSM	ENSG00000124613.9	ENST00000461521.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	25.152865973218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCCTTTTGAATGCAA	9	True	NA	NA	False	NA	NA	NA	27388991	27400769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27389076_27395016_27395096_27399441_27399551_27400292
transcript_79892.known	chr6	+	4042	3	FSM	ENSG00000124613.9	ENST00000244576.9	4042	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	16.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCTATAGCTTTTTA	-5	True	NA	25	True	AATAAA	-29	NA	27388758	27403908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27389076_27399441_27399551_27400292
transcript_79894.known	chr6	+	325	2	FSM	ENSG00000124613.9	ENST00000482767.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGTCCATTGTCATT	58	False	NA	7	True	CATAAA	-21	NA	27388903	27391132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27389076_27390979
transcript_79895.known	chr6	-	3328	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	11.0995495404093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTCTGTTTTTAATAT	-10	True	NA	-4	True	ATTAAA	-18	NA	27473105	27450746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
transcript_79896.known	chr6	-	2899	6	FSM	ENSG00000096654.16	ENST00000377419.1	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	21.3297913726318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATTAACAATTCAA	7302	False	NA	-13	True	AATAAA	-16	NA	27472681	27450819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472660
transcript_79898.known	chr6	-	3101	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	25.1348363829964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	-23	True	NA	0	True	ATTAAA	-22	NA	27473118	27450742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
transcript_799.known	chr1	+	942	6	FSM	ENSG00000177674.16	ENST00000476512.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	359.758474535347	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGAGCCCCCATGGG	20	False	NA	NA	False	NA	NA	NA	11736116	11750326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11745987_11746224_11747439_11747546_11748414_11748611_11750076
transcript_79904.nic	chr6	+	1175	5	FSM	ENSG00000281706.4	ENST00000693645.1	1598	5	1	422	1	0	multi-exon	FALSE	canonical	3	7	junction_4	4.14578098794425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACGGGTGGAATTGT	NA	False	NA	9	True	AATAAA	-22	NA	27694027	27713284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27694507_27702313_27702418_27710123_27710226_27710680_27710890_27713003
transcript_79907.nnic	chr6	+	1516	5	FSM	ENSG00000281706.4	ENST00000693575.1	1927	5	-11	422	1	0	multi-exon	FALSE	canonical	2	4	junction_4	5.31507290636732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACGGGTGGAATTGT	NA	False	NA	9	True	AATAAA	-22	NA	27694027	27713284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27694507_27702313_27702418_27710123_27710226_27710680_27711231_27713003
transcript_79912.known	chr6	+	728	4	FSM	ENSG00000281706.4	ENST00000662411.2	1496	4	414	354	356	63	multi-exon	FALSE	canonical	0	0	junction_2	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCAGGTGCCTCTTTT	334	False	NA	77	True	NA	NA	NA	27694440	27713352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27694507_27702313_27702418_27710680_27710890_27713003
transcript_79914.known	chr6	+	834	2	FSM	ENSG00000281706.4	ENST00000625477.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCCCTGTAGTCCCAG	16	True	NA	NA	False	AATACA	-23	NA	27694072	27702713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27694507_27702313
transcript_79917.known	chr6	+	503	1	FSM	ENSG00000196747.5	ENST00000358739.5	495	1	26	-34	26	34	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTCGTCTTTGCCT	26	False	NA	44	True	NA	NA	NA	27808198	27808701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27808200_27808700
transcript_79918.known	chr6	+	1237	1	FSM	ENSG00000278828.2	ENST00000369163.4	1250	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTTTCACCCTAGAA	14	False	NA	3	True	AATAAA	-18	NA	27810063	27811300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27810100_27811300
transcript_79919.known	chr6	-	476	1	FSM	ENSG00000276368.2	ENST00000333151.5	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATCATAAAAAGATGACA	0	True	NA	1	True	CATAAA	-29	NA	27814777	27814301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27814300_27814800
transcript_79920.known	chr6	+	389	1	FSM	ENSG00000197238.5	ENST00000355057.3	389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAGCTGAAGAGTGG	0	True	NA	23	True	AATAAA	-24	NA	27824091	27824480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27824100_27824500
transcript_79921.known	chr6	-	387	1	FSM	ENSG00000273542.2	ENST00000611927.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCAGCTGAGGAGCCG	14	True	NA	NA	False	NA	NA	NA	27831560	27831173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27831200_27831600
transcript_79922.known	chr6	+	4137	3	FSM	ENSG00000233822.6	ENST00000606613.1	4137	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTGGACAAATTCTCT	-4	True	NA	NA	False	AATAAA	-15	NA	27838600	27855709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27839039_27841563_27841662_27852108
transcript_79923.known	chr6	+	715	3	FSM	ENSG00000233822.6	ENST00000449538.3	715	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCACTCTTTTTATTTTA	-15	True	NA	NA	False	ATTAAA	-36	NA	27838544	27852204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27839066_27841563_27841662_27852108
transcript_79924.known	chr6	+	482	1	FSM	ENSG00000276903.2	ENST00000613174.2	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGCGGGAGAGCTG	-1	True	NA	NA	False	AATACA	-24	NA	27865316	27865798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_27865300_27865800
transcript_79925.known	chr6	-	512	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACTGAGGATAGCT	0	True	NA	NA	False	NA	NA	NA	27890826	27890314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27890300_27890800
transcript_79926.known	chr6	-	487	1	FSM	ENSG00000278677.2	ENST00000359611.4	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTCTACGGAAGAACTG	1	True	NA	1	True	TTTAAA	-44	NA	27893185	27892698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_27892700_27893200
transcript_79929.nnic	chr6	-	628	3	NNC	ENSG00000269293.4	novel	2163	3	NA	NA	-21	-467	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	32.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTGGTGGACTC	790	False	NA	-1	True	AATAAA	-18	NA	28136868	28122264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_28122641_28123083_28123212_28136744
transcript_79930.known	chr6	-	1536	2	FSM	ENSG00000269293.4	ENST00000602810.2	1983	2	447	0	-19	0	multi-exon	FALSE	canonical	3	68	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGTATGATTGTTTTT	792	False	NA	NA	False	AATAAA	-12	NA	28136866	28121797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28123212_28136744
transcript_79931.known	chr6	+	1954	4	FSM	ENSG00000197279.5	ENST00000683778.1	1954	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	11.9536140513607	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	-3	True	NA	18	True	AATAAA	-33	NA	28080567	28089563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28080971_28085480_28085892_28086171_28086311_28088562
transcript_79932.known	chr6	-	686	2	FSM	ENSG00000272009.1	ENST00000605945.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCTTAAAGTGTGAAC	NA	False	NA	-7	True	ATTAAA	-25	NA	28081130	28078791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28078973_28080625
transcript_79934.nnic	chr6	+	1386	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-52	-3	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	31.4783876475414	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	NA	False	NA	16	True	ATTAAA	-16	NA	28124556	28130079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28129371
transcript_79935.known	chr6	+	1279	4	FSM	ENSG00000196812.6	ENST00000340487.5	1279	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	28.2410261066335	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	-7	True	NA	19	True	ATTAAA	-19	NA	28124608	28130082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28124678_28125412_28125831_28126782_28126922_28129429
transcript_79936.nnic	chr6	+	1413	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	46.9491450638052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	NA	False	NA	16	True	ATTAAA	-16	NA	28124579	28130079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28124678_28125362_28125831_28126782_28126922_28129371
transcript_79937.nnic	chr6	+	1358	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	46.3057471835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	NA	False	NA	19	True	ATTAAA	-19	NA	28124579	28130082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28124678_28125362_28125831_28126782_28126922_28129429
transcript_79941.known	chr6	+	1628	5	FSM	ENSG00000226314.9	ENST00000440790.6	1628	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATATGTGTACTGTGGTT	3	True	NA	21	True	AATAAA	-36	NA	28161780	28169594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28161822_28162579_28162767_28164748_28164902_28166500_28167555_28169401
transcript_79946.known	chr6	+	1659	4	FSM	ENSG00000137185.13	ENST00000252207.10	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	12.0277457017791	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTATCTGTGTTTAA	-9	True	NA	29	True	AATAAA	-30	NA	28225274	28233487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28232561
transcript_79948.known	chr6	+	1601	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	14.1970262926979	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	8	True	NA	24	True	AATAAA	-25	NA	28225291	28233482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
transcript_79949.known	chr6	+	2062	3	FSM	ENSG00000137185.13	ENST00000527436.5	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	55	False	NA	41	True	AGTAAA	-37	NA	28225338	28229230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28225367_28227011_28227505_28227689
transcript_79951.known	chr6	+	1791	5	FSM	ENSG00000137185.13	ENST00000425468.6	1791	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.5604951616792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCCAACATGCCTGAA	-9	True	NA	8	True	AATAAA	-9	NA	28225274	28233466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28230335_28230489_28232561
transcript_79952.known	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	5.40832691319598	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-9	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
transcript_79958.known	chr6	+	3080	7	FSM	ENSG00000137338.6	ENST00000682144.1	3080	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	9.28559218478941	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	-13	True	NA	7	True	NA	NA	NA	28281571	28302549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28281919_28283775_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_79962.nnic	chr6	+	1946	5	NNC	ENSG00000197062.12	novel	2685	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	22.0836477965032	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	-24	True	NA	4	True	AATAAA	-19	NA	28267120	28277530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28267214_28271853_28271935_28272021_28272340_28272669_28272788_28276194
transcript_79963.nnic	chr6	+	2598	5	NNC	ENSG00000197062.12	novel	2685	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	22.0836477965032	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGCAGATTTATTTAAA	-2	True	NA	14	True	AATAAA	-14	NA	28267142	28278204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28267214_28271853_28271935_28272021_28272340_28272669_28272788_28276194
transcript_79966.known	chr6	+	2362	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	11.7756811551038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	6	True	NA	11	True	AATAAA	-11	NA	28267057	28278201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
transcript_79970.known	chr6	+	1998	4	FSM	ENSG00000197062.12	ENST00000623276.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	22.3954360429878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	8	True	NA	4	True	AATAAA	-19	NA	28267152	28277530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267214_28271853_28272337_28272669_28272788_28276194
transcript_79972.known	chr6	+	2321	4	FSM	ENSG00000197062.12	ENST00000614088.1	2321	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	17.4610678049451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTTGTGGAAGATAA	-5	True	NA	31	True	AATAAA	-31	NA	28267358	28278221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267454_28271853_28271935_28272669_28272788_28276194
transcript_79974.known	chr6	+	2729	4	FSM	ENSG00000197062.12	ENST00000619937.4	2729	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.131126469709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGGAAGATAATTT	-5	True	NA	34	True	AATAAA	-34	NA	28267358	28278224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28267454_28271853_28272340_28272669_28272788_28276194
transcript_79980.known	chr6	+	4799	7	FSM	ENSG00000189298.14	ENST00000377255.3	4799	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	20.623611064344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAGTGGATTCTTAAA	3	True	NA	8	True	AATAAA	-15	NA	28349949	28369170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28350068_28350271_28350389_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79982.nnic	chr6	+	2191	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	14.3861044066836	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	-33	True	NA	6	True	AATAAA	-15	NA	28349913	28366746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28349965_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79983.nnic	chr6	+	2195	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	16.3633737352662	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	-21	True	NA	6	True	AATAAA	-15	NA	28349925	28366746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_28350068_28359524_28359902_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_79984.known	chr6	+	4687	6	FSM	ENSG00000189298.14	ENST00000252211.7	4687	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.1424873893284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGGATTCTTAAATT	0	True	NA	10	True	AATAAA	-17	NA	28349946	28369172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_28350068_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_7999.known	chr1	-	738	4	FSM	ENSG00000132716.19	ENST00000497354.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	374.823514025823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGACGCGGACTCTGAT	882	False	NA	NA	False	NA	NA	NA	160220934	160217683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160220458
transcript_79990.known	chr6	-	3050	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6.23609564462324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	11	True	NA	0	True	AATAAA	-30	NA	28336134	28324736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
transcript_79991.known	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.08248290463863	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-3	True	NA	0	True	AATAAA	-30	NA	28336148	28324736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
transcript_79992.known	chr6	-	2562	3	FSM	ENSG00000235109.8	ENST00000446474.5	2562	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCTAAACCTTTGGC	11	True	NA	-12	True	AATAAA	-18	NA	28336134	28324748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28326855_28327382_28327534_28335829
transcript_79993.known	chr6	-	1005	3	FSM	ENSG00000235109.8	ENST00000435857.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCCAGCATCTCCG	126	False	NA	NA	False	NA	NA	NA	28336375	28326294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28326855_28327382_28327534_28336081
transcript_79994.nic	chr6	+	1616	2	ISM	ENSG00000189298.14	ENST00000252211.7	4687	6	-21	8174	-21	-5748	5prime_fragment	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACCAGTTTCCAATG	-21	True	NA	NA	False	AATAAA	-23	NA	28349925	28360998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_28350068_28359524
transcript_79995.known	chr6	-	3909	6	FSM	ENSG00000158691.15	ENST00000396827.3	3909	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	12.4354332453679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTAACTTGCTTATTC	41	False	NA	NA	False	AATAAA	-14	NA	28399731	28379218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28380872_28382190_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
transcript_79996.known	chr6	-	7711	4	FSM	ENSG00000158691.15	ENST00000684592.1	7711	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.71547606649408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAATATTTTTGTGTT	-1	True	NA	-9	True	TATAAA	-14	NA	28399747	28384737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28391743_28392901_28393047_28398003_28398474_28399656
transcript_79998.nic	chr6	-	869	3	ISM	ENSG00000158691.15	ENST00000684592.1	7711	4	-31	8032	-31	-8032	5prime_fragment	FALSE	canonical	3	37	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTCTCAGACAGCCTAG	-6	False	NA	NA	False	ATTAAA	-38	NA	28399778	28392769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_28393047_28398003_28398474_28399656
transcript_8.known	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00025_+_0_2000
transcript_80001.known	chr6	-	5495	5	FSM	ENSG00000158691.15	ENST00000361028.5	5495	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.9014387744578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTTCTGTAAAAAGCT	12	True	NA	0	True	AATAAA	-21	NA	28399734	28378954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
transcript_80003.known	chr6	-	987	2	FSM	ENSG00000287804.2	ENST00000666335.1	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTATATTGCTTTTAT	1	True	NA	NA	False	TTTAAA	-15	NA	28489455	28476995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28477891_28489363
transcript_80005.nnic	chr6	-	411	2	FSM	ENSG00000287804.2	ENST00000689665.1	413	2	2	0	2	0	multi-exon	FALSE	canonical	3	35	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTCTTTCTGGGTG	-7	True	NA	0	True	ATTAAA	-18	NA	28489491	28485428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28485712_28489363
transcript_80006.known	chr6	-	709	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	52	629	52	-629	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACAGTGCTGGGATT	9	True	NA	NA	False	NA	NA	NA	28839006	28837868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28838321_28838749
transcript_80008.known	chr6	-	2963	8	FSM	ENSG00000204713.11	ENST00000377199.4	2963	8	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_4	29.2546873969605	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	-23	True	NA	-7	True	AATAAA	-18	NA	28923985	28903001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_28904666_28907235_28907263_28908807_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
transcript_8001.known	chr1	-	1607	4	FSM	ENSG00000132716.19	ENST00000610139.5	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	144.962064002966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	127	False	NA	40	True	AATAAA	-17	NA	160262425	160239221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160240371_160243959_160244035_160261284_160261359_160262116
transcript_80013.nic	chr6	+	1639	6	ISM	ENSG00000204655.12	ENST00000376889.3	1981	8	6682	7	-4116	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAACCCCTTGTCTTTT	8867	False	NA	NA	False	AATAAA	-42	NA	29666000	29672365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_29666266_29667642_29667664_29667903_29667925_29670280_29670398_29670700_29670722_29671171
transcript_80014.known	chr6	+	1283	7	FSM	ENSG00000204642.14	ENST00000334668.8	1283	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4.61880215351701	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	NA	False	NA	15	True	AATAAA	-27	NA	29723339	29726525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_80017.nnic	chr6	-	931	3	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCACTCTTTCTCTTC	-15	True	NA	-3	True	ATTAAA	-15	NA	29749038	29726602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_29727140_29745472_29745728_29748899
transcript_80020.nnic	chr6	-	733	3	NIC	ENSG00000273340.1	novel	1157	6	NA	NA	-69	214	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGCGGTCATTGTATTA	-15	True	NA	-16	True	AATATA	-4	NA	29749038	29741516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_29741856_29745472_29745728_29748899
transcript_80021.nnic	chr6	-	680	2	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	-17	True	NA	-1	True	ATTAAA	-17	NA	29749040	29726600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_29727140_29748899
transcript_80022.nnic	chr6	-	2010	2	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	9	741	intron_retention	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGTTATCTATTCAG	-17	True	NA	-10	True	AATAAA	-14	NA	29749040	29737017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_29738887_29748899
transcript_80025.known	chr6	+	1319	7	FSM	ENSG00000204632.13	ENST00000360323.11	1319	7	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	5.7373048260195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTTCAAATTATTT	0	True	NA	-92	True	ATTAAA	-20	NA	29827824	29831021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_80027.known	chr6	+	1127	6	FSM	ENSG00000204632.13	ENST00000376818.7	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.2097992144802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	20	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29827918_29828046_29828317_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_8003.known	chr1	-	728	3	FSM	ENSG00000132716.19	ENST00000447377.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCTGAAGGTGGTGGT	38	False	NA	NA	False	NA	NA	NA	160262514	160239783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160240371_160243959_160244035_160262448
transcript_80033.nnic	chr6	+	759	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-57	607	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.76662979332984	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTATGCTGATTT	73	False	NA	NA	False	AATAAA	-30	NA	29926401	29929839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_29926531_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_80040.known	chr6	+	1766	7	FSM	ENSG00000206503.13	ENST00000495183.5	1766	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	287.841053747068	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	16	False	NA	29	True	AATAAA	-30	NA	29942551	29945884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945062_29945092_29945233_29945282_29945450
transcript_80041.known	chr6	+	1535	8	FSM	ENSG00000206503.13	ENST00000376809.10	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	120.378823820844	3627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	-4	True	NA	15	True	AATAAA	-16	NA	29942531	29945870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_29942627_29942756_29943027_29943267_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233_29945282_29945450
transcript_80043.known	chr6	+	743	5	FSM	ENSG00000066379.15	ENST00000359374.8	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	40.1995024844836	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	4	True	NA	43	True	ATTAAA	-28	NA	30061258	30064909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061399_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_80046.known	chr6	+	754	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	76.985388224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	8	True	NA	43	True	ATTAAA	-28	NA	30061262	30064909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_80048.known	chr6	+	571	4	FSM	ENSG00000066379.15	ENST00000463141.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	82.0744919096197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	1	True	NA	43	True	ATTAAA	-28	NA	30061329	30064909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061399_30061514_30061670_30062223_30062334_30064672
transcript_80049.known	chr6	+	851	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	9.97775303139718	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	10	True	NA	41	True	ATTAAA	-26	NA	30061264	30064907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
transcript_8005.known	chr1	+	557	2	FSM	ENSG00000228606.3	ENST00000442130.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGGCCACTTCCTGGA	7	True	NA	4	True	AATAAA	-17	NA	160261743	160262778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160261923_160262400
transcript_80056.known	chr6	+	1689	4	FSM	ENSG00000204619.8	ENST00000376769.6	1689	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	198.462982834471	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	-17	True	NA	18	True	AATAAA	-19	NA	30067204	30070333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30067480_30068278_30068354_30068589_30068699_30069103
transcript_80057.known	chr6	+	1621	3	FSM	ENSG00000204619.8	ENST00000376772.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	4.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	-24	True	NA	18	True	AATAAA	-19	NA	30067197	30070333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30067480_30068589_30068699_30069103
transcript_8006.known	chr1	-	5318	33	FSM	ENSG00000122218.16	ENST00000241704.8	5318	33	0	0	0	0	multi-exon	TRUE	canonical	3	776	junction_19	67.2791526031653	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAAAAAGCTATTC	8	True	NA	-16	True	AATAAA	-28	NA	160343250	160288593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_80062.nic	chr6	-	3418	10	NIC	ENSG00000234127.9	novel	3518	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_8	15.8402518997304	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-12	True	NA	NA	False	AATAAA	-16	NA	30213417	30184454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_80063.known	chr6	-	3318	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	31.0199028850833	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-22	True	NA	NA	False	AATAAA	-16	NA	30213427	30184454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
transcript_80066.nic	chr6	-	3197	8	NIC	ENSG00000234127.9	novel	3318	9	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_7	42.4225584964857	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-5	True	NA	NA	False	AATAAA	-16	NA	30213410	30184454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30213304
transcript_80067.known	chr6	-	1124	6	FSM	ENSG00000234127.9	ENST00000416596.5	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	16.5093912667912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCAGAGCTCATGCAG	-14	True	NA	NA	False	NA	NA	NA	30213419	30196535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_80072.known	chr6	+	3249	8	FSM	ENSG00000204599.15	ENST00000396551.8	3624	8	375	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	30.7418480981511	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	273	False	NA	27	True	NA	NA	NA	30326843	30343729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30326996_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_80078.known	chr6	+	1013	5	FSM	ENSG00000204599.15	ENST00000428728.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	34.022051672408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACCTTTGCCCCTGCATA	334	False	NA	NA	False	NA	NA	NA	30326904	30335977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744
transcript_8008.nic	chr1	-	1701	12	ISM	ENSG00000122218.16	ENST00000649231.1	3969	31	-34	20115	-5	-812	5prime_fragment	FALSE	canonical	3	787	junction_5	87.4439608034296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACATTCTAATTTTAG	-20	True	NA	NA	False	AAAAAG	-1	NA	160343278	160309741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_80083.known	chr6	+	577	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	502.756899505119	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	NA	False	NA	24	True	AATAAA	-22	NA	30345130	30346857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
transcript_80085.known	chr6	+	522	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	498.95609776813	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	12	True	NA	24	True	AATAAA	-22	NA	30345168	30346857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
transcript_80087.known	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	109.782455337818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	1	True	NA	NA	False	NA	NA	NA	30326866	30286727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_80089.known	chr6	+	450	4	FSM	ENSG00000241370.6	ENST00000489124.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	512.358164655243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	-6	True	NA	24	True	AATAAA	-22	NA	30345150	30346857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345399_30346431_30346558_30346712
transcript_80090.known	chr6	+	621	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	102.944429453738	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	-2	True	NA	24	True	AATAAA	-22	NA	30345154	30346857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
transcript_80092.known	chr6	-	6734	4	FSM	ENSG00000231074.10	ENST00000668974.1	6734	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	91.7205902001653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	2929	False	NA	NA	False	AATACA	-39	NA	30326490	30286805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326150
transcript_80093.known	chr6	-	7230	4	FSM	ENSG00000231074.10	ENST00000659132.1	7230	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	65.4335965353851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	30327086	30286702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
transcript_80101.known	chr6	-	1419	3	FSM	ENSG00000231074.10	ENST00000454269.6	1419	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTTAAGGAACTAAAAC	10	True	NA	-62	True	NA	NA	NA	30326344	30291480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30296131_30296238_30326150
transcript_80102.known	chr6	-	1633	3	FSM	ENSG00000231074.10	ENST00000412685.8	1963	3	318	12	-48	-6	multi-exon	FALSE	canonical	1	6	junction_1	61	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAAACTGTATACTAACA	2881	False	NA	NA	False	NA	NA	NA	30326538	30291257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30292600_30296131_30296238_30326353
transcript_80103.known	chr6	-	4518	3	FSM	ENSG00000231074.10	ENST00000449544.6	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	112	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCCAAAGTTTGTCAC	-1	True	NA	-25	True	NA	NA	NA	30326395	30290797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30294965_30296131_30296238_30326150
transcript_80104.known	chr6	-	5050	3	FSM	ENSG00000231074.10	ENST00000426882.6	5050	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	79.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAACAATGTTAAAA	2269	False	NA	-45	True	NA	NA	NA	30327150	30290817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30294965_30296131_30296238_30326353
transcript_80105.known	chr6	-	4433	3	FSM	ENSG00000231074.10	ENST00000454129.5	4433	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	18	True	NA	NA	False	NA	NA	NA	30326376	30291005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30294965_30296131_30296238_30326008
transcript_80107.known	chr6	+	594	4	FSM	ENSG00000241370.6	ENST00000428040.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1104	junction_3	82.7862038962746	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	2	True	NA	24	True	AATAAA	-22	NA	30345158	30346857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30345399_30345490_30345574_30346431_30346558_30346712
transcript_80108.known	chr6	+	3535	8	FSM	ENSG00000204599.15	ENST00000376659.9	3535	8	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	37.2284727550496	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	24	False	NA	27	True	NA	NA	NA	30327258	30343729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30327697_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_80109.known	chr6	+	2548	8	FSM	ENSG00000204592.9	ENST00000376630.5	2548	8	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_2	12.2807298859071	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	-2	True	NA	23	True	AATAAA	-19	NA	30489508	30494194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30489596_30489725_30489996_30490239_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_80122.known	chr6	-	6801	12	FSM	ENSG00000204590.13	ENST00000376621.8	6801	12	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_5	38.8429769650079	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTGGATATGTTTCT	-3	True	NA	NA	False	AATAAA	-32	NA	30556489	30541380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
transcript_80127.known	chr6	+	2005	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.22494979899437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	11	True	NA	79	True	AATAAA	-28	NA	30557315	30563723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
transcript_80129.known	chr6	+	1944	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.8878405775519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	9	True	NA	79	True	AATAAA	-28	NA	30557313	30563723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
transcript_80130.nic	chr6	+	677	3	ISM	ENSG00000204576.12	ENST00000498336.5	2005	5	-41	1958	-5	-1958	5prime_fragment	FALSE	canonical	3	26	junction_1	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGTTTATCAGGATTCA	-6	True	NA	10	True	AATAAA	-15	NA	30557274	30561765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30557451_30558149_30558213_30561327
transcript_80131.known	chr6	+	1797	3	FSM	ENSG00000204576.12	ENST00000376557.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	16	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	-1	True	NA	79	True	AATAAA	-28	NA	30557279	30563723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30557451_30561833_30562125_30562388
transcript_80132.nic	chr6	+	592	2	ISM	ENSG00000204576.12	ENST00000481741.5	1944	4	-19	1960	0	-1960	5prime_fragment	FALSE	canonical	3	32	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACGGTTTATCAGGATT	-10	True	NA	8	True	AATAAA	-13	NA	30557294	30561763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30557451_30561327
transcript_80133.known	chr6	+	3426	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	89.5865115715282	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	2	True	AAAAAG	-20	NA	30571423	30591522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_80134.known	chr6	+	3405	25	FSM	ENSG00000204574.14	ENST00000326195.13	3405	25	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_3	94.0789783462101	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	-11	True	NA	2	True	AAAAAG	-20	NA	30571441	30591522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_80135.known	chr6	+	3131	24	FSM	ENSG00000204574.14	ENST00000376545.7	3131	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	155.38220454609	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTTTGGAGATTG	NA	False	NA	16	True	AATAAA	-21	NA	30571392	30591313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_80136.known	chr6	-	4511	20	FSM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_19	25.5334227762429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTATTTAACCCCTAG	-2	True	NA	-13	True	AATAAA	-15	NA	30617243	30600412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604736_30604993_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_80139.nic	chr6	-	1513	11	ISM	ENSG00000204569.10	ENST00000376511.7	4511	20	-31	4605	-30	0	5prime_fragment	FALSE	canonical	3	161	junction_10	24.9407297407273	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTCACCTACGGCTGC	1358	False	NA	17	True	AAGAAA	-7	NA	30617274	30605017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_8014.known	chr1	-	616	5	FSM	ENSG00000122218.16	ENST00000541366.1	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_1	89.7621858022631	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGCAAAATAATAAATG	-1	True	NA	-40	True	NA	NA	NA	160343259	160333461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_80143.known	chr6	+	1409	7	FSM	ENSG00000204568.12	ENST00000472229.1	1409	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	314.114451894352	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCTGTTTCCGATGAA	13	True	NA	28	True	AATAAA	-22	NA	30617859	30626395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30617944_30619492_30619602_30619680_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_80144.known	chr6	+	1398	7	FSM	ENSG00000204568.12	ENST00000259873.5	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_4	68.2609372595744	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	-7	True	NA	25	True	AATAAA	-19	NA	30617839	30626392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_80156.known	chr6	+	1476	13	FSM	ENSG00000137343.18	ENST00000376485.8	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	42.5645751248095	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	-11	True	NA	14	True	AATAAA	-23	NA	30626855	30646823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_80158.known	chr6	+	1738	13	FSM	ENSG00000137343.18	ENST00000330083.6	1738	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	57.9436987274908	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	7	True	NA	12	True	AATAAA	-21	NA	30626873	30646821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30627275_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_8016.known	chr1	+	2822	17	FSM	ENSG00000162736.17	ENST00000294785.10	2822	17	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_8	31.9852871450297	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	-2	True	NA	13	True	ATTAAA	-16	NA	160343382	160358949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160351221_160351373_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_80160.nic	chr6	+	1850	12	ISM	ENSG00000137343.18	ENST00000376485.8	1476	13	-15	0	-1	0	intron_retention	FALSE	canonical	3	103	junction_10	42.5489509052867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	8994	False	NA	14	True	AATAAA	-23	NA	30626840	30646823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066
transcript_80162.known	chr6	+	1195	12	FSM	ENSG00000137343.18	ENST00000468713.5	1195	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	52.1090718771773	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	-8	True	NA	14	True	AATAAA	-23	NA	30626892	30646823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066_30646110_30646468
transcript_80163.nic	chr6	+	1420	12	NIC	ENSG00000137343.18	novel	1476	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	58.7954852935928	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	8994	False	NA	12	True	AATAAA	-21	NA	30626840	30646821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_80165.known	chr6	+	2119	11	FSM	ENSG00000137343.18	ENST00000329992.12	2119	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	62.6277893590377	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	19	True	NA	53	True	AAAAAG	-17	NA	30626885	30644679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30643528
transcript_80167.known	chr6	+	1527	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	53.0253712858288	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	5	False	NA	14	True	AATAAA	-23	NA	30626919	30646823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
transcript_80168.nic	chr6	+	1176	11	NIC	ENSG00000137343.18	novel	1195	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	67.7728559232972	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	8994	False	NA	12	True	AATAAA	-21	NA	30626840	30646821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30645894_30645975_30646066_30646110_30646468
transcript_80170.known	chr6	+	2646	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	37.513783475108	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	9	True	NA	53	True	AAAAAG	-17	NA	30626875	30644679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
transcript_80172.known	chr6	+	2061	10	FSM	ENSG00000137343.18	ENST00000319027.9	2061	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	78.1685421870865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	8	True	NA	53	True	AAAAAG	-17	NA	30626874	30644679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30643528
transcript_80174.known	chr6	+	2611	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	62.2985503442897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	8995	False	NA	53	True	AAAAAG	-17	NA	30626841	30644679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
transcript_80177.known	chr6	-	3406	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_8	34.9078724185062	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	1	True	NA	-14	True	AATAAA	-44	NA	30673006	30653126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_80180.known	chr6	+	1402	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	19.2208220427743	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCAGGTTCTGTTT	36	False	NA	15	True	ATTAAA	-22	NA	30647072	30653210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_80181.known	chr6	+	1337	6	FSM	ENSG00000204564.12	ENST00000488383.5	1337	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	35.2022726539069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	18	True	NA	25	True	AATAAA	-26	NA	30647054	30653109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30647304_30649557_30649960_30650993_30651101_30651265_30651467_30652647_30652718_30652801
transcript_80182.nnic	chr6	-	1049	5	NNC	ENSG00000204560.10	novel	3406	20	NA	NA	-31	-2892	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	82.0712343028908	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAATGACTGCTTTT	2	True	NA	-1	True	AATAAA	-24	NA	30673037	30668021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30668209_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_80184.known	chr6	-	2853	4	FSM	ENSG00000146112.12	ENST00000399199.7	2853	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	17.9133717900592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	0	True	NA	-3	True	AATAAA	-17	NA	30687216	30676388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30677289_30679178_30679390_30684407_30686047_30687113
transcript_80185.nic	chr6	-	1183	2	ISM	ENSG00000146112.12	ENST00000615892.4	1448	3	5283	0	5283	0	3prime_fragment	FALSE	canonical	3	44	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	9427	False	NA	-3	True	AATAAA	-17	NA	30679461	30676388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_30677289_30679178
transcript_80187.known	chr6	-	1453	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	27.9205221218292	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-14	True	NA	-4	True	AATAAA	-21	NA	30691002	30688046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
transcript_80189.known	chr6	-	1411	4	FSM	ENSG00000137404.15	ENST00000376421.7	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	10.6562449087639	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATGCAGTCTGTCAG	4	True	NA	-6	True	AATAAA	-19	NA	30690984	30688048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690841
transcript_80190.known	chr6	-	1228	3	FSM	ENSG00000137404.15	ENST00000376420.9	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	34.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	12	True	NA	-4	True	AATAAA	-21	NA	30690976	30688046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30690046_30690244_30690841
transcript_80191.known	chr6	-	1029	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	14	True	NA	-4	True	AATAAA	-21	NA	30690974	30688046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30690841
transcript_80192.known	chr6	-	1260	3	FSM	ENSG00000137404.15	ENST00000462857.5	1260	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	37	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	2	True	NA	-4	True	AATAAA	-21	NA	30690986	30688046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30690024_30690244_30690841
transcript_80193.known	chr6	-	1199	3	FSM	ENSG00000137404.15	ENST00000482141.5	1199	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	457	False	NA	-4	True	AATAAA	-21	NA	30690967	30688046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30688943_30689275_30689453_30690841
transcript_80194.known	chr6	+	2632	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_1	5560.76711334766	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	-8	True	NA	36	True	AATAAA	-20	NA	30721573	30725426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
transcript_80196.known	chr6	+	2903	4	FSM	ENSG00000196230.14	ENST00000396389.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	2	459	junction_1	5806.35554084201	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	23	False	NA	36	True	AATAAA	-20	NA	30721666	30725426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30722263_30722536_30722646_30722917_30723029_30723339
transcript_80197.known	chr6	-	6968	15	FSM	ENSG00000137337.16	ENST00000376406.8	6968	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	65.1762524049291	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	18	True	NA	-19	True	AATAAA	-19	NA	30717281	30699806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30707565_30708358_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
transcript_80198.known	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	12703	junction_2	590.579940961989	4064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	-2	True	NA	32	True	AATAAA	-16	NA	30720351	30725422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
transcript_80199.known	chr6	+	3209	3	FSM	ENSG00000196230.14	ENST00000680530.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	3	12703	junction_1	72.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTGAAAAAAGCTGCGA	36	False	NA	19	True	AATAAA	-3	NA	30721617	30725409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30722646_30722917_30723029_30723339
transcript_802.known	chr1	+	809	6	FSM	ENSG00000177674.16	ENST00000452018.6	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	362.449996551248	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTCCCAGGCTGGA	20	True	NA	NA	False	NA	NA	NA	11736172	11750409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748590_11750076
transcript_80200.nnic	chr6	-	1708	14	NNC	ENSG00000137312.15	novel	1866	13	NA	NA	-52	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	190.189845982358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	1761	False	NA	-16	True	ATTAAA	-14	NA	30742784	30727829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526_30742572_30742705
transcript_80205.nic	chr6	-	1729	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-4	-121	combination_of_known_junctions	FALSE	canonical	3	58	junction_12	182.491761610094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	2017	False	NA	-16	True	ATTAAA	-14	NA	30742528	30727829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742383
transcript_80206.nic	chr6	-	1648	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-6	-121	combination_of_known_junctions	FALSE	canonical	3	121	junction_12	165.909781373961	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	2015	False	NA	-16	True	ATTAAA	-14	NA	30742530	30727829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
transcript_80207.known	chr6	-	1866	13	FSM	ENSG00000137312.15	ENST00000376389.8	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_9	57.1639941066247	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-4	True	NA	-13	True	AATAAA	-22	NA	30742687	30727708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526
transcript_8021.nic	chr1	+	2421	14	NIC	ENSG00000162736.17	novel	2822	17	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	120.027166550157	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	5	True	NA	13	True	ATTAAA	-16	NA	160343369	160358949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_80213.nic	chr6	-	1481	11	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-6	-121	combination_of_known_junctions	FALSE	canonical	3	52	junction_9	252.771220671974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	2015	False	NA	-16	True	ATTAAA	-14	NA	30742530	30727829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30742146_30742204_30742466
transcript_80222.known	chr6	+	527	2	FSM	ENSG00000272273.2	ENST00000607333.2	573	2	0	46	0	-43	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTTGCATAAGTTAAAA	-8	True	NA	25	True	AATAAA	-40	NA	30742928	30743592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30743097_30743233
transcript_80223.known	chr6	-	1237	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	-2	True	NA	-19	True	AATAAA	-19	NA	30744547	30743198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30744197_30744308
transcript_80224.known	chr6	-	1350	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	-3	True	NA	-19	True	AATAAA	-19	NA	30744548	30743198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30743200_30744500
transcript_8023.known	chr1	+	5354	8	FSM	ENSG00000162738.6	ENST00000368061.3	5354	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	15.9552946877025	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCATTCTGTTGCTTT	-22	True	NA	16	True	AATAAA	-16	NA	160400563	160428670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_160400870_160415647_160415909_160416061_160416183_160419001_160419610_160420410_160420548_160421051_160421188_160424051_160424284_160425117
transcript_80239.nnic	chr6	-	979	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-88	451	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	60.6025302002042	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTCAATTTTTTGTT	0	True	NA	-3	True	AATAAA	-21	NA	30848247	30839074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
transcript_8024.nnic	chr1	-	1460	4	NNC	ENSG00000117091.10	novel	1097	4	NA	NA	25091	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAAGTTGTCCCAAAT	NA	False	NA	1	True	AATAAA	-29	NA	160686712	160678745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_160679132_160681201_160681469_160684886_160685190_160686208
transcript_80244.nnic	chr6	-	1359	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-94	229	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	79.1496472933813	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATCATGGACTCC	-6	True	NA	NA	False	NA	NA	NA	30848253	30839296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_30840020_30843377_30843615_30847036_30847150_30847967
transcript_80248.known	chr6	-	799	3	FSM	ENSG00000237923.1	ENST00000442852.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGGAGTTCGAGACCAG	88	False	NA	NA	False	NA	NA	NA	30848159	30839525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_30840020_30847036_30847150_30847967
transcript_8025.known	chr1	-	1161	8	FSM	ENSG00000158764.7	ENST00000368029.4	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	23.932728849926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	2	True	NA	-5	True	ACTAAA	-17	NA	160954809	160945024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954386_160954451_160954726
transcript_80257.nnic	chr6	-	1016	2	NIC	ENSG00000237923.1	novel	799	3	NA	NA	-101	229	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATCATGGACTCC	NA	False	NA	NA	False	NA	NA	NA	30848260	30839296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_30840020_30847967
transcript_80258.nic	chr6	-	467	2	ISM	ENSG00000237923.1	ENST00000442852.1	799	3	-169	7518	-169	-7518	5prime_fragment	FALSE	canonical	3	184	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGAGTGAGTAACTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	30848328	30847043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_30847150_30847967
transcript_80259.nic	chr6	+	3695	18	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	155.758818975303	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	-9	True	NA	25	True	AATAAA	-18	NA	30882932	30900156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_80261.known	chr6	+	3588	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	143.827030991222	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	1529	False	NA	NA	False	NA	NA	NA	30882612	30899840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_80262.known	chr6	+	3783	18	FSM	ENSG00000204580.14	ENST00000376569.7	3783	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	188.779030857109	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	-26	True	NA	25	True	AATAAA	-18	NA	30884068	30900156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30884146_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_80263.known	chr6	+	3575	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	26.2830563053745	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	-20	True	NA	17	True	GATAAA	-17	NA	30914237	30926459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_80268.known	chr6	+	1712	14	FSM	ENSG00000213780.11	ENST00000259895.9	1712	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.41857423549425	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	0	True	NA	40	True	AATAAA	-17	NA	30908206	30914106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_80271.known	chr6	+	1673	14	FSM	ENSG00000213780.11	ENST00000376316.5	1673	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.91976065696355	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	14	True	NA	40	True	AATAAA	-17	NA	30908220	30914106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_30908379_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_80278.nic	chr6	+	622	3	ISM	ENSG00000213780.11	ENST00000453897.4	598	5	-66	965	-50	-965	5prime_fragment	FALSE	canonical	3	23	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTTTCCCTTTTAT	436	False	NA	NA	False	AATAAA	-21	NA	30908156	30909669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_30908404_30909033_30909174_30909434
transcript_80279.known	chr6	-	868	2	FSM	ENSG00000204538.4	ENST00000259845.5	868	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATCTAGGCTGCTGC	1	True	NA	NA	False	AATAAA	-17	NA	31139066	31137533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31138307_31138971
transcript_80282.nic	chr6	-	2753	19	NIC	ENSG00000204536.15	novel	2971	18	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_18	38.6580450158107	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8508	False	NA	-12	True	AATAAA	-17	NA	31158250	31142438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384_31157501_31158166
transcript_80284.known	chr6	-	2625	18	FSM	ENSG00000204536.15	ENST00000376266.9	2625	18	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_17	23.359385686571	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8520	False	NA	-12	True	AATAAA	-17	NA	31158238	31142438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_803.known	chr1	+	786	6	FSM	ENSG00000177674.16	ENST00000400895.6	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	344.490928763008	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACCAAGAGGCCAGGAG	-29	True	NA	NA	False	NA	NA	NA	11736123	11750316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748611_11750076
transcript_80315.known	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1707.84820754071	21167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	-2	True	NA	-5	True	AATAAA	-33	NA	31170682	31164336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
transcript_80320.known	chr6	+	3243	4	FSM	ENSG00000137310.12	ENST00000376257.8	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	17.7951304200522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	20	True	NA	29	True	AATAAA	-17	NA	31158588	31164215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31158723_31158896_31159708_31161446_31162006_31162476
transcript_80321.known	chr6	+	3039	4	FSM	ENSG00000137310.12	ENST00000376255.4	3039	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	19.2006944318862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	-22	True	NA	29	True	AATAAA	-17	NA	31158546	31164215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31158723_31159142_31159708_31161446_31162006_31162476
transcript_80339.known	chr6	-	1536	8	FSM	ENSG00000204525.18	ENST00000376228.10	1542	8	6	0	0	0	multi-exon	FALSE	canonical	3	558	junction_7	145.034408303122	4616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	1	True	NA	-10	True	AATAAA	-21	NA	31272086	31268748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_8034.nic	chr1	-	1095	5	ISM	ENSG00000158764.7	ENST00000368029.4	1161	8	3324	0	-11	0	3prime_fragment	FALSE	canonical	3	86	junction_4	6.22494979899437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	3354	False	NA	-5	True	ACTAAA	-17	NA	160951485	160945024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042
transcript_80340.known	chr6	-	1538	8	FSM	ENSG00000204525.18	ENST00000376237.8	1538	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	315.004697081922	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	983	False	NA	-10	True	AATAAA	-21	NA	31272105	31268748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271332_31271598_31271869_31271998
transcript_80341.known	chr6	-	1554	8	FSM	ENSG00000204525.18	ENST00000383329.7	1554	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	319.005917672704	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	1	True	NA	-10	True	AATAAA	-21	NA	31272086	31268748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_80342.known	chr6	-	1536	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_7	122.365961653675	2536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGCATGTTCGCTGTG	-3	True	NA	-9	True	AATAAA	-18	NA	31357179	31353874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
transcript_80343.known	chr6	-	917	3	FSM	ENSG00000234745.13	ENST00000497377.5	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_2	18.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCATGTTCGCTGTGCTG	2135	False	NA	-6	True	AATAAA	-21	NA	31355076	31353871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31354297_31354478_31354527_31354632
transcript_80344.nnic	chr6	-	1827	3	Genic_Genomic	ENSG00000272221.1	novel	1207	1	NA	NA	-5125	-18	multi-exon	FALSE	canonical	2	2	junction_2	1	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTTCTCCAAGGAGT	2747	False	NA	-29	True	AATAAA	-1	NA	31400620	31394306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr6_-_31395218_31398058_31398408_31400053
transcript_80347.nnic	chr6	-	1718	2	Genic_Genomic	ENSG00000272221.1	novel	1207	1	NA	NA	-5138	-18	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTTCTCCAAGGAGT	2734	False	NA	-29	True	AATAAA	-1	NA	31400633	31394306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr6_-_31395445_31400053
transcript_80351.known	chr6	+	2260	6	FSM	ENSG00000204520.14	ENST00000616296.4	2260	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.1809090751257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTCATTGTTTTTG	NA	False	NA	6	True	NA	NA	NA	31399783	31415313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31400784_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_80353.known	chr6	+	1370	6	FSM	ENSG00000204520.14	ENST00000449934.7	1370	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.0876161703348	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCATTGTTTTTGTT	7	True	NA	8	True	NA	NA	NA	31403594	31415315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31403703_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_80356.nic	chr6	+	1624	5	NIC	ENSG00000204520.14	novel	1370	6	NA	NA	-36	0	intron_retention	FALSE	canonical	3	48	junction_1	8.52936105461599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGGCTGCAAAATGTT	2845	False	NA	15	True	AATAAA	-18	NA	31403558	31415259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31403703_31410542_31411360_31411946_31412226_31412324_31412461_31415011
transcript_80359.known	chr6	+	9148	2	FSM	ENSG00000206337.12	ENST00000414046.3	9148	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAATGATTAAGACTT	NA	False	NA	NA	False	TATAAA	-22	NA	31463169	31472408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31463280_31463370
transcript_80360.known	chr6	+	2411	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.6698549067321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-4	NA	31494880	31511123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_80361.known	chr6	+	2416	6	FSM	ENSG00000204516.10	ENST00000252229.7	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	10.6207344378814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	-4	True	NA	NA	False	AATAGA	-1	NA	31498144	31511124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31498264_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_80391.known	chr6	-	2003	11	FSM	ENSG00000198563.14	ENST00000458640.5	2003	11	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_10	338.730512354585	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	5083	False	NA	-2	True	ACTAAA	-32	NA	31542448	31530218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_80396.known	chr6	-	1681	11	FSM	ENSG00000198563.14	ENST00000396172.6	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_10	255.532561525924	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-7	True	NA	-9	True	ACTAAA	-25	NA	31542003	31530225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_8040.known	chr1	-	4639	10	FSM	ENSG00000158769.18	ENST00000368026.11	4639	10	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_3	109.914557163932	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCAGCTTATTACCC	-7	True	NA	-7	True	ATTAAA	-18	NA	161021152	160995210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_80422.known	chr6	+	1411	4	FSM	ENSG00000204498.11	ENST00000376146.8	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	19.1891172861657	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	15	False	NA	31	True	NA	NA	NA	31546869	31558829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31546974_31548162_31548440_31557627_31557850_31558021
transcript_80423.known	chr6	+	1401	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	26.0426999794995	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	11	True	NA	31	True	NA	NA	NA	31547612	31558829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
transcript_80424.known	chr6	+	1451	4	FSM	ENSG00000204498.11	ENST00000376148.9	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	17.9691092959247	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	6	True	NA	31	True	NA	NA	NA	31547607	31558829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31547752_31548162_31548440_31557627_31557850_31558021
transcript_80425.known	chr6	-	662	3	FSM	ENSG00000213760.11	ENST00000483251.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTTGTTCTTTAAC	683	False	NA	NA	False	TATAAA	-20	NA	31546848	31545237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31545582_31546108_31546210_31546631
transcript_80426.known	chr6	-	4027	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_9	355.807931264351	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	5514	False	NA	-2	True	ACTAAA	-32	NA	31542017	31530218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_80427.known	chr6	-	1370	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTGCCTCATCATTT	-15	True	NA	0	True	AATAAA	-38	NA	31546608	31544443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31545582_31546108_31546210_31546477
transcript_80429.known	chr6	+	607	6	FSM	ENSG00000204472.13	ENST00000337917.11	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	34.1853769907544	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	-40	True	NA	14	True	AATAAA	-22	NA	31615226	31617021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31615294_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_80430.known	chr6	+	655	6	FSM	ENSG00000204472.13	ENST00000376059.8	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33.7283263741325	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	-33	True	NA	8	True	AATAAA	-16	NA	31615233	31617015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31615355_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_80431.nic	chr6	+	689	5	ISM	ENSG00000204472.13	ENST00000376059.8	655	6	132	0	86	0	3prime_fragment	FALSE	canonical	3	16	junction_1	31.1568612026308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	99	False	NA	8	True	AATAAA	-16	NA	31615365	31617015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_80432.known	chr6	+	524	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	-6	True	NA	14	True	AATAAA	-22	NA	31615990	31617021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31616146_31616343_31616507_31616815
transcript_80433.nic	chr6	+	3526	16	ISM	ENSG00000204469.13	ENST00000376007.8	6861	31	11087	0	-2147	0	3prime_fragment	FALSE	canonical	3	420	junction_1	80.6520647941239	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	2002	False	NA	30	True	AATAAA	-19	NA	31631806	31637771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
transcript_80434.nic	chr6	-	3752	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_14	81.6837413442847	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	2	True	NA	-13	True	AATAAA	-31	NA	31652393	31639027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_80435.known	chr6	-	3887	26	FSM	ENSG00000204463.14	ENST00000676615.2	3843	26	-44	0	0	0	multi-exon	FALSE	canonical	3	112	junction_25	82.7801908671392	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_80439.known	chr6	-	3644	25	FSM	ENSG00000204463.14	ENST00000375976.8	3644	25	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_24	68.2463750563598	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	2	True	NA	-13	True	AATAAA	-31	NA	31652393	31639027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_80441.known	chr6	-	3779	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_24	69.6828006636741	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_80452.nic	chr6	-	3496	24	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_23	74.2825546181936	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	2	True	NA	-14	True	AATAAA	-30	NA	31652393	31639028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_80462.known	chr6	+	709	6	FSM	ENSG00000204444.11	ENST00000375920.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.77493455452533	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-21	True	NA	10	True	AATAAA	-20	NA	31652416	31658210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_80463.nnic	chr6	+	568	5	NIC	ENSG00000204444.11	novel	709	6	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	10.9630059746403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-2	True	NA	10	True	AATAAA	-20	NA	31652402	31658210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31652552_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_80465.known	chr6	-	609	4	FSM	ENSG00000204463.14	ENST00000464126.1	609	4	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_2	66.0824400948459	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8748	False	NA	-13	True	AATAAA	-31	NA	31640539	31639027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384
transcript_80466.known	chr6	+	761	6	FSM	ENSG00000204444.11	ENST00000375916.4	761	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.09945053286186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-1	True	NA	10	True	AATAAA	-20	NA	31655893	31658210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31656081_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_80467.known	chr6	-	2481	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTTTAGGTGGTAGA	-16	True	NA	30	True	NA	NA	NA	31660778	31658297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31658300_31660800
transcript_80480.known	chr6	+	1061	7	FSM	ENSG00000204435.15	ENST00000375885.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	414.830788796267	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	-17	True	NA	17	True	AATAAA	-20	NA	31665235	31670070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31665494_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_80483.known	chr6	+	929	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_6	58.7038234605625	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	-11	True	NA	14	True	AATAAA	-17	NA	31666079	31670067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_80485.known	chr6	+	908	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	417.786395448945	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	158	False	NA	17	True	AATAAA	-20	NA	31666291	31670070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_80486.known	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375866.2	936	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	418.894842280123	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	221	False	NA	17	True	AATAAA	-20	NA	31666354	31670070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666488_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_80489.known	chr6	+	1792	5	FSM	ENSG00000204435.15	ENST00000468255.5	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_4	50.0368614123628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCAGCTCCATCTTTT	-10	True	NA	NA	False	GGGGCT	-2	NA	31666080	31670343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31669509_31669835
transcript_8049.nnic	chr1	-	564	4	NNC	ENSG00000215845.11	novel	567	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_3	546.083225240337	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-45	True	NA	-15	True	AATAAA	-16	NA	161039000	161037630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_161037827_161037912_161038076_161038550_161038635_161038879
transcript_80494.nnic	chr6	-	1723	4	NNC	ENSG00000204438.11	novel	1800	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	80.8675185445649	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-10	True	NA	-8	True	AATAAA	-28	NA	31665869	31662075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_31662711_31663852_31664578_31664840_31664908_31665573
transcript_80498.known	chr6	-	1800	4	FSM	ENSG00000204438.11	ENST00000375895.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	64.5101197918246	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	9	True	NA	-8	True	AATAAA	-28	NA	31665850	31662075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665573
transcript_80499.known	chr6	-	2793	4	FSM	ENSG00000204438.11	ENST00000375906.5	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	74.7187318474349	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTACACTTTTCTTT	2319	False	NA	NA	False	TTTAAA	-17	NA	31666283	31661228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665860
transcript_8050.known	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_3	212.675548403875	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-9	True	NA	-15	True	AATAAA	-16	NA	161038964	161037630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
transcript_80502.nnic	chr6	-	1726	4	NNC	ENSG00000204438.11	novel	1814	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	80.8551516945925	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-10	True	NA	-8	True	AATAAA	-28	NA	31665869	31662075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_31662711_31663852_31664581_31664840_31664908_31665573
transcript_80505.known	chr6	-	1598	4	FSM	ENSG00000204438.11	ENST00000375893.6	1598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.8551516945925	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	6	True	NA	-8	True	AATAAA	-28	NA	31665630	31662075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665558
transcript_80506.known	chr6	-	1814	4	FSM	ENSG00000204438.11	ENST00000375900.8	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	65.1272259163213	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-2	True	NA	-8	True	AATAAA	-28	NA	31665861	31662075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665573
transcript_80509.nic	chr6	-	2348	3	ISM	ENSG00000204438.11	ENST00000375900.8	1814	4	36	0	25	0	intron_retention	FALSE	canonical	3	95	junction_2	51.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-3	True	NA	-8	True	AATAAA	-28	NA	31665825	31662075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_31662711_31663852_31664581_31664840
transcript_8051.known	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	579.921259022867	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	5	True	NA	-15	True	AATAAA	-16	NA	161038950	161037630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
transcript_80515.known	chr6	-	836	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTAAACTGTTTGGT	-16	True	NA	-17	True	AATAAA	-2	NA	31681476	31676699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31677121_31679100_31679269_31681229
transcript_80517.known	chr6	-	1977	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	23.2023496756452	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	-1	True	NA	-4	True	AATAAA	-22	NA	31703324	31686954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
transcript_80518.known	chr6	-	1892	19	FSM	ENSG00000204427.12	ENST00000495769.5	1892	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	61.8619779912319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTAATAAAAAGGTAT	-17	True	NA	-38	True	NA	NA	NA	31703340	31686988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702073_31702131_31703149
transcript_80519.nic	chr6	-	2154	19	NIC	ENSG00000204427.12	novel	1977	20	NA	NA	-4	0	intron_retention	FALSE	canonical	3	224	junction_16	23.543825695818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-37	True	NA	-8	True	AATAAA	-18	NA	31703360	31686958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
transcript_80520.nic	chr6	-	1873	18	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	59.6438100983244	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-25	True	NA	-8	True	AATAAA	-18	NA	31703348	31686958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
transcript_80525.nic	chr6	-	2018	17	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	-8	0	intron_retention	FALSE	canonical	3	26	junction_16	61.1598507498996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-25	True	NA	-8	True	AATAAA	-18	NA	31703348	31686958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
transcript_80527.known	chr6	+	402	3	FSM	ENSG00000244355.8	ENST00000375825.8	525	3	8	115	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	9	False	NA	NA	False	NA	NA	NA	31715355	31717804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31715411_31715501_31715625_31717580
transcript_80529.known	chr6	+	493	2	FSM	ENSG00000244355.8	ENST00000479334.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	9	False	NA	NA	False	NA	NA	NA	31715355	31717804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31715625_31717580
transcript_8053.known	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	500	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-22	True	NA	-15	True	AATAAA	-16	NA	161038977	161037630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161037827_161037912_161038076_161038879
transcript_80540.known	chr6	-	1261	7	FSM	ENSG00000213722.10	ENST00000436437.2	1261	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	241.668793094093	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	3	True	NA	-5	True	AATAAA	-20	NA	31729501	31727037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729361
transcript_80541.known	chr6	-	1235	7	FSM	ENSG00000213722.10	ENST00000416410.6	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	231.714383575029	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	7	True	NA	-5	True	AATAAA	-20	NA	31729796	31727037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729682
transcript_80542.known	chr6	-	1688	7	FSM	ENSG00000213722.10	ENST00000375792.7	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_6	47.0841445357847	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	7437	False	NA	-5	True	AATAAA	-20	NA	31730617	31727037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31730050
transcript_80546.known	chr6	-	1098	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	1084.24705056858	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGGATTTAAAGTGTGG	-18	True	NA	-7	True	AATAAA	-31	NA	31736545	31730582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
transcript_80548.known	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	1117.070573718	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1482	False	NA	-5	True	AATAAA	-33	NA	31736572	31730580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
transcript_80552.known	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	236.635077704046	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	10	True	NA	-5	True	AATAAA	-20	NA	31730227	31727037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
transcript_80558.known	chr6	+	916	5	FSM	ENSG00000228727.9	ENST00000415669.3	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	7.29297607290741	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGTTTGTTTCTCAT	7694	False	NA	34	True	AATAAA	-38	NA	31762995	31764851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31763169_31763414_31763556_31764063_31764160_31764265_31764356_31764435
transcript_8056.known	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	89	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	18	True	NA	-15	True	AATAAA	-16	NA	161038937	161037630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161038076_161038550_161038674_161038879
transcript_80560.known	chr6	-	1193	6	FSM	ENSG00000213722.10	ENST00000375789.7	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_4	37.8597411507263	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGTGACTGGTGT	-17	True	NA	-7	True	AATAAA	-18	NA	31729299	31727039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864
transcript_80561.known	chr6	-	1254	6	FSM	ENSG00000213719.8	ENST00000375784.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	3	2724	junction_2	248.024514917377	2194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1487	False	NA	-5	True	AATAAA	-33	NA	31736567	31730580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
transcript_80562.known	chr6	-	4111	30	FSM	ENSG00000204394.13	ENST00000375663.8	4111	30	0	0	0	0	multi-exon	TRUE	canonical	3	531	junction_25	88.5488102431736	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTCGTCTGTGGTG	-53	True	NA	-1	True	AATAAA	-17	NA	31795752	31777517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
transcript_80564.known	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	424.092265904485	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8948	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
transcript_80565.nnic	chr6	-	688	5	NNC	ENSG00000204392.11	novel	820	5	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	409.924611971519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8903	False	NA	-6	True	AATAAA	-15	NA	31806704	31797395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806662
transcript_80566.known	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_3	61.9213210453395	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-2	True	NA	-6	True	AATAAA	-15	NA	31806966	31797395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
transcript_80568.known	chr6	-	713	4	FSM	ENSG00000204392.11	ENST00000470086.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	468.175892872184	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-11	True	NA	-6	True	AATAAA	-15	NA	31806852	31797395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31806074_31806143_31806754
transcript_80570.known	chr6	-	767	5	FSM	ENSG00000204392.11	ENST00000493387.5	767	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	424.092265904485	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8947	False	NA	-6	True	AATAAA	-15	NA	31806660	31797395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806122_31806518
transcript_80571.known	chr6	-	641	4	FSM	ENSG00000204392.11	ENST00000470083.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	444.697899952566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	24	True	NA	-6	True	AATAAA	-15	NA	31806817	31797395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806754
transcript_80572.known	chr6	-	2762	2	FSM	ENSG00000204390.10	ENST00000375654.5	2762	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTTCATGAACTCA	-18	True	NA	0	True	ATTAAA	-18	NA	31815283	31809618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31811986_31814888
transcript_80573.known	chr6	+	2400	1	FSM	ENSG00000204389.10	ENST00000375651.7	2400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTTTTATTCCTTT	0	True	NA	14	True	AATAAA	-14	NA	31815542	31817942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31815500_31817900
transcript_80574.known	chr6	+	962	5	FSM	ENSG00000204387.14	ENST00000375642.6	962	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	258.400367646797	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	-2	True	NA	16	True	AATAAA	-16	NA	31834917	31839761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31835410_31835452_31836298_31836518_31837235_31837436_31839542
transcript_80575.known	chr6	+	847	5	FSM	ENSG00000204387.14	ENST00000375638.7	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	236.845941489399	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_80579.known	chr6	+	1053	4	FSM	ENSG00000204387.14	ENST00000375640.7	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	157.073938711112	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	-7	True	NA	16	True	AATAAA	-16	NA	31834607	31839761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31835410_31835452_31837235_31837436_31839542
transcript_80580.known	chr6	+	602	4	FSM	ENSG00000204387.14	ENST00000375641.6	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	271.146127064766	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	12	True	NA	16	True	AATAAA	-16	NA	31834626	31839761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31834769_31835410_31835452_31837235_31837436_31839542
transcript_80581.known	chr6	+	610	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	260.750625864808	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
transcript_80584.known	chr6	+	2517	1	FSM	ENSG00000204388.7	ENST00000375650.5	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTTAATATGTG	-1	True	NA	9	True	AATAAA	-13	NA	31827737	31830254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31827700_31830300
transcript_80585.known	chr6	+	712	3	FSM	ENSG00000204387.14	ENST00000648677.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	337	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835201_31837235_31837436_31839542
transcript_80586.known	chr6	+	586	3	FSM	ENSG00000204387.14	ENST00000375633.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	172.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGGTTTGGTCTCAGAA	21	False	NA	19	True	AATAAA	-19	NA	31835287	31839764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31835452_31837235_31837436_31839542
transcript_80587.known	chr6	-	1875	6	FSM	ENSG00000204386.12	ENST00000491768.5	1875	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	114.45802724143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTCTTTTTTTGTTG	6	True	NA	-4	True	NA	NA	NA	31862822	31859051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31859946_31860041_31860179_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_80590.known	chr6	-	3353	6	FSM	ENSG00000204386.12	ENST00000375631.5	3353	6	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	34.6444800798049	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	7	True	NA	NA	False	NA	NA	NA	31862821	31857658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31859946_31860041_31860265_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_80597.known	chr6	-	2585	21	FSM	ENSG00000204385.13	ENST00000229729.11	2585	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.2649655434629	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	0	True	NA	-22	True	ATTAAA	-23	NA	31878997	31863191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874720_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
transcript_806.known	chr1	+	1100	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	285.335767123577	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	-6	True	NA	15	True	ATTAAA	-20	NA	11736146	11750771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
transcript_8060.known	chr1	-	813	2	FSM	ENSG00000215845.11	ENST00000486084.1	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGCTGGGAGGTGAT	39	True	NA	NA	False	NA	NA	NA	161038916	161037897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161038674_161038879
transcript_80603.nic	chr6	-	1309	11	NIC	ENSG00000204356.14	novel	1445	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	235.082198390265	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	NA	False	NA	-30	True	AGTAAA	-20	NA	31958991	31952227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954878_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_80610.known	chr6	-	1445	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	0	0	0	multi-exon	TRUE	canonical	3	637	junction_10	94.5640523666367	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTCGCAGCTGTTTT	-13	True	NA	-3	True	NA	NA	NA	31958971	31952086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_80616.known	chr6	-	1543	10	FSM	ENSG00000204356.14	ENST00000481121.5	1543	10	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_9	99.4109813344408	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-4	True	NA	-30	True	AGTAAA	-20	NA	31958962	31952227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_80618.known	chr6	+	3795	28	FSM	ENSG00000204351.12	ENST00000375394.7	3795	28	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	19.3224746006136	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	17	True	NA	21	True	GATAAA	-9	NA	31959174	31969751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279_31969421_31969514
transcript_80623.known	chr6	+	1889	8	FSM	ENSG00000204344.16	ENST00000466132.5	1889	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	30.5447146301408	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	31971090	31981446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31971275_31971868_31972512_31972620_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_80625.known	chr6	+	1405	7	FSM	ENSG00000204344.16	ENST00000492583.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	31.5950945559592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGGCTCTCGTGTGTGCA	101	False	NA	NA	False	NA	NA	NA	31971898	31981164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31972512_31972620_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_8063.known	chr1	-	1807	11	FSM	ENSG00000158773.14	ENST00000368021.7	1807	11	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	3.78021163428716	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-2	True	NA	NA	False	GATAAA	-15	NA	161045977	161039250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_80631.nic	chr6	-	1385	7	NIC	ENSG00000204348.10	novel	1469	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	39.5070317229168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTCTCTCGCTGTCTTC	16	True	NA	-7	True	AATAAA	-14	NA	31972129	31969816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971148_31971319_31971682_31971928
transcript_80632.known	chr6	-	1469	7	FSM	ENSG00000204348.10	ENST00000337523.10	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	21.1220001157298	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	7	True	NA	-5	True	AATAAA	-16	NA	31972138	31969814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971682_31971928
transcript_80633.known	chr6	-	1667	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_6	40.4162371111194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCGCTGTCTTCTTAG	6	True	NA	-3	True	AATAAA	-18	NA	31972290	31969812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
transcript_80635.nic	chr6	+	1089	6	NIC	ENSG00000204344.16	novel	1211	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	34.1607962436475	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-13	True	NA	NA	False	AATAAA	-17	NA	31972344	31981446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31972512_31972620_31972758_31978902_31978999_31980450_31980549_31980653_31980802_31981003
transcript_80636.known	chr6	+	1128	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	17.6680502602862	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-22	True	NA	NA	False	AATAAA	-17	NA	31972554	31981446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_80637.nic	chr6	+	1152	6	ISM	ENSG00000204344.16	ENST00000375333.3	1557	8	599	0	8	0	3prime_fragment	FALSE	canonical	3	6	junction_2	34.5404111150982	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-34	True	NA	NA	False	AATAAA	-17	NA	31972542	31981446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_80638.known	chr6	+	1039	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	35.9888871736818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	23	True	NA	NA	False	NA	NA	NA	31972380	31981429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_8065.known	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	4.10365690573664	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	13	True	NA	NA	False	NA	NA	NA	161045962	161039919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_80654.nic	chr6	+	975	5	NIC	ENSG00000204344.16	novel	1128	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	38.0550587964334	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-9	True	NA	NA	False	AATAAA	-17	NA	31972567	31981446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_31972758_31978902_31978999_31980450_31980549_31980653_31980802_31981003
transcript_80664.known	chr6	+	543	3	FSM	ENSG00000204344.16	ENST00000463823.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	39.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGCCTATCTTACCTG	16	True	NA	NA	False	AATAAA	-32	NA	31972373	31979722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_31972512_31978902_31978999_31979413
transcript_80665.known	chr6	-	1533	6	FSM	ENSG00000204348.10	ENST00000375356.7	1533	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	22.2207110597298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGCAGATAATAAAAGCATA	0	True	NA	-34	True	NA	NA	NA	31971984	31969843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319
transcript_80666.known	chr6	-	2626	18	FSM	ENSG00000213676.13	ENST00000375203.8	2626	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	16.7499418993983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCTGCCTTCCTGGCT	-23	True	NA	-2	True	AATAAA	-24	NA	32128246	32115263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_80667.known	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	8.66614336463034	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	1	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_8067.nic	chr1	-	2058	10	NIC	ENSG00000158773.14	novel	1807	11	NA	NA	-6	0	intron_retention	FALSE	canonical	2	9	junction_1	3.55902608401044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-8	True	NA	NA	False	GATAAA	-15	NA	161045983	161039250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_161040010_161040201_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_80672.known	chr6	-	1020	7	FSM	ENSG00000213676.13	ENST00000485314.5	1020	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.15304987242334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTCCAGCCTGGGCG	-1	True	NA	NA	False	NA	NA	NA	32127767	32120508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670
transcript_80673.known	chr6	-	1342	2	FSM	ENSG00000204315.4	ENST00000375156.4	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTTGTGAATTGTGG	-23	True	NA	-12	True	ATTAAA	-20	NA	32130288	32128706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32129855_32130094
transcript_8068.nic	chr1	-	2027	10	NIC	ENSG00000158773.14	novel	1807	11	NA	NA	-6	0	intron_retention	FALSE	canonical	2	4	junction_6	4.15739709641549	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-8	True	NA	NA	False	GATAAA	-15	NA	161045983	161039250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_161040010_161040201_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_80682.known	chr6	+	1759	9	FSM	ENSG00000221988.13	ENST00000361568.6	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	50.5184062990906	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	-21	True	NA	18	True	AATAAA	-18	NA	32153522	32163678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32153637_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_80684.known	chr6	+	1754	9	FSM	ENSG00000221988.13	ENST00000375143.6	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	66.392300005347	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	-39	True	NA	18	True	AATAAA	-18	NA	32154137	32163678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32154247_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_80687.known	chr6	+	1906	9	FSM	ENSG00000221988.13	ENST00000324816.11	1906	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	45.4049487941568	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	-36	True	NA	15	True	AATAAA	-15	NA	32154140	32163675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_80689.known	chr6	+	1945	9	FSM	ENSG00000221988.13	ENST00000375137.6	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	62.4168196482326	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	47	False	NA	18	True	AATAAA	-18	NA	32154094	32163678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32154395_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_80691.known	chr6	+	1298	9	FSM	ENSG00000241404.7	ENST00000333845.11	1298	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	21.3834047803431	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	-6	True	NA	15	True	AATAAA	-17	NA	32164594	32168281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32164658_32166137_32166267_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
transcript_807.known	chr1	+	1130	5	FSM	ENSG00000177674.16	ENST00000314340.10	1130	5	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_4	104.505980690102	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTGTGTTTTGAACC	-17	True	NA	13	True	ATTAAA	-18	NA	11736135	11750769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748611_11750076
transcript_80704.nic	chr6	-	2298	7	NIC	ENSG00000204310.13	novel	2196	7	NA	NA	-55	0	intron_retention	FALSE	canonical	2	13	junction_5	175.01182499731	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-42	True	NA	-30	True	AATAAA	-13	NA	32176139	32168211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171249_32171506_32175813
transcript_80706.known	chr6	-	2196	7	FSM	ENSG00000204310.13	ENST00000375107.8	2196	7	0	0	0	0	multi-exon	TRUE	canonical	3	333	junction_6	62.5639672655115	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	13	True	NA	-30	True	AATAAA	-13	NA	32176084	32168211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32175813
transcript_80707.known	chr6	-	2496	7	FSM	ENSG00000204310.13	ENST00000395499.5	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	142.577951388783	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	16	True	NA	-30	True	AATAAA	-13	NA	32177080	32168211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32176509
transcript_80708.known	chr6	-	2017	7	FSM	ENSG00000204310.13	ENST00000375104.6	2017	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	159.449835371505	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	15	True	NA	-30	True	AATAAA	-13	NA	32177325	32168211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32177233
transcript_80709.known	chr6	-	2021	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	180.795848649489	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	2	True	NA	-30	True	AATAAA	-13	NA	32178096	32168211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
transcript_80717.known	chr6	-	2782	3	FSM	ENSG00000204314.12	ENST00000495191.5	2782	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCCGCAATTCCAAAGAC	2	True	NA	-31	True	ATTAAA	-18	NA	32151923	32148358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32149399_32149536_32149723_32150367
transcript_80718.known	chr6	-	567	3	FSM	ENSG00000284954.1	ENST00000485392.5	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	31	True	NA	-5	True	AATAAA	-19	NA	32154333	32152801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32153173_32153736_32153837_32154237
transcript_80719.known	chr6	+	1312	9	FSM	ENSG00000241404.7	ENST00000395512.5	1312	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.7509101780889	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	4	True	NA	15	True	AATAAA	-17	NA	32164604	32168281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32164682_32166137_32166267_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
transcript_80722.known	chr6	+	1117	6	FSM	ENSG00000204308.8	ENST00000375094.4	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_4	187.527704619877	1331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGGATCTCTTCCCAA	-17	True	NA	14	True	AATAAA	-15	NA	32178404	32180793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32178652_32179540_32179560_32179650_32179764_32179876_32179932_32180008_32180127_32180228
transcript_80730.known	chr6	-	1420	11	FSM	ENSG00000204305.16	ENST00000375076.9	1420	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	7.06823881882892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTCTGTGTGTG	0	True	NA	-8	True	ATTAAA	-17	NA	32184253	32180968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32181240_32181350_32181478_32181605_32181633_32182246_32182389_32182567_32182699_32182840_32183024_32183113_32183202_32183323_32183389_32183554_32183751_32183880_32183988_32184170
transcript_80732.known	chr6	-	557	2	FSM	ENSG00000204305.16	ENST00000469940.5	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGTCTGTGTGTGT	8879	False	NA	-7	True	ATTAAA	-18	NA	32181635	32180967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32181240_32181350
transcript_80733.known	chr6	-	1417	4	FSM	ENSG00000213654.10	ENST00000472768.5	1417	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	44.0302926025556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	8	True	NA	0	True	AATAAA	-18	NA	32192885	32190765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32191504_32191708_32191871_32192147_32192251_32192471
transcript_80734.known	chr6	-	1213	4	FSM	ENSG00000213654.10	ENST00000375040.8	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	4.08248290463863	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	8	True	NA	0	True	AATAAA	-18	NA	32192643	32190765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471
transcript_80736.known	chr6	-	1460	4	FSM	ENSG00000213654.10	ENST00000487761.5	1460	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	46.4781908234628	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	25	True	NA	0	True	AATAAA	-18	NA	32192868	32190765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32191504_32191708_32191909_32192147_32192273_32192471
transcript_80737.known	chr6	-	1456	8	FSM	ENSG00000213654.10	ENST00000375043.3	1456	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.9544852236079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	884	False	NA	0	True	AATAAA	-18	NA	32195523	32190765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471_32192531_32193040_32193125_32194309_32194391_32194736_32194830_32195425
transcript_80743.known	chr6	+	1235	5	FSM	ENSG00000204287.14	ENST00000395388.7	1235	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.54950975679639	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	-6	True	NA	27	True	AATAAA	-25	NA	32439886	32445046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32440033_32442447_32442694_32443184_32443467_32443755_32443922_32444651
transcript_80744.known	chr6	-	1229	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	29.7563438614357	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	-5	True	NA	-27	True	ATTAAA	-24	NA	32589848	32578768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
transcript_80745.nnic	chr6	-	846	5	NNC	ENSG00000196126.11	novel	1229	6	NA	NA	5841	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	29.9363908980358	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	5836	False	NA	-27	True	ATTAAA	-24	NA	32584007	32578768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32583914
transcript_80746.known	chr6	-	1642	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-37	0	-10	0	multi-exon	FALSE	canonical	3	12	junction_4	1.11803398874989	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAAGCCCAAATATAT	-19	True	NA	-2	True	AATAAA	-22	NA	32666694	32659466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
transcript_80747.known	chr6	-	5643	12	FSM	ENSG00000204267.17	ENST00000374897.4	5643	12	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	3.19348510368187	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGAAGTTCCATATT	26	True	NA	-4	True	ATTAAA	-25	NA	32838739	32825414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_80751.known	chr6	-	2685	11	FSM	ENSG00000168394.12	ENST00000354258.5	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	17.6694651871527	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCTTATGTTTCC	9	True	NA	-5	True	AATAAA	-15	NA	32853704	32845208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32853038
transcript_80753.known	chr6	+	1017	6	FSM	ENSG00000240065.8	ENST00000374859.3	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.77174369109018	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTGATGGGACTCTTT	3	True	NA	NA	False	NA	NA	NA	32854191	32859851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32854290_32856137_32856206_32857262_32857395_32858004_32858135_32858363_32858506_32859404
transcript_80756.known	chr6	-	1124	6	FSM	ENSG00000204264.12	ENST00000374882.8	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	46.6021458733394	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-23	True	NA	NA	False	AATAAA	-19	NA	32844047	32840716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843849
transcript_80757.known	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	43.5642054902876	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-12	True	NA	NA	False	AATAAA	-19	NA	32844679	32840716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
transcript_80759.known	chr6	-	1153	5	FSM	ENSG00000204264.12	ENST00000484003.1	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	47.1858029496161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGTAGAAAGTACAGAT	16	True	NA	NA	False	NA	NA	NA	32844651	32841020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32843090_32844278
transcript_8076.nic	chr1	+	1092	5	NIC	ENSG00000162755.14	novel	1333	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	35.979160635012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	19	True	NA	19	True	ATTAAA	-19	NA	161098373	161100346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161098405_161098665_161099063_161099345_161099506_161099578_161099797_161100060
transcript_80765.nnic	chr6	+	1186	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-34	-16	-34	16	multi-exon	FALSE	canonical	3	82	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAATGTAAACTATGGAC	-33	True	NA	29	True	AATAAA	-35	NA	32894725	32901804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32895027_32900919
transcript_80766.nnic	chr6	+	1414	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-34	-244	-34	244	multi-exon	FALSE	canonical	3	82	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGATTGCCTTTTTAT	-33	True	NA	33	True	TATAAA	-29	NA	32894725	32902032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32895027_32900919
transcript_80768.nnic	chr6	+	2847	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-34	-1677	-34	1677	multi-exon	FALSE	canonical	3	82	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTGTGATATTCTGTT	-33	True	NA	16	True	AATAAA	-17	NA	32894725	32903465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32895027_32900919
transcript_8077.known	chr1	+	1038	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	21.569654610123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	6	True	NA	-29	True	TATAAA	-16	NA	161098360	161100298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_80770.nnic	chr6	+	1091	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-32	22	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAACTATGGACTTAATA	-31	True	NA	35	True	AATAAA	-41	NA	32894727	32901810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80771.nnic	chr6	+	1313	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-32	244	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGATTGCCTTTTTAT	-31	True	NA	33	True	TATAAA	-29	NA	32894727	32902032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80772.nnic	chr6	+	1441	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-32	372	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTACCTTGAATTTAT	-31	True	NA	NA	False	ATTAAA	-15	NA	32894727	32902160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80773.nnic	chr6	+	2749	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-32	1680	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGATATTCTGTTACA	-31	True	NA	19	True	AATAAA	-20	NA	32894727	32903468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80774.nnic	chr6	+	3038	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-32	1969	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCTTTTTCTTCCTCTT	-31	True	NA	18	True	AATAAA	-15	NA	32894727	32903757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_32894928_32900919
transcript_80776.known	chr6	+	4807	13	FSM	ENSG00000204256.14	ENST00000374831.8	4807	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	157.997077152993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTAGAAGTAATCTTTA	642	False	NA	20	True	AATAAA	-25	NA	32970887	32981505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_80777.known	chr6	-	1348	6	FSM	ENSG00000242574.9	ENST00000418107.3	1348	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.16653333119993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTTTCCATGTCTTC	6	True	NA	-8	True	AATAAA	-13	NA	32941028	32934635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32934988_32935341_32935378_32935535_32935653_32937171_32937457_32938683_32938966_32940752
transcript_80780.known	chr6	-	1007	5	FSM	ENSG00000204257.15	ENST00000395303.7	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	53.625437061156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	-43	True	NA	-16	True	AATAAA	-19	NA	32953108	32948612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949270_32949400_32949610_32949788_32950518_32950804_32952948
transcript_80783.known	chr6	-	1093	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	33.3504122913046	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-32	True	NA	-21	True	AATAAA	-14	NA	32953097	32948617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
transcript_80784.nnic	chr6	-	1119	5	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	34.1686991265398	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-15	True	NA	-21	True	AATAAA	-14	NA	32968521	32948617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32968346
transcript_80785.nic	chr6	-	1050	5	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	55.9508713068885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4159	False	NA	-21	True	AATAAA	-14	NA	32969107	32948617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32969001
transcript_80787.known	chr6	-	806	4	FSM	ENSG00000204257.15	ENST00000464392.1	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	64.2979177129572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCTCTGGGACATC	4822	False	NA	NA	False	NA	NA	NA	32968444	32948770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32968144
transcript_80788.nnic	chr6	-	825	4	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	54.9019327731021	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-6	True	NA	-21	True	AATAAA	-14	NA	32968512	32948617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32968346
transcript_8079.nic	chr1	+	1129	5	NIC	ENSG00000162755.14	novel	1347	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	31.4434015335491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	-10	True	NA	19	True	ATTAAA	-19	NA	161098394	161100346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161098482_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_80792.known	chr6	-	777	4	FSM	ENSG00000204257.15	ENST00000395305.7	777	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	63.3578899760892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	4	True	NA	-16	True	AATAAA	-19	NA	32953061	32948612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32952948
transcript_80793.known	chr6	+	2338	9	FSM	ENSG00000204256.14	ENST00000607833.5	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_5	47.6812332055286	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAAGAAACGGAA	17	False	NA	50	True	NA	NA	NA	32972216	32978203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125
transcript_80795.known	chr6	-	3464	5	FSM	ENSG00000204252.14	ENST00000229829.7	3464	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.54950975679639	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGCTTTTTTTTTAC	1	True	NA	NA	False	ATTAAA	-21	NA	33009591	33004181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_80799.known	chr6	+	3991	6	FSM	ENSG00000223865.11	ENST00000418931.7	3991	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	69.3668508727332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGGAGGACCTACTG	11	True	NA	10	True	AATAAA	-24	NA	33075989	33089696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33076142_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_8080.known	chr1	+	921	4	FSM	ENSG00000162755.14	ENST00000469647.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32.273139846559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATTTGTCTCTGAAATT	8	True	NA	16	True	ATTAAA	-16	NA	161098362	161100343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161098405_161098665_161099063_161099597_161099797_161100060
transcript_80800.nic	chr6	+	1117	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-56	-432	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	44.0390735597378	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	4351	False	NA	20	True	NA	NA	NA	33080329	33086769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_80802.nic	chr6	+	1009	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-22	-432	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	68.175068756841	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	2	True	NA	20	True	NA	NA	NA	33080420	33086769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33080535_33080688_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_80805.nic	chr6	-	1300	5	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-175	-7	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	9.86154146165801	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGAGACTCTGAGTCAT	NA	False	NA	-8	True	AATAAA	-18	NA	33080950	33065013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33080679
transcript_80808.nnic	chr6	+	746	3	FSM	ENSG00000224557.8	ENST00000686632.1	1092	3	-17	363	-17	5	multi-exon	FALSE	canonical	3	27	junction_1	59	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCCCTTGACTTG	4181	False	NA	22	True	TATAAA	-23	NA	33116638	33118786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116973_33117221_33118390
transcript_8081.known	chr1	+	1347	4	FSM	ENSG00000162755.14	ENST00000368011.9	1347	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	12.2836838484589	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	6	True	NA	19	True	ATTAAA	-19	NA	161098360	161100346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161099063_161099345_161099506_161099597_161099797_161100060
transcript_80810.nnic	chr6	+	1109	3	FSM	ENSG00000224557.8	ENST00000686632.1	1092	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	27	junction_1	59	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	4181	False	NA	7	True	AATAAA	-17	NA	33116638	33119149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116973_33117221_33118390
transcript_80812.nnic	chr6	+	746	3	FSM	ENSG00000224557.8	ENST00000684891.1	1085	3	-23	362	0	5	multi-exon	FALSE	canonical	3	69	junction_1	38	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCCCTTGACTTG	3	True	NA	22	True	TATAAA	-23	NA	33116655	33118786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116956_33117221_33118390
transcript_80813.nnic	chr6	+	911	3	FSM	ENSG00000224557.8	ENST00000684891.1	1085	3	-23	197	0	170	multi-exon	FALSE	canonical	3	69	junction_1	38	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCATGACTTTCACAG	3	True	NA	7	True	ATTAAA	-17	NA	33116655	33118951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116956_33117221_33118390
transcript_80814.nnic	chr6	+	1109	3	FSM	ENSG00000224557.8	ENST00000684891.1	1085	3	-23	-1	0	0	multi-exon	FALSE	canonical	3	69	junction_1	38	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	3	True	NA	7	True	AATAAA	-17	NA	33116655	33119149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116742_33116956_33117221_33118390
transcript_80815.nnic	chr6	+	836	3	NIC	ENSG00000224557.8	novel	727	3	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	55	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCCCTTGACTTG	4	True	NA	22	True	TATAAA	-23	NA	33116656	33118786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33116833_33116956_33117221_33118390
transcript_80817.nnic	chr6	+	1199	3	NIC	ENSG00000224557.8	novel	1092	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	55	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	4	True	NA	7	True	AATAAA	-17	NA	33116656	33119149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33116833_33116956_33117221_33118390
transcript_80823.nnic	chr6	+	1166	3	FSM	ENSG00000224557.8	ENST00000692641.1	727	3	-71	-368	-6	0	multi-exon	FALSE	canonical	3	28	junction_1	58.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	-5	True	NA	7	True	AATAAA	-17	NA	33116672	33119149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33116833_33116973_33117221_33118390
transcript_80825.known	chr6	+	1188	3	FSM	ENSG00000224557.8	ENST00000435074.6	1213	3	11	14	11	0	multi-exon	FALSE	canonical	0	0	junction_1	72.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	-7	True	NA	7	True	AATAAA	-17	NA	33112450	33119149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33112616_33116956_33117221_33118390
transcript_80828.known	chr6	-	1194	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	5.04975246918104	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	8211	False	NA	NA	False	AATAAA	-19	NA	33192454	33186444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
transcript_80829.known	chr6	-	2885	10	FSM	ENSG00000204231.11	ENST00000374680.4	2885	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	17.7451088722749	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	0	True	NA	-5	True	ATTAAA	-17	NA	33200665	33193587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_8083.known	chr1	-	598	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_1	137.463530517087	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	4	True	NA	-6	True	ATTAAA	-15	NA	161118037	161100560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
transcript_80830.known	chr6	-	2846	10	FSM	ENSG00000204231.11	ENST00000374685.8	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	17.5485217976886	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	7830	False	NA	-5	True	ATTAAA	-17	NA	33200614	33193587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33194830_33194944_33195051_33195362_33195467_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_80831.known	chr6	+	2153	8	FSM	ENSG00000112473.18	ENST00000374675.7	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	60.8809477251986	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	0	True	NA	24	True	AATAAA	-24	NA	33200825	33204439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33200939_33201241_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_80832.known	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_3	9.03081145609604	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	-27	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_80833.nic	chr6	+	2144	7	NIC	ENSG00000112473.18	novel	2413	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	119.66898790692	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	-4	True	NA	22	True	AATAAA	-22	NA	33200417	33204437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_33200939_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_80835.known	chr6	+	977	9	FSM	ENSG00000204228.4	ENST00000374662.4	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	7.17635004720366	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	-2	True	NA	34	True	AATAAA	-23	NA	33204654	33206831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33204721_33204901_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
transcript_80837.known	chr6	+	1741	7	FSM	ENSG00000204227.5	ENST00000374656.5	1741	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	16.303544263612	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	-6	True	NA	23	True	NA	NA	NA	33208499	33212716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33211548_33211728_33212003_33212297
transcript_80840.known	chr6	-	2936	20	FSM	ENSG00000223501.9	ENST00000445902.3	2936	20	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_10	25.7484098425181	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-5	True	NA	-10	True	AATAAA	-18	NA	33271876	33250277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
transcript_80841.nic	chr6	-	2863	20	NIC	ENSG00000223501.9	novel	2936	20	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	58.2453022608439	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	4592	False	NA	-10	True	AATAAA	-18	NA	33271908	33250277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271690
transcript_80846.nic	chr6	-	2732	18	NIC	ENSG00000223501.9	novel	2936	20	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	61.4204411270002	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	7	True	NA	-10	True	AATAAA	-18	NA	33271864	33250277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
transcript_8085.known	chr1	-	408	2	FSM	ENSG00000143256.5	ENST00000468311.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGCCTGAAGTTTTCT	-14	True	NA	-1	True	ATTAAA	-20	NA	161118055	161100555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161100860_161117951
transcript_80850.known	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_1	10175.6813118336	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	-1	True	NA	11	True	AATAAA	-19	NA	33272074	33276510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80858.known	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	21469	junction_4	2309.00058196181	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	56	False	NA	11	True	AATAAA	-19	NA	33272131	33276510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80859.known	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2623.01341208923	25883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	-1	True	NA	12	True	AATAAA	-20	NA	33272074	33276511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80860.known	chr6	+	639	5	FSM	ENSG00000231500.7	ENST00000474626.5	639	5	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2901.36858870086	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	12	False	NA	6	True	AATAAA	-14	NA	33272087	33276505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276268_33276390
transcript_80861.known	chr6	+	642	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2520.66236334817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	23	False	NA	6	True	AATAAA	-14	NA	33272098	33276505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
transcript_80862.known	chr6	+	413	3	FSM	ENSG00000231500.7	ENST00000479802.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	3	21469	junction_2	1722.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	3790	False	NA	11	True	AATAAA	-19	NA	33275865	33276510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33276067_33276175_33276268_33276390
transcript_80863.known	chr6	+	685	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11422.1853231138	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	20	False	NA	11	True	AATAAA	-19	NA	33272095	33276510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_80867.known	chr6	-	2070	15	FSM	ENSG00000227057.10	ENST00000374617.9	2070	15	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_13	46.8133506162331	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-19	True	NA	-10	True	ATTAAA	-21	NA	33289239	33279107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_8087.known	chr1	+	1485	7	FSM	ENSG00000158793.14	ENST00000368009.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	27.4089401473315	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTCCCAGCCCCATT	-5	True	NA	5	True	AATAAA	-14	NA	161118104	161121194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_80877.known	chr6	+	1703	1	FSM	ENSG00000235863.4	ENST00000451237.3	1703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGTGCAGTGTGGTCTT	0	True	NA	15	True	AATAAA	-15	NA	33277122	33278825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33277100_33278800
transcript_80878.known	chr6	-	2896	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_17	52.7407972588747	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-12	True	NA	-6	True	AATAAA	-23	NA	33298942	33291653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
transcript_80879.nic	chr6	-	3154	17	NIC	ENSG00000237441.10	novel	2687	17	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_16	51.0231258842498	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	7566	False	NA	-6	True	AATAAA	-23	NA	33297741	33291653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33297213
transcript_8088.known	chr1	+	2081	7	FSM	ENSG00000158793.14	ENST00000368008.5	2081	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	75.4860178370067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTTGTAATTCTATGC	8	True	NA	NA	False	AATAAA	-20	NA	161118117	161125445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161124140
transcript_80880.nic	chr6	-	2730	17	NIC	ENSG00000237441.10	novel	2687	17	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	59.3519363100312	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	7273	False	NA	-6	True	AATAAA	-23	NA	33298034	33291653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33297930
transcript_80899.known	chr6	+	884	5	FSM	ENSG00000204220.12	ENST00000395131.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	89.0347544501584	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289301	33290933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289621_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80900.nnic	chr6	+	531	5	NNC	ENSG00000204220.12	novel	884	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	104.28176973949	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	-24	True	NA	24	True	AATAAA	-17	NA	33289585	33290933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33289621_33289838_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80901.known	chr6	+	598	5	FSM	ENSG00000204220.12	ENST00000374607.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	91.9904886387718	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCCTGACCAGGCAC	-13	True	NA	25	True	AATAAA	-18	NA	33289596	33290934	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80907.known	chr6	+	805	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	105.422957651548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	-14	True	NA	-34	True	NA	NA	NA	33289595	33290875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
transcript_8091.nic	chr1	+	1440	7	NIC	ENSG00000158793.14	novel	1518	7	NA	NA	-4	-128	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	79.6445227244159	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGGACATCGCCT	2592	False	NA	11	True	CATAAA	-2	NA	161118081	161121065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161118240_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_80910.known	chr6	+	734	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	23.1564725772779	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	-9	True	NA	24	True	AATAAA	-17	NA	33289600	33290933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
transcript_80911.nic	chr6	+	981	3	ISM	ENSG00000204220.12	ENST00000374606.10	734	4	17	1	-9	-1	intron_retention	FALSE	canonical	3	255	junction_2	4.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTTTCCTGACCAGGC	8	True	NA	23	True	AATAAA	-16	NA	33289617	33290932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_33289921_33290173_33290245_33290325
transcript_80913.known	chr6	-	3450	8	FSM	ENSG00000231925.13	ENST00000434618.7	3450	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	17.7476644051192	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-8	True	NA	-15	True	AATAAA	-23	NA	33314078	33299693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
transcript_80914.known	chr6	-	2462	9	FSM	ENSG00000204209.13	ENST00000620164.4	2462	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	347.60895324344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	6275	False	NA	-1	True	AATAAA	-24	NA	33323016	33318558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33318803_33318996_33319050_33319201_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_80919.known	chr6	-	2606	8	FSM	ENSG00000204209.13	ENST00000266000.10	2606	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_7	238.4695248574	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	6281	False	NA	0	True	AATAAA	-25	NA	33323010	33318557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321975_33322861
transcript_8092.nnic	chr1	+	1330	7	NNC	ENSG00000158793.14	novel	1485	7	NA	NA	-4	-128	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	81.122164391463	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGGACATCGCCT	-9	True	NA	11	True	CATAAA	-2	NA	161118100	161121065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_161118179_161118815_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_80921.known	chr6	-	2558	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_7	154.550434275333	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-23	True	NA	0	True	AATAAA	-25	NA	33322959	33318557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_80928.nic	chr6	-	1472	6	NIC	ENSG00000204209.13	novel	2606	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	110	junction_5	381.574946766687	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-28	True	NA	0	True	AATAAA	-25	NA	33322964	33318557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33322861
transcript_8093.nic	chr1	+	1391	7	NIC	ENSG00000158793.14	novel	1518	7	NA	NA	-4	-128	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	80.3832832261921	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGGACATCGCCT	-9	True	NA	11	True	CATAAA	-2	NA	161118100	161121065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161118210_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_80933.nnic	chr6	+	2459	12	NNC	ENSG00000237649.8	novel	2391	11	NA	NA	-30	-26	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	160.783361254199	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTTTTATTAGCATTT	260	False	NA	19	True	AATAAA	-25	NA	33391792	33409870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409477_33409542_33409645
transcript_80938.known	chr6	+	2391	11	FSM	ENSG00000237649.8	ENST00000428849.7	2391	11	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_3	25.1045812552211	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	-25	True	NA	45	True	AATAAA	-23	NA	33391822	33409896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409645
transcript_8094.known	chr1	+	1518	7	FSM	ENSG00000158793.14	ENST00000392190.9	1518	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3394997718502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	8	True	NA	4	True	AATAAA	-13	NA	161118117	161121193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161118226_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_80941.nic	chr6	+	2365	10	ISM	ENSG00000237649.8	ENST00000428849.7	2391	11	-10	2806	-10	0	5prime_fragment	FALSE	canonical	3	373	junction_3	26.4565798485736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAAGGTGA	-35	True	NA	NA	False	TTTAAA	-36	NA	33391812	33407090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799
transcript_80958.known	chr6	-	855	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	0	0	0	multi-exon	TRUE	canonical	3	608	junction_5	627.165879173923	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTATTTCTCTTTA	0	True	NA	-1	True	NA	NA	NA	33418107	33416441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_80959.known	chr6	-	658	6	FSM	ENSG00000112514.18	ENST00000374484.8	658	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	912.051007345532	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	26	True	NA	-19	True	AATAAA	-16	NA	33418142	33416549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417246_33417311_33417480_33417696_33418086
transcript_80960.known	chr6	-	762	6	FSM	ENSG00000112514.18	ENST00000374496.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	867.550897642323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGATACTTCAACGCCTT	-10	True	NA	-88	True	NA	NA	NA	33418070	33416618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
transcript_80969.known	chr6	-	822	5	FSM	ENSG00000112514.18	ENST00000440279.7	822	5	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_3	82.592372529187	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGCCTTTTGCCTGT	-11	True	NA	-21	True	AATAAA	-14	NA	33417921	33416551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
transcript_80970.known	chr6	-	1378	2	FSM	ENSG00000112514.18	ENST00000487637.1	1378	2	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTCTCTCTGCCT	-1	True	NA	-30	True	AATAAA	-5	NA	33418108	33416560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33417311_33417480
transcript_80971.known	chr6	-	961	4	FSM	ENSG00000112514.18	ENST00000465956.1	961	4	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_3	87.7585070267012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGCCTTTTGCCTGTT	21	True	NA	-20	True	AATAAA	-15	NA	33417889	33416550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250
transcript_80972.known	chr6	+	2715	2	FSM	ENSG00000213588.6	ENST00000395064.3	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	-16	True	NA	27	True	AATAAA	-20	NA	33454575	33457544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_33454776_33455029
transcript_80973.known	chr6	-	422	1	FSM	ENSG00000274259.2	ENST00000614205.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTGGATATATACA	-5	True	NA	NA	False	ATTAAA	-32	NA	33454408	33453986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33454000_33454400
transcript_80978.known	chr6	-	2170	6	FSM	ENSG00000030110.14	ENST00000374467.4	2170	6	0	0	0	0	multi-exon	TRUE	canonical	3	406	junction_1	29.7011784277998	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-16	True	NA	-5	True	AATAAA	-17	NA	33580276	33572551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
transcript_80988.known	chr6	-	1284	4	FSM	ENSG00000137288.10	ENST00000607484.6	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_3	120.024997396376	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTATGCCGAAATGCAG	13	True	NA	-6	True	AATAAA	-23	NA	33711700	33696763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_33697751_33700443_33700514_33701345_33701421_33711548
transcript_81.known	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_4	247.395432455816	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
transcript_8100.nic	chr1	+	1281	6	NIC	ENSG00000158793.14	novel	1485	7	NA	NA	-2	-128	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	84.5600378429433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGGACATCGCCT	-26	True	NA	11	True	CATAAA	-2	NA	161118083	161121065	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161118179_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_81006.known	chr6	+	1773	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	8325.67495762356	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_81007.nic	chr6	+	1844	5	NIC	ENSG00000137309.20	novel	1920	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	1374	junction_1	7792.93798897438	1997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	NA	False	NA	69	True	AATAAA	-20	NA	34236834	34246231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_34236964_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_8102.known	chr1	+	1749	6	FSM	ENSG00000158793.14	ENST00000368007.8	1749	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	89.7275877308646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	7	True	NA	4	True	AATAAA	-13	NA	161118116	161121193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161118552_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_81021.known	chr6	-	9900	5	FSM	ENSG00000272325.2	ENST00000607016.2	9900	5	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	21.3131414859471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTAGTGTCTGGTCT	-13	True	NA	-3	True	AATAAA	-20	NA	34392669	34279678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_81022.nnic	chr6	-	987	5	NNC	ENSG00000272325.2	novel	9900	5	NA	NA	442	-8660	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	198.487247701206	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTCCTATAATGTGC	599	False	NA	44	True	ATTAAA	-30	NA	34392227	34288338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392074
transcript_81024.known	chr6	-	4782	9	FSM	ENSG00000270800.3	ENST00000639725.1	4782	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4378.21681738125	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGTCAAGTTCCTTTG	-4	True	NA	NA	False	NA	NA	NA	34426071	34284886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_81025.known	chr6	-	1053	5	FSM	ENSG00000186577.14	ENST00000481533.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	21.821720830402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	122	False	NA	-26	True	AATAAA	-15	NA	34248989	34246394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
transcript_81026.known	chr6	-	818	5	FSM	ENSG00000186577.14	ENST00000476320.6	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	18.1796589626978	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	30	True	NA	-26	True	AATAAA	-15	NA	34249006	34246394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248978
transcript_81028.known	chr6	-	903	5	FSM	ENSG00000186577.14	ENST00000468145.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.2489316044193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCAGGCTTTGGAGTT	122	False	NA	-116	True	NA	NA	NA	34248989	34246484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248726
transcript_81029.known	chr6	-	792	5	FSM	ENSG00000186577.14	ENST00000394990.8	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	27.6981497577004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-4	True	NA	-26	True	AATAAA	-15	NA	34249040	34246394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248978
transcript_81031.known	chr6	-	1093	4	FSM	ENSG00000186577.14	ENST00000637920.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	35.5621521658443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-19	True	NA	-26	True	AATAAA	-15	NA	34249055	34246394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248726
transcript_81032.known	chr6	-	806	4	FSM	ENSG00000186577.14	ENST00000413013.6	806	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	34.8807492274273	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	16	True	NA	-26	True	AATAAA	-15	NA	34249020	34246394	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248978
transcript_81035.known	chr6	-	363	1	FSM	ENSG00000220583.1	ENST00000402419.1	363	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGAGCGCATTGTCC	50	False	NA	NA	False	NA	NA	NA	34263673	34263310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34263300_34263700
transcript_8104.known	chr1	-	954	6	FSM	ENSG00000158796.17	ENST00000463227.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	130.202304127078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGCGTGACTACAT	304	False	NA	NA	False	NA	NA	NA	161132476	161122332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
transcript_81040.known	chr6	-	777	6	FSM	ENSG00000124614.16	ENST00000467531.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_5	3710.13182515123	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	304	False	NA	-10	True	AATAAA	-22	NA	34425784	34417453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425557
transcript_81041.known	chr6	-	781	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_5	3115.25245204943	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	7	True	NA	-10	True	AATAAA	-22	NA	34426026	34417453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
transcript_81044.known	chr6	-	588	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_5	1435.86302967936	14446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-2	True	NA	-10	True	AATAAA	-22	NA	34426069	34417453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_81045.known	chr6	-	671	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4332.82348282657	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	36	False	NA	-10	True	AATAAA	-22	NA	34426052	34417453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_81046.known	chr6	-	1407	5	FSM	ENSG00000124614.16	ENST00000644700.1	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_4	1438.83129657372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	0	True	NA	-10	True	AATAAA	-22	NA	34426067	34417453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_81047.known	chr6	+	668	3	FSM	ENSG00000124507.11	ENST00000487760.1	668	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTTTTTATCTTGAAA	24	False	NA	NA	False	ATTAAA	-8	NA	34514889	34527694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34515069_34526242_34526369_34527331
transcript_81048.known	chr6	-	4338	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	14.6714007511212	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-5	True	NA	-15	True	ATTAAA	-22	NA	34696767	34587287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
transcript_8105.known	chr1	-	2344	6	FSM	ENSG00000158796.17	ENST00000368006.8	2344	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_5	48.5122664900332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCTGAAACTGCAGT	-9	True	NA	-10	True	AATAAA	-20	NA	161132667	161120973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132550
transcript_81051.known	chr6	+	365	2	FSM	ENSG00000272288.7	ENST00000606496.2	371	2	5	1	5	0	multi-exon	FALSE	canonical	3	26	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	-13	True	NA	9	True	AATAAA	-15	NA	34696944	34697470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34696998_34697158
transcript_81059.known	chr6	+	806	6	FSM	ENSG00000124562.10	ENST00000244520.10	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_1	394.54865352704	2224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTCTCTAGCTCAT	-1	True	NA	8	True	TATAAA	-18	NA	34757504	34773857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34757552_34757911_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_81062.known	chr6	+	600	5	FSM	ENSG00000124562.10	ENST00000374018.5	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1272.95529674062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTGGGACAAAAAAGA	19	True	NA	-53	True	NA	NA	NA	34757524	34773714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34757552_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_81063.known	chr6	+	1054	5	FSM	ENSG00000124562.10	ENST00000374017.3	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	2892	junction_2	158.207735272331	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTCCCTTTTTCCTCC	24	False	NA	27	True	AATAAA	-24	NA	34757553	34773794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_81065.known	chr6	-	1849	5	FSM	ENSG00000064995.19	ENST00000361288.9	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	19.4679223339318	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-16	True	NA	NA	False	AATACA	-39	NA	34888042	34877461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_81068.known	chr6	-	1465	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	167.348604880816	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGTGTATTCATTTTCT	NA	False	NA	-4	True	ATTAAA	-17	NA	34888071	34877777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
transcript_81072.nic	chr6	+	2597	13	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	55.3947325012847	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	-20	True	NA	5	True	AATAAA	-14	NA	35259509	35295983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_81073.known	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	33.3137442440137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	37	False	NA	5	True	AATAAA	-14	NA	35259773	35295983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_81076.nnic	chr6	+	1458	5	NNC	ENSG00000023892.11	novel	2296	11	NA	NA	976	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.7278356643601	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	104	False	NA	NA	False	AATAAA	-19	NA	35318583	35321771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_35319000_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_81079.known	chr6	+	3734	8	FSM	ENSG00000112033.14	ENST00000360694.8	3734	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	11.1702958870426	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	-1	True	NA	15	True	AATAAA	-19	NA	35342557	35428178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35342682_35347066_35347151_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_81092.known	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1751.87122814435	13361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	-3	True	NA	21	True	AATAAA	-15	NA	35468400	35470780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_81093.known	chr6	+	962	6	FSM	ENSG00000198755.11	ENST00000478340.2	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_3	4868.42590577283	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	16	False	NA	26	True	AATAAA	-20	NA	35468419	35470785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468440_35468798_35468874_35468946_35469286_35469380_35469530_35470178_35470352_35470579
transcript_81094.known	chr6	+	1069	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1815.92281980815	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	4	True	NA	26	True	AATAAA	-20	NA	35468407	35470785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
transcript_81095.known	chr6	+	1063	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	0	0	0	0	multi-exon	FALSE	canonical	3	13064	junction_3	328.868894850212	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	16	False	NA	26	True	AATAAA	-20	NA	35468419	35470785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_81096.nic	chr6	-	2831	12	ISM	ENSG00000007866.22	ENST00000338863.13	2986	13	10341	0	10212	0	3prime_fragment	FALSE	canonical	3	108	junction_11	16.9924630837584	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	NA	False	NA	0	True	ATTAAA	-29	NA	35486738	35473596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460
transcript_811.known	chr1	+	1067	4	FSM	ENSG00000177674.16	ENST00000376637.7	1067	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	371.58130559363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAACCTCCAGCCTCC	9	False	NA	-46	True	NA	NA	NA	11736083	11750710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11736236_11747439_11747546_11748414_11748590_11750076
transcript_81104.known	chr6	-	3750	11	FSM	ENSG00000096060.15	ENST00000357266.9	3750	11	0	0	0	0	multi-exon	FALSE	canonical	1	147	junction_7	137.013466491437	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCATTGTTTTTGGTTT	1	True	NA	-6	True	AATAAA	-17	NA	35688915	35573589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
transcript_81113.known	chr6	+	532	3	FSM	ENSG00000196748.10	ENST00000481904.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	-3	True	NA	3	True	ATTAAA	-14	NA	35776593	35779552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_35776805_35777458_35777582_35779354
transcript_81114.known	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_4	64.1330561324571	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-3	True	NA	54	True	AGTAAA	-13	NA	35921098	35832965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_81115.known	chr6	-	4357	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	180.276035259512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-1	True	NA	-14	True	AATAAA	-20	NA	35921147	35833033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
transcript_81119.nic	chr6	-	927	10	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	37503	-33	-802	5prime_fragment	FALSE	canonical	3	649	junction_5	54.4122353705919	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATTGAAGAAGAAGC	NA	False	NA	-68	True	NA	NA	NA	35921180	35870468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_81121.nic	chr6	-	902	9	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	37967	-33	-1266	5prime_fragment	FALSE	canonical	3	649	junction_4	54.6391572043347	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATAAGGTGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	35921180	35870932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_81123.nic	chr6	-	1449	7	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	40527	-33	747	5prime_fragment	FALSE	canonical	3	649	junction_2	57.8292505763495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAATTGCTAAAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	35921180	35873492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_81125.nic	chr6	-	730	6	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-82	53630	-33	130	5prime_fragment	FALSE	canonical	3	649	junction_1	63.3232974504645	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCTGAACACACATCTG	NA	False	NA	-20	True	AATAAA	-19	NA	35921180	35886595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_8113.known	chr1	-	964	5	FSM	ENSG00000158796.17	ENST00000464113.1	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	132.737287526904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATCAAGCTGCTGGTA	12	True	NA	NA	False	NA	NA	NA	161132588	161122241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
transcript_81130.known	chr6	+	1376	13	FSM	ENSG00000112062.11	ENST00000468133.5	1376	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	70.28291044059	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTGTGGATGCTCCAG	0	True	NA	NA	False	NA	NA	NA	36027781	36108670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36027885_36028190_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36102570_36102650_36107454_36107629_36108379
transcript_81131.known	chr6	+	6316	12	FSM	ENSG00000156711.17	ENST00000211287.9	6316	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	9.74467432426299	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGCACAGACCCCTG	-8	True	NA	11	True	AATAAA	-18	NA	36130512	36144521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
transcript_81132.known	chr6	+	6196	10	FSM	ENSG00000156711.17	ENST00000373766.9	6196	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	28.4487843911358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCACAGACCCCTGAAT	245	False	NA	14	True	AATAAA	-21	NA	36130483	36144524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36138701_36138781_36138878_36139056_36139293
transcript_81133.known	chr6	-	1230	4	FSM	ENSG00000246982.7	ENST00000499560.2	1230	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	6.16441400296898	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGCACTCTGTGTATG	-8	True	NA	NA	False	ATTAAA	-23	NA	36197205	36158067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36158942_36179616_36179708_36196036_36196171_36197074
transcript_81134.known	chr6	+	5384	8	FSM	ENSG00000112078.14	ENST00000373731.7	5384	8	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_3	27.6095221669212	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTTTTTTTTTAG	-34	True	NA	12	True	AATAAA	-14	NA	36442999	36491141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_81135.known	chr6	-	1605	8	FSM	ENSG00000010030.14	ENST00000340181.9	1605	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	1.35526185435788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTTTATTTTT	2	True	NA	NA	False	AATAAA	-16	NA	36387669	36366193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36385533_36385670_36387535
transcript_81136.known	chr6	+	1339	7	FSM	ENSG00000112078.14	ENST00000265344.8	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	66.7183133280011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGGGTCTGGTGCT	2	True	NA	NA	False	NA	NA	NA	36443035	36487406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36443112_36470051_36470258_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_81137.known	chr6	-	1570	7	FSM	ENSG00000010030.14	ENST00000373738.4	1570	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.03442593595562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-32	True	NA	NA	False	AATAAA	-15	NA	36387800	36366194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36385533_36385670_36387535
transcript_81139.known	chr6	-	1434	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.894427190999916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-32	True	NA	NA	False	AATAAA	-15	NA	36387800	36366194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
transcript_81141.nnic	chr6	-	2311	14	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	45.6987822400647	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATACGTGGTGTGAT	-33	True	NA	-8	True	AATAAA	-17	NA	36547479	36493888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_36494638_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_81142.known	chr6	-	3585	14	FSM	ENSG00000112079.9	ENST00000229812.8	3585	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_13	30.9941777315424	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-33	True	NA	-11	True	AATAAA	-14	NA	36547479	36493891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_81148.known	chr6	+	2117	3	FSM	ENSG00000124762.14	ENST00000244741.10	2117	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	3	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAATATTACTATTGTG	3	True	NA	18	True	AATAAA	-19	NA	36678713	36687332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36678799_36684096_36684547_36685750
transcript_81149.known	chr6	+	2267	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	58	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	-1	True	NA	23	True	AATAAA	-24	NA	36678709	36687337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36678940_36684096_36684547_36685750
transcript_81150.known	chr6	+	2102	3	FSM	ENSG00000124762.14	ENST00000615513.4	2102	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	60	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	-4	True	NA	23	True	AATAAA	-24	NA	36676459	36687337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36676525_36684096_36684547_36685750
transcript_81152.known	chr6	+	6763	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	14.683643110618	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	-15	True	NA	22	True	ATTAAA	-19	NA	36885951	36928964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_81153.known	chr6	+	1309	8	FSM	ENSG00000198663.17	ENST00000355190.7	1309	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	6.90755280213519	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTCTGGGGGTTGGTT	18	False	NA	8	True	AATAAA	-17	NA	36885863	36923522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_36886029_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_81161.known	chr6	-	1516	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	34.6153466286591	1312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTCTGATTC	-3	True	NA	-21	True	AATAAA	-20	NA	36874803	36854828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
transcript_81163.known	chr6	-	1955	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	657.552901432134	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	278	False	NA	-9	True	AATAAA	-18	NA	36986196	36968140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_81166.known	chr6	-	2006	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	449.759292830736	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	176	False	NA	-9	True	AATAAA	-18	NA	36986298	36968140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_81167.nnic	chr6	-	1546	11	NIC	ENSG00000137409.20	novel	2006	12	NA	NA	202	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_10	1024.81473447643	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	551	False	NA	-9	True	AATAAA	-18	NA	36985923	36968140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36985852
transcript_81168.nnic	chr6	+	1940	13	NNC	ENSG00000065491.8	novel	3462	13	NA	NA	0	-8304	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	33.3652971746927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTTCTAGATTTCC	-2	True	NA	NA	False	AATAAA	-25	NA	37257771	37324666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37324261
transcript_81169.known	chr6	+	3462	13	FSM	ENSG00000065491.8	ENST00000373491.3	3462	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	13.7042167071145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	-2	True	NA	27	True	AATAAA	-20	NA	37257771	37332970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_81171.known	chr6	-	1955	2	FSM	ENSG00000172738.12	ENST00000357219.4	1955	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCAATTTATGTCTCGA	9	True	NA	NA	False	AATAAA	-16	NA	37258122	37217641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_37219042_37257567
transcript_81175.known	chr6	+	2124	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	114.291428428579	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTACCTCTTCTTTG	7	True	NA	-51	True	NA	NA	NA	37354014	37391168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_81178.known	chr6	+	5616	8	FSM	ENSG00000112130.17	ENST00000373479.9	5616	8	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	22.1405528754964	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATCAAATGCCCATTTTC	-25	True	NA	NA	False	AATAAA	-16	NA	37353982	37394734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_81187.known	chr6	+	1800	7	FSM	ENSG00000112130.17	ENST00000469731.5	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	122.709231745438	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	26	False	NA	12	True	AATAAA	-13	NA	37354090	37391231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37390741
transcript_81188.nic	chr6	+	2070	7	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	125.652187494776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353935	37391231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37376925_37377034_37381149_37381355_37390741
transcript_8119.known	chr1	+	888	6	FSM	ENSG00000143222.12	ENST00000368003.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_5	70.9743615681043	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	-8	True	NA	24	True	AATAAA	-18	NA	161153977	161158856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
transcript_81194.nic	chr6	+	612	3	ISM	ENSG00000112130.17	ENST00000479516.1	1525	4	-79	1564	10	145	5prime_fragment	FALSE	canonical	3	322	junction_2	16.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGAATTGAGAACTAAAA	-15	True	NA	28	True	AATATA	-43	NA	37353992	37368683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_37354276_37360445_37360575_37368483
transcript_81195.known	chr6	+	4034	24	FSM	ENSG00000137200.13	ENST00000373451.9	4034	24	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_15	20.3412289565586	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	4	True	NA	13	True	ATTAAA	-18	NA	37433220	37481508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_81196.nic	chr6	+	2876	24	NIC	ENSG00000137200.13	novel	4034	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	5	junction_23	42.402785513238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTCTTCCTTGATTC	2	True	NA	6	True	NA	NA	NA	37433218	37482827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37482491
transcript_81202.known	chr6	-	572	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	54.7783412186483	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTCTGCTGAGTAAATG	-3	True	NA	NA	False	AATAAA	-15	NA	37499893	37482937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
transcript_81203.known	chr6	+	3138	6	FSM	ENSG00000156639.12	ENST00000287218.9	3138	6	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_2	20.165316759228	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	-20	True	NA	15	True	ATTAAA	-15	NA	37819726	38154624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38082391_38082458_38116571_38116740_38152234
transcript_81205.known	chr6	+	3001	5	FSM	ENSG00000156639.12	ENST00000373391.6	3001	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	61.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	51	True	NA	15	True	ATTAAA	-15	NA	37819797	38154624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38116571_38116740_38152234
transcript_81211.known	chr6	-	2016	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_3	101.833982540211	3819	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCATCATGTTCTT	-8	True	NA	0	True	AATAAA	-37	NA	38703145	38675924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
transcript_81218.known	chr6	-	2018	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	-14	True	NA	-1	True	ATTAAA	-28	NA	39115186	39104062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39105777_39114882
transcript_81221.known	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	24.8130510014387	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-2	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
transcript_81222.known	chr6	-	3358	11	FSM	ENSG00000124615.20	ENST00000373188.6	3358	11	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_1	17.1583798768998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAATTTGTGATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	39934551	39905058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_81224.nic	chr6	-	2731	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-18	-202	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	35.1346615814703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAGAATGAAGACACT	-31	True	NA	NA	False	AATAAA	-21	NA	39934515	39905522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_81226.known	chr6	-	2852	9	FSM	ENSG00000124615.20	ENST00000373195.7	2852	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	47.6392695158102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-13	True	NA	-21	True	AATAAA	-19	NA	39934497	39905320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_8123.known	chr1	+	2315	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	0	0	0	0	multi-exon	FALSE	non_canonical	3	76	junction_1	36.9440645479818	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	5	True	NA	3	True	AATAAA	-16	NA	161159499	161165723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_81232.known	chr6	+	1098	3	FSM	ENSG00000204091.8	ENST00000451810.3	1098	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	NA	False	NA	6	True	AATAAA	-17	NA	40334774	40379887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_40335124_40337116_40337260_40379281
transcript_81234.known	chr6	+	1165	2	FSM	ENSG00000204091.8	ENST00000373170.2	1165	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTGGGCTGATT	-4	True	NA	4	True	AATAAA	-15	NA	40378336	40379885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_40378898_40379281
transcript_81236.known	chr6	+	1660	9	FSM	ENSG00000001167.15	ENST00000353205.5	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	17.0545998194036	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCTGTGGTAATAATAAG	21	True	NA	10	True	AATAAA	-20	NA	41072982	41097950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_81243.known	chr6	-	3184	6	FSM	ENSG00000124596.17	ENST00000424266.7	3184	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.022478661666	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGTGGCTACCTTA	-7	True	NA	-19	True	AATAAA	-26	NA	41072356	41064771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072235
transcript_81244.known	chr6	-	3330	6	FSM	ENSG00000124596.17	ENST00000479950.5	3330	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	127.52568368764	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTGGGATGTGGCT	1084	False	NA	-25	True	AATAAA	-20	NA	41072591	41064777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072318
transcript_81245.known	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.182879439152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-2	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_81252.known	chr6	-	1188	5	FSM	ENSG00000124596.17	ENST00000628419.2	1188	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	125.412319968973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGGTTCTGTGCTTATG	1098	False	NA	-6	True	AATAAA	-14	NA	41072577	41066792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072318
transcript_81255.known	chr6	-	1129	5	FSM	ENSG00000124596.17	ENST00000373154.6	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	149.169995307367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTGCTTATGTCTAT	1146	False	NA	-1	True	AATAAA	-19	NA	41072529	41066787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_81257.known	chr6	-	832	4	FSM	ENSG00000124596.17	ENST00000482515.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	146.74770488457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAAGGAGTTAGGTG	1061	False	NA	NA	False	NA	NA	NA	41072614	41067126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41067438_41071131_41071277_41071595_41071676_41072318
transcript_81258.known	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	0	True	NA	-8	True	AATAAA	-21	NA	41072320	41071040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41071277_41071595_41071676_41072235
transcript_81259.known	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	103.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-3	True	NA	NA	False	NA	NA	NA	41072490	41070824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41071277_41071595_41071676_41072318
transcript_81262.known	chr6	-	419	2	FSM	ENSG00000234753.6	ENST00000414386.6	453	2	34	0	-7	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCGCCAGACCTGCT	-7	True	NA	0	True	ATTAAA	-28	NA	41546176	41523894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41524226_41546088
transcript_81263.known	chr6	-	2188	9	FSM	ENSG00000112561.19	ENST00000358871.6	2188	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	5.74456264653803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	8551	False	NA	0	True	AGTAAA	-15	NA	41736259	41683977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41736145
transcript_81264.known	chr6	-	2239	9	FSM	ENSG00000112561.19	ENST00000678831.1	2239	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6.31961232988227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	1	True	NA	0	True	AGTAAA	-15	NA	41733828	41683977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41733663
transcript_81265.nnic	chr6	+	2235	3	FSM	ENSG00000268745.1_ENSG00000214736.8	ENST00000398884.7	637	3	-2	-1596	-2	17	multi-exon	FALSE	canonical	3	522	junction_2	428.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGTAATCACTAATT	-18	True	NA	18	True	AATAAA	-27	NA	41787659	41791494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_81267.nnic	chr6	+	2188	3	FSM	ENSG00000268745.1_ENSG00000214736.8	ENST00000398881.4	565	3	-34	-1589	-2	7	multi-exon	FALSE	canonical	3	893	junction_2	243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCAAAAATTGATGAGTA	-18	True	NA	8	True	AATAAA	-17	NA	41787659	41791484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_81269.known	chr6	+	637	3	FSM	ENSG00000214736.8	ENST00000398884.7	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	428.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	-16	True	NA	34	True	AATAAA	-21	NA	41787661	41789898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_8127.nic	chr1	+	2356	14	NIC	ENSG00000143258.16	novel	2315	14	NA	NA	-4	0	intron_retention	FALSE	non_canonical	3	9	junction_1	50.4371423203554	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	1	True	NA	3	True	AATAAA	-16	NA	161159495	161165723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161159679_161160328_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_81270.known	chr6	+	565	3	FSM	ENSG00000214736.8	ENST00000398881.4	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_2	243	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTATTCTTTTAATA	16	True	NA	31	True	AATAAA	-18	NA	41787693	41789895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_81275.known	chr6	-	2478	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	2.62466929133727	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-12	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
transcript_81276.known	chr6	-	932	4	FSM	ENSG00000124641.16	ENST00000409312.5	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	150.156214952592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACCTTGCCTCCTTTA	8	True	NA	NA	False	NA	NA	NA	41921119	41906803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41907288_41909344_41909523_41916784_41916940_41921004
transcript_81277.known	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-12	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41907288_41909268_41909523_41921004
transcript_81282.known	chr6	+	1718	7	FSM	ENSG00000112578.10	ENST00000230340.9	1718	7	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_1	13.1497781983829	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTTGGTGTAGTC	-1	True	NA	24	True	GATAAA	-24	NA	41921498	41933046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_81286.known	chr6	+	1153	6	FSM	ENSG00000112578.10	ENST00000489290.1	1153	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	76.0010526242894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTCCCCCGCGA	2	False	NA	NA	False	NA	NA	NA	41921533	41932655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_41921831_41927373_41927537_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_81287.known	chr6	-	2026	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	8.31790237980706	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	0	True	NA	-20	True	AATAAA	-19	NA	41941808	41934951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
transcript_81288.known	chr6	-	2133	5	FSM	ENSG00000112576.13	ENST00000372988.8	2133	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.097433517017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	NA	False	NA	-24	True	AATAAA	-15	NA	42048968	41934955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_42048500
transcript_81290.known	chr6	-	1843	4	FSM	ENSG00000112576.13	ENST00000415497.6	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	116.878854660142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	NA	False	NA	-24	True	AATAAA	-15	NA	42048894	41934955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_42048500
transcript_81293.known	chr6	+	794	5	FSM	ENSG00000137413.17	ENST00000372978.7	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	13.1220234720107	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTATCTTTCATAAT	NA	False	NA	5	True	AATAAA	-23	NA	42050512	42057789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388
transcript_81294.nnic	chr6	+	802	5	NNC	ENSG00000137413.17	novel	1293	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	42.4403993854912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAGATTATCTTTCAT	-6	True	NA	2	True	AATAAA	-20	NA	42050521	42057786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056035_42057388
transcript_81295.nic	chr6	+	1341	5	ISM	ENSG00000137413.17	ENST00000684962.1	1502	6	-464	6297	0	0	5prime_fragment	FALSE	canonical	1	1	junction_1	41.7155546529109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTATCTTTCATAAT	3	True	NA	5	True	AATAAA	-23	NA	42050530	42057789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_42051152_42051356_42051514_42055530_42055630_42055951_42056015_42057388
transcript_81296.known	chr6	+	719	4	ISM	ENSG00000137413.17	ENST00000372978.7	794	5	11	1438	0	-32	5prime_fragment	FALSE	canonical	3	90	junction_3	9.03081145609604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTTGTAAATAAAGTC	-4	True	NA	NA	False	NA	NA	NA	42050523	42056351	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951
transcript_81298.known	chr6	-	894	3	FSM	ENSG00000188112.9	ENST00000356542.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	3	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCTCATG	-4	True	NA	54	True	AATAAA	-32	NA	42142619	42126376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42126844_42128671_42128779_42142299
transcript_81299.known	chr6	+	2520	3	FSM	ENSG00000048545.17	ENST00000679182.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	4	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGCAAGCACGGTGAA	128	False	NA	NA	False	NA	NA	NA	42178099	42181338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42178430_42178801_42178896_42179242
transcript_813.known	chr1	-	7018	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_11	6.36882905023163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	-4	True	NA	NA	False	AATAAA	-22	NA	11805964	11785722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
transcript_81302.known	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	TRUE	canonical	3	729	junction_5	52.1272481529574	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	1	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
transcript_81303.nnic	chr6	-	2171	7	NNC	ENSG00000048544.6	novel	2100	7	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	300.28190458671	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	NA	False	NA	-10	True	ATTAAA	-26	NA	42217906	42206806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214219_42214279_42214345_42217801
transcript_81307.nnic	chr6	-	2072	6	NIC	ENSG00000048544.6	novel	2100	7	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	98	junction_4	289.302886262823	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	NA	False	NA	-10	True	ATTAAA	-26	NA	42217906	42206806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214279_42214345_42217801
transcript_81312.known	chr6	+	7891	47	FSM	ENSG00000024048.11	ENST00000372901.2	7891	47	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_7	26.1906273369398	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	19	True	NA	6	True	AATAAA	-21	NA	42564028	42693505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617408_42617508_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
transcript_81315.known	chr6	-	1606	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGGTTTGTTTGGTGT	970	False	42746121	-19	True	AATAAA	-17	NA	42746103	42744497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42744500_42746100
transcript_8133.known	chr1	+	2195	13	FSM	ENSG00000143258.16	ENST00000289865.12	2195	13	0	0	0	0	multi-exon	TRUE	non_canonical	3	111	junction_1	25.0780725380206	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	-16	True	NA	3	True	AATAAA	-16	NA	161159478	161165723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_81333.known	chr6	+	3769	7	FSM	ENSG00000146223.16	ENST00000304734.9	3769	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	147.758436495368	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTTGAACAAGTTGTGAG	43	False	NA	54	True	NA	NA	NA	42879681	42889925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_81348.known	chr6	+	1103	6	FSM	ENSG00000146223.16	ENST00000483998.6	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	216.098681162102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCGTGGTGGCTCATG	-21	True	NA	NA	False	AAGAAA	-13	NA	42879617	42887301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_81351.known	chr6	+	4499	6	FSM	ENSG00000146223.16	ENST00000493763.7	4499	6	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	55.5467370778878	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATGTACCATGACATA	-23	True	NA	29	True	AATAAA	-26	NA	42879615	42889900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_81353.known	chr6	+	1702	6	FSM	ENSG00000146223.16	ENST00000397415.7	1702	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	195.525548202786	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	0	True	NA	NA	False	NA	NA	NA	42879638	42887010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42881083_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_81356.nic	chr6	+	1516	5	ISM	ENSG00000146223.16	ENST00000483998.6	1103	6	-15	291	-13	0	5prime_fragment	FALSE	canonical	3	69	junction_1	201.525432638166	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	NA	False	NA	NA	False	NA	NA	NA	42879602	42887010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_81357.known	chr6	+	703	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	60.2966624283633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	8	True	NA	1	True	AATAAA	-21	NA	42879932	42886249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
transcript_81360.known	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	5	True	NA	-11	True	AATAAA	-17	NA	42890821	42890264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42890300_42890800
transcript_81363.nnic	chr6	+	1796	7	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-303	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	240.396489621255	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	12	True	NA	48	True	NA	NA	NA	42929176	42939294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_42929722_42934474_42934599_42935411_42935474_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_81369.known	chr6	+	1431	6	FSM	ENSG00000137161.18	ENST00000372836.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	80.8613628378844	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	-1	True	NA	48	True	NA	NA	NA	42929479	42939294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_81372.nnic	chr6	+	1430	6	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	263.971665146091	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	16	False	NA	48	True	NA	NA	NA	42929418	42939294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_42929722_42935411_42935474_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_81378.nnic	chr6	+	1409	5	NIC	ENSG00000137161.18	novel	1431	6	NA	NA	-102	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	223.438330418037	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	213	False	NA	48	True	NA	NA	NA	42929377	42939294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_42929722_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_81386.known	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	35	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	5	True	NA	NA	False	AATAAA	-27	NA	42929457	42928286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_42928647_42929164
transcript_81387.known	chr6	+	1076	6	FSM	ENSG00000124713.6	ENST00000372808.4	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3.18747549010185	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTTTATTTATGT	1	True	NA	12	True	AATATA	-20	NA	42960753	42963880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42960974_42962211_42962340_42962761_42962879_42963071_42963215_42963327_42963450_42963534
transcript_81390.known	chr6	+	2973	16	FSM	ENSG00000112640.16	ENST00000485511.6	2973	16	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_6	43.2725727864147	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	-4	True	NA	22	True	AATAAA	-16	NA	42984569	43012342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_42984705_42989610_42989689_43006462_43006680_43006910_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_81395.known	chr6	+	1869	11	FSM	ENSG00000124702.19	ENST00000326974.9	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_4	41.3202129713776	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGTGTTTTTGTGG	2	True	NA	30	True	ATTAAA	-10	NA	43014248	43021294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_81401.known	chr6	+	1903	10	FSM	ENSG00000124702.19	ENST00000244670.12	1903	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	474.88340349351	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTTTGTGGAATA	1510	False	NA	34	True	ATTAAA	-14	NA	43014102	43021298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_81411.known	chr6	-	2018	4	FSM	ENSG00000124733.5	ENST00000244711.4	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	612.658868285516	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	-11	True	NA	NA	False	NA	NA	NA	43013946	43011142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013785
transcript_81412.known	chr6	-	1004	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_3	284.713891477041	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	2882	False	NA	-17	True	AATAAA	-28	NA	43013983	43012081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
transcript_81414.known	chr6	+	2770	17	FSM	ENSG00000137171.15	ENST00000394056.6	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	30.6369236991902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTGTGACTTGAGT	252	False	NA	6	True	AATAAA	-11	NA	43059894	43075087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43060277_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_81417.known	chr6	+	2361	16	FSM	ENSG00000137171.15	ENST00000347162.10	2361	16	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	12.3504385887034	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	-12	True	NA	12	True	AATAAA	-17	NA	43059630	43075093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_81418.known	chr6	+	2688	16	FSM	ENSG00000137171.15	ENST00000259708.7	2688	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	26.1571320208381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	214	False	NA	12	True	AATAAA	-17	NA	43059856	43075093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43060239_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_8142.nic	chr1	+	1807	13	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_3	100.094226440223	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	4074	False	NA	10	True	AATAAA	-16	NA	161166365	161171218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167354_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_81420.known	chr6	+	2602	16	FSM	ENSG00000137171.15	ENST00000479388.5	2602	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	26.3814749819305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGACTTGAGTCC	240	False	NA	8	True	AATAAA	-13	NA	43059882	43075089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43060183_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_81422.known	chr6	-	1216	7	FSM	ENSG00000112651.12	ENST00000388752.8	1216	7	0	0	0	0	multi-exon	TRUE	canonical	3	379	junction_1	43.1804997140556	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTTCTGACTTTGG	26	False	43059460	NA	False	AATAAA	-15	NA	43059434	43054028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43054487_43055544_43055619_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_81430.known	chr6	-	899	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	163.767396022529	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	12	True	NA	NA	False	AATAAA	-23	NA	43059394	43054231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_81435.known	chr6	-	570	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	197	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTACTGTGGTTTT	26	False	43059460	NA	False	AATAAA	-20	NA	43059434	43054234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43054487_43058064_43058234_43059285
transcript_81438.known	chr6	-	689	2	FSM	ENSG00000112651.12	ENST00000468957.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGCTGGCCAACATG	22	False	43059460	NA	False	NA	NA	NA	43059438	43057697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43058234_43059285
transcript_8144.known	chr1	+	1667	13	FSM	ENSG00000143224.18	ENST00000652473.1	1667	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	93.8185305079261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAACTCTCATTCATGA	10	True	NA	-32	True	NA	NA	NA	161166466	161171176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_81440.nic	chr6	+	624	4	ISM	ENSG00000112659.14	ENST00000506830.5	1978	13	8996	-2	-421	0	3prime_fragment	FALSE	canonical	3	36	junction_1	7.84573486395988	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGAGCAGGCTGACA	1334	False	NA	13	True	AATAAA	-20	NA	43222818	43224587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_43222897_43223263_43223398_43224094_43224169_43224249
transcript_81441.known	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_3	27.0102861065105	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-11	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
transcript_81443.known	chr6	-	796	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_2	31.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTTCTGTCTTGTG	-8	True	NA	-11	True	ATTAAA	-15	NA	43229478	43225634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43226144_43226326_43226396_43229260
transcript_81445.nic	chr6	-	1362	7	ISM	ENSG00000146215.14	ENST00000372569.8	991	8	-31	0	-31	0	intron_retention	FALSE	canonical	3	81	junction_4	29.797464470805	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	13	False	NA	-15	True	AATAAA	-14	NA	43308857	43305471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314
transcript_81447.nnic	chr6	-	1230	6	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-31	0	intron_retention	FALSE	canonical	3	56	junction_4	38.9902551928043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	13	False	NA	-15	True	AATAAA	-14	NA	43308857	43305471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314
transcript_81453.known	chr6	-	773	3	FSM	ENSG00000146215.14	ENST00000485819.1	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	25	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTCATTCTTGGCAAA	82	False	NA	NA	False	NA	NA	NA	43308788	43307502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43307744_43307838_43307897_43308314
transcript_81455.known	chr6	-	991	8	FSM	ENSG00000146215.14	ENST00000372569.8	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	27.8230560682969	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-6	True	NA	-15	True	AATAAA	-14	NA	43308826	43305471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_81459.known	chr6	+	2778	11	FSM	ENSG00000137221.14	ENST00000372444.6	2778	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	46.2017315692821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_8146.known	chr1	+	1733	13	FSM	ENSG00000143224.18	ENST00000367999.9	1733	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	70.2346760668989	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	-31	True	NA	12	True	AATAAA	-18	NA	161166425	161171220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_81461.known	chr6	+	2751	11	FSM	ENSG00000137221.14	ENST00000372445.9	2751	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	50.3368652182474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_81462.known	chr6	+	2720	10	FSM	ENSG00000137221.14	ENST00000259751.5	2720	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	40.9661106552992	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-6	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498922_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_81465.known	chr6	+	2665	10	FSM	ENSG00000137221.14	ENST00000372452.5	2665	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	24.0251925391496	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-6	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_81469.known	chr6	+	2572	9	FSM	ENSG00000137221.14	ENST00000436109.6	2572	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	45.2023229491583	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43477629_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_81470.known	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	1	166	junction_9	68.5294470987984	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-24	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
transcript_81479.known	chr6	+	1275	9	FSM	ENSG00000171453.20	ENST00000642195.1	1275	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	23.5660640540588	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	-7	True	NA	6	True	AATAAA	-19	NA	43517088	43521513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_81480.known	chr6	+	1280	9	FSM	ENSG00000171453.20	ENST00000304004.7	1280	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	110.391066214617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTATTAATAAGGGTC	-7	True	NA	NA	False	AAAAAG	-17	NA	43517088	43529585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43529248
transcript_81485.known	chr6	+	1334	9	FSM	ENSG00000171453.20	ENST00000645141.1	1334	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	110.164649502461	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	1	True	NA	6	True	AATAAA	-19	NA	43517096	43521513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519906_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_81489.nic	chr6	-	1471	9	NIC	ENSG00000137207.12	novel	1507	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	141.300212314066	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	NA	False	NA	-32	True	ATTAAA	-21	NA	43516992	43511831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513099_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
transcript_81494.known	chr6	-	1507	9	FSM	ENSG00000137207.12	ENST00000372422.7	1507	9	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_8	17.4122801493658	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	-1	True	NA	-32	True	ATTAAA	-21	NA	43516926	43511831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
transcript_81495.known	chr6	-	1321	9	FSM	ENSG00000137207.12	ENST00000490447.6	1321	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	143.41025067965	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGGCCAGTCCTC	12	False	NA	-70	True	NA	NA	NA	43516972	43512158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516191_43516726
transcript_815.nic	chr1	+	1200	6	ISM	ENSG00000011021.23	ENST00000376490.7	963	11	-59	4729	-9	2710	5prime_fragment	FALSE	canonical	3	122	junction_5	15.8795465930234	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGTGCAAGTCCT	7	True	NA	NA	False	NA	NA	NA	11806203	11823489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694
transcript_8150.known	chr1	+	1686	13	FSM	ENSG00000143224.18	ENST00000352210.9	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	89.4029579426144	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-47	True	NA	10	True	AATAAA	-16	NA	161166409	161171218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_81501.nic	chr6	+	1506	8	NIC	ENSG00000171453.20	novel	1334	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	302	junction_7	19.3675512343798	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	-11	True	NA	6	True	AATAAA	-19	NA	43517084	43521513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_81520.known	chr6	+	1882	5	FSM	ENSG00000171453.20	ENST00000455605.2	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_4	13.0958008537088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCACCCAAACAAAAAAAC	37	False	NA	-13	True	CATAAA	-43	NA	43517132	43521494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43521049_43521181
transcript_81524.known	chr6	-	882	1	FSM	ENSG00000219470.1	ENST00000402069.1	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	43539703	43538821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43538800_43539700
transcript_81525.known	chr6	-	1639	9	FSM	ENSG00000137207.12	ENST00000510102.5	1639	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_8	180.275483635463	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAACTGCAGCGGCTG	-1	True	NA	-40	True	ATTAAA	-13	NA	43516985	43511839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515605_43515702_43515888_43516188_43516726
transcript_81526.known	chr6	+	8368	11	FSM	ENSG00000170734.12	ENST00000372236.9	8368	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	2.42693221990232	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTGTATTTAAATATA	20	True	NA	NA	False	AATAAA	-22	NA	43576184	43620523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587490_43597695_43597866_43600987_43601092_43603891_43604012_43604614_43604739_43605253_43605320_43610553_43610724_43613659
transcript_81535.known	chr6	+	1517	4	FSM	ENSG00000124688.14	ENST00000451025.6	1517	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	143.799242773466	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAGATTCTTATTA	47	False	NA	-10	True	AATATA	-1	NA	43629539	43640919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43629770_43633193_43633316_43636380_43636647_43640020
transcript_81536.known	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	10	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	-2	True	NA	12	True	AATAAA	-16	NA	43635839	43640941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43635922_43636380_43636647_43640020
transcript_81538.known	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_2	37.992630864419	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	0	True	NA	99	True	AAGAAA	-15	NA	43687791	43671201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_81541.known	chr6	+	2545	5	FSM	ENSG00000172426.16	ENST00000372163.5	2545	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.1650635094611	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCCATCCTTCATTC	2	True	NA	NA	False	AATAAA	-17	NA	43645035	43672600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43645326_43650374_43650541_43655561_43655692_43656576_43656724_43670788
transcript_81543.known	chr6	-	803	5	FSM	ENSG00000096080.12	ENST00000427312.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_1	27.1753564834024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGAAGCTGTATCACT	0	True	NA	NA	False	NA	NA	NA	43687791	43671783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43671907_43675201_43675618_43678517_43678626_43681088_43681121_43687667
transcript_81544.known	chr6	-	785	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	300.616449982365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGACAGGAGTTTTG	0	True	NA	-61	True	GGGGCT	-15	NA	43687791	43671509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_81549.known	chr6	+	993	7	FSM	ENSG00000112715.26	ENST00000230480.10	993	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	169.730832660291	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATATATATAAAAATAAA	4	True	NA	NA	False	NA	NA	NA	43771991	43784935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_43772102_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43781955_43782088_43784540
transcript_81561.known	chr6	-	957	3	FSM	ENSG00000180992.7	ENST00000372014.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_2	163.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGTTTTTATTTTTC	7	True	NA	0	True	TATAAA	-23	NA	44127452	44113450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44114210_44116540_44116630_44127343
transcript_81563.nnic	chr6	-	782	3	NNC	ENSG00000180992.7	novel	957	3	NA	NA	21	-243	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	806	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	-26	True	NA	-16	True	AATAAA	-13	NA	44127431	44113693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_44114210_44116540_44116630_44127254
transcript_81565.nnic	chr6	-	688	3	NNC	ENSG00000180992.7	novel	957	3	NA	NA	-13	-243	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_2	792.5	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	-6	True	NA	-16	True	AATAAA	-13	NA	44127465	44113693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_44114210_44116540_44116630_44127382
transcript_81567.known	chr6	+	828	2	FSM	ENSG00000262179.3	ENST00000573382.3	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGCTTTGAAAGTCTA	-3	True	NA	9	True	AATAAA	-19	NA	44216925	44218234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44216969_44217449
transcript_81574.known	chr6	+	2283	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	806.219110687578	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	12	True	NA	79	True	AATAAA	-18	NA	44219635	44234142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_81576.nic	chr6	+	2231	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_2	732.82803103929	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	-22	True	NA	79	True	AATAAA	-18	NA	44223556	44234142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_44223642_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_81579.nic	chr6	+	2279	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	717.136762476081	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	3882	False	NA	79	True	AATAAA	-18	NA	44223505	44234142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_81583.known	chr6	+	1998	13	FSM	ENSG00000112759.19	ENST00000652680.1	1998	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	623.375683721747	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTCCATTCTCCCC	4	True	NA	123	True	NA	NA	NA	44219627	44233946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44219783_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_81590.known	chr6	+	2083	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_1	289.070925552882	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	16	True	NA	79	True	AATAAA	-18	NA	44223594	44234142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_81612.known	chr6	+	2358	14	FSM	ENSG00000112759.19	ENST00000651428.1	2358	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	778.926069974043	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTGTTTTTTTCTC	3	True	NA	61	True	TTTAAA	-4	NA	44219552	44234124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44219783_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_81627.known	chr6	+	2555	12	FSM	ENSG00000096384.20	ENST00000371646.10	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	11124	junction_7	1247.81411520935	11918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	0	True	NA	35	True	AATAAA	-21	NA	44247100	44253883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_81638.known	chr6	+	2582	12	FSM	ENSG00000096384.20	ENST00000353801.7	2582	12	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	3838.47748742748	2624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	546	False	NA	35	True	AATAAA	-21	NA	44247086	44253883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44247196_44248616_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_81639.known	chr6	+	2674	12	FSM	ENSG00000096384.20	ENST00000371554.2	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3866.29600222998	2593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	415	False	NA	35	True	AATAAA	-21	NA	44247865	44253883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44248080_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_81663.nic	chr6	+	1196	7	ISM	ENSG00000096384.20	ENST00000371646.10	2555	12	-61	2753	-47	-2753	5prime_fragment	FALSE	canonical	3	11662	junction_5	1160.76245296883	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAACAACATCA	499	False	NA	NA	False	NA	NA	NA	44247039	44251130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047
transcript_81672.known	chr6	-	2063	4	FSM	ENSG00000157593.19	ENST00000619636.4	2063	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	189.520447445652	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	8275	False	NA	-25	True	ATTAAA	-18	NA	44257352	44254101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257181
transcript_81673.known	chr6	-	2022	4	FSM	ENSG00000157593.19	ENST00000393812.4	2022	4	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	17.6131264181639	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCCTGTGTTTTGGTT	-10	True	NA	-24	True	ATTAAA	-19	NA	44257528	44254100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257399
transcript_81674.nic	chr6	-	2358	3	ISM	ENSG00000157593.19	ENST00000619636.4	2063	4	8	0	8	0	intron_retention	FALSE	canonical	3	399	junction_1	3	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	8283	False	NA	-25	True	ATTAAA	-18	NA	44257344	44254101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_44255645_44256341_44256497_44256684
transcript_81675.known	chr6	-	1909	3	FSM	ENSG00000157593.19	ENST00000538577.5	1909	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	178	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	8056	False	NA	-25	True	ATTAAA	-18	NA	44257571	44254101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44255645_44256684_44256879_44257399
transcript_81677.known	chr6	-	2344	6	FSM	ENSG00000146232.17	ENST00000619360.6	2344	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	6.04648658313239	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGGTGCTATGAAGGG	-14	True	NA	-2	True	AATAAA	-17	NA	44265551	44258165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44259285_44260042_44260283_44260450_44260540_44261625_44261849_44262559_44262663_44264981
transcript_81680.known	chr6	-	4798	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_16	12.8120903783866	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGCCCGCCTGGCATC	-17	True	NA	-20	True	AGTAAA	-14	NA	44313347	44298730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_81682.known	chr6	+	6241	16	FSM	ENSG00000096401.8	ENST00000371477.4	6241	16	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_10	23.9707228834584	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCTTTTATGTTTA	-4	True	NA	NA	False	ATTAAA	-19	NA	44387705	44450425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654_44445868_44446606
transcript_81685.nic	chr6	+	2408	15	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-151	4723	-151	-4723	5prime_fragment	FALSE	canonical	3	267	junction_10	19.755133665011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGATGAAAATTTT	5	True	NA	8	True	GATAAA	-44	NA	44387554	44445702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654
transcript_81687.nic	chr6	+	2051	13	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-202	23863	-202	-23863	5prime_fragment	FALSE	canonical	3	267	junction_10	21.0033066179802	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGATCACAATGCTTCA	NA	False	NA	29	True	NA	NA	NA	44387503	44426562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481
transcript_81689.nic	chr6	+	879	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-151	46546	-151	-46546	5prime_fragment	FALSE	canonical	3	280	junction_3	19.6367003338137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGAGGAGTTGATTAT	5	True	NA	26	True	AAGAAA	-8	NA	44387554	44403879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_81690.nic	chr6	+	1078	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-202	46398	-202	-46398	5prime_fragment	TRUE	canonical	3	280	junction_3	19.6367003338137	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGCCTTTCTGATTT	NA	False	NA	7	True	NA	NA	NA	44387503	44404027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_81692.known	chr6	-	3941	9	FSM	ENSG00000196284.17	ENST00000674231.1	3941	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	12.4241448397868	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGTTTACTTGTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	45106008	44826729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921
transcript_81698.nic	chr6	-	2545	2	ISM	ENSG00000196284.17	ENST00000371460.5	2389	13	-70	534261	-50	-112038	5prime_fragment	FALSE	canonical	3	118	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATAAAATATTAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	45378003	45362992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_45365302_45377767
transcript_81699.known	chr6	-	900	4	FSM	ENSG00000231769.4	ENST00000444038.3	900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCTTAAGTGTACTAT	NA	False	NA	NA	False	AATAAA	-21	NA	46129831	46097056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46097347_46102539_46102660_46122947_46123110_46129503
transcript_81700.known	chr6	+	4644	4	FSM	ENSG00000001561.7	ENST00000321037.5	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	3.68178700572909	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCACTGGTGATT	2	True	NA	103	True	AATAAA	-40	NA	46129988	46146688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_46130190_46139550_46140410_46141051_46141223_46143275
transcript_81706.known	chr6	-	3845	5	FSM	ENSG00000112796.10	ENST00000371383.7	3845	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	22.6163657557973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	-16	True	NA	-11	True	AATAAA	-23	NA	46170980	46159184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170052_46170115_46170807
transcript_81710.known	chr6	-	2544	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11.1455023315337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTGGATAAAACA	-7	True	NA	NA	False	ATTAAA	-20	NA	46170971	46160414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
transcript_81714.nic	chr6	-	1869	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-6	4314	3	228	5prime_fragment	FALSE	canonical	3	54	junction_2	8.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGTTTTTACATACAG	-13	True	NA	NA	False	AAAAAG	-15	NA	46170977	46164728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_81716.known	chr6	-	2432	12	FSM	ENSG00000146233.8	ENST00000275016.3	2432	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	2.49627822140836	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGTAGTGGAATCTAT	-14	True	NA	NA	False	AATATA	-18	NA	46652818	46549579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46639493_46639669_46642162_46642299_46652405
transcript_81724.known	chr6	-	1915	12	FSM	ENSG00000146070.17	ENST00000274793.12	1915	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	13.4600725748046	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTGCAATGATACAAGA	12	True	NA	NA	False	ATTAAA	-23	NA	46735375	46704200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735179
transcript_81727.known	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	517	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_47477200_47477600
transcript_81729.known	chr6	+	5412	18	FSM	ENSG00000198087.7	ENST00000359314.5	5412	18	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_9	31.6906544245251	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACCCGTATGACTTT	23	True	NA	NA	False	AATAAA	-24	NA	47477788	47627263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926_47608029_47609122_47609305_47612472_47612537_47624185
transcript_81735.known	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	20.637580338359	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-29	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
transcript_81740.nnic	chr6	-	2835	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-10	-921	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_12	59.7291920997504	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGGAGTGTATTTACGT	38	False	49463301	-3	True	AATAAA	-34	NA	49463263	49431280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_81742.nnic	chr6	-	2743	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-10	-1013	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_12	59.7291920997504	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACTATTCCCATTTGT	38	False	49463301	-95	True	ATTAAA	-16	NA	49463263	49431372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_81745.nnic	chr6	-	2589	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-10	-1167	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_12	59.7291920997504	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTAAAAACTCTCTATAC	38	False	49463301	NA	False	AATAAA	-8	NA	49463263	49431526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_81749.nnic	chr6	+	1714	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-25	-71	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	51.2054684579684	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTATACTGTCTTGGG	4	True	NA	9	True	TATAAA	-18	NA	49463344	49493036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_81750.nnic	chr6	+	1785	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	51.2054684579684	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	4	True	NA	80	True	AATAAA	-20	NA	49463344	49493107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_81751.known	chr6	+	1741	9	FSM	ENSG00000031691.7	ENST00000335783.4	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	30.1700907356939	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	-22	True	NA	80	True	AATAAA	-20	NA	49463369	49493107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_81753.nnic	chr6	+	455	5	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-25	-20287	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	70.2117333499181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATACAATACCATCT	4	True	NA	NA	False	ATTAAA	-7	NA	49463344	49472820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789
transcript_81767.known	chr6	-	3068	17	FSM	ENSG00000112118.20	ENST00000596288.7	3068	17	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_6	191.805148115868	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	-9	True	NA	-11	True	AATAAA	-23	NA	52284742	52264014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_81768.known	chr6	-	2523	16	FSM	ENSG00000112118.20	ENST00000419835.8	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_15	681.767083068371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCGTCTCTGAACTTG	NA	False	NA	NA	False	NA	NA	NA	52284881	52264585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52284596
transcript_81772.known	chr6	-	3208	17	FSM	ENSG00000112118.20	ENST00000616552.4	3208	17	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_6	191.805148115868	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTCATAGTGTGTT	NA	False	NA	-10	True	AATAAA	-24	NA	52284881	52264013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_81781.known	chr6	+	6849	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	9.8264947972306	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	-17	True	NA	33	True	AATAAA	-30	NA	52420341	52497198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_81783.known	chr6	+	1829	10	FSM	ENSG00000096093.16	ENST00000636379.1	1829	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.0052578328237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGATTGGTGCCTTA	20	True	NA	4	True	ACTAAA	-14	NA	52420378	52492503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_81784.known	chr6	+	2089	9	FSM	ENSG00000096093.16	ENST00000637263.1	2089	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	10.2225241501304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTCATGTGTATT	26	True	NA	4	True	CATAAA	-16	NA	52420313	52480139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639
transcript_81788.known	chr6	+	1896	6	FSM	ENSG00000096093.16	ENST00000637200.1	1896	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.9809711939578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATATCAGTCATATAT	-34	True	NA	NA	False	NA	NA	NA	52420253	52453543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52429968_52430132_52430227_52430375_52438303_52438592_52452687
transcript_81790.nic	chr6	+	1816	5	ISM	ENSG00000096093.16	ENST00000635866.1	2301	12	27	38762	3	81	5prime_fragment	FALSE	canonical	1	1	junction_3	42.2869660770314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTGTTTATATTATT	-7	True	NA	NA	False	NA	NA	NA	52420280	52453637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_52420474_52423945_52424168_52429968_52430132_52438303_52438592_52452687
transcript_81793.nnic	chr6	+	1440	4	NIC	ENSG00000096093.16	novel	3509	11	NA	NA	0	81	intron_retention	FALSE	canonical	1	1	junction_3	39.3389826451518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTGTTTATATTATT	-10	True	NA	NA	False	NA	NA	NA	52420277	52453637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_52420474_52423945_52424168_52438303_52438376_52452687
transcript_81795.known	chr6	+	4004	10	FSM	ENSG00000096093.16	ENST00000637340.1	4004	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	8.14831649657738	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGATCTAAGATTGGT	NA	False	NA	-2	True	ACTAAA	-8	NA	52419742	52492497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_81798.known	chr6	+	2133	11	FSM	ENSG00000096093.16	ENST00000637089.1	2133	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	25.4025589262184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATACACTCCTTAAGTT	1	True	NA	-3	True	AATAAA	-12	NA	52420288	52495768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52495608
transcript_81799.known	chr6	+	2744	3	FSM	ENSG00000225791.7	ENST00000663931.1	2744	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	NA	False	NA	7	True	AATAAA	-8	NA	52577203	52583980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52578595_52579374_52579610_52582862
transcript_818.nnic	chr1	+	490	5	NNC	ENSG00000011021.23	novel	814	6	NA	NA	-9	-2655	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	65.8786763680024	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTCAGGGTATTTATT	7	True	NA	NA	False	AATAAA	-18	NA	11806203	11818124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11817972
transcript_81800.known	chr6	+	2500	3	FSM	ENSG00000225791.7	ENST00000606714.6	2500	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAATTGATCTGCTTTT	NA	False	NA	20	True	AATAAA	-21	NA	52577259	52583993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52578394_52579374_52579610_52582862
transcript_81801.known	chr6	+	3589	3	FSM	ENSG00000216775.4	ENST00000643631.2	3591	3	0	2	0	-2	multi-exon	FALSE	canonical	3	73	junction_2	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTATTTTATTTT	148	False	NA	20	True	AATAAA	-16	NA	52664365	52669153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52665420_52666388_52666519_52666748
transcript_81802.known	chr6	+	3757	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	0	True	NA	22	True	AATAAA	-18	NA	52664429	52669155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52665420_52666388
transcript_81808.nnic	chr6	+	945	5	NNC	ENSG00000096092.6	novel	988	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	107.019857970379	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	-40	True	NA	17	True	AATAAA	-18	NA	52671085	52686588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_52671176_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_81809.known	chr6	+	988	5	FSM	ENSG00000096092.6	ENST00000211314.5	988	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	19.0065778087482	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	-13	True	NA	17	True	AATAAA	-18	NA	52671112	52686588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_52671246_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_81812.known	chr6	-	1221	7	FSM	ENSG00000244067.3	ENST00000493422.3	1221	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7.34090518184841	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTGTCTGCTGTGGAT	0	True	NA	NA	False	GATAAA	-31	NA	52763475	52750086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52750700_52751576_52751709_52752853_52752996_52754942_52755076_52756257_52756310_52757860_52757978_52763443
transcript_81814.known	chr6	-	1218	7	FSM	ENSG00000243955.6	ENST00000334575.6	1218	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.22812904711937	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGATTCTGTCTGCTGTG	-1	True	NA	NA	False	GATAAA	-28	NA	52803816	52791370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52791981_52792855_52792988_52794124_52794267_52796181_52796315_52797585_52797638_52799180_52799298_52803784
transcript_81816.known	chr6	-	1240	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	17.4037033096088	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	27	True	NA	-14	True	AATAAA	-17	NA	52995284	52977952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
transcript_81817.nnic	chr6	-	1391	7	NNC	ENSG00000170899.11	novel	1240	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	62.0796978801354	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	16	True	NA	-14	True	AATAAA	-17	NA	52995295	52977952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994402_52995248
transcript_81821.known	chr6	-	1127	6	FSM	ENSG00000170899.11	ENST00000477599.5	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.4726611302682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	7	True	NA	-14	True	AATAAA	-17	NA	52995304	52977952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52987356_52987409_52994156_52994262_52995248
transcript_81822.nic	chr6	-	2116	6	NIC	ENSG00000170899.11	novel	1240	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	143	junction_4	17.9108905417905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-4	True	NA	-14	True	AATAAA	-17	NA	52995315	52977952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_52978593_52982573_52982706_52984463_52985584_52987356_52987409_52994156_52994262_52995248
transcript_81828.known	chr6	+	1580	13	FSM	ENSG00000112146.17	ENST00000370939.7	1580	13	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	125.798339505028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTAAGTTATAAATGTG	14	False	NA	28	True	ATTAAA	-18	NA	53064997	53097888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_53065209_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_81830.known	chr6	+	4743	13	FSM	ENSG00000112146.17	ENST00000323557.12	4743	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	98.8078944214479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCATACTTCTTGTAT	-8	True	NA	5	True	AATAAA	-17	NA	53065403	53100873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_81833.known	chr6	-	2765	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_4	32.7326835353989	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTGCATTTTACAT	-12	True	NA	-16	True	ATTAAA	-14	NA	53348950	53267403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_81836.known	chr6	-	2875	7	FSM	ENSG00000012660.14	ENST00000542638.5	2875	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	323.261890732576	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTTACATTTTTTG	NA	False	NA	-10	True	ATTAAA	-20	NA	53349179	53267397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53269271_53270592_53270728_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_81838.known	chr6	-	580	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	406.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAGATTTGTGTGTATT	12	True	NA	-17	True	AATAAA	-32	NA	53348926	53294087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53294492_53295641_53295708_53348816
transcript_81839.known	chr6	-	3785	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_11	22.3262675389825	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTGTGTGTGAGTT	-1	True	NA	-4	True	AATAAA	-28	NA	53545101	53497340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
transcript_81844.known	chr6	-	1800	15	FSM	ENSG00000001084.13	ENST00000513939.6	1800	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	75.9330061868449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTCTACAGAAAGAAAAA	455	False	NA	NA	False	AGTAAA	-35	NA	53544645	53498755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53520777_53520961_53522414_53522528_53544495
transcript_81845.known	chr6	-	2356	6	FSM	ENSG00000001084.13	ENST00000514004.5	2356	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	19.8736005796635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTTCGACTTTTAAC	7	True	NA	NA	False	AATAAA	-28	NA	53545033	53512988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
transcript_81846.known	chr6	-	2289	16	FSM	ENSG00000001084.13	ENST00000643939.1	2289	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	73.1207828793489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGACTACCTGGGAC	467	False	NA	-67	True	NA	NA	NA	53544633	53498386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516241_53520777_53520961_53522414_53522528_53544495
transcript_81847.known	chr6	+	3159	14	FSM	ENSG00000137269.15	ENST00000370888.6	3159	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_6	15.1411504803903	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTTTTTAAAATTATTAC	21	True	NA	15	True	AATAAA	-23	NA	53795004	53924125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_53795416_53842109_53842228_53878992_53879072_53882886_53882977_53896497_53896555_53896828_53896893_53897284_53897360_53899746_53899892_53902628_53902748_53904378_53904463_53913853_53913970_53919497_53919671_53920624_53920762_53922634
transcript_81848.known	chr6	-	514	4	FSM	ENSG00000227885.3	ENST00000662688.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	NA	False	NA	NA	False	AATAAA	-19	NA	53794319	53746408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53794172
transcript_81849.known	chr6	-	483	3	FSM	ENSG00000227885.3	ENST00000429053.1	483	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTCTAGAACCTGTT	NA	False	NA	NA	False	TATAAA	-43	NA	53794274	53790874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_53791189_53793282_53793350_53794172
transcript_81851.nic	chr6	+	1659	2	ISM	ENSG00000168143.9	ENST00000306858.8	6244	5	-29	73339	-29	-73339	5prime_fragment	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTATAGGCA	-17	True	NA	NA	False	NA	NA	NA	54846741	54871760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_54846827_54870186
transcript_81852.known	chr6	-	4173	30	FSM	ENSG00000124749.17	ENST00000244728.10	4173	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	6.49082403633238	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-24	True	NA	NA	False	AATAAA	-18	NA	56247580	56056589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56164813_56164823_56166905_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
transcript_81855.known	chr6	+	2789	4	FSM	ENSG00000168116.14	ENST00000370733.5	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	58.7896438347965	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGGCTCTTGTCTTT	-1	True	NA	24	True	AATAAA	-25	NA	57046692	57055225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685
transcript_81859.known	chr6	+	2883	3	FSM	ENSG00000168116.14	ENST00000545356.5	2883	3	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	62.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTCATTTCCATATC	NA	False	NA	38	True	AATAAA	-39	NA	57046531	57055239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57046777_57047312_57047397_57052685
transcript_81862.known	chr6	+	5088	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	60.5099502696264	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	26	True	NA	14	True	AGTAAA	-20	NA	57090187	57170305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_81866.known	chr6	-	2546	7	FSM	ENSG00000112210.12	ENST00000317483.4	2546	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	65.4974554213113	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTCATTATATT	9	True	NA	NA	False	AATAAA	-18	NA	57221407	57188782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221318
transcript_81869.known	chr6	+	375	4	FSM	ENSG00000112200.17	ENST00000370710.10	375	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	184.575789913581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCCTTTAACCTTGTC	45	False	NA	NA	False	NA	NA	NA	57090206	57099610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57099468
transcript_81871.known	chr6	+	4998	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	92.1278376037257	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	NA	False	NA	15	True	ATTAAA	-17	NA	57090029	57170201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_81874.known	chr6	+	6651	3	FSM	ENSG00000112208.11	ENST00000370693.5	6651	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	16.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGGTTTTATAAGTG	6	True	NA	5	True	AATAAA	-16	NA	57172325	57189833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57172811_57182031_57182142_57183777
transcript_81878.known	chr6	+	2561	16	FSM	ENSG00000146143.19	ENST00000672107.1	2561	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	63.2671232860234	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	7	True	NA	27	True	AATAAA	-13	NA	57317629	57646850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57398004_57398123_57402128_57402269_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_81882.known	chr6	+	2303	14	FSM	ENSG00000146143.19	ENST00000615550.5	2303	14	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	15.7960372530394	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	7	True	NA	27	True	AATAAA	-13	NA	57317629	57646850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_81889.nic	chr6	+	1252	11	NIC	ENSG00000146143.19	novel	2303	14	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	42.708898370246	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTCTTTTCTTGCC	NA	False	NA	NA	False	ATTAAA	-16	NA	57317594	57587111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57586995
transcript_81893.known	chr6	+	2197	7	FSM	ENSG00000146143.19	ENST00000419977.4	2197	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	5.7662812973354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCATGTGGGATGAAG	5	True	NA	NA	False	AAAAAG	-27	NA	57317627	57383589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030
transcript_81894.known	chr6	+	1266	6	FSM	ENSG00000146143.19	ENST00000671770.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	53.7564879805219	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCCTGTTATTTA	7	True	NA	NA	False	AATAAA	-17	NA	57317629	57378976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57378250
transcript_81898.known	chr6	+	864	5	FSM	ENSG00000146143.19	ENST00000274891.10	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	4.58257569495584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAAGTGGTAGTTTCTT	1	True	NA	NA	False	AATAAA	-19	NA	57317623	57326363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924
transcript_81899.known	chr6	-	1666	6	FSM	ENSG00000215190.9	ENST00000418368.1	1666	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.30555310817378	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	6	True	NA	-6	True	AATAAA	-20	NA	57961380	57946077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_57947178_57948872_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
transcript_81901.known	chr6	-	1088	5	FSM	ENSG00000215190.9	ENST00000418765.6	1088	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.63216876123687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACAAGCCTGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	57961424	57946546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_57947178_57948872_57949069_57959027_57959112_57961151_57961225_57961320
transcript_81905.known	chr6	-	2329	9	FSM	ENSG00000112232.10	ENST00000281156.5	2329	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59.6896923681133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAAGCTTTATCTTGC	-29	True	NA	-13	True	AATAAA	-15	NA	62286225	61679960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_61681061_61697194_61697254_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_81907.nnic	chr6	-	1763	9	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	0	-20298	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	46.8954955192927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATACCACTTGATGCTGT	-29	True	NA	-9	True	AATAAA	-15	NA	62286225	61700258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_8191.nic	chr1	-	2138	9	NIC	ENSG00000158850.15	novel	1933	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_8	137.724362405495	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	-8	True	NA	-27	True	AATAAA	-16	NA	161177517	161171309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161176911_161177107_161177422
transcript_81910.nnic	chr6	-	1756	7	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	0	-69054	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	63.3377191463875	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	-29	True	NA	NA	False	NA	NA	NA	62286225	61749014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_61749684_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_81911.nnic	chr6	-	1510	7	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	0	-147045	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	57.9475337410201	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCAATTATTTCCT	-29	True	NA	0	True	AGTAAA	-18	NA	62286225	61827005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_61827429_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_81912.known	chr6	-	673	6	FSM	ENSG00000250686.2	ENST00000511849.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	5.57135531087365	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTTTTTGTATTTCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	61681049	61630232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_61630502_61652254_61652318_61659116_61659151_61661281_61661365_61678886_61678948_61680886
transcript_81913.known	chr6	+	4628	6	FSM	ENSG00000285976.2	ENST00000370651.7	4628	6	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_5	61.2418157797432	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGATTTTATTTTCAG	147	False	NA	5	True	AATAAA	-17	NA	63572471	63583587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_63572720_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
transcript_81915.known	chr6	-	1404	1	FSM	ENSG00000266680.1	ENST00000584934.1	1404	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTAAAATCTTAAATTC	1189	False	NA	NA	False	AATAAA	-18	NA	63572408	63571004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_63571000_63572400
transcript_81919.known	chr6	+	7124	17	FSM	ENSG00000118482.12	ENST00000509876.5	7124	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	49.5477988915754	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGACTTGAA	12	True	NA	14	True	GATAAA	-16	NA	63636110	63714454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_63636151_63646526_63646796_63678827_63679021_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_81920.known	chr6	+	18797	16	FSM	ENSG00000118482.12	ENST00000262043.8	18797	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	35.8040345336791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATACTTTATTTCATAT	-18	True	NA	NA	False	ATTAAA	-15	NA	63635801	63726011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_63636151_63646526_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_81922.known	chr6	+	2787	6	FSM	ENSG00000118482.12	ENST00000481385.6	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	35.0108554594143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAAGTTGAAAA	3	True	NA	13	True	NA	NA	NA	63635822	63698245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222
transcript_81926.nnic	chr6	+	367	3	Antisense	novelGene_ENSG00000188107.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_2	1	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGGTTTACATATTTG	NA	False	NA	30	True	AATAAA	-42	NA	64878500	64916496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_+_64878581_64886655_64886769_64916322
transcript_81928.nic	chr6	-	1229	2	ISM	ENSG00000230910.5	ENST00000667769.1	888	4	-26	0	2	0	intron_retention	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGCTTTCATTGGTCT	152	False	NA	NA	False	ATTAAA	-21	NA	68635019	68632662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_68633057_68634184
transcript_81929.known	chr6	-	2365	1	FSM	ENSG00000230910.5	ENST00000604392.1	2365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGCTTTCATTGGTCT	144	False	NA	NA	False	ATTAAA	-21	NA	68635027	68632662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_68632700_68635000
transcript_81930.known	chr6	-	2358	17	FSM	ENSG00000168216.13	ENST00000649673.1	2358	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	104.393617351589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTATCTGTGCCTTAGG	7	True	NA	32	True	AATAAA	-3	NA	69796896	69675819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69708849_69709232_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_81932.known	chr6	-	1934	16	FSM	ENSG00000168216.13	ENST00000648743.1	1934	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	82.60562262273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAATCATGCTATGTAA	-2	True	NA	NA	False	TTTAAA	-3	NA	69796608	69675972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796413
transcript_81933.known	chr6	-	3900	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	34.7118935749054	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGTGGCATTTTGT	-17	True	NA	NA	False	AATAAA	-19	NA	69797010	69674009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_81937.known	chr6	-	1812	15	FSM	ENSG00000168216.13	ENST00000647650.1	1812	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	85.570981396399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTGCAAAATTTTTT	-3	True	NA	-74	True	AATATA	-23	NA	69796906	69675925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_81938.known	chr6	-	1692	14	FSM	ENSG00000168216.13	ENST00000650124.1	1692	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	113.144825243092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTCCCTTTTGTCACT	18	True	NA	-8	True	ATTAAA	-14	NA	69796885	69675859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700803_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69780493_69780555_69790295_69790473_69796812
transcript_81942.known	chr6	-	1984	16	FSM	ENSG00000168216.13	ENST00000370570.6	1984	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	82.60562262273	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCTGTATCTGTGCCTT	525	False	NA	29	True	AAAACA	-7	NA	69796585	69675822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796490
transcript_81944.known	chr6	-	2957	33	FSM	ENSG00000112280.18	ENST00000683980.1	2957	33	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	34.5316883456341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAACATTACTTAACTA	160	False	NA	-30	True	TATAAA	-44	NA	70283105	70216059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254739_70254770_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_81946.known	chr6	-	3051	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_28	12.6477943275797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	56	False	NA	-10	True	ATTAAA	-14	NA	70283209	70216039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_81947.known	chr6	-	2849	32	FSM	ENSG00000112280.18	ENST00000684176.1	2849	32	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_31	28.4183845171395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAAGAAGAAATAAATAT	225	False	NA	37	True	TTTAAA	-26	NA	70283040	70216155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282897
transcript_81959.nic	chr6	+	2032	16	NIC	ENSG00000082269.17	novel	6215	22	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	42.1025203785025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAATTAATAAAACA	-13	True	NA	NA	False	AATGAA	-11	NA	70413482	70524599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342
transcript_81973.nic	chr6	+	2073	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-95	77694	-25	-21995	5prime_fragment	FALSE	canonical	3	106	junction_3	31.4925035171512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	-13	True	NA	NA	False	AATAAA	-21	NA	70413482	70482965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
transcript_81978.nic	chr6	+	2022	9	ISM	ENSG00000082269.17	ENST00000515323.5	1926	14	23	41634	23	-21995	5prime_fragment	FALSE	canonical	3	25	junction_1	54.4351678604925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	-48	True	NA	NA	False	AATAAA	-21	NA	70413447	70482965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70413703_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
transcript_81979.nic	chr6	+	1722	9	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-95	79018	-25	-23319	5prime_fragment	FALSE	canonical	3	106	junction_3	33.3091578998929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAATTAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	70413482	70481641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900
transcript_8198.nic	chr1	-	1882	8	NIC	ENSG00000158850.15	novel	1933	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_7	120.42289429086	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	-18	True	NA	-27	True	AATAAA	-16	NA	161177527	161171309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176509_161177422
transcript_81984.nic	chr6	+	1644	4	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-95	131112	-25	1203	5prime_fragment	FALSE	canonical	3	106	junction_3	33.5095342982992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTTAGGAAATTGGAT	-13	True	NA	NA	False	AATAAA	-14	NA	70413482	70429547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303
transcript_81985.nnic	chr6	+	834	3	NNC	ENSG00000082269.17	novel	595	4	NA	NA	-25	-8964	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	87.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCCTTTACCATCTCTT	-13	True	NA	NA	False	AATAAA	-24	NA	70413482	70417807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70413703_70415290_70415377_70417279
transcript_81986.nic	chr6	+	1286	3	ISM	ENSG00000082269.17	ENST00000514185.5	529	5	542	795	-25	778	internal_fragment	FALSE	canonical	3	37	junction_2	71	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATATTGTAAAACTAC	-13	True	NA	NA	False	NA	NA	NA	70413482	70427549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70413703_70415290_70415377_70426569
transcript_81987.known	chr6	+	6215	22	FSM	ENSG00000082269.17	ENST00000418814.7	6215	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	37.9479294754526	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTAATCCTTTGCTTA	12	True	NA	26	True	AATAAA	-34	NA	70413507	70561174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
transcript_81988.known	chr6	+	1622	2	FSM	ENSG00000082269.17	ENST00000505675.1	1622	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCTTGTAATCCTTTGC	NA	False	NA	23	True	AATAAA	-31	NA	70556697	70561171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70556864_70559715
transcript_81991.nnic	chr6	+	755	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5235010054732	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	NA	False	NA	19	True	AATAAA	-16	NA	70566890	70589569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588859_70589325
transcript_81992.nnic	chr6	+	825	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5235010054732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	NA	False	NA	19	True	AATAAA	-16	NA	70566890	70589569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588884_70589280
transcript_81993.nnic	chr6	+	844	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5235010054732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	NA	False	NA	19	True	AATAAA	-16	NA	70566890	70589569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588907_70589284
transcript_81994.nnic	chr6	+	869	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5235010054732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	NA	False	NA	19	True	AATAAA	-16	NA	70566890	70589569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588932_70589284
transcript_81995.nnic	chr6	+	892	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5235010054732	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	NA	False	NA	19	True	AATAAA	-16	NA	70566890	70589569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588955_70589284
transcript_81996.nnic	chr6	+	924	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5235010054732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	NA	False	NA	19	True	AATAAA	-16	NA	70566890	70589569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_70567005_70579413_70579567_70588614_70588982_70589279
transcript_81999.known	chr6	+	1183	3	FSM	ENSG00000154079.6	ENST00000370474.4	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	6	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	10	True	NA	19	True	AATAAA	-16	NA	70566929	70589569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70567005_70579413_70579567_70588614
transcript_82.known	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_+_1100_1600
transcript_82001.known	chr6	+	332	2	FSM	ENSG00000154079.6	ENST00000468640.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAATTTTATTTATTTA	-3	True	NA	62	True	AATACA	-23	NA	70566916	70567659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70567005_70567415
transcript_82002.known	chr6	+	2403	10	FSM	ENSG00000112305.15	ENST00000316999.9	2403	10	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_4	47.9351413659935	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCATTTGTGGGTTT	-18	True	NA	17	True	ATTAAA	-14	NA	70667775	70861166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_82006.nic	chr6	+	493	4	ISM	ENSG00000112305.15	ENST00000370452.7	2491	11	169	87741	62	-18344	5prime_fragment	FALSE	canonical	3	311	junction_1	20.4178571081514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACCTTCATCTC	48	False	NA	NA	False	GATAAA	-22	NA	70667944	70773425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349
transcript_82009.known	chr6	-	1430	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	9.41740410091868	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	7920	False	NA	-3	True	AATAAA	-22	NA	73310215	73241313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
transcript_8201.known	chr1	-	1871	8	FSM	ENSG00000158850.15	ENST00000367998.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	125.306318553327	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	12	True	NA	-29	True	AATAAA	-14	NA	161177497	161171311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176509_161177422
transcript_82016.known	chr6	-	2053	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTGGCTATTATTGTC	7992	False	NA	NA	False	AATAAA	-12	NA	73310143	73274138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73275557_73291997_73292041_73309551
transcript_82018.known	chr6	-	659	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCAGTGTGGTTGATGG	-7	True	NA	NA	False	AATAAA	-17	NA	73354276	73353062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73353379_73353852_73354033_73354113
transcript_82019.known	chr6	+	1037	3	FSM	ENSG00000203908.4	ENST00000370367.4	1037	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGTCTGTATTTTGGAA	-1	True	NA	NA	False	AATAAA	-14	NA	73362657	73364171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73362899_73363094_73363275_73363555
transcript_82020.known	chr6	+	3720	13	FSM	ENSG00000135297.17	ENST00000680289.1	3720	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.7336338296987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-21	True	NA	NA	False	NA	NA	NA	73461726	73502427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_82022.known	chr6	+	3618	12	FSM	ENSG00000135297.17	ENST00000680686.1	3618	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	50.1394748890409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_82024.known	chr6	+	10698	12	FSM	ENSG00000135297.17	ENST00000498286.6	10698	12	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	20.2631449020707	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTCTATTTCGCTTTA	-11	True	NA	NA	False	AATAAA	-20	NA	73461736	73509236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_82026.known	chr6	+	4147	12	FSM	ENSG00000135297.17	ENST00000680570.1	4147	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	72.1882296213709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480368_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_82028.known	chr6	+	3973	12	FSM	ENSG00000135297.17	ENST00000679592.1	3973	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	59.9596282909875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	7	True	NA	NA	False	NA	NA	NA	73461754	73502427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462174_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_82029.known	chr6	+	3328	11	FSM	ENSG00000135297.17	ENST00000680609.1	3328	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	75.9921706493505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_82031.known	chr6	+	3690	11	FSM	ENSG00000135297.17	ENST00000679905.1	3690	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	61.0455567588666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_82035.known	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	7809.54682110431	65750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	6706	False	NA	-5	True	ATTAAA	-17	NA	73520214	73517514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
transcript_82037.known	chr6	-	3694	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	0	0	0	multi-exon	FALSE	canonical	2	218	junction_7	7746.22119329872	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAGCTTTAAGATGA	6329	False	NA	-21	True	AATAAA	-3	NA	73520591	73515764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
transcript_82038.known	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	7816.01719652193	65729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5935	False	NA	-5	True	ATTAAA	-17	NA	73520985	73517514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
transcript_82039.known	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_7	7595.85713076677	65961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5080	False	NA	-5	True	ATTAAA	-17	NA	73521840	73517514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
transcript_82040.known	chr6	-	2079	8	FSM	ENSG00000156508.19	ENST00000455918.2	2079	8	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_7	7789.11602749605	65897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	3105	False	NA	-9	True	ATTAAA	-13	NA	73523815	73517518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523446
transcript_82041.known	chr6	-	1823	8	FSM	ENSG00000156508.19	ENST00000677236.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	1	220	junction_7	7745.54043120482	65898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	12	True	NA	-9	True	ATTAAA	-13	NA	73523837	73517518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523724
transcript_82043.known	chr6	-	1731	8	FSM	ENSG00000156508.19	ENST00000678703.1	1731	8	0	0	0	0	multi-exon	FALSE	canonical	2	215	junction_6	7817.65402986166	135880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAACCTGTGTGTTCCT	15	True	NA	-12	True	ATTAAA	-10	NA	73521032	73517521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519508_73519882_73520057_73520999
transcript_82044.known	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2625.46944479565	66013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	15	True	NA	-5	True	ATTAAA	-17	NA	73521032	73517514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
transcript_82045.known	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3054.38335293176	65496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	16	True	NA	-9	True	ATTAAA	-13	NA	73521031	73517518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
transcript_82046.known	chr6	-	1849	7	FSM	ENSG00000156508.19	ENST00000495333.6	1849	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3055.07144851893	65502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	15	True	NA	-11	True	ATTAAA	-11	NA	73521032	73517520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519517_73519882_73520057_73520999
transcript_82047.known	chr6	-	2109	7	FSM	ENSG00000156508.19	ENST00000491404.2	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2978.31792572027	65678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	15	True	NA	-9	True	ATTAAA	-13	NA	73521032	73517518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73520057_73520999
transcript_82048.known	chr6	-	3292	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.46361453145678	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-26	True	NA	-7	True	AATAAA	-15	NA	73653992	73593378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_82050.nnic	chr6	-	1059	7	NNC	ENSG00000119899.13	novel	734	5	NA	NA	3	12553	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.089476604722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACAGGACCTTCCAAT	-23	True	NA	-10	True	AATAAA	-22	NA	73653989	73622679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_73622817_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_82057.known	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3113.95464892403	2833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-8	True	NA	-22	True	AATAAA	-16	NA	75243801	75237786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
transcript_82058.known	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	2861.72818803992	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	6	True	NA	-22	True	AATAAA	-16	NA	75243787	75237786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
transcript_82059.known	chr6	-	325	3	FSM	ENSG00000112695.13	ENST00000472311.6	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	2847	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAACTGCCACCAATAA	8	True	NA	-58	True	GATAAA	-40	NA	75243785	75237822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75241175_75241266_75243716
transcript_82060.known	chr6	-	357	3	FSM	ENSG00000112695.13	ENST00000460985.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	3235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTCTGATTTTATCA	5	True	NA	-24	True	AATAAA	-14	NA	75243788	75237788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75237989_75240300_75240386_75243716
transcript_82061.known	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	TRUE	canonical	3	722	junction_2	72.4931031202279	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-26	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
transcript_82064.known	chr6	-	3764	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAACAGAGTTTTACTT	0	True	NA	-2	True	AATAAA	-22	NA	75334790	75308087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_75308898_75312396_75315203_75334642
transcript_82069.known	chr6	+	6671	24	FSM	ENSG00000112701.18	ENST00000447266.7	6671	24	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	90.5783141921418	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAAGAGTTTGGTGG	0	True	NA	NA	False	AATAAA	-21	NA	75601879	75718281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_82074.known	chr6	+	4644	23	FSM	ENSG00000112701.18	ENST00000370010.6	4644	23	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_5	97.1188247236471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	7	True	AATAAA	-19	NA	75601508	75715904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_82082.known	chr6	+	3122	28	FSM	ENSG00000196586.17	ENST00000627432.3	3122	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	60.4440586407441	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCAAAGAGAAAACAA	-4	True	NA	0	True	NA	NA	NA	75749235	75891238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227
transcript_82084.nic	chr6	+	3061	27	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-33	1056	1	0	5prime_fragment	FALSE	canonical	0	0	junction_10	61.547319074084	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAAGAAGAAATGGAAAA	840	False	NA	-54	True	AAAACA	-32	NA	75749202	75890182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_82090.nic	chr6	+	2640	24	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	20	9420	-6	-5089	5prime_fragment	FALSE	canonical	0	0	junction_10	64.955648675816	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTTTTCCTTTACAC	-2	True	NA	23	True	AAGAAA	-32	NA	75749255	75881818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688
transcript_82092.nic	chr6	+	988	9	ISM	ENSG00000196586.17	ENST00000663400.1	3140	27	2	48888	1	-45625	5prime_fragment	FALSE	canonical	3	178	junction_8	21.1863015885265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAGAAATTATCATAT	840	False	NA	NA	False	NA	NA	NA	75749202	75841282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213
transcript_82093.known	chr6	+	627	2	FSM	ENSG00000280511.1	ENST00000626131.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGACTCTCTTTTCGG	NA	False	NA	-41	True	TATAAA	-21	NA	76561327	76562590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_76561668_76562303
transcript_82094.known	chr6	-	11926	40	FSM	ENSG00000146247.14	ENST00000275034.5	11926	40	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_30	40.6106899643676	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGCTTTGCATTA	8	True	NA	0	True	AATAAA	-22	NA	79078254	78934418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78955683_78958474_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_82096.nnic	chr6	-	3042	24	NNC	ENSG00000146247.14	novel	11926	40	NA	NA	-38	-42355	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	62.2176799434255	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACAAAAGGTTTG	NA	False	NA	NA	False	AAAAAG	-36	NA	79078292	78982900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79004372_79004437_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_82098.nnic	chr6	-	2978	24	NNC	ENSG00000146247.14	novel	11926	40	NA	NA	-38	-42419	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	62.2176799434255	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAAGTAAATG	NA	False	NA	NA	False	ATTAAA	-3	NA	79078292	78982964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79004372_79004437_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_82099.nic	chr6	-	2978	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-38	48482	-38	-42355	5prime_fragment	FALSE	canonical	3	187	junction_13	25.5477190843571	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACAAAAGGTTTG	NA	False	NA	NA	False	AAAAAG	-36	NA	79078292	78982900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_8210.known	chr1	+	813	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	132.393353307483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	13	True	NA	12	True	AATAAA	-18	NA	161166469	161171220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
transcript_82100.nic	chr6	-	2914	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-38	48546	-38	-42419	5prime_fragment	FALSE	canonical	3	187	junction_13	25.5477190843571	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAAGTAAATG	NA	False	NA	NA	False	ATTAAA	-3	NA	79078292	78982964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_82104.nnic	chr6	-	2580	21	NNC	ENSG00000146247.14	novel	11926	40	NA	NA	-38	-50349	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	62.1960408707821	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATAAAATACCCACTGT	NA	False	NA	62	True	AAGAAA	-20	NA	79078292	78990894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79004372_79004437_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_82106.nic	chr6	-	2516	20	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-38	56476	-38	-50349	5prime_fragment	FALSE	canonical	3	187	junction_10	19.1051906624694	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATAAAATACCCACTGT	NA	False	NA	62	True	AAGAAA	-20	NA	79078292	78990894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_82108.nic	chr6	-	2452	20	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-38	56540	-38	-50413	5prime_fragment	FALSE	canonical	3	187	junction_10	19.1051906624694	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAGAAGAAGAAATAAAGA	NA	False	NA	-2	True	NA	NA	NA	79078292	78990958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_82111.known	chr6	+	5577	4	FSM	ENSG00000146243.14	ENST00000369940.7	5577	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4.98887651569859	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGTAAGTTGGTTC	4	True	NA	17	True	AATGAA	-18	NA	78867550	78903102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_78867892_78885377_78885444_78897828_78897960_78898063
transcript_82120.known	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_1	1191.48942085106	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_82124.known	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2691	junction_1	729.049627940376	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_82133.nic	chr6	-	1450	5	NIC	ENSG00000118418.14	novel	872	6	NA	NA	20	0	intron_retention	FALSE	canonical	3	4244	junction_3	142.007702255899	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-47	True	NA	-6	True	AATAAA	-21	NA	79234718	79201244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_8214.known	chr1	-	1933	8	FSM	ENSG00000158850.15	ENST00000319769.10	1933	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	48.9051560238211	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	2	True	NA	-27	True	AATAAA	-16	NA	161177507	161171309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
transcript_82140.known	chr6	-	1010	7	FSM	ENSG00000118418.14	ENST00000620514.1	1010	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2097.20253485976	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTGACTCTTAGTA	NA	False	NA	-10	True	AATAAA	-17	NA	79234738	79201248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79201727_79202062_79202156_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_82142.nnic	chr6	-	2283	8	NIC	ENSG00000135338.14	novel	4719	9	NA	NA	28	535	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	7.80894306783797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGATGGAACAGTTAT	0	True	NA	NA	False	AGTAAA	-39	NA	79537402	79487292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537115
transcript_82143.known	chr6	-	4564	8	FSM	ENSG00000135338.14	ENST00000369846.9	4564	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.30471976380553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTCTTTATTTAAGT	2	True	NA	0	True	AATAAA	-14	NA	79537430	79484990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537164
transcript_82146.nic	chr6	-	1630	7	ISM	ENSG00000135338.14	ENST00000369846.9	4564	8	-11	4162	-11	-1325	5prime_fragment	FALSE	canonical	3	13	junction_3	4.50924975282289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAAAATTTGTTACA	38	False	NA	NA	False	NA	NA	NA	79537441	79489152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537164
transcript_82149.known	chr6	+	4603	4	FSM	ENSG00000198478.8	ENST00000369838.6	4603	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	8.99382504215469	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTCTGTCACCTCC	0	True	NA	20	True	AATAAA	-16	NA	79631328	79703655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_79631507_79673613_79673800_79696484_79696566_79699497
transcript_8215.known	chr1	+	784	2	FSM	ENSG00000143224.18	ENST00000466452.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTCATTCATGAAAATA	2676	False	NA	-27	True	NA	NA	NA	161170260	161171181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161170770_161170906
transcript_82155.known	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_8	33.7863099380359	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	-6	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_82156.known	chr6	+	3477	22	FSM	ENSG00000112742.10	ENST00000230510.7	3477	22	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	97.4750156953424	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	NA	False	NA	25	True	AATAAA	-30	NA	80004146	80042527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80004714_80005829_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026380_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_82161.known	chr6	+	1514	11	FSM	ENSG00000083123.15	ENST00000356489.9	1514	11	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_10	67.1997767853436	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCAAATTGTCTTTG	8	True	NA	-13	True	AATAAA	-1	NA	80106646	80346254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80345974
transcript_82165.known	chr6	+	3668	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	38.7817571979149	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	-6	True	NA	3	True	AATAAA	-17	NA	80106670	80346270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
transcript_82166.known	chr6	-	5664	3	FSM	ENSG00000112773.16	ENST00000369754.7	5664	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	515	False	NA	-1	True	AATAAA	-22	NA	81752708	81745729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_81750472_81751589_81752179_81752375
transcript_82167.known	chr6	-	5582	3	FSM	ENSG00000112773.16	ENST00000320172.11	5582	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	-7	True	NA	-1	True	AATAAA	-22	NA	81752681	81745729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_81750472_81751589_81752179_81752430
transcript_82168.known	chr6	-	5537	3	FSM	ENSG00000112773.16	ENST00000369756.3	5537	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	449	False	NA	-1	True	AATAAA	-22	NA	81752774	81745729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_81750472_81751589_81752179_81752568
transcript_8217.known	chr1	+	1891	15	FSM	ENSG00000158864.13	ENST00000678507.1	1891	15	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	345.850592963293	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	-2	True	NA	9	True	AATAAA	-16	NA	161197415	161214381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161197488_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_82170.known	chr6	-	6040	29	FSM	ENSG00000005700.15	ENST00000306270.12	6040	29	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_23	21.51743479135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	-6	True	NA	-8	True	AGTAAA	-18	NA	82247744	82169986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_82174.nic	chr6	-	2801	13	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-23	21439	-23	-21439	5prime_fragment	FALSE	canonical	3	69	junction_7	14.0554457615387	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAATTAATGTTATTG	NA	False	NA	NA	False	NA	NA	NA	82247777	82212769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_82176.nic	chr6	-	2694	12	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-23	22979	-23	-22979	5prime_fragment	FALSE	canonical	3	69	junction_6	14.3831857756844	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAATATTAGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	82247777	82214309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_82178.nnic	chr6	-	2012	11	NIC	ENSG00000005700.15	novel	4437	24	NA	NA	-19	-22979	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	28.4128492059491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAATATTAGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	82247773	82214309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82247561
transcript_82183.nic	chr6	-	1933	11	NIC	ENSG00000118420.17	novel	1352	11	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	43.9631664009771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATGTTTCTTTTGTTA	-25	True	NA	-5	True	ATTAAA	-21	NA	83065833	82892466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83063152_83063246_83065641
transcript_82184.nnic	chr6	-	1976	11	NNC	ENSG00000118420.17	novel	1352	11	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	44.0963717328308	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAATCTGCATGTTTCTT	NA	False	NA	-11	True	ATTAAA	-15	NA	83065857	82892472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_82893043_82895185_82895304_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_82185.known	chr6	-	1925	10	FSM	ENSG00000118420.17	ENST00000369747.8	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	13.0563829525052	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTCTATTCTTTG	-33	True	NA	-17	True	AATAAA	-24	NA	83065841	82892389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_82193.known	chr6	-	2013	14	FSM	ENSG00000013375.16	ENST00000512866.5	2013	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	116.199125153292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATTTTCTCTATTCTA	19	True	NA	-5	True	AATAAA	-19	NA	83193231	83166129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83166467_83169241_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_82197.known	chr6	-	6079	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_7	30.6508111185042	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCCTTTGACTTCA	-15	True	NA	3	True	AATAAA	-21	NA	83193265	83164872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_82202.known	chr6	-	1952	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	119.298179179548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTTCCGTTTA	-18	True	NA	2	True	ATTAAA	-22	NA	83193268	83169520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_82203.known	chr6	-	1866	12	FSM	ENSG00000013375.16	ENST00000651425.1	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	123.583477993856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATCTTTGCCATCACC	695	False	NA	-5	True	ATTAAA	-19	NA	83193288	83168902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83193178
transcript_82204.known	chr6	-	2996	12	FSM	ENSG00000013375.16	ENST00000650640.1	2996	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	132.716002012126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAACTTTGGCAATTG	-11	True	NA	NA	False	ATTAAA	-3	NA	83193261	83167793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_82206.known	chr6	-	1893	12	FSM	ENSG00000013375.16	ENST00000650642.1	1893	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	125.272991159506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATCTTATTACCAAC	-7	True	NA	-30	True	NA	NA	NA	83193257	83168927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_82213.known	chr6	-	561	5	FSM	ENSG00000013375.16	ENST00000505470.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	193.281368734806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACATGGTGTATTGTCG	-5	True	NA	NA	False	NA	NA	NA	83193255	83182949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83182979_83187007_83187076_83188613_83188795_83190808_83191015_83193178
transcript_82217.known	chr6	+	3769	3	FSM	ENSG00000013392.8	ENST00000369724.5	3769	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTTTTCATTCC	-12	True	NA	NA	False	AGTAAA	-20	NA	83193356	83198935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83193444_83194311_83194653_83195594
transcript_8222.known	chr1	+	2319	14	FSM	ENSG00000158864.13	ENST00000496553.6	2319	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	357.625171532443	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	2376	False	NA	9	True	AATAAA	-16	NA	161201680	161214381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161203402_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_82222.known	chr6	-	3338	14	FSM	ENSG00000065833.9	ENST00000369705.4	3338	14	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	8.08461172509615	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCTTAAAATGTTACA	10	True	NA	-9	True	AATAAA	-18	NA	83431051	83210401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_83212095_83216497_83216597_83223759_83223934_83227334_83227478_83228825_83228932_83237716_83237831_83239538_83239637_83253628_83253739_83315309_83315414_83346172_83346335_83352063_83352140_83398366_83398517_83407767_83407902_83430876
transcript_82223.known	chr6	+	2444	2	FSM	ENSG00000146250.7	ENST00000369700.4	2444	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTCTGGTTATTTTCC	9	True	NA	10	True	AATAAA	-22	NA	83512533	83525704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83512695_83523421
transcript_82224.known	chr6	+	521	3	FSM	ENSG00000203877.9	ENST00000369687.2	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	-15	True	NA	NA	False	AATAAA	-17	NA	83853591	83857515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83853774_83854096_83854162_83857241
transcript_82225.known	chr6	+	664	4	FSM	ENSG00000203877.9	ENST00000369689.6	570	4	-94	0	-94	0	multi-exon	FALSE	canonical	2	4	junction_1	5.55777733351102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	36	False	NA	NA	False	AATAAA	-17	NA	83853265	83857515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83853512_83853694_83853774_83854096_83854162_83857241
transcript_8223.known	chr1	+	1508	13	FSM	ENSG00000158864.13	ENST00000677948.1	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	469.236791680562	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	-2	True	NA	9	True	AATAAA	-16	NA	161202364	161214381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209842_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_82231.known	chr6	+	9205	16	FSM	ENSG00000065615.14	ENST00000369681.10	9205	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_12	16.7052885837589	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTCTGTATTTT	5	True	NA	12	True	AATAAA	-15	NA	83859688	83967423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514_83940602_83955297_83955463_83959823
transcript_82239.nic	chr6	+	2559	14	ISM	ENSG00000065615.14	ENST00000369681.10	9205	16	-40	25743	-7	-13695	5prime_fragment	FALSE	canonical	3	102	junction_12	14.7491851143872	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGACACCTGAATTTATT	-35	True	NA	NA	False	AATAAA	-17	NA	83859648	83941680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514
transcript_82241.known	chr6	+	2137	4	FSM	ENSG00000135324.6	ENST00000257776.5	2137	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	5.90668171555645	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	24	True	NA	15	True	AATAAA	-15	NA	84033771	84090881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_84033884_84055311_84055446_84062892_84062993_84089090
transcript_82244.known	chr6	-	5155	27	FSM	ENSG00000135315.12	ENST00000403245.8	5155	27	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	15.7924781736086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTATATAATGATTT	-15	True	NA	-12	True	AATAAA	-17	NA	84227643	84124249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_84125277_84126377_84126513_84146686_84146786_84149561_84149704_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169434_84171605_84171719_84174047_84174189_84174726_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_8225.known	chr1	-	421	4	FSM	ENSG00000158874.11	ENST00000468465.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	870.528702698666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161222523_161222917_161222995_161223349_161223426_161223594
transcript_82252.nic	chr6	-	2100	15	ISM	ENSG00000135315.12	ENST00000403245.8	5155	27	-31	50556	-31	-34	5prime_fragment	FALSE	canonical	3	34	junction_2	6.6332495807108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTTGGAAGAACTAAAGA	NA	False	NA	NA	False	ATTAAA	-36	NA	84227674	84174805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_82253.known	chr6	-	2072	15	FSM	ENSG00000135315.12	ENST00000497936.5	2072	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.9331089117215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCTTCAAATTGAATCA	20	True	NA	NA	False	ACTAAA	-17	NA	84227608	84174771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_84174955_84175209_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_82254.known	chr6	-	3427	29	FSM	ENSG00000135317.14	ENST00000684118.1	3427	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	67.7201907461421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	8165	False	NA	NA	False	TATAAA	-1	NA	85593901	85505527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507257_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_82255.known	chr6	-	3412	29	FSM	ENSG00000135317.14	ENST00000684581.1	3412	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	69.0137796799616	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	1	True	NA	NA	False	TATAAA	-1	NA	85593857	85505527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517872_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_82258.known	chr6	-	3111	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	39.8304362119475	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGTCTCATAGTCT	8	True	NA	-19	True	AATAAA	-27	NA	85593850	85505801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_8226.known	chr1	-	530	4	FSM	ENSG00000158874.11	ENST00000464492.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	1030.42590978467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGCTGAATGAA	11	False	NA	-38	True	NA	NA	NA	161223615	161222315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223501
transcript_82260.known	chr6	-	3856	27	FSM	ENSG00000135317.14	ENST00000683458.1	3856	27	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_17	70.0203689722206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-39	True	NA	NA	False	NA	NA	NA	85593897	85504994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547115_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_82263.known	chr6	-	3348	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_22	54.4621116006348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	8153	False	NA	NA	False	AATAAA	-29	NA	85593913	85505495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_82269.known	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	386.788707348381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	6	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_8227.known	chr1	-	265	4	FSM	ENSG00000158874.11	ENST00000469730.2	265	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	1033.24935142599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAGGAGCAGCTGACAC	67	False	NA	NA	False	ATTAAA	-39	NA	161223559	161222507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223518
transcript_82270.known	chr6	-	1804	12	FSM	ENSG00000135316.19	ENST00000444272.2	1804	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	346.970096598949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAAATCAAGCAACCT	2035	False	NA	NA	False	NA	NA	NA	85642042	85612831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85641989
transcript_82272.known	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_10	309.576161872971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	1155	False	NA	-1	True	AATAAA	-21	NA	85642922	85607778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_8228.known	chr1	-	474	4	FSM	ENSG00000158874.11	ENST00000367990.7	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	1512	junction_3	337.471315653477	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-2	True	NA	-14	True	AATAAA	-16	NA	161223628	161222291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223594
transcript_82281.known	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	299.907652453218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-21	True	NA	54	True	AATAAA	-28	NA	85643867	85614205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_82283.known	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	300.956417828394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	1066	False	NA	-16	True	AATAAA	-17	NA	85643011	85613384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_82284.known	chr6	-	2421	10	FSM	ENSG00000135316.19	ENST00000677514.1	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	429.089245084182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-16	True	NA	54	True	AATAAA	-28	NA	85642969	85614205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637268_85637357_85640220_85640329_85640445_85640565_85642796
transcript_82289.nic	chr6	-	1604	9	ISM	ENSG00000135316.19	ENST00000678899.1	3310	10	-305	5481	-305	-4138	5prime_fragment	FALSE	canonical	3	216	junction_8	314.276848495081	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAAGAAAGAAAAG	-7	True	NA	2	True	NA	NA	NA	85643316	85618865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_8229.known	chr1	-	401	3	FSM	ENSG00000158874.11	ENST00000463812.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1045	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161222523_161222917_161223051_161223594
transcript_82291.known	chr6	-	2754	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_10	100.097152806661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTGGTAAGTATTT	7	True	NA	NA	False	AATAAA	-20	NA	85642886	85613975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_82293.known	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	1548.39767501763	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
transcript_82295.known	chr6	-	2052	5	FSM	ENSG00000203875.13	ENST00000661011.1	2052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1731.77529936767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTATGCAGATATAAAT	509	False	NA	-58	True	NA	NA	NA	85678748	85664937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85666148_85677423_85677493_85677794_85677876_85677953_85678033_85678135
transcript_82296.known	chr6	-	451	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1517.40823775278	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
transcript_82297.known	chr6	-	279	4	FSM	ENSG00000203875.13	ENST00000660949.1	279	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	1518.52040559955	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATGTTCCTTTTTGT	509	False	NA	-19	True	AATAAA	-12	NA	85678748	85677085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678697
transcript_82298.known	chr6	-	553	5	FSM	ENSG00000203875.13	ENST00000667545.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	640.332921221453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678189_85678693
transcript_82299.known	chr6	-	866	4	FSM	ENSG00000203875.13	ENST00000428833.6	866	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2014.57296274477	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	509	False	NA	-18	True	AATAAA	-13	NA	85678748	85677084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677186_85677419_85677493_85677953_85678033_85678135
transcript_82300.known	chr6	-	1008	4	FSM	ENSG00000203875.13	ENST00000670327.1	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1835.85021175476	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTTTGGATTATGT	-6	True	NA	13	True	AATAAA	-2	NA	85678736	85677095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677790_85678033_85678135
transcript_82301.known	chr6	-	1258	4	FSM	ENSG00000203875.13	ENST00000657398.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	437.256090739613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTTTGTTATTACTT	509	False	NA	-11	True	AATAAA	-20	NA	85678748	85677077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135
transcript_82302.known	chr6	-	823	4	FSM	ENSG00000203875.13	ENST00000427501.6	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	1812.04788997299	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85678033_85678135_85678189_85678697
transcript_82303.known	chr6	-	750	5	FSM	ENSG00000203875.13	ENST00000668512.1	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	785.630121303912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTTTTTGTTATTA	509	False	NA	-14	True	AATAAA	-17	NA	85678748	85677080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135_85678189_85678693
transcript_82304.known	chr6	-	1187	4	FSM	ENSG00000203875.13	ENST00000661360.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	3744	junction_2	273.910366523228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135
transcript_82305.known	chr6	-	1265	3	FSM	ENSG00000203875.13	ENST00000660580.1	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	3793	junction_1	277.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677493_85677794_85678033_85678135
transcript_82306.known	chr6	-	772	7	FSM	ENSG00000203875.13	ENST00000671650.1	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1449.97674310851	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACAGGGTCAACTGTACA	509	False	NA	-50	True	NA	NA	NA	85678748	85665811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85666148_85677092_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
transcript_82307.known	chr6	-	456	6	FSM	ENSG00000203875.13	ENST00000623001.4	456	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1532.99140245469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	-6	True	NA	-18	True	AATAAA	-13	NA	85678736	85677084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_85677192_85677423_85677493_85677794_85677900_85677953_85678033_85678135_85678189_85678693
transcript_82309.nnic	chr6	+	1874	5	Antisense	novelGene_ENSG00000218561.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.23606797749979	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTACAAGAAAAAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	86601167	86730885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_+_86601936_86724417_86724486_86724812_86724981_86726436_86726535_86730113
transcript_82313.known	chr6	+	12341	8	FSM	ENSG00000188994.13	ENST00000369577.8	12341	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	18.1186565254081	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCCTTTAAACATTC	-4	True	NA	25	True	ATTAAA	-33	NA	87155564	87265943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502_87245645_87254649
transcript_82316.known	chr6	+	1732	5	FSM	ENSG00000188994.13	ENST00000369578.6	1732	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	44.6878059430087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATGTCTCCAAGTCTAA	-4	True	NA	NA	False	ATTAAA	-17	NA	87155564	87223936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87222769
transcript_82317.nic	chr6	+	1819	5	ISM	ENSG00000188994.13	ENST00000369577.8	12341	8	-5	31370	-5	-8994	5prime_fragment	FALSE	canonical	3	85	junction_4	10.816653826392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAACCTA	-9	True	NA	NA	False	NA	NA	NA	87155559	87234573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324
transcript_82319.nic	chr6	+	599	4	ISM	ENSG00000188994.13	ENST00000369578.6	1732	5	-5	5176	-5	-4107	5prime_fragment	FALSE	canonical	3	103	junction_3	5.24933858267454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAATTAGACTAGAAAAA	-9	True	NA	NA	False	GATAAA	-31	NA	87155559	87218760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595
transcript_8232.known	chr1	-	927	2	FSM	ENSG00000158874.11	ENST00000481413.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	3	2141	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	13	False	NA	-14	True	AATAAA	-16	NA	161223613	161222291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_161222523_161222917
transcript_82327.known	chr6	+	2405	3	FSM	ENSG00000111850.11	ENST00000229570.9	2405	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	9.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGATTCTGAACATT	-8	True	NA	10	True	AATAAA	-15	NA	87322592	87342322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87322633_87337008_87337167_87340115
transcript_8233.known	chr1	+	2790	10	FSM	ENSG00000158882.15	ENST00000367988.8	2790	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.43332678968494	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATGTTTCACCAACCC	0	True	NA	12	True	AGTAAA	-17	NA	161226059	161230746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_82335.known	chr6	-	2279	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	0	True	NA	NA	False	AATAAA	-21	NA	87329278	87282979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_87284940_87322865_87323044_87329137
transcript_82340.nnic	chr6	+	1652	8	NNC	ENSG00000164414.19	novel	1854	8	NA	NA	0	-66	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	24.5223762872914	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGTGAAATTTCAGTG	-10	True	NA	NA	False	AATAAA	-26	NA	87472973	87512264	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508467_87509040_87509176_87511398
transcript_82341.nnic	chr6	+	1724	8	NNC	ENSG00000164414.19	novel	1854	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	24.5223762872914	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	-10	True	NA	NA	False	AATAAA	-17	NA	87472973	87512336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508467_87509040_87509176_87511398
transcript_82342.known	chr6	+	1854	8	FSM	ENSG00000164414.19	ENST00000369552.9	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.1024909872717	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	-10	True	NA	NA	False	AATAAA	-17	NA	87472973	87512336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
transcript_82345.known	chr6	+	1720	7	FSM	ENSG00000164414.19	ENST00000369556.7	1720	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.7307360599543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAATTGTTTAATCA	NA	False	NA	NA	False	AATAAA	-11	NA	87472924	87512330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87509040_87509176_87511398
transcript_8236.known	chr1	+	2807	9	FSM	ENSG00000158882.15	ENST00000545897.5	2807	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.0792526117647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAATGTTTCACCAAC	2572	False	NA	10	True	AGTAAA	-15	NA	161225938	161230744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_82363.nnic	chr6	-	2009	20	ISM	ENSG00000146282.19	ENST00000693431.1	2361	21	10	461	4	4	5prime_fragment	FALSE	canonical	3	257	junction_19	117.637642608345	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	NA	False	NA	-47	True	AATGAA	-41	NA	87590002	87514406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_82364.known	chr6	-	2242	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	0	0	0	multi-exon	TRUE	canonical	3	480	junction_19	80.3308946270297	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-8	True	NA	-13	True	AATAAA	-14	NA	87589987	87513937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_82369.nnic	chr6	-	1953	19	FSM	ENSG00000146282.19	ENST00000693327.1	2388	19	-15	450	4	4	multi-exon	FALSE	canonical	3	51	junction_14	187.682890226975	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	NA	False	NA	-47	True	AATGAA	-41	NA	87590002	87514406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_8237.known	chr1	+	2396	7	FSM	ENSG00000158882.15	ENST00000474486.5	2396	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	18.2665450117603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCAGTATCCAAATAC	0	True	NA	43	True	AATAAA	-26	NA	161226059	161230615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161226137_161226354_161226605_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_8239.known	chr1	+	2636	9	FSM	ENSG00000158882.15	ENST00000367987.1	2636	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	7.74596669241483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGTATCCAAATACAGC	244	False	NA	46	True	AATAAA	-29	NA	161226303	161230618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_82391.nnic	chr6	+	2585	21	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	207.619363258825	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-8	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_8240.known	chr1	+	1406	3	FSM	ENSG00000248485.2	ENST00000504449.2	1406	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTTTTTCTTGGGA	1	True	NA	11	True	AATAAA	-32	NA	161258744	161285450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161258984_161283667_161283723_161284338
transcript_82400.known	chr6	+	2501	20	FSM	ENSG00000135336.16	ENST00000257789.4	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_14	144.243599741833	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-8	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_82401.known	chr6	+	2498	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_14	132.734337803497	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-8	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_82411.nnic	chr6	+	2394	19	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_8	193.471215200378	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-18	True	NA	16	True	AATAAA	-23	NA	87590124	87667451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_8242.known	chr1	+	1308	6	FSM	ENSG00000143252.16	ENST00000367975.7	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	75.8171484560057	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAGAGAAACCAAGAAAAT	-1	True	NA	12	True	ATTAAA	-31	NA	161314380	161363206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161356676_161356841_161362328
transcript_82421.known	chr6	+	471	4	FSM	ENSG00000135336.16	ENST00000468486.2	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	438.877608856451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	-13	True	NA	21	True	AATAAA	-17	NA	87590129	87595437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_87590193_87594352_87594408_87594526_87594614_87595171
transcript_82425.known	chr6	-	4825	16	FSM	ENSG00000111880.16	ENST00000369485.9	4825	16	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_4	23.8523234367919	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTCGTGAACTACCAAA	-13	True	NA	NA	False	AATAAA	-14	NA	88963618	88609896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_82428.known	chr6	-	1725	15	FSM	ENSG00000111880.16	ENST00000369475.7	1725	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.6684280599498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCTGTGACTTGAGG	196	False	NA	NA	False	NA	NA	NA	88963409	88612718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_82431.known	chr6	-	2017	14	FSM	ENSG00000111880.16	ENST00000627296.1	2017	14	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	25.2977534844687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGAAT	44	False	NA	NA	False	NA	NA	NA	88963561	88677993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_82433.nnic	chr6	+	1630	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-24	-322	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	-3	True	NA	20	True	TTTAAA	-31	NA	89081811	89084838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_89082166_89082545_89082736_89083752
transcript_82434.known	chr6	+	1345	2	FSM	ENSG00000146278.11	ENST00000354922.3	1345	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGATTTCAGTATGTGT	21	True	NA	NA	False	NA	NA	NA	89081835	89084197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89082736_89083752
transcript_82436.known	chr6	-	3589	5	FSM	ENSG00000154548.9	ENST00000452027.3	3589	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	65.3490627323759	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGTGATCAGTTCTT	-28	True	NA	-9	True	AATAAA	-19	NA	89118071	89095958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89098948_89105118_89105261_89105426_89105531_89107153_89107259_89117822
transcript_8244.known	chr1	+	1127	5	FSM	ENSG00000143252.16	ENST00000342751.8	1127	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	342.801691944483	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTCTCCTTGAAATCT	-1	True	NA	-5	True	ATTAAA	-14	NA	161314380	161363189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161362328
transcript_82440.known	chr6	-	4164	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	27.1263107460981	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTTTGACCAAAGGT	2	True	NA	-4	True	AATAAA	-20	NA	89352722	89326624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
transcript_82443.known	chr6	-	4923	7	FSM	ENSG00000025039.15	ENST00000369415.9	4923	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	16.6499916583229	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTACATCTCCACAT	-11	True	NA	19	True	GATAAA	-39	NA	89412273	89364615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411845
transcript_82444.known	chr6	+	5368	16	FSM	ENSG00000135299.17	ENST00000339746.9	5368	16	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	23.2134060883409	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTGTGAATACTTTGT	8	True	NA	21	True	ATTAAA	-35	NA	89433151	89633821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629239_89630432
transcript_82446.known	chr6	-	2835	3	FSM	ENSG00000083099.11	ENST00000517396.5	2835	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAAAAGTGCC	342	False	NA	NA	False	NA	NA	NA	89638401	89634806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637724_89637883_89638271
transcript_82447.known	chr6	-	677	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGAGTTCAAGACCAG	-6	True	NA	NA	False	NA	NA	NA	89638749	89636912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637724_89637883_89638671
transcript_82449.known	chr6	-	721	3	FSM	ENSG00000083099.11	ENST00000524153.5	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	110	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAATTAGCTTGGTG	-11	True	NA	NA	False	ACTAAA	-2	NA	89638486	89636856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637741_89637883_89638403
transcript_8245.known	chr1	+	460	5	FSM	ENSG00000143252.16	ENST00000432287.6	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	352.81333591575	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATTATTACATTCACC	0	True	NA	NA	False	AAGAAA	-24	NA	161314381	161362461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161356676_161356841_161362328
transcript_82450.known	chr6	-	5347	3	FSM	ENSG00000083099.11	ENST00000523377.2	5347	3	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	28	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGCATTTTATTACAA	-4	True	NA	2	True	AATAAA	-23	NA	89638747	89632223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637741_89637883_89638671
transcript_82452.known	chr6	-	608	3	FSM	ENSG00000083099.11	ENST00000523075.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTAACAAATGGCCAGTA	311	False	NA	17	True	AAGAAA	-5	NA	89638432	89637047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637741_89637883_89638271
transcript_82455.known	chr6	-	565	3	FSM	ENSG00000083099.11	ENST00000521961.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGGACACAATCATTAG	-8	True	NA	38	True	AAGAAA	-26	NA	89638483	89637026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89637354_89637724_89637883_89638403
transcript_82458.nic	chr6	-	1562	2	ISM	ENSG00000083099.11	ENST00000520441.5	791	3	-299	15304	-284	174	5prime_fragment	FALSE	canonical	3	312	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCCTGAGATTCACAT	NA	False	NA	NA	False	NA	NA	NA	89639033	89636682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_89637883_89638671
transcript_82459.nnic	chr6	-	2264	11	NNC	ENSG00000112159.12	novel	18485	102	NA	NA	-9824	-31593	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	12.3515181253156	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAC	-3	True	NA	NA	False	ACTAAA	-13	NA	89829618	89780815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89827927_89828022_89829572
transcript_82462.known	chr6	-	18485	102	FSM	ENSG00000112159.12	ENST00000369393.8	18485	102	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_96	128.029459101428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCATCCCACTCAC	-40	True	NA	-9	True	TATAAA	-24	NA	89819794	89642497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_89644194_89645014_89645158_89646539_89646604_89648031_89648147_89648255_89648330_89650023_89650199_89650731_89650848_89652191_89652282_89652991_89653156_89654163_89654335_89655763_89655969_89656699_89656802_89658208_89658371_89658609_89658918_89661430_89661579_89662086_89662240_89662791_89662968_89664486_89664629_89668013_89668152_89670918_89671081_89672199_89672364_89672546_89672703_89673235_89673463_89674103_89674590_89675463_89675580_89676101_89676208_89677569_89677697_89678598_89678746_89680588_89680752_89683131_89683331_89683830_89683905_89684875_89684986_89685826_89685974_89686901_89687024_89687343_89687439_89688077_89688174_89688572_89688809_89689869_89690144_89690672_89690835_89692442_89693149_89694073_89694184_89695604_89695993_89696359_89696575_89698864_89699036_89699600_89699728_89700062_89700295_89700645_89700857_89701557_89701679_89701903_89702062_89706058_89706193_89707360_89707477_89708495_89708629_89710680_89710795_89712035_89712257_89712574_89712787_89713147_89713297_89714542_89714752_89715652_89715770_89716649_89716810_89718365_89718628_89718766_89719031_89719135_89719226_89722954_89723144_89723511_89723620_89725198_89725397_89727832_89727956_89728930_89729140_89730725_89730924_89732556_89732776_89738325_89738456_89740233_89740379_89743149_89743281_89743575_89743715_89745272_89745412_89745491_89745627_89747328_89747471_89749222_89749370_89749542_89749752_89750353_89750533_89751430_89751583_89753511_89753623_89754082_89754231_89756276_89756391_89758254_89758352_89758815_89758961_89761644_89761749_89762318_89762531_89771560_89771622_89772572_89772722_89774620_89774734_89776599_89776696_89780211_89780294_89781398_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_82463.nic	chr6	+	1403	8	NIC	ENSG00000118412.13	novel	6719	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_6	53.014052815441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATTCGAATGTTTCTT	-14	True	NA	19	True	AATAAA	-22	NA	89829878	89874436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89871288_89871389_89873805
transcript_82464.known	chr6	+	1300	8	FSM	ENSG00000118412.13	ENST00000548224.2	1300	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	48.6792919976016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATTCGAATGTTTC	1	True	NA	17	True	AATAAA	-20	NA	89829940	89874434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89871288_89871389_89873805
transcript_82466.known	chr6	+	1153	7	FSM	ENSG00000118412.13	ENST00000552401.5	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	37.1816113451559	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	1	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89829935_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_82469.nic	chr6	+	1340	7	ISM	ENSG00000118412.13	ENST00000551025.4	6088	9	-60	8595	-15	0	5prime_fragment	FALSE	canonical	3	20	junction_1	39.5263625107767	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	-14	True	NA	NA	False	TATAAA	-24	NA	89829878	89862793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_82470.nic	chr6	+	1696	7	ISM	ENSG00000118412.13	ENST00000551025.4	6088	9	-60	8239	-15	356	5prime_fragment	FALSE	canonical	3	20	junction_1	39.5263625107767	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAATAGGCATATTAG	-14	True	NA	50	True	AAGAAA	-6	NA	89829878	89863149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_82472.known	chr6	+	1280	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	27.9702222610642	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	7	True	NA	NA	False	TATAAA	-24	NA	89829899	89862793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_82477.nnic	chr6	+	1203	6	NIC	ENSG00000118412.13	novel	1280	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	47.2888993316613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	1	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_89830068_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_82478.nnic	chr6	+	1559	6	NIC	ENSG00000118412.13	novel	1280	7	NA	NA	0	356	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	47.2888993316613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAATAGGCATATTAG	1	True	NA	50	True	AAGAAA	-6	NA	89829893	89863149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_89830068_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_8248.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000513009.5	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	315.105626029678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTTGTATTTTCAGAT	6	True	NA	NA	False	NA	NA	NA	161314387	161362540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161362328
transcript_82480.known	chr6	+	6719	10	FSM	ENSG00000118412.13	ENST00000237177.10	6719	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	42.5205832509386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATTCGAATGTTTCTT	-1	True	NA	19	True	AATAAA	-22	NA	89829938	89874436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288_89871389_89873805
transcript_82481.known	chr6	-	4932	17	FSM	ENSG00000135341.18	ENST00000369329.8	4932	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	123.824724913888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTACATAAAAGTGGTGA	-12	True	NA	-35	True	AATAAA	-21	NA	90587072	90513578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_82483.known	chr6	-	4830	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_1	32.7342158740497	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	15	True	NA	-29	True	AATAAA	-27	NA	90587045	90513572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_82487.known	chr6	-	1885	3	FSM	ENSG00000135333.15	ENST00000369297.1	1885	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTTTTTAACTT	8	True	NA	NA	False	AATAAA	-17	NA	93419547	93409653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_93411171_93414702_93414768_93419244
transcript_82489.nnic	chr6	-	1491	3	Antisense	novelGene_ENSG00000280451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	4	junction_1	21.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTCCTCTAAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	93835447	93778779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_93779848_93816887_93817014_93835150
transcript_82492.nnic	chr6	-	2131	3	Antisense	novelGene_ENSG00000219627.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACTTTAAAATACGCT	NA	False	NA	NA	False	AGTAAA	-11	NA	95517157	95483542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_95485549_95514090_95514145_95517086
transcript_82494.known	chr6	-	2268	1	FSM	ENSG00000261366.1	ENST00000564541.1	2268	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTGAGATAATCATTGT	-19	True	NA	-11	True	ATTAAA	-14	NA	95577450	95575182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_95575200_95577400
transcript_82495.known	chr6	+	4578	5	FSM	ENSG00000172469.17	ENST00000358812.9	4578	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	19.6643713349804	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATATTAAAGTCTAT	4	True	NA	14	True	AATAAA	-23	NA	95577534	95609452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_95577639_95586401_95586984_95596736_95596847_95604826_95604904_95605747
transcript_82497.nic	chr6	+	2926	4	ISM	ENSG00000172469.17	ENST00000474553.1	677	5	1202	-1713	1202	0	3prime_fragment	FALSE	canonical	2	4	junction_1	90.4077184512227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACAGTTAATGTTTATA	NA	False	NA	NA	False	AATAAA	-33	NA	95589423	95607736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_95590174_95596736_95596847_95604826_95604904_95605747
transcript_82498.known	chr6	+	1845	3	FSM	ENSG00000172469.17	ENST00000683172.1	1845	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAATTGAGAAAACA	22	True	NA	NA	False	ATTAAA	-4	NA	95577552	95597913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_95577639_95586401_95586984_95596736
transcript_825.known	chr1	-	1911	3	FSM	ENSG00000177000.13	ENST00000641437.1	1911	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGAGACCTGCCTGGCC	8	True	NA	NA	False	NA	NA	NA	11806006	11799856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11801400_11802880_11803130_11805887
transcript_8250.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000392169.6	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	417.591773013896	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	6	True	NA	NA	False	GGGGCT	-14	NA	161314387	161362433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161340593_161340656_161356676_161356841_161362328
transcript_82500.known	chr6	+	3399	2	FSM	ENSG00000172469.17	ENST00000369293.6	3399	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTATCCTCTTGTAT	-46	True	NA	NA	False	AGTAAA	-14	NA	95577484	95589646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_95577639_95586401
transcript_82502.known	chr6	+	4226	19	FSM	ENSG00000014123.10	ENST00000369278.5	4226	19	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_15	10.0623058987491	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTACTTTGAAGCT	-23	True	NA	72	True	AATAAA	-19	NA	96521805	96555276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893_96543017_96548163_96548282_96549411_96549579_96549668_96549800_96551432_96551514_96551837_96551924_96552481_96552663_96553284
transcript_82504.nic	chr6	+	1483	12	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-69	12316	-69	-12316	5prime_fragment	FALSE	canonical	3	81	junction_6	7.0170983619647	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGGAAGAAAAGATG	NA	False	NA	NA	False	ATTAAA	-9	NA	96521736	96542960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893
transcript_82506.nic	chr6	+	1381	11	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-69	14656	-69	-14656	5prime_fragment	FALSE	canonical	3	81	junction_6	7.06823881882892	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAAAGATGAGCGAA	NA	False	NA	NA	False	AGTAAA	-3	NA	96521736	96540620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534
transcript_82510.known	chr6	-	5967	2	FSM	ENSG00000112218.9	ENST00000229955.4	5967	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGAGTTTTTTTTAA	4	True	NA	-1	True	AATAAA	-18	NA	96837477	96794124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_96799882_96837267
transcript_82512.known	chr6	-	624	4	FSM	ENSG00000123545.6	ENST00000489477.1	624	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	461.036513376833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAATCTTCCCTCCTGAA	-19	True	NA	NA	False	NA	NA	NA	96897874	96891150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_96891392_96896083_96896154_96896743_96896848_96897665
transcript_82514.known	chr6	-	2407	3	FSM	ENSG00000123545.6	ENST00000316149.8	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_1	16	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAGTCCTATACTGCG	-36	True	NA	-3	True	AATAAA	-19	NA	96897891	96889314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_96891392_96896743_96896848_96897665
transcript_82516.known	chr6	-	8574	25	FSM	ENSG00000146263.12	ENST00000683635.1	8574	25	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	25.1368131432765	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	-24	True	NA	-7	True	AATAAA	-18	NA	97283216	97142160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_8252.known	chr1	+	571	7	FSM	ENSG00000143252.16	ENST00000504963.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	411.183961263082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTCCTACACATTATT	9	False	NA	NA	False	AAGAAA	-15	NA	161314390	161362452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161339561_161339589_161340593_161340656_161356676_161356841_161362328
transcript_82520.nic	chr6	-	2119	13	ISM	ENSG00000146263.12	ENST00000683635.1	8574	25	-25	88897	-24	-789	5prime_fragment	FALSE	canonical	3	23	junction_3	27.1241999369976	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCATTGTTTTCTCTGTCT	-49	True	NA	NA	False	AATAAA	-15	NA	97283241	97231057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_82527.nic	chr6	-	2171	10	NIC	ENSG00000146263.12	novel	5907	7	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_1	24.864074931962	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	-49	True	NA	-4	True	AATAAA	-15	NA	97283241	97258662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_97259670_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_82529.nnic	chr6	-	2442	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-24	-1238	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	22.261077142752	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATCAAAGGACTCAT	-49	True	NA	NA	False	AAAACA	-16	NA	97283241	97260900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_82531.nnic	chr6	-	1529	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-24	-2151	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	22.261077142752	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAAGGCATTGAATTCT	-49	True	NA	NA	False	AAAAAG	-9	NA	97283241	97261813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_82535.nnic	chr6	-	1519	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-24	-2151	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	28.7174399629335	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAAGGCATTGAATTCT	-49	True	NA	NA	False	AAAAAG	-9	NA	97283241	97261813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_97262179_97263334_97263449_97267881_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_82545.nic	chr6	-	1089	6	ISM	ENSG00000146263.12	ENST00000683635.1	8574	25	-25	130282	-24	-4539	5prime_fragment	FALSE	canonical	3	71	junction_2	10.9799817850486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAGTCATTGAATCAG	-49	True	NA	NA	False	AATAAA	-25	NA	97283241	97272442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_82547.nnic	chr6	-	1896	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGTTAATTAAAGTGAA	NA	False	NA	NA	False	AATAAA	-42	NA	97781306	97773939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_97775730_97781200
transcript_82550.nnic	chr6	-	2299	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCAATTGTTCAAAGAT	NA	False	NA	NA	False	AATAAA	-39	NA	97782509	97773958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_97775730_97781981
transcript_82553.known	chr6	-	8058	10	FSM	ENSG00000112234.9	ENST00000369244.7	8058	10	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_9	11.5833000265975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	10	True	NA	-11	True	AATAAA	-22	NA	98947946	98868534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98934761_98934880_98947805
transcript_82554.known	chr6	-	2810	9	FSM	ENSG00000112234.9	ENST00000229971.2	2810	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	12.3332629502496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTAGCGACACAGGAGG	NA	False	NA	NA	False	NA	NA	NA	98948006	98873724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
transcript_8256.known	chr1	+	1330	6	FSM	ENSG00000081721.12	ENST00000367943.5	1330	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	57.88471300784	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGTACAAAAATTTGA	-8	True	NA	121	True	NA	NA	NA	161749785	161757238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161750146_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_82564.known	chr6	-	11528	6	FSM	ENSG00000146267.12	ENST00000389677.6	11528	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.4705511657206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGTTTCTTGACTC	-3	True	NA	NA	False	AATACA	-14	NA	99349674	99271167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99349106
transcript_82565.nnic	chr6	-	1506	6	NIC	ENSG00000146267.12	novel	11528	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.1473915440764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	1	True	NA	-50	True	AATAAA	-14	NA	99350060	99280666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99350015
transcript_82567.nnic	chr6	-	1282	5	NIC	ENSG00000146267.12	novel	11528	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	32.2674371464484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	1	True	NA	-50	True	AATAAA	-14	NA	99350060	99280666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99281454_99291703_99291821_99333350_99333548_99342897_99343034_99350015
transcript_82570.nic	chr6	-	1398	8	NIC	ENSG00000132423.12	novel	1325	7	NA	NA	-21	-68	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	117.427007288853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTTTTGTTATTTCG	8542	False	NA	-13	True	AATAAA	-19	NA	99394216	99369471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383007_99383131_99383697_99383825_99394073
transcript_82571.known	chr6	-	1325	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	28.5292247820838	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTGATCTAGGAGTGTA	-7	True	NA	-7	True	AATAAA	-17	NA	99394195	99369400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
transcript_8258.nic	chr1	+	1283	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	10	-78	combination_of_known_junctions	FALSE	canonical	3	165	junction_1	80.4999378881748	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTCTGTGTTTCATA	-26	True	NA	43	True	ATTAAA	-15	NA	161749767	161757160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_82582.nnic	chr6	-	1118	6	NIC	ENSG00000132423.12	novel	1325	7	NA	NA	5	-68	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	107.059609564018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTTTTGTTATTTCG	2	True	NA	-13	True	AATAAA	-19	NA	99394186	99369471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99394073
transcript_82586.nnic	chr6	-	975	5	NIC	ENSG00000132423.12	novel	1325	7	NA	NA	-1	-68	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	121.649856144592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTTTTGTTATTTCG	-8	True	NA	-13	True	AATAAA	-19	NA	99394196	99369471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99394073
transcript_82588.known	chr6	-	5243	12	FSM	ENSG00000132424.17	ENST00000681615.1	5243	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_11	208.336385652571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATGATATTACAGTT	NA	False	NA	NA	False	AATACA	-2	NA	99425329	99397628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_82591.known	chr6	-	3142	11	FSM	ENSG00000132424.17	ENST00000438806.5	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_10	212.55985039513	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	NA	False	NA	-12	True	AATAAA	-25	NA	99425331	99399963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_826.known	chr1	-	855	3	FSM	ENSG00000175206.11	ENST00000376480.7	855	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCGTTGGTGTGCTTT	-2	True	NA	NA	False	AATAAA	-27	NA	11847783	11845708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11846015_11847112_11847440_11847561
transcript_8261.nnic	chr1	+	1179	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	-3	-78	combination_of_known_splicesites	FALSE	canonical	1	18	junction_1	137.899963741837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTCTGTGTTTCATA	8	True	NA	43	True	ATTAAA	-15	NA	161749801	161757160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_161750089_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_82615.known	chr6	+	2588	2	FSM	ENSG00000228506.3	ENST00000418945.3	2600	2	9	3	9	-3	multi-exon	FALSE	canonical	3	26	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGATGGTATTTTATT	11	True	NA	NA	False	AATAAA	-19	NA	99424921	99432323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_99425899_99430712
transcript_82616.known	chr6	-	2862	12	FSM	ENSG00000132424.17	ENST00000681611.1	2862	12	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	218.385170386242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-21	True	NA	-44	True	NA	NA	NA	99425315	99398988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_82617.known	chr6	-	2422	11	FSM	ENSG00000132424.17	ENST00000478777.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_2	87.9570349659423	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAACAAGG	-14	True	NA	NA	False	AAAAAG	-6	NA	99425308	99401460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99401631_99402539_99402711_99403828_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_82618.known	chr6	-	2850	3	FSM	ENSG00000132424.17	ENST00000466057.1	2850	3	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	89	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAACTTAGTCAGGCA	36	False	NA	NA	False	NA	NA	NA	99425258	99411790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99412740_99414571_99416429_99425214
transcript_82619.known	chr6	-	5878	18	FSM	ENSG00000123552.18	ENST00000500704.7	5878	18	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	39.4758916398508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGTGTATTAACAAAAAT	5	True	NA	-5	True	AATAAA	-14	NA	99515423	99432324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_82628.known	chr6	-	2186	13	FSM	ENSG00000112237.13	ENST00000520371.5	2186	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	488.304947980483	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGCACAATTTAAG	98	False	NA	-45	True	AATAAA	-16	NA	99568713	99542501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99544178_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_82630.known	chr6	-	2212	13	FSM	ENSG00000112237.13	ENST00000326298.8	2212	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	536.093249558528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	2	True	NA	-35	True	AATAAA	-20	NA	99568631	99542386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549311_99549400_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_82634.known	chr6	-	2153	12	FSM	ENSG00000112237.13	ENST00000520429.6	2153	12	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_7	104.526480491629	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	4	True	NA	-35	True	AATAAA	-20	NA	99568660	99542386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_82635.known	chr6	-	1035	12	FSM	ENSG00000112237.13	ENST00000523799.5	1035	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	414.062857048029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATATTGGAAAGTGATT	NA	False	NA	NA	False	AATGAA	-22	NA	99568825	99543447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568717
transcript_82639.known	chr6	-	1426	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	380.711838707744	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTCTTCTGGAT	2	True	NA	NA	False	AATAAA	-14	NA	99568662	99543779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_8264.known	chr1	+	740	5	FSM	ENSG00000081721.12	ENST00000464004.2	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	80.0468612751306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACCGTGAAGGAAGTGG	-14	True	NA	NA	False	NA	NA	NA	161749779	161753105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074
transcript_82641.known	chr6	-	958	11	FSM	ENSG00000112237.13	ENST00000523985.5	958	11	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_10	427.71117591197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGAATAGCTTGT	4	True	NA	NA	False	AATAAA	-40	NA	99568660	99543474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99568495
transcript_82654.known	chr6	-	1444	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	25.0199920063936	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	NA	False	NA	-5	True	AATAAA	-21	NA	99515489	99482261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_8266.known	chr1	+	2487	17	FSM	ENSG00000118217.7	ENST00000681492.1	2487	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	28.5667392915257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCCACCTCTCCTTTTT	-3	True	NA	5	True	TTTAAA	-20	NA	161766319	161958997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161870971_161871062_161912295_161912381_161958445
transcript_82662.known	chr6	+	5571	5	FSM	ENSG00000279170.3	ENST00000623858.2	5571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.3675402362457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCATAATATTGTCCA	-11	True	NA	NA	False	AGTAAA	-16	NA	99520975	99589899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631_99531791_99584879
transcript_82666.known	chr6	+	1873	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	4.02768199119819	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAAAT	-5	True	NA	NA	False	NA	NA	NA	99521048	99533185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
transcript_82670.known	chr6	-	8111	42	FSM	ENSG00000112249.14	ENST00000369162.7	8111	42	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_28	52.2208051696252	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGGGGAACCA	26	True	NA	NA	False	AATAAA	-18	NA	100881329	100508193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_100509534_100509931_100510108_100512708_100512919_100516179_100516328_100517990_100518143_100540162_100540388_100589633_100589769_100589947_100590060_100601809_100601936_100605567_100605701_100606739_100606861_100606950_100607089_100625191_100625335_100627589_100627711_100627841_100627988_100629014_100629182_100631127_100631214_100638600_100638822_100642580_100642750_100644030_100644130_100646614_100646770_100647225_100647452_100650537_100650715_100651559_100651647_100652724_100652890_100655698_100655819_100661805_100662031_100662344_100662537_100679617_100679753_100715461_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_82671.known	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	123.828734773297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-14	True	NA	-11	True	AATAAA	-20	NA	100881311	100856302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
transcript_82673.known	chr6	+	1517	1	FSM	ENSG00000260000.2	ENST00000565695.2	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACTTTATTTTTACTT	-10	True	NA	NA	False	AATAAA	-16	NA	100881470	100882987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_100881500_100883000
transcript_82675.known	chr6	+	2635	5	FSM	ENSG00000187772.8	ENST00000637759.1	2635	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	136.277290844807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACGAAAATGCCTCAG	142	False	NA	96	True	NA	NA	NA	104940865	105080479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_104941013_104950460_104950510_104958098_104958287_105026297_105026483_105078413
transcript_82678.known	chr6	+	5446	4	FSM	ENSG00000187772.8	ENST00000345080.5	5446	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	163.905121606644	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGGAGATTTT	0	True	NA	13	True	AATAAA	-21	NA	104957106	105083332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_104957261_104958098_104958287_105026297_105026483_105078413
transcript_8268.known	chr1	+	7470	16	FSM	ENSG00000118217.7	ENST00000367942.4	7470	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	8.4369557437634	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTTATTCTGTATGTA	-3	True	NA	26	True	AATAAA	-16	NA	161766319	161964070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_82680.nnic	chr6	+	1066	4	NNC	ENSG00000187772.8	novel	912	6	NA	NA	344	167	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	176.371451456546	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGACATAACAGGTC	283	False	NA	NA	False	AAAAAG	-20	NA	104957450	105078769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_104957788_104958098_104958287_105026297_105026483_105078413
transcript_82687.nnic	chr6	-	524	3	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	-70	-1799	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTACAGAGGCATATGGT	925	False	NA	-13	True	AATAAA	-23	NA	104940444	104926499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_104926883_104940177_104940214_104940339
transcript_82688.known	chr6	-	1029	4	FSM	ENSG00000132429.10	ENST00000474760.1	1029	4	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_2	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCGAGATGCCATTGC	-29	True	NA	-80	True	TATAAA	-8	NA	105179995	105158359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_105158752_105159710_105159820_105161795_105162161_105179832
transcript_82689.known	chr6	-	7250	15	FSM	ENSG00000085377.15	ENST00000652536.2	7250	15	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	27.0962946484103	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTTTCTGGATGAGTG	3	True	NA	NA	False	AATAAA	-16	NA	105403082	105273217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_105278439_105281745_105281903_105282450_105282583_105285485_105285581_105288757_105288895_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
transcript_82690.known	chr6	-	1888	9	FSM	ENSG00000057663.16	ENST00000646025.1	1888	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	157.789218579724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAATATGTTTTGTCATT	-11	True	NA	-47	True	AATAAA	-4	NA	106325791	106185941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106217463_106217602_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_82698.known	chr6	-	3092	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	129.233849107353	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	10	True	NA	NA	False	AATAAA	-1	NA	106325417	106184475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
transcript_82699.known	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	52.5869542291816	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	20	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_82702.known	chr6	-	3035	7	FSM	ENSG00000057663.16	ENST00000635758.2	3035	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	111.613917889601	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	42	True	NA	NA	False	AATAAA	-1	NA	106325738	106184475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106316100_106316267_106325525
transcript_8271.nic	chr1	+	1049	8	ISM	ENSG00000118217.7	ENST00000680462.1	2974	15	-35	46258	-12	27409	5prime_fragment	FALSE	canonical	3	65	junction_5	9.81044840765108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAGAATATATGC	-7	True	NA	NA	False	GATAAA	-31	NA	161766285	161819697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632
transcript_82711.known	chr6	-	2893	9	FSM	ENSG00000130347.13	ENST00000369063.8	2893	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	16.4544826719043	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATCTGAT	-11	True	NA	NA	False	NA	NA	NA	106629498	106570770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106628747
transcript_82712.nnic	chr6	-	1140	9	NNC	ENSG00000130347.13	novel	2893	9	NA	NA	-546	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	63.1783190659581	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACGTTCTTATTTGGT	452	False	NA	-15	True	AATAAA	-17	NA	106630044	106571974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106629842
transcript_8272.known	chr1	+	3032	16	FSM	ENSG00000118217.7	ENST00000681557.1	3032	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.1584195184484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	161766341	161959658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_161766443_161778243_161778317_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_82725.known	chr6	+	4106	11	FSM	ENSG00000130348.11	ENST00000369046.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	22.6294056484036	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGAACAGAGTGTTTT	3	True	NA	11	True	ATTAAA	-24	NA	106629577	106668417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466_106652583_106654729_106654923_106655614_106655733_106662979_106663186_106665781
transcript_82733.known	chr6	+	2158	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	24.0393196428037	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6	True	NA	NA	False	NA	NA	NA	106629613	106653823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
transcript_82739.known	chr6	-	2513	3	FSM	ENSG00000272398.6	ENST00000619133.4	2513	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	2724	14425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-6	True	NA	-21	True	AATAAA	-22	NA	106975465	106969830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106971835_106974577_106974755_106975133
transcript_8274.known	chr1	+	8524	8	FSM	ENSG00000152332.16	ENST00000489294.2	8524	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	6.65168384389875	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCTATACTTAGTATA	-20	True	NA	35	True	AATAAA	-36	NA	162497817	162529631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162498269_162499954_162500248_162500912_162501105_162503753_162503849_162512499_162512577_162512724_162512824_162518101_162518191_162522403
transcript_82741.known	chr6	-	586	2	FSM	ENSG00000272398.6	ENST00000620405.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGAACTCACTTTCCT	-2	True	NA	NA	False	NA	NA	NA	106974732	106971093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106971525_106974577
transcript_82742.known	chr6	-	825	2	FSM	ENSG00000272398.6	ENST00000622315.1	825	2	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTGGCTTGAGAAAT	1820	False	NA	-94	True	NA	NA	NA	106974039	106971379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_106971835_106973669
transcript_82746.nnic	chr6	+	1523	5	NNC	ENSG00000130349.10	novel	1146	5	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	95.0276275616728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	97	False	NA	9	True	AATAAA	-16	NA	107028319	107051336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_107028925_107030024_107030108_107039748_107040231_107044259_107044333_107051056
transcript_8275.known	chr1	+	2377	11	FSM	ENSG00000117143.13	ENST00000271469.7	2377	11	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_8	29.3216643456677	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGTACTTGAAGAAATTA	-18	True	NA	26	True	AATAAA	-26	NA	162561505	162599842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592731_162592783_162597791_162597859_162599270
transcript_82750.known	chr6	+	1146	5	FSM	ENSG00000130349.10	ENST00000625458.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	95.5955019862336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATCTGCCGAGCCAT	237	False	NA	8	True	AATAAA	-15	NA	107028568	107051335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_107028798_107030024_107030108_107039748_107040231_107044259_107044333_107051056
transcript_82753.known	chr6	+	1158	4	FSM	ENSG00000130349.10	ENST00000311381.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	31.689465477067	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTATTTAAAATGTT	-24	True	NA	NA	False	AATAAA	-18	NA	107028198	107051586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_107028272_107039748_107040231_107044259_107044333_107051056
transcript_82755.known	chr6	+	1420	4	FSM	ENSG00000130349.10	ENST00000405204.6	1420	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	88.1450824241237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	-10	True	NA	9	True	AATAAA	-16	NA	107028212	107051336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_107028798_107039748_107040231_107044259_107044333_107051056
transcript_8276.known	chr1	+	2294	10	FSM	ENSG00000117143.13	ENST00000367926.8	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	59.6280653118941	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTTGTACTTGAAGA	9	True	NA	21	True	AATAAA	-21	NA	162561532	162599837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162597791_162597859_162599270
transcript_82760.known	chr6	-	3536	8	FSM	ENSG00000164494.12	ENST00000369037.9	3536	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	10.5926428068095	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGGTTTGTTTTA	0	True	NA	-5	True	ATTAAA	-17	NA	107459564	107152561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
transcript_82761.nnic	chr6	-	3158	8	NNC	ENSG00000164494.12	novel	3536	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	22.9061973612169	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGGTTTGTTTTA	0	True	NA	-5	True	ATTAAA	-17	NA	107459564	107152561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107459367
transcript_82764.known	chr6	-	1236	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	20.9814733091416	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	0	True	NA	-2	True	AATAAA	-15	NA	107459564	107264185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
transcript_82766.known	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_10	44.163870980701	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-17	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_82774.nic	chr6	-	1823	16	ISM	ENSG00000025796.14	ENST00000369002.9	6430	21	-38	25814	-38	10	5prime_fragment	FALSE	canonical	3	420	junction_5	34.6072567855677	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACCTTTAAAAAAAAAAC	6034	False	NA	NA	False	AGTAAA	-33	NA	107958246	107893569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_82779.known	chr6	-	482	3	FSM	ENSG00000025796.14	ENST00000460009.1	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGTTATTGGTGCA	6238	False	NA	0	True	AATAAA	-28	NA	107958042	107954583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_107954767_107955964_107956107_107957885
transcript_8278.known	chr1	+	10086	18	FSM	ENSG00000162733.19	ENST00000367921.8	10086	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.32581501995113	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCTCTCTGAGCACC	-13	True	NA	NA	False	ATTAAA	-22	NA	162632463	162787405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162632632_162655210_162655375_162719036_162719146_162753094_162753198_162754623_162754856_162755155_162755304_162755663_162755770_162759795_162759980_162761210_162761455_162766000_162766064_162767228_162767360_162770301_162770513_162772023_162772248_162773468_162773597_162775651_162775844_162776135_162776371_162778579_162778730_162780111
transcript_82780.known	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	28.2658804922118	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-6	True	NA	46	True	ATTAAA	-20	NA	108074741	108041408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
transcript_82781.known	chr6	-	1535	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_1	81.8711725144381	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTCTCCTATTTTTC	-21	True	NA	-13	True	ATTAAA	-20	NA	108261040	108211221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
transcript_82782.known	chr6	-	890	4	FSM	ENSG00000112335.15	ENST00000349379.5	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	400.841614606069	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGTTGACAAGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	108261244	108212004	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260825
transcript_82783.known	chr6	+	5048	13	FSM	ENSG00000135537.17	ENST00000368977.9	5048	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	7.91447338038918	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGCTGGTAGGAAAG	-5	True	NA	NA	False	NA	NA	NA	108295053	108526001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108510211_108510353_108519696_108519811_108522296
transcript_82785.nic	chr6	+	1560	12	NIC	ENSG00000135537.17	novel	5048	13	NA	NA	-125	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	10.3348883571799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGGCAGAACTCCTTATT	-8	True	NA	13	True	AATAAA	-20	NA	108294865	108522466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108519696_108519811_108522296
transcript_82791.nnic	chr6	+	2218	3	NNC	ENSG00000286511.1	novel	2167	2	NA	NA	-18921	16	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGTTAAAAGGTCTCC	120	False	NA	10	True	AATAAA	-16	NA	108780007	108837129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_108780161_108782187_108782352_108835228
transcript_82793.nnic	chr6	+	1392	3	NNC	ENSG00000286511.1	novel	2167	2	NA	NA	-17240	-513	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	3	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATACTCAATATT	1603	False	NA	NA	False	NA	NA	NA	108781688	108836357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_108781788_108782187_108782352_108835228
transcript_82794.nnic	chr6	+	2164	3	NNC	ENSG00000286511.1	novel	2167	2	NA	NA	-17240	16	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	3	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGTTAAAAGGTCTCC	1603	False	NA	10	True	AATAAA	-16	NA	108781688	108837129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_108781788_108782187_108782352_108835228
transcript_82798.nic	chr6	+	1071	7	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-29	74657	-23	19563	5prime_fragment	FALSE	canonical	2	5	junction_5	12.9443252259651	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTTGTTTTTTTTTTA	-30	True	NA	NA	False	AAAACA	-20	NA	108848392	108899819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823_108868996_108876142_108876351_108894466_108894544_108899693
transcript_828.known	chr1	-	708	3	FSM	ENSG00000120937.9	ENST00000376468.4	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	8	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAAACTGATTTGTC	-1	True	NA	-13	True	AATAAA	-20	NA	11858945	11857463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11857672_11858213_11858470_11858701
transcript_82802.nic	chr6	+	1265	4	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-29	104876	-23	-6747	5prime_fragment	FALSE	canonical	3	28	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTTAATTTTATTAGAAA	-30	True	NA	13	True	AATAAA	-26	NA	108848392	108869600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823
transcript_82803.nnic	chr6	+	1279	4	NNC	ENSG00000118690.13	novel	3734	18	NA	NA	-23	-6747	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	11.5758369027902	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTTAATTTTATTAGAAA	-30	True	NA	13	True	AATAAA	-26	NA	108848392	108869600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_108848561_108854224_108854486_108858198_108858272_108868823
transcript_82809.nic	chr6	+	2254	12	NIC	ENSG00000183137.15	novel	2522	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.5719046306899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATTGATTGAAGCCC	-6	True	NA	NA	False	AATAAA	-18	NA	109095158	109163166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_109095576_109140420_109140676_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
transcript_82812.known	chr6	+	1680	11	FSM	ENSG00000183137.15	ENST00000368970.6	1680	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	33.6089273854433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATTGATTGAAGCCC	27	False	NA	NA	False	AATAAA	-18	NA	109095528	109163166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159217_109159463_109160571_109160717_109162748
transcript_82813.known	chr6	+	12903	11	FSM	ENSG00000183137.15	ENST00000517392.6	12903	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	25.4654668129214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTGTATATTTTGTT	5	True	NA	NA	False	CATAAA	-18	NA	109095506	109174418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
transcript_82820.nic	chr6	+	1622	10	ISM	ENSG00000183137.15	ENST00000368968.6	1649	11	-353	2398	4	0	5prime_fragment	FALSE	canonical	2	16	junction_1	26.6073414170591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	2	True	NA	13	True	AATAAA	-18	NA	109095166	109160765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_82821.known	chr6	+	1120	10	FSM	ENSG00000183137.15	ENST00000520610.5	1120	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	41.6015787924532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAATGGAAATTAAAGG	17	True	NA	-93	True	NA	NA	NA	109095518	109160659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109158599_109158719_109159024_109159103_109159268_109159463_109160571
transcript_82831.known	chr6	+	866	7	FSM	ENSG00000183137.15	ENST00000523209.5	866	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	39.2159264698526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAGAAGAAATCTTCA	24	False	NA	NA	False	AGTAAA	-38	NA	109095525	109155854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109140420_109140676_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_82832.known	chr6	+	908	7	FSM	ENSG00000183137.15	ENST00000519095.5	908	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	32.316146634977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATATAAAATAAAAGACA	10	True	NA	NA	False	AAAAAG	-7	NA	109095511	109155974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_82835.nic	chr6	+	1617	7	ISM	ENSG00000183137.15	ENST00000522490.5	861	9	-5	2511	0	4	5prime_fragment	FALSE	canonical	0	0	junction_2	44.6305824394987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCTGTATTTTTCATA	17	True	NA	26	True	AATAAA	-16	NA	109095518	109156797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_109095576_109106034_109106091_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_82839.known	chr6	+	1649	11	FSM	ENSG00000183137.15	ENST00000368968.6	1649	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	33.8586768790513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTTATTGATTGAAG	18	False	NA	NA	False	AATAAA	-15	NA	109095519	109163163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160731_109162748
transcript_82841.known	chr6	-	3020	6	FSM	ENSG00000135535.17	ENST00000310786.10	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_2	51.1570132044473	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	2	True	NA	-1	True	AATAAA	-22	NA	109382467	109366513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_82844.known	chr6	-	2936	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	342.741155976343	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	0	True	NA	-5	True	AATAAA	-18	NA	109382444	109366517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_82847.known	chr6	+	1684	10	FSM	ENSG00000135587.9	ENST00000258052.8	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	6.97791931915893	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	-2	True	NA	5	True	AATAAA	-14	NA	109440723	109443919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_82852.known	chr6	-	3430	25	FSM	ENSG00000135596.18	ENST00000358807.8	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_24	47.479801992239	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-28	True	NA	-4	True	ATTAAA	-17	NA	109455772	109444061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_82856.known	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	13.1328680120613	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	13	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
transcript_82858.known	chr6	-	2566	12	FSM	ENSG00000155085.16	ENST00000285397.9	2566	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.99276532375755	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTACTATAAACATTCTTG	NA	False	NA	NA	False	AATAAA	-32	NA	109691217	109631692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_109633104_109633183_109633324_109641517_109641617_109644613_109644689_109656755_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_82866.known	chr6	+	3025	23	FSM	ENSG00000112367.12	ENST00000230124.8	3025	23	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	21.2298032363596	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	5	True	NA	6	True	AATAAA	-14	NA	109691295	109825426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82868.known	chr6	+	2966	22	FSM	ENSG00000112367.12	ENST00000675726.1	2966	22	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_21	50.575643264421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATGACTAGATAAT	NA	False	NA	-13	True	NA	NA	NA	109691248	109825407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109825087
transcript_8287.known	chr1	+	1528	9	FSM	ENSG00000132196.16	ENST00000254521.8	1528	9	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_7	15.8464309861874	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTTCCTTTTGGAA	NA	False	NA	1	True	AATAAA	-19	NA	162790701	162812823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_162790836_162792658_162792863_162796584_162796678_162797801_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_82871.known	chr6	+	2915	22	FSM	ENSG00000112367.12	ENST00000676442.1	2915	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	50.1363220993602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTAGATAATTTGCTGT	-26	True	NA	-6	True	AATAAA	-2	NA	109691264	109825414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82872.known	chr6	+	2811	22	FSM	ENSG00000112367.12	ENST00000674649.1	2811	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	51.2522550800806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTCTGAAGCCTTTCT	21	True	NA	0	True	ATTAAA	-6	NA	109691311	109825352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82875.known	chr6	+	2501	20	FSM	ENSG00000112367.12	ENST00000675831.1	2501	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	54.2018388542313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGTCTCATCTTCAAA	22	True	NA	-40	True	NA	NA	NA	109691312	109825312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82876.known	chr6	+	2187	15	FSM	ENSG00000112367.12	ENST00000675681.1	2187	15	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	22.0546630730398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGAGTCATTTTTTTA	21	True	NA	NA	False	GATAAA	-11	NA	109691311	109767208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
transcript_82877.known	chr6	+	1387	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	22.2542130842679	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	5	True	NA	4	True	AATAAA	-20	NA	109691295	109743480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
transcript_82880.nic	chr6	+	870	7	ISM	ENSG00000112367.12	ENST00000454215.6	1129	9	4	4834	-3	-61	5prime_fragment	FALSE	canonical	3	193	junction_6	19.7884646532603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTTTGTATATTATTC	9	True	NA	6	True	ATTAAA	-18	NA	109691299	109738412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324
transcript_82881.known	chr6	+	1158	7	FSM	ENSG00000112367.12	ENST00000368941.2	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	82.2896307765039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	4	True	NA	4	True	AATAAA	-20	NA	109691294	109743480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109
transcript_82882.known	chr6	+	3033	23	FSM	ENSG00000112367.12	ENST00000675523.1	3033	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.9899520161725	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	-5	True	NA	6	True	AATAAA	-14	NA	109691285	109825426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715079_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82883.known	chr6	+	2725	20	FSM	ENSG00000112367.12	ENST00000675714.1	2725	20	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	21.9046030402067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATGGTGAATTTCTG	-3	True	NA	NA	False	AATAAA	-20	NA	109691287	109791772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375
transcript_82884.known	chr6	+	2786	21	FSM	ENSG00000112367.12	ENST00000674641.1	2786	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.8615881335398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGACTAGATAATTTG	5	True	NA	-10	True	NA	NA	NA	109691295	109825410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_109691502_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_82887.nnic	chr6	-	2560	9	NIC	ENSG00000112290.13	novel	2815	11	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_8	131.915455879893	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	-20	True	NA	-4	True	AATAAA	-19	NA	110179989	110099818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110179840
transcript_8289.nic	chr1	+	1502	9	NIC	ENSG00000132196.16	novel	2541	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_3	65.8567337103808	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTCTTTTCCTTCCTT	NA	False	NA	-5	True	AATAAA	-13	NA	162790695	162812817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_162790836_162792658_162792863_162796584_162796678_162797827_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_82895.known	chr6	+	3859	15	FSM	ENSG00000168438.15	ENST00000307731.2	3859	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	13.431610598335	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCTTGTTCATCTTT	-1	True	NA	29	True	AATAAA	-29	NA	110180426	110232232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_82896.known	chr6	+	3933	16	FSM	ENSG00000168438.15	ENST00000368932.5	3933	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.0407570136008	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAATGTTCATCTTG	0	True	NA	20	True	AATAAA	-20	NA	110180140	110232223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110180181_110180383_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_82899.known	chr6	+	6589	9	FSM	ENSG00000123505.19	ENST00000672937.2	6589	9	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_5	48.6383336474431	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTATGGTGGTATTG	1	True	NA	4	True	AATAAA	-14	NA	110874784	110898879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110887504_110887592_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_829.known	chr1	-	2819	3	FSM	ENSG00000116685.16	ENST00000376572.8	2819	3	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	51.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-12	True	NA	-7	True	AATAAA	-18	NA	11926427	11919590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_11920333_11922635_11923490_11925204
transcript_82906.known	chr6	+	1605	8	FSM	ENSG00000123505.19	ENST00000368877.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	268.664649475049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCGTCCTCATTAGGT	1	True	NA	NA	False	NA	NA	NA	110874784	110893982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_82909.known	chr6	+	3121	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	279.246414480115	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	453	False	NA	28	True	AATAAA	-29	NA	110874769	110895713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_82910.known	chr6	+	3059	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	338.764206344177	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	0	True	NA	23	True	AATAAA	-24	NA	110874783	110895708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_82912.known	chr6	+	788	6	FSM	ENSG00000155115.7	ENST00000329970.8	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	2181	junction_1	55.4595347979047	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTCTTTTAATATT	6	True	NA	26	True	CATAAA	-16	NA	110958705	110967872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110958827_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_82914.known	chr6	+	800	6	FSM	ENSG00000155115.7	ENST00000480191.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	894.700262657836	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCATTTTATTGGC	176	False	NA	44	True	CATAAA	-34	NA	110958927	110967890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110959043_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_82924.known	chr6	+	3671	10	FSM	ENSG00000197498.13	ENST00000441448.7	3671	10	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_7	40.8900966005218	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	-26	True	NA	21	True	AATAAA	-17	NA	110982037	111028263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_82928.nic	chr6	+	845	9	ISM	ENSG00000197498.13	ENST00000441448.7	3671	10	-35	3936	-12	0	5prime_fragment	FALSE	canonical	3	873	junction_7	41.3763217311544	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAACTTAGAGCTTGG	NA	False	NA	12	True	TATAAA	-31	NA	110982002	111024327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182
transcript_82930.known	chr6	+	3621	9	FSM	ENSG00000197498.13	ENST00000607388.1	3621	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	307.479267593768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	-14	True	NA	21	True	AATAAA	-17	NA	110982049	111028263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_110982130_110985005_110985139_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_82940.nnic	chr6	+	2293	4	NNC	ENSG00000231889.8	novel	1093	4	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	22.8958996814325	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTCTCTTTCCTATT	22	False	NA	7	True	AATAAA	-16	NA	111483513	111578177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_111483666_111570084_111570228_111574620_111574803_111576361
transcript_82943.known	chr6	+	609	4	FSM	ENSG00000231889.8	ENST00000525151.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.4558441227157	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	24	False	NA	NA	False	ATTAAA	-16	NA	111483515	111503608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111484117_111484146_111484743_111484862_111503295
transcript_82944.known	chr6	+	784	4	FSM	ENSG00000231889.8	ENST00000438298.7	1093	4	25	284	7	-12	multi-exon	FALSE	canonical	2	10	junction_2	19.0262975904404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTATTTCTTAAAAAAA	11	True	NA	NA	False	ACTAAA	-14	NA	111483561	111576741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111484743_111484862_111574620_111574803_111576361
transcript_82946.known	chr6	+	1106	3	FSM	ENSG00000231889.8	ENST00000449449.7	2171	3	45	1020	4	135	multi-exon	FALSE	canonical	3	46	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTCCAAGAAAAACTC	-10	True	NA	NA	False	NA	NA	NA	111483540	111577160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111574620_111574803_111576361
transcript_82949.nnic	chr6	+	485	3	NNC	ENSG00000231889.8	novel	915	3	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	152	False	NA	NA	False	ATTAAA	-16	NA	111483742	111503608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_111483797_111484743_111484862_111503295
transcript_82950.known	chr6	+	324	2	FSM	ENSG00000231889.8	ENST00000420651.3	442	2	21	97	3	-97	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTTATTTGCATA	7	True	NA	NA	False	NA	NA	NA	111483557	111503511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111503295
transcript_82951.known	chr6	+	576	2	FSM	ENSG00000231889.8	ENST00000532353.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTTTGACCTAGTAATT	4	True	NA	NA	False	TTTAAA	-7	NA	111483554	111598302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_111483666_111597837
transcript_82952.known	chr6	-	2785	10	FSM	ENSG00000056972.20	ENST00000340026.10	2785	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	25.4795972602239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-9	True	NA	-4	True	AATAAA	-19	NA	111606278	111558939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111601195_111601307_111605775
transcript_82954.known	chr6	-	2264	9	FSM	ENSG00000056972.20	ENST00000359831.8	2264	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.7194469312642	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	19	True	NA	-4	True	AATAAA	-19	NA	111605871	111558939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_111559552_111562964_111563040_111566443_111566558_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
transcript_82957.known	chr6	-	3234	14	FSM	ENSG00000010810.17	ENST00000368682.7	3234	14	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	94.5419352181502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	607	False	NA	2	True	ATTAAA	-23	NA	111873067	111660331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_82958.known	chr6	-	3628	14	FSM	ENSG00000010810.17	ENST00000354650.7	3628	14	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	76.1878711867993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-13	True	NA	2	True	ATTAAA	-23	NA	111873452	111660331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_82959.nic	chr6	-	2207	13	NIC	ENSG00000074935.14	novel	2225	12	NA	NA	0	-114	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	46.007472219195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACTTGTTATTGTT	-10	True	NA	-5	True	AATAAA	-17	NA	112087509	112070776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112085674_112085744_112086555_112086609_112087232_112087307_112087409
transcript_82960.known	chr6	-	2225	12	FSM	ENSG00000074935.14	ENST00000368662.10	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	28.3621794497619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTTCTAGCCTTAAC	17	True	NA	-5	True	AATAAA	-28	NA	112087482	112070662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_82965.nic	chr6	-	2174	11	NIC	ENSG00000074935.14	novel	2225	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	36.5635063964057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTTCTAGCCTTAAC	10	True	NA	-5	True	AATAAA	-28	NA	112087489	112070662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_82970.nic	chr6	-	2077	11	NIC	ENSG00000074935.14	novel	2225	12	NA	NA	3	-114	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	36.5635063964057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACTTGTTATTGTT	-7	True	NA	-5	True	AATAAA	-17	NA	112087506	112070776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_82973.nic	chr6	-	1783	11	NIC	ENSG00000074935.14	novel	2225	12	NA	NA	-4	187	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	36.5635063964057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTATAATTATTTATA	-14	True	NA	NA	False	AATAAA	-16	NA	112087513	112071077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_82980.nic	chr6	-	815	7	ISM	ENSG00000074935.14	ENST00000605457.5	1645	12	-58	4947	-38	159	5prime_fragment	FALSE	canonical	3	90	junction_1	20.7498326633146	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	112087567	112076275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_82982.known	chr6	+	2551	4	FSM	ENSG00000203778.8	ENST00000368656.7	2551	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	10.1434160364686	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAAAAGTGTAACATTC	-38	True	NA	NA	False	AATAAA	-24	NA	112087590	112102790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_112087721_112097040_112097202_112099269_112099409_112100669
transcript_82983.nnic	chr6	+	505	3	NIC	ENSG00000203778.8	novel	2551	4	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	84.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	-48	True	NA	20	True	AATAAA	-28	NA	112087580	112100895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_112087721_112099269_112099409_112100669
transcript_82984.known	chr6	+	598	4	FSM	ENSG00000203778.8	ENST00000604268.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.9556837726075	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	9	True	NA	20	True	AATAAA	-28	NA	112087637	112100895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_112087710_112097040_112097202_112099269_112099409_112100669
transcript_82986.known	chr6	-	619	2	FSM	ENSG00000112769.20	ENST00000368638.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGTTGAGAGTTGAA	-2	True	NA	NA	False	AATAAA	-23	NA	112254567	112253781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_112254292_112254458
transcript_82987.known	chr6	-	645	2	FSM	ENSG00000112769.20	ENST00000453937.2	645	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGATGTTGAGAGTTG	172	False	NA	NA	False	AATAAA	-21	NA	112254578	112253783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_112254292_112254441
transcript_82988.known	chr6	+	4296	2	FSM	ENSG00000277443.3	ENST00000612661.2	4296	2	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCTAAAATAGGATTTT	-26	True	NA	21	True	AATAAA	-24	NA	113857344	113863475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_113857848_113859682
transcript_83.known	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_+_4000_4500
transcript_830.known	chr1	+	2976	19	FSM	ENSG00000083444.17	ENST00000196061.5	2976	19	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_7	18.818578290851	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGGAAGATGCTCAGG	-1	True	NA	37	True	ATTAAA	-15	NA	11934716	11975537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11934856_11947975_11948068_11949772_11949907_11950356_11950521_11952622_11952736_11954829_11954894_11956916_11957015_11957841_11957944_11958515_11958648_11960645_11960768_11963531_11963637_11964174_11964301_11964643_11964786_11965479_11965594_11966250_11966317_11966986_11967092_11970669_11970817_11972871_11972998_11974652
transcript_83002.known	chr6	+	591	4	FSM	ENSG00000228624.8	ENST00000436876.6	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.89897948556636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGATCAGAGTCATCT	-10	True	NA	NA	False	TTTAAA	-16	NA	113970105	113995644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_113970279_113991892_113992121_113993342_113993488_113995599
transcript_83005.nnic	chr6	+	2431	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1559	66	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	17.4419672692682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	NA	False	NA	NA	False	AATAAA	-22	NA	114424052	114456700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_114425471_114425568_114425673_114448966_114449032_114455856
transcript_83007.nnic	chr6	+	1098	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1244	66	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	17.4419672692682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	NA	False	NA	NA	False	AATAAA	-22	NA	114424367	114456700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_114424453_114425568_114425673_114448966_114449032_114455856
transcript_83009.nnic	chr6	+	2529	3	NIC	ENSG00000228624.8	novel	786	6	NA	NA	-1559	66	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	18.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	NA	False	NA	NA	False	AATAAA	-22	NA	114424052	114456700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_114425673_114448966_114449032_114455856
transcript_83034.known	chr6	-	2000	14	FSM	ENSG00000196591.12	ENST00000519108.5	2000	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	854.106959475716	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	636	False	NA	24	True	ATTAAA	-14	NA	113970724	113940717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970479
transcript_83035.known	chr6	-	9737	14	FSM	ENSG00000196591.12	ENST00000519065.6	9737	14	0	0	0	0	multi-exon	FALSE	canonical	3	2717	junction_10	195.507835161324	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTCTTGCTGATCAC	9	True	NA	NA	False	AATAAA	-14	NA	113971148	113933027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
transcript_83046.known	chr6	-	733	3	FSM	ENSG00000196591.12	ENST00000521233.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	3070	junction_2	141.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTAGTTTGCTCCCCTGA	21	True	NA	NA	False	NA	NA	NA	113971136	113958426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113958767_113959905_113960019_113970856
transcript_83047.known	chr6	-	690	2	FSM	ENSG00000196591.12	ENST00000520170.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	3070	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTTACAATAA	20	True	NA	NA	False	NA	NA	NA	113971137	113959609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113960019_113970856
transcript_83048.known	chr6	-	2084	15	FSM	ENSG00000196591.12	ENST00000368632.6	2084	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	1100.97879690051	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	0	True	NA	24	True	ATTAAA	-14	NA	113971157	113940717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113962366_113962395_113970856
transcript_83054.known	chr6	+	6919	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_6	43.8360959231673	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	0	True	NA	22	True	ATTAAA	-15	NA	116100852	116249497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
transcript_83057.known	chr6	+	667	7	FSM	ENSG00000178425.14	ENST00000419791.3	667	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	176.240996617952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTAAAGTGGGTCCTG	-2	True	NA	NA	False	NA	NA	NA	116100850	116145495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116145437
transcript_83058.nnic	chr6	-	2528	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-49	0	multi-exon	FALSE	canonical	3	42	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	3	True	NA	-4	True	AATAAA	-15	NA	116254124	116249963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr6_-_116250419_116252051
transcript_8306.known	chr1	-	581	6	FSM	ENSG00000143248.13	ENST00000531954.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	467.750360769503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGAAGAACCTGGTGGA	12	True	NA	NA	False	NA	NA	NA	163321735	163147473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163306232_163306330_163321621
transcript_83060.known	chr6	-	4112	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	14	True	NA	-4	True	AATAAA	-15	NA	116254075	116249963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_116250000_116254100
transcript_83063.known	chr6	+	1127	3	FSM	ENSG00000188820.13	ENST00000368605.3	1127	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGAGTGCTTTTTTTC	-1	True	NA	4	True	AATAAA	-9	NA	116461374	116463771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116461430_116461871_116462455_116463282
transcript_83064.known	chr6	+	9787	2	FSM	ENSG00000178033.6	ENST00000368599.4	9787	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTTTCCTTTCTGTGCT	1	True	NA	NA	False	AATAAA	-20	NA	116511638	116524788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116512237_116515599
transcript_83065.nic	chr6	+	1242	9	NIC	ENSG00000111832.13	novel	1427	8	NA	NA	-7	-320	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	300.55105639475	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAATGTTCAAGGCTTC	-35	True	NA	NA	False	AATAAA	-20	NA	116571481	116593268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_116571656_116572857_116572986_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_83068.known	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	260.055724012829	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	-28	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_83069.known	chr6	+	5385	7	FSM	ENSG00000111832.13	ENST00000466444.7	5385	7	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_4	46.7285304236668	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAAAGCTACCTCAT	-13	True	NA	NA	False	AATAAA	-19	NA	116571503	116597675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_83070.known	chr6	+	857	7	FSM	ENSG00000111832.13	ENST00000368590.9	857	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	307.743760655228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGAATTTCTTAAATTG	-1	True	NA	NA	False	NA	NA	NA	116571408	116590298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116571656_116572857_116572986_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271
transcript_83072.nic	chr6	+	494	4	ISM	ENSG00000111832.13	ENST00000466444.7	5385	7	-22	8711	-7	-1334	5prime_fragment	FALSE	canonical	3	673	junction_1	29.8105126870818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAGAAGAAGCTGAAAA	-35	True	NA	NA	False	GATAAA	-38	NA	116571481	116588964	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841
transcript_83076.nic	chr6	-	1918	10	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	43.9621048934951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-28	True	NA	-1	True	AATAAA	-22	NA	116668812	116635617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116666913_116668565
transcript_83079.known	chr6	-	2167	10	FSM	ENSG00000153975.10	ENST00000368576.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	14.1220430096156	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	18	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116667208_116668565
transcript_8308.known	chr1	-	5670	5	FSM	ENSG00000143248.13	ENST00000313961.10	5670	5	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_1	45.2603579305334	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGAGTCCTCCTTGAC	-3	True	NA	-3	True	ATTAAA	-21	NA	163202916	163142298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163202791
transcript_83086.nnic	chr6	-	2107	2	NNC	ENSG00000153975.10	novel	1225	5	NA	NA	-5	-13752	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAAAACTAGCCAGGCC	-15	True	NA	NA	False	NA	NA	NA	116668799	116665755	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_116667208_116668144
transcript_83087.known	chr6	+	2150	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_14	23.9310233285378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	4	True	NA	2	True	AATAAA	-17	NA	116681210	116741866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
transcript_83089.known	chr6	+	11288	14	FSM	ENSG00000196911.11	ENST00000368564.7	11288	14	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_4	17.2290521122432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTATGCTTTTTA	4	True	NA	3	True	AATAAA	-18	NA	116681210	116741867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135
transcript_83094.nic	chr6	+	1499	2	ISM	ENSG00000196911.11	ENST00000356348.6	2150	15	-30	51206	-6	-8138	5prime_fragment	FALSE	canonical	3	93	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACGATATTTATTTAGA	-26	True	NA	NA	False	AAAAAG	-1	NA	116681180	116690660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_116681339_116689319
transcript_83097.known	chr6	+	3476	19	FSM	ENSG00000185002.10	ENST00000332958.3	3476	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.49897084035912	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAAAGGCTTGGTGC	-16	True	NA	NA	False	AATAAA	-19	NA	116877241	116932161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_116877499_116877795_116877953_116880543_116880668_116882366_116882429_116893986_116894065_116895179_116895208_116910934_116911043_116916007_116916086_116916200_116916315_116918036_116918087_116919136_116919297_116920309_116920455_116922041_116922152_116923106_116923225_116924668_116924792_116925452_116925660_116927026_116927540_116928758_116928972_116931330
transcript_83098.known	chr6	-	4590	8	FSM	ENSG00000047932.14	ENST00000052569.10	4590	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_6	19.4820692024272	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	13	False	NA	-3	True	AATAAA	-24	NA	117602528	117560268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117578899_117579065_117602003
transcript_83100.nnic	chr6	-	1254	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	-25	65199	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.03081145609604	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTAAGCCTCATGTTT	2208	False	NA	NA	False	ATTAAA	-17	NA	117675357	117608547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_117609147_117662905_117663067_117664629_117664863_117675096
transcript_83105.nnic	chr6	+	2086	5	NNC	ENSG00000153989.8	novel	4796	5	NA	NA	8	-2139	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	142.720881443466	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTCCAGTGACATTAC	9	True	NA	NA	False	AATAAA	-16	NA	117675476	117708588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_117675523_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_83107.known	chr6	+	4796	5	FSM	ENSG00000153989.8	ENST00000368494.4	4796	5	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	12.1860576069539	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTCCACATTCAGTTA	1	True	NA	NA	False	AATAAA	-14	NA	117675468	117710727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_117676086_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_83109.nic	chr6	-	2513	12	NIC	ENSG00000111860.14	novel	7373	13	NA	NA	-57	-4432	combination_of_known_junctions	TRUE	canonical	3	19	junction_7	5.74096487412616	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATTACCTTTGGAAAAT	-5	True	NA	NA	False	AAAAAG	-9	NA	118574125	118465212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_118465569_118469071_118469304_118470536_118470645_118479870_118479922_118480395_118480514_118481778_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118573990
transcript_8311.known	chr1	+	1964	14	FSM	ENSG00000143228.13	ENST00000271452.8	1964	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	30.8918709745411	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	-29	True	NA	38	True	AGTAAA	-45	NA	163321953	163355759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_83113.nnic	chr6	+	1189	3	NNC	ENSG00000286339.1	novel	906	3	NA	NA	8646	5458	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	24.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGATGACTCCGATAA	6	False	NA	3	True	AATAAA	-17	NA	118574305	118582298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_118574700_118576250_118576476_118581728
transcript_83114.nic	chr6	+	1018	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8612	0	8612	0	3prime_fragment	FALSE	canonical	3	57	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGTACCAAGATGCAAAT	NA	False	NA	26	True	ATTAAA	-29	NA	118574271	118576840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_118574700_118576250
transcript_83116.nic	chr6	+	2927	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8698	-1995	8698	1995	3prime_fragment	FALSE	canonical	3	57	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCCTGAGTGCTAGT	58	False	NA	10	True	AGTAAA	-18	NA	118574357	118578835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_118574700_118576250
transcript_83120.known	chr6	-	2442	7	FSM	ENSG00000111877.18	ENST00000316068.7	2442	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	13.9453297638393	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	44	False	NA	-2	True	AATAAA	-17	NA	118935114	118910596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
transcript_83122.known	chr6	+	2434	4	FSM	ENSG00000111875.8	ENST00000229595.6	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_3	78.8542960148653	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCAGTGGTTAATATAA	-34	True	NA	-63	True	AATAAA	-20	NA	118894151	118909171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_118894523_118900765_118900882_118905651_118905829_118907401
transcript_8313.known	chr1	+	1842	14	FSM	ENSG00000143228.13	ENST00000367900.7	1842	14	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	43.5309860393965	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGTTTTGTTTATT	0	True	NA	43	True	AATATA	-24	NA	163321934	163355764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_83132.nnic	chr6	-	806	5	NNC	ENSG00000111879.20	novel	2721	8	NA	NA	-3551	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	130.006490222604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	687	False	NA	0	True	AATAAA	-20	NA	119023617	119011176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023582
transcript_83133.nnic	chr6	-	811	5	NNC	ENSG00000111879.20	novel	2721	8	NA	NA	-3574	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	129.147928748393	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	664	False	NA	0	True	AATAAA	-20	NA	119023640	119011176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023600
transcript_83135.known	chr6	-	542	3	FSM	ENSG00000111879.20	ENST00000448815.2	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_2	24	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	4238	False	NA	0	True	AATAAA	-20	NA	119020066	119011176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_119011432_119016746_119016945_119019977
transcript_83136.known	chr6	+	3083	2	FSM	ENSG00000152661.9	ENST00000282561.4	3083	2	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_1	0	1651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATTCCGTGTGAT	3	True	NA	20	True	AATAAA	-23	NA	121435645	121449727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_121435833_121446831
transcript_83137.known	chr6	+	2596	13	FSM	ENSG00000025156.13	ENST00000368455.9	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	43.4040288708574	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	-2	True	NA	NA	False	AATATA	-11	NA	122399651	122433119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122427902_122427957_122431429_122431515_122431924
transcript_83138.known	chr6	+	2643	12	FSM	ENSG00000025156.13	ENST00000452194.5	2643	12	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_10	24.769015568476	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	-2	True	NA	NA	False	AATATA	-11	NA	122399550	122433119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122431429_122431515_122431924
transcript_8314.nic	chr1	+	1794	14	NIC	ENSG00000143228.13	novel	1842	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	64.0583129314323	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	0	True	NA	38	True	AGTAAA	-45	NA	163321934	163355759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_163322067_163326074_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_83140.known	chr6	-	3125	10	FSM	ENSG00000111897.7	ENST00000339697.5	3125	10	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_6	49.9461438346407	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGTGTACTGATTAT	-8	True	NA	-4	True	AATAAA	-15	NA	122471807	122443350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
transcript_83167.nnic	chr6	+	1535	7	NNC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	165.959248679374	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	NA	False	NA	17	True	ATTAAA	-23	NA	122482032	122725892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_122482267_122585920_122586008_122603503_122603624_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_83170.nnic	chr6	+	1476	7	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	189.279922043752	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	NA	False	NA	17	True	ATTAAA	-23	NA	122482032	122725892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122701439_122701501_122717786_122717964_122725127
transcript_83174.nic	chr6	+	1464	7	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	186.463058599344	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	NA	False	NA	17	True	ATTAAA	-23	NA	122482044	122725892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585492_122585554_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_83182.nnic	chr6	+	1415	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	381	junction_1	36.0255464913442	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	NA	False	NA	17	True	ATTAAA	-23	NA	122482032	122725892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_83183.nnic	chr6	+	1895	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	381	junction_1	36.0255464913442	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTCTCCTTCATTTT	NA	False	NA	19	True	AATAAA	-31	NA	122482032	122726372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_83188.nnic	chr6	+	1348	5	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	165.994540572875	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	NA	False	NA	17	True	ATTAAA	-23	NA	122482032	122725892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122717786_122717964_122725127
transcript_83198.known	chr6	+	785	4	FSM	ENSG00000164434.12	ENST00000368444.8	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.5106808355492	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTTGTTTCTAATA	-3	True	NA	6	True	AATAAA	-17	NA	122779715	122784074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122779868_122780290_122780464_122781092_122781195_122783716
transcript_83200.known	chr6	+	1755	7	FSM	ENSG00000172594.13	ENST00000539041.5	1755	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATGAAGTTTTCTT	246	False	NA	7	True	AATAAA	-18	NA	122789048	122809717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_122789459_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_83213.nnic	chr6	-	2928	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49183	1821	at_least_one_novel_splicesite	FALSE	canonical	3	178	junction_2	55.2190443338424	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTTTTCAGTCTACTA	NA	False	NA	-2	True	ATTAAA	-19	NA	123587726	123501829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_83215.nnic	chr6	-	980	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49193	-117	at_least_one_novel_splicesite	FALSE	canonical	3	178	junction_2	55.2190443338424	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAGGACAAAGAGAA	NA	False	NA	-43	True	AGTAAA	-32	NA	123587716	123503767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_83216.nnic	chr6	-	879	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49183	-228	at_least_one_novel_splicesite	FALSE	canonical	3	178	junction_2	55.2190443338424	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGTGAAGAAAAGAC	NA	False	NA	-1	True	AAGAAA	-13	NA	123587726	123503878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_83220.nnic	chr6	-	798	7	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49199	-8694	at_least_one_novel_splicesite	FALSE	canonical	3	178	junction_1	54.8738452169054	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAGAAAAAAGAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	123587710	123512344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_83227.nnic	chr6	-	826	6	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49110	12497	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_1	48.3760271208788	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAGTAAGAGA	NA	False	NA	NA	False	AAAAAG	-6	NA	123587799	123516183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_8323.known	chr1	+	1845	13	FSM	ENSG00000143228.13	ENST00000524800.5	1845	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	75.3169229913762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTGAAATATATATATT	NA	False	NA	6	True	AGTAAA	-13	NA	163321899	163355727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163347762_163347939_163348944_163349081_163355334
transcript_83233.nnic	chr6	-	803	5	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49110	-1792	at_least_one_novel_splicesite	FALSE	canonical	3	235	junction_1	34.5760032392409	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACATTTCATTTTATGT	NA	False	NA	NA	False	AATACA	-9	NA	123587799	123530505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_83239.nnic	chr6	-	1839	2	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49198	-40833	at_least_one_novel_splicesite	FALSE	canonical	3	314	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTTAAGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	123587711	123569546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123571133_123587458
transcript_83240.nnic	chr6	-	512	2	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49199	-42159	at_least_one_novel_splicesite	FALSE	canonical	3	314	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGTGTCCCCTCCAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	123587710	123570872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_123571133_123587458
transcript_83241.known	chr6	+	11433	6	FSM	ENSG00000146373.17	ENST00000521654.7	11433	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	6.38748776906852	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTCTTTTTTTCCAAT	-3	True	NA	18	True	AATAAA	-19	NA	124962436	125092633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_124963427_125045210_125045445_125057941_125058107_125076656_125076859_125081435_125081508_125082863
transcript_83243.known	chr6	+	1468	8	FSM	ENSG00000111907.21	ENST00000304877.17	1468	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.7949815095098	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	NA	False	NA	17	True	ATTAAA	-18	NA	125153648	125263497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125252021_125252037_125253716_125253756_125257097_125257159_125262833
transcript_83245.known	chr6	+	1022	7	FSM	ENSG00000111907.21	ENST00000532429.5	1022	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.9991829999919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCCGCTGGGAAAAACC	255	False	NA	NA	False	NA	NA	NA	125154188	125263044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125154533_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125257097_125257159_125262833
transcript_83246.known	chr6	+	1308	6	FSM	ENSG00000111907.21	ENST00000368402.9	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	56.577734136319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	-18	True	NA	17	True	ATTAAA	-18	NA	125153732	125263497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125262833
transcript_83247.known	chr6	+	999	6	FSM	ENSG00000111907.21	ENST00000527711.5	999	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	58.7312523278705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTCTGTGTAATTCG	42	False	NA	NA	False	TTTAAA	-36	NA	125153792	125263226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125257097_125257159_125262833
transcript_83248.known	chr6	+	2147	5	FSM	ENSG00000111907.21	ENST00000368388.6	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	50.2810849127184	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	14	True	NA	NA	False	AGTAAA	-26	NA	125153764	125264407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125262833
transcript_83249.known	chr6	+	811	5	FSM	ENSG00000111907.21	ENST00000534199.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	66.8744158852995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGATGATGGACCAC	128	False	NA	NA	False	NA	NA	NA	125154380	125263125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125154533_125220077_125220194_125229117_125229267_125248281_125248384_125262833
transcript_83250.known	chr6	+	2486	1	FSM	ENSG00000111907.21	ENST00000571678.1	2486	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAATTCTTAATTTCT	9116	False	NA	16	True	ATTAAA	-17	NA	125261010	125263496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125261000_125263500
transcript_83257.nnic	chr6	-	920	6	NNC	ENSG00000111906.18	novel	1446	6	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_5	330.191701894521	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATATTTATTGGAG	NA	False	NA	-30	True	AATAAA	-21	NA	125302157	125275881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_125276244_125277101_125277241_125292840_125292910_125298713_125298817_125300537_125300660_125302032
transcript_8326.known	chr1	+	779	4	FSM	ENSG00000143228.13	ENST00000487578.2	779	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	41.6999866773227	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTGAGTTCTTAAAA	3	True	NA	NA	False	NA	NA	NA	163321985	163328561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227
transcript_83261.nnic	chr6	-	817	5	NNC	ENSG00000111906.18	novel	1350	5	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_4	379.766046402255	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATATTTATTGGAG	NA	False	NA	-30	True	AATAAA	-21	NA	125302157	125275881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125302032
transcript_83266.known	chr6	-	509	5	FSM	ENSG00000237742.8	ENST00000606334.6	528	5	15	4	15	-4	multi-exon	FALSE	canonical	3	19	junction_4	6.80073525436772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-1	True	NA	-1	True	AATAAA	-21	NA	125745610	125578557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125744901_125745066_125745584
transcript_8327.nic	chr1	+	1116	4	ISM	ENSG00000143228.13	ENST00000497990.1	885	11	-111	16725	0	432	intron_retention	FALSE	canonical	3	114	junction_1	70.7405274381116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAACAACTTCAAGG	0	True	NA	NA	False	AGTAAA	-19	NA	163321934	163328993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227
transcript_83271.nnic	chr6	-	681	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37417	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	NA	False	NA	-1	True	AATAAA	-21	NA	125707611	125578557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_125578726_125645633_125645701_125707165
transcript_83272.known	chr6	-	475	5	FSM	ENSG00000237742.8	ENST00000427852.6	475	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	15.0228991875736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCCACATAGTTATCA	593	False	NA	-10	True	AATAAA	-12	NA	125745028	125578566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_125578726_125645633_125645701_125657428_125657467_125720423_125720508_125744901
transcript_83275.nnic	chr6	-	2296	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	13.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGACCCCACATAGCCA	NA	False	NA	14	True	AAAACA	-30	NA	125707423	125687840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_125689647_125694166_125694399_125707165
transcript_83277.nnic	chr6	-	2059	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	61	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGACCCCACATAGCCA	NA	False	NA	14	True	AAAACA	-30	NA	125707418	125687840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_125689647_125707165
transcript_83279.nnic	chr6	-	674	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	125707418	125701887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_-_125702309_125707165
transcript_83281.known	chr6	+	2626	5	FSM	ENSG00000135547.9	ENST00000368364.4	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	13.4420050587701	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATGTGGATGAGTTG	-8	True	NA	6	True	ATTAAA	-19	NA	125749631	125761269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125749860_125751800_125751880_125752006_125752091_125754464_125754547_125759116
transcript_83294.known	chr6	+	3325	5	FSM	ENSG00000111911.7	ENST00000229633.7	3325	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3.77491721763537	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTCTGGACTTTT	-2	True	NA	19	True	AATAAA	-21	NA	125956769	125980244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125957179_125966886_125967005_125972258_125972329_125974846_125974974_125977643
transcript_8330.known	chr1	+	6175	7	FSM	ENSG00000185630.19	ENST00000540236.3	6175	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	37.6961536499415	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTGTATTT	NA	False	NA	16	True	AATAAA	-17	NA	164792491	164851821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164820071_164820185_164821536_164821627_164846583
transcript_83302.known	chr6	+	2093	15	FSM	ENSG00000066651.20	ENST00000479748.5	2093	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	134.305944524782	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	20	True	NA	19	True	AATAAA	-22	NA	125986478	126039276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126008656_126008746_126009334_126009435_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_8331.known	chr1	+	6062	6	FSM	ENSG00000185630.19	ENST00000612123.3	6062	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	45.0510821179692	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTGTATTT	NA	False	NA	16	True	AATAAA	-17	NA	164792491	164851821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
transcript_83310.known	chr6	+	1889	13	FSM	ENSG00000066651.20	ENST00000368332.7	1889	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	95.9903062235395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	20	True	NA	19	True	AATAAA	-22	NA	125986478	126039276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021266_126038704
transcript_83311.known	chr6	+	1843	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	34.2031309483016	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	4	True	NA	19	True	AATAAA	-22	NA	125986539	126039276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_83313.nic	chr6	+	2081	13	NIC	ENSG00000066651.20	novel	1843	13	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	85.8671454437998	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	-6	True	NA	19	True	AATAAA	-22	NA	125986452	126039276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_125986774_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_83314.nic	chr6	+	1867	13	NIC	ENSG00000066651.20	novel	1843	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	95.7834652861454	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	21	True	NA	19	True	AATAAA	-22	NA	125986479	126039276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_125986623_125993792_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_8332.known	chr1	-	1966	10	FSM	ENSG00000143171.13	ENST00000359842.10	1966	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.4229164972073	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGAGCATGGGGTGTG	-16	True	NA	-1	True	AATAAA	-22	NA	165445126	165400921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_165401411_165406811_165406918_165408226_165408319_165409557_165409691_165410701_165410832_165410948_165411110_165417040_165417221_165419869_165420015_165428718_165428967_165444844
transcript_83321.known	chr6	+	809	3	FSM	ENSG00000203760.9	ENST00000368328.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_2	46.5	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGTCAAATCTAG	-44	True	NA	86	True	AAGAAA	-2	NA	126340114	126348875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_126340400_126346204_126346319_126348465
transcript_83322.known	chr6	+	528	3	FSM	ENSG00000203760.9	ENST00000368325.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	656	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	15	True	NA	15	True	ATTAAA	-17	NA	126340173	126348608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_126340445_126346204_126346319_126348465
transcript_83324.known	chr6	+	443	3	FSM	ENSG00000203760.9	ENST00000368326.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	724.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	15	True	NA	15	True	ATTAAA	-17	NA	126340173	126348608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_126340400_126346244_126346319_126348465
transcript_83325.known	chr6	+	903	1	FSM	ENSG00000217325.2	ENST00000567272.1	903	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCCCTGTCAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	126643487	126644390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_126643500_126644400
transcript_83329.nic	chr6	+	2117	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	45.7684389071771	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_127266926_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_8333.known	chr1	+	680	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	778.838183878183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	4	True	NA	30	True	AATAAA	-32	NA	165631239	165655620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_83330.known	chr6	+	2169	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	43.6942501938184	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_83331.known	chr6	+	568	5	FSM	ENSG00000118518.17	ENST00000610162.5	568	5	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	49.4286101362359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACATGCTTCCTAC	-2	True	NA	NA	False	NA	NA	NA	127266882	127286643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_83332.known	chr6	+	843	5	FSM	ENSG00000118518.17	ENST00000480444.1	843	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	50.658168146904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGAGGAAATGGTGAAT	3	True	NA	NA	False	NA	NA	NA	127266887	127286903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127282286_127282396_127286049_127286178_127286615
transcript_83334.nic	chr6	+	2380	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	47.2175814713121	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-10	True	NA	29	True	AATAAA	-20	NA	127266841	127288362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_127267096_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_83335.known	chr6	+	2267	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	20.5318181259127	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTGAGACTTAAAATTC	-3	True	NA	NA	False	AATAAA	-23	NA	127266848	127288567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
transcript_83337.known	chr6	+	884	4	FSM	ENSG00000118518.17	ENST00000476956.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	15.2534149181967	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGCAGCAAGTAGAG	53	False	NA	NA	False	NA	NA	NA	127266725	127286891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127286049_127286178_127286615
transcript_83339.nic	chr6	+	2166	4	NIC	ENSG00000118518.17	novel	762	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	45.2572891612193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	12	True	NA	29	True	AATAAA	-20	NA	127266863	127288362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_127267045_127280230_127280341_127286049_127286178_127286615
transcript_83341.known	chr6	+	2119	3	FSM	ENSG00000118518.17	ENST00000368314.6	2119	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	2	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	12	True	NA	NA	False	AATAAA	-18	NA	127266863	127288562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127266926_127280230_127280341_127286615
transcript_83343.known	chr6	+	2070	3	FSM	ENSG00000118518.17	ENST00000610153.1	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	10.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267096_127280230_127280341_127286615
transcript_83344.known	chr6	+	610	3	FSM	ENSG00000118518.17	ENST00000489534.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	32.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCAGTACGATGAGCGC	-2	True	NA	NA	False	AAGAAA	-6	NA	127266882	127286953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_127267045_127280230_127280341_127286615
transcript_83345.known	chr6	-	854	7	FSM	ENSG00000093144.19	ENST00000368292.10	854	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	300.752805473199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGAGCTATATTTG	-8	True	NA	NA	False	NA	NA	NA	127343359	127289987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127315933_127315975_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_83347.known	chr6	-	1009	7	FSM	ENSG00000093144.19	ENST00000430841.6	1009	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	308.075026936982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTTCGTGTGGATGT	211	False	NA	-135	True	AATAAA	-4	NA	127343398	127289868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_83352.known	chr6	-	2585	6	FSM	ENSG00000093144.19	ENST00000531967.5	2585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	300.799202126601	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	734	False	NA	-1	True	AATAAA	-22	NA	127342875	127288711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342355
transcript_83353.known	chr6	-	2339	6	FSM	ENSG00000093144.19	ENST00000454859.8	2339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	244.017704275735	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	0	True	NA	-1	True	AATAAA	-22	NA	127343609	127288711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_83355.known	chr6	-	909	6	FSM	ENSG00000093144.19	ENST00000368289.6	909	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	322.291420922121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATAATTGGTTTTTCGT	-8	True	NA	-143	True	AAGAAA	-11	NA	127343359	127289876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_83358.known	chr6	-	2443	6	FSM	ENSG00000093144.19	ENST00000474289.6	2443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	297.784754478801	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAACATTTTGTGTAA	5	True	NA	-9	True	AATAAA	-14	NA	127343346	127288719	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342960
transcript_8336.known	chr1	+	1158	6	FSM	ENSG00000143198.13	ENST00000367889.8	1158	6	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	163.952920071586	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCTGTTGCTTAAA	-2	True	NA	NA	False	AATAAA	-23	NA	165631233	165656136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631294_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_83361.known	chr6	-	1515	5	FSM	ENSG00000093144.19	ENST00000454591.6	1515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	292.361398785818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-7	True	NA	NA	False	ACTAAA	-3	NA	127343562	127289266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127343335
transcript_83363.known	chr6	-	1354	5	FSM	ENSG00000093144.19	ENST00000368291.6	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	271.418841460942	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCTGTCAATTCCA	10	True	NA	NA	False	AATATA	-16	NA	127343599	127289633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127343335
transcript_83370.known	chr6	-	1449	4	FSM	ENSG00000093144.19	ENST00000528402.5	1449	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	306.657608561876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	6	True	NA	NA	False	ACTAAA	-3	NA	127343549	127289266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127343335
transcript_83374.known	chr6	-	509	3	FSM	ENSG00000093144.19	ENST00000368287.1	509	3	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	90	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGTTTTGTTTTT	-7	True	NA	NA	False	NA	NA	NA	127343358	127326880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127327145_127330808_127331031_127343335
transcript_83375.known	chr6	-	1966	4	FSM	ENSG00000093144.19	ENST00000368295.8	1966	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.779297410952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCATAGATGTAAAAACTA	NA	False	NA	-51	True	NA	NA	NA	127331030	127288761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808
transcript_83378.known	chr6	-	6006	30	FSM	ENSG00000152894.15	ENST00000368226.9	6006	30	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_24	16.8842319618553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTATTGTTTGCACATCA	-7	True	NA	NA	False	AATAAA	-17	NA	128520599	127968784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_127970281_127973021_127973158_127973663_127973828_127976656_127976783_127976922_127977055_127981115_127981290_127982830_127982981_127983241_127983378_127985720_127985876_127990768_127990886_127991293_127991392_127992672_127992710_127995461_127995539_127996900_127996989_127998719_127998905_128005083_128005245_128009129_128009269_128064757_128064795_128067518_128067793_128078812_128078919_128082436_128082639_128083714_128083825_128089689_128089993_128184431_128184726_128218921_128219097_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_83382.known	chr6	-	563	4	FSM	ENSG00000152894.15	ENST00000532751.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	97.5841517187431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTACAATGAAGGAGAAC	-7	True	NA	NA	False	AAAAAG	-13	NA	128520599	128322250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_128322311_128397565_128397689_128409293_128409333_128520258
transcript_83383.known	chr6	-	1722	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGAGTTGAGTTTTC	5	True	NA	NA	False	AAAAAG	-22	NA	128520587	128321040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_128322311_128397565_128397689_128520258
transcript_83385.nic	chr6	-	721	2	ISM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	76256	0	-75046	5prime_fragment	FALSE	canonical	3	186	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAACAGAATAA	5	True	NA	NA	False	AATAAA	-31	NA	128520587	128397296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_128397689_128520258
transcript_83386.known	chr6	-	4414	15	FSM	ENSG00000146376.11	ENST00000368149.3	4414	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	4.96312936172577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATTCTTAAAGGAG	-1	True	NA	-1	True	AATAAA	-29	NA	129710177	129576131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_83388.nic	chr6	-	1495	11	ISM	ENSG00000146376.11	ENST00000368149.3	4414	15	-42	24670	-42	-22383	5prime_fragment	FALSE	canonical	3	44	junction_8	4.6743983570081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGACAGTCATGAATG	4	True	NA	NA	False	AATAAA	-9	NA	129710219	129600801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_83390.nnic	chr6	-	1959	11	NNC	ENSG00000164483.17	novel	2093	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	23.2680037820179	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	-4	True	NA	-13	True	AATAAA	-17	NA	130215642	130144314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130215472
transcript_83392.nic	chr6	-	2162	10	ISM	ENSG00000164483.17	ENST00000457563.6	1877	11	220	-3	-25	0	3prime_fragment	FALSE	canonical	3	47	junction_4	17.1147182345171	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	7321	False	NA	-13	True	AATAAA	-17	NA	130215667	130144314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194
transcript_83395.nic	chr6	-	1323	6	ISM	ENSG00000164483.17	ENST00000457563.6	1877	11	313	31323	68	117	internal_fragment	FALSE	canonical	3	65	junction_3	11.1964280018227	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAACATCTCGTGTCC	16	True	NA	-6	True	AAGAAA	-17	NA	130215574	130175640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194
transcript_83397.nic	chr6	-	1164	6	ISM	ENSG00000164483.17	ENST00000457563.6	1877	11	278	31517	33	0	internal_fragment	FALSE	canonical	3	65	junction_3	11.1964280018227	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTCCTAAATGTTCTG	-19	True	NA	-13	True	ATTAAA	-22	NA	130215609	130175834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194
transcript_834.known	chr1	+	4407	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	34.4484316688648	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGATCTGTCTTTTT	2	True	NA	14	True	AATAAA	-17	NA	11980443	12013508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_8340.known	chr1	+	1002	2	FSM	ENSG00000143198.13	ENST00000461308.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGCAACTACAGCGCAG	-10	True	NA	NA	False	AATGAA	-35	NA	165631225	165650774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165631294_165649840
transcript_83401.known	chr6	-	4186	18	FSM	ENSG00000079819.19	ENST00000527411.5	4186	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.35009679348	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAACTTGTCACTTCTCT	24	False	NA	-12	True	AATAAA	-13	NA	131063258	130839352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_130840595_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_83402.known	chr6	-	4247	18	FSM	ENSG00000079819.19	ENST00000628542.2	4247	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_17	45.679112457215	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	131063322	130839346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_83406.known	chr6	-	3914	18	FSM	ENSG00000079819.19	ENST00000530481.5	3914	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	114.496611515114	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-9	True	NA	-6	True	AATAAA	-19	NA	131063225	130839346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869811_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_83408.nnic	chr6	-	4101	17	NIC	ENSG00000079819.19	novel	4247	18	NA	NA	14	0	intron_retention	FALSE	canonical	3	12	junction_1	96.4247601760046	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-7	True	NA	-6	True	AATAAA	-19	NA	131063289	130839346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_130840599_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_83413.known	chr6	+	2281	8	FSM	ENSG00000118507.18	ENST00000683794.1	2281	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	11.8166261285201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	10	True	NA	5	True	AATAAA	-17	NA	131135466	131283532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131135783_131145284_131145417_131160058_131160199_131165080_131165218_131169112_131169274_131199460_131199574_131219660_131219809_131282398
transcript_83418.known	chr6	+	2461	2	FSM	ENSG00000118507.18	ENST00000342266.4	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	13	False	NA	5	True	AATAAA	-17	NA	131250158	131283532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131250617_131281529
transcript_83419.nnic	chr6	+	1419	2	NIC	ENSG00000118507.18	novel	2461	2	NA	NA	-98	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	-5	True	NA	5	True	AATAAA	-17	NA	131250331	131283532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_131250617_131282398
transcript_8342.known	chr1	-	2696	11	FSM	ENSG00000143149.13	ENST00000354775.5	2395	11	-301	0	-301	0	multi-exon	FALSE	canonical	3	388	junction_10	42.1354957251009	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATCGTGTTTTGAAAC	NA	False	NA	-7	True	AATAAA	-18	NA	165698863	165662215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_165663145_165665017_165665131_165667308_165667451_165668925_165669014_165669261_165669451_165679441_165679583_165680486_165680684_165682106_165682242_165682980_165683111_165695251_165695398_165698377
transcript_83420.known	chr6	-	5247	29	FSM	ENSG00000112282.18	ENST00000368068.8	5247	29	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_18	24.873865475102	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-35	True	NA	-9	True	AATAAA	-20	NA	131628242	131586731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_83424.nic	chr6	-	1800	11	ISM	ENSG00000112282.18	ENST00000539158.1	1636	15	-182	7217	0	-7217	5prime_fragment	FALSE	canonical	3	97	junction_2	11.9452919595965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGAATAGTCTC	-35	True	NA	NA	False	NA	NA	NA	131628242	131609515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_83425.nic	chr6	-	1915	9	ISM	ENSG00000112282.18	ENST00000539158.1	1636	15	-182	15166	0	9496	5prime_fragment	FALSE	canonical	3	99	junction_5	10.087120500916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTAATGCCGTAACTG	-35	True	NA	NA	False	AAGAAA	-11	NA	131628242	131617464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_83426.known	chr6	+	7438	25	FSM	ENSG00000197594.14	ENST00000647893.1	7438	25	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	14.470695963452	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGCTTTCCTTTGT	1	True	NA	14	True	AATAAA	-15	NA	131808019	131895155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131808276_131847775_131847849_131849989_131850107_131851141_131851268_131852174_131852236_131854925_131855024_131858667_131858748_131860386_131860507_131861594_131861705_131864505_131864572_131864865_131864939_131868017_131868127_131869357_131869490_131872069_131872102_131872922_131873051_131874267_131874338_131875775_131875864_131876991_131877162_131878541_131878594_131879879_131880035_131882344_131882475_131883693_131883775_131884930_131885064_131886561_131886725_131890340
transcript_83429.nnic	chr6	+	2827	4	Fusion	ENSG00000236673.5_ENSG00000280058.1	novel	601	3	NA	NA	-66	-3	multi-exon	FALSE	canonical	3	43	junction_2	42.2400547137693	53	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7917	False	NA	10	True	AATAAA	-16	NA	131901896	131920562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr6_+_131902152_131903946_131904235_131910784_131910956_131918449
transcript_83432.nnic	chr6	+	2825	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-110	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	66	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7873	False	NA	10	True	AATAAA	-16	NA	131901852	131920562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131903946_131904235_131918324
transcript_83433.nnic	chr6	+	2807	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-217	-3	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	21	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7766	False	NA	10	True	AATAAA	-16	NA	131901745	131920562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_83435.nnic	chr6	+	2607	3	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-134	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	10.5	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7849	False	NA	10	True	AATAAA	-16	NA	131901828	131920562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131910784_131910956_131918449
transcript_83437.nnic	chr6	+	2470	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.5	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7917	False	NA	10	True	AATAAA	-16	NA	131901896	131920562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_131902152_131904132_131904235_131918449
transcript_83439.known	chr6	+	2305	2	FSM	ENSG00000236673.5	ENST00000454596.1	2305	2	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	27	False	NA	13	True	AATAAA	-19	NA	131901962	131920565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_131902152_131918449
transcript_83448.known	chr6	-	15845	10	FSM	ENSG00000079950.14	ENST00000367941.7	15845	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	20.9608688916122	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCATTTTTACATTTT	-32	True	NA	NA	False	TATAAA	-23	NA	132513116	132445866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_132460851_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_83457.known	chr6	-	1090	10	FSM	ENSG00000079950.14	ENST00000367937.4	1090	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	62.8737712493144	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTTGAATGTAGTT	111	False	NA	NA	False	NA	NA	NA	132513198	132461713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_132461861_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_83461.nic	chr6	-	2574	15	NIC	ENSG00000146409.12	novel	2421	15	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	87.9462092092986	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	NA	False	NA	-2	True	AATAAA	-21	NA	132798678	132769369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132790784_132790866_132796981_132797122_132798413
transcript_83467.known	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	28.3590670930927	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-6	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
transcript_8349.known	chr1	-	1912	7	FSM	ENSG00000143183.18	ENST00000367881.11	1912	7	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_4	38.9358446678636	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAGAGTTGAATTATTA	7	True	NA	NA	False	AATAAA	-22	NA	165768868	165726794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
transcript_83492.known	chr6	+	503	6	FSM	ENSG00000112306.8	ENST00000230050.4	503	6	0	0	0	0	multi-exon	FALSE	canonical	3	6218	junction_1	1371.47284333304	38936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	0	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_132814614_132814731_132814783_132814971_132815089_132816460_132816564_132816959_132817062_132817479
transcript_83496.known	chr6	+	639	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	3440.23388739777	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	0	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
transcript_835.known	chr1	+	4514	18	FSM	ENSG00000116688.18	ENST00000674817.1	4514	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	67.328045745771	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGAGATCTGTCTT	9522	False	NA	11	True	AATAAA	-14	NA	11980188	12013505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_11980485_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_8350.known	chr1	-	1100	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	210.471494506976	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-1	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
transcript_83521.known	chr6	+	1280	2	FSM	ENSG00000118526.7	ENST00000367882.5	1280	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGATATTTGGAGTGAT	0	True	NA	NA	False	AATAAA	-22	NA	133889112	133892257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_133889848_133891712
transcript_83528.known	chr6	+	4199	7	FSM	ENSG00000028839.10	ENST00000237264.9	4199	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	49.724798195222	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTATGCATTTT	-1	True	NA	9	True	AATAAA	-22	NA	133953223	133990432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
transcript_83531.known	chr6	+	808	6	FSM	ENSG00000028839.10	ENST00000367871.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	54.2785408794304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTCATACCAAGATAGA	0	True	NA	NA	False	NA	NA	NA	133953194	133984723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576
transcript_83535.known	chr6	-	3245	14	FSM	ENSG00000118515.12	ENST00000367858.10	3245	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	18.0403886128258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATATATTGTGTCATG	-5	True	NA	-9	True	AATAAA	-14	NA	134318112	134169255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134207355_134207432_134261932_134262149_134317391
transcript_83536.known	chr6	-	2401	12	FSM	ENSG00000118515.12	ENST00000237305.11	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_11	6.61078507734467	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATTGTGTCATGTGTT	3447	False	NA	-5	True	AATAAA	-18	NA	134174896	134169251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_83537.known	chr6	-	2686	12	FSM	ENSG00000118515.12	ENST00000413996.7	2686	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	12.2804689387406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTCATGTGTTAT	2352	False	NA	-3	True	AATAAA	-20	NA	134175991	134169249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134175543
transcript_83540.known	chr6	-	7087	18	FSM	ENSG00000112339.15	ENST00000367837.10	7087	18	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_7	74.9939328572514	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGTAAAAAGAGAATAT	-15	True	NA	NA	False	NA	NA	NA	135054822	134960377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_83548.known	chr6	-	2793	5	FSM	ENSG00000112339.15	ENST00000367822.9	2793	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	388.637684739913	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGCATGTTCTTTGA	NA	False	NA	3	True	AATAAA	-22	NA	135054884	135035856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_83552.nic	chr6	+	2162	7	ISM	ENSG00000118513.20	ENST00000531845.5	3230	15	9871	4	0	0	3prime_fragment	FALSE	canonical	3	21	junction_1	10.8576649832682	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTACTTTTGTTTTCTCTC	-3	True	NA	7	True	AATAAA	-17	NA	135195747	135219167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_135196003_135198907_135199051_135200084_135200200_135200289_135200416_135201638_135201750_135203216_135203325_135217863
transcript_83553.known	chr6	-	3638	23	FSM	ENSG00000135541.22	ENST00000327035.10	3638	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.896439548659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGGCTTTTTTGATTTT	-1	True	NA	1	True	AATAAA	-14	NA	135497745	135387783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135388034_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_83556.known	chr6	-	5303	29	FSM	ENSG00000135541.22	ENST00000681340.1	5303	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	19.5529109477492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAGACCTATCCAAAT	-37	True	NA	NA	False	TATAAA	-2	NA	135497781	135284418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495538_135495710_135497187_135497250_135497582
transcript_83557.nic	chr6	-	1316	8	ISM	ENSG00000135541.22	ENST00000265602.11	6063	29	-38	179605	-3	0	5prime_fragment	FALSE	canonical	3	13	junction_5	26.047836684039	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-34	True	NA	NA	False	AAAAAG	-2	NA	135497778	135463136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_83559.nic	chr6	-	1231	7	ISM	ENSG00000135541.22	ENST00000327035.10	3638	23	-33	75353	-3	0	5prime_fragment	FALSE	canonical	3	20	junction_5	20.7765893896632	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-34	True	NA	NA	False	AAAAAG	-2	NA	135497778	135463136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_83563.nic	chr6	-	1166	6	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-50	68815	0	0	5prime_fragment	FALSE	canonical	3	46	junction_5	13.7317151150175	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-31	True	NA	NA	False	AAAAAG	-2	NA	135497775	135463136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_83565.nic	chr6	-	1028	6	ISM	ENSG00000135541.22	ENST00000327035.10	3638	23	-33	78063	-3	-2710	5prime_fragment	FALSE	canonical	3	20	junction_4	22.7121113065254	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCCAGTCTTCTCTA	-34	True	NA	NA	False	AAAAAG	-13	NA	135497778	135465846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_83567.known	chr6	-	1074	5	FSM	ENSG00000135541.22	ENST00000524469.5	1074	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	29.0376910239089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	7	True	NA	NA	False	AAAAAG	-2	NA	135497737	135463136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_135463307_135465813_135466374_135490622_135490748_135492227_135492292_135497582
transcript_83568.nic	chr6	-	963	5	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-50	71525	0	-2710	5prime_fragment	FALSE	canonical	3	46	junction_4	14.3418095092635	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCCAGTCTTCTCTA	-31	True	NA	NA	False	AAAAAG	-13	NA	135497775	135465846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_83576.known	chr6	-	1789	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	7.68513008932158	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTGTTTTGTAGCA	-21	True	NA	-10	True	AATAAA	-14	NA	136250311	136231033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
transcript_83577.known	chr6	-	1524	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	20.6792807675031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTAGCAACCAAAATTC	9916	False	NA	0	True	AATAAA	-24	NA	136250324	136231023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
transcript_83582.known	chr6	-	4373	13	FSM	ENSG00000029363.17	ENST00000527759.5	4373	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	202.846000700038	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACCTAGATTACAGCC	17	True	NA	NA	False	NA	NA	NA	136289795	136259690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
transcript_83585.known	chr6	-	5371	12	FSM	ENSG00000029363.17	ENST00000527536.5	5371	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	203.388485497724	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-17	True	NA	-16	True	AATAAA	-17	NA	136289829	136258585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_83589.known	chr6	-	2423	9	FSM	ENSG00000029363.17	ENST00000529826.5	2423	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	265.3474137805	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATTACAAGGAATACA	-32	True	NA	0	True	AAGAAA	-16	NA	136289844	136269475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136269613_136271994_136272077_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_83592.nic	chr6	-	2307	8	ISM	ENSG00000029363.17	ENST00000628517.2	2512	10	-12	2732	-12	-77	5prime_fragment	FALSE	canonical	3	714	junction_4	52.8513510340318	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTTTTTGAATGTAAT	757	False	NA	-1	True	AAGAAA	-8	NA	136289863	136271995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_83593.nic	chr6	-	1702	5	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-19	6612	-12	-533	5prime_fragment	FALSE	canonical	3	714	junction_1	69.7334209687149	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGACAAAAATTCTGA	757	False	NA	-23	True	NA	NA	NA	136289863	136276087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_83595.known	chr6	-	5640	14	FSM	ENSG00000029363.17	ENST00000527613.5	5640	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	283.15003236518	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATAACTGCTGTTGTTTG	17	True	NA	-23	True	AATAAA	-10	NA	136289795	136258592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_83596.known	chr6	-	4186	13	FSM	ENSG00000029363.17	ENST00000530767.5	4186	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	212.361719714265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGCATGACTATGTG	31	True	NA	0	True	AATAAA	-32	NA	136289781	136259350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_83597.known	chr6	-	2512	10	FSM	ENSG00000029363.17	ENST00000628517.2	2512	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	248.634493003507	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAAAACTTTGGAATAG	-39	True	NA	NA	False	NA	NA	NA	136289851	136269263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_83598.known	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_12	64.9126642438804	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	4	True	NA	-31	True	AATAAA	-19	NA	136550422	136342733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_83603.known	chr6	-	4497	17	FSM	ENSG00000135525.19	ENST00000618822.4	4497	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	169.847725919425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTCCTTCCTACACC	1119	False	NA	NA	False	NA	NA	NA	136550819	136342280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_83608.nic	chr6	-	942	8	ISM	ENSG00000135525.19	ENST00000354570.8	3758	18	-52	29767	-52	-28661	5prime_fragment	FALSE	canonical	3	569	junction_2	62.4633770251638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCTGTTGGGAGCA	1464	False	NA	NA	False	NA	NA	NA	136550474	136372500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_83609.known	chr6	-	2519	8	FSM	ENSG00000027697.15	ENST00000646898.1	2519	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	110.524537861001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	227	False	NA	-15	True	AATAAA	-3	NA	137219160	137197496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137215266_137215378_137218671
transcript_83612.known	chr6	-	2492	7	FSM	ENSG00000027697.15	ENST00000644894.1	2492	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	93.4482922975767	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	143	False	NA	-15	True	AATAAA	-3	NA	137219244	137197496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137218671
transcript_83613.known	chr6	-	2074	7	FSM	ENSG00000027697.15	ENST00000367739.9	2074	7	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_4	20.0582485111072	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	2	True	NA	-3	True	AATAAA	-15	NA	137219385	137197484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219242
transcript_83616.known	chr6	-	4198	3	FSM	ENSG00000112378.12	ENST00000421351.4	4198	3	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	38	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGAGCATGCGTG	0	True	NA	-1	True	AATAAA	-15	NA	138107419	138088504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_138092269_138096353_138096495_138107126
transcript_83618.known	chr6	+	14859	34	FSM	ENSG00000112379.9	ENST00000251691.5	14859	34	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_22	8.63758630367024	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTTACAGAATTCT	-37	True	NA	59	True	AATAAA	-13	NA	138161938	138344663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_138162172_138170661_138170714_138207041_138207124_138209909_138210042_138229783_138229853_138238508_138238632_138242951_138242995_138245512_138245592_138253879_138253985_138255435_138255770_138261526_138261640_138262700_138263612_138278450_138278618_138279998_138280165_138285945_138286054_138286700_138286917_138287073_138287185_138289817_138289969_138291732_138292054_138293992_138294127_138296809_138296956_138298605_138298786_138307252_138307398_138308738_138308862_138311406_138311511_138313794_138313940_138317250_138317380_138319702_138319880_138321110_138321226_138323670_138323774_138324022_138324155_138328020_138328143_138333969_138335189_138336294
transcript_83619.known	chr6	-	7500	7	FSM	ENSG00000135540.12	ENST00000427025.6	7500	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.8927197372091	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAATATTTCTTTTT	-3	True	NA	-13	True	AATAAA	-17	NA	138572540	138422042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_138424817_138429710_138429844_138430392_138433681_138447000_138447194_138473305_138473434_138496218_138496372_138571709
transcript_83620.known	chr6	+	10010	4	FSM	ENSG00000051620.11	ENST00000607197.6	10010	4	0	0	0	0	multi-exon	TRUE	canonical	3	1137	junction_3	166.317634529702	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGTCTTTTTTAG	-63	True	NA	NA	False	ATTAAA	-18	NA	138404222	138422197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_138404598_138405144_138405281_138405970_138406152_138412879
transcript_83621.known	chr6	+	703	3	FSM	ENSG00000225177.6	ENST00000458733.5	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	1904	False	NA	26	True	AATAAA	-19	NA	138694389	138697288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_138694548_138696596_138696756_138696902
transcript_83622.known	chr6	+	1247	6	FSM	ENSG00000024862.18	ENST00000617445.5	1247	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	15.0253119767944	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGTCTGTTTTGAA	0	True	NA	9	True	AATAAA	-19	NA	138773768	138793319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_138773903_138776078_138776279_138779821_138779986_138785226_138785382_138788365_138788389_138792748
transcript_83625.known	chr6	-	3161	20	FSM	ENSG00000135597.19	ENST00000258062.9	3161	20	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	73.371479208333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGGAGGGTAGATTGT	4	True	NA	-15	True	AATAAA	-16	NA	138988261	138904869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_83627.known	chr6	-	2468	19	FSM	ENSG00000135597.19	ENST00000529597.5	2468	19	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_8	92.8207485319133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGATTGTGTTTGTTGG	667	False	NA	-6	True	AATAAA	-25	NA	138987640	138904860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_83632.nnic	chr6	+	952	4	NNC	ENSG00000146386.8	novel	782	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	688.090594810499	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	-40	True	NA	31	True	AATAAA	-23	NA	139028681	139043302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_139028876_139033748_139033856_139034154_139034222_139042718
transcript_83634.known	chr6	+	782	3	FSM	ENSG00000146386.8	ENST00000367660.4	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_2	1	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	23	True	NA	31	True	AATAAA	-23	NA	139028744	139043302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_139028876_139034154_139034222_139042718
transcript_83639.known	chr6	-	1732	4	FSM	ENSG00000238099.3	ENST00000454788.3	1732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTGACTCCGAAGAAT	NA	False	NA	NA	False	AATAAA	-40	NA	139474638	139468994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_139470461_139472526_139472596_139472931_139473056_139474565
transcript_83640.known	chr6	-	608	2	FSM	ENSG00000234147.3	ENST00000683641.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	140898448	140845957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_140846305_140898187
transcript_83641.known	chr6	-	677	3	FSM	ENSG00000234147.3	ENST00000683340.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	5	True	NA	NA	False	CATAAA	-18	NA	140898411	140845957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_140846305_140852818_140852925_140898187
transcript_83644.known	chr6	+	6991	8	FSM	ENSG00000009844.16	ENST00000367630.9	6991	8	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_5	94.219890443059	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTCTATTATATCAT	-3	True	NA	23	True	AATAAA	-16	NA	142147262	142224685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_83649.known	chr6	+	3272	7	FSM	ENSG00000009844.16	ENST00000620996.4	3272	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	410.650872261206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGGCTCTCCGAGTG	NA	False	NA	3	True	AATAAA	-16	NA	142147161	142220946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142218497
transcript_8365.known	chr1	+	4801	7	FSM	ENSG00000143179.16	ENST00000367879.9	4801	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	39.2743201369829	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCCTTCTGTGTGATGC	15	True	NA	16	True	AATAAA	-16	NA	165827613	165911618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_165827933_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_83658.nnic	chr6	+	1204	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-3	-272	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	108.574731048353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAGAAATATGTTAAA	117	False	NA	8	True	AATAAA	-16	NA	143060849	143340018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
transcript_83659.nnic	chr6	+	1490	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-3	14	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	108.574731048353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	117	False	NA	11	True	AATAAA	-18	NA	143060849	143340304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
transcript_83662.known	chr6	+	2136	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	39.9469648408987	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCTCTCTGTCTCTC	-8	True	NA	NA	False	ATTAAA	-19	NA	143060888	143341058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
transcript_83670.nnic	chr6	+	1305	5	NIC	ENSG00000146416.19	novel	2136	6	NA	NA	-3	14	combination_of_known_splicesites	FALSE	canonical	2	12	junction_3	109.407495172863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	117	False	NA	11	True	AATAAA	-18	NA	143060849	143340304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_143061067_143136834_143136991_143165081_143165184_143333281_143333446_143339638
transcript_83677.known	chr6	+	3393	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	113.743375875501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	4	True	NA	NA	False	AATAAA	-26	NA	143060900	143190597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
transcript_8368.known	chr1	+	473	3	FSM	ENSG00000229588.3	ENST00000653824.2	2342	3	59	1810	59	-1810	multi-exon	FALSE	canonical	0	0	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTCTCTGGTTCTTCT	34	False	NA	NA	False	ATTAAA	-17	NA	166165910	166339090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_166166055_166335327_166335466_166338899
transcript_83682.known	chr6	+	444	4	FSM	ENSG00000146416.19	ENST00000447498.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	95.9073627112237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATGTAACTGGCATGT	120	False	NA	NA	False	NA	NA	NA	143060852	143333293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143165081_143165184_143284109_143284226_143333281
transcript_83683.nic	chr6	+	704	3	NIC	ENSG00000146416.19	novel	559	2	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	41.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	-23	True	NA	33	True	AATAAA	-27	NA	143060462	143061606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_143060654_143060946_143061067_143061213
transcript_83684.nnic	chr6	+	742	3	NNC	ENSG00000146416.19	novel	559	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	38	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	23	True	NA	33	True	AATAAA	-27	NA	143060508	143061606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_143060738_143060946_143061067_143061213
transcript_83685.nic	chr6	+	2290	2	ISM	ENSG00000146416.19	ENST00000629020.2	3636	4	-49	51690	-3	-48907	5prime_fragment	FALSE	canonical	3	304	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTAAACATGAGTATAG	117	False	NA	NA	False	NA	NA	NA	143060849	143138907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_143061067_143136834
transcript_83686.known	chr6	+	559	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	4	True	NA	33	True	AATAAA	-27	NA	143060900	143061606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143061213
transcript_83687.known	chr6	+	3636	4	FSM	ENSG00000146416.19	ENST00000629020.2	3636	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	130.853607770923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	2	True	NA	NA	False	AATAAA	-26	NA	143060898	143190597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187387
transcript_83688.nnic	chr6	+	1752	6	Fusion	ENSG00000146416.19_ENSG00000217648.1	novel	2136	6	NA	NA	0	227	multi-exon	FALSE	canonical	3	10	junction_5	99.487888710134	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATACATTCCTTTTAC	-8	True	NA	-8	True	AATAAA	-11	NA	143060888	143343610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143342574
transcript_83689.nnic	chr6	+	1636	5	Fusion	ENSG00000146416.19_ENSG00000217648.1	novel	2136	6	NA	NA	0	227	multi-exon	FALSE	canonical	2	10	junction_4	133.58517881861	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATACATTCCTTTTAC	-8	True	NA	-8	True	AATAAA	-11	NA	143060888	143343610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr6_+_143061067_143136834_143136991_143165081_143165184_143333281_143333446_143342574
transcript_8369.known	chr1	+	5751	6	FSM	ENSG00000143157.12	ENST00000367876.9	5751	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	39.2907113705008	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCATACCTTAGTTG	-22	True	NA	NA	False	AAAAAG	-21	NA	166839474	166856359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
transcript_83695.known	chr6	-	6244	6	FSM	ENSG00000189007.16	ENST00000237283.9	6244	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	32.4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTTAAAATATTATTT	2	True	NA	-23	True	AATAAA	-23	NA	143450695	143422831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_143428507_143428611_143428685_143432504_143432612_143433830_143433982_143438589_143438695_143450562
transcript_83702.nic	chr6	-	510	3	ISM	ENSG00000189007.16	ENST00000237283.9	6244	6	22	10856	0	-10856	5prime_fragment	FALSE	canonical	3	80	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCTTTTTAAATAGTA	24	True	NA	NA	False	AATATA	-22	NA	143450673	143433687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_143433982_143438589_143438695_143450562
transcript_83704.known	chr6	+	2750	12	FSM	ENSG00000034693.15	ENST00000367591.5	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_7	18.8263047905349	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAATGGATTGGAATT	0	True	NA	NA	False	AATAAA	-20	NA	143450804	143490616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143451116_143459084_143459217_143462915_143462998_143468121_143468166_143470960_143471086_143471382_143471450_143471556_143471612_143472159_143472329_143474785_143474857_143479075_143479199_143485151_143485249_143489142
transcript_83709.known	chr6	-	2385	7	FSM	ENSG00000001036.14	ENST00000002165.11	2385	7	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_3	51.2978773656593	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATATTTTCTTTCTTC	-10	True	NA	NA	False	CATAAA	-18	NA	143511720	143494811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
transcript_83714.known	chr6	+	2569	13	FSM	ENSG00000112419.15	ENST00000440869.7	9633	13	0	7064	0	-43	multi-exon	FALSE	canonical	1	24	junction_5	103.288296637239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAGAAAATTGAA	-20	True	NA	-21	True	AAGAAA	-24	NA	143677964	143824121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_83716.known	chr6	+	4367	12	FSM	ENSG00000112419.15	ENST00000367582.7	4367	12	0	0	0	0	multi-exon	FALSE	canonical	1	71	junction_10	67.509534068031	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATTTTGCAGAATATG	-2	True	NA	NA	False	ATTAAA	-15	NA	143677982	143826177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_8372.known	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	56.9496734505339	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-13	True	NA	-3	True	AATAAA	-16	NA	166876264	166856509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
transcript_83721.nic	chr6	+	1861	9	ISM	ENSG00000112419.15	ENST00000440869.7	9633	13	-17	53802	-17	11718	5prime_fragment	FALSE	canonical	3	24	junction_5	113.925345621596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTCTATACTATAG	-37	True	NA	26	True	AAGAAA	-12	NA	143677947	143777383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_83723.nic	chr6	+	1621	8	ISM	ENSG00000112419.15	ENST00000367582.7	4367	12	-35	48794	-17	11718	5prime_fragment	FALSE	canonical	3	207	junction_5	45.2561868585898	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTCTATACTATAG	-37	True	NA	26	True	AAGAAA	-12	NA	143677947	143777383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_83727.known	chr6	+	825	4	FSM	ENSG00000112419.15	ENST00000402863.3	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	24.4994331000173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAAGTAATAATC	34	True	NA	NA	False	ATTAAA	-4	NA	143678018	143754138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753
transcript_83730.known	chr6	+	1853	11	FSM	ENSG00000135521.9	ENST00000367576.6	1853	11	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	40.1492216611979	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTGGTGTATTCATTT	-35	True	NA	15	True	ATTAAA	-24	NA	143843337	143863812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085_143863287_143863416
transcript_83739.nic	chr6	+	1475	10	ISM	ENSG00000135521.9	ENST00000367576.6	1853	11	-63	571	-63	-571	5prime_fragment	FALSE	canonical	3	397	junction_1	41.3387093278067	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATAAAAGAGCAAGAAA	NA	False	NA	NA	False	AATGAA	-7	NA	143843274	143863241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085
transcript_83752.known	chr6	-	690	1	FSM	ENSG00000169976.7	ENST00000367569.4	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1436	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGGTGTGAACTTTC	-4	True	NA	-7	True	CATAAA	-17	NA	144095573	144094883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_144094900_144095600
transcript_83753.known	chr6	+	3220	25	FSM	ENSG00000152818.19	ENST00000367526.8	3220	25	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	24.3086347255913	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCGGCCAACCAATGTTT	-6	True	NA	NA	False	NA	NA	NA	144583209	144851003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_144583601_144678405_144678579_144700086_144700244_144730356_144730487_144748245_144748515_144751805_144751953_144754719_144754799_144757928_144757990_144771906_144771969_144774289_144774365_144781921_144782124_144789193_144789280_144793833_144793992_144797823_144797991_144803035_144803148_144820881_144821019_144827347_144827387_144827610_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
transcript_83762.nic	chr6	-	1834	10	NIC	ENSG00000146414.17	novel	5245	24	NA	NA	-10	1937	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	19.5624987674042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGTCAACCATTTAT	-10	True	NA	NA	False	AGTAAA	-34	NA	145964107	145943622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145963730
transcript_83763.nic	chr6	-	1705	10	ISM	ENSG00000146414.17	ENST00000519632.5	5245	24	19	26510	-15	1937	5prime_fragment	FALSE	canonical	3	20	junction_8	15.9891938817332	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGTCAACCATTTAT	40	False	NA	NA	False	AGTAAA	-34	NA	145964404	145943622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145964156
transcript_83768.known	chr6	-	7596	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_29	18.0697551814812	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGAATTCTTTGATTTC	-3	True	NA	NA	False	AATAAA	-21	NA	145964358	145884806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
transcript_83769.nic	chr6	-	2101	9	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	-78	58816	-44	1937	5prime_fragment	FALSE	canonical	3	39	junction_8	9.81070843517429	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGTCAACCATTTAT	NA	False	NA	NA	False	AGTAAA	-34	NA	145964467	145943622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_8377.known	chr1	-	682	1	FSM	ENSG00000272205.1	ENST00000606967.1	682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCGTGAATTTTATTT	1808	False	NA	-4	True	AATAAA	-17	NA	167220512	167219830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_167219800_167220500
transcript_83771.nic	chr6	-	1947	9	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	-78	58970	-44	1783	5prime_fragment	FALSE	canonical	3	39	junction_8	9.81070843517429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAACTAGAAAATCAG	NA	False	NA	-12	True	ATTAAA	-41	NA	145964467	145943776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_83774.nic	chr6	-	1542	7	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	31	61439	0	-686	5prime_fragment	FALSE	canonical	3	39	junction_6	9.39266853573691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATGCCCTCGTAAGTA	-3	True	NA	NA	False	AAAAAG	-40	NA	145964358	145946245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_83777.nic	chr6	-	758	2	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	2	70021	2	-9268	5prime_fragment	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGATGAGTATTTGTGA	-32	True	NA	NA	False	NA	NA	NA	145964387	145954827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_145955355_145964156
transcript_83778.known	chr6	+	4557	4	FSM	ENSG00000235652.10	ENST00000606388.6	4557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACTACTGCTACTAAG	1309	False	NA	NA	False	AATAAA	-3	NA	145814835	145887035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_145815432_145828360_145828421_145881578_145881649_145883204
transcript_83779.known	chr6	+	2881	3	FSM	ENSG00000235652.10	ENST00000658327.1	2881	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAGTTGGAAATAA	-7	True	NA	NA	False	NA	NA	NA	145814894	145873177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_145815432_145828360_145828457_145870929
transcript_83781.known	chr6	-	9051	3	FSM	ENSG00000118496.5	ENST00000237281.5	9051	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	19	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTATGCTTTTGTATT	-15	True	NA	NA	False	AATAAA	-16	NA	145814795	145793501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_145800310_145804371_145806422_145814602
transcript_83787.known	chr6	-	2475	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	37.0828651655841	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTAGTTTTTTTTTC	-18	True	NA	NA	False	NA	NA	NA	149546043	149504494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_83795.nic	chr6	-	1244	12	ISM	ENSG00000131013.4	ENST00000253329.3	2475	13	-54	7735	-54	-6955	5prime_fragment	FALSE	canonical	3	321	junction_2	38.4094943496832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAGAAGAAAACCCATCA	NA	False	NA	NA	False	AGTAAA	-4	NA	149546097	149512229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_83800.known	chr6	+	1943	8	FSM	ENSG00000055211.14	ENST00000367419.10	1943	8	0	0	0	0	multi-exon	TRUE	canonical	3	247	junction_6	12.1873135778521	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	4	True	NA	28	True	AATAAA	-29	NA	149566374	149591748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580592_149580724_149582439_149582604_149590726
transcript_83806.nnic	chr6	-	2192	11	NNC	ENSG00000186625.14	novel	1898	11	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_10	48.5118542214169	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	10	True	NA	-8	True	AATAAA	-23	NA	149648660	149594872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648120
transcript_83807.known	chr6	-	1898	11	FSM	ENSG00000186625.14	ENST00000367411.7	1898	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	19.7142080743813	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-4	True	NA	-8	True	AATAAA	-23	NA	149648714	149594872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_83810.nnic	chr6	-	1730	10	NIC	ENSG00000186625.14	novel	1898	11	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	54.9059802450213	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-11	True	NA	-8	True	AATAAA	-23	NA	149648721	149594872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149648468
transcript_8384.known	chr1	+	4978	6	FSM	ENSG00000197965.12	ENST00000359523.7	4978	6	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_5	66.8413045952875	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTAGTAATTTTATAA	-8	True	NA	NA	False	AATAAA	-17	NA	167721981	167791919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167776063_167776167_167787819
transcript_83844.known	chr6	+	1938	8	FSM	ENSG00000120265.19	ENST00000367384.7	1938	8	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_7	353.97002063763	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	NA	False	NA	NA	False	AATAAA	-19	NA	149749442	149811420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802370_149810615
transcript_83846.known	chr6	+	1686	8	FSM	ENSG00000120265.19	ENST00000464889.7	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	469.535767258144	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	-12	True	NA	NA	False	AATAAA	-18	NA	149749740	149811419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_83849.known	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	23.279140176281	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-3	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
transcript_83850.known	chr6	+	1293	7	FSM	ENSG00000120265.19	ENST00000367378.6	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	1588	junction_4	99.3099804763963	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGTCTGCCCTTATTT	NA	False	NA	22	True	ATTAAA	-15	NA	149749443	149802530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199
transcript_83853.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000544496.5	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	690.55889200946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	NA	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_8386.known	chr1	+	3302	20	FSM	ENSG00000143164.16	ENST00000367843.7	3302	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	34.9334943925012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTTTATTTAATGC	-26	True	NA	17	True	ATTAAA	-29	NA	167936660	168075843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168022987_168023048_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_83862.known	chr6	+	3211	5	FSM	ENSG00000111981.5	ENST00000229708.4	3211	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.11803398874989	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTTCCATCTTGTTCT	0	True	NA	NA	False	ATTAAA	-21	NA	149963942	149973715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_149964135_149968606_149968871_149969084_149969361_149970015_149970148_149971368
transcript_83865.nic	chr6	+	871	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	158.949998555572	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	-31	True	NA	34	True	ATTAAA	-40	NA	150866479	150899021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
transcript_83867.nic	chr6	+	872	2	ISM	ENSG00000131016.17	ENST00000354675.10	6287	3	-183	7572	-183	15	5prime_fragment	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAACAAGAAAAAGAACC	-6	True	NA	16	True	NA	NA	NA	151325504	151349201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_151325886_151348710
transcript_83869.nic	chr6	+	1626	2	ISM	ENSG00000131016.17	ENST00000359755.5	6190	3	11488	0	11472	0	3prime_fragment	FALSE	canonical	3	456	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTGGTTTTATTAG	926	False	NA	15	True	AATAAA	-16	NA	151353173	151356773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_151353753_151355726
transcript_8387.known	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	16.9934627953745	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	21	True	NA	8	True	ATTAAA	-20	NA	167936707	168075834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_83873.known	chr6	-	1948	12	FSM	ENSG00000155906.20	ENST00000444024.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_8	21.4734123514762	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTATCTACATCACT	4	True	NA	-1	True	AATAAA	-16	NA	151452126	151404761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_83876.nic	chr6	-	1385	11	NIC	ENSG00000155906.20	novel	1413	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	74.0394489444647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGGTGATCATTTAAT	-17	True	NA	-19	True	AATAAA	-27	NA	151452147	151404853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436419_151436555_151452015
transcript_83877.known	chr6	-	1340	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	56.8527923676577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-28	True	NA	-49	True	NA	NA	NA	151452158	151404883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
transcript_83879.known	chr6	-	841	3	FSM	ENSG00000155906.20	ENST00000491268.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTTATAGGATCATTA	112	False	NA	NA	False	ATTAAA	-44	NA	151452018	151436234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151436555_151445307_151445826_151452015
transcript_83880.known	chr6	-	915	2	FSM	ENSG00000155906.20	ENST00000643564.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAATTCTTCATCAAGT	4	True	NA	NA	False	AATAAA	-16	NA	151452074	151444969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_151445826_151452015
transcript_83882.known	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	58.0624663616695	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	-30	True	NA	17	True	AATAAA	-18	NA	151452465	151470101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
transcript_83884.known	chr6	+	712	4	FSM	ENSG00000146476.11	ENST00000494826.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	461.598189867431	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGGATTTGAGCTTG	-10	True	NA	NA	False	AAAAAG	-32	NA	151452485	151468542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_151452587_151458327_151458573_151464452_151464619_151468342
transcript_83886.known	chr6	+	5306	11	FSM	ENSG00000120262.10	ENST00000239374.8	5306	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.03315017762062	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTGTTGGATTTCCCT	-26	True	NA	NA	False	AATAAA	-28	NA	151494016	151621193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_151494186_151536317_151536447_151538044_151538302_151544571_151544717_151548303_151548490_151573173_151573492_151585888_151586090_151593106_151593281_151596334_151596578_151615442_151615680_151617946
transcript_83889.nnic	chr6	+	995	2	NNC	ENSG00000120279.7	novel	3030	2	NA	NA	-14612	-699	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGATTACAATCCTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	152683284	152722585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_152683436_152721741
transcript_83891.nnic	chr6	+	2979	2	NNC	ENSG00000120279.7	novel	3030	2	NA	NA	-14612	0	intron_retention	FALSE	canonical	3	67	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATTCAAAATTCATTT	NA	False	NA	18	True	AATAAA	-17	NA	152683284	152724569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_152683436_152721741
transcript_83892.known	chr6	-	3700	7	FSM	ENSG00000112031.16	ENST00000367233.10	3700	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	48.9341961776788	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-7	True	NA	-108	True	AATAAA	-33	NA	153002709	152987361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_83893.known	chr6	-	2054	5	FSM	ENSG00000112029.10	ENST00000229758.8	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	27.8242250565941	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGCTTAATGTATACC	4	True	NA	NA	False	AATAAA	-16	NA	152983041	152970534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152982856
transcript_83894.known	chr6	-	2221	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	145.53070981755	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAATGTATACCTTTTAT	1	True	NA	NA	False	AATAAA	-22	NA	152983579	152970528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
transcript_83895.known	chr6	+	2090	3	FSM	ENSG00000227627.4	ENST00000637995.1	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGCGGTGGCTCACA	-3	True	NA	NA	False	ATTAAA	-6	NA	152983330	152990541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_152983488_152987955_152988023_152988675
transcript_83896.known	chr6	+	3246	3	FSM	ENSG00000227627.4	ENST00000671635.1	3246	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTGTTACGAGAATT	-3	True	NA	NA	False	NA	NA	NA	152983718	152991322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_152984251_152987955_152988023_152988675
transcript_83898.known	chr6	+	1478	3	FSM	ENSG00000227627.4	ENST00000654706.2	1512	3	33	1	7	-1	multi-exon	FALSE	canonical	3	8	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCGTCTTGTTTATTCT	4	True	NA	2	True	CATAAA	-14	NA	152983725	152990006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_152983806_152987955_152988023_152988675
transcript_83902.nnic	chr6	-	1053	5	NNC	ENSG00000091844.8	novel	7932	5	NA	NA	-29	-2269	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	19.0656759649376	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGTGGCATACATTAT	NA	False	NA	NA	False	AATAAA	-17	NA	153131311	153006727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_153007124_153024261_153024497_153026453_153026544_153043899_153044044_153131123
transcript_83903.known	chr6	-	7932	5	FSM	ENSG00000091844.8	ENST00000206262.2	7932	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	4.81534007106456	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGAAAGTTACTGTTT	-23	True	NA	-8	True	AATAAA	-16	NA	153131282	153004458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131123
transcript_83905.known	chr6	-	447	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGCATGGAGGGAGTTTC	19	False	NA	-51	True	NA	NA	NA	153282733	153282286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_153282300_153282700
transcript_83906.known	chr6	+	3275	21	FSM	ENSG00000146426.19	ENST00000456877.6	3275	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.7626305625051	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACTGTTCATT	887	False	NA	NA	False	TTTAAA	-33	NA	155149108	155257200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_155149227_155164414_155164601_155165262_155165410_155176815_155176978_155179038_155179144_155179377_155179457_155182225_155182319_155183236_155183501_155211203_155211308_155240529_155240710_155244010_155244080_155244657_155244784_155245622_155245732_155247999_155248180_155249850_155249970_155250912_155251022_155251944_155252004_155252947_155253054_155253972_155254061_155254418_155254574_155256483
transcript_83908.nic	chr6	-	1172	7	NIC	ENSG00000029639.11	novel	2799	7	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	213.977932403217	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	142	False	NA	NA	False	AATAAA	-26	NA	155314550	155257652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_83910.known	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_4	40.0946796138008	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-5	True	NA	-2	True	AATAAA	-20	NA	155314484	155256133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_83919.nic	chr6	-	2096	5	ISM	ENSG00000029639.11	ENST00000367166.5	2799	7	-66	27716	-57	13111	5prime_fragment	FALSE	canonical	3	564	junction_2	38.6999677002449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACCAGTGACCATGT	142	False	NA	NA	False	AATAAA	-3	NA	155314550	155283849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_83922.known	chr6	-	433	3	FSM	ENSG00000029639.11	ENST00000470239.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAGATACAGTACAA	-5	True	NA	NA	False	AATAAA	-6	NA	155314484	155257672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_155257909_155311331_155311340_155314295
transcript_83924.known	chr6	-	4322	4	FSM	ENSG00000215712.11	ENST00000400788.9	4322	4	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	8.64098759787715	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATAAAGCTCATTCTT	1	True	NA	NA	False	ATTAAA	-15	NA	157323519	157289024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_157293000_157318781_157318920_157322704_157322806_157323411
transcript_83929.known	chr6	-	3936	17	FSM	ENSG00000122335.17	ENST00000647468.2	3936	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.8262155823408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTTCATTGTACAA	-5	True	NA	-21	True	AATAAA	-15	NA	158168262	158109518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_8393.known	chr1	-	2177	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_3	49.7543967906355	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTTTCACTTCCTT	-18	True	NA	-12	True	ATTAAA	-12	NA	167936040	167916728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
transcript_83938.known	chr6	-	2022	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	9.46017430913319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGCATTGTAATAATT	-23	True	NA	NA	False	NA	NA	NA	158168280	158114592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_83939.known	chr6	-	1993	14	FSM	ENSG00000122335.17	ENST00000646562.1	1993	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	21.8298964426821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAATGTTTTGCTTTTA	27	True	NA	NA	False	NA	NA	NA	158168230	158114534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158158272_158158365_158168139
transcript_83942.nic	chr6	-	1497	6	ISM	ENSG00000122335.17	ENST00000367101.5	1907	16	-27	31189	-6	0	5prime_fragment	FALSE	canonical	3	75	junction_3	6.85273667960473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATATCTTCTCTGGTTAT	-29	True	NA	NA	False	AATAAA	-17	NA	158168286	158145919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_83944.known	chr6	+	1102	4	FSM	ENSG00000272047.4	ENST00000648328.1	1102	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	308.063124844388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAACAGAGAGACCCTG	-6	True	NA	NA	False	AAAACA	-17	NA	158168349	158192881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158168396_158170469_158170539_158187039_158187122_158191976
transcript_83946.known	chr6	+	7483	3	FSM	ENSG00000272047.4	ENST00000607778.2	7483	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	110.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCACAGCCTGTTTT	-6	True	NA	NA	False	AATAAA	-17	NA	158168349	158199344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158168396_158170469_158170539_158191976
transcript_83947.nnic	chr6	+	1160	3	FSM	ENSG00000272047.4	ENST00000691867.1	2718	3	0	1558	0	4	multi-exon	FALSE	canonical	2	43	junction_1	417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCCTGCCTTTTTAA	-6	True	NA	12	True	ATTAAA	-14	NA	158168349	158192414	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158169003_158170469_158170539_158191976
transcript_83955.known	chr6	-	730	5	FSM	ENSG00000146425.11	ENST00000367089.8	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	1709	junction_4	137.823256382949	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-7	True	NA	-3	True	AATAAA	-16	NA	158644743	158636473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
transcript_83956.nnic	chr6	-	700	4	NIC	ENSG00000146425.11	novel	730	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	118	junction_3	888.02064540565	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-19	True	NA	-3	True	AATAAA	-16	NA	158644755	158636473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_-_158636898_158637127_158637206_158637770_158637895_158644681
transcript_83960.known	chr6	-	774	3	FSM	ENSG00000146425.11	ENST00000367085.3	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	1709	junction_2	61.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAACTTAAGTGACCT	-2	True	NA	NA	False	NA	NA	NA	158644738	158637219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158637895_158641318_158641361_158644681
transcript_83968.known	chr6	-	3052	14	FSM	ENSG00000092820.19	ENST00000367075.4	3052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1096.46204034484	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCACGGGTGTGTG	0	True	NA	-10	True	AATAAA	-16	NA	158819368	158765747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_8397.known	chr1	-	7806	6	FSM	ENSG00000143147.15	ENST00000271357.9	7806	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	38.4884398228871	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTGGAAATGGTGAAT	110	False	NA	-30	True	ATTAAA	-19	NA	168137573	168079542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168137389
transcript_8398.nnic	chr1	+	2037	8	NNC	ENSG00000143155.13	novel	2998	7	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	173.502925929572	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	NA	False	NA	14	True	AATAAA	-18	NA	168178852	168202109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902_168200705_168201774
transcript_83981.nic	chr6	-	1150	10	ISM	ENSG00000092820.19	ENST00000367075.4	3052	14	-45	5126	-45	-5126	5prime_fragment	FALSE	canonical	0	0	junction_6	1301.43209817986	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGAGAGAAACCGTGG	NA	False	NA	-49	True	NA	NA	NA	158819413	158770873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_83988.nic	chr6	-	799	7	ISM	ENSG00000092820.19	ENST00000367075.4	3052	14	-45	17841	-45	-55	5prime_fragment	FALSE	canonical	0	0	junction_3	1592.116585625	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAAGGAACAGACCTTT	NA	False	NA	NA	False	GATAAA	-4	NA	158819413	158783588	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_83990.known	chr6	-	3068	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1135.84684511406	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGGTGTGTGCTTGTGT	6	True	NA	-3	True	AATAAA	-23	NA	158818227	158765740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
transcript_83991.known	chr6	+	980	4	FSM	ENSG00000203711.15	ENST00000650421.2	1135	4	106	49	19	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	63	False	NA	NA	False	AATAAA	-22	NA	158869957	158910353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158870311_158873527_158873622_158895220_158895367_158909966
transcript_83992.known	chr6	+	985	3	FSM	ENSG00000203711.15	ENST00000653976.1	985	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	38	False	NA	NA	False	AATAAA	-22	NA	158869853	158910353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158870311_158895225_158895367_158909966
transcript_83993.known	chr6	+	1020	4	FSM	ENSG00000203711.15	ENST00000658761.1	1020	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTGCTTTGCAAGGA	15	False	NA	NA	False	AATAAA	-16	NA	158869909	158910347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158870311_158873529_158873622_158895220_158895367_158909966
transcript_83995.known	chr6	+	1296	3	FSM	ENSG00000271913.8	ENST00000659171.1	1296	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGTCCTGCAGGAACA	-19	True	NA	NA	False	AATATA	-29	NA	158999860	159028296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_158999911_159025948_159026042_159027143
transcript_83997.known	chr6	+	1774	3	FSM	ENSG00000271913.8	ENST00000667828.1	1774	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATAGACATATTTAAAA	43	False	NA	NA	False	NA	NA	NA	158999922	159028354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159000393_159025948_159026042_159027143
transcript_83999.known	chr6	-	2352	12	FSM	ENSG00000120438.12	ENST00000321394.12	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	2104	junction_11	137.741103415966	2140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTATCTTACCTCG	-7	True	NA	-14	True	AATAAA	-23	NA	159789602	159778497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159788057_159788144_159789404
transcript_84.known	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2837	junction_1	156	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV2_-_3826_3966_4480_4687
transcript_840.known	chr1	+	1541	10	FSM	ENSG00000116691.11	ENST00000235332.6	1541	10	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	94.818475045091	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	-2	True	NA	31	True	AATAAA	-22	NA	12019497	12032045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_84002.known	chr6	-	1878	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	696.894224398509	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTACACATTAAAGTAA	NA	False	NA	-73	True	NA	NA	NA	159789703	159778986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
transcript_8401.known	chr1	+	2998	7	FSM	ENSG00000143155.13	ENST00000367833.7	2998	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	144.413757424053	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	4	True	NA	14	True	AATAAA	-18	NA	168178961	168202109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902
transcript_84011.known	chr6	+	1520	9	FSM	ENSG00000120437.9	ENST00000367048.5	1520	9	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_5	177.607669809049	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTAATTTAATAAGATCA	13	True	NA	-23	True	NA	NA	NA	159762044	159779112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159762143_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
transcript_84026.known	chr6	+	3656	8	FSM	ENSG00000146457.16	ENST00000358372.8	3656	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	218.044369197591	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	8545	False	NA	15	True	AATAAA	-23	NA	159725584	159756319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_84030.known	chr6	-	1403	8	FSM	ENSG00000120438.12	ENST00000544255.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	1021.95393082795	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGTAAACTTGGGTT	-1	True	NA	-50	True	ATTAAA	-8	NA	159789596	159778963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159787742_159787872_159789404
transcript_84034.known	chr6	+	1623	7	FSM	ENSG00000146457.16	ENST00000614346.4	1623	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	217.154834673839	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTGGTTTTTTTTTT	1	True	NA	13	True	ATTAAA	-15	NA	159726997	159749416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_84043.known	chr6	+	3280	8	FSM	ENSG00000146457.16	ENST00000650096.1	3280	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	232.450301908048	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGGTTTTTTTTTG	-1	True	NA	NA	False	NA	NA	NA	159726995	159755713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159750011_159753459_159753615_159755027
transcript_84045.known	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	156.641501524979	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	8	True	NA	43	True	TTTAAA	-16	NA	159693234	159679063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_84047.known	chr6	-	815	5	FSM	ENSG00000112096.19	ENST00000367054.6	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	217.492959656169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGCATTATGCTTGC	1207	False	NA	-9	True	AATAAA	-21	NA	159693228	159679115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159692660_159692864_159693144
transcript_84048.known	chr6	-	14167	5	FSM	ENSG00000112096.19	ENST00000538183.7	14167	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	26.042033330752	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTTACTTCTTGA	1	True	NA	NA	False	AATAAA	-14	NA	159693241	159669068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_84055.known	chr6	-	991	4	FSM	ENSG00000112096.19	ENST00000337404.8	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	221.956452185258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTTATAGAAAA	1157	False	NA	NA	False	NA	NA	NA	159693278	159682164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159682639_159684853_159685034_159692660_159692864_159693144
transcript_84060.known	chr6	-	1718	2	FSM	ENSG00000285427.1	ENST00000535372.1	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGACATATTGAAACCAAA	NA	False	NA	NA	False	AATAAA	-26	NA	159762332	159760257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_159761637_159761993
transcript_84062.known	chr6	+	758	4	FSM	ENSG00000112110.10	ENST00000476826.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	387.439744419123	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTGGGCTTCAGAAGC	-5	True	NA	-96	True	TTTAAA	-21	NA	159789811	159798313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159789889_159790939_159791127_159797286_159797519_159798051
transcript_84067.nnic	chr6	+	1001	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	223	junction_1	315.827308649662	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	40	False	NA	20	True	AATAAA	-20	NA	159789856	159798429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
transcript_84070.nnic	chr6	+	1336	4	NNC	ENSG00000112110.10	novel	970	4	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	346.641986300948	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	5	True	NA	20	True	AATAAA	-20	NA	159789951	159798429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_159790640_159790939_159791127_159797286_159797370_159798051
transcript_84072.known	chr6	+	970	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	122.901044204948	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	-18	True	NA	20	True	AATAAA	-20	NA	159790466	159798429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
transcript_84079.known	chr6	+	1075	4	FSM	ENSG00000112110.10	ENST00000480842.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	418.538993271701	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGACATTGTCTGAG	32	True	NA	27	True	AATAAA	-27	NA	159790516	159798436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_159790788_159790939_159791127_159797286_159797519_159798051
transcript_8408.known	chr1	+	727	5	FSM	ENSG00000143155.13	ENST00000367830.3	727	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	172.662061553776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACAAGTATGGTTATTC	10	False	NA	NA	False	AATAAA	-27	NA	168179054	168192395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168192207
transcript_84082.known	chr6	-	2409	11	FSM	ENSG00000112499.13	ENST00000366953.8	2409	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	2.96816441593117	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGATCATTTTTTAGTC	-1	True	NA	NA	False	AATAAA	-23	NA	160258821	160216754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_160217499_160224704_160224805_160241473_160241587_160242293_160242403_160243571_160243787_160245438_160245546_160247183_160247299_160249215_160249385_160250547_160250703_160256613_160256718_160258343
transcript_84084.known	chr6	-	1536	3	FSM	ENSG00000213071.11	ENST00000639825.1	1536	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACAGTCTGCACTGCCA	2	True	NA	NA	False	NA	NA	NA	160520269	160491890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_160492963_160500780_160500941_160519965
transcript_84088.nnic	chr6	+	1159	3	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_2	134	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAATCTGTTT	-1	True	NA	NA	False	AAAAAG	-10	NA	160883286	160888223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_+_160883784_160886516_160886701_160887745
transcript_84092.nnic	chr6	+	1166	3	NNC	ENSG00000220913.1	novel	489	3	NA	NA	-22483	-7305	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	6	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATCTTCCAATCAGTT	-1	True	NA	17	True	AGTAAA	-18	NA	160883286	160906333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_160883784_160898548_160898654_160905769
transcript_84094.nnic	chr6	+	860	2	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	316	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGGCTTATGGAACTTA	-1	True	NA	NA	False	AATAAA	-15	NA	160883286	160886879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_+_160883784_160886516
transcript_84096.nnic	chr6	+	2220	2	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	316	junction_1	0	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCTGTTTTCATTTG	NA	False	NA	NA	False	AAAAAG	-17	NA	160883277	160888230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_+_160883784_160886516
transcript_84098.nnic	chr6	+	2225	2	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATCTGTT	-1	True	NA	NA	False	AAAAAG	-9	NA	160883286	160888222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr6_+_160883784_160886494
transcript_84100.known	chr6	-	310	2	FSM	ENSG00000224371.6	ENST00000437861.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATGCATCAGAGTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	160880394	160872887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_160873126_160880322
transcript_84101.known	chr6	+	5445	27	FSM	ENSG00000085511.20	ENST00000366920.6	5445	27	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_15	21.3864484549163	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATATTGTCTTTTAA	37	False	NA	27	True	AATAAA	-20	NA	160991813	161117382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093840_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_84105.nnic	chr6	-	1794	9	NNC	ENSG00000026652.15	novel	7923	9	NA	NA	165	-6095	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	41.0182886039874	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTATGTTGACAT	362	False	NA	-2	True	ATTAAA	-17	NA	161273798	161136073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273696
transcript_84106.known	chr6	-	7923	9	FSM	ENSG00000026652.15	ENST00000320285.9	7923	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	18.9270804668866	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTCTCTACACTGCCT	0	True	NA	5	True	AATAAA	-28	NA	161274061	161129966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
transcript_84109.known	chr6	-	7705	8	FSM	ENSG00000026652.15	ENST00000366911.9	7705	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	46.4942392744981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAAAAATGCACGTC	-4	True	NA	-7	True	AATAAA	-16	NA	161274025	161129978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161232035_161232303_161273937
transcript_84113.known	chr6	-	942	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGACATCACCTCTGC	128	False	NA	NA	False	NA	NA	NA	161274032	161165837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_161166418_161232035_161232303_161273937
transcript_84114.known	chr6	+	9384	8	FSM	ENSG00000112531.17	ENST00000361752.8	9384	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	54.5407542810972	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCTAGATTTCTAGAT	3	True	NA	NA	False	ATTAAA	-20	NA	163414717	163578592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
transcript_84118.known	chr6	-	2230	8	FSM	ENSG00000164458.10	ENST00000366876.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.35606035749581	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTCGTCCAGTTATTA	2	True	NA	NA	False	AATAAA	-15	NA	166167851	166157655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166158589_166160836_166160967_166162446_166162624_166164604_166164667_166164799_166164862_166165705_166165841_166166591_166166857_166167385
transcript_84120.known	chr6	-	659	9	FSM	ENSG00000198818.10	ENST00000478705.5	659	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_8	495.676557847958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCCCATAAAACACTC	-21	True	NA	NA	False	NA	NA	NA	166342576	166320155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_84125.known	chr6	-	1033	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	1106	junction_4	69.4353318284175	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTGAATCAAATTTA	10	True	NA	-13	True	AATAAA	-20	NA	166342545	166319727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
transcript_8413.known	chr1	+	11040	8	FSM	ENSG00000213064.10	ENST00000271375.7	11040	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	11.5493616750901	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTAGTGTTGTCTCTT	-20	True	NA	12	True	AATAAA	-22	NA	168226003	168253021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_84142.known	chr6	+	3461	2	FSM	ENSG00000286760.2	ENST00000666448.1	3461	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATCTCACTTGATC	-18	True	NA	NA	False	NA	NA	NA	166342631	166351444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166342727_166348078
transcript_84143.known	chr6	-	1192	5	FSM	ENSG00000060762.19	ENST00000621685.4	1192	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	88.9982443647064	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-1	True	NA	NA	False	AATAAA	-21	NA	166383013	166364918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166365454_166365973_166366107_166366794_166366892_166366968_166367188_166382805
transcript_84146.known	chr6	-	976	4	FSM	ENSG00000060762.19	ENST00000341756.10	976	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	85.8409381744321	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-1	True	NA	NA	False	AATAAA	-21	NA	166383013	166364918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166365454_166365973_166366107_166366794_166366895_166382805
transcript_84147.nic	chr6	-	1721	2	ISM	ENSG00000071242.12	ENST00000509742.1	1204	6	10126	-1064	10126	0	3prime_fragment	FALSE	canonical	3	95	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAGAA	NA	False	NA	-109	True	NA	NA	NA	166413858	166411231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_-_166412888_166413793
transcript_84148.known	chr6	-	8614	9	FSM	ENSG00000026297.17	ENST00000508775.6	8614	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	95.592805037827	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATTAATTGACTCAAGT	-3	True	NA	NA	False	AATAAA	-27	NA	166956550	166922112	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166956096
transcript_84153.known	chr6	+	13956	13	FSM	ENSG00000213066.13	ENST00000366847.9	13956	13	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	76.0333899605225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGCGATCTTT	17	True	NA	13	True	AATAAA	-19	NA	166999396	167052718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_84158.nnic	chr6	+	1490	12	NIC	ENSG00000213066.13	novel	13956	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	129.028089708731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	13	True	NA	26	True	AATAAA	-18	NA	166999392	167040317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167032602_167032643_167033874_167033972_167039903
transcript_84161.known	chr6	+	1484	12	FSM	ENSG00000213066.13	ENST00000349556.4	1484	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	71.5203259555868	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	28	True	NA	26	True	AATAAA	-18	NA	166999407	167040317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_8417.known	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_7	38.6030872743028	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-11	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_84173.known	chr6	+	3451	11	FSM	ENSG00000213066.13	ENST00000622353.4	3451	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	160.580073483605	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTTGTGCTTTTATACT	-2	True	NA	23	True	AATAAA	-25	NA	166999316	167042418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167040047
transcript_84174.known	chr6	+	567	3	FSM	ENSG00000166984.12	ENST00000464222.2	567	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTTGAATTGGGTTT	50	False	NA	NA	False	AATAAA	-22	NA	167170670	167178760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167170723_167176996_167177135_167178383
transcript_84180.nnic	chr6	+	854	5	NNC	ENSG00000280707.3	novel	629	4	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	218.660124394001	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	NA	False	NA	21	True	AATAAA	-16	NA	167228097	167237511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478_167232561_167237240
transcript_84181.known	chr6	+	674	4	FSM	ENSG00000280707.3	ENST00000625787.3	980	4	25	281	7	-281	multi-exon	FALSE	canonical	3	71	junction_3	341.297849718134	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGCTATTTTGCCGA	13	True	NA	NA	False	NA	NA	NA	167228306	167233645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233242
transcript_84183.nnic	chr6	+	724	4	FSM	ENSG00000280707.3	ENST00000685238.1	555	4	-169	0	-89	0	multi-exon	FALSE	canonical	3	50	junction_3	350.738585780857	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGTTCTTTATATATT	NA	False	NA	13	True	ATTAAA	-18	NA	167228110	167233937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233680
transcript_84184.nic	chr6	+	806	4	FSM	ENSG00000280707.3	ENST00000691081.1	629	4	-183	6	-157	0	multi-exon	FALSE	canonical	3	322	junction_3	231.445217900239	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	NA	False	NA	21	True	AATAAA	-16	NA	167228042	167237511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167237240
transcript_84186.nnic	chr6	+	680	4	Fusion	ENSG00000280707.3_ENSG00000228648.1	novel	629	4	NA	NA	-21	1547	multi-exon	FALSE	canonical	3	41	junction_3	378.685738956313	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGGATGGATGGATAT	0	True	NA	23	True	AATAAA	-33	NA	167228258	167247463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr6_+_167228398_167231859_167231958_167245786_167245834_167247067
transcript_84191.nnic	chr6	+	600	4	NNC	ENSG00000280707.3	novel	629	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	245.810676922075	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	-2	True	NA	21	True	AATAAA	-16	NA	167228231	167237511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_+_167228381_167231859_167231958_167232478_167232561_167237240
transcript_84194.nic	chr6	+	1728	3	ISM	ENSG00000280707.3	ENST00000625787.3	980	4	-66	0	-10	0	intron_retention	FALSE	canonical	3	633	junction_2	127.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACAGTACAGCATGTT	NA	False	NA	2	True	ATTAAA	-7	NA	167228215	167233926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_167228398_167231859_167231958_167232478
transcript_84195.known	chr6	+	403	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	164	6	64	0	multi-exon	FALSE	canonical	3	195	junction_2	346.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	25	False	NA	21	True	AATAAA	-16	NA	167228363	167237511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167228398_167231859_167231958_167237240
transcript_84196.nnic	chr6	+	367	3	Fusion	ENSG00000280707.3_ENSG00000228648.1	novel	573	3	NA	NA	-21	0	multi-exon	FALSE	canonical	3	137	junction_2	375.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGTCTCTGGTTTTT	0	True	NA	11	True	AATGAA	-15	NA	167228258	167245916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr6_+_167228398_167231859_167231958_167245786
transcript_8420.nnic	chr1	-	1376	11	NIC	ENSG00000143156.14	novel	1472	12	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	115.481427078124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-1	True	NA	NA	False	AATAAA	-18	NA	169367812	169132530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169323116_169323284_169324392_169324501_169367707
transcript_84200.nic	chr6	+	2239	2	ISM	ENSG00000280707.3	ENST00000625787.3	980	4	-56	0	0	0	intron_retention	FALSE	canonical	3	888	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACAGTACAGCATGTT	-8	True	NA	2	True	ATTAAA	-7	NA	167228225	167233926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr6_+_167228398_167231859
transcript_84201.known	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	255.565168901311	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	6	True	NA	21	True	AATAAA	-16	NA	167228299	167237511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
transcript_84205.nnic	chr6	-	580	4	FSM	ENSG00000198221.11	ENST00000686435.1	577	4	-5	2	-1	0	multi-exon	FALSE	canonical	2	4	junction_3	15.8394724940223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTTCTATTCTCATT	-3	True	NA	-17	True	AATAAA	-13	NA	167826792	167824109	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_167824229_167824582_167824807_167825402_167825551_167826703
transcript_84209.nnic	chr6	-	663	3	NNC	ENSG00000198221.11	novel	620	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTGGTATATCAATAT	1	True	NA	-1	True	ATTAAA	-20	NA	167826788	167824377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_167824807_167825402_167825503_167826654
transcript_84211.nnic	chr6	-	738	3	NNC	ENSG00000198221.11	novel	967	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTGGTATATCAATAT	NA	False	NA	-1	True	ATTAAA	-20	NA	167826815	167824377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr6_-_167824807_167825402_167825551_167826654
transcript_84212.nnic	chr6	-	666	3	FSM	ENSG00000198221.11	ENST00000688535.1	967	3	28	273	-1	0	multi-exon	FALSE	canonical	2	4	junction_2	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTGGTATATCAATAT	-3	True	NA	-1	True	ATTAAA	-20	NA	167826792	167824377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_167824807_167825402_167825551_167826703
transcript_84213.known	chr6	-	2559	2	FSM	ENSG00000224417.2	ENST00000445442.2	2559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTTCACTCAATAT	NA	False	NA	2	True	AATAAA	-18	NA	168302114	168298068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_168300590_168302076
transcript_84216.known	chr6	-	2078	1	FSM	ENSG00000184786.6	ENST00000628156.1	2078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGAGTTCCTGTTGTTG	-25	True	NA	-5	True	AATAAA	-19	NA	169751587	169749509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_169749500_169751600
transcript_84218.known	chr6	+	2160	18	FSM	ENSG00000130023.16	ENST00000366773.8	2160	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	12.7832611138896	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCAGGGTCCAGGT	-18	True	NA	97	True	ATTAAA	-30	NA	169751621	169781600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_84220.known	chr6	+	1908	17	FSM	ENSG00000130023.16	ENST00000392095.8	1908	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.7394551519561	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGGATGCTTTTAAT	-15	True	NA	17	True	AGTAAA	-20	NA	169751624	169781520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_169751664_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_84222.known	chr6	+	5155	11	FSM	ENSG00000112584.14	ENST00000476287.4	5155	11	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_5	21.4720748880959	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTCACATTTCTCTG	-3	True	NA	NA	False	AATAAA	-29	NA	170306757	170407067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_170306843_170317369_170319125_170323078_170323260_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
transcript_84230.known	chr6	-	891	6	FSM	ENSG00000008018.9	ENST00000262193.7	891	6	0	0	0	0	multi-exon	TRUE	canonical	3	4339	junction_4	473.042492805879	3594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCTATAACTTGT	-27	True	NA	-15	True	ATTAAA	-17	NA	170553307	170535119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_170535406_170537233_170537341_170543600_170543731_170546102_170546185_170549005_170549114_170553129
transcript_84239.known	chr6	+	1861	8	FSM	ENSG00000112592.15	ENST00000230354.10	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	76.3234256707759	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTAAGAGTCATGTG	13	True	NA	31	True	AATAAA	-32	NA	170554378	170572870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_+_170554464_170556878_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
transcript_84244.known	chr6	-	3355	6	FSM	ENSG00000071994.11	ENST00000541970.6	3355	6	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	90.0653096369518	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGGTGATAGTGTTT	-19	True	NA	NA	False	AAAAAG	-20	NA	170584637	170575294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
transcript_84247.nnic	chr7	-	1755	3	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-714	156	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	4	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCCTCCTGAGTTGCT	NA	False	NA	NA	False	CATAAA	-20	NA	96397	70815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_71572_75531_75697_95563
transcript_84248.nnic	chr7	-	1444	3	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-431	-3660	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	4	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGTCCTGTGATGTTT	NA	False	NA	1	True	AATACA	-20	NA	96114	74631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75360_75531_75697_95563
transcript_84249.known	chr7	-	1201	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	27.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTTCAGGTATTA	NA	False	NA	-12	True	AATAAA	-17	NA	149466	144439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_145416_148531_148619_149328
transcript_84250.known	chr7	-	2091	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	149428	145935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_147840_148531_148619_149328
transcript_84252.nnic	chr7	-	2259	3	NNC	ENSG00000242474.3	novel	2091	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	27.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	149544	145935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_147892_148531_148619_149328
transcript_84253.known	chr7	-	746	2	FSM	ENSG00000242474.3	ENST00000497320.2	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTTCATTCAGTTGT	NA	False	NA	NA	False	TTTAAA	-9	NA	149466	148010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148619_149328
transcript_84258.known	chr7	-	2305	6	FSM	ENSG00000197461.13	ENST00000402802.7	2305	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.46969384566991	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGACGTGAGAAGCGT	1279	False	NA	-14	True	ATTAAA	-23	NA	519409	497257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938
transcript_8426.known	chr1	+	2300	8	FSM	ENSG00000117475.14	ENST00000329281.6	2300	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	39.8353755204735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGGAAGGAAGA	-4	True	NA	NA	False	NA	NA	NA	169367969	169396540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996_169387210_169395893
transcript_84260.known	chr7	-	2472	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	128.116392393792	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	3	True	NA	-42	True	ATTAAA	-15	NA	727281	549197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
transcript_84261.known	chr7	-	1917	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_10	71.0113371230256	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGACCCCAGTAGGGGG	-9	True	NA	NA	False	GGGGCT	-30	NA	727650	549741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_84265.nnic	chr7	-	1414	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	-64	819	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	146.448322322624	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGGCAGCTTCTCTAT	NA	False	NA	-18	True	ATTAAA	-17	NA	727714	578436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_84268.nnic	chr7	-	1167	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	-64	572	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	146.448322322624	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAATAAAAAACCTGCA	NA	False	NA	NA	False	NA	NA	NA	727714	578683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_84270.nic	chr7	-	1804	9	ISM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	29239	0	819	5prime_fragment	FALSE	canonical	3	74	junction_8	139.558623434742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGGCAGCTTCTCTAT	3	True	NA	-18	True	ATTAAA	-17	NA	727281	578436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
transcript_84271.nic	chr7	-	1788	9	ISM	ENSG00000188191.15	ENST00000403562.5	1917	11	5	28695	5	819	5prime_fragment	FALSE	canonical	3	304	junction_8	65.4387834162586	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGGCAGCTTCTCTAT	-4	True	NA	-18	True	ATTAAA	-17	NA	727645	578436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_84274.nic	chr7	-	1610	9	ISM	ENSG00000188191.15	ENST00000403562.5	1917	11	-64	28942	-64	572	5prime_fragment	FALSE	canonical	3	304	junction_8	65.4387834162586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAATAAAAAACCTGCA	NA	False	NA	NA	False	NA	NA	NA	727714	578683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_84277.nic	chr7	+	4008	20	NIC	ENSG00000164828.18	novel	4062	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	109.281993103258	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	-16	True	NA	12	True	AATAAA	-22	NA	816614	874902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_8428.known	chr1	+	2524	7	FSM	ENSG00000117475.14	ENST00000367808.8	2524	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	20.3278681179858	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	-22	True	NA	25	True	AATAAA	-18	NA	169368194	169388305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_84280.nic	chr7	+	3909	19	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_6	94.9152968717209	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	-16	True	NA	12	True	AATAAA	-22	NA	816614	874902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_84284.known	chr7	+	3812	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	109.800069960459	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	-16	True	NA	12	True	AATAAA	-22	NA	816614	874902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_84286.known	chr7	+	3717	17	FSM	ENSG00000164828.18	ENST00000452783.6	3717	17	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	119.7016473362	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	-16	True	NA	30	True	AATAAA	-40	NA	816614	874920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_84288.known	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_3	29.1161467230813	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	-3	True	NA	16	True	AATAAA	-16	NA	876553	896436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
transcript_8429.nic	chr1	+	2760	7	NIC	ENSG00000117475.14	novel	2524	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	37.4940736057788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	5	True	NA	25	True	AATAAA	-18	NA	169367978	169388305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_169368363_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_84295.nic	chr7	+	539	3	ISM	ENSG00000164828.18	ENST00000450538.5	570	5	0	3826	0	0	5prime_fragment	FALSE	canonical	3	297	junction_1	26.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	-16	True	NA	12	True	AATAAA	-21	NA	816614	839180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_816674_832504_832602_838797
transcript_84296.known	chr7	+	3868	18	FSM	ENSG00000164828.18	ENST00000425407.6	3868	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	94.6547176369686	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	15	True	NA	30	True	AATAAA	-40	NA	832504	874920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_84297.known	chr7	+	478	2	FSM	ENSG00000164828.18	ENST00000483996.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	17	True	NA	12	True	AATAAA	-21	NA	832506	839180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_832602_838797
transcript_84298.known	chr7	-	2118	11	FSM	ENSG00000105963.15	ENST00000611167.4	2118	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	8.78862901708793	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGTCCGAGGATGG	-3	True	NA	-3	True	AATAAA	-22	NA	945816	897900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_945761
transcript_84299.known	chr7	-	4839	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	14	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGCGTTTTCCAAG	-11	True	NA	-5	True	ATTAAA	-17	NA	975549	964851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_969457_973180_973293_975427
transcript_84303.known	chr7	-	714	2	FSM	ENSG00000240230.6	ENST00000466146.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAACCAGAACTCACCAAC	-11	True	NA	NA	False	AATAGA	-40	NA	975549	972700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_973293_975427
transcript_84306.nnic	chr7	-	1095	6	NNC	ENSG00000146540.15	novel	1294	5	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	443.846820423443	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGGGTCCTGCTCTGTG	-21	True	NA	-36	True	AATAAA	-17	NA	1138290	997005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_997434_997645_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
transcript_84312.known	chr7	-	1294	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	271.541318218793	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGCGTCCCCTGCCTGTG	12	True	NA	-16	True	AATAAA	-37	NA	1138257	996985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
transcript_84313.known	chr7	-	621	5	FSM	ENSG00000146540.15	ENST00000491163.1	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	461.130404549516	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGTGGGTTCAGCGC	9	True	NA	NA	False	NA	NA	NA	1138260	997632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
transcript_84316.known	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	455.621431551336	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	18	True	NA	-46	True	AATAAA	-7	NA	1028339	997015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
transcript_8432.nnic	chr1	+	2314	6	NIC	ENSG00000117475.14	novel	2524	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	45.1690159290636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	-32	True	NA	25	True	AATAAA	-18	NA	169368184	169388305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169386996
transcript_84321.known	chr7	-	853	5	FSM	ENSG00000178381.12	ENST00000397083.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	66.5934493775476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	21	True	NA	-3	True	AATAAA	-20	NA	1160153	1152905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1153242_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_84322.known	chr7	-	878	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	10.3077640640442	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	-22	True	NA	-4	True	AATAAA	-19	NA	1160196	1152906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_84323.nnic	chr7	-	783	3	NNC	ENSG00000157778.9	novel	774	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	146	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-21	True	NA	-3	True	ATTAAA	-21	NA	1570025	1567331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_1567851_1569123_1569361_1569998
transcript_84324.known	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	111	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-41	True	NA	-22	True	ATTAAA	-2	NA	1570045	1567350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1567851_1569123_1569361_1570008
transcript_84325.known	chr7	+	588	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_3	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGTAGTTGTAGCC	-1	True	NA	NA	False	AATAAA	-20	NA	1570141	1579485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
transcript_84327.known	chr7	-	2695	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_18	27.0724337041698	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-3	True	NA	-11	True	AATAAA	-16	NA	2232945	1815794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
transcript_84328.known	chr7	-	2762	19	FSM	ENSG00000002822.16	ENST00000399654.6	2762	19	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_18	52.6940856896357	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCACTCGCCCTGTGTA	9218	False	NA	-10	True	AATAAA	-17	NA	2232974	1815793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230765_2232871
transcript_84330.nic	chr7	-	2517	18	NIC	ENSG00000002822.16	novel	2762	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_17	59.0703058910506	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCACTCGCCCTGTGTA	-3	True	NA	-10	True	AATAAA	-17	NA	2232945	1815793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2232871
transcript_84337.known	chr7	-	2511	4	FSM	ENSG00000122687.19	ENST00000486040.1	2511	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	65.4539702556096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	3	True	NA	-22	True	CATAAA	-14	NA	2242189	2234294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2235565_2238014_2238938_2239417_2239708_2242161
transcript_84339.nnic	chr7	-	1707	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	NA	False	NA	-5	True	AATAAA	-29	NA	2242239	2234194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_84340.known	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	165.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	23	True	NA	-41	True	NA	NA	NA	2242169	2234230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2235565_2239417_2239708_2241974
transcript_84341.known	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	92.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-13	True	NA	-5	True	AATAAA	-29	NA	2242205	2234194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2235565_2239417_2239708_2242161
transcript_84345.nnic	chr7	-	1511	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	67	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGTGGTGTGTTTA	NA	False	NA	-18	True	CATAAA	-18	NA	2242220	2234290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_2235565_2239529_2239708_2242161
transcript_84347.nnic	chr7	-	1609	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGATGTGGTGTGTT	NA	False	NA	-20	True	CATAAA	-16	NA	2242239	2234292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_84353.nnic	chr7	+	716	5	NIC	ENSG00000106268.16	novel	698	4	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	117	junction_1	388.518017600214	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-3	True	NA	19	True	AATAAA	-15	NA	2242218	2251145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_2242257_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_84354.nnic	chr7	+	789	5	NIC	ENSG00000106268.16	novel	771	4	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_2	427.046250422598	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-3	True	NA	19	True	AATAAA	-15	NA	2242218	2251145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_2242257_2242924_2243049_2244562_2244727_2249856_2250003_2250828
transcript_84355.known	chr7	+	712	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	410.582817468047	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2	True	NA	19	True	AATAAA	-15	NA	2242258	2251145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_84356.known	chr7	+	783	5	FSM	ENSG00000106268.16	ENST00000397048.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	445.532827073382	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	4	True	NA	19	True	AATAAA	-15	NA	2242260	2251145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2242293_2242924_2243049_2244562_2244727_2249856_2250003_2250828
transcript_84358.known	chr7	+	658	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	297.694474251707	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	4	True	NA	19	True	AATAAA	-15	NA	2242225	2251145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
transcript_8436.nic	chr1	-	1885	6	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	24.5324275195098	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-8	True	NA	0	True	AATAAA	-23	NA	169427462	169394869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424931_169427287
transcript_84362.nnic	chr7	+	506	3	NIC	ENSG00000106268.16	novel	658	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	466	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-8	True	NA	19	True	AATAAA	-15	NA	2242213	2251145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_2242257_2249856_2250003_2250828
transcript_84363.known	chr7	+	714	3	FSM	ENSG00000106268.16	ENST00000397049.2	714	3	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	1.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	1562	False	NA	19	True	AATAAA	-15	NA	2244475	2251145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2244727_2249856_2250003_2250828
transcript_84364.known	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	19.3051806518354	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-33	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_84368.nic	chr7	-	474	2	ISM	ENSG00000106266.11	ENST00000447136.1	583	4	-220	62009	-220	-59011	5prime_fragment	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGTGGTGTGACCCTT	1054	False	NA	-3	True	ATTAAA	-16	NA	2354538	2337124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_2337282_2354221
transcript_84369.known	chr7	+	2966	19	FSM	ENSG00000106263.19	ENST00000397011.2	2966	19	0	0	0	0	multi-exon	FALSE	canonical	1	734	junction_11	440.498486565694	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	19	True	NA	46	True	AATAAA	-20	NA	2354881	2380745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
transcript_8437.known	chr1	-	1860	6	FSM	ENSG00000117477.13	ENST00000367806.8	1917	6	57	0	45	0	multi-exon	TRUE	canonical	0	0	junction_5	24.5324275195098	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-2	True	NA	0	True	AATAAA	-23	NA	169427417	169394869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424951_169427287
transcript_84370.known	chr7	+	15979	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGGGACTGAACAAAACC	-9	True	NA	NA	False	AGTAAA	-17	NA	2403587	2448483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2403646_2432562
transcript_84375.known	chr7	-	2779	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	0	0	0	multi-exon	TRUE	canonical	3	528	junction_13	96.0347570216795	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTCATTCATTCGC	-11	True	NA	0	True	NA	NA	NA	2555524	2537809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_84380.nic	chr7	-	1415	4	ISM	ENSG00000106009.16	ENST00000469750.5	5226	11	-57	6324	-57	-2024	5prime_fragment	FALSE	canonical	3	528	junction_3	128.761622992084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAAGAAGGAACGA	NA	False	NA	NA	False	NA	NA	NA	2555751	2544204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_2545057_2547323_2547479_2554304_2554448_2555486
transcript_84382.nic	chr7	-	692	2	ISM	ENSG00000106009.16	ENST00000340611.9	2779	14	-21	16005	-21	-11634	5prime_fragment	FALSE	canonical	3	528	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATTAGCTGTGCCTGG	-1	True	NA	NA	False	NA	NA	NA	2555545	2553814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_2554448_2555486
transcript_84383.known	chr7	+	2170	21	FSM	ENSG00000106012.18	ENST00000438376.6	2170	21	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	9.00263850212814	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCGTCACTGTCTCCAC	12	True	NA	NA	False	NA	NA	NA	2559051	2610162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_2559218_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_84385.known	chr7	-	4287	25	FSM	ENSG00000198286.10	ENST00000396946.9	4287	25	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_13	9.4537433796824	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGACCCTTTGTTTGT	-11	True	NA	-9	True	ATTAAA	-18	NA	3043867	2906141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928699_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
transcript_84386.known	chr7	+	5529	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_9	15.4958411759414	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTCCACACTGCCT	-29	True	NA	16	True	AATAAA	-17	NA	4775622	4794397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_84388.known	chr7	+	2667	16	FSM	ENSG00000242802.9	ENST00000647984.1	2667	16	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	37.1606721623218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGAAGAGCTGCAGTA	-37	True	NA	-23	True	NA	NA	NA	4775614	4791714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4775757_4781174_4781313_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_84393.nic	chr7	+	2351	7	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	109.554273713484	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	NA	False	NA	18	True	ATTAAA	-18	NA	4973996	4998167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
transcript_84394.nic	chr7	+	2299	7	NIC	ENSG00000196204.12	novel	576	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	109.554273713484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	NA	False	NA	18	True	ATTAAA	-18	NA	4973996	4998167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4995474_4995583_4996609
transcript_84397.known	chr7	+	807	7	FSM	ENSG00000196204.12	ENST00000406089.6	807	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.712698402262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCGAGGAGCTCAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	4973987	4995522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4986566_4986632_4989062_4989178_4995474
transcript_84398.known	chr7	+	2201	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.464003402149	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	-21	True	NA	16	True	ATTAAA	-16	NA	4974036	4998165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
transcript_84399.nnic	chr7	+	2236	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	124.469433998874	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	NA	False	NA	18	True	ATTAAA	-18	NA	4973996	4998167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4995474_4995583_4996609
transcript_84402.nic	chr7	+	2189	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	103.464003402149	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	NA	False	NA	16	True	ATTAAA	-16	NA	4973996	4998165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4996609
transcript_84404.nic	chr7	+	628	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-40	9045	9	-248	5prime_fragment	FALSE	canonical	0	0	junction_3	113.151171005872	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAGAAAAGAAATG	NA	False	NA	NA	False	ATTAAA	-38	NA	4973996	4989120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_84406.known	chr7	+	1360	5	FSM	ENSG00000196204.12	ENST00000403969.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.473143645385	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTTCACAGTGAACAA	-8	True	NA	NA	False	NA	NA	NA	4974049	4997452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4996609
transcript_8441.known	chr1	-	1652	4	FSM	ENSG00000117477.13	ENST00000491570.2	1652	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.1825107171668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAACTATCAATTCGTT	-20	True	NA	NA	False	AATAAA	-40	NA	169427474	169418785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169419160_169421362_169422314_169424810_169424951_169427287
transcript_84413.nnic	chr7	+	1622	14	NNC	ENSG00000157954.15	novel	4445	13	NA	NA	14	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.425918720743	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTAGTGGTAGTCTAAC	NA	False	NA	-53	True	ATTAAA	-11	NA	5190209	5231077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_5190316_5190398_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_84417.nnic	chr7	+	1568	13	NNC	ENSG00000157954.15	novel	4445	13	NA	NA	14	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.315717787771	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTAGTGGTAGTCTAAC	NA	False	NA	-53	True	ATTAAA	-11	NA	5190209	5231077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_5190316_5190398_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_8442.known	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-8	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169422314_169424810_169424931_169427287
transcript_84428.known	chr7	-	1845	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_4	14377.5667389629	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
transcript_8444.known	chr1	-	3612	6	FSM	ENSG00000117479.15	ENST00000236137.10	3612	6	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_4	23.1982757979984	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAAATTTATCTTCT	17	True	NA	4	True	AATAAA	-35	NA	169485944	169463908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
transcript_84442.known	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_5	1415.47594822378	15175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-1	True	NA	-4	True	AATAAA	-21	NA	5530601	5527147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_84451.known	chr7	-	1300	5	FSM	ENSG00000075624.17	ENST00000432588.6	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_4	1556.26738946108	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTATGACGAGTCCGGC	763	False	NA	NA	False	NA	NA	NA	5530627	5527797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_84458.known	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	236	junction_4	13567.2290349762	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	786	False	NA	-3	True	AATAAA	-22	NA	5530604	5527146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
transcript_84459.known	chr7	-	2245	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_4	1514.40307959935	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
transcript_84466.known	chr7	-	425	2	FSM	ENSG00000075624.17	ENST00000646584.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCGAGTAGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	5562716	5561851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5561950_5562389
transcript_84468.known	chr7	+	2784	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_2	70.1248885917119	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	1	True	NA	32	True	AATAAA	-22	NA	5592815	5606655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_84469.nnic	chr7	+	1871	5	NNC	ENSG00000075618.18	novel	2215	4	NA	NA	-148	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	526.030892628941	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCGGCCTGTGTGTGTCT	944	False	NA	31	True	AATAAA	-21	NA	5594398	5606654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_5594440_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_84470.known	chr7	-	5639	17	FSM	ENSG00000011275.19	ENST00000425013.6	5639	17	0	0	0	0	multi-exon	FALSE	canonical	2	133	junction_1	42.5286668025227	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	NA	False	NA	-8	True	AATAAA	-19	NA	5781696	5620046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
transcript_84471.known	chr7	-	5777	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_14	49.5334088646239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	22	False	5781685	-8	True	AATAAA	-19	NA	5781663	5620046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_84476.nic	chr7	-	1662	8	ISM	ENSG00000011275.19	ENST00000389902.8	5777	17	-23	105334	10	4149	5prime_fragment	FALSE	canonical	3	84	junction_5	65.1168494449221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAGAAAACAAATG	-1	True	NA	15	True	ATTAAA	-38	NA	5781686	5725380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_84479.nnic	chr7	+	1152	6	FSM	ENSG00000235944.9	ENST00000690822.1	1137	6	-16	1	-15	-1	multi-exon	TRUE	canonical	2	8	junction_3	4.1182520563948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTCTGTGGACTG	-11	True	NA	14	True	AGTAAA	-25	NA	5823144	5854437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_5823527_5831180_5831284_5833526_5833569_5839948_5840076_5840689_5840857_5854106
transcript_84481.nnic	chr7	+	872	4	NIC	ENSG00000235944.9	novel	1068	5	NA	NA	64	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	7.25718035235908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTCTGTGGACTG	68	False	NA	14	True	AGTAAA	-25	NA	5823279	5854437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_5823527_5839948_5840076_5840689_5840857_5854106
transcript_84485.nnic	chr7	+	1742	15	NNC	ENSG00000122674.12	novel	2867	4	NA	NA	212	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	503.955415909473	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTGGTTTGGTGTTG	234	False	NA	16	True	AATAAA	-16	NA	5899011	5925970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_5899142_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_84496.known	chr7	-	2600	15	FSM	ENSG00000122512.16	ENST00000643595.1	2600	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	25.8993341652654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATGTTTTGAAAGACA	-1	True	NA	-125	True	NA	NA	NA	6009041	5973360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999227_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006032_6008996
transcript_84497.known	chr7	-	2765	15	FSM	ENSG00000122512.16	ENST00000642456.1	2765	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_14	24.5083284469852	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTGATCTTGAGAA	12	True	NA	-38	True	AATACA	-12	NA	6009075	5973273	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006027_6008996
transcript_84498.nnic	chr7	-	2771	15	NNC	ENSG00000122512.16	novel	5093	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	24.8127682733659	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGCATTGCTTGCAA	-10	True	NA	-6	True	AATACA	-44	NA	6009097	5973241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003742_6003793_6003971_6004059_6005891_6006032_6008996
transcript_845.nic	chr1	+	2046	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	490	junction_1	99.2622788374315	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	-30	True	NA	25	True	AATAAA	-16	NA	12019469	12032039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029895_12030027_12030125_12031265_12031404_12031721
transcript_8450.known	chr1	+	4011	25	FSM	ENSG00000000460.17	ENST00000359326.9	4011	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	57.8061895955403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCATTGCTACATTTTT	-21	True	NA	NA	False	AATAAA	-27	NA	169795039	169854080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169795116_169795828_169795984_169798856_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_84501.known	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_8	41.9160969518092	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	11	False	6059186	NA	False	AATAAA	-25	NA	6059175	6022246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_84512.known	chr7	+	1198	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_3	30.5068298363935	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	-9	True	NA	28	True	AATAAA	-17	NA	6009271	6023834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
transcript_84513.nnic	chr7	+	1105	4	NIC	ENSG00000106305.10	novel	1198	4	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_1	253.536322184153	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	-36	True	NA	28	True	AATAAA	-17	NA	6009244	6023834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_6009379_6015145_6015353_6017813_6018046_6023302
transcript_84514.known	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	35	True	NA	-59	True	TTTAAA	-36	NA	6009315	6023747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6009499_6017813_6018046_6023302
transcript_84516.known	chr7	+	5155	18	FSM	ENSG00000106346.12	ENST00000306177.10	5090	18	-65	0	-65	0	multi-exon	FALSE	canonical	3	101	junction_14	19.5959179422654	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCGTCTTTTTACTG	-50	True	NA	23	True	TATAAA	-16	NA	6104883	6161564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753_6157056_6159449_6159494_6160554
transcript_84518.known	chr7	-	207	2	FSM	ENSG00000286075.2	ENST00000578372.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTCCCAGACTGACGA	185	False	NA	NA	False	NA	NA	NA	6348758	6331214	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6331236_6348572
transcript_84519.known	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	2693	junction_1	50.6201540890582	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	1	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
transcript_8452.nic	chr1	+	3228	24	NIC	ENSG00000000460.17	novel	4011	25	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	47.8065968191932	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAGTGAAAATAATCT	NA	False	NA	9	True	TATAAA	-18	NA	169794708	169853085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_84523.known	chr7	-	2839	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_11	15.5169426822452	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGTGTACAGCTGC	1	True	NA	-14	True	AATAAA	-16	NA	6447954	6409128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
transcript_84526.nnic	chr7	-	2602	14	NNC	ENSG00000164535.15	novel	2839	15	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	39.3219152350376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTGTGTGTACAGCTG	NA	False	NA	-15	True	AATAAA	-15	NA	6448012	6409129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6445711_6445849_6445952_6446105_6447747
transcript_84529.known	chr7	-	2044	13	FSM	ENSG00000164535.15	ENST00000425398.6	2044	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	39.7037641652387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCACCCAGAAGACCGT	21	True	NA	NA	False	NA	NA	NA	6447934	6409516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6432836_6432960_6436361_6436534_6445952_6446105_6447747
transcript_84533.known	chr7	-	2786	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_2	52.7019923722054	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	9	True	NA	-11	True	AATAAA	-18	NA	6484152	6461088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
transcript_84538.known	chr7	+	1348	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	118.47810440959	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	-19	True	NA	19	True	AAGAAA	-31	NA	6577433	6588931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_84541.known	chr7	+	1706	8	FSM	ENSG00000136247.15	ENST00000335965.11	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	78.260944986654	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	1	True	NA	NA	False	NA	NA	NA	6577453	6589374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_84544.nic	chr7	+	1386	8	NIC	ENSG00000136247.15	novel	1706	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	136.559622920704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGCTTGTTTGTTTTGA	NA	False	NA	20	True	NA	NA	NA	6577401	6588976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_84545.known	chr7	+	1552	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	74.6223143296854	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	-19	True	NA	22	True	NA	NA	NA	6577433	6588978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_84547.known	chr7	+	1485	8	FSM	ENSG00000136247.15	ENST00000396709.5	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	135.010506015991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTTTGAGCTGTAGT	15	True	NA	7	True	AAGAAA	-19	NA	6577467	6588919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577721_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_84548.known	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	111.987061934923	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	52	False	NA	NA	False	NA	NA	NA	6577504	6589374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_84555.known	chr7	+	1604	6	FSM	ENSG00000136247.15	ENST00000474097.5	1604	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	147.960805620948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGTACAGTTGAAAAA	15	True	NA	NA	False	ACTAAA	-36	NA	6577467	6584320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_84557.known	chr7	+	532	3	FSM	ENSG00000228010.6	ENST00000430844.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACCTTTGGAAGCTAAT	-12	True	NA	NA	False	NA	NA	NA	6663973	6673601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_6664044_6665043_6665109_6673204
transcript_84561.known	chr7	-	5075	5	FSM	ENSG00000164631.19	ENST00000405858.6	5075	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	6.72681202353685	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGGCATTTTCTTCTT	-18	True	NA	0	True	AGTAAA	-19	NA	6706947	6688432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
transcript_84563.known	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1995	junction_1	181	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	8	True	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_6824549_6824639_6824738_6826077
transcript_84564.nnic	chr7	+	2409	7	NNC	ENSG00000106392.11	novel	1777	3	NA	NA	-165771	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.037433683958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	NA	False	NA	28	True	AATAAA	-18	NA	6991162	7244350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_6991313_7094957_7095132_7097989_7098119_7103122_7103347_7234302_7234540_7238254_7238923_7243523
transcript_84566.nnic	chr7	+	2116	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	203.728219694769	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	-15	True	NA	28	True	AATAAA	-18	NA	7182634	7244350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_7182821_7215041_7215240_7234302_7234540_7238254_7238923_7243523
transcript_84568.known	chr7	+	6275	4	FSM	ENSG00000106392.11	ENST00000436587.7	6275	4	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	43.4383343245213	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	-1	True	NA	16	True	AATAAA	-15	NA	7182543	7248616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523
transcript_84571.known	chr7	+	1777	3	FSM	ENSG00000106392.11	ENST00000223122.4	1777	3	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	NA	False	NA	28	True	AATAAA	-18	NA	7234257	7244350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7234540_7238254_7238923_7243523
transcript_84572.known	chr7	+	4877	13	FSM	ENSG00000164654.16	ENST00000340080.9	4877	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	96.7750470019117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTATGTCTCTGG	-32	True	NA	NA	False	NA	NA	NA	7566883	7608932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7567073_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_84575.known	chr7	+	3095	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	97.4089954608619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	-41	True	NA	9	True	AATAAA	-14	NA	7566874	7607223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_84576.nic	chr7	+	2855	11	NIC	ENSG00000164654.16	novel	3095	12	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	79.1646385705133	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	-29	True	NA	9	True	AATAAA	-14	NA	7567016	7607223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_84577.nic	chr7	+	3113	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	29	258	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	79.1646385705133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTCTGTGATTCAG	-29	True	NA	6	True	AATAAA	-24	NA	7567016	7607481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_8458.known	chr1	+	782	6	FSM	ENSG00000000460.17	ENST00000496973.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	103.946909525969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTTAAATCTTACCAAA	-18	True	NA	NA	False	ATTAAA	-2	NA	169795042	169804347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804111
transcript_84580.nnic	chr7	-	994	4	NNC	ENSG00000272894.5	novel	1578	3	NA	NA	190	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	12.3648246606609	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTACCATGCACGATT	201	False	NA	-14	True	ATTAAA	-22	NA	7566806	7552461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_7552923_7555155_7555190_7565913_7566055_7566448
transcript_84581.known	chr7	+	559	5	FSM	ENSG00000219545.12	ENST00000463725.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.9408773137088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGACCACTTACTCTCC	9	True	NA	NA	False	NA	NA	NA	7640751	7877443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7640822_7673308_7673454_7676101_7676209_7801669_7801744_7877280
transcript_84585.nic	chr7	+	2434	5	NIC	ENSG00000219545.12	novel	2232	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	63.0039681289996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTGATTGCATTATTT	9	True	NA	34	True	AATAAA	-30	NA	7640751	7879223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7640822_7641503_7641706_7673308_7673454_7801669_7801744_7877280
transcript_84588.known	chr7	+	2232	4	FSM	ENSG00000219545.12	ENST00000682710.1	2232	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	28.7556757682529	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTGATTGCATTATTT	9	True	NA	34	True	AATAAA	-30	NA	7640751	7879223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7877280
transcript_84589.known	chr7	+	569	4	FSM	ENSG00000219545.12	ENST00000482067.3	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	44.2141254452566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	51	False	NA	NA	False	AATAAA	-18	NA	7640793	7968020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7967698
transcript_8459.nnic	chr1	-	2190	2	NNC	ENSG00000171806.12	novel	1462	2	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	13	True	NA	-4	True	AATAAA	-16	NA	169794897	169792528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_169793898_169794076
transcript_84591.nnic	chr7	+	651	4	NIC	ENSG00000219545.12	novel	569	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	58.0191539254255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	-41	True	NA	NA	False	AATAAA	-18	NA	7640701	7968020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_7640822_7673318_7673454_7801669_7801744_7967698
transcript_84592.known	chr7	+	2157	4	FSM	ENSG00000219545.12	ENST00000636849.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.1682057859982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATTTTTGATTA	33	True	NA	-4	True	AATAAA	-8	NA	7640775	7879185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7640822_7673321_7673454_7801669_7801744_7877280
transcript_84593.nic	chr7	+	941	3	ISM	ENSG00000219545.12	ENST00000682710.1	2232	4	-3	76831	-3	63570	5prime_fragment	FALSE	canonical	3	73	junction_1	30.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTCAAAATCCCGTTG	6	True	NA	NA	False	NA	NA	NA	7640748	7802392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_7640822_7673308_7673454_7801669
transcript_8460.known	chr1	-	1462	2	FSM	ENSG00000171806.12	ENST00000310392.5	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	3	True	NA	-4	True	AATAAA	-16	NA	169794907	169792528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169793898_169794814
transcript_84600.known	chr7	+	4741	8	FSM	ENSG00000106415.13	ENST00000223145.10	4741	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	31.4525882261293	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCACACATGTTTTTGG	-4	True	NA	14	True	AATAAA	-20	NA	7968795	8089080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_7969808_8003907_8004060_8022482_8022570_8055432_8055550_8060095_8060249_8070920_8071132_8084896_8085018_8086192
transcript_84603.known	chr7	-	1956	15	FSM	ENSG00000003147.19	ENST00000455539.5	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	132.887266170255	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	14	True	NA	-12	True	AATAAA	-37	NA	8262153	8113771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8227637_8227852_8228600_8228674_8232589_8232756_8235909_8236006_8262093
transcript_84607.nic	chr7	-	1764	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	95.4833855865874	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	3	True	NA	-12	True	AATAAA	-37	NA	8262586	8113771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262439
transcript_84608.known	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	104.561354826135	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	474	False	NA	-34	True	NA	NA	NA	8262206	8113254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
transcript_84609.known	chr7	-	2440	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	39.6841076801138	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGTTTATGGAGTC	68	False	NA	34	True	ATTAAA	-22	NA	8262612	8113186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_8461.known	chr1	-	850	2	FSM	ENSG00000171806.12	ENST00000454472.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGGGAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	169794963	169793141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169793898_169794869
transcript_84612.nnic	chr7	-	1631	12	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	106.307288881908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	67	False	NA	-12	True	AATAAA	-37	NA	8262613	8113771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_84615.known	chr7	-	2304	15	FSM	ENSG00000003147.19	ENST00000650486.1	2304	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	132.07475078878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGACATTGTTTTT	407	False	NA	-25	True	NA	NA	NA	8262273	8113245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8113512_8113592_8114045_8127872_8128143_8138842_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262093
transcript_84621.nic	chr7	-	1788	7	ISM	ENSG00000003147.19	ENST00000407906.5	1615	8	-1	1140	-1	-581	5prime_fragment	FALSE	canonical	3	293	junction_5	32.170120712653	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGACTAGGTTCCTTGT	67	False	NA	NA	False	NA	NA	NA	8262613	8157696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_84625.known	chr7	-	539	4	FSM	ENSG00000003147.19	ENST00000446305.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	117.11627650426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCGAAAGCAATTGTAC	-7	True	NA	NA	False	NA	NA	NA	8262687	8228641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_8228674_8232589_8232753_8235909_8236006_8262439
transcript_84626.known	chr7	-	2218	2	FSM	ENSG00000278254.4	ENST00000614289.1	2218	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	AATAGA	-38	NA	9189785	9082556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_9084549_9189559
transcript_84628.known	chr7	-	2035	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	11218	junction_2	589.835570307522	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTTCTAGAATTGAG	5	True	NA	NA	False	AATAAA	-23	NA	10940153	10931942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
transcript_84629.nnic	chr7	+	3214	18	NNC	ENSG00000106443.17	novel	9869	16	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	48.2865581244069	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	NA	False	NA	12	True	AATAAA	-17	NA	10973299	11169618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_10973540_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_84631.known	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	23.9883189566668	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	-24	True	NA	12	True	AATAAA	-17	NA	10973871	11169618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_84634.known	chr7	+	2627	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	44.2658428559764	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	-7	True	NA	17	True	AATAAA	-22	NA	10973888	11169623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_84636.nic	chr7	+	533	3	NIC	ENSG00000106443.17	novel	9869	16	NA	NA	-3	-32597	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	73	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAAGGAGAAAGA	-2	True	NA	-23	True	AAAAAG	-19	NA	10973332	10982622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_10973504_10974834_10974946_10982371
transcript_84638.nnic	chr7	+	664	3	NNC	ENSG00000106443.17	novel	9869	16	NA	NA	-3	-32597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAAGGAGAAAGA	-2	True	NA	-23	True	AAAAAG	-19	NA	10973332	10982622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_10973635_10974834_10974946_10982371
transcript_8464.known	chr1	-	6308	13	FSM	ENSG00000000457.14	ENST00000367771.11	6308	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	8.18874566435883	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGATAAATCAGTTTTAT	25	True	NA	NA	False	ATTAAA	-16	NA	169893896	169849630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_84640.nic	chr7	+	551	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	229	80450	229	-32597	5prime_fragment	FALSE	canonical	3	148	junction_2	16.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAAGGAGAAAGA	195	False	NA	-23	True	AAAAAG	-19	NA	10974135	10982622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_84641.known	chr7	+	12351	8	FSM	ENSG00000106460.19	ENST00000396668.8	12351	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	23.2071417579035	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTATTTATATCAG	10	True	NA	NA	False	AATAAA	-18	NA	12211293	12243367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
transcript_84646.known	chr7	-	5220	29	FSM	ENSG00000146530.15	ENST00000275358.8	5220	29	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_19	16.3888884084707	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	-5	True	NA	0	True	AATAAA	-23	NA	12403865	12330884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372976_12373248_12374688_12374763_12375009_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
transcript_8465.nic	chr1	-	3018	13	NIC	ENSG00000000457.14	novel	3090	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	11.8001294719827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTATATCTGTTAGA	-39	True	NA	0	True	AATAAA	-32	NA	169893960	169853073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869129_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_84653.known	chr7	+	9682	16	FSM	ENSG00000006747.15	ENST00000297029.10	9682	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	3.04338992280355	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	-1	True	NA	NA	False	AATAAA	-22	NA	12570719	12660182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12570986_12578063_12578219_12581059_12581222_12604513_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644137_12644316_12644583_12644706_12649466_12649545_12651840_12651902_12652587
transcript_84654.known	chr7	+	1144	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	24	True	NA	13	True	AATAAA	-14	NA	12686907	12689176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12687044_12688168
transcript_84660.known	chr7	+	840	2	FSM	ENSG00000122644.13	ENST00000404894.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGAGTGTCTACAGCG	2	True	NA	NA	False	NA	NA	NA	12687634	12688914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12687729_12688168
transcript_84662.known	chr7	+	1296	3	FSM	ENSG00000122644.13	ENST00000396662.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	17.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGTTTTGTGCTTAC	-28	True	NA	16	True	AATAAA	-17	NA	12686855	12689179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_12687044_12687634_12687729_12688165
transcript_84663.nnic	chr7	-	2681	2	Antisense	novelGene_ENSG00000229618.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	13806685	13735918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_-_13738176_13806261
transcript_84665.known	chr7	-	6459	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	35	junction_13	50.5300894599287	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	6	True	NA	-1	True	AATAAA	-18	NA	13989666	13891228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_84666.known	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	1	50	junction_4	41.3671736471753	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	1490	False	NA	-11	True	TTTAAA	-6	NA	13989947	13894380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_84669.nic	chr7	-	2013	13	ISM	ENSG00000006468.14	ENST00000430479.6	6459	14	-48	9144	-38	0	5prime_fragment	FALSE	non_canonical	1	35	junction_12	52.4173953314483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTTGTACTTTTTTC	1723	False	NA	NA	False	AATAAA	-11	NA	13989714	13900372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_84670.known	chr7	-	4181	12	FSM	ENSG00000006468.14	ENST00000405358.8	4181	12	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_11	54.1056511614388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	4	True	NA	-6	True	AATAAA	-24	NA	13988873	13893267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988679
transcript_84673.known	chr7	-	3363	10	FSM	ENSG00000006468.14	ENST00000403527.5	3363	10	0	0	0	0	multi-exon	FALSE	non_canonical	1	9	junction_9	56.1901533485479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTAAACACAAAGTCAAAA	4923	False	NA	NA	False	AAAAAG	-17	NA	13986514	13894154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986115
transcript_84675.known	chr7	-	6231	9	FSM	ENSG00000006468.14	ENST00000420159.6	6231	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	61.7756778594942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTGGACTGTCGTGA	4923	False	NA	-5	True	AATAAA	-14	NA	13986514	13891232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13986115
transcript_84678.known	chr7	-	1758	2	FSM	ENSG00000171243.8	ENST00000307068.5	1758	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATTTTTTTTTCTAAG	-2	True	NA	62	True	AATAAA	-14	NA	16465738	16461480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_16462964_16465463
transcript_84679.known	chr7	-	2489	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	9.31081940672739	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCATCTTGTTTTATAA	7	True	NA	-18	True	AATAAA	-20	NA	16645754	16599778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_84685.known	chr7	+	1804	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	59.9545282238586	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	13	True	NA	17	True	AATAAA	-15	NA	16646180	16706517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84689.known	chr7	+	1784	12	FSM	ENSG00000136261.16	ENST00000436868.5	1784	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	161.501528790451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCTGGGCTTATA	6	True	NA	9	True	AATAAA	-7	NA	16646173	16706509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685923_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_8469.known	chr1	-	3090	14	FSM	ENSG00000000457.14	ENST00000367772.8	3090	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.1169014701814	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTATATCTGTTAGA	-38	True	NA	0	True	AATAAA	-32	NA	169893959	169853073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169853773_169854269_169854965_169855795_169855958_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_84690.known	chr7	+	1862	12	FSM	ENSG00000136261.16	ENST00000433922.6	1862	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	144.624335252085	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGGGCTTATATTG	NA	False	NA	12	True	AATAAA	-10	NA	16646133	16706512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84699.known	chr7	+	1721	11	FSM	ENSG00000136261.16	ENST00000630952.2	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	166.846066780131	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	NA	False	NA	23	True	AATAAA	-21	NA	16646133	16706523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_8470.known	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_6	9.10298115608166	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-45	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
transcript_84702.known	chr7	+	1711	11	FSM	ENSG00000136261.16	ENST00000437745.5	1711	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	208.983635722991	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	-8	True	NA	23	True	AATAAA	-21	NA	16646159	16706523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84704.known	chr7	+	1689	11	FSM	ENSG00000136261.16	ENST00000405202.5	1689	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	167.06708233521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	27	True	NA	-19	True	NA	NA	NA	16646194	16706481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16646289_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_84710.known	chr7	+	1873	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_5	27.9814224084481	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	-12	True	NA	20	True	ATTAAA	-30	NA	16753754	16784536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
transcript_84711.known	chr7	-	6357	26	FSM	ENSG00000071189.21	ENST00000428135.7	6357	26	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_19	16.9802709047883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGAGTTCATTTAA	-2	True	NA	-24	True	AATAAA	-14	NA	17940494	17790760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_84718.nic	chr7	-	2128	19	ISM	ENSG00000071189.21	ENST00000428135.7	6357	26	-14	25459	-7	0	5prime_fragment	FALSE	canonical	3	122	junction_12	12.7565040297775	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAGAGAAAAAAGGAT	-16	True	NA	NA	False	AAAAAG	-29	NA	17940508	17816219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_84720.known	chr7	-	4146	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56.687211961782	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATCATTACTTTTC	8	True	NA	NA	False	AATAAA	-28	NA	17940484	17879426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_84721.known	chr7	+	2420	1	FSM	ENSG00000279048.1	ENST00000625121.1	2420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTTGGTGTTGAAAG	711	False	NA	NA	False	ATTAAA	-14	NA	17940502	17942922	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_17940500_17942900
transcript_84722.known	chr7	-	3893	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	50.3940031705714	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGCCTCTGATGTGA	4	True	NA	-3	True	AATAAA	-21	NA	19709037	19695460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
transcript_84729.known	chr7	-	4274	5	FSM	ENSG00000173452.14	ENST00000405844.6	4274	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTGGCTTTCTT	-16	True	NA	NA	False	AATAAA	-20	NA	19773617	19719314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_19722135_19724279_19724354_19725513_19725769_19729381_19729439_19772549
transcript_84791.known	chr7	-	566	4	ISM	ENSG00000243004.7	ENST00000457921.6	955	7	154879	0	121	0	3prime_fragment	FALSE	canonical	3	224	junction_1	67.3102270584988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	NA	False	NA	-1	True	AATAAA	-14	NA	19968237	19918980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136
transcript_84792.known	chr7	-	743	6	FSM	ENSG00000243004.7	ENST00000415499.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	203.355255648828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACAGTATCACAAAC	248	False	NA	-33	True	TATAAA	-12	NA	20125162	19931070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_84793.known	chr7	+	483	1	FSM	ENSG00000213860.4	ENST00000396599.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	43	False	NA	NA	False	NA	NA	NA	20002764	20003247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20002800_20003200
transcript_84794.nnic	chr7	+	1044	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24908	5439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5973853695808	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	NA	False	NA	7	True	AATAAA	-20	NA	20121044	20135914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_20121314_20128961_20129003_20130211_20130514_20135482
transcript_848.nic	chr1	+	1397	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	173.844578575232	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	0	True	NA	25	True	AATAAA	-16	NA	12019439	12032039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_8480.known	chr1	+	2540	5	FSM	ENSG00000120370.14	ENST00000367763.8	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	17.2536228079786	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATAGTGTCTTTCATTTA	3	True	NA	NA	False	AATAAA	-14	NA	170532165	170553834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_170532285_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_84803.known	chr7	-	304	4	FSM	ENSG00000183742.13	ENST00000471019.1	304	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTACTTGAAAAGAAA	19	True	NA	NA	False	TTTAAA	-4	NA	20217357	20164368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_20164400_20170713_20170782_20198524_20198671_20217298
transcript_84804.nnic	chr7	+	903	5	FSM	ENSG00000233834.7	ENST00000688687.1	888	5	-17	2	-14	0	multi-exon	FALSE	canonical	2	4	junction_3	14.4287040305081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	9476	False	NA	NA	False	ATTAAA	-31	NA	20217521	20221700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219491_20219757_20221342
transcript_84805.known	chr7	+	740	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	50	8	9	-5	multi-exon	FALSE	canonical	3	17	junction_1	11.1579568022107	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAATATATGTGTATG	15	False	NA	NA	False	ATTAAA	-23	NA	20217585	20221692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
transcript_84807.nnic	chr7	+	808	4	FSM	ENSG00000233834.7	ENST00000685385.1	817	4	7	2	7	0	multi-exon	FALSE	canonical	2	4	junction_2	16.3367343397905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	9500	False	NA	NA	False	ATTAAA	-31	NA	20217545	20221700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20218255_20218364_20219491_20219757_20221342
transcript_84808.known	chr7	+	667	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	41	19	0	-16	multi-exon	FALSE	canonical	3	17	junction_2	11.5758369027902	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	6	True	NA	NA	False	ATTAAA	-12	NA	20217576	20221681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
transcript_84811.known	chr7	-	666	4	FSM	ENSG00000271133.6	ENST00000603156.2	924	4	30	228	30	-228	multi-exon	FALSE	canonical	3	8	junction_2	6.64997911442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAACTCTCTGAAAG	8	True	NA	60	True	NA	NA	NA	20331747	20328528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_20328857_20329366_20329514_20329689_20329783_20331649
transcript_84813.known	chr7	-	737	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	100	3	96	2	multi-exon	FALSE	canonical	3	13	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTGATTAATTTGT	122	False	NA	NA	False	AATAAA	-20	NA	20331681	20328298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_20328857_20329366_20329514_20331649
transcript_84816.known	chr7	+	6077	6	FSM	ENSG00000105866.15	ENST00000222584.8	6077	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	15.564061166675	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCATGAACACTGGAGA	0	True	NA	7	True	AATAAA	-21	NA	21428082	21514822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_21428259_21428676_21428793_21429288_21430844_21477078_21477308_21481923_21482124_21511021
transcript_84817.nic	chr7	+	2131	7	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-14	331055	-14	68	5prime_fragment	FALSE	canonical	3	27	junction_6	5.01386965216377	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTGTGTAAAAGTTT	-19	True	NA	29	True	AATAAA	-14	NA	21543024	21570784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185_21564398_21570068
transcript_84819.nic	chr7	+	1929	6	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-14	336928	-14	3465	5prime_fragment	FALSE	canonical	3	28	junction_1	4.58693797647189	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGACCACCTT	-19	True	NA	NA	False	NA	NA	NA	21543024	21564911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185
transcript_8482.nic	chr1	+	1500	7	ISM	ENSG00000076258.10	ENST00000367749.4	2303	10	-53	8937	-53	0	5prime_fragment	TRUE	canonical	3	12	junction_3	2.68741924943285	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGCTGTTACAAATA	NA	False	NA	2	True	AATAAA	-15	NA	171314129	171333147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708
transcript_84820.nic	chr7	+	1442	6	NIC	ENSG00000105877.19	novel	14343	82	NA	NA	-14	-409	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	12.8467894822014	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTTATTTATTCA	-19	True	NA	14	True	AATAAA	-16	NA	21543024	21570307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21570068
transcript_84827.known	chr7	-	2915	11	FSM	ENSG00000164649.20	ENST00000356195.9	2915	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	414.930307401135	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCTTGTCAGTGGTA	22	True	NA	-3	True	AATAAA	-25	NA	21945878	21900899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21940261_21940316_21945780
transcript_84833.known	chr7	-	2883	10	FSM	ENSG00000164649.20	ENST00000406877.8	2883	10	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_8	154.38631999782	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	1	True	NA	-2	True	AATAAA	-26	NA	21945899	21900898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21945780
transcript_84836.known	chr7	-	1193	5	FSM	ENSG00000105889.16	ENST00000406890.6	1193	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	24.1078306780183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	0	True	NA	-36	True	ATTAAA	-18	NA	22500177	22419443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22419837_22492564_22492730_22493323_22493780_22494771_22494887_22500113
transcript_84837.known	chr7	-	1261	5	FSM	ENSG00000105889.16	ENST00000678116.1	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	10.7354552767919	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-11	True	NA	-36	True	ATTAAA	-18	NA	22500188	22419443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_84839.nnic	chr7	-	2208	5	NNC	ENSG00000105889.16	novel	1004	5	NA	NA	-75	8579	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	25.406692031825	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACCAGCCATTTCGTGTC	NA	False	NA	-9	True	AATAAA	-21	NA	22500280	22483812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_22485061_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_84842.known	chr7	-	514	4	FSM	ENSG00000196683.12	ENST00000372879.8	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2553.83559028811	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	15	True	NA	-4	True	AATAAA	-16	NA	22822791	22812972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22813186_22817411_22817549_22817999_22818049_22822676
transcript_84845.known	chr7	-	434	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	5429	junction_2	46	3094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGAGTCTTTTTTG	-7	True	NA	-5	True	AATAAA	-15	NA	22822849	22812973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22813186_22817999_22818049_22822676
transcript_84847.known	chr7	-	731	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGGCGGCTCTGTTGC	-7	True	NA	NA	False	AATAAA	-1	NA	22822849	22812627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22813186_22822676
transcript_84848.known	chr7	-	520	2	FSM	ENSG00000196683.12	ENST00000496129.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	5429	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTTCACCTAAAATTT	-4	True	NA	NA	False	AATACA	-36	NA	22822810	22817662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22818049_22822676
transcript_84849.known	chr7	+	1063	6	FSM	ENSG00000228649.10	ENST00000661147.1	1063	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	6.8585712797929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	NA	False	NA	NA	False	AATATA	-33	NA	22854199	22861436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546_22860639_22860885
transcript_84850.known	chr7	+	1400	5	FSM	ENSG00000228649.10	ENST00000656687.2	1408	5	8	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.72216482987438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGATAAGCAGCTATTA	-5	True	NA	NA	False	AATAAA	-25	NA	22854253	22861580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546
transcript_84851.known	chr7	+	747	5	FSM	ENSG00000228649.10	ENST00000663057.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.66077672302228	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	-3	True	NA	NA	False	AATATA	-33	NA	22854255	22861436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546_22860639_22860885
transcript_84852.known	chr7	+	1938	4	FSM	ENSG00000228649.10	ENST00000415611.8	1938	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.54896090146283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCATGGTTTATAACAA	NA	False	NA	NA	False	NA	NA	NA	22854125	22860274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570
transcript_84853.known	chr7	+	1238	4	FSM	ENSG00000228649.10	ENST00000422542.4	1238	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGATAAGCAGCTATT	NA	False	NA	NA	False	AATAAA	-24	NA	22854154	22861579	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546
transcript_84854.known	chr7	+	1743	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	14	True	AATAAA	-20	NA	22854152	22858552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_22854281_22856521_22856557_22856972
transcript_84856.known	chr7	-	3130	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	58.6364341084848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAAATGTCTTTCTT	3	True	NA	53	True	ACTAAA	-38	NA	23014084	22944508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84859.nic	chr7	-	3062	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-9	-42	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	86.7214596870229	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTTGTTTATGTTTGT	-15	True	NA	11	True	AATAAA	-38	NA	23014139	22944550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84862.nic	chr7	-	2323	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-9	282	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	86.7214596870229	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGGTTATGTCTCAT	-15	True	NA	-18	True	AATAAA	-19	NA	23014139	22945289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84864.nic	chr7	-	1630	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	86.7214596870229	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAAACTACAG	-15	True	NA	4	True	NA	NA	NA	23014139	22945982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84866.known	chr7	-	6337	11	FSM	ENSG00000122591.13	ENST00000440481.6	6337	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	113.98284958712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATATTTTTTCCAG	-6	True	NA	-23	True	AATAAA	-5	NA	23014130	22941268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_23013924
transcript_84868.known	chr7	-	13178	11	FSM	ENSG00000122591.13	ENST00000432176.7	13178	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	122.993658373105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAGAGGCGG	-6	True	NA	NA	False	NA	NA	NA	23014130	22934210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22946164_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84875.known	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	44.0983748755741	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	50	False	NA	-3	True	AATAAA	-24	NA	23014074	22978163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
transcript_84876.known	chr7	-	3995	3	FSM	ENSG00000122591.13	ENST00000467005.6	3995	3	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	17.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTTTCCATGAAAAAAAAAA	-4	True	NA	NA	False	CATAAA	-7	NA	23014091	22980296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_22984046_22991060_22991140_23013924
transcript_84878.known	chr7	-	3578	3	FSM	ENSG00000230658.2	ENST00000662806.1	3578	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGACTGCAGAATGAAA	-15	True	NA	NA	False	NA	NA	NA	23105703	23100213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23103579_23104249_23104318_23105558
transcript_84879.known	chr7	+	3165	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	266.58039582463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	-28	True	NA	5	True	AATAAA	-15	NA	23105757	23175302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_8488.known	chr1	+	1931	12	FSM	ENSG00000117523.18	ENST00000476522.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	12.7849343156133	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	-2	True	NA	-31	True	AAAAAG	-9	NA	171485550	171532792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_84886.known	chr7	+	5619	11	FSM	ENSG00000122550.18	ENST00000339077.10	5619	11	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_8	192.954631973425	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTATATTCCTTTTGC	-1	True	NA	NA	False	AATAAA	-16	NA	23105784	23177914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_84888.known	chr7	+	3231	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	248.730697743564	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGATAATATTAAATATT	19	False	NA	-15	True	AATGAA	-31	NA	23106294	23175388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_84895.nic	chr7	+	1752	8	NIC	ENSG00000122550.18	novel	5619	11	NA	NA	-24	345	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	298.434213172412	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTTATTTGGATTCC	0	True	NA	3	True	AATAAA	-16	NA	23105733	23156513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23155990
transcript_84903.nic	chr7	+	1155	6	NIC	ENSG00000122550.18	novel	3165	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	394.191019684619	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGCATCACTACTCTT	0	True	NA	10	True	AATAAA	-20	NA	23105733	23126049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_84905.nic	chr7	+	1561	6	ISM	ENSG00000122550.18	ENST00000339077.10	5619	11	-51	33414	-24	599	5prime_fragment	FALSE	canonical	3	503	junction_4	203.64910999069	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTGTTGCTTTTCTTTC	0	True	NA	NA	False	AATAAA	-19	NA	23105733	23144500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850
transcript_84908.known	chr7	+	1233	6	FSM	ENSG00000122550.18	ENST00000410047.1	1233	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	407.073654269101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATGCTAGCATCACT	22	False	NA	4	True	AATAAA	-14	NA	23106297	23126043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106795_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_8491.nic	chr1	+	1896	12	ISM	ENSG00000117523.18	ENST00000647382.2	10624	35	-41	60831	-41	-112	5prime_fragment	FALSE	canonical	3	30	junction_4	7.04296143572602	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGGGAAAAAGACAGAG	NA	False	NA	8	True	AAAAAG	-23	NA	171485488	171532680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_84910.known	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_4	219.679738483093	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	-1	True	NA	6	True	AATAAA	-16	NA	23105784	23126045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_84912.known	chr7	+	588	5	FSM	ENSG00000122550.18	ENST00000479700.1	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	383.346775126647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCCAAGACCCCCAGTGA	-4	True	NA	NA	False	AATGAA	-44	NA	23106655	23125887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_84915.known	chr7	+	1653	8	FSM	ENSG00000136243.18	ENST00000438012.5	1653	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	58.0084441425275	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	-10	True	NA	18	True	AATAAA	-18	NA	23182023	23201006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197231_23199457_23199543_23200167
transcript_84916.known	chr7	+	1329	8	FSM	ENSG00000136243.18	ENST00000413919.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	56.6435326927829	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTAAAGCCTCCACCTC	30	True	NA	NA	False	AAGAAA	-18	NA	23182063	23200705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197248_23199457_23199543_23200167
transcript_84917.known	chr7	+	1571	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	16.6474889664745	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	14	True	NA	18	True	AATAAA	-18	NA	23182047	23201006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_84919.known	chr7	+	2010	7	FSM	ENSG00000136243.18	ENST00000485250.5	2010	7	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	47.1996351210002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATGGAACTGAAAAAT	-3	True	NA	-33	True	AAAAAG	-44	NA	23181840	23200955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182490_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_8492.nic	chr1	+	2008	12	ISM	ENSG00000117523.18	ENST00000647382.2	10624	35	-41	60719	-41	0	5prime_fragment	FALSE	canonical	3	30	junction_4	7.04296143572602	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	NA	False	NA	-31	True	AAAAAG	-9	NA	171485488	171532792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_84921.nnic	chr7	+	1566	6	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	52.4572206659865	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	-5	True	NA	18	True	AATAAA	-18	NA	23181975	23201006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23199457_23199543_23200167
transcript_84922.known	chr7	+	1285	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	49.0118353053627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTATGCACGAATA	32	True	NA	-21	True	NA	NA	NA	23182065	23200967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_84927.known	chr7	+	680	4	FSM	ENSG00000136243.18	ENST00000410002.7	680	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.0265649345719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCATTACAACGCTTCT	4	True	NA	NA	False	NA	NA	NA	23182037	23188219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23188032
transcript_84929.known	chr7	+	739	3	FSM	ENSG00000136243.18	ENST00000497500.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTTGATTCCCTGTATG	4	True	NA	NA	False	AATAAA	-19	NA	23182037	23187392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23182207_23185069_23185299_23187051
transcript_84930.known	chr7	+	808	2	FSM	ENSG00000136235.17	ENST00000468723.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAACCCAGGTTAACTG	-24	True	NA	NA	False	NA	NA	NA	23273292	23274550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23273615_23274064
transcript_84931.known	chr7	+	1673	4	FSM	ENSG00000136235.17	ENST00000409458.3	1673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATTCTGTCTTTTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	23246708	23258048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23246928_23253306_23253460_23254168_23254313_23256891
transcript_84933.known	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_8	12.6474971307951	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-7	True	NA	-4	True	AATAAA	-22	NA	23470491	23310208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_84940.nic	chr7	-	2135	13	ISM	ENSG00000136231.14	ENST00000258729.8	4274	15	-334	3420	-334	-1256	5prime_fragment	FALSE	canonical	3	130	junction_6	13.2442335460465	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAAGAAAACTTTGTT	-3	True	NA	NA	False	NA	NA	NA	23470825	23313628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_84948.nnic	chr7	-	3417	8	NNC	ENSG00000136231.14	novel	4274	15	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_7	51.6661180572146	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-22	True	NA	-4	True	AATAAA	-22	NA	23470407	23310208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343847_23469935
transcript_84950.nnic	chr7	-	2631	8	NNC	ENSG00000136231.14	novel	4274	15	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_7	51.6661180572146	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTAGACTC	6225	False	NA	NA	False	GATAAA	-3	NA	23470539	23311126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343847_23469935
transcript_84952.nnic	chr7	-	1076	6	NNC	ENSG00000136231.14	novel	4274	15	NA	NA	-48	-1256	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	59.8952418811378	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAAGAAAACTTTGTT	6225	False	NA	NA	False	NA	NA	NA	23470539	23313628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343847_23469935
transcript_84954.known	chr7	-	500	5	FSM	ENSG00000136231.14	ENST00000476938.5	500	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	5.87367006223537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTCAATATATCTT	6748	False	NA	NA	False	AGTAAA	-24	NA	23470016	23361340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_84956.known	chr7	+	2905	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	42.6015127535266	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTATATAAAATTTT	8	True	NA	NA	False	TTTAAA	-35	NA	23299338	23311729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
transcript_84962.nic	chr7	-	2150	9	NIC	ENSG00000164548.12	novel	2142	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	161.521476900132	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-7	True	NA	-4	True	AATAAA	-19	NA	23532034	23504779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522120_23522433_23531788
transcript_84964.known	chr7	-	1931	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	175.91719465419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-14	True	NA	-8	True	AATAAA	-15	NA	23532041	23504783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
transcript_84966.known	chr7	-	2142	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	166.92419686792	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-14	True	NA	-8	True	AATAAA	-15	NA	23532041	23504783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
transcript_84969.known	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_7	52.0019622863662	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-2	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
transcript_84970.nic	chr7	-	2430	8	NIC	ENSG00000164548.12	novel	2142	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	48	junction_7	128.575714214288	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-7	True	NA	-4	True	AATAAA	-19	NA	23532034	23504779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23522433_23531788
transcript_84978.known	chr7	-	1653	5	FSM	ENSG00000164548.12	ENST00000494255.5	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	153.424248409435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCTTTCTCAAAAAAG	-2	True	NA	NA	False	NA	NA	NA	23531981	23507156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_23507536_23512893_23513083_23516362_23516529_23521706_23522433_23531788
transcript_8498.nic	chr1	+	1409	10	ISM	ENSG00000117523.18	ENST00000647382.2	10624	35	-41	68641	-41	0	5prime_fragment	FALSE	canonical	3	30	junction_4	7.28943087415854	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGAAGTTTCCAACACT	NA	False	NA	NA	False	AAAAAG	-4	NA	171485488	171524870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820
transcript_84982.known	chr7	+	847	5	FSM	ENSG00000169193.12	ENST00000448353.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	30.7520324531567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAGCCAACACCACCA	10	False	NA	NA	False	NA	NA	NA	23597514	23643024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23597606_23597966_23598052_23604085_23604280_23611170_23611554_23642930
transcript_84984.known	chr7	+	2470	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	9.46337971105226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTACAGTCTTTTT	-33	True	NA	60	True	AATAAA	-19	NA	23597381	23644708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
transcript_84985.known	chr7	+	2324	3	FSM	ENSG00000169193.12	ENST00000409765.5	2324	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTACAGTCTTTT	27	True	NA	59	True	AATAAA	-18	NA	23597441	23644707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23597606_23611170_23611554_23642930
transcript_84987.known	chr7	+	625	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	41.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCATGTTTTTCTACT	1	True	NA	NA	False	AATAAA	-22	NA	23597415	23602220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23597606_23597966_23598052_23601870
transcript_84994.known	chr7	+	1403	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	81.2679040102686	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	12	True	NA	22	True	AATAAA	-25	NA	23680198	23702650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_8500.known	chr1	+	717	5	FSM	ENSG00000117523.18	ENST00000467601.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	12.852528934027	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTACTTTCTCTTTA	43	False	NA	NA	False	NA	NA	NA	171485595	171515859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171485736_171512031_171512201_171513000_171513173_171514535_171514646_171515733
transcript_85000.known	chr7	+	888	6	FSM	ENSG00000188732.11	ENST00000409192.7	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	43.0785329369513	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTAAAACCATCATCC	NA	False	NA	NA	False	NA	NA	NA	23680129	23702174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_85001.known	chr7	+	761	6	FSM	ENSG00000188732.11	ENST00000409653.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	89.5021787444306	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTGGAGAAATTAAAACC	-3	True	NA	NA	False	NA	NA	NA	23680183	23702167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_85004.known	chr7	+	1136	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	57.8937604582739	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	-3	True	NA	22	True	AATAAA	-25	NA	23680183	23702650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_8501.nic	chr1	+	580	3	ISM	ENSG00000117523.18	ENST00000476522.5	1931	12	-62	19634	-41	-2638	5prime_fragment	FALSE	canonical	3	44	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAGAAGAAAAGTGAGT	NA	False	NA	NA	False	AAAACA	-8	NA	171485488	171513158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_171485736_171512031_171512201_171512994
transcript_85012.known	chr7	+	555	4	FSM	ENSG00000122585.8	ENST00000242152.7	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCCTCCTCAATGAAA	1	True	NA	5	True	AATAAA	-18	NA	24284189	24291862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24284276_24285240_24285429_24289498_24289580_24291662
transcript_85013.known	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	45.6577277048864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	-6	True	NA	5	True	AATAAA	-18	NA	24573451	24694193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_85015.known	chr7	+	1703	11	FSM	ENSG00000105926.16	ENST00000409761.5	1703	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	88.1689287674519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAATTAAACTCTTAA	76	False	NA	-49	True	NA	NA	NA	24573414	24687632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24573594_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_85018.known	chr7	+	1191	8	FSM	ENSG00000105926.16	ENST00000430180.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	102.663110637241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	530	False	NA	NA	False	AAAAAG	-6	NA	24574012	24666060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_8502.known	chr1	+	1919	12	NNC	ENSG00000117523.18	novel	1931	12	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.7326332221623	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAAGAACTA	-2	True	NA	24	True	AAGAAA	-7	NA	171485550	171532775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517585_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_85022.known	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.9013534101431	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-22	True	NA	-3	True	ATTAAA	-18	NA	24757464	24698354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_85024.known	chr7	-	1997	9	FSM	ENSG00000105928.16	ENST00000409970.6	1997	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	21.5779835712237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTATTCTATTAAAGGA	6025	False	NA	-37	True	NA	NA	NA	24757475	24698388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24757395
transcript_8503.known	chr1	-	1738	9	FSM	ENSG00000117533.15	ENST00000474047.5	1738	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	50.4876222454574	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTAAATGCTTTTGTC	5	True	NA	NA	False	AATGAA	-2	NA	171742060	171701091	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_171702085_171704386_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_85030.known	chr7	-	498	4	FSM	ENSG00000172115.9	ENST00000413447.1	498	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1216.22366364086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTAATGAGTAATAATT	23	True	NA	-30	True	AAGAAA	-30	NA	25125260	25123715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_25123850_25123950_25124128_25124689_25124816_25125199
transcript_85031.known	chr7	-	799	4	FSM	ENSG00000172115.9	ENST00000409764.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1216.22366364086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAATGTTCAACTTTTCA	23	True	NA	7	True	AGTAAA	-45	NA	25125260	25123443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_25123850_25123950_25124128_25124689_25124845_25125199
transcript_85032.known	chr7	-	5432	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	129.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	23	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_25123850_25123950_25124128_25125199
transcript_85035.known	chr7	-	2438	14	FSM	ENSG00000122566.22	ENST00000676746.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4040.9218029741	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	726	False	NA	-30	True	AATAAA	-9	NA	26201047	26189940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_85045.known	chr7	-	2463	13	FSM	ENSG00000122566.22	ENST00000678697.1	2463	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	3365.45057553798	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTATGCACTGTATATT	472	False	NA	-32	True	AATAAA	-7	NA	26201301	26189942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26192300_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85046.known	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	3794.24229004363	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	1	True	NA	-7	True	AATAAA	-18	NA	26200746	26190124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_8505.known	chr1	-	1193	8	FSM	ENSG00000117533.15	ENST00000367740.2	1193	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.6915145276642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCAGTAAATATATTTT	-9	True	NA	-34	True	ACTAAA	-3	NA	171742074	171703949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719219_171728523_171728571_171738348_171738464_171741909
transcript_85050.known	chr7	-	2656	13	FSM	ENSG00000122566.22	ENST00000678935.1	2656	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3812.10833689472	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	472	False	NA	-30	True	AATAAA	-9	NA	26201301	26189940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85051.known	chr7	-	3522	13	FSM	ENSG00000122566.22	ENST00000678431.1	3522	13	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	3353.214871168	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTATGCACTGTATATT	292	False	NA	-32	True	AATAAA	-7	NA	26201481	26189942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191129_26191421_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85055.known	chr7	-	2731	13	FSM	ENSG00000122566.22	ENST00000678675.1	2731	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	3823.57700109901	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	726	False	NA	-30	True	AATAAA	-9	NA	26201047	26189940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_85056.known	chr7	-	4044	13	FSM	ENSG00000122566.22	ENST00000679123.1	4044	13	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	3411.16939463418	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	376	False	NA	NA	False	AAGAAA	-2	NA	26201397	26189665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_85057.known	chr7	-	2577	13	FSM	ENSG00000122566.22	ENST00000677396.1	2577	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3904.73516227413	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	472	False	NA	-46	True	NA	NA	NA	26201301	26189956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85059.known	chr7	-	3706	13	FSM	ENSG00000122566.22	ENST00000679001.1	3706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3524.96470727013	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	376	False	NA	-30	True	AATAAA	-9	NA	26201397	26189940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_85076.known	chr7	-	2949	12	FSM	ENSG00000122566.22	ENST00000676524.1	2949	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	3414.98451528985	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	472	False	NA	-30	True	AATAAA	-9	NA	26201301	26189940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85078.known	chr7	-	3622	12	FSM	ENSG00000122566.22	ENST00000679243.1	3622	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2811.32449594272	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATACTTGGTGTAAT	292	False	NA	-14	True	AATAAA	-11	NA	26201481	26190131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190457_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85079.known	chr7	-	3850	12	FSM	ENSG00000122566.22	ENST00000679021.1	3850	12	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	3454.39740831096	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	726	False	NA	NA	False	AAGAAA	-2	NA	26201047	26189665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_85080.known	chr7	-	2348	12	FSM	ENSG00000122566.22	ENST00000678779.1	2348	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3499.18703191149	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	472	False	NA	-46	True	NA	NA	NA	26201301	26189956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85090.known	chr7	-	3754	12	FSM	ENSG00000122566.22	ENST00000678449.1	3754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2811.32449594272	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	292	False	NA	-30	True	AATAAA	-9	NA	26201481	26189940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_851.nic	chr1	+	2202	8	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	490	junction_1	105.196220930028	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	7	False	NA	25	True	AATAAA	-16	NA	12019446	12032039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12030125_12031265_12031404_12031721
transcript_8510.known	chr1	-	586	8	FSM	ENSG00000117533.15	ENST00000482519.1	586	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	57.228150629649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGACAGAGATCTTCAT	0	True	NA	NA	False	NA	NA	NA	171742065	171704504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710759_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_85118.known	chr7	-	3664	12	FSM	ENSG00000122566.22	ENST00000354667.8	3664	12	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_11	2907.95409037618	2860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	1	True	NA	-16	True	AATAAA	-23	NA	26200746	26189926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_85122.known	chr7	-	4068	11	FSM	ENSG00000122566.22	ENST00000677906.1	4068	11	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2687.75033066689	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85123.known	chr7	-	3730	11	FSM	ENSG00000122566.22	ENST00000678962.1	3730	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2874.24230885289	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	472	False	NA	-30	True	AATAAA	-9	NA	26201301	26189940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26191055_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85128.known	chr7	-	4106	11	FSM	ENSG00000122566.22	ENST00000356674.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_10	2963.27738323634	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGCACTGTATATTC	726	False	NA	-31	True	AATAAA	-8	NA	26201047	26189941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_85129.known	chr7	-	3792	11	FSM	ENSG00000122566.22	ENST00000677321.1	3792	11	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_4	3509.38587932419	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8513.nic	chr1	+	2419	9	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	0	56	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	101.383476834246	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGGTTGGTTTGTCT	-24	True	NA	29	True	AATAAA	-31	NA	171781659	171796959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_171781796_171781987_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_85159.known	chr7	-	3628	11	FSM	ENSG00000122566.22	ENST00000618183.5	3628	11	0	0	0	0	multi-exon	FALSE	canonical	3	5879	junction_10	1275.85101402946	7071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	1	True	NA	-16	True	AATAAA	-23	NA	26200746	26189926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8516.known	chr1	+	3368	8	FSM	ENSG00000010165.20	ENST00000361735.4	3368	8	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_4	16.4577380844739	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGAATTTTGTCTTT	-24	True	NA	14	True	ATTAAA	-16	NA	171781659	171797716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_85178.known	chr7	-	4269	10	FSM	ENSG00000122566.22	ENST00000676932.1	4269	10	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2786.41071835399	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26190461_26190992_26192578_26193250_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_85179.known	chr7	-	4333	10	FSM	ENSG00000122566.22	ENST00000677839.1	4333	10	0	0	0	0	multi-exon	FALSE	canonical	3	5879	junction_9	1279.16578718754	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATATTCAGCGTTTGA	472	False	NA	-22	True	AATAAA	-17	NA	26201301	26189932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_8521.known	chr1	+	3022	8	FSM	ENSG00000010165.20	ENST00000362019.7	3022	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	110.230926435629	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	-2	True	NA	15	True	ATTAAA	-17	NA	171781681	171797717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_171781796_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_8524.nic	chr1	+	2652	7	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-206	56	intron_retention	FALSE	canonical	3	28	junction_4	119.289097946497	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGGTTGGTTTGTCT	8344	False	NA	29	True	AATAAA	-31	NA	171781453	171796959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171792016_171792236_171794395_171794528_171796481
transcript_85275.known	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	1612.75027205082	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	-10	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_85282.known	chr7	+	2061	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	0	0	0	0	multi-exon	FALSE	canonical	3	3918	junction_4	208.415546445077	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTAACTGTCTTCT	6	True	NA	32	True	ATTAAA	-19	NA	26201744	26213607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_85285.known	chr7	+	1717	6	FSM	ENSG00000122565.19	ENST00000409747.5	1717	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	1638.31530542811	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26	True	NA	32	True	AATAAA	-24	NA	26201764	26213356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208465_26208556_26211661_26211757_26212081
transcript_85309.known	chr7	+	2665	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	13.3010024684858	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	-12	True	NA	60	True	AATATA	-19	NA	26291861	26374383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_85310.known	chr7	+	2613	7	FSM	ENSG00000086300.16	ENST00000446848.6	2613	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.369716953905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCAACTTTGCCG	21	True	NA	-6	True	ATTAAA	-5	NA	26291894	26374317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26292134_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_85311.known	chr7	-	611	2	FSM	ENSG00000225792.2	ENST00000451368.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTATATCAACAAAAAAGT	-2	True	NA	NA	False	AATAAA	-33	NA	26376272	26372143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26372569_26376086
transcript_85312.known	chr7	+	1089	6	FSM	ENSG00000214870.10	ENST00000658860.1	1089	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.19089023002066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTCCTGAAAACATAAATA	-2	True	NA	-12	True	AATAAA	-2	NA	26398946	26496349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26399022_26412184_26412240_26493794_26494264_26495018_26495200_26495808_26495882_26496113
transcript_85314.known	chr7	+	2063	2	FSM	ENSG00000214870.10	ENST00000653790.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCCTGTAAATCCCTGC	12	True	NA	NA	False	NA	NA	NA	26398929	26401216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_26399022_26399245
transcript_85315.known	chr7	-	3839	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_9	3.69966214673719	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	-3	True	NA	-6	True	AATAAA	-18	NA	26864590	26667067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
transcript_85318.known	chr7	-	1570	2	FSM	ENSG00000253293.6	ENST00000396344.4	1570	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAAGAGAAGGGGACTT	9173	False	NA	NA	False	AAAAAG	-13	NA	27180261	27171219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_27172174_27179645
transcript_85319.known	chr7	-	757	2	FSM	ENSG00000253308.2	ENST00000523608.2	757	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTCTGGCTGTCGTGA	1443	False	NA	NA	False	AAAAAG	-34	NA	27241228	27239242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_27239976_27241204
transcript_85323.nnic	chr7	-	1886	8	NNC	ENSG00000106049.9	novel	1878	8	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	112.812649457191	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	23	True	NA	-7	True	AATAAA	-16	NA	27662901	27525441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649624_27662697
transcript_85324.known	chr7	-	1878	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	28.8231766154267	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	41	True	NA	-7	True	AATAAA	-16	NA	27662883	27525441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_85327.nnic	chr7	+	575	3	NNC	ENSG00000286478.1	novel	489	2	NA	NA	-14459	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTGTCTGCATAC	19	False	NA	5	True	ATTAAA	-18	NA	27603014	27627492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_27603171_27616646_27616796_27627222
transcript_85338.known	chr7	+	2478	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	0	0	0	0	multi-exon	TRUE	canonical	3	1030	junction_8	131.749866579629	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	721	False	NA	71	True	AGTAAA	-15	NA	27740094	27828881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_85342.known	chr7	+	3423	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_14	297.887746265267	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGTTGTCAAATTTA	6	True	NA	27	True	ATTAAA	-31	NA	27740161	27829767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
transcript_85349.known	chr7	+	2221	16	FSM	ENSG00000106052.14	ENST00000416801.6	2221	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	320.771334269272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	-9	True	NA	54	True	AATATA	-11	NA	27740146	27828864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_85352.nnic	chr7	+	2280	15	NIC	ENSG00000106052.14	novel	2478	17	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	174	junction_13	304.640772057845	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	724	False	NA	71	True	AGTAAA	-15	NA	27740097	27828881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27827737_27827821_27828627
transcript_85354.nnic	chr7	+	2660	15	NIC	ENSG00000106052.14	novel	3423	17	NA	NA	3	239	combination_of_known_splicesites	FALSE	canonical	3	174	junction_13	304.640772057845	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATGAAGTAGTTCTTC	724	False	NA	16	True	AATAAA	-18	NA	27740097	27829261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27827737_27827821_27828627
transcript_8536.nnic	chr1	-	1492	3	NIC	ENSG00000135845.10	novel	1661	5	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	2	12	junction_2	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGTAATAAATTACTGA	-6	True	NA	-19	True	AATAAA	-16	NA	172444103	172393132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_172394411_172399818_172399917_172443987
transcript_85366.known	chr7	-	3173	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	12.852528934027	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGGCTCTTTATTTT	-17	True	NA	NA	False	AATAAA	-19	NA	28180795	27830576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
transcript_85368.nnic	chr7	-	638	3	NNC	ENSG00000153814.13	novel	2919	4	NA	NA	-25	-70116	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATACCTGTCACCAGTTT	-42	True	NA	NA	False	AATAAA	-18	NA	28180820	27965334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_27965542_27991908_27991982_28180462
transcript_8537.nnic	chr1	-	874	3	NIC	ENSG00000135845.10	novel	1661	5	NA	NA	-17	-617	combination_of_known_splicesites	FALSE	canonical	2	12	junction_2	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCCAATGATAAATTT	-6	True	NA	NA	False	AATAAA	-21	NA	172444103	172393750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_172394411_172399818_172399917_172443987
transcript_85374.known	chr7	-	1739	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_12	120.402680848707	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTTGTTTTTGGGG	-23	True	NA	38	True	AATAAA	-18	NA	29146497	28995630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
transcript_85375.known	chr7	-	2087	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_12	45.5418000912959	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATGAGTCAATTCTT	-63	True	NA	NA	False	AATAAA	-17	NA	29146537	28995234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_8538.known	chr1	-	1456	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	1	True	NA	-4	True	ATTAAA	-16	NA	172444069	172441456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_172442831_172443987
transcript_85386.nic	chr7	-	1424	11	NIC	ENSG00000106066.15	novel	2087	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	144.384071143599	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGAGCTTTTGTTTTTG	-72	True	NA	35	True	AATAAA	-15	NA	29146546	28995633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_28995883_29030576_29030760_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_8539.known	chr1	-	2630	1	FSM	ENSG00000135845.10	ENST00000367728.1	2630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	11	True	NA	-4	True	ATTAAA	-16	NA	172444086	172441456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_172441500_172444100
transcript_85394.known	chr7	+	425	3	FSM	ENSG00000106069.24	ENST00000461824.1	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGGGGTACCCTGTA	-3	True	NA	NA	False	ATTAAA	-18	NA	29146588	29148657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_29146746_29146848_29146961_29148501
transcript_85396.known	chr7	+	570	2	FSM	ENSG00000106069.24	ENST00000470261.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATCTTCTGCACTGTCC	0	True	NA	NA	False	NA	NA	NA	29146631	29147304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_29146746_29146848
transcript_85406.nnic	chr7	-	1263	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-3	4039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.87059749960509	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-2	True	NA	-2	True	AATAAA	-20	NA	29563694	29510184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_29510644_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_8541.known	chr1	+	5495	22	FSM	ENSG00000094975.14	ENST00000616058.4	5495	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	50.2425409903805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACTGGCTCTTCTGTCT	-31	True	NA	31	True	AATAAA	-21	NA	172533117	172611831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
transcript_85410.known	chr7	+	4184	9	FSM	ENSG00000122574.12	ENST00000242140.10	4225	9	46	-5	46	5	multi-exon	FALSE	canonical	0	0	junction_4	9.84171605971235	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCGTTTCCTTGTTAAA	29	True	NA	34	True	AATAAA	-22	NA	29806553	29917066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285_29904363_29914492
transcript_85411.known	chr7	+	2140	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	54.3438537267079	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	-42	True	NA	19	True	AATAAA	-16	NA	30028360	30118345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
transcript_85417.known	chr7	-	4978	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	8.49836585598798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGTGAAAAATTCT	-36	True	NA	-3	True	AATAAA	-18	NA	30026702	30010586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
transcript_85426.known	chr7	-	751	2	FSM	ENSG00000106080.11	ENST00000479939.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACATAAAATTTTTCA	30	True	NA	NA	False	NA	NA	NA	30026636	30022390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30022817_30026311
transcript_85427.known	chr7	-	5254	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	25.4878922836162	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGGAGTGGCCTCT	3	True	NA	-6	True	AATAAA	-16	NA	29989801	29920108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
transcript_8543.nic	chr1	+	1038	6	ISM	ENSG00000094975.14	ENST00000610051.5	2925	23	-40	41137	-7	-1371	5prime_fragment	FALSE	canonical	3	74	junction_2	61.7297335163534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAAGTATTTGAGTTC	-6	True	NA	48	True	AAAAAG	-7	NA	172533142	172569142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_172533498_172551511_172551627_172555868_172556024_172557279_172557418_172557643_172557795_172569018
transcript_85431.known	chr7	-	757	5	FSM	ENSG00000106100.11	ENST00000419799.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.69258240356725	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCACCCAGCCTGACA	-13	True	NA	NA	False	NA	NA	NA	30478742	30456742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
transcript_85433.known	chr7	+	2536	18	FSM	ENSG00000106105.15	ENST00000675529.1	2536	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	533.846212449534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	-58	True	NA	-38	True	AAGAAA	-37	NA	30594831	30633976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_85435.known	chr7	+	2437	17	FSM	ENSG00000106105.15	ENST00000389266.8	2437	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	353.476876674769	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	-12	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_85440.known	chr7	-	556	7	FSM	ENSG00000196295.13	ENST00000582549.1	556	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.21414768690107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCCACCTGACTTCCCA	-1	True	NA	NA	False	NA	NA	NA	30594758	30578069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30584422_30584454_30584710_30584809_30585329_30585480_30594710
transcript_85443.known	chr7	-	431	5	FSM	ENSG00000196295.13	ENST00000583664.5	431	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.15475321515004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCTGACTTCCCACT	-3	True	NA	NA	False	NA	NA	NA	30594760	30578067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30585329_30585480_30594710
transcript_85444.known	chr7	-	784	4	FSM	ENSG00000006625.18	ENST00000447901.1	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	142.549016910753	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTATCTTACTTGGGTG	15	True	NA	NA	False	NA	NA	NA	30504801	30496976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30497740_30497897_30498802_30498939_30504568
transcript_85445.known	chr7	-	767	4	FSM	ENSG00000006625.18	ENST00000409390.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	304.437185639337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCATTTTCAGCAGTGC	17	True	NA	NA	False	NA	NA	NA	30504799	30497001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30497740_30497897_30500535_30500682_30504568
transcript_85446.known	chr7	-	1158	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_3	126.388290596875	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-13	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
transcript_85448.known	chr7	-	954	4	FSM	ENSG00000006625.18	ENST00000409436.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	322.759972735158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAAAGTTGATATTC	0	True	NA	NA	False	ATTAAA	-16	NA	30504816	30497472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497897_30498802_30498939_30500535_30500682_30504568
transcript_85451.known	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_2	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-17	True	NA	NA	False	AATAAA	-39	NA	30594774	30577499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
transcript_85452.known	chr7	-	1012	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	312.5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-13	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30498802_30498939_30504568
transcript_85454.known	chr7	-	1032	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	333.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGTCTCTACTAAA	2620	False	30504859	-7	True	AATAAA	-15	NA	30504841	30496622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30500535_30500682_30504568
transcript_85455.known	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	15	True	NA	-17	True	AATAAA	-5	NA	30504801	30496632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30497236_30504568
transcript_85456.known	chr7	-	2803	3	FSM	ENSG00000196295.13	ENST00000581794.6	2803	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-20	True	NA	NA	False	NA	NA	NA	30594777	30566403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_30568990_30585329_30585480_30594710
transcript_85457.known	chr7	+	2276	17	FSM	ENSG00000106105.15	ENST00000676140.1	2276	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	474.185288152216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	-12	True	NA	NA	False	AAAAAG	-32	NA	30594877	30633874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615897_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_85461.known	chr7	+	2733	18	FSM	ENSG00000106125.14	ENST00000265299.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_16	9.34276175613153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGGGCCCAGGCTCAT	1	True	NA	13	True	TATAAA	-16	NA	30771416	30892387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215_30852280_30853393_30853460_30859256_30859325_30872242_30872307_30875494_30875657_30882180_30882362_30882920_30882994_30891956
transcript_85465.nic	chr7	+	1397	4	ISM	ENSG00000106125.14	ENST00000265299.6	2733	18	-5	105743	-5	0	5prime_fragment	FALSE	canonical	3	35	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAAAAACAGCATCTT	-4	True	NA	NA	False	AAAAAG	-15	NA	30771411	30786644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748
transcript_85466.nic	chr7	+	590	2	ISM	ENSG00000106128.19	ENST00000461424.5	1054	9	11933	0	-179	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	57	False	NA	NA	False	AATAAA	-18	NA	30983901	30985216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_30984360_30985084
transcript_85468.known	chr7	+	1768	5	FSM	ENSG00000106341.11	ENST00000342032.8	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.56637297521078	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	-6	True	NA	9	True	AATAAA	-15	NA	31687214	31708455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_31687307_31692405_31692524_31695468_31695622_31696964_31697118_31707203
transcript_85469.known	chr7	+	569	4	FSM	ENSG00000106341.11	ENST00000409146.3	569	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	18.3847763108502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAGATGTATGCCAT	-6	True	NA	NA	False	NA	NA	NA	31687214	31707409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_31687307_31692405_31692524_31696964_31697118_31707203
transcript_85473.known	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	1021.4765048693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4402	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
transcript_85474.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1031.8644533077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4904	False	NA	-6	True	AATAAA	-16	NA	32490361	32487034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
transcript_85475.known	chr7	-	740	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	1010.22299518473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTTTCTTCTGATT	-18	True	NA	-5	True	ATTAAA	-18	NA	32495283	32486804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
transcript_85478.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000409952.3	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1031.8644533077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAAAATAAAGGTGTTT	16	True	NA	-34	True	AAAAAG	-23	NA	32495249	32487062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32494990
transcript_85481.known	chr7	-	2214	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_4	40.0530897684561	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGTTTTCTGCGTTTG	11	True	NA	-5	True	NA	NA	NA	32490380	32485337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
transcript_85482.known	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1105.63194599288	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	11	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
transcript_85484.known	chr7	+	6987	16	FSM	ENSG00000105778.20	ENST00000318709.9	6987	16	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_11	8.1948493308636	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCCTAGAAGTACCCTG	-37	True	NA	24	True	AATAAA	-36	NA	32495488	32588726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_85489.known	chr7	+	4336	15	FSM	ENSG00000105778.20	ENST00000409301.5	4336	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	29.4590688022191	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTTAATATCACTTG	0	True	NA	12	True	AATAAA	-21	NA	32495525	32586166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580801_32580891_32583791
transcript_8549.known	chr1	+	1690	5	FSM	ENSG00000117592.9	ENST00000340385.6	1690	5	0	0	0	0	multi-exon	FALSE	canonical	3	4206	junction_4	178.983763230076	4557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCATATTTTGAA	-3	True	NA	49	True	AATAAA	-28	NA	173477334	173488815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173477493_173481325_173481483_173485360_173485508_173486254_173486402_173487734
transcript_85491.known	chr7	+	472	1	FSM	ENSG00000273014.1	ENST00000609151.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTCAAATGTATTA	NA	False	NA	18	True	ATTAAA	-30	NA	32758881	32759353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_32758900_32759400
transcript_85492.known	chr7	-	3608	4	FSM	ENSG00000170852.12	ENST00000304056.9	3608	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	11.5854314646552	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTTTCTTTTGTTA	-5	True	NA	-24	True	AATAAA	-15	NA	32891760	32868171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_32870881_32874991_32875158_32879434_32879943_32891535
transcript_85499.nnic	chr7	-	327	3	NIC	ENSG00000170852.12	novel	3608	4	NA	NA	137	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	69	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTTGCTGATCTCTTC	-3	True	NA	NA	False	AATAAA	-24	NA	32891623	32870807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_32870881_32874991_32875158_32891535
transcript_85500.nic	chr7	-	1803	11	NIC	ENSG00000122643.23	novel	1311	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	145.36106769008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	29	False	33062793	-16	True	AATAAA	-24	NA	33062776	33014129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33029628_33029710_33035933_33035989_33062567
transcript_85501.known	chr7	-	1742	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_9	103.163420639414	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-3	True	NA	-16	True	AATAAA	-24	NA	33062796	33014129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_85502.known	chr7	-	1667	9	FSM	ENSG00000122643.23	ENST00000610140.7	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_8	37.6777039507452	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	29	False	33062793	-16	True	AATAAA	-24	NA	33062776	33014129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33062567
transcript_85508.nic	chr7	-	1809	5	NIC	ENSG00000122643.23	novel	1742	10	NA	NA	-32	1049	intron_retention	FALSE	canonical	3	89	junction_4	114.937754893681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGATCATGACAAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	33062828	33020775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_85510.known	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	22.3284571791246	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-4	True	NA	-2	True	AATAAA	-23	NA	33109404	33094796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
transcript_85511.known	chr7	+	3996	23	FSM	ENSG00000122507.21	ENST00000242067.11	3996	23	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_8	25.8982832322949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCCTCTCAGTACAA	12	True	NA	NA	False	AATAAA	-20	NA	33129563	33606069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_85515.nic	chr7	+	1831	10	NIC	ENSG00000122507.21	novel	3822	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	26.511120424698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTTGATTGGTATC	-2	True	NA	NA	False	ATTAAA	-15	NA	33129549	33314571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33314259
transcript_85516.nnic	chr7	+	1657	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	25.8662275640469	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	7332	False	NA	NA	False	AATAAA	-20	NA	33351925	33605632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_85517.nnic	chr7	+	1796	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	25.8662275640469	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAACTTTCATGTGA	7332	False	NA	-4	True	AATAAA	-7	NA	33351925	33605771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_85520.nic	chr7	+	1625	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	38.7040049607273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	7349	False	NA	NA	False	AATAAA	-20	NA	33351942	33605632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_85526.known	chr7	+	549	5	FSM	ENSG00000122507.21	ENST00000627264.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	51.9879793798528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAAGAACTCTTA	7333	False	NA	NA	False	GATAAA	-6	NA	33351926	33388007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_85527.nnic	chr7	+	989	4	NNC	ENSG00000122507.21	novel	614	3	NA	NA	-6389	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	51.5126737372033	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	NA	False	NA	NA	False	AATAAA	-20	NA	33527297	33605632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_33527515_33533953_33534177_33604864_33604976_33605194
transcript_85528.nnic	chr7	-	1210	3	NNC	ENSG00000236494.3	novel	1266	3	NA	NA	-1455	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCAGAATGTAGTTC	NA	False	NA	-32	True	ATTAAA	-16	NA	33804645	33793780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_33794548_33802921_33802968_33804248
transcript_85530.known	chr7	+	5287	15	FSM	ENSG00000164619.10	ENST00000649409.2	5287	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_12	9.21843760280096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTGTGGATTTGTT	4	True	NA	NA	False	AATAAA	-33	NA	33905538	34156427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_33905747_33906817_33906904_33937288_33937389_33966478_33966562_33970328_33970420_33974701_33974785_34046305_34046406_34051860_34051971_34055162_34055304_34058058_34058164_34062001_34062048_34078856_34079187_34085755_34086093_34143229_34143361_34153091
transcript_85532.known	chr7	+	2930	14	FSM	ENSG00000164619.10	ENST00000648848.1	2930	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	18.9011755684619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTGAAAACATCAACAAAAA	10	True	NA	-63	True	NA	NA	NA	33905544	34154406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_33905747_33906817_33906904_33937288_33937389_33966478_33966562_33970328_33970420_33974701_33974785_34046305_34046406_34051860_34051971_34055162_34055304_34058058_34058164_34062001_34062048_34085755_34086093_34143229_34143361_34153091
transcript_85540.known	chr7	+	602	3	FSM	ENSG00000164619.10	ENST00000496609.1	602	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTGGGGCTGGAAGGA	3	True	NA	NA	False	NA	NA	NA	33905502	33937560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_33905747_33906817_33906904_33937288
transcript_85543.nnic	chr7	-	2089	3	NNC	ENSG00000189212.13	novel	2562	5	NA	NA	14282	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_2	2	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTGTAAATTATTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	35093452	35079988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_35081741_35091846_35091947_35093215
transcript_85545.known	chr7	+	860	3	FSM	ENSG00000287249.1	ENST00000659178.1	860	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGCTTCTGTGTTGTTGT	57	False	NA	NA	False	AAGAAA	-25	NA	35036835	35125012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_35036922_35102465_35102558_35124330
transcript_85546.known	chr7	-	3057	8	FSM	ENSG00000122557.11	ENST00000396081.5	3057	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	11.8425038720358	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	8	True	NA	-4	True	AATAAA	-18	NA	35695135	35632658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
transcript_85552.known	chr7	+	1464	14	FSM	ENSG00000122545.21	ENST00000635175.1	1464	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	407.972066569014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCCATAATGATGGAT	-5	True	NA	NA	False	NA	NA	NA	35801218	35904385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_35801271_35831424_35831497_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_85559.known	chr7	+	4399	13	FSM	ENSG00000122545.21	ENST00000399034.7	4399	13	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_1	291.95874661024	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGCTCCAATGAATTAT	NA	False	NA	2	True	AATAAA	-15	NA	35800931	35907105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_85565.known	chr7	+	1584	12	FSM	ENSG00000122545.21	ENST00000435235.6	1584	12	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	377.109778610907	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGTACCTTTCCTACA	NA	False	NA	NA	False	NA	NA	NA	35801038	35904500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_35801271_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_85575.nic	chr7	+	1690	7	ISM	ENSG00000122547.11	ENST00000534978.1	2769	9	1596	0	1596	0	3prime_fragment	FALSE	canonical	3	38	junction_2	4.39696865275764	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTGCAGTGAGAGCATG	1603	False	NA	14	True	AATAAA	-14	NA	36154863	36299725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_36155203_36238984_36239037_36281114_36281226_36284685_36284821_36287638_36287778_36296992_36297188_36299006
transcript_85579.known	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_9	44.6629469244621	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-3	True	NA	34	True	AATAAA	-23	NA	36389861	36453791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_85583.known	chr7	+	4661	23	FSM	ENSG00000011426.11	ENST00000396068.6	4661	23	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_8	76.0655980493914	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-12	True	NA	34	True	AATAAA	-23	NA	36389820	36453791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_85585.known	chr7	-	1952	7	FSM	ENSG00000164542.13	ENST00000436884.5	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	6.30916441024923	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCTTGGTCAAATTGC	NA	False	NA	NA	False	NA	NA	NA	36367269	36326495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_36326919_36330981_36331080_36333855_36334162_36335045_36335179_36336153_36336298_36356901_36357591_36367110
transcript_85587.nic	chr7	+	1635	2	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-46	56161	-46	1209	5prime_fragment	FALSE	canonical	3	477	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGTAGTGGCTCAC	NA	False	NA	NA	False	AATAAA	-24	NA	36389774	36397630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_36390045_36396265
transcript_85588.known	chr7	-	5092	22	FSM	ENSG00000155849.16	ENST00000310758.9	5092	22	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_21	22.4306439240623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGATGTTTAAATTCC	15	True	NA	NA	False	AATAAA	-20	NA	37448864	36852905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_85589.known	chr7	-	2621	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_21	30.4054237911325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGGGCCCAGACATG	206	False	37449242	NA	False	NA	NA	NA	37449223	36855550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_85591.nic	chr7	-	1623	14	ISM	ENSG00000155849.16	ENST00000310758.9	5092	22	-45	280100	41	0	5prime_fragment	FALSE	canonical	3	145	junction_13	19.2734910076328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	520	False	37448926	NA	False	AGTAAA	-3	NA	37448909	37133005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_85592.nic	chr7	-	1535	14	ISM	ENSG00000155849.16	ENST00000448602.5	2621	22	217	277455	-56	0	5prime_fragment	FALSE	canonical	3	92	junction_13	32.511809415646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	1	True	NA	NA	False	AGTAAA	-3	NA	37449006	37133005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_85596.known	chr7	+	2515	3	FSM	ENSG00000086289.12	ENST00000199448.9	2515	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGTTATCCTCTCT	-6	True	NA	9	True	AATAAA	-24	NA	37920639	37951936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_37921209_37948839_37949049_37950199
transcript_8560.known	chr1	+	809	2	FSM	ENSG00000117592.9	ENST00000460950.1	809	2	0	0	0	0	multi-exon	FALSE	canonical	3	4500	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATCTCTCCTGGGATGT	-8	True	NA	NA	False	NA	NA	NA	173477329	173481971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173477493_173481325
transcript_85603.known	chr7	+	1365	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	141.303455961511	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGTAATAAAATCTG	-9	True	NA	-4	True	NA	NA	NA	38178350	38230381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_85608.known	chr7	+	1703	9	FSM	ENSG00000010270.14	ENST00000009041.12	1703	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	30.2611033341483	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCTGTTTTTTCA	-4	True	NA	13	True	ATTAAA	-14	NA	38178244	38230669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_8561.known	chr1	-	2660	6	FSM	ENSG00000183831.7	ENST00000333279.3	2660	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAATAAAAACA	1	True	NA	NA	False	NA	NA	NA	173669851	173608335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173610216_173624786_173624926_173627064_173627160_173646845_173647014_173659090_173659434_173669816
transcript_85614.known	chr7	+	1341	8	FSM	ENSG00000010270.14	ENST00000434197.5	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	120.993168975672	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	14	True	NA	-6	True	NA	NA	NA	38178262	38230379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_85624.nnic	chr7	-	4432	30	NNC	ENSG00000006715.16	novel	5854	29	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.6728778971051	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	-8	True	NA	50	True	AATAAA	-13	NA	38909200	38722973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_38723465_38724895_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_85627.known	chr7	-	5854	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_12	21.8817555166352	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	1	True	NA	50	True	AATAAA	-13	NA	38909191	38722973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_85633.known	chr7	-	3181	28	FSM	ENSG00000006715.16	ENST00000395969.6	3181	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	41.8745923142122	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGACTCACTTTTACT	18	False	NA	-5	True	AATAAA	-18	NA	38909174	38725554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_85634.nic	chr7	-	1301	15	NIC	ENSG00000006715.16	novel	5854	29	NA	NA	-9	1379	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	73.2305556835006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAAAGACATAAGATTC	-8	True	NA	NA	False	AATAAA	-37	NA	38909200	38771219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796414_38796527_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_85639.nic	chr7	-	1637	13	ISM	ENSG00000006715.16	ENST00000310301.9	5854	29	-9	49065	-9	560	5prime_fragment	FALSE	canonical	3	165	junction_12	23.0066415531593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTCAACTTTAATAG	-8	True	NA	NA	False	AATAGA	-36	NA	38909200	38772038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_8564.nnic	chr1	+	1877	2	NNC	ENSG00000289426.1	novel	624	3	NA	NA	-15	-16622	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTAGACAGTTATTACA	-5	True	NA	NA	False	AAAAAG	-6	NA	173637697	173661642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_173638035_173660102
transcript_85642.nic	chr7	+	1720	2	ISM	ENSG00000106536.21	ENST00000517348.1	1578	6	-18	286626	-18	-45584	5prime_fragment	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACATAGACTACTACT	NA	False	NA	NA	False	AAGAAA	-37	NA	39013062	39087082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_39013560_39085859
transcript_85645.known	chr7	+	871	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	30	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	9	True	NA	12	True	ATTAAA	-17	NA	39566403	39572881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39566548_39570505_39570628_39572276
transcript_85646.known	chr7	+	660	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAATTTACTTTAGTCC	-10	True	NA	NA	False	GATAAA	-4	NA	39566384	39571002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39566548_39570505
transcript_85649.known	chr7	+	2787	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_3	56.3443652905949	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	-15	True	NA	17	True	AATAAA	-16	NA	39623571	39708120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
transcript_85652.known	chr7	+	705	3	FSM	ENSG00000006451.8	ENST00000468201.1	705	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	487.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAATTTACTTTAAAA	-22	True	NA	105	True	ACTAAA	-24	NA	39623564	39706391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_39623826_39696684_39696860_39706122
transcript_85654.known	chr7	-	2234	1	FSM	ENSG00000259826.1	ENST00000569710.1	2234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACGACTATATTTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	39949755	39947521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_39947500_39949800
transcript_85655.known	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	5	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_40133260_40134228
transcript_85658.known	chr7	-	1632	2	FSM	ENSG00000122641.11	ENST00000442711.1	1632	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	0	True	NA	NA	False	ATTAAA	-10	NA	41700609	41689533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_41690543_41699986
transcript_8566.nnic	chr1	+	2545	2	NNC	ENSG00000289426.1	novel	624	3	NA	NA	-15	-15954	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATCATTGTGATATGC	-5	True	NA	NA	False	AATAAA	-14	NA	173637697	173662310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_173638035_173660102
transcript_85662.known	chr7	-	1453	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	4662.6187317322	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATACTTAAGTGTCAAA	23	False	NA	-26	True	AATAAA	-3	NA	42932154	42916881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
transcript_85667.known	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	9757	junction_7	587.92537357896	3743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	3	True	NA	-5	True	AATAAA	-24	NA	42932174	42916860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_85669.known	chr7	-	1289	7	FSM	ENSG00000106588.12	ENST00000457444.6	1289	7	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_5	3949.47226080762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGGCTTAAGGCTC	11	True	NA	-9	True	AATAAA	-20	NA	42932166	42916864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42927382_42927460_42932117
transcript_85673.known	chr7	-	683	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	4257.74384386849	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCAGCCTTTTAGGAG	-8	True	NA	-40	True	AATAAA	-12	NA	42932185	42917412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
transcript_85676.known	chr7	-	1823	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTTCATTGTAT	-39	True	NA	-3	True	ATTAAA	-17	NA	42912090	42909274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42910922_42911914
transcript_85677.known	chr7	-	578	2	FSM	ENSG00000136197.14	ENST00000432637.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTTCATGTCTT	107	False	NA	NA	False	NA	NA	NA	42911944	42910645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_42911194_42911914
transcript_8568.known	chr1	-	1824	2	FSM	ENSG00000183831.7	ENST00000367712.2	1824	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAATA	1129	False	NA	NA	False	NA	NA	NA	173669832	173657625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173659434_173669816
transcript_85681.nic	chr7	+	1066	4	NIC	ENSG00000106591.4	novel	859	3	NA	NA	-129	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	541.66676923076	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	NA	False	NA	14	True	AATAAA	-24	NA	42932246	42937857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_42932517_42934954_42935137_42937163_42937242_42937321
transcript_85686.known	chr7	+	859	3	FSM	ENSG00000106591.4	ENST00000223324.3	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_2	61	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	8	True	NA	14	True	AATAAA	-24	NA	42932375	42937857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_42932517_42934954_42935137_42937321
transcript_85687.known	chr7	+	2734	3	FSM	ENSG00000106591.4	ENST00000432845.1	2734	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	564	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGATTCTTTATGTT	8	True	NA	11	True	AGTAAA	-17	NA	42932375	42937627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_42932517_42934954_42937242_42937321
transcript_8569.nic	chr1	+	3586	13	NIC	ENSG00000076321.11	novel	3414	12	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_1	23.7292306847249	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	-12	True	NA	NA	False	AATAAA	-24	NA	173714940	173786692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_173715079_173715522_173715655_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_85693.nnic	chr7	+	1152	2	Antisense	novelGene_ENSG00000232006.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCTTCTCCTTTCCTGA	NA	False	NA	4	True	ATTAAA	-17	NA	42965334	42966834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_+_42965585_42965932
transcript_85695.known	chr7	+	2888	4	FSM	ENSG00000002746.15	ENST00000471043.1	2888	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.64098759787715	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAAGCCCTGA	NA	False	NA	NA	False	GGGGCT	-31	NA	43396672	43440597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43396720_43396813_43396890_43407561_43407732_43438002
transcript_8570.known	chr1	+	3414	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	9.29587129539216	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	28	True	NA	NA	False	AATAAA	-24	NA	173714980	173786692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_85710.known	chr7	-	1177	8	FSM	ENSG00000106603.20	ENST00000446564.5	1177	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	474.610474010863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACAGCAGCACCTACT	23	True	NA	NA	False	NA	NA	NA	43729483	43609232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43609642_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650611_43650713_43729428
transcript_85725.known	chr7	-	1737	7	FSM	ENSG00000106603.20	ENST00000415076.6	1737	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	369.402858979492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTGAATGTCATT	-7	True	NA	-4	True	AATAAA	-15	NA	43729513	43608455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43609496_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_85726.known	chr7	-	1520	7	FSM	ENSG00000106603.20	ENST00000446330.6	1520	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	361.445900362542	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCCCCAGCTTTTAAT	-7	True	NA	NA	False	NA	NA	NA	43729513	43608818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43609642_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_85731.known	chr7	-	1085	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	462.800532987305	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	17	True	NA	-10	True	AATAAA	-17	NA	43729489	43639256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
transcript_85732.nic	chr7	-	1014	7	ISM	ENSG00000106603.20	ENST00000446564.5	1177	8	-54	30024	-14	0	5prime_fragment	FALSE	canonical	3	47	junction_6	446.685105340813	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-31	True	NA	-10	True	AATAAA	-17	NA	43729537	43639256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650611_43650713_43729428
transcript_85733.nnic	chr7	-	1037	7	NIC	ENSG00000106603.20	novel	899	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_6	422.021721399898	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-34	True	NA	-10	True	AATAAA	-17	NA	43729540	43639256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43656032_43656154_43729428
transcript_85735.nic	chr7	-	984	7	ISM	ENSG00000106603.20	ENST00000438444.5	3223	8	174	8105	-20	0	5prime_fragment	FALSE	canonical	3	88	junction_5	432.080014452056	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-37	True	NA	-10	True	AATAAA	-17	NA	43729543	43639256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43665657_43665723_43729428
transcript_85741.known	chr7	-	899	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	96.5248154621391	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-17	True	NA	-10	True	AATAAA	-17	NA	43729523	43639256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_85750.known	chr7	+	1161	9	FSM	ENSG00000106605.11	ENST00000402924.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	245.091692025658	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	-8	True	NA	18	True	ATTAAA	-20	NA	43758686	43807342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43758735_43760016_43760111_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_85751.nnic	chr7	+	1322	8	NNC	ENSG00000106605.11	novel	757	3	NA	NA	-766	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	203.71468643519	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	994	False	NA	18	True	ATTAAA	-20	NA	43757913	43807342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_43758217_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_85752.known	chr7	+	1074	8	FSM	ENSG00000106605.11	ENST00000265523.9	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	55.1606189010876	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	-15	True	NA	18	True	ATTAAA	-20	NA	43758679	43807342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43758735_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_85760.known	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_3	180.392781328842	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-9	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
transcript_85761.known	chr7	-	729	4	FSM	ENSG00000062582.14	ENST00000467084.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	604.880704491941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCGTGGGCTACAGTG	68	False	NA	NA	False	NA	NA	NA	43869893	43866804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869523
transcript_85763.known	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_2	23.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-9	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43866983_43868962_43869075_43869307
transcript_85764.known	chr7	-	3571	6	FSM	ENSG00000106608.17	ENST00000453200.6	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	18.095303258028	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	12	True	NA	-26	True	AATAAA	-16	NA	43906596	43875912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43906561
transcript_85770.known	chr7	+	3982	7	FSM	ENSG00000078967.13	ENST00000222402.8	3982	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	13.0256157883866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGTCAATGATTTCCT	-14	True	NA	28	True	TATAAA	-20	NA	43926435	43956136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_85774.known	chr7	+	789	5	FSM	ENSG00000078967.13	ENST00000454350.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	25.4693443182191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCTCAGCCTGGCCCC	-8	True	NA	NA	False	NA	NA	NA	43926441	43953059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_43926557_43938430_43938495_43948631_43948738_43950598_43950693_43952649
transcript_85775.nic	chr7	-	2245	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	-36	70933	-10	-45488	5prime_fragment	FALSE	canonical	3	110	junction_1	190.222676531129	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAGAGAAAGAAAG	-22	True	NA	NA	False	NA	NA	NA	44019185	44011827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
transcript_85776.nic	chr7	-	511	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	-36	72667	-10	-47222	5prime_fragment	FALSE	canonical	3	110	junction_1	190.222676531129	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	-22	True	NA	NA	False	ATTAAA	-18	NA	44019185	44013561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
transcript_85777.known	chr7	-	324	3	FSM	ENSG00000272655.2	ENST00000418424.2	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	200.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGGCCTGGAGGGGC	50	False	NA	NA	False	NA	NA	NA	44019113	44014602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44014784_44016433_44016524_44019060
transcript_85780.known	chr7	+	2068	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_8	125.076310040444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	12	True	NA	24	True	NA	NA	NA	44044710	44061637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85782.known	chr7	+	2117	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_7	96.9540269062267	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	18	True	NA	25	True	NA	NA	NA	44044716	44061716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85785.known	chr7	+	1622	12	FSM	ENSG00000136279.21	ENST00000429716.5	1622	12	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	117.702524601304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACCCTTGGGAACAGT	9	True	NA	-74	True	NA	NA	NA	44044707	44061328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85786.known	chr7	+	1447	11	FSM	ENSG00000136279.21	ENST00000411855.5	1447	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	135.031996208306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATCTGGGAGGCTCTG	21	True	NA	NA	False	NA	NA	NA	44044719	44061237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050281_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85788.known	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-1	True	NA	0	True	AATAAA	-17	NA	44065567	44062726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44062931_44064831_44065013_44065115
transcript_85789.known	chr7	+	1854	11	FSM	ENSG00000136279.21	ENST00000441840.7	1854	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	135.230950599336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTCAGGAAAAGTAACAC	-13	True	NA	-4	True	NA	NA	NA	44044685	44061609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44044821_44050224_44050265_44056739_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_85790.known	chr7	-	2806	11	FSM	ENSG00000122678.17	ENST00000242248.10	2806	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.63944442658207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGCCTCTCCCCACAG	-30	True	NA	-13	True	AATAGA	-22	NA	44082530	44072061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_85793.known	chr7	-	2444	10	FSM	ENSG00000122678.17	ENST00000335195.10	2444	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.3293863807367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	36	False	NA	NA	False	ATTAAA	-26	NA	44082464	44072246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074397_44074523_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_85799.known	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.0682982984848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	22	True	NA	NA	False	NA	NA	NA	44082478	44075718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_85807.nnic	chr7	-	1688	11	NIC	ENSG00000106628.12	novel	2158	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_10	495.022423734521	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGCCCTGGGCACTC	-7	True	NA	-24	True	AATAAA	-23	NA	44123548	44114686	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122196_44123510
transcript_85808.known	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	484.63165393936	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	11	True	NA	-31	True	GGGGCT	-11	NA	44123530	44114784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
transcript_85812.known	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_10	252.650034632889	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-7	True	NA	-17	True	AATAAA	-30	NA	44123548	44114679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_85813.nnic	chr7	-	518	7	NNC	ENSG00000106631.8	novel	612	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	58.2334859757587	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-4	True	NA	-4	True	AATAAA	-20	NA	44141334	44138863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44140979_44141302
transcript_85823.known	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	26.1512693552127	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-2	True	NA	-4	True	AATAAA	-20	NA	44141332	44138863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
transcript_85824.known	chr7	-	646	6	FSM	ENSG00000106631.8	ENST00000457314.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	53.4288311681998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	468	False	NA	-9	True	AATAAA	-15	NA	44141074	44138868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140857_44140960
transcript_85825.known	chr7	-	634	6	FSM	ENSG00000106631.8	ENST00000434895.5	634	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	63.8228799099508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	506	False	NA	-9	True	AATAAA	-15	NA	44141036	44138868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44139023_44139520_44139665_44139781_44139861_44140322_44140428_44140711_44140788_44140960
transcript_85826.nic	chr7	-	1478	3	ISM	ENSG00000106633.18	ENST00000672743.1	846	4	-207	503	-2	0	5prime_fragment	FALSE	canonical	3	6	junction_2	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	NA	False	NA	-4	True	ATTAAA	-19	NA	44146146	44144274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_44145281_44145496_44145731_44145908
transcript_85827.known	chr7	-	1311	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	NA	False	NA	-4	True	ATTAAA	-19	NA	44146144	44144274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44145281_44145496_44145731_44146073
transcript_85828.known	chr7	+	2767	7	FSM	ENSG00000106636.9	ENST00000223369.3	2767	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_6	44.0621404634662	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCCTGTGCTTTCTT	-10	True	NA	28	True	GATAAA	-18	NA	44200977	44214294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
transcript_85829.known	chr7	-	8036	6	FSM	ENSG00000015676.18	ENST00000355451.8	8036	6	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_2	22.6627447587445	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGTTGCTTTTCT	-22	True	NA	-9	True	TATAAA	-7	NA	44490658	44379118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44427570_44427704_44484967_44485285_44490408
transcript_85834.known	chr7	+	408	1	FSM	ENSG00000146677.7	ENST00000487895.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCGTGTGCACGTTTT	24	False	NA	NA	False	AAGAAA	-9	NA	44467896	44468304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44467900_44468300
transcript_85835.known	chr7	-	3028	14	FSM	ENSG00000136271.11	ENST00000421223.5	3028	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	78.6275017005414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCCTCCAGCATAT	7233	False	NA	-18	True	AATAAA	-16	NA	44575051	44565804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44569983_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572573_44572745_44572889_44573051_44573582_44573745_44573835
transcript_85837.known	chr7	-	1853	14	FSM	ENSG00000136271.11	ENST00000446987.5	1853	14	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_10	78.1776916983991	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	20	True	NA	-17	True	AATAAA	-17	NA	44573895	44565803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572562_44572745_44572889_44573051_44573582_44573745_44573835
transcript_85839.known	chr7	-	1855	14	FSM	ENSG00000136271.11	ENST00000258772.10	1855	14	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_6	24.0912957838382	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	7	True	NA	-17	True	AATAAA	-17	NA	44573908	44565803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572573_44572745_44572889_44573051_44573582_44573745_44573835
transcript_8584.known	chr1	+	3336	17	FSM	ENSG00000117593.12	ENST00000649689.2	3336	17	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	27.973131640022	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTTTTTTTTAG	7	True	NA	25	True	ATTAAA	-41	NA	173824672	173858546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_85843.nnic	chr7	-	1001	5	Fusion	ENSG00000136271.11_ENSG00000158604.15	novel	1755	4	NA	NA	-4	-1951	multi-exon	FALSE	canonical	0	0	junction_1	215.65757000393	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGATTAGGATTCTT	-14	True	NA	NA	False	NA	NA	NA	44582235	44574600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_44575039_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85844.nnic	chr7	-	892	5	NNC	ENSG00000158604.15	novel	1755	4	NA	NA	0	2404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.65757000393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGTTGAGGGGACAC	-20	True	NA	NA	False	AAAAAG	-10	NA	44582241	44575489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_44575666_44580945_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85846.nnic	chr7	-	1035	5	NNC	ENSG00000158604.15	novel	1755	4	NA	NA	-8	2402	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	214.425977903798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGGGGTTGAGGGGAC	3	True	NA	NA	False	AAAAAG	-8	NA	44582218	44575491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_44575758_44580869_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85848.known	chr7	-	2294	5	FSM	ENSG00000158604.15	ENST00000457408.7	2294	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	215.65757000393	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-10	True	NA	NA	False	ATTAAA	-23	NA	44582231	44577893	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85854.known	chr7	-	1755	4	FSM	ENSG00000158604.15	ENST00000481238.1	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	78.9697551105626	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGCCATTGCCTACCT	-10	True	NA	-8	True	AATAAA	-27	NA	44582231	44579896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44581240_44581448_44581575_44581722_44581824_44582046
transcript_85855.known	chr7	+	3479	23	FSM	ENSG00000105953.16	ENST00000449767.5	3479	23	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	111.080019180576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGGAACTGGGCCTTGT	0	True	NA	NA	False	NA	NA	NA	44606590	44708328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647443_44647535_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_85856.known	chr7	+	4193	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	35.2865483699918	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	0	True	NA	8	True	CATAAA	-17	NA	44606626	44709066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_85858.known	chr7	+	1744	9	FSM	ENSG00000105953.16	ENST00000443864.6	1744	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	41.8292660705397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATGTGTGTGTGTGTG	-3	True	NA	12	True	AATAAA	-24	NA	44606587	44676594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969
transcript_85859.nic	chr7	+	847	2	ISM	ENSG00000105953.16	ENST00000443864.6	1744	9	-19	51516	-3	-41773	5prime_fragment	FALSE	canonical	3	481	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGATGTAAGTCATGTC	-2	True	NA	5	True	NA	NA	NA	44606568	44625078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_44606654_44624316
transcript_85866.known	chr7	+	818	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	8048.95907804233	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	0	True	NA	6	True	AATAAA	-17	NA	44796680	44801631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_85867.known	chr7	+	907	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	8056.84866433521	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	0	True	NA	5	True	AATAAA	-16	NA	44796680	44801630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_85868.known	chr7	+	2337	6	FSM	ENSG00000196262.15	ENST00000677107.1	2337	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8155.89619845667	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	0	True	NA	34	True	AATAAA	-19	NA	44796680	44803115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44797519_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_85873.known	chr7	+	446	2	FSM	ENSG00000196262.15	ENST00000620047.5	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	12	False	NA	6	True	AATAAA	-17	NA	44796692	44801631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44801286
transcript_85874.known	chr7	+	2237	5	FSM	ENSG00000196262.15	ENST00000468812.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	16368	junction_4	867.485554634773	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTAGTATTTCTTATTCC	0	True	NA	36	True	AATAAA	-21	NA	44796680	44803117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_85875.known	chr7	+	863	6	FSM	ENSG00000196262.15	ENST00000415933.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8547.84226340192	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	1	True	NA	-1	True	AATAAA	-10	NA	44796681	44801624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
transcript_85877.known	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2098	junction_4	183.778909290484	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-9	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_85879.known	chr7	-	687	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	1123.51393207007	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	2	True	NA	-22	True	GATAAA	-20	NA	44848076	44834227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
transcript_8588.known	chr1	+	3057	16	FSM	ENSG00000117593.12	ENST00000648807.1	3057	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	66.3821930607565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	-13	True	NA	-12	True	GATAAA	-5	NA	173824652	173858400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_85880.known	chr7	-	596	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	1040.01185890675	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	57	False	NA	-22	True	GATAAA	-20	NA	44848021	44834227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
transcript_85881.known	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	962.819124585021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-2	True	NA	-33	True	GATAAA	-9	NA	44848080	44834238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
transcript_85885.known	chr7	-	953	5	FSM	ENSG00000232956.10	ENST00000585030.6	956	5	0	3	0	-1	multi-exon	FALSE	canonical	3	13	junction_3	204.917666393115	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	161	False	44986691	-6	True	AATAAA	-17	NA	44986669	44983025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44985881_44986098_44986524
transcript_85886.known	chr7	-	982	5	FSM	ENSG00000232956.10	ENST00000578968.6	986	5	0	4	0	0	multi-exon	FALSE	canonical	3	409	junction_3	44.6682213659778	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-4	True	NA	-3	True	AATAAA	-20	NA	44986834	44983022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986020_44986098_44986524
transcript_85888.known	chr7	-	1346	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_2	47.6818157745231	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	131	False	NA	-3	True	AATAAA	-20	NA	44986699	44983022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
transcript_85889.known	chr7	-	731	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_2	224.423706412669	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-20	True	NA	-6	True	AATAAA	-17	NA	44986656	44983025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
transcript_85890.known	chr7	-	1123	4	FSM	ENSG00000232956.10	ENST00000667823.2	1124	4	0	1	0	-1	multi-exon	FALSE	canonical	3	409	junction_2	46.8069320602076	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	162	False	44986691	-6	True	AATAAA	-17	NA	44986668	44983025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984427_44986020_44986098_44986524
transcript_85892.known	chr7	-	509	3	FSM	ENSG00000232956.10	ENST00000438705.3	509	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	244.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGTATCTCCTGAATG	260	False	NA	-65	True	NA	NA	NA	44986570	44983084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44984047_44986524
transcript_85893.known	chr7	-	2998	3	FSM	ENSG00000232956.10	ENST00000580528.2	2998	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_1	13.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAATATGTGATTTAG	NA	False	NA	-18	True	AATAAA	-5	NA	44986961	44983037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44983323_44983821_44986098_44986524
transcript_85894.known	chr7	-	1626	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	5	-5	-3	multi-exon	FALSE	canonical	3	409	junction_1	55	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	156	False	NA	-8	True	AATAAA	-15	NA	44986674	44983027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44984427_44986020_44986098_44986524
transcript_85895.known	chr7	-	3228	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTAAATATGTGATTTA	-2	True	NA	-19	True	AATAAA	-4	NA	44986693	44983038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_44986098_44986524
transcript_85896.known	chr7	+	1983	10	FSM	ENSG00000136280.17	ENST00000461377.5	1983	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	116.776879159245	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	NA	False	NA	-62	True	NA	NA	NA	44999474	45076352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_85899.nnic	chr7	+	1650	9	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	260	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	132.207223705817	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	NA	False	NA	39	True	AAAAAG	-28	NA	44999734	45076453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_44999858_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_8590.known	chr1	+	3209	16	FSM	ENSG00000117593.12	ENST00000647645.1	3209	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	67.5266531740533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAGTAAAAGTCATTTT	6	False	NA	-4	True	ATTAAA	-12	NA	173824707	173858517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_85907.nnic	chr7	-	990	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	13.5462171841441	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	-13	True	NA	-1	True	AATAAA	-21	NA	45000008	44988765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999279_44999374_44999717
transcript_85910.nnic	chr7	-	1013	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_3	18.4028983224563	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	NA	False	NA	-1	True	AATAAA	-21	NA	45000125	44988765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999717
transcript_85913.known	chr7	-	4836	8	FSM	ENSG00000136274.9	ENST00000490531.3	4836	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	9.19183310979738	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTCTGGTGTCTCCTC	-22	True	NA	-5	True	AATAAA	-15	NA	45088969	45080436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45080524_45080639_45080763_45080875_45081023_45081116_45081264_45081600_45081673_45081754_45081868_45082107_45086113_45088827
transcript_85918.known	chr7	-	2190	11	FSM	ENSG00000136270.14	ENST00000494076.5	2190	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	208.175526899778	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	-3	True	NA	-3	True	NA	NA	NA	45111706	45100100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109244_45111642
transcript_85920.known	chr7	-	2226	11	FSM	ENSG00000136270.14	ENST00000258770.8	2226	11	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	70.4204515748089	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	6	True	NA	-2	True	NA	NA	NA	45111697	45100099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
transcript_85921.nic	chr7	-	2245	11	NIC	ENSG00000136270.14	novel	2226	11	NA	NA	-19	0	intron_retention	FALSE	canonical	3	120	junction_10	179.011619734586	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-2	True	NA	NA	NA	45111737	45100099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111663
transcript_8594.known	chr1	+	3133	16	FSM	ENSG00000117593.12	ENST00000647730.1	3133	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	69.0569491233302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	-3	True	NA	-12	True	GATAAA	-5	NA	173824662	173858400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_85941.known	chr7	-	1917	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	217.327769452042	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-15	True	NA	-2	True	NA	NA	NA	45111718	45100099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
transcript_85942.known	chr7	-	2225	9	FSM	ENSG00000136270.14	ENST00000395655.8	2225	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	273.386145177476	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-2	True	NA	NA	NA	45112047	45100099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111663
transcript_85956.known	chr7	+	1323	3	FSM	ENSG00000122679.8	ENST00000242249.8	1323	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTGTTTCATGT	-21	True	NA	4	True	AGTAAA	-19	NA	45157790	45184250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_45157887_45177308_45177442_45183156
transcript_85961.nic	chr7	-	1712	13	FSM	ENSG00000214765.9	ENST00000338231.8	1716	13	0	4	0	0	multi-exon	FALSE	canonical	3	25	junction_1	50.995846780781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	45769018	45723787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85965.nnic	chr7	-	2019	12	FSM	ENSG00000214765.9	ENST00000686032.1	1978	12	-43	2	0	0	multi-exon	FALSE	canonical	3	14	junction_2	51.6597258289983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	-2	True	NA	NA	NA	45769018	45726332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45726862_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85967.nnic	chr7	-	1824	11	FSM	ENSG00000214765.9	ENST00000686085.1	1822	11	-4	2	0	0	multi-exon	FALSE	canonical	3	74	junction_1	26.1426854014655	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	-2	True	NA	NA	NA	45769018	45726332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_8597.known	chr1	+	1793	14	FSM	ENSG00000117593.12	ENST00000648458.1	1793	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	68.9648740023053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTGGTGTTTCAT	-10	True	NA	NA	False	ATTAAA	-19	NA	173824959	173852014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173851835
transcript_85973.nic	chr7	-	1159	9	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	19	8182	0	0	5prime_fragment	FALSE	canonical	3	111	junction_4	19.7800404448525	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATATATTTTTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	45769018	45736786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85974.nic	chr7	-	868	6	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	19	20039	0	9340	5prime_fragment	FALSE	canonical	3	111	junction_1	21.9399179579141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTTAAAAAGATAAAGGT	NA	False	NA	NA	False	AATATA	-38	NA	45769018	45748643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_85977.known	chr7	-	1304	9	FSM	ENSG00000136273.13	ENST00000458191.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	40.5763169841719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCATTGACCTCCTTGG	2	True	NA	NA	False	NA	NA	NA	47979553	47964319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_85978.nic	chr7	-	2276	9	NIC	ENSG00000136273.13	novel	1304	9	NA	NA	1	-63	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	24.4716034415402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGCTTAAGATTTTAT	4	True	NA	-18	True	AATACA	-21	NA	47979614	47963350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_85981.known	chr7	-	1125	8	FSM	ENSG00000136273.13	ENST00000432325.5	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	40.9020731972932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTCTGTTTTGCT	2	True	NA	-6	True	GATAAA	-15	NA	47979553	47965165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_85982.known	chr7	-	3007	8	FSM	ENSG00000136273.13	ENST00000258774.10	3007	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	16.5591087209624	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGGTGTCTGTTTCTG	3	True	NA	-1	True	AAGAAA	-18	NA	47979615	47963287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_85985.known	chr7	-	548	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCCTCATTTTAAAATT	2	True	NA	NA	False	TTTAAA	-43	NA	47979553	47978259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_47978594_47978688_47978817_47979467
transcript_85987.known	chr7	+	2056	9	FSM	ENSG00000164746.14	ENST00000430738.5	2056	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.968245836551854	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTCCCTTTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	48035510	48061304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48035631_48036292_48036364_48041333_48041520_48043480_48043590_48046459_48046617_48049879_48049978_48052699_48052924_48054594_48054607_48060225
transcript_85992.known	chr7	+	1664	9	FSM	ENSG00000183696.14	ENST00000395564.9	1664	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	106.237646340645	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAATGAGAGATGACTG	-1	True	NA	NA	False	ATTAAA	-17	NA	48089264	48108736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_85994.nic	chr7	+	1269	8	NIC	ENSG00000183696.14	novel	1664	9	NA	NA	-111	0	combination_of_known_junctions	TRUE	canonical	3	36	junction_5	112.934873773718	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	107	False	NA	14	True	ATTAAA	-15	NA	48089115	48108419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_48089419_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101871_48106872_48107083_48107360_48107508_48108217
transcript_85998.nic	chr7	+	1151	7	NIC	ENSG00000183696.14	novel	861	7	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	127.549990199921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	107	False	NA	14	True	ATTAAA	-15	NA	48089115	48108419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_48089419_48090187_48090365_48094762_48094828_48101823_48101871_48106872_48107083_48107360_48107508_48108217
transcript_85999.known	chr7	+	955	6	FSM	ENSG00000183696.14	ENST00000395560.7	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	68.6364334737754	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	-1	True	NA	14	True	ATTAAA	-15	NA	48089264	48108419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_8600.known	chr1	-	632	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	91	0	0	multi-exon	FALSE	canonical	3	1580	junction_11	440.04686076533	2508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	0	True	NA	-12	True	AATAAA	-14	NA	173867987	173863900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_86000.known	chr7	+	782	6	FSM	ENSG00000183696.14	ENST00000417464.6	782	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	115.481600266016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	110	False	NA	14	True	ATTAAA	-15	NA	48089375	48108419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_48089419_48090249_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_86001.nic	chr7	+	947	6	NIC	ENSG00000183696.14	novel	918	7	NA	NA	115	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	85.4063229509385	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	225	False	NA	14	True	ATTAAA	-15	NA	48089490	48108419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_86006.known	chr7	-	572	5	FSM	ENSG00000132436.12	ENST00000448788.1	572	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	10.8483869768736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGATATTACGCATTCA	13	True	NA	NA	False	NA	NA	NA	50450336	50447182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_50447298_50447967_50448056_50448180_50448290_50449499_50449724_50450300
transcript_86009.known	chr7	-	3930	4	FSM	ENSG00000132436.12	ENST00000433017.6	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	10.2089285540757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGCTTGCATTCTAA	-1	True	NA	-18	True	ATTAAA	-19	NA	50450350	50444132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_50447298_50448180_50448290_50449117_50449724_50450300
transcript_86010.known	chr7	-	3485	4	FSM	ENSG00000132436.12	ENST00000395556.6	3485	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	9.03081145609604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGCTTGCATTCTAA	-1	True	NA	-18	True	ATTAAA	-19	NA	50450350	50444132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_50447298_50448180_50448290_50449562_50449724_50450300
transcript_86011.known	chr7	-	582	4	FSM	ENSG00000132436.12	ENST00000422854.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	9.10433352249844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTCAATAAATAATGTT	-19	True	NA	NA	False	NA	NA	NA	50450368	50446980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_50447298_50447967_50448056_50448180_50448290_50450300
transcript_86013.known	chr7	-	512	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	2042.14413464541	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAATATCTCTTTTTT	-1	True	NA	-25	True	ATTAAA	-13	NA	54759182	54752256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
transcript_86015.known	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_3	770.798719943583	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-7	True	NA	-21	True	ATTAAA	-17	NA	54759211	54752252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
transcript_86016.known	chr7	+	4459	9	FSM	ENSG00000132434.10	ENST00000254770.3	4459	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	9.42652507555144	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCGTCATTCGTTTTC	3	True	NA	20	True	AGTAAA	-25	NA	55365336	55433737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_55366230_55391792_55391911_55398422_55398631_55399956_55400105_55401173_55401321_55411906_55412090_55425253_55425431_55428374_55428448_55431225
transcript_86018.known	chr7	-	2939	5	FSM	ENSG00000154978.13	ENST00000285279.10	2939	5	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	71.6467026456905	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGATTGTTTTGTT	7	True	NA	-9	True	AATAAA	-15	NA	55572502	55470612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_55473046_55492281_55492419_55497612_55497691_55521071_55521131_55572270
transcript_86024.known	chr7	+	1786	3	FSM	ENSG00000239789.6	ENST00000285298.9	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	157.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	0	True	NA	18	True	AATAAA	-15	NA	55951876	55956500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_55951931_55953178_55953319_55954908
transcript_86027.nnic	chr7	+	501	3	NNC	ENSG00000239789.6	novel	1786	3	NA	NA	42	67	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	277.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTAAGTTTCATCAC	-5	True	NA	-5	True	AAAAAG	-3	NA	55951918	55955239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_55951949_55953178_55953319_55954908
transcript_86028.nnic	chr7	+	603	3	NNC	ENSG00000239789.6	novel	1786	3	NA	NA	42	169	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	277.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATGGTCGTGTTTCAA	-5	True	NA	30	True	AGTAAA	-25	NA	55951918	55955341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_55951949_55953178_55953319_55954908
transcript_86029.known	chr7	+	718	3	FSM	ENSG00000239789.6	ENST00000443449.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	348.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGCGGGAGTGGAAG	39	False	NA	-72	True	NA	NA	NA	55951962	55955172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_55952277_55953178_55953319_55954908
transcript_86047.nic	chr7	-	1881	8	NIC	ENSG00000146733.14	novel	2178	8	NA	NA	-38	0	intron_retention	FALSE	canonical	3	51	junction_7	176.81132570613	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-10	True	NA	-24	True	AATAAA	-17	NA	56034210	56011067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033380_56033495_56033960
transcript_86048.known	chr7	-	1974	8	FSM	ENSG00000146733.14	ENST00000275605.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	150.438271292207	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-13	True	NA	-20	True	AATAAA	-21	NA	56051444	56011063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034107_56051137
transcript_86049.known	chr7	-	2178	8	FSM	ENSG00000146733.14	ENST00000395471.7	2178	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_7	119.86182521077	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-27	True	NA	-24	True	AATAAA	-17	NA	56051604	56011067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56051137
transcript_86057.nnic	chr7	-	801	6	Fusion	ENSG00000185290.4_ENSG00000146733.14	novel	1409	7	NA	NA	151	-73	multi-exon	TRUE	non_canonical	0	0	junction_1	88.4	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACGGATTCGGCAGCCT	145	False	NA	-8	True	ATTAAA	-16	NA	56116266	56011140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_56011234_56011543_56011870_56018234_56018340_56021117_56021232_56116014_56116129_56116217
transcript_86059.nnic	chr7	-	695	5	Fusion	ENSG00000185290.4_ENSG00000146733.14	novel	1409	7	NA	NA	151	-73	multi-exon	FALSE	non_canonical	0	0	junction_1	95.6958071181805	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACGGATTCGGCAGCCT	145	False	NA	-8	True	ATTAAA	-16	NA	56116266	56011140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_56011234_56011543_56011870_56021118_56021232_56116014_56116129_56116217
transcript_86061.nnic	chr7	-	657	5	Fusion	ENSG00000185290.4_ENSG00000146733.14	novel	1409	7	NA	NA	151	-77	multi-exon	FALSE	non_canonical	0	0	junction_1	95.6958071181805	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTGCTTTTTTTTTT	145	False	NA	38	True	TTTAAA	-18	NA	56116266	56011614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_56011870_56020091_56020217_56021117_56021232_56116014_56116129_56116217
transcript_86067.known	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2378	junction_7	278.997105030473	1885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	-13	True	NA	32	True	AATAAA	-18	NA	56051764	56063989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_8607.nic	chr1	-	629	12	FSM	ENSG00000234741.9	ENST00000689238.1	607	12	-28	6	-28	0	multi-exon	FALSE	canonical	3	1286	junction_5	594.739181671156	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	NA	False	NA	-12	True	AATAAA	-14	NA	173868023	173863900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_86080.known	chr7	+	2529	13	FSM	ENSG00000146731.11	ENST00000335503.3	2529	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	806.457324764718	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	NA	False	NA	32	True	AATAAA	-18	NA	56051684	56063989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56051986_56052421_56052486_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_86092.known	chr7	+	1171	10	FSM	ENSG00000129103.19	ENST00000413756.5	1171	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	171.711716490887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCCCTCTGTGGCAGG	6	True	NA	NA	False	NA	NA	NA	56064288	56079736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56078921_56079040_56079527
transcript_86096.known	chr7	+	1990	9	FSM	ENSG00000129103.19	ENST00000434526.8	1990	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_5	21.9715725427198	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	3	True	NA	30	True	AATAAA	-24	NA	56064285	56080670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_86098.known	chr7	+	1876	8	FSM	ENSG00000129103.19	ENST00000342190.11	1876	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	146.70712181703	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	-28	True	NA	30	True	AATAAA	-24	NA	56064254	56080670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56079527
transcript_86100.known	chr7	+	1792	8	FSM	ENSG00000129103.19	ENST00000423763.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	141.156881894304	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAAAATCTCCTGCAA	18	True	NA	-2	True	NA	NA	NA	56064300	56080638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_86101.known	chr7	+	2006	8	FSM	ENSG00000129103.19	ENST00000651586.1	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	136.936302784938	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	2528	False	NA	29	True	AATAAA	-23	NA	56064223	56080669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_86103.known	chr7	+	913	8	FSM	ENSG00000129103.19	ENST00000452216.5	913	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.604407876221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCCCATCCCTCTG	-18	True	NA	NA	False	NA	NA	NA	56064264	56079729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_86105.known	chr7	+	1771	7	FSM	ENSG00000129103.19	ENST00000438133.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	157.042103342455	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	25	True	NA	29	True	AATAAA	-23	NA	56064307	56080669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_86109.known	chr7	+	1287	6	FSM	ENSG00000129103.19	ENST00000395435.7	1287	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	175.431582105389	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCATTGCATTGTGGG	-29	True	NA	NA	False	NA	NA	NA	56064253	56080187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56078101_56078187_56078363_56078509_56079527
transcript_86111.known	chr7	+	1683	6	FSM	ENSG00000129103.19	ENST00000436782.5	1683	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	169.505634124651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGACATTTGTGTCTTT	-6	True	NA	25	True	AATAAA	-19	NA	56064276	56080665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_86113.known	chr7	+	1195	3	FSM	ENSG00000129103.19	ENST00000483327.5	1195	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTGATGGTGCCAC	18	True	NA	NA	False	NA	NA	NA	56064300	56073956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_56064379_56068481_56068639_56072996
transcript_86116.known	chr7	-	797	4	FSM	ENSG00000106153.13	ENST00000395422.4	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	1138	junction_1	65.2380257212004	1605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTTCATTTAGTCTA	13	True	NA	-14	True	AATAAA	-16	NA	56106476	56101572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_56101862_56102866_56103012_56104225_56104476_56106363
transcript_86118.known	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	7.11805216802087	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	2	True	NA	0	True	ATTAAA	-20	NA	64563071	64519877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
transcript_86119.known	chr7	-	2159	4	FSM	ENSG00000173041.12	ENST00000447137.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	22.647050335284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTCTGTTATTAAT	0	True	NA	NA	False	NA	NA	NA	64563041	64524698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64526518_64543706_64543803_64544305_64544433_64562924
transcript_86121.known	chr7	-	769	3	FSM	ENSG00000173041.12	ENST00000476563.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	26	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTCAATCCTTAGTAA	67	False	NA	NA	False	NA	NA	NA	64563022	64521925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64522501_64543706_64543803_64562924
transcript_86122.nnic	chr7	-	2805	2	NIC	ENSG00000173041.12	novel	2993	4	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	NA	False	NA	0	True	ATTAAA	-20	NA	64563106	64519877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_64522501_64562924
transcript_86127.nnic	chr7	+	638	3	FSM	ENSG00000286456.2	ENST00000686440.1	636	3	-9	7	-9	-7	multi-exon	FALSE	canonical	3	190	junction_2	22	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACCAAGGCTATGTG	-9	True	NA	11	True	AATAAA	-22	NA	64574663	64614827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64574849_64599658_64599783_64614498
transcript_86129.known	chr7	+	5664	4	FSM	ENSG00000196247.13	ENST00000620827.6	5630	4	-29	-5	5	5	multi-exon	FALSE	canonical	3	88	junction_1	18.4028983224563	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTCTTTGAACATG	NA	False	NA	NA	False	AATAAA	-17	NA	64666103	64711582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64666286_64691247_64691375_64691864_64691961_64706323
transcript_86136.known	chr7	+	842	5	FSM	ENSG00000197008.10	ENST00000494380.5	842	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	24.7626230436115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTAGAGAGAATTT	-1	True	NA	71	True	CATAAA	-4	NA	64794424	64831803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64830939_64831077_64831450
transcript_86138.known	chr7	+	2230	4	FSM	ENSG00000197008.10	ENST00000440598.2	2230	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	21.249836600679	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAATGTGAAAATGAT	2	True	NA	NA	False	ACTAAA	-29	NA	64794427	64833327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64815571_64815654_64831450
transcript_86140.known	chr7	+	2579	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.7550697307953	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	2	True	NA	19	True	AATAAA	-33	NA	64794427	64833680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
transcript_86142.known	chr7	+	2679	4	FSM	ENSG00000197008.10	ENST00000359735.7	2679	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	27.3130005674953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGGTTTTGTTTTAGTG	NA	False	NA	20	True	AATAAA	-34	NA	64794387	64833681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64830939_64831077_64831450
transcript_86144.known	chr7	+	1066	3	FSM	ENSG00000197008.10	ENST00000440155.6	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACAAATGTGAAGAATGT	-1	True	NA	NA	False	AAGAAA	-20	NA	64794424	64832242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64814917_64815045_64831450
transcript_86148.known	chr7	+	2308	2	FSM	ENSG00000197008.10	ENST00000430838.2	2308	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	23	False	NA	15	True	AATAAA	-29	NA	64794489	64833676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64794572_64831450
transcript_86149.nnic	chr7	+	479	2	NNC	ENSG00000197008.10	novel	2308	2	NA	NA	-17	-32298	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTCATATCTGACT	9	False	NA	5	True	CATAAA	-14	NA	64794407	64799505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_64794572_64799190
transcript_86152.known	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	26.5377090194312	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	13	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
transcript_86155.nnic	chr7	+	1442	4	NNC	ENSG00000198039.12	novel	3698	4	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.2087562499444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTCTCTATGTGTTTC	-6	True	NA	NA	False	ATTAAA	-15	NA	64903268	64924433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923365
transcript_86156.nic	chr7	+	1259	4	NIC	ENSG00000198039.12	novel	3698	4	NA	NA	-36	-213	combination_of_known_junctions	TRUE	canonical	3	17	junction_3	40.9986449640581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAGACTCTTTTGAC	NA	False	NA	NA	False	CATAAA	-18	NA	64903216	64924218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923385
transcript_86157.nic	chr7	+	1472	4	NIC	ENSG00000198039.12	novel	1472	5	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	40.9986449640581	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTTCTCTATGTGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	64903216	64924431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923385
transcript_86158.known	chr7	+	2000	4	FSM	ENSG00000198039.12	ENST00000476120.2	3698	4	-26	1724	-6	133	multi-exon	FALSE	canonical	3	47	junction_1	28.0832096931007	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	64903246	64929257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64903420_64917580_64917708_64918196_64918293_64927653
transcript_86161.nic	chr7	+	882	4	ISM	ENSG00000198039.12	ENST00000395375.3	3757	5	-56	12292	-21	-5757	5prime_fragment	FALSE	canonical	3	51	junction_2	29.4882274061286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	64903231	64918674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196
transcript_86162.nnic	chr7	+	1763	2	NIC	ENSG00000198039.12	novel	3698	4	NA	NA	8	133	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	-14	True	NA	NA	False	AATAAA	-17	NA	64903260	64929257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_64903420_64927653
transcript_86163.nnic	chr7	+	3464	2	NIC	ENSG00000198039.12	novel	3698	4	NA	NA	8	-8	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATACATTTCTGAGTCCT	-14	True	NA	6	True	AATAAA	-23	NA	64903260	64930958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_64903420_64927653
transcript_86164.known	chr7	+	752	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	98	83	28	-36	multi-exon	FALSE	canonical	3	4	junction_1	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGGGTAAATC	67	False	NA	-78	True	NA	NA	NA	64947837	64950641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_64947858_64949115_64949410_64950203
transcript_86166.known	chr7	-	3206	2	FSM	ENSG00000213462.5	ENST00000394323.3	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTCTCCGGCCTCCTG	2	True	NA	-1	True	AATAAA	-19	NA	65006687	64990355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_64993415_65006540
transcript_86167.known	chr7	-	1729	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	NA	False	NA	NA	False	AATAAA	-34	NA	65006743	65003668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_65005195_65006540
transcript_86168.known	chr7	-	358	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCACCAAGCTATG	0	True	NA	-17	True	ATTAAA	-28	NA	65006659	65006083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_65006323_65006540
transcript_86169.known	chr7	+	2238	11	FSM	ENSG00000234585.6	ENST00000426828.5	2238	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.76933979345585	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	-2	True	NA	NA	False	AATAAA	-18	NA	65038359	65074713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65038566_65064998_65065134_65066252_65066427_65066944_65067051_65068455_65068611_65068708_65068791_65069660_65069758_65070345_65070485_65070908_65071043_65073440_65073515_65073777
transcript_8617.known	chr1	-	712	11	FSM	ENSG00000234741.9	ENST00000449589.6	827	11	0	115	0	18	multi-exon	FALSE	canonical	3	1580	junction_10	451.16543528954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGCTCAAGTGATCCTC	-2	True	NA	-127	True	NA	NA	NA	173867989	173864015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866797_173866990_173867044_173867959
transcript_86173.nnic	chr7	+	1489	6	NNC	ENSG00000282381.2	novel	1130	4	NA	NA	-9	32757	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	4.57820925690384	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACTGCATATGGGAA	-33	True	NA	NA	False	AATAAA	-18	NA	65269349	65350695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_65269539_65303528_65303803_65313569_65313754_65317446_65317567_65338531_65338617_65350058
transcript_86176.known	chr7	+	3165	4	FSM	ENSG00000146757.14	ENST00000328747.12	3165	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	6.94422221866655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTATTCGATGAAG	1	True	NA	4	True	ATTAAA	-21	NA	65373854	65401136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65374001_65387901_65388029_65388805_65388902_65398340
transcript_86179.known	chr7	+	2957	3	FSM	ENSG00000146757.14	ENST00000450302.2	2957	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	43	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	-4	True	NA	28	True	AATAAA	-19	NA	65373880	65401081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65374001_65388805_65388902_65398340
transcript_86182.known	chr7	+	2947	2	FSM	ENSG00000146757.14	ENST00000431504.1	2947	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGCTAAGACTAGTGT	19	False	NA	-7	True	ATTAAA	-10	NA	65373838	65401125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65374001_65398340
transcript_86185.nnic	chr7	-	1991	4	NNC	ENSG00000272693.5	novel	1962	8	NA	NA	-6	-22562	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.97775303139718	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCTGCAGGCTTTGCT	-10	True	NA	NA	False	AATAAA	-28	NA	65750944	65720423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_65722125_65726770_65726945_65727054_65727109_65750882
transcript_86192.nic	chr7	+	2233	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	13	3	-1	0	multi-exon	FALSE	canonical	3	24	junction_1	26.1091937830336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	-19	True	NA	NA	False	AATAAA	-18	NA	65751049	65764222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_86193.known	chr7	+	1317	11	FSM	ENSG00000228409.7	ENST00000688478.1	2258	11	73	868	0	18	multi-exon	FALSE	canonical	2	4	junction_2	29.7112773202365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	20	False	NA	NA	False	NA	NA	NA	65751141	65763354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65751279_65752163_65752311_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_86195.known	chr7	+	1170	10	FSM	ENSG00000228409.7	ENST00000688735.1	2135	10	94	871	0	18	multi-exon	FALSE	canonical	3	24	junction_1	24.7720471698981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	20	False	NA	NA	False	NA	NA	NA	65751141	65763354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_86199.known	chr7	+	5895	3	FSM	ENSG00000196715.7	ENST00000648179.1	5895	3	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTTTCATGGAGCT	-5	True	NA	12	True	AATAAA	-20	NA	65873269	65959562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_65873566_65948670_65948781_65954073
transcript_86202.known	chr7	-	2199	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	91.7428133515258	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	10	True	NA	-12	True	AATAAA	-29	NA	65982213	65960683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_86206.nic	chr7	-	2056	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_6	48.5052574470026	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	-14	True	NA	-26	True	AATAAA	-38	NA	65982237	65960697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_86226.known	chr7	+	2140	17	FSM	ENSG00000126522.17	ENST00000304874.14	2140	17	0	0	0	0	multi-exon	FALSE	canonical	2	124	junction_1	37.1481409359876	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAACTAGCCAAACTG	-9	True	NA	NA	False	ATTAAA	-24	NA	66075818	66093576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_86230.nic	chr7	+	1527	16	NIC	ENSG00000126522.17	novel	2140	17	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_12	58.8245602524055	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTTTCCTGC	NA	False	NA	9	True	AATAAA	-16	NA	66075749	66092954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_86233.known	chr7	+	1436	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_7	54.1509823446342	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	-6	True	NA	8	True	AATAAA	-15	NA	66075821	66092953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_86242.known	chr7	+	1388	15	FSM	ENSG00000126522.17	ENST00000362000.10	1388	15	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	58.184085067156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTTTCCTGCC	7	True	NA	10	True	AATAAA	-17	NA	66075936	66092955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_8625.known	chr1	-	822	11	FSM	ENSG00000234741.9	ENST00000436656.6	825	11	2	1	0	0	multi-exon	FALSE	canonical	3	1580	junction_10	426.353011013174	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-2	True	NA	-12	True	AATAAA	-14	NA	173867989	173863900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_86255.known	chr7	+	2774	6	FSM	ENSG00000241258.7	ENST00000395326.8	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	4.19523539268061	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	7	True	NA	18	True	AATAAA	-24	NA	66114846	66154568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207
transcript_86262.known	chr7	+	1393	5	FSM	ENSG00000241258.7	ENST00000338592.5	1393	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	27.5816968296006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGGTGATGGCAC	10	True	NA	NA	False	AATACA	-4	NA	66114849	66153289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66114971_66127703_66127741_66134279_66134375_66145442_66145501_66152207
transcript_8627.known	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	67	junction_4	917.109677192428	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-2	True	NA	-11	True	AATAAA	-15	NA	173867989	173863899	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_86270.known	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_13	33.0019528041734	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	-5	True	NA	-13	True	NA	NA	NA	66075888	66092932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_86271.known	chr7	+	1981	6	FSM	ENSG00000169902.15	ENST00000304842.6	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	25.0966133173383	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTAGTTACATGTTTT	-1	True	NA	18	True	AATAAA	-19	NA	66205333	66360443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66359894
transcript_86272.known	chr7	+	454	2	FSM	ENSG00000237310.3	ENST00000452565.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTCTGGTTTTTGGGG	58	False	NA	22	True	ATTAAA	-23	NA	66493785	66495472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66494022_66495254
transcript_86273.known	chr7	+	713	2	FSM	ENSG00000237310.3	ENST00000669130.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCTTCTGGTTTTTGG	-12	True	NA	20	True	ATTAAA	-21	NA	66493715	66495470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66494213_66495254
transcript_86275.nic	chr7	-	2110	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-34	22786	0	175	5prime_fragment	FALSE	canonical	3	38	junction_4	11.2583302491977	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	-8	True	NA	NA	False	ATTAAA	-40	NA	66592397	66553309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_86276.nic	chr7	-	1855	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-34	23041	0	-80	5prime_fragment	FALSE	canonical	3	38	junction_4	11.2583302491977	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGGATTTCATTTATT	-8	True	NA	0	True	TATAAA	-26	NA	66592397	66553564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_86277.nic	chr7	-	1654	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-34	23242	0	-281	5prime_fragment	FALSE	canonical	3	38	junction_4	11.2583302491977	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	-8	True	NA	-10	True	AATAAA	-17	NA	66592397	66553765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_86279.nic	chr7	-	1952	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-84	23003	-20	175	5prime_fragment	FALSE	canonical	3	58	junction_2	41.2148840428633	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	NA	False	NA	NA	False	ATTAAA	-40	NA	66592417	66553309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_86280.nic	chr7	-	2013	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-54	8459	0	175	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	-8	True	NA	NA	False	ATTAAA	-40	NA	66592397	66553309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_86281.nic	chr7	-	1838	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-54	8634	0	0	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAAGATAGGCACAA	-8	True	NA	80	True	NA	NA	NA	66592397	66553484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_86282.nic	chr7	-	1697	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-84	23258	-20	-80	5prime_fragment	FALSE	canonical	3	58	junction_2	41.2148840428633	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGGATTTCATTTATT	NA	False	NA	0	True	TATAAA	-26	NA	66592417	66553564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_86283.nic	chr7	-	1758	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-54	8714	0	-80	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGGATTTCATTTATT	-8	True	NA	0	True	TATAAA	-26	NA	66592397	66553564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_86284.nic	chr7	-	1496	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-84	23459	-20	-281	5prime_fragment	FALSE	canonical	3	58	junction_2	41.2148840428633	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	NA	False	NA	-10	True	AATAAA	-17	NA	66592417	66553765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_86285.nic	chr7	-	1557	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-54	8915	0	-281	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	-8	True	NA	-10	True	AATAAA	-17	NA	66592397	66553765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_86287.nic	chr7	-	1855	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-20	7887	-20	175	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	NA	False	NA	NA	False	ATTAAA	-40	NA	66592417	66553309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_86288.nic	chr7	-	1680	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-20	8062	-20	0	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAAGATAGGCACAA	NA	False	NA	80	True	NA	NA	NA	66592417	66553484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_86289.nic	chr7	-	1600	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-20	8142	-20	-80	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGGATTTCATTTATT	NA	False	NA	0	True	TATAAA	-26	NA	66592417	66553564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_86290.nic	chr7	-	1399	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-20	8343	-20	-281	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTTGGTAGT	NA	False	NA	-10	True	AATAAA	-17	NA	66592417	66553765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_86291.nic	chr7	-	1532	2	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	38	26699	4	1017	5prime_fragment	FALSE	canonical	3	150	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAAATAAAAAGAAAAG	-11	True	NA	NA	False	ATTAAA	-15	NA	66592359	66572121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_66573551_66592256
transcript_86292.known	chr7	+	4869	4	FSM	ENSG00000243335.10	ENST00000639828.2	4869	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	8.48528137423857	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTGCTGTGCCTTTCT	2	True	NA	19	True	ATTAAA	-15	NA	66628880	66643047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66629209_66633274_66633445_66638252_66638432_66638855
transcript_86295.known	chr7	+	3733	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	22.1468818346963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	0	True	NA	17	True	AATAAA	-29	NA	66740732	66811464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_86298.known	chr7	+	2654	10	FSM	ENSG00000154710.18	ENST00000607882.5	2654	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.7186410345476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTTTGGAATAATTTTA	-1	True	NA	NA	False	ATTAAA	-15	NA	66682163	66809662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66682259_66712166_66712225_66739995_66740793_66771882_66772079_66775226_66775394_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_86299.nnic	chr7	+	1142	4	Fusion	ENSG00000226824.8_ENSG00000154710.18	novel	508	4	NA	NA	-12	30947	multi-exon	FALSE	canonical	0	0	junction_2	3.74165738677394	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGTCATGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	66654500	66716639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_66654627_66700768_66700850_66712166_66712225_66715762
transcript_86301.known	chr7	+	4229	7	FSM	ENSG00000106609.16	ENST00000341567.8	4229	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_6	17.1407571465077	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCGCGTCTTCTTCC	-15	True	NA	19	True	AATAAA	-14	NA	66921224	66958551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
transcript_86303.known	chr7	+	3330	16	FSM	ENSG00000198874.14	ENST00000359626.10	3330	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	20.5875906528396	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCATGAGTTTTTTA	-3	True	NA	13	True	AATAAA	-18	NA	66996832	67239514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67055834_67055888_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_86304.known	chr7	+	3255	15	FSM	ENSG00000198874.14	ENST00000361660.8	3255	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	36.4020211369801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCAGCATGAGTTTTT	17	True	NA	11	True	AATAAA	-16	NA	66996852	67239512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_86306.nic	chr7	+	1151	7	ISM	ENSG00000198874.14	ENST00000359626.10	3330	16	-31	214502	-18	7131	5prime_fragment	FALSE	canonical	3	106	junction_3	14.2594997574716	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGGTACCGTTAC	1397	False	NA	NA	False	NA	NA	NA	66996801	67025012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899
transcript_86308.known	chr7	-	1613	5	FSM	ENSG00000126524.11	ENST00000246868.7	1613	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	15.1719313206988	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTCCTAACTCCCTTTC	11	True	NA	91	True	AATAAA	-42	NA	66995586	66987679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
transcript_86312.known	chr7	-	1531	5	FSM	ENSG00000126524.11	ENST00000414306.5	1531	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	118.165932061656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGTATGTAATCAAT	21	True	NA	27	True	AATATA	-13	NA	66995576	66987743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994219_66994342_66995289
transcript_86315.nic	chr7	-	2360	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	6	-1734	0	1734	multi-exon	FALSE	canonical	3	26	junction_4	3.11247489949718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAGAAAGTATCATG	NA	False	NA	NA	False	NA	NA	NA	67302468	67290693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_86318.nic	chr7	-	622	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	6	4	0	0	multi-exon	FALSE	canonical	3	26	junction_4	3.11247489949718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	67302468	67292431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_86328.known	chr7	+	2143	5	FSM	ENSG00000106610.16	ENST00000416602.6	2143	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	21.4592637338749	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAAACTTATCTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	67302620	67321526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_67302886_67305986_67306084_67308934_67309140_67309563_67309716_67320102
transcript_86333.nnic	chr7	+	895	4	FSM	ENSG00000106610.16	ENST00000687534.1	890	4	-5	0	-3	0	multi-exon	FALSE	canonical	1	5	junction_1	49.3040453602835	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGCTCTAAGT	-24	True	NA	21	True	ATTAAA	-43	NA	67302649	67320404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_67302886_67308934_67309140_67309563_67309716_67320102
transcript_86334.known	chr7	-	8571	2	FSM	ENSG00000183166.11	ENST00000405452.3	8571	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGATTCCATTCATTA	NA	False	NA	-7	True	AATAAA	-18	NA	71810495	71779491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_71787903_71810335
transcript_86339.nnic	chr7	-	2053	7	NNC	ENSG00000277149.5	novel	3117	14	NA	NA	92087	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_3	14.613540144522	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-1	True	NA	-8	True	AATAAA	-18	NA	72736087	72574512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72735944
transcript_86342.known	chr7	-	3117	14	FSM	ENSG00000277149.5	ENST00000620995.5	3117	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	37.4717250405528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-15	True	NA	-8	True	AATAAA	-18	NA	72828200	72574512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72744483_72744602_72777415_72777534_72802399_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_86343.known	chr7	+	737	5	FSM	ENSG00000225648.6	ENST00000453858.2	1621	5	189	695	149	63	multi-exon	FALSE	canonical	3	32	junction_1	28.8389927008556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCATCAGTCTCTTC	183	False	NA	NA	False	NA	NA	NA	72829655	72836701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763_72833929_72836576
transcript_86346.nic	chr7	+	1520	4	FSM	ENSG00000225648.6	ENST00000685034.1	1489	4	-34	3	1	0	multi-exon	FALSE	canonical	3	46	junction_1	24.3903441732356	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	72829425	72837376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72831601_72831799_72833763_72833929_72836576
transcript_86347.nic	chr7	+	2498	4	NIC	ENSG00000225648.6	novel	1621	5	NA	NA	9	0	intron_retention	FALSE	canonical	3	50	junction_1	22.553639765383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	5	True	NA	NA	False	AATAAA	-22	NA	72829477	72837376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_72830814_72831601_72831799_72833763_72833929_72836576
transcript_86348.known	chr7	+	733	3	FSM	ENSG00000225648.6	ENST00000415772.5	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTGTAAACAGTCAGA	17	True	NA	NA	False	AATAAA	-17	NA	72829489	72834005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72831601_72831799_72833763
transcript_86349.known	chr7	+	618	3	FSM	ENSG00000225648.6	ENST00000423945.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGGTTCTTTGGAAG	NA	False	NA	NA	False	AATAAA	-13	NA	72829424	72836638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_72829784_72831601_72831799_72836576
transcript_86352.known	chr7	-	1647	12	FSM	ENSG00000106133.18	ENST00000485741.6	1647	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	172.318607466921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	10	False	NA	-8	True	AATAAA	-18	NA	72954720	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72948598_72948667_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_86358.nnic	chr7	-	1828	11	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-31	0	intron_retention	FALSE	canonical	3	43	junction_9	166.461076531422	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954751	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_86363.nnic	chr7	-	2509	10	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-31	0	intron_retention	FALSE	canonical	3	66	junction_3	163.548158045268	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954751	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_86380.known	chr7	-	1180	7	FSM	ENSG00000106133.18	ENST00000444583.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	182.059514078959	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	17	False	NA	-3	True	AATAAA	-23	NA	72954713	72948292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_86384.nnic	chr7	-	1492	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-31	0	intron_retention	FALSE	canonical	3	40	junction_5	171.209180049825	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954751	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
transcript_86389.nnic	chr7	-	1383	6	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	27	0	intron_retention	FALSE	canonical	3	148	junction_2	155.494565821446	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954763	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954624
transcript_86391.nnic	chr7	-	1303	6	NNC	ENSG00000106133.18	novel	1789	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	56	junction_2	179.34369238978	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954763	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72948809_72948891_72949103_72949304_72949492_72949845_72949962_72950057_72950197_72954624
transcript_86392.nic	chr7	-	1295	6	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	89	junction_2	170.259331609166	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954763	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_86394.nic	chr7	-	1505	5	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	171	junction_4	141.68869926709	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954763	72948297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72954624
transcript_86397.known	chr7	-	708	1	FSM	ENSG00000272843.1	ENST00000608799.1	708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGTCTGCCAATACACT	NA	False	NA	NA	False	AATAAA	-16	NA	72925125	72924417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72924400_72925100
transcript_86399.nnic	chr7	-	1477	10	NNC	ENSG00000174353.17	novel	1067	8	NA	NA	-16	3769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.7575988543909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCACCTGTCTTCCTTTT	3	False	NA	NA	False	AATAAA	-22	NA	73005938	72993289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_72993440_72998012_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_86405.known	chr7	-	2137	8	FSM	ENSG00000174353.17	ENST00000428423.5	2137	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	29.1204395571221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAATTAGGCCGGGCG	23	False	NA	NA	False	NA	NA	NA	73005918	72997058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_86407.known	chr7	-	1262	8	FSM	ENSG00000174353.17	ENST00000423834.6	1262	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	36.3295573148625	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	19	False	NA	NA	False	NA	NA	NA	73005922	72998489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005575
transcript_86408.nic	chr7	-	1161	8	NIC	ENSG00000174353.17	novel	1262	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	28.5478474116129	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	3	False	NA	NA	False	NA	NA	NA	73005938	72998489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_86409.nnic	chr7	+	879	7	NNC	ENSG00000229018.5	novel	1336	7	NA	NA	542	75	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	10.5948100502085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	73006082	73021178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_73006175_73009443_73009584_73011468_73011556_73011721_73011835_73013091_73013278_73016328_73016418_73021006
transcript_86410.known	chr7	+	1336	7	FSM	ENSG00000229018.5	ENST00000506558.2	1336	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	10.1885011437186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73005540	73021103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73006175_73009443_73009584_73011468_73011556_73011731_73011835_73013091_73013278_73016328_73016418_73021006
transcript_86413.nic	chr7	-	1132	7	NIC	ENSG00000174353.17	novel	1262	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	35.5980648662567	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	25	False	NA	NA	False	NA	NA	NA	73005916	72998489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005575
transcript_86414.nic	chr7	-	1037	7	ISM	ENSG00000174353.17	ENST00000428423.5	2137	8	-20	1431	-16	0	5prime_fragment	FALSE	canonical	3	61	junction_4	21.0508643264092	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	3	False	NA	NA	False	NA	NA	NA	73005938	72998489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_86416.nic	chr7	-	1424	7	NIC	ENSG00000174353.17	novel	897	7	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	40	junction_4	30.5705013952267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGATGGAGAA	3	False	NA	NA	False	NA	NA	NA	73005938	72998490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_86417.known	chr7	-	897	7	FSM	ENSG00000174353.17	ENST00000569650.1	897	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	43.5025542034284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACAGATGGAG	156	False	NA	NA	False	NA	NA	NA	73005785	72998492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72998791_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_86422.known	chr7	-	1716	6	FSM	ENSG00000174353.17	ENST00000448173.5	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	33.1746891469988	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	26	False	NA	NA	False	NA	NA	NA	73005915	72998483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_86428.nic	chr7	-	1615	5	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	61	junction_2	23.847169643377	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	3	False	NA	NA	False	NA	NA	NA	73005938	72998483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_86430.nic	chr7	-	2237	5	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	40	junction_2	32.8519405819504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	3	False	NA	NA	False	NA	NA	NA	73005938	72998483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999551_72999760_73000482_73003020_73003138_73003644_73003731_73005692
transcript_86433.nic	chr7	-	1818	4	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	61	junction_1	24.3629956194955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGATGGAGAA	3	False	NA	NA	False	NA	NA	NA	73005938	72998490	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_72999860_73003020_73003138_73003644_73003731_73005692
transcript_86437.known	chr7	+	3609	24	FSM	ENSG00000233369.7	ENST00000544802.5	3609	24	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_21	565.57864375207	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	-2	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
transcript_86440.nnic	chr7	-	1598	11	NNC	ENSG00000130305.17	novel	2336	10	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	165.729297349624	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	NA	False	NA	-7	True	AATAAA	-22	NA	73308869	73303224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_73303530_73303599_73303741_73303825_73303915_73303986_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_86445.known	chr7	-	1602	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	160.206887846872	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTACGATAGATCACAGT	-3	True	NA	-17	True	AATAAA	-12	NA	73308816	73303234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_86446.known	chr7	-	2286	9	FSM	ENSG00000130305.17	ENST00000471461.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	182.388321994584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-3	True	NA	-7	True	AATAAA	-22	NA	73308816	73303224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304405_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73308554_73308697
transcript_86448.known	chr7	-	1672	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_7	52.9691832578151	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	7	True	NA	-12	True	AATAAA	-17	NA	73308806	73303229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_86456.nic	chr7	-	1725	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	313	36203	313	-15304	5prime_fragment	FALSE	canonical	3	18	junction_5	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAAAGAAATGCTT	-6	True	NA	55	True	AAAAAG	-26	NA	73521965	73477767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_86457.known	chr7	-	1638	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	119.643804687079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAATTAAACT	752	False	NA	-41	True	NA	NA	NA	73557251	73536387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
transcript_86458.known	chr7	-	1663	6	FSM	ENSG00000106635.8	ENST00000223368.7	1663	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	31.4922212617656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	-25	True	NA	-9	True	ATTAAA	-15	NA	73557690	73536355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557486
transcript_86459.known	chr7	-	653	5	FSM	ENSG00000106635.8	ENST00000464288.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	156.787276269473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTTATTGCATTCTGG	-8	True	NA	NA	False	NA	NA	NA	73557241	73537265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557040
transcript_86463.known	chr7	-	4344	7	FSM	ENSG00000106638.18	ENST00000305632.11	4344	7	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_2	16.7199149386459	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTATAGCCTATTT	29	True	NA	NA	False	TTTAAA	-1	NA	73578579	73567536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_86464.known	chr7	-	2209	7	FSM	ENSG00000106638.18	ENST00000450285.5	2209	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	65.3624509944356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	18	True	NA	-52	True	AATAAA	-28	NA	73578590	73569659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573960_73574123_73574382_73574514_73578419
transcript_86465.known	chr7	-	3252	17	FSM	ENSG00000009950.16	ENST00000313375.8	3252	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	13.0240162776311	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTGTTGGTGTGCT	-2	True	NA	-18	True	AATAAA	-14	NA	73624522	73593201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73593984_73594273_73594404_73595636_73595761_73595841_73595970_73596152_73596273_73596363_73596480_73596638_73596790_73596864_73596933_73597181_73597714_73599525_73599696_73605687_73605769_73605909_73606112_73606973_73607019_73607330_73607421_73607589_73607673_73616070_73616178_73624199
transcript_86473.known	chr7	+	1201	12	FSM	ENSG00000071462.12	ENST00000265758.7	1201	12	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_10	69.2246313589091	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	4	True	NA	6	True	AATAAA	-16	NA	73683596	73698212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_86474.known	chr7	+	1219	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	316.623714192239	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	33	False	NA	2	True	AATAAA	-12	NA	73683625	73698208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
transcript_86475.known	chr7	+	1260	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	250.54515767234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	33	False	NA	NA	False	NA	NA	NA	73683625	73698104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_86477.known	chr7	-	1418	6	FSM	ENSG00000106077.19	ENST00000222800.8	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	42.9818566374232	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	3	True	NA	-11	True	AATAAA	-16	NA	73738802	73736093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738464_73738645
transcript_86482.known	chr7	-	1277	5	FSM	ENSG00000106077.19	ENST00000395147.9	1277	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	131.913797610409	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	7	True	NA	-11	True	AATAAA	-16	NA	73738832	73736093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73736928_73737111_73737561_73737736_73738327_73738464_73738645
transcript_86484.known	chr7	-	890	4	FSM	ENSG00000106077.19	ENST00000458339.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	163.882749414194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTAGGCAACAGAGCA	30	False	NA	NA	False	NA	NA	NA	73738823	73736289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73737561_73737736_73738327_73738464_73738645
transcript_86485.known	chr7	-	1562	5	FSM	ENSG00000106077.19	ENST00000497897.5	1562	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	134.127737623506	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-1	True	NA	-11	True	AATAAA	-16	NA	73738781	73736093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73736692_73736928_73737111_73737220_73737736_73738332_73738464_73738645
transcript_86486.known	chr7	+	662	4	FSM	ENSG00000225969.2	ENST00000427153.2	662	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGCCTGTCTGAGTC	NA	False	NA	NA	False	ATTAAA	-38	NA	73735037	73736158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73735091_73735240_73735500_73735727_73735849_73735929
transcript_86487.known	chr7	+	1695	1	FSM	ENSG00000189143.10	ENST00000340958.4	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCTCTGATTTCA	-2	True	NA	13	True	AATAAA	-24	NA	73830995	73832690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_73831000_73832700
transcript_86488.known	chr7	-	922	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	10.36532681588	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	8	True	NA	-5	True	ATTAAA	-16	NA	73842516	73834589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
transcript_8649.known	chr1	-	979	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	2	0	0	multi-exon	FALSE	canonical	3	1580	junction_9	485.623793832018	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	0	True	NA	-12	True	AATAAA	-14	NA	173867987	173863900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_86491.known	chr7	-	539	5	FSM	ENSG00000165171.11	ENST00000458679.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.092206477511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGATGTGGGAAGGCC	8	True	NA	NA	False	AATACA	-38	NA	73842516	73834914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_73835081_73840030_73840121_73841069_73841199_73842017_73842145_73842489
transcript_86503.known	chr7	+	2563	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_4	1327.37946722104	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	7	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
transcript_86510.known	chr7	+	2503	6	FSM	ENSG00000106682.16	ENST00000353999.6	2503	6	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_1	336.836221330189	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	7	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_86514.known	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_1	1395.73090171422	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	7	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_86516.known	chr7	+	2698	7	FSM	ENSG00000106682.16	ENST00000678815.1	2698	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1614.9734431941	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAGCTGCTCATGGA	9	True	NA	NA	False	AATAAA	-45	NA	74174357	74197122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74174443_74178655_74178827_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_86523.known	chr7	-	1685	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_7	136.578365783165	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGACCATGTGAAGCC	-2	True	NA	-25	True	AATAAA	-23	NA	74254399	74231501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_86524.known	chr7	-	1576	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_6	370.175567288393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCATGTGAAGCCTCG	8	True	NA	-22	True	AATAAA	-26	NA	74254389	74231498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_86525.known	chr7	-	1029	2	FSM	ENSG00000287815.2	ENST00000661689.2	1050	2	21	0	21	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGAGACCTTGTCTCA	24	False	NA	NA	False	NA	NA	NA	74289286	74280746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74281551_74289061
transcript_86527.known	chr7	+	3430	27	FSM	ENSG00000006704.11	ENST00000265755.7	3430	27	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_18	24.4167768979208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAGAGTG	NA	False	NA	NA	False	AGTAAA	-5	NA	74453789	74602590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555392_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_86528.known	chr7	+	3284	27	FSM	ENSG00000006704.11	ENST00000424337.7	3284	27	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	20.8939276589576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGCCTTTACTTTTA	-11	True	NA	NA	False	AGTAAA	-20	NA	74453905	74602605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555437_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_86529.known	chr7	+	865	2	FSM	ENSG00000263001.8	ENST00000652150.1	865	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCTAATATTTATATA	-2	True	NA	NA	False	ATTAAA	-23	NA	74650230	74651491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_74650797_74651192
transcript_86538.nic	chr7	-	1676	8	NIC	ENSG00000277072.5	novel	1017	10	NA	NA	-12	2	intron_retention	FALSE	canonical	3	24	junction_4	27.0524811190005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAGCCCCATTGTCC	NA	False	NA	-23	True	AGTAAA	-18	NA	74890585	74882160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74883042_74883348_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86539.known	chr7	-	2130	8	FSM	ENSG00000277072.5	ENST00000426587.5	2130	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	26.5160713684423	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGAAGCCCCATTGT	NA	False	NA	-25	True	AGTAAA	-16	NA	74890610	74882162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_86541.nic	chr7	-	981	7	ISM	ENSG00000289346.1	ENST00000625377.3	4346	23	0	87013	0	-87013	5prime_fragment	FALSE	canonical	3	24	junction_3	27.2605738914075	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGGAGAAGGATG	NA	False	NA	NA	False	NA	NA	NA	74890585	74883162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86546.nic	chr7	-	1795	6	NIC	ENSG00000277072.5	novel	1017	10	NA	NA	-13	250	intron_retention	FALSE	canonical	3	14	junction_5	26.7656496278346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGGAGAAGGATG	NA	False	NA	NA	False	NA	NA	NA	74890586	74883162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890270
transcript_86547.known	chr7	-	1026	6	FSM	ENSG00000277072.5	ENST00000622215.1	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	30.4276190327143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCCCATTGTGTAGGCC	-1	True	NA	NA	False	NA	NA	NA	74890566	74883794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_86549.nic	chr7	-	1244	6	NIC	ENSG00000277072.5	novel	2130	8	NA	NA	-12	249	intron_retention	FALSE	canonical	3	24	junction_2	29.5472502950782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAAATGGAGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	74890585	74883163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86552.known	chr7	-	1047	5	FSM	ENSG00000277072.5	ENST00000611766.4	1047	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	29.978117018919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCCTCTGCTGTGG	-1	True	NA	NA	False	NA	NA	NA	74890566	74883766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_86553.nic	chr7	-	1553	5	NIC	ENSG00000277072.5	novel	1026	6	NA	NA	-12	250	intron_retention	FALSE	canonical	3	24	junction_1	32.5192250830182	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGGAGAAGGATG	NA	False	NA	NA	False	NA	NA	NA	74890585	74883162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86554.nic	chr7	-	1761	4	NIC	ENSG00000277072.5	novel	1026	6	NA	NA	-12	248	intron_retention	FALSE	canonical	3	27	junction_1	29.9369708257569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACAAATGGAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	74890585	74883164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_74884525_74887682_74887800_74888311_74888398_74890387
transcript_86562.nnic	chr7	+	767	6	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3364	7914	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	7.95989949685296	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	74890751	74905749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886_74900976_74905577
transcript_86572.known	chr7	-	2309	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	16.1133485036475	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	15	True	NA	-27	True	AATAAA	-28	NA	75073802	75042182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_86574.known	chr7	-	3605	24	FSM	ENSG00000277053.4	ENST00000622829.4	3605	24	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_7	548.630382667957	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	0	True	NA	NA	False	AATAAA	-14	NA	75237696	75185395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75186528_75187219_75187296_75188074_75188117_75189214_75189257_75190538_75190568_75192046_75192231_75192898_75192981_75193902_75193984_75194656_75194713_75196612_75196797_75196973_75197040_75197947_75198050_75199650_75199726_75200120_75200180_75201120_75201305_75202541_75202614_75207955_75208015_75209375_75209560_75210527_75210600_75212078_75212138_75213405_75213590_75215755_75215822_75217153_75217265_75237292
transcript_86597.nic	chr7	+	1112	8	FSM	ENSG00000205583.14	ENST00000684904.1	1100	8	-19	7	11	-7	multi-exon	FALSE	canonical	3	38	junction_3	29.7787761703546	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGATGGAGAA	NA	False	NA	NA	False	NA	NA	NA	75359211	75366623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75359410_75361373_75361460_75361971_75362089_75364632_75364757_75365254_75365354_75365563_75365644_75365951_75366060_75366323
transcript_86599.nnic	chr7	+	1692	8	FSM	ENSG00000205583.14	ENST00000687422.1	1711	8	11	8	11	-8	multi-exon	FALSE	canonical	3	36	junction_7	30.1371016847869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAGCCCCATTGTCC	NA	False	NA	3	True	AGTAAA	-18	NA	75359211	75367638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254_75365354_75365563_75365644_75365951_75366060_75366323_75366439_75366749
transcript_866.known	chr1	-	2201	6	FSM	ENSG00000162496.9	ENST00000616661.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	30.4893424002552	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	5	True	NA	-4	True	AATAAA	-19	NA	12618210	12567909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
transcript_86610.nnic	chr7	+	988	7	ISM	ENSG00000205583.14	ENST00000687422.1	1711	8	11	1023	11	-7	5prime_fragment	FALSE	canonical	3	60	junction_3	22.3960562004415	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGATGGAGAA	NA	False	NA	NA	False	NA	NA	NA	75359211	75366623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254_75365354_75365563_75365644_75365951_75366060_75366323
transcript_86612.nnic	chr7	+	1093	7	NNC	ENSG00000205583.14	novel	1100	8	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	17	junction_1	36.6924152016917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGATGGAGAA	NA	False	NA	NA	False	NA	NA	NA	75359223	75366623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_75359527_75361373_75361460_75361971_75362089_75365254_75365354_75365563_75365644_75365951_75366060_75366323
transcript_86627.nic	chr7	+	1268	6	FSM	ENSG00000223705.10	ENST00000689022.1	1269	6	-4	5	0	0	multi-exon	FALSE	canonical	3	121	junction_4	112.718410208803	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	17	True	AATAAA	-18	NA	75410349	75416787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
transcript_86629.nic	chr7	+	1329	6	FSM	ENSG00000223705.10	ENST00000691741.1	1283	6	-53	7	-25	0	multi-exon	FALSE	canonical	3	103	junction_4	117.894868420979	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	17	True	AATAAA	-18	NA	75410296	75416787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
transcript_8663.known	chr1	-	483	9	FSM	ENSG00000234741.9	ENST00000452197.5	483	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1008.74655358767	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	4	True	NA	-12	True	AATAAA	-14	NA	173867983	173863900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_86630.nnic	chr7	-	741	6	NNC	ENSG00000278416.1	novel	1128	7	NA	NA	540	78	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	10.9434912162436	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	75359010	75343936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75344109_75348696_75348786_75351835_75352022_75353568_75353656_75355548_75355689_75358943
transcript_86633.nnic	chr7	+	1561	5	ISM	ENSG00000205583.14	ENST00000687422.1	1711	8	11	1022	11	-6	intron_retention	FALSE	canonical	3	60	junction_3	25.2524751262129	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	75359211	75366624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254_75365354_75365563
transcript_86634.nnic	chr7	+	1666	5	NNC	ENSG00000205583.14	novel	1100	8	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	17	junction_1	43.8434715778758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	75359223	75366624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_75359527_75361373_75361460_75361971_75362089_75365254_75365354_75365563
transcript_86635.nic	chr7	+	1476	5	FSM	ENSG00000223705.10	ENST00000687621.1	1476	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	89.5610825079733	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	17	True	AATAAA	-18	NA	75410351	75416787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_86637.nnic	chr7	-	653	5	NNC	ENSG00000278416.1	novel	1128	7	NA	NA	537	76	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.2805141726785	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCTCCCCTGGGTCCGG	NA	False	NA	NA	False	AATAAA	-17	NA	75359013	75343938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75344109_75351835_75352022_75353568_75353656_75355548_75355689_75358943
transcript_86638.nnic	chr7	+	1772	4	ISM	ENSG00000205583.14	ENST00000687422.1	1711	8	11	1021	11	-5	intron_retention	FALSE	canonical	3	60	junction_3	25.1042271783503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACAGATGGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	75359211	75366625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254
transcript_86640.nnic	chr7	+	1877	4	NNC	ENSG00000205583.14	novel	1100	8	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	17	junction_1	40.5325657822064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACAGATGGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	75359223	75366625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_75359527_75361373_75361460_75361971_75362089_75365254
transcript_86641.known	chr7	-	5867	15	FSM	ENSG00000272391.6	ENST00000615331.5	5867	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	52.2121359729435	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-2	True	NA	NA	False	AATAAA	-19	NA	75486299	75416785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75485863
transcript_86644.known	chr7	-	503	2	FSM	ENSG00000127946.17	ENST00000479835.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCCTGCCCTCAAAAAAA	14	True	NA	NA	False	NA	NA	NA	75738962	75733459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75733801_75738800
transcript_86648.nnic	chr7	-	568	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	8176	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	82.7566714329828	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	8062	False	NA	-11	True	AATAAA	-14	NA	75781720	75769537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75781670
transcript_86649.nnic	chr7	-	888	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1686	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	81.3428956127495	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	1572	False	NA	-11	True	AATAAA	-14	NA	75788210	75769537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75787840
transcript_86650.nnic	chr7	-	703	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1592	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_3	30.4740326617051	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	1478	False	NA	-11	True	AATAAA	-14	NA	75788304	75769537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788119
transcript_86652.known	chr7	+	1831	5	FSM	ENSG00000005486.17	ENST00000454791.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	196.100101988755	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCTGCCTTTGTAT	3	True	NA	-26	True	NA	NA	NA	75879003	75888884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75879261_75881364_75881487_75881828_75882237_75883697_75883849_75887991
transcript_86655.known	chr7	+	1721	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	33.0689515339624	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCGTGTGCTTCCT	-17	True	NA	16	True	TATAAA	-20	NA	75879033	75888926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
transcript_86660.known	chr7	+	2446	16	FSM	ENSG00000127948.16	ENST00000461988.6	2446	16	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	45.6657420830977	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	-2	True	NA	26	True	AATAAA	-16	NA	75915154	75986855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158_75986242_75986336
transcript_86661.known	chr7	+	2532	15	FSM	ENSG00000127948.16	ENST00000394893.5	2532	15	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	46.6657677270076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	7	True	NA	26	True	AATAAA	-16	NA	75915163	75986855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158
transcript_86665.known	chr7	-	1398	12	FSM	ENSG00000189077.11	ENST00000493111.7	1398	12	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_6	19.3570197829117	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGGTTATTTAAAA	26	True	NA	2	True	AATACA	-22	NA	75994595	75986830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_86667.known	chr7	-	1161	12	FSM	ENSG00000189077.11	ENST00000439537.5	1161	12	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	62.2637684332079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGCGTGTGTGTTCTC	47	False	NA	-7	True	AATAAA	-17	NA	75994574	75986984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75987224_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_86668.known	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_9	15.8682072081253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-35	True	NA	-63	True	NA	NA	NA	75994656	75987040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_86674.known	chr7	+	1028	4	FSM	ENSG00000127948.16	ENST00000493973.1	1028	4	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	12.328828005938	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	3632	False	NA	26	True	AATAAA	-16	NA	75985569	75986855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_75985850_75985922_75986069_75986158_75986242_75986336
transcript_86678.nnic	chr7	-	1225	9	NNC	ENSG00000127952.17	novel	1415	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.5376286734776	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-38	True	NA	-5	True	NA	NA	NA	76048014	75996341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_75996600_76000889_76000956_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_86683.known	chr7	-	1147	9	FSM	ENSG00000127952.17	ENST00000431581.5	1147	9	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_8	58.1055074842308	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	23	True	NA	-72	True	NA	NA	NA	76047953	75996408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
transcript_86684.known	chr7	-	1411	9	FSM	ENSG00000127952.17	ENST00000359697.8	1411	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	75.7013044801739	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-24	True	NA	-5	True	NA	NA	NA	76048000	75996341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
transcript_86689.nic	chr7	-	1126	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	67.0303007936694	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-38	True	NA	-5	True	NA	NA	NA	76048014	75996341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_86691.nic	chr7	-	1135	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	61.7483371667379	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	-38	True	NA	-29	True	NA	NA	NA	76048014	75996365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_86694.known	chr7	-	953	7	FSM	ENSG00000127952.17	ENST00000340062.9	953	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	86.4073042180013	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-7	True	NA	-5	True	NA	NA	NA	76047983	75996341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047811
transcript_86695.nic	chr7	-	989	7	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	82.6184335094509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	-38	True	NA	-29	True	NA	NA	NA	76048014	75996365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_86696.known	chr7	+	2020	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	844.052421236927	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	-4	True	NA	16	True	AATAAA	-21	NA	76048084	76067506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_86699.known	chr7	+	648	2	FSM	ENSG00000146701.12	ENST00000461263.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCTCGCATTGCCTT	-38	True	NA	7	True	ATTAAA	-19	NA	76048050	76049047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76048227_76048575
transcript_86700.known	chr7	+	2170	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	0	0	0	0	multi-exon	FALSE	canonical	3	2397	junction_4	107.789653376379	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	17	True	NA	18	True	AATAAA	-23	NA	76048105	76067508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_86701.known	chr7	+	777	3	FSM	ENSG00000106211.10	ENST00000248553.7	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	1459	junction_1	608	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGGCCCAGGCCCTG	-4	True	NA	40	True	AATAAA	-17	NA	76302672	76304292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76303077_76303801_76303866_76303983
transcript_86702.known	chr7	+	527	3	FSM	ENSG00000106211.10	ENST00000429938.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1337.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCCCAGGCCCTGGTG	12	True	NA	43	True	AATAAA	-20	NA	76303576	76304295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76303728_76303801_76303866_76303983
transcript_86703.known	chr7	+	1483	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	14.2192651005599	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	-12	True	NA	NA	False	AATAAA	-15	NA	76397517	76442071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
transcript_86706.nic	chr7	-	2153	2	ISM	ENSG00000146700.9	ENST00000275560.4	2800	11	-27	13327	-27	-13327	5prime_fragment	FALSE	canonical	3	64	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCAATGAGGACATACA	-18	True	NA	NA	False	AAAAAG	-8	NA	76409724	76402663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_76404506_76409413
transcript_86708.known	chr7	+	2641	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	67.6493902411544	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	0	True	NA	16	True	AATAAA	-16	NA	76461708	76505991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_86711.nic	chr7	+	2531	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	32.9919556225827	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461677	76505991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_86714.nic	chr7	+	2372	9	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	45.5679437762996	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461671	76505991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_86715.nnic	chr7	+	1571	7	Fusion	ENSG00000243566.7_ENSG00000230305.2	novel	2250	6	NA	NA	-143	-4809	multi-exon	FALSE	non_canonical	0	0	junction_6	39.8538998509974	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	20	False	NA	NA	False	ATTAAA	-18	NA	76510381	76527883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_76510738_76510902_76511053_76511656_76511883_76513083_76513164_76513946_76514077_76515044_76515457_76527666
transcript_86717.nnic	chr7	+	1491	6	Fusion	ENSG00000243566.7_ENSG00000230305.2	novel	1041	5	NA	NA	-143	-4809	multi-exon	FALSE	non_canonical	0	0	junction_5	39.4380526902635	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	20	False	NA	NA	False	ATTAAA	-18	NA	76510381	76527883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_76510738_76510902_76511053_76511656_76511883_76513946_76514077_76515044_76515457_76527666
transcript_86719.nnic	chr7	-	1548	10	Fusion	ENSG00000146707.15_ENSG00000214243.3	novel	1528	7	NA	NA	-78032	0	multi-exon	FALSE	canonical	0	0	junction_9	22.7058484879019	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	76728929	76609985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76625521_76625684_76625999_76626216_76650397_76650577_76650755_76650883_76696973_76697074_76728743
transcript_86722.known	chr7	+	3384	18	FSM	ENSG00000127947.16	ENST00000248594.11	3384	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	63.8740109383809	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGTTGCCTTGGCTT	-14	True	NA	19	True	ATTAAA	-23	NA	77537294	77640069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77537646_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_86723.known	chr7	+	2316	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	67.917311826034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAGCTAGAAGACAC	-5	True	NA	NA	False	NA	NA	NA	77538034	77639280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_86725.nnic	chr7	-	1345	4	FSM	ENSG00000214293.10	ENST00000687850.1	768	4	-598	21	-588	0	multi-exon	FALSE	canonical	3	10	junction_3	57.7946556544999	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	NA	False	NA	-60	True	AATAAA	-16	NA	77696865	77683850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77695895_77696019_77696171
transcript_86726.known	chr7	-	3168	3	FSM	ENSG00000214293.10	ENST00000654794.2	3180	3	12	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	7	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGCTATCCAGTTTA	-14	True	NA	-11	True	AATAAA	-4	NA	77696265	77681580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77695895
transcript_86727.nnic	chr7	-	679	3	FSM	ENSG00000214293.10	ENST00000687769.1	641	3	-35	-3	-1	0	multi-exon	FALSE	canonical	2	5	junction_2	67	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	-17	True	NA	-60	True	AATAAA	-16	NA	77696268	77683850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77696117
transcript_86728.known	chr7	-	2856	3	FSM	ENSG00000214293.10	ENST00000663654.2	2875	3	19	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	59	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGGAGCTGTGAGAAAT	-4	True	NA	-37	True	NA	NA	NA	77696255	77681606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684252_77685201_77685329_77696171
transcript_86729.nic	chr7	-	983	3	FSM	ENSG00000214293.10	ENST00000690779.1	977	3	-6	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_1	62	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	-17	True	NA	-60	True	AATAAA	-16	NA	77696268	77683850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684334_77685201_77685329_77695895
transcript_86730.known	chr7	-	609	3	FSM	ENSG00000214293.10	ENST00000416650.5	609	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAAATTGTGTAGG	-11	True	NA	-152	True	AAAACA	-38	NA	77696262	77683942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77684334_77685201_77685329_77696171
transcript_86731.known	chr7	-	902	2	FSM	ENSG00000214293.10	ENST00000447009.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATCACATATACAGAAG	-2	True	NA	NA	False	ATTAAA	-37	NA	77696253	77684784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77685329_77695895
transcript_86734.known	chr7	+	6406	8	FSM	ENSG00000187257.16	ENST00000334955.13	6406	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	12.4178936069147	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTACTTTTGTAATT	12	True	NA	17	True	AATAAA	-21	NA	77696458	77783022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77697056_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
transcript_86741.nic	chr7	+	824	3	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-55	33544	-55	-23875	5prime_fragment	FALSE	canonical	3	76	junction_2	15	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAGAAAAAGAAAC	NA	False	NA	-21	True	ATTAAA	-9	NA	77696403	77749478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_77697056_77736409_77736527_77749423
transcript_86742.nic	chr7	+	693	2	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-55	46572	-55	-36903	5prime_fragment	FALSE	canonical	3	106	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAGAAAAAAAGAAACA	NA	False	NA	NA	False	ATTAAA	-19	NA	77696403	77736450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_77697056_77736409
transcript_86743.known	chr7	-	877	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACATGACTCTTGA	-30	True	NA	-11	True	AATAAA	-18	NA	77798434	77793727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_77794424_77798253
transcript_86744.known	chr7	+	4793	18	FSM	ENSG00000006576.16	ENST00000307305.12	4793	18	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_12	28.1740757916352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTTTTTTTTTTAATT	22	True	NA	19	True	AATAAA	-16	NA	77798804	77957225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
transcript_86747.known	chr7	+	1977	12	FSM	ENSG00000006576.16	ENST00000424760.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	16.0988680881299	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTGTTTT	30	True	NA	4	True	AATAAA	-15	NA	77798812	77940459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029
transcript_86752.known	chr7	+	1738	9	FSM	ENSG00000006576.16	ENST00000415251.6	1738	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	13.6565002837477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTACTCTTTTTGAGCT	20	True	NA	NA	False	AATAAA	-33	NA	77798887	77923392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622
transcript_86753.known	chr7	-	2013	9	FSM	ENSG00000187391.22	ENST00000628781.1	2013	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	11.9889271830302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	-13	True	NA	-21	True	AATAAA	-37	NA	78771080	78255788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
transcript_86756.nic	chr7	-	1123	4	ISM	ENSG00000187391.22	ENST00000628781.1	2013	9	-253	245695	-10	237	5prime_fragment	FALSE	canonical	3	49	junction_2	11.5566238822398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACATGAAATTCTGG	-23	True	NA	NA	False	TATAAA	-39	NA	78771333	78501483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_78501788_78521429_78521646_78627119_78627240_78770850
transcript_86760.known	chr7	+	10083	8	FSM	ENSG00000127955.17	ENST00000649796.2	10083	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	27.244171816357	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCATATTATTTTT	-14	True	NA	NA	False	AATAAA	-18	NA	80134830	80226181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_80135279_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_86763.known	chr7	+	3237	8	FSM	ENSG00000127955.17	ENST00000649922.1	3237	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.5403171165658	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTTAATAAATCCTAATA	8	True	NA	-24	True	AATGAA	-25	NA	80134852	80219362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_80135274_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_86764.known	chr7	+	1939	8	FSM	ENSG00000127955.17	ENST00000649214.1	1939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.5403171165658	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAACATTGCACAGACT	7	True	NA	9	True	AATAAA	-11	NA	80134851	80218032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_80135279_80188924_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_86765.known	chr7	-	7273	17	FSM	ENSG00000170381.14	ENST00000643230.2	7273	17	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_15	25.6514345359085	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCGTCTGGGGAGCATTT	4	True	NA	-1	True	AATAAA	-19	NA	83649139	83363237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_83368039_83385293_83385434_83386982_83387051_83392554_83392722_83394296_83394339_83396637_83396730_83400027_83400251_83402631_83402777_83405449_83405520_83405944_83406060_83407096_83407240_83408367_83408488_83418389_83418484_83466481_83466602_83469242_83469303_83490113_83490275_83648427
transcript_86771.known	chr7	-	2675	17	FSM	ENSG00000170381.14	ENST00000642232.1	2675	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	112.213924464614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGACGCATCATTAAAATG	4	True	NA	-45	True	ATTAAA	-36	NA	83648550	83371495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_83372288_83385293_83385434_83386982_83387051_83392554_83392722_83394296_83394339_83396637_83396730_83400027_83400251_83402631_83402777_83405449_83405520_83405944_83406060_83407096_83407240_83408367_83408488_83418389_83418484_83466481_83466602_83469242_83469303_83490113_83490275_83648427
transcript_86775.nnic	chr7	+	846	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	183	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	18	True	AATAAA	-18	NA	83459837	83465343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_+_83460267_83464926
transcript_86778.known	chr7	-	8113	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_10	16.3553078158132	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTGTGTAGCTCAGT	0	True	NA	1	True	AGTAAA	-20	NA	84194789	83955776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_868.nic	chr1	-	1855	4	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	202.809160433042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-8	True	NA	-4	True	AATAAA	-19	NA	12618223	12567909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_12568425_12572727_12572854_12580522_12580667_12617153
transcript_86801.known	chr7	+	3915	18	FSM	ENSG00000135164.19	ENST00000579677.5	3915	18	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_9	51.9850257918027	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	NA	False	NA	8	True	AATAAA	-17	NA	87152411	87196325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182055_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_86802.known	chr7	+	3702	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_9	32.889770814365	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	13	True	NA	8	True	AATAAA	-17	NA	87152452	87196325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_86806.nic	chr7	+	3624	17	NIC	ENSG00000135164.19	novel	3702	18	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	3	55	junction_16	51.3864038438185	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	NA	False	NA	8	True	AATAAA	-17	NA	87152385	87196325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87195030
transcript_86811.nnic	chr7	-	1122	5	NNC	ENSG00000135185.12	novel	1273	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	203.19694879599	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	87220597	87196159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220523
transcript_86812.known	chr7	-	1062	4	FSM	ENSG00000135185.12	ENST00000257637.8	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_3	39.2031744746377	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-6	True	NA	-3	True	AATAAA	-20	NA	87219732	87196159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425
transcript_86813.known	chr7	-	769	2	FSM	ENSG00000224046.3	ENST00000433446.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTGATAACTT	9	True	NA	-5	True	AATAAA	-15	NA	87152282	87151422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87151659_87151749
transcript_86816.known	chr7	-	1057	4	FSM	ENSG00000182165.19	ENST00000359941.11	1144	4	87	0	14	0	multi-exon	FALSE	canonical	1	2	junction_1	34.4125300177453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAATGATCTTCAGGT	55	False	NA	NA	False	NA	NA	NA	87345447	87325114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87329934_87330095_87341522_87341685_87345042
transcript_86817.nnic	chr7	-	636	4	NNC	ENSG00000182165.19	novel	1447	4	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.4996878890428	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTGAGTCCTAATT	-24	True	NA	-4	True	AATAAA	-18	NA	87345526	87325349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_87325445_87341522_87341685_87345042_87345200_87345304
transcript_86818.known	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	37.3303570242176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-13	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
transcript_86821.known	chr7	-	3150	3	FSM	ENSG00000182165.19	ENST00000661943.2	3168	3	18	0	6	0	multi-exon	FALSE	canonical	3	75	junction_2	15.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAACCTCACCCTTTG	-26	True	NA	NA	False	ATTAAA	-15	NA	87345528	87322942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87341522_87341685_87345042
transcript_86822.known	chr7	-	1241	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	0	6	0	multi-exon	FALSE	canonical	3	52	junction_2	27	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGTTTCTCTCTGG	-26	True	NA	NA	False	AATAAA	-12	NA	87345528	87324589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87325445_87341522_87341685_87345304
transcript_86824.known	chr7	+	3205	18	FSM	ENSG00000005469.12	ENST00000331536.8	3205	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	9.65136202446761	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGTGCTTTTTGA	-8	True	NA	4	True	AATAAA	-17	NA	87345663	87399794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205_87359331_87361389_87361572_87361727_87361853_87369375_87369485_87375631_87375726_87375827_87375954_87377348_87377451_87381909_87381994_87382073_87382182_87382412_87382544_87391588_87391713_87392565_87392645_87392729_87392824_87392947_87393068_87398523
transcript_86825.known	chr7	+	1213	4	FSM	ENSG00000005469.12	ENST00000412227.6	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	6.18241233033047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTTTATCTGTATC	-2	True	NA	NA	False	ATTAAA	-20	NA	87345692	87360116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205
transcript_86828.nic	chr7	+	2496	3	ISM	ENSG00000005469.12	ENST00000412227.6	1213	4	-54	8793	-25	-8793	5prime_fragment	FALSE	canonical	3	43	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	87345638	87351323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_87345768_87346339_87346431_87349047
transcript_86829.known	chr7	+	2064	11	FSM	ENSG00000105784.16	ENST00000394654.4	4063	11	217	1782	161	58	multi-exon	FALSE	canonical	1	1	junction_8	2.60768096208106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAACGGGAAAGTT	70	False	NA	NA	False	TTTAAA	-8	NA	87628614	87830514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87628946_87650821_87650938_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87807372_87807520_87816140_87816263_87829884
transcript_86830.known	chr7	+	2020	10	FSM	ENSG00000105784.16	ENST00000493037.5	2020	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	2.52884592816468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAATTTCATTTTTTC	39	False	NA	NA	False	NA	NA	NA	87628453	87830456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87628946_87650821_87650938_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87816140_87816263_87829884
transcript_86834.known	chr7	+	2342	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	117.679702568855	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	26	True	NA	5	True	AATAAA	-24	NA	87876533	87908373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_86839.known	chr7	+	3655	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	74.1449328975363	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTTCCATTGTAAATT	-15	True	NA	NA	False	AATAAA	-28	NA	87876492	87909553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_86841.known	chr7	+	2694	12	FSM	ENSG00000006634.8	ENST00000413643.5	2694	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	125.888905503724	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	1	True	NA	8	True	AATAAA	-27	NA	87876215	87908376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900281_87900350_87900763_87900879_87904291_87904417_87907187
transcript_86843.known	chr7	-	4056	12	FSM	ENSG00000075303.13	ENST00000341119.10	4056	12	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_3	7.74916684404585	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCTGTCAACATTT	12	True	NA	-5	True	AATAAA	-18	NA	87876360	87833567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860571_87860641_87876095
transcript_86853.nic	chr7	+	1353	11	ISM	ENSG00000006634.8	ENST00000265728.6	3655	12	-70	5143	-64	-2809	5prime_fragment	FALSE	canonical	3	186	junction_7	77.6304708217076	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTAATTAGTTTTAT	208	False	NA	NA	False	NA	NA	NA	87876422	87904410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291
transcript_86855.nnic	chr7	+	2423	11	NIC	ENSG00000006634.8	novel	2694	12	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_10	119.193288401655	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	208	False	NA	8	True	AATAAA	-27	NA	87876422	87908376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
transcript_86865.nic	chr7	+	770	6	ISM	ENSG00000006634.8	ENST00000431138.5	2342	12	-111	20359	-64	2831	5prime_fragment	FALSE	canonical	3	54	junction_2	155.535719370182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTATTTACTCAAGAA	208	False	NA	NA	False	AATAAA	-34	NA	87876422	87888014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982
transcript_86868.known	chr7	+	574	3	FSM	ENSG00000006634.8	ENST00000486925.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	45.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAAGGGCTATATCCT	-17	True	NA	NA	False	NA	NA	NA	87876582	87885183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052_87878226_87884978
transcript_86869.known	chr7	+	797	2	FSM	ENSG00000006634.8	ENST00000495067.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTGTCTGGACTAGT	-21	True	NA	NA	False	NA	NA	NA	87876486	87878557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_87876779_87878052
transcript_86870.known	chr7	-	1972	8	FSM	ENSG00000075142.14	ENST00000265729.7	1972	8	0	0	0	0	multi-exon	TRUE	canonical	3	2280	junction_3	169.939845299471	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCCTCATTTCACTA	14	True	NA	-6	True	AATAAA	-17	NA	88220038	88205114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
transcript_86879.known	chr7	-	588	4	FSM	ENSG00000075142.14	ENST00000488015.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	2456	junction_1	132.093401298728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTGCTGACTATCC	14	True	NA	NA	False	NA	NA	NA	88220038	88210554	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_88210926_88217121_88217192_88218858_88218943_88219975
transcript_86880.known	chr7	+	442	3	FSM	ENSG00000235436.11	ENST00000479881.1	442	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTCTTCTTCTAACGA	118	False	NA	NA	False	NA	NA	NA	90119538	90124163	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90119866_90122066_90122092_90124073
transcript_86881.known	chr7	+	1219	5	FSM	ENSG00000164647.9	ENST00000297205.7	1219	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	8.25757228245687	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATGTTTCTCTTTGTA	-11	True	NA	7	True	AATAAA	-16	NA	90154468	90164827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913_90162079_90164476
transcript_86882.known	chr7	+	3902	23	FSM	ENSG00000105792.19	ENST00000389297.8	3902	23	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	5.17323851124369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACTTCTCTTCTTTAAT	-1	True	NA	12	True	TATAAA	-20	NA	90245173	90311063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90245545_90255422_90255483_90258097_90258164_90261946_90262057_90265300_90265378_90268285_90268385_90271525_90271676_90271780_90271959_90273986_90274111_90277072_90277122_90277212_90277335_90279676_90279894_90282891_90283057_90286280_90286400_90288233_90288353_90297748_90297831_90299866_90300060_90303968_90304107_90304743_90304821_90306900_90307099_90307767_90307855_90309262_90309368_90310067
transcript_86889.nic	chr7	+	1467	2	ISM	ENSG00000105792.19	ENST00000485791.5	543	4	0	8828	0	-8828	5prime_fragment	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTAAGTGGGTTGA	4	True	NA	NA	False	TATAAA	-14	NA	90245194	90256539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_90245545_90255422
transcript_86891.nic	chr7	+	526	6	NIC	ENSG00000157224.16	novel	338	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	156.524758424985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTACTTTTACATTAT	-16	True	NA	NA	False	ATTAAA	-15	NA	90403434	90513383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_90403550_90405518_90405609_90466409_90466514_90479227_90479275_90494366_90494431_90513277
transcript_86892.known	chr7	+	338	5	FSM	ENSG00000157224.16	ENST00000483862.5	338	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	169.184810192878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTACTTTTACATTAT	7	False	NA	NA	False	ATTAAA	-15	NA	90403518	90513383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90403550_90405518_90405609_90479227_90479275_90494366_90494431_90513277
transcript_86893.known	chr7	+	3533	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	183.376358587711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	10	True	NA	38	True	ATTAAA	-17	NA	90403460	90415954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
transcript_86894.known	chr7	+	846	4	FSM	ENSG00000157224.16	ENST00000394604.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	189.504617357995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCTTATACTATTTATT	-3	True	NA	NA	False	NA	NA	NA	90403447	90413238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90403550_90405518_90405613_90412006_90412062_90412643
transcript_86895.known	chr7	+	3488	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	159	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	16	True	NA	38	True	ATTAAA	-17	NA	90403466	90415954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90403550_90405518_90405613_90412643
transcript_86896.known	chr7	+	7489	10	FSM	ENSG00000105793.16	ENST00000222511.11	7489	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	25.9277248053169	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTCTCGAAATATCTT	12	True	NA	20	True	AATAAA	-17	NA	90346715	90391453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86898.nic	chr7	+	1195	9	NIC	ENSG00000105793.16	novel	7489	10	NA	NA	3	109	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	45.066617356975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATGCTTAAAAACAAGG	NA	False	NA	17	True	ATTAAA	-22	NA	90346667	90385185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86899.known	chr7	+	6913	9	FSM	ENSG00000105793.16	ENST00000380058.7	6913	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	45.2905550308229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTAGTCAAGTGAATTC	3	True	NA	NA	False	AATAAA	-2	NA	90346706	90391013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_869.known	chr1	+	2027	4	FSM	ENSG00000204518.3	ENST00000376221.2	2027	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCGTCAGTGGTGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	12644084	12667076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_12644715_12651122_12651340_12661790_12661855_12665960
transcript_86900.known	chr7	+	775	8	FSM	ENSG00000105793.16	ENST00000417207.5	775	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	48.1765460762468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTCCAACATATCATCC	-9	True	NA	NA	False	AAAACA	-20	NA	90346694	90384937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86901.known	chr7	+	1740	8	FSM	ENSG00000105793.16	ENST00000257659.12	1740	8	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_2	47.4363160630403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAATATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	90346664	90385890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_90346775_90352815_90353010_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_86903.known	chr7	-	317	3	FSM	ENSG00000223969.7	ENST00000415965.5	317	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATCATTGCTACAT	1666	False	NA	2	True	AATAAA	-18	NA	90595748	90590618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_90590729_90591715_90591902_90595727
transcript_86904.known	chr7	-	450	3	FSM	ENSG00000223969.7	ENST00000441971.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGGAATCATTGCT	1524	False	NA	-2	True	AATAAA	-14	NA	90595890	90590622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_90590729_90591715_90591902_90595732
transcript_86905.known	chr7	-	1639	4	FSM	ENSG00000127989.14	ENST00000406735.6	1639	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	52.0917993119412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGAAGGGGGCCTGT	10	True	NA	NA	False	NA	NA	NA	91880692	91873321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_91874765_91876877_91876979_91880054_91880114_91880656
transcript_86906.known	chr7	-	554	3	FSM	ENSG00000127989.14	ENST00000442961.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	71.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACGTTCTCCTGAAT	12	True	NA	NA	False	NA	NA	NA	91880690	91874317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_91874765_91880054_91880114_91880642
transcript_86907.known	chr7	-	3941	3	FSM	ENSG00000127989.14	ENST00000351870.8	3941	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	15.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCGGCCATAGTGGTGC	0	True	NA	NA	False	NA	NA	NA	91880702	91870928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_91874765_91880054_91880114_91880656
transcript_86917.nic	chr7	+	1226	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-45	69937	-7	4824	5prime_fragment	TRUE	canonical	3	17	junction_3	4.95695759225642	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAGAAATACAGGAAA	NA	False	NA	NA	False	GATAAA	-18	NA	91940832	92000876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86918.nic	chr7	+	1279	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-45	69884	-7	4877	5prime_fragment	FALSE	canonical	3	17	junction_3	4.95695759225642	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAGAAGAAGAAAAGAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	91940832	92000929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86919.nic	chr7	+	1391	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-45	69772	-7	4989	5prime_fragment	FALSE	canonical	3	17	junction_3	4.95695759225642	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAATTAGAGCTGACTA	NA	False	NA	NA	False	AATAAA	-4	NA	91940832	92001041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86920.nic	chr7	+	2082	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-45	69081	-7	5680	5prime_fragment	FALSE	canonical	3	17	junction_3	4.95695759225642	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAATGCTGTGTTAGA	NA	False	NA	NA	False	GATAAA	-20	NA	91940832	92001732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86921.nic	chr7	+	2466	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-45	68697	-7	6064	5prime_fragment	FALSE	canonical	3	17	junction_3	4.95695759225642	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAGAAAAGGGTAC	NA	False	NA	21	True	AAAAAG	-21	NA	91940832	92002116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_86923.known	chr7	+	1356	7	FSM	ENSG00000127914.19	ENST00000394564.5	1356	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.28099317258495	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTGTCATTTATAA	58	False	NA	NA	False	AATACA	-15	NA	91940925	91996052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602
transcript_86926.nic	chr7	+	383	2	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-93	22274	-7	-22274	5prime_fragment	FALSE	canonical	3	30	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAACGTCAAGCAGTA	NA	False	NA	NA	False	NA	NA	NA	91940832	91973778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_91941148_91973710
transcript_86928.known	chr7	-	3155	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_9	71.8207645616658	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-22	True	NA	-23	True	ATTAAA	-17	NA	92134477	92112152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
transcript_86929.known	chr7	-	1729	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	213.768537568841	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATCTAGGTAATTGGC	-1	True	NA	62	True	NA	NA	NA	92134803	92113411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
transcript_86938.nic	chr7	-	747	4	ISM	ENSG00000001630.18	ENST00000003100.13	3155	10	-85	15398	-59	-13857	5prime_fragment	FALSE	canonical	3	669	junction_3	87.4922218765125	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAAGGAATACTTTGA	8391	False	NA	NA	False	TTTAAA	-25	NA	92134562	92127550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92127632_92128879_92129057_92131773_92131873_92134172
transcript_86939.known	chr7	-	4079	19	FSM	ENSG00000001631.17	ENST00000394505.7	4079	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_18	25.3667542705452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-8	True	NA	NA	False	AATAAA	-19	NA	92245914	92199412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245172_92245789
transcript_86944.nnic	chr7	-	3095	19	NIC	ENSG00000001631.17	novel	4180	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_18	27.6385399196283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTTCAACAAGGCATAT	-6	True	NA	NA	False	NA	NA	NA	92245912	92200357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245135_92245789
transcript_86955.nic	chr7	-	3430	17	FSM	ENSG00000001631.17	ENST00000692807.1	4157	17	2	725	-1	97	multi-exon	FALSE	canonical	0	0	junction_16	27.6741643956959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATAACACTGTTATTTA	-15	True	NA	-8	True	AATAAA	-23	NA	92245921	92200013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426
transcript_86957.nic	chr7	-	3086	17	FSM	ENSG00000001631.17	ENST00000692807.1	4157	17	2	1069	-1	0	multi-exon	FALSE	canonical	0	0	junction_16	27.6741643956959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTTCAACAAGGCATAT	-15	True	NA	NA	False	NA	NA	NA	92245921	92200357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426
transcript_86961.nic	chr7	-	2714	4	FSM	ENSG00000001631.17	ENST00000422347.6	2797	4	134	-51	0	34	multi-exon	FALSE	canonical	3	48	junction_3	24.7296493213219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTCCTGCATATGAT	-17	True	NA	NA	False	NA	NA	NA	92245923	92239712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92241153_92242033_92242138_92244001_92244150_92244901
transcript_86962.known	chr7	-	665	3	ISM	ENSG00000001631.17	ENST00000452773.6	324	4	11	-21	-1	21	intron_retention	FALSE	canonical	0	0	junction_2	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCAACAGTGAAATAAC	-9	True	NA	NA	False	AAAAAG	-31	NA	92245915	92241080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92241153_92242033_92242138_92245426
transcript_86965.known	chr7	-	4369	24	FSM	ENSG00000127980.16	ENST00000248633.9	4369	24	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_14	23.583900823906	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTATCTGTTCTTTGT	-27	True	NA	-7	True	AATAAA	-20	NA	92528520	92487024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_86967.known	chr7	-	3329	21	FSM	ENSG00000127980.16	ENST00000438045.5	3329	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	42.4832614096423	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTTCTTTGTATATC	-3	True	NA	-2	True	AATAAA	-25	NA	92528441	92487019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92522101_92522246_92528306
transcript_86971.nic	chr7	-	1751	8	ISM	ENSG00000127980.16	ENST00000428214.5	3681	23	-85	23408	0	0	5prime_fragment	FALSE	canonical	3	130	junction_1	12.2757434622519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTGCATTGTGAAGTGT	-27	True	NA	-1	True	AATAAA	-19	NA	92528520	92510864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_86974.known	chr7	+	1716	6	FSM	ENSG00000157259.8	ENST00000645746.1	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	55.5027927225288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCAGCCTGGGCAA	29	True	NA	NA	False	NA	NA	NA	92447502	92457119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92447979_92448751_92448878_92449091_92449214_92450700_92450761_92454501_92454686_92456371
transcript_86975.known	chr7	+	4571	5	FSM	ENSG00000157259.8	ENST00000287957.5	4571	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	13.2759180473518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAACCATTCCAGTTCC	8	True	NA	NA	False	AATAAA	-29	NA	92447481	92460075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92447979_92448751_92448878_92450700_92450761_92454501_92454686_92456371
transcript_86980.known	chr7	+	4667	5	FSM	ENSG00000127993.16	ENST00000265732.10	4667	5	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_3	31.2759891929896	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACATAAAAAATTATTTA	1	True	NA	NA	False	AATAAA	-26	NA	92528794	92540481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536850
transcript_86982.known	chr7	-	2434	12	FSM	ENSG00000234545.8	ENST00000438306.5	2434	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	243.847737344976	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-2	True	NA	-16	True	AATAAA	-20	NA	92590393	92560792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92585297_92585397_92590267
transcript_86987.known	chr7	-	1890	11	FSM	ENSG00000234545.8	ENST00000415397.6	1890	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	235.727066753057	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAGAATCTTAGTAAAT	79	False	NA	-127	True	NA	NA	NA	92590329	92561136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577677_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_86989.known	chr7	-	2367	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	221.763026674872	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTTACAAAGATAAAC	1	True	NA	19	True	NA	NA	NA	92590390	92560757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_87.known	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1288	junction_5	1014.67123458079	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
transcript_87001.nic	chr7	-	750	10	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-30	5292	-27	0	5prime_fragment	FALSE	canonical	3	175	junction_5	178.845060193329	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGCAGTGAAGA	NA	False	NA	-41	True	TTTAAA	-21	NA	92590420	92566049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_87008.nic	chr7	-	740	9	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-30	9063	-27	-279	5prime_fragment	FALSE	canonical	3	175	junction_4	160.648636393217	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATATGATCAAATCCAT	NA	False	NA	NA	False	NA	NA	NA	92590420	92569820	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_87019.known	chr7	-	410	3	FSM	ENSG00000234545.8	ENST00000480397.5	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	30	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAATACCTTAA	70	False	NA	NA	False	NA	NA	NA	92590338	92579154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_92579396_92581505_92581604_92590267
transcript_8702.known	chr1	-	632	8	FSM	ENSG00000234741.9	ENST00000690941.1	1443	8	0	811	0	289	multi-exon	FALSE	canonical	3	1580	junction_7	542.651013496685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCATGCCCCGCCTC	-2	True	NA	NA	False	NA	NA	NA	173867989	173864954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_87020.known	chr7	+	407	3	FSM	ENSG00000237819.6	ENST00000686356.1	593	3	122	64	2	-51	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGCTGCCACACCG	1	True	NA	-56	True	ATTAAA	-3	NA	92836488	92917123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_92836564_92854908_92854954_92916836
transcript_87021.known	chr7	+	5736	29	FSM	ENSG00000004766.17	ENST00000544910.5	5736	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.08428504032527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAATTGATGAATACA	4140	False	NA	NA	False	AATAAA	-13	NA	93232339	93361121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_93232501_93239865_93239935_93246101_93246130_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_87022.known	chr7	+	5684	28	FSM	ENSG00000004766.17	ENST00000305866.10	5684	28	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	6.61834338303797	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATTGATGAATACAAG	-11	True	NA	NA	False	AATAAA	-15	NA	93232365	93361123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_87025.known	chr7	+	1193	12	FSM	ENSG00000004766.17	ENST00000251739.9	1193	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	5.41500822248561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCTCCCAAGTTGT	4140	False	NA	NA	False	AATAAA	-20	NA	93232339	93276428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164
transcript_87029.known	chr7	-	3572	14	FSM	ENSG00000004948.16	ENST00000426151.7	3572	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	10.3597994086267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCGTCTCCTGCTCA	2	True	NA	-4	True	AATATA	-20	NA	93574724	93424485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93574691
transcript_87032.nnic	chr7	-	3943	14	NNC	ENSG00000004948.16	novel	3572	14	NA	NA	-67970	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_13	8.05381309228392	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATATTTGCATATTTT	NA	False	NA	-2	True	TATAAA	-29	NA	93642700	93424538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93642243
transcript_87033.nnic	chr7	-	3533	14	NNC	ENSG00000004948.16	novel	3572	14	NA	NA	-68146	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.2816552757518	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATATTTGCATATTTT	NA	False	NA	-2	True	TATAAA	-29	NA	93642876	93424538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93642829
transcript_87034.nnic	chr7	+	956	2	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-303	-102202	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAATACTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	93591269	93807657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_93591772_93807203
transcript_87035.known	chr7	-	2207	5	FSM	ENSG00000105825.14	ENST00000222543.11	2207	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	6.20483682299543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTAAGCATTCAAACC	-1	True	NA	NA	False	AATAAA	-13	NA	93890753	93885395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_93886897_93887260_93887432_93889034_93889224_93890136_93890320_93890590
transcript_87042.known	chr7	-	1144	5	FSM	ENSG00000105825.14	ENST00000650573.1	1144	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	20.7650547796051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACATATTTGAGAATAAAA	5	True	NA	74	True	AATATA	-13	NA	93890747	93886470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_93886897_93887260_93887432_93889016_93889224_93890136_93890320_93890590
transcript_87043.known	chr7	+	3019	2	FSM	ENSG00000127920.6	ENST00000248564.6	3019	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTGAGACTTAGGT	-3	True	NA	NA	False	ATTAAA	-16	NA	93921734	93928610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_93922234_93926090
transcript_87046.known	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	43.2897216438267	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	2	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
transcript_87048.known	chr7	+	5072	52	FSM	ENSG00000164692.19	ENST00000297268.11	5072	52	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.262569106984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGAGTAAAATTCCTT	0	True	NA	32	True	AATAAA	-45	NA	94394894	94431227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
transcript_87049.nic	chr7	+	1105	2	ISM	ENSG00000164692.19	ENST00000297268.11	5072	52	0	32582	0	-18165	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTTTTATTCTGGAG	0	True	NA	NA	False	NA	NA	NA	94394894	94398645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_94395102_94397747
transcript_8705.known	chr1	-	2357	7	FSM	ENSG00000120334.16	ENST00000356198.6	2357	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	37.5429383802363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	8	True	NA	NA	False	ATTAAA	-19	NA	173824322	173799549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173800520_173802962_173803506_173806438_173806577_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_87050.known	chr7	-	1493	12	FSM	ENSG00000127990.19	ENST00000646119.1	1493	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.8407581506318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAATACAACATAACTT	9568	False	NA	NA	False	NA	NA	NA	94656072	94585365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94587777_94587850_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_87051.known	chr7	-	1713	12	FSM	ENSG00000127990.19	ENST00000644551.1	1713	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	86.7837628108122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAAAGTTGATCTTTAA	-10	True	NA	-60	True	AAAACA	-22	NA	94656186	94585268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94622545_94622627_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_87052.known	chr7	-	1733	12	FSM	ENSG00000127990.19	ENST00000646489.1	1733	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	83.90303336748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGACTGGTGAAATT	-20	True	NA	-21	True	AATAAA	-33	NA	94656140	94585229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94655989
transcript_87053.known	chr7	-	1686	12	FSM	ENSG00000127990.19	ENST00000646559.1	1686	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	84.0679575557971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTGATCTTTAAAATAA	3	True	NA	-55	True	AAAACA	-27	NA	94656173	94585263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94644605_94644668_94655989
transcript_87055.known	chr7	-	1566	11	FSM	ENSG00000127990.19	ENST00000646098.1	1566	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	70.4369221360502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATGACTTTATATT	7	True	NA	-85	True	NA	NA	NA	94656169	94585293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618933_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_87056.known	chr7	-	1868	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	28.6986062379343	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGATTGTGAAACTG	-13	True	NA	NA	False	AATAAA	-6	NA	94656133	94584979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_87057.known	chr7	-	1652	11	FSM	ENSG00000127990.19	ENST00000645725.1	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	103.861494308526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAATGAAGCCTAATGA	-4	True	NA	-32	True	AATAAA	-22	NA	94656124	94585240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94622545_94622627_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_87059.known	chr7	-	1532	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	61.9876530915832	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCCTAATGACTGG	-1	True	NA	-28	True	AATAAA	-26	NA	94656177	94585236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
transcript_87060.known	chr7	-	1672	10	FSM	ENSG00000127990.19	ENST00000447873.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	70.6956614171611	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-3	True	NA	-14	True	AATAAA	-40	NA	94656207	94585222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_87061.nnic	chr7	-	1123	7	NIC	ENSG00000127990.19	novel	1733	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	81.0810636886868	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGACTGGTGAAATT	9449	False	94656204	-21	True	AATAAA	-33	NA	94656191	94585229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94655989
transcript_87062.known	chr7	-	1692	9	FSM	ENSG00000127990.19	ENST00000643128.1	1692	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	24.4511630602718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTAATCTAAATTT	-25	True	NA	NA	False	ATTAAA	-15	NA	94656145	94598382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_87063.known	chr7	+	3931	18	FSM	ENSG00000127995.17	ENST00000297273.9	3931	18	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_9	29.8983282910947	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGATCCATTCATGATT	-31	True	NA	39	True	ATTAAA	-24	NA	94509808	94557019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_94510218_94517559_94517657_94518202_94518324_94527161_94527207_94528187_94528251_94533204_94533250_94533678_94533803_94535308_94535524_94537471_94537895_94538966_94539057_94544410_94544531_94545544_94545702_94547095_94547176_94549532_94549635_94551337_94551479_94552349_94552428_94554482_94554576_94555491
transcript_87070.known	chr7	+	6394	2	FSM	ENSG00000242265.6	ENST00000615790.5	6394	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCCTGATCATTT	176	False	NA	27	True	AATAAA	-30	NA	94656545	94669692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_94656581_94663333
transcript_87071.known	chr7	+	2587	2	FSM	ENSG00000242265.6	ENST00000488574.5	2587	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCTGCCCTCAAA	0	True	NA	NA	False	NA	NA	NA	94656369	94665698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_94656592_94663333
transcript_87073.nic	chr7	+	2686	10	ISM	ENSG00000158528.12	ENST00000424654.5	4058	18	-81	38563	0	-38563	5prime_fragment	FALSE	canonical	3	10	junction_1	4.79454422453143	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAATAGAAGA	-43	True	NA	NA	False	NA	NA	NA	94907593	95251792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_94907703_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025_95250256_95251761
transcript_87074.known	chr7	+	9928	16	FSM	ENSG00000158528.12	ENST00000433881.5	9928	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.80484180208386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGAAGCAATTTTTTT	38	False	NA	15	True	AATAAA	-15	NA	94908278	95296402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_94908595_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025_95250256_95251761_95251859_95251958_95252131_95268549_95268708_95286205_95286326_95287109_95287134_95288535_95288719_95290090
transcript_87078.known	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	125.903174602549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	186	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_87079.known	chr7	-	1876	9	FSM	ENSG00000105854.13	ENST00000633192.1	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_6	73.0529559634653	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGGAGTTATATTAAAGA	55	False	NA	NA	False	ATTAAA	-2	NA	95435329	95404896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_87080.nic	chr7	+	2491	13	NIC	ENSG00000158560.14	novel	774	7	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	3.81790372965177	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCACCAGTGTGAGTA	NA	False	NA	4	True	AATAAA	-14	NA	95837502	96098424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_95837650_95869882_95869999_95977511_95977602_95984814_95984978_95987055_95987156_95995947_95996074_96028174_96028322_96032666_96032781_96035618_96035753_96039276_96039422_96076056_96076198_96080362_96080489_96097482
transcript_87086.known	chr7	-	3192	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_9	111.549576236208	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTTGTTTGGTCTTGT	4628	False	NA	-4	True	AATAAA	-15	NA	96322147	96120220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_871.nic	chr1	+	1556	2	ISM	ENSG00000188984.12	ENST00000359318.8	4055	4	-462	8427	-462	-8426	5prime_fragment	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGGTTTGGTCTG	NA	False	NA	6	True	AATAAA	-14	NA	12715647	12720333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_12716345_12719474
transcript_87109.known	chr7	-	729	3	FSM	ENSG00000127922.10	ENST00000623693.3	729	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTTCCTGTTTCTAATGT	90	False	NA	NA	False	NA	NA	NA	96709780	96645390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_96645933_96694797_96694892_96709687
transcript_87111.known	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7433	junction_1	388.5	3226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	NA	False	NA	NA	False	AATACA	-19	NA	96709891	96687950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_96688967_96694797_96694892_96709687
transcript_87114.nic	chr7	+	1167	3	NIC	ENSG00000196636.8	novel	952	2	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	81	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	964	False	NA	16	True	AATAAA	-16	NA	97117628	97181763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_97117898_97142672_97142819_97181011
transcript_87115.known	chr7	+	731	3	FSM	ENSG00000196636.8	ENST00000360382.4	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCATATTAGTCTTCT	-1	True	NA	NA	False	TTTAAA	-13	NA	97117722	97181487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97117898_97136387_97136468_97181011
transcript_87117.known	chr7	+	952	2	FSM	ENSG00000196636.8	ENST00000432641.3	952	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	1	True	NA	16	True	AATAAA	-16	NA	97117697	97181763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97117898_97181011
transcript_87118.known	chr7	+	1061	7	FSM	ENSG00000006128.12	ENST00000319273.10	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.3748384988657	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCACATGTCTTT	1	True	NA	14	True	AATAAA	-18	NA	97732085	97740472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97736298_97736353_97739873
transcript_87119.known	chr7	+	1011	6	FSM	ENSG00000006128.12	ENST00000346867.4	1011	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.5861986863682	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGATTTTTGTCACA	-1	True	NA	7	True	AATAAA	-11	NA	97732083	97740465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734825_97734850_97736298_97736353_97739873
transcript_87121.nic	chr7	-	1762	11	ISM	ENSG00000284707.2	ENST00000641315.1	2059	12	59302	0	59302	0	3prime_fragment	FALSE	canonical	3	498	junction_10	73.4580832856398	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAACCATTGCTGTAG	3342	False	NA	-22	True	AATAAA	-8	NA	97869109	97852135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907
transcript_87124.known	chr7	-	2356	14	FSM	ENSG00000070669.17	ENST00000175506.8	2356	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	221.748484848362	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTATGTTCATGCAG	NA	False	NA	-4	True	AATAAA	-26	NA	97872542	97852117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718_97871997_97872350
transcript_87125.known	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	160.579592587463	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	15	True	NA	-90	True	NA	NA	NA	97872436	97852203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
transcript_87126.known	chr7	-	2289	13	FSM	ENSG00000070669.17	ENST00000394309.7	2289	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	174.017400151696	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCTGTAGTCATTTAT	-2	True	NA	-14	True	AATAAA	-16	NA	97872131	97852127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718
transcript_87128.known	chr7	-	2385	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_10	67.7390315024424	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTTGTGGACCTC	0	True	NA	NA	False	AATAAA	-18	NA	97872408	97851676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
transcript_87138.known	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	189.695967273951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	57	False	NA	-38	True	NA	NA	NA	97872394	97852151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
transcript_87139.nnic	chr7	-	942	4	Fusion	ENSG00000183444.10_ENSG00000243554.1	novel	447	6	NA	NA	-97	-287	multi-exon	FALSE	canonical	3	82	junction_1	34.4770455037358	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCTTTCTCTAAAAT	-21	True	NA	30	True	NA	NA	NA	97972351	97966376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_87140.nnic	chr7	-	723	4	Fusion	ENSG00000183444.10_ENSG00000243554.1	novel	447	6	NA	NA	-97	-506	multi-exon	FALSE	canonical	3	82	junction_1	34.4770455037358	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTAGTTTTGTTGTCTT	-21	True	NA	-18	True	NA	NA	NA	97972351	97966595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_87142.nnic	chr7	+	665	3	NNC	ENSG00000164713.10	novel	667	3	NA	NA	-31	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	94	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	-12	True	NA	17	True	AATAAA	-17	NA	98252347	98291524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_98252496_98282350_98282454_98291110
transcript_87143.known	chr7	+	667	3	FSM	ENSG00000164713.10	ENST00000456357.6	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	90	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	19	False	NA	17	True	AATAAA	-17	NA	98252378	98291524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_98252529_98282350_98282454_98291110
transcript_87144.known	chr7	+	790	3	FSM	ENSG00000164713.10	ENST00000297290.4	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	23	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCTTTCAGAGACCCAG	4	True	NA	38	True	AATAAA	-38	NA	98281685	98291545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_98281938_98282350_98282454_98291110
transcript_87148.known	chr7	-	5668	18	FSM	ENSG00000198742.10	ENST00000361368.7	5668	18	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_2	24.3926927625388	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGGCGTCTGTTATT	15	True	NA	-17	True	AATAAA	-13	NA	99144108	99027439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_87153.known	chr7	+	1509	11	FSM	ENSG00000130429.15	ENST00000431816.6	1509	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	290.760107304974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	0	True	NA	NA	False	NA	NA	NA	99374729	99394712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_87155.known	chr7	+	1669	11	FSM	ENSG00000130429.15	ENST00000645391.1	1669	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	288.976210093495	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	360	False	NA	NA	False	AATAAA	-35	NA	99374674	99394801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377337_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_87156.known	chr7	+	1578	11	FSM	ENSG00000130429.15	ENST00000427217.6	1578	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	290.958158503933	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	0	True	NA	NA	False	AATAAA	-35	NA	99374729	99394801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377357_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_87157.known	chr7	+	1505	11	FSM	ENSG00000130429.15	ENST00000458033.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	289.175794284376	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	0	True	NA	NA	False	NA	NA	NA	99374729	99394712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377357_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_87158.known	chr7	+	1582	10	FSM	ENSG00000241685.10	ENST00000262942.10	1582	10	0	0	0	0	multi-exon	TRUE	canonical	3	807	junction_7	76.5024005110338	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTGTTTCCTTGT	-15	True	NA	18	True	AATAAA	-15	NA	99325897	99366262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358416_99359544_99359739_99363542_99363634_99365890
transcript_87161.known	chr7	+	1511	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	41.8678107888019	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	0	True	NA	NA	False	AAAAAG	-15	NA	99374729	99394816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_87178.known	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_5	94.3046128246121	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-11	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
transcript_87180.known	chr7	-	767	6	FSM	ENSG00000106244.13	ENST00000426447.3	767	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	306.385769904544	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGATGGGGGGGGGGA	-4	True	NA	NA	False	NA	NA	NA	99408590	99396522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403526_99404861_99404954_99408535
transcript_87191.known	chr7	+	1556	11	FSM	ENSG00000130429.15	ENST00000455009.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	293.949655553464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCATGAACTGCTTCAAAA	-3	True	NA	NA	False	NA	NA	NA	99374706	99394732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99377333_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_87192.known	chr7	-	120	3	FSM	ENSG00000106244.13	ENST00000626285.1	120	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGGAAGAAGAGGAGCAA	277	False	NA	NA	False	NA	NA	NA	99408548	99403510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99403526_99404861_99404954_99408535
transcript_87193.known	chr7	+	1715	12	FSM	ENSG00000130429.15	ENST00000451682.5	1715	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	327.448361962716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	AATAAA	-10	NA	99374729	99394776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99374782_99376432_99376575_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_872.known	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	203.912334104634	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	-10	True	NA	13	True	AATAAA	-19	NA	13583761	13617957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
transcript_87201.known	chr7	+	1823	8	FSM	ENSG00000160917.15	ENST00000292476.10	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_6	203.662686312241	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTCTCATTAATTAAG	-8	True	NA	27	True	ATTAAA	-14	NA	99438942	99457373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431
transcript_87202.known	chr7	+	1738	8	FSM	ENSG00000160917.15	ENST00000436336.6	1738	8	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_6	182.726962589386	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATGGATTAAAGC	-29	True	NA	-4	True	NA	NA	NA	99438921	99457342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_87204.known	chr7	+	942	8	FSM	ENSG00000160917.15	ENST00000441580.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	342.556654036219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGAGCTGGCCCGCAGA	-35	True	NA	NA	False	NA	NA	NA	99439375	99456589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99439597_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_87206.known	chr7	-	5464	8	FSM	ENSG00000106246.18	ENST00000292478.9	5464	8	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	13.5526185435788	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-36	True	NA	NA	False	NA	NA	NA	99438798	99416738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438691
transcript_8721.known	chr1	-	1771	6	FSM	ENSG00000120334.16	ENST00000367710.7	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	26.7686383665662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCGTTTATTATGTTTA	740	False	NA	NA	False	AATAAA	-21	NA	173824174	173799849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_87212.known	chr7	+	1139	6	FSM	ENSG00000106245.11	ENST00000403633.6	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_1	254.984234806782	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	14	True	NA	17	True	AATAAA	-18	NA	99408640	99419616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99409005_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_87213.known	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	296.229370589751	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	16	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_87215.known	chr7	+	585	5	FSM	ENSG00000106245.11	ENST00000496696.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	489.347716353106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGACACTCAAGCTTG	16	True	NA	NA	False	NA	NA	NA	99408968	99417598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99409005_99410036_99410170_99411063_99411187_99416137_99416261_99417428
transcript_87219.known	chr7	-	443	4	FSM	ENSG00000241468.8	ENST00000292475.8	443	4	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_3	1992.21200344408	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	0	True	NA	-36	True	AATAAA	-13	NA	99466167	99458194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466110
transcript_8722.known	chr1	-	2706	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	9.8508882848198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-4	True	NA	NA	False	ATTAAA	-19	NA	173824883	173799549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
transcript_87220.known	chr7	-	305	4	FSM	ENSG00000241468.8	ENST00000394186.3	305	4	0	0	0	0	multi-exon	FALSE	canonical	3	4163	junction_3	1022.39337939084	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCACCCCACGACCTTG	6	True	NA	-150	True	NA	NA	NA	99466161	99458308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466128
transcript_87222.known	chr7	-	323	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	817	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	3	True	NA	-36	True	AATAAA	-13	NA	99466164	99458194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99460085_99460194_99466110
transcript_87223.known	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	1859	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	0	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99460085_99460194_99466128
transcript_87227.known	chr7	-	584	2	FSM	ENSG00000241468.8	ENST00000524321.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGGATTGCTTGAGC	3	True	NA	NA	False	NA	NA	NA	99466164	99459663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99460194_99466110
transcript_87228.known	chr7	-	597	2	FSM	ENSG00000241468.8	ENST00000485011.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	4163	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGAGCCGAGTTTAG	-19	True	NA	NA	False	NA	NA	NA	99466186	99459654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99460194_99466128
transcript_87229.known	chr7	-	460	4	FSM	ENSG00000241468.8	ENST00000449683.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2967.96574553459	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGATTGCCTGCCTGTCTG	0	True	NA	-31	True	AATAAA	-18	NA	99466167	99458189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99458356_99459146_99459264_99460085_99460224_99466128
transcript_87230.known	chr7	+	1055	7	FSM	ENSG00000198556.14	ENST00000448667.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	10.6874796945876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGTCTTATGAATGCA	1	True	NA	NA	False	NA	NA	NA	99472889	99486800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660_99479788_99484029_99484144_99485207_99485369_99486475
transcript_87231.known	chr7	+	5083	7	FSM	ENSG00000196652.12	ENST00000326775.10	5083	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.3776282653032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTGGAGAGATGGTA	-1	True	NA	NA	False	NA	NA	NA	99504661	99534700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99504734_99506004_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_87233.nic	chr7	+	1766	6	NIC	ENSG00000198556.14	novel	1055	7	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	14.7322774885623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGGGAGCCATCTTT	1	True	NA	3	True	AATAAA	-15	NA	99472889	99487594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_99473057_99476402_99476481_99479660_99479788_99484029_99484144_99485207_99485369_99486475
transcript_87239.known	chr7	+	1616	5	FSM	ENSG00000198556.14	ENST00000331410.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	12.7744862910412	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTTGTGTAGCCAAT	1	True	NA	14	True	AATAAA	-26	NA	99472889	99487605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99484029_99484144_99486475
transcript_87242.nic	chr7	+	1634	4	NIC	ENSG00000198556.14	novel	1616	5	NA	NA	-96	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTTGTGTAGCCAAT	6544	False	NA	14	True	AATAAA	-26	NA	99472793	99487605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_99473057_99479660_99479788_99484029_99484144_99486475
transcript_87243.known	chr7	+	2994	4	FSM	ENSG00000198556.14	ENST00000483089.5	2994	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	11.5758369027902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	1	True	NA	NA	False	AATAAA	-21	NA	99472889	99482326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660
transcript_87244.known	chr7	+	510	4	FSM	ENSG00000198556.14	ENST00000379724.3	510	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	12.4988888395018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	0	True	NA	NA	False	AATAAA	-17	NA	99472911	99482322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99482162
transcript_87246.nnic	chr7	+	1223	4	NNC	ENSG00000198556.14	novel	2994	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	11.0855260988773	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	-7	True	NA	NA	False	AATAAA	-21	NA	99472881	99482326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_99473057_99476402_99476481_99479660_99480039_99481734
transcript_87248.known	chr7	+	1884	3	FSM	ENSG00000198556.14	ENST00000488485.5	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCATGAATTTTT	3	True	NA	NA	False	AATAGA	-12	NA	99472891	99481301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99473057_99476402_99476481_99479660
transcript_87250.nic	chr7	-	1257	3	ISM	ENSG00000160908.15	ENST00000651364.1	5731	5	-89	12642	2	0	5prime_fragment	FALSE	canonical	2	3	junction_1	39.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGAGTTAGCTTTTT	NA	False	NA	0	True	NA	NA	NA	99500322	99486518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_99486964_99498715_99498843_99499637
transcript_87252.known	chr7	-	2163	3	FSM	ENSG00000160908.15	ENST00000337673.7	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	4	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGACTTGGCCTGTT	-5	True	NA	-8	True	AATAAA	-22	NA	99500281	99493239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99494632_99498715_99498843_99499637
transcript_87253.known	chr7	-	2017	2	FSM	ENSG00000160908.15	ENST00000426306.2	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATGTGACTTGGCCTG	12	True	NA	-10	True	AATAAA	-20	NA	99500264	99493241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99494632_99499637
transcript_87254.known	chr7	-	325	2	FSM	ENSG00000160908.15	ENST00000464401.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTCTGTACTGCTAG	572	False	NA	-104	True	NA	NA	NA	99499704	99498584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99498843_99499637
transcript_87260.known	chr7	+	1601	5	FSM	ENSG00000197343.11	ENST00000320583.9	1601	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	59.1623824740012	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	5	True	NA	21	True	NA	NA	NA	99558405	99564705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99562367_99562495_99563862
transcript_87264.nnic	chr7	+	1303	4	NIC	ENSG00000197343.11	novel	1601	5	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	66.9593574906118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	12	True	NA	21	True	NA	NA	NA	99558617	99564705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_99558788_99560532_99560696_99562367_99562495_99563862
transcript_87265.known	chr7	+	545	3	FSM	ENSG00000197343.11	ENST00000452314.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	64.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCTGCTCGGAAACTCC	13	True	NA	NA	False	NA	NA	NA	99558566	99564023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99558788_99560532_99560696_99563862
transcript_87267.known	chr7	-	2468	2	FSM	ENSG00000221909.3	ENST00000449309.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTTCTACATAGTA	-2	True	NA	-16	True	AATAAA	-20	NA	99552114	99546299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99548507_99551853
transcript_87268.known	chr7	-	1943	2	FSM	ENSG00000221909.3	ENST00000408938.2	1943	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAGAAGAGAAATA	-16	True	NA	NA	False	NA	NA	NA	99558536	99546800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_99548507_99558299
transcript_87271.known	chr7	+	4518	3	FSM	ENSG00000197343.11	ENST00000252713.9	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	44	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTCAAACAAAATCTG	-16	True	NA	23	True	AATAAA	-23	NA	99558641	99576453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99558788_99560532_99560696_99572244
transcript_87272.known	chr7	+	4352	8	FSM	ENSG00000197037.11	ENST00000394152.7	4352	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	11.8528391501095	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTCTGTCCACTCCT	-12	True	NA	NA	False	TATAAA	-17	NA	99616945	99632408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_87277.known	chr7	+	2823	8	FSM	ENSG00000197037.11	ENST00000394150.5	2823	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	26.9784494494009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTAGTATTAATGCCCT	-10	True	NA	NA	False	ATTAAA	-17	NA	99616947	99630904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_99616990_99618524_99618652_99619047_99619133_99619560_99619998_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_87284.known	chr7	+	9403	6	FSM	ENSG00000106261.17	ENST00000324306.11	9403	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	13.7753402861781	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	-6	True	NA	26	True	AATAAA	-20	NA	100015595	100041689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
transcript_87286.nnic	chr7	+	1574	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	4	junction_5	26.6608326951729	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	-6	True	NA	26	True	AATAAA	-20	NA	100015595	100041689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100041133
transcript_87288.known	chr7	+	1449	3	FSM	ENSG00000106261.17	ENST00000482979.5	1449	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTTTTTGTTTTTAG	-3	True	NA	NA	False	ATTAAA	-30	NA	100015598	100024960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100015727_100023418_100023933_100024153
transcript_87293.known	chr7	-	1441	6	FSM	ENSG00000166526.18	ENST00000413658.6	1441	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	78.4561023757872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATATAACGTCTCTCTC	-4	True	NA	NA	False	ACTAAA	-19	NA	100081727	100064032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100064913_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_87295.known	chr7	-	2797	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	28.7304716285689	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGTGGTTTTGTGC	0	True	NA	-2	True	ATTAAA	-21	NA	100081723	100069972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_87296.known	chr7	-	999	6	FSM	ENSG00000166526.18	ENST00000428683.5	999	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	74.0043241979818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	7498	False	NA	NA	False	AATATA	-32	NA	100082548	100071929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100082300
transcript_87300.nic	chr7	+	2146	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	34	junction_1	47.9915357120399	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCTCAGGACTATTAT	-10	True	NA	6	True	AATAAA	-15	NA	100049766	100065037	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
transcript_87304.known	chr7	+	1904	5	FSM	ENSG00000166529.16	ENST00000456748.6	1904	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	53.5933764564242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	-3	True	NA	7	True	AATAAA	-16	NA	100049773	100065038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787_100063980_100064082
transcript_87306.known	chr7	-	735	5	FSM	ENSG00000166526.18	ENST00000449785.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	75.2927619363243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	-16	True	NA	NA	False	AATATA	-32	NA	100081739	100071929	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100081634
transcript_87307.known	chr7	-	574	5	FSM	ENSG00000166526.18	ENST00000441298.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	86.6775634175304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAAAGGCCGCTGGGGA	-15	True	NA	NA	False	TTTAAA	-24	NA	100081738	100072079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100079535_100079657_100081634
transcript_87308.nic	chr7	-	3100	5	NIC	ENSG00000166526.18	novel	2797	6	NA	NA	10	0	intron_retention	FALSE	canonical	3	132	junction_3	26.1378556886367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGATTGAGTGTGGTT	8294	False	NA	-8	True	ATTAAA	-15	NA	100081752	100069978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_100072213_100075134_100075631_100077302_100077434_100079535_100079657_100081634
transcript_87311.nic	chr7	-	2902	5	NIC	ENSG00000166526.18	novel	2797	6	NA	NA	10	0	intron_retention	FALSE	canonical	3	132	junction_3	26.1378556886367	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	8294	False	NA	5	True	NA	NA	NA	100081752	100070176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_100072213_100075134_100075631_100077302_100077434_100079535_100079657_100081634
transcript_87312.known	chr7	+	2009	4	FSM	ENSG00000166529.16	ENST00000292450.9	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	37.7977071615021	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	-3	True	NA	9	True	AATAAA	-18	NA	100049773	100065040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787
transcript_87314.known	chr7	-	2545	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	89.25743044077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-19	True	NA	-21	True	ATTAAA	-2	NA	100081742	100069991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
transcript_87321.known	chr7	+	1107	10	FSM	ENSG00000168090.10	ENST00000418625.5	1107	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	776.145604896401	1366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTGGTGGCTCTGTC	3	True	NA	16	True	AATAAA	-21	NA	100088980	100091905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100089067_100089292_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
transcript_87348.known	chr7	+	3591	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	15.8539250274344	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTGTGGTGGTTCA	-2	True	NA	NA	False	AAAAAG	-3	NA	100101642	100109039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_87351.known	chr7	+	1836	15	FSM	ENSG00000221838.10	ENST00000429084.5	1836	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.5865409803069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTACGTGCACGT	-12	True	NA	43	True	NA	NA	NA	100101556	100107177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100101773_100101879_100101990_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_87363.known	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_11	148.78555997523	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-23	True	NA	-4	True	ATTAAA	-23	NA	100101397	100092727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
transcript_87369.known	chr7	-	2727	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_14	231.919991921915	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGATCCACTGCAGT	2	True	NA	-11	True	AATAAA	-13	NA	100119346	100107078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
transcript_87370.known	chr7	-	2424	15	FSM	ENSG00000106290.16	ENST00000453269.7	2424	15	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_14	73.3872868932421	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-10	True	NA	-2	True	AATAAA	-22	NA	100119358	100107069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119203
transcript_87371.known	chr7	-	2297	15	FSM	ENSG00000106290.16	ENST00000452041.5	2297	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_14	253.905705219196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	-16	True	NA	-10	True	AATAAA	-14	NA	100119364	100107077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119328
transcript_87372.known	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	269.714399213051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	9	True	NA	-42	True	NA	NA	NA	100119841	100107167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
transcript_8738.known	chr1	-	897	5	FSM	ENSG00000234741.9	ENST00000443799.5	897	5	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_4	652.269307878272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGTTGGGAAATCTTTT	-2	True	NA	-20	True	AAGAAA	-25	NA	173867989	173865352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173865548_173865856_173866207_173866527_173866797_173866990_173867044_173867959
transcript_87384.known	chr7	-	2900	14	FSM	ENSG00000166508.18	ENST00000485286.5	2900	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	382.444071016432	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	-19	True	NA	-9	True	AATAAA	-18	NA	100100757	100092780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100100212
transcript_87385.known	chr7	-	3084	14	FSM	ENSG00000166508.18	ENST00000621318.4	3084	14	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_11	140.297570485107	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTCGTTTTTAT	9888	False	NA	-5	True	ATTAAA	-22	NA	100101940	100092728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100101263
transcript_87414.known	chr7	+	1478	6	FSM	ENSG00000166997.8	ENST00000262932.5	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	8.64869932417586	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGGCCCAAAGTTTC	-19	True	NA	33	True	ATTAAA	-23	NA	100119633	100125508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100119863_100122258_100122386_100122480_100122578_100122783_100122907_100124513_100124632_100124724
transcript_87426.known	chr7	+	1814	14	FSM	ENSG00000221838.10	ENST00000422582.5	1814	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	28.2669020495577	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTTCCTTCCGCTT	117	False	NA	14	True	AAAAAG	-22	NA	100102060	100107148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100102394_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_8743.known	chr1	-	1060	3	FSM	ENSG00000234741.9	ENST00000421068.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_2	777.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGGTGATATGCTTA	0	True	NA	NA	False	AATGAA	-25	NA	173867987	173865817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173866797_173866990_173867044_173867959
transcript_87443.known	chr7	+	564	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	728.904657688507	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	12	True	NA	26	True	AATAAA	-21	NA	100148933	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
transcript_87445.known	chr7	+	616	4	FSM	ENSG00000188186.11	ENST00000460732.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	708.091017376219	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-9	True	NA	26	True	AATAAA	-21	NA	100148912	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100149498_100149580_100153399_100153518_100153849
transcript_87446.known	chr7	+	605	4	FSM	ENSG00000188186.11	ENST00000341942.10	594	4	-11	0	-5	0	multi-exon	FALSE	canonical	3	982	junction_1	407.84065515836	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-15	True	NA	26	True	AATAAA	-21	NA	100148906	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100149498_100149580_100153399_100153518_100153866
transcript_87452.nnic	chr7	+	604	4	NNC	ENSG00000188186.11	novel	594	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	843.188525116945	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-10	True	NA	26	True	AATAAA	-21	NA	100148965	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_100149034_100149498_100149580_100153399_100153518_100153866
transcript_87455.known	chr7	+	613	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	769.131111493136	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	18	True	NA	26	True	AATAAA	-21	NA	100148993	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
transcript_87456.known	chr7	+	621	4	FSM	ENSG00000188186.11	ENST00000468582.5	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	746.335194280842	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTTTAGTGTTGGA	2	True	NA	35	True	AATAAA	-30	NA	100148977	100154212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153866
transcript_8746.known	chr1	-	2473	2	FSM	ENSG00000120334.16	ENST00000495275.1	2473	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCTGAAGTACACAAA	441	False	NA	NA	False	NA	NA	NA	173824473	173821808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173824020_173824211
transcript_87462.known	chr7	+	730	3	FSM	ENSG00000188186.11	ENST00000441173.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_1	393	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGATGAGGCAGGCACA	16	True	NA	NA	False	NA	NA	NA	100148937	100154010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100149498_100149580_100153399
transcript_87464.known	chr7	+	519	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	951.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-10	True	NA	26	True	AATAAA	-21	NA	100148911	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100148976_100153399_100153518_100153866
transcript_87468.known	chr7	+	720	4	FSM	ENSG00000188186.11	ENST00000473459.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	873.57706522601	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	324	False	NA	26	True	AATAAA	-21	NA	100149356	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100149580_100152715_100152758_100153399_100153518_100153866
transcript_87469.known	chr7	+	533	3	FSM	ENSG00000188186.11	ENST00000488338.2	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	920	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	35	False	NA	26	True	AATAAA	-21	NA	100152679	100154203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100152758_100153399_100153518_100153866
transcript_87470.known	chr7	-	2405	4	FSM	ENSG00000197093.11	ENST00000360039.9	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7.54247233265651	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-11	True	NA	-3	True	AATAAA	-15	NA	100168617	100159243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100160960_100166501_100166806_100166970_100167284_100168545
transcript_8748.known	chr1	-	3145	2	FSM	ENSG00000234741.9	ENST00000650796.1	3145	2	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	-4	True	NA	-42	True	ATTAAA	-7	NA	173867991	173863930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173867044_173867959
transcript_87485.known	chr7	-	1244	7	FSM	ENSG00000078319.11	ENST00000675162.2	1822	7	0	578	0	0	multi-exon	FALSE	canonical	3	93	junction_1	72.6622705092234	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	NA	False	NA	-5	True	AATAAA	-18	NA	100336307	100320913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_8749.known	chr1	-	643	3	FSM	ENSG00000234741.9	ENST00000422207.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	2781	junction_1	8.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	3081	False	NA	-15	True	AATAAA	-11	NA	173864906	173863903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_173864076_173864256_173864305_173864483
transcript_87492.nic	chr7	-	1395	7	FSM	ENSG00000078319.11	ENST00000689817.1	1011	7	-390	6	-62	0	multi-exon	FALSE	canonical	2	7	junction_2	99.5802300771705	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	NA	False	NA	-5	True	AATAAA	-18	NA	100336369	100320913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100321085_100325690_100325869_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_87494.known	chr7	-	788	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	4	-1	0	multi-exon	FALSE	canonical	3	13	junction_1	100.002799960801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	19	False	NA	-4	True	AATAAA	-19	NA	100335939	100320912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_87498.known	chr7	-	747	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	3	0	0	multi-exon	FALSE	canonical	3	130	junction_1	63.1778442177319	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	8	True	NA	NA	False	ATTAAA	-18	NA	100335950	100325659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_87499.nic	chr7	-	1255	6	FSM	ENSG00000078319.11	ENST00000431037.4	866	6	-390	1	-62	0	multi-exon	FALSE	canonical	2	7	junction_1	102.111703540779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	100336369	100325659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100325869_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_875.known	chr1	+	2737	6	FSM	ENSG00000162493.17	ENST00000621990.5	2737	6	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_5	190.777986151443	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	60	True	NA	13	True	AATAAA	-19	NA	13583831	13617957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_8750.known	chr1	-	772	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2210	junction_4	266.391432035132	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	944	False	NA	-12	True	AATAAA	-14	NA	173867043	173863900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_87500.known	chr7	-	537	5	FSM	ENSG00000078319.11	ENST00000675486.2	899	5	105	257	4	-149	multi-exon	FALSE	canonical	3	146	junction_1	53.9305108449753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	98	False	NA	NA	False	CATAAA	-25	NA	100335860	100328835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_87502.known	chr7	+	683	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	82.8666934835033	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	1	True	NA	4	True	AATAAA	-15	NA	100336124	100341328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
transcript_87504.known	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	242	junction_3	24.3082062046727	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	4	True	NA	-15	True	AATAAA	-21	NA	100335916	100329986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
transcript_87514.nnic	chr7	+	1874	5	NIC	ENSG00000146834.14	novel	2261	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	77.2410998109167	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	-2	True	NA	27	True	AATAAA	-27	NA	100428789	100434118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_100429041_100431029_100431690_100432918_100433138_100433262_100433390_100433501
transcript_87515.nic	chr7	+	1730	5	NIC	ENSG00000146834.14	novel	2822	4	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	75.5426204205282	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	51	False	NA	27	True	AATAAA	-27	NA	100429406	100434118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_100429514_100431029_100431690_100432918_100433138_100433262_100433390_100433501
transcript_87517.known	chr7	+	2822	4	FSM	ENSG00000146834.14	ENST00000310512.4	2822	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	17.2819751957543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	-5	True	NA	27	True	AATAAA	-27	NA	100429830	100434118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100431690_100432918_100433138_100433262_100433390_100433501
transcript_87518.known	chr7	-	666	2	FSM	ENSG00000078487.18	ENST00000479315.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTCACTGTGGCGCG	NA	False	NA	28	True	NA	NA	NA	100402043	100400825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100401337_100401888
transcript_87519.known	chr7	-	965	3	FSM	ENSG00000160813.7	ENST00000487452.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	62	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	269	False	NA	-23	True	AATAAA	-18	NA	100436423	100435281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100435534_100435630_100435768_100435847
transcript_87520.known	chr7	-	474	2	FSM	ENSG00000160813.7	ENST00000476185.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTCTTCTTGGAGGC	622	False	NA	-24	True	AATAAA	-17	NA	100436070	100435282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100435534_100435847
transcript_87521.known	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	48.0884601541784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	21	False	100479253	-30	True	ATTAAA	-19	NA	100479232	100466537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
transcript_87522.known	chr7	-	2318	5	FSM	ENSG00000166925.9	ENST00000300181.7	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	22.7307610959246	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-24	True	NA	-11	True	ATTAAA	-38	NA	100479214	100466518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478308_100478793
transcript_87523.known	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	22.7573327473064	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	9	True	NA	-9	True	AATAAA	-39	NA	100586129	100574010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
transcript_87527.known	chr7	+	1516	9	FSM	ENSG00000106333.13	ENST00000223061.6	1516	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	64.0248975008941	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCAGATCTCCATGCTT	-4	True	NA	27	True	AATAAA	-18	NA	100602362	100608175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_87528.nnic	chr7	+	1434	9	NNC	ENSG00000106333.13	novel	960	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	98.4872295021035	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	781	False	NA	23	True	AATAAA	-14	NA	100603182	100608171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_100603294_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_8754.nic	chr1	+	1553	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	51.9230199429887	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	-2	True	NA	NA	False	NA	NA	NA	174874391	174990409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_87547.known	chr7	+	1053	6	FSM	ENSG00000106330.12	ENST00000223054.8	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	115.352329842097	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTACTCATTTTCCA	3983	False	NA	-27	True	AAAACA	-6	NA	100612101	100615326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612242_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_87549.known	chr7	+	1154	5	FSM	ENSG00000106330.12	ENST00000393950.7	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	22.3941956765587	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	-15	True	NA	24	True	AATAAA	-21	NA	100612539	100615377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_87550.known	chr7	+	1115	5	FSM	ENSG00000106330.12	ENST00000424091.2	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	177.973839369723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	1	True	NA	31	True	AATAAA	-28	NA	100612555	100615384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612997_100613193_100613270_100613506_100613707_100614866_100615032_100615151
transcript_87551.known	chr7	+	1016	6	FSM	ENSG00000106330.12	ENST00000379527.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	165.218643015853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCAGAAATGTAGGGTA	43	False	NA	20	True	AATAAA	-17	NA	100612429	100615373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100612486_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_87552.known	chr7	-	2421	15	FSM	ENSG00000106327.13	ENST00000476304.5	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.40785520878506	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGTGGAGTTTCAATATC	9093	False	NA	NA	False	NA	NA	NA	100633650	100620462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415
transcript_87556.nic	chr7	-	731	6	ISM	ENSG00000077080.10	ENST00000160382.10	1524	14	9104	0	394	0	3prime_fragment	FALSE	canonical	3	21	junction_5	6.61513416341649	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	9068	False	NA	NA	False	AGTAAA	-20	NA	100647344	100643096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647086_100647222
transcript_87561.known	chr7	+	1524	9	FSM	ENSG00000172354.10	ENST00000393924.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_2	115.680324601896	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCCTTGCTGTGTTC	8	True	NA	34	True	CATAAA	-27	NA	100676137	100679174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_87563.known	chr7	+	850	2	FSM	ENSG00000172336.5	ENST00000303151.5	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	0	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCATCCCACTGCCA	-14	True	NA	18	True	AATAAA	-19	NA	100706120	100707486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100706305_100706820
transcript_87566.known	chr7	+	2269	14	FSM	ENSG00000146828.18	ENST00000540482.5	2269	14	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_13	26.3250055490927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGGAAAAATGAAAAGTC	-23	True	NA	NA	False	AATAAA	-20	NA	100852718	100865538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100852836_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865286
transcript_8757.known	chr1	+	2899	21	FSM	ENSG00000152061.24	ENST00000251507.8	2899	21	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	37.4466286867056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	-11	True	NA	16	True	AATAAA	-20	NA	174159516	174958182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174159658_174219124_174219296_174220971_174221165_174231144_174231356_174241482_174241658_174250474_174250633_174252479_174252591_174272413_174272481_174275832_174275936_174278612_174278780_174304985_174305128_174370978_174371073_174393994_174394146_174637374_174637489_174683521_174683597_174699524_174699651_174702112_174702257_174752312_174752355_174811831_174811961_174957456_174957550_174957890
transcript_87573.known	chr7	+	1912	12	FSM	ENSG00000146828.18	ENST00000415287.5	1912	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	30.7904138779728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGTTTAGGAAAAATGAAAA	-5	True	NA	NA	False	AATAAA	-17	NA	100852736	100865535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100852840_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865359
transcript_87574.known	chr7	-	369	2	FSM	ENSG00000236305.2	ENST00000412754.2	388	2	19	0	19	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTCTGACCTGCCTCC	3	True	NA	NA	False	NA	NA	NA	100852616	100837313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_100837580_100852513
transcript_87575.known	chr7	+	1693	9	FSM	ENSG00000087077.14	ENST00000200457.9	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_6	60.5050359474317	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	-15	True	NA	24	True	AAGAAA	-27	NA	100867386	100873454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_87578.nnic	chr7	+	1640	9	NNC	ENSG00000087077.14	novel	1693	9	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	238.518212092913	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	203	False	NA	24	True	AAGAAA	-27	NA	100867604	100873454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_100867772_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_87583.known	chr7	+	2990	20	FSM	ENSG00000087087.20	ENST00000611405.5	2990	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	227.220870739734	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	-46	True	NA	15	True	AATAAA	-16	NA	100875102	100888664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
transcript_87584.known	chr7	+	2955	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_17	177.158817272514	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	-23	True	NA	15	True	AATAAA	-16	NA	100875125	100888664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_87585.known	chr7	+	2964	20	FSM	ENSG00000087087.20	ENST00000614484.4	2964	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	229.78447085713	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	-23	True	NA	15	True	AATAAA	-16	NA	100875125	100888664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
transcript_87587.known	chr7	+	2893	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_17	180.583342228193	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	36	True	NA	15	True	AATAAA	-16	NA	100875184	100888664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_87598.nic	chr7	+	1272	8	ISM	ENSG00000087087.20	ENST00000611405.5	2990	20	-27	3866	-27	246	5prime_fragment	FALSE	canonical	3	638	junction_5	50.4801436008178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAGAAGAAAGAAGACT	-2	True	NA	28	True	AAAACA	-27	NA	100875075	100884798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739
transcript_87601.nic	chr7	-	726	2	ISM	ENSG00000087085.16	ENST00000412389.5	2218	4	2836	-3	2681	0	3prime_fragment	FALSE	canonical	3	32	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	5433	False	NA	-4	True	AATAAA	-13	NA	100891552	100889993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_100890336_100891168
transcript_87602.nnic	chr7	+	908	3	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGAGGCATTTAA	NA	False	NA	6	True	AATAAA	-21	NA	100922563	100943427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr7_+_100922817_100924559_100924691_100942903
transcript_87606.nnic	chr7	+	853	3	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGAGGCATTTAA	NA	False	NA	6	True	AATAAA	-21	NA	100922565	100943427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr7_+_100922817_100924612_100924691_100942903
transcript_87607.known	chr7	+	1093	4	FSM	ENSG00000169894.18	ENST00000614399.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	43.6882898116494	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATCCTGCACCCCAGT	27	False	NA	NA	False	NA	NA	NA	100966237	100967746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100966560_100966651_100966744_100966898_100966952_100967120
transcript_87608.nic	chr7	+	1424	3	ISM	ENSG00000169894.18	ENST00000614399.1	1093	4	362	-601	362	0	3prime_fragment	FALSE	canonical	3	250	junction_2	27.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCTCTGTCTGTCTCC	112	False	NA	33	True	AATACA	-20	NA	100966599	100968347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_100966744_100966898_100966952_100967120
transcript_87609.known	chr7	+	11248	12	FSM	ENSG00000169894.18	ENST00000379458.9	11248	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	111.458920275996	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCTCTGTCTGTCTCC	-4	True	NA	33	True	AATACA	-20	NA	100949533	100968347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_100949686_100951840_100960646_100960751_100960938_100963150_100963267_100963687_100963753_100964694_100964844_100965281_100965348_100965703_100965867_100966385_100966560_100966651_100966744_100966898_100966952_100967120
transcript_8761.known	chr1	+	710	7	FSM	ENSG00000152061.24	ENST00000465412.5	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	52.382142843615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAAGGAGTGAAATC	39	False	NA	NA	False	NA	NA	NA	174874470	174982900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833
transcript_87610.known	chr7	+	502	3	FSM	ENSG00000205277.10	ENST00000473098.5	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	18	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	NA	False	NA	16	True	AATAAA	-22	NA	101016877	101018939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101016946_101017574_101017664_101018594
transcript_87611.known	chr7	+	566	3	FSM	ENSG00000205277.10	ENST00000467414.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	-13	True	NA	13	True	AATAAA	-19	NA	101017262	101018936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101017398_101017574_101017664_101018594
transcript_87613.known	chr7	-	372	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	64	6	7	-5	multi-exon	FALSE	canonical	3	48	junction_2	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCCAGTGGTGGTATT	-3	True	NA	-6	True	AATAAA	-16	NA	101017601	101014324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101014440_101015197_101015268_101017414
transcript_87614.nnic	chr7	-	477	3	NNC	ENSG00000227053.2	novel	442	3	NA	NA	-1195	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	24.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	101018860	101014319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_101014440_101015197_101015268_101018573
transcript_87615.known	chr7	+	675	2	FSM	ENSG00000205277.10	ENST00000474482.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	58	False	NA	16	True	AATAAA	-22	NA	101017333	101018939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101017664_101018594
transcript_87617.known	chr7	+	3156	9	FSM	ENSG00000106366.9	ENST00000223095.5	3156	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_7	1.6583123951777	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTCAGGACAGTCAC	24	True	NA	5	True	AATAAA	-16	NA	101127103	101139247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101127245_101128392_101128665_101130420_101130655_101131874_101132070_101133694_101133894_101135493_101135595_101135714_101135802_101137000_101137085_101137404
transcript_87618.known	chr7	+	1226	5	FSM	ENSG00000106367.15	ENST00000337619.11	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	28.577744837548	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGGCCTTGGGCTCT	4	True	NA	39	True	AATAAA	-19	NA	101154475	101161276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101154518_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_87619.known	chr7	+	573	5	FSM	ENSG00000106367.15	ENST00000429457.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	79.6413837147497	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGAGGAGATGGGT	53	False	NA	NA	False	NA	NA	NA	101154524	101160537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101154653_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_87620.known	chr7	+	779	5	FSM	ENSG00000106367.15	ENST00000646560.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	83.9583229942095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCTGCCTTTGCAGAA	-8	True	NA	NA	False	NA	NA	NA	101154984	101160827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101155029_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_87626.known	chr7	-	2821	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_15	16.478287247687	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	12	True	NA	-11	True	AATAAA	-14	NA	101217581	101205983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
transcript_87630.nic	chr7	+	892	6	NIC	ENSG00000106400.12	novel	3958	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	520.849460017	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	-1	True	NA	34	True	AATAAA	-17	NA	101218167	101224190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_101218218_101218318_101218486_101222603_101222775_101223476_101223557_101223672_101223843_101223936
transcript_87631.known	chr7	+	728	5	FSM	ENSG00000106400.12	ENST00000305105.3	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_1	167.633528865797	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	-4	True	NA	34	True	AATAAA	-17	NA	101218164	101224190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101218218_101222603_101222775_101223476_101223557_101223672_101223843_101223936
transcript_87635.known	chr7	-	870	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_4	47.7094068292617	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTTCCTCCCTTTCC	-5	True	NA	NA	False	NA	NA	NA	101245081	101239471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
transcript_87636.known	chr7	-	1005	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	262.356984850794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	8	True	NA	-1	True	AATAAA	-21	NA	101252291	101239611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
transcript_87638.known	chr7	-	631	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	291.356597087944	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCGTTGAGGGGAGG	7251	False	NA	4	True	AATAAA	-26	NA	101245048	101239606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
transcript_87639.known	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	248.463724157516	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	1	True	NA	NA	False	NA	NA	NA	101245075	101239457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
transcript_87640.known	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	258.833279673744	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-17	True	NA	17	True	AATAAA	-39	NA	101252316	101239593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
transcript_87641.known	chr7	-	345	2	FSM	ENSG00000214252.4	ENST00000454506.2	345	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGAACAACAGACCGCG	NA	False	NA	NA	False	NA	NA	NA	101289771	101287481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101287744_101289688
transcript_87646.nnic	chr7	+	1571	4	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	826	2	NA	NA	-19	-16	multi-exon	FALSE	canonical	1	3	junction_2	129.543643439404	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	-1	True	NA	15	True	ATTAAA	-16	NA	101299593	101304562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_101299867_101300768_101301284_101302798_101303029_101304009
transcript_87648.nnic	chr7	+	1056	3	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	826	2	NA	NA	-19	-16	multi-exon	FALSE	canonical	3	27	junction_1	114	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	-1	True	NA	15	True	ATTAAA	-16	NA	101299593	101304562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_101299867_101302798_101303029_101304009
transcript_87649.known	chr7	+	867	2	FSM	ENSG00000232301.3	ENST00000429254.3	887	2	20	0	20	0	multi-exon	FALSE	canonical	3	296	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCGATTTTGCAAGAT	NA	False	NA	12	True	AATAAA	-17	NA	101299577	101301346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101299867_101300768
transcript_87650.nnic	chr7	+	826	2	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	887	2	NA	NA	-19	-16	multi-exon	FALSE	canonical	3	104	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	-1	True	NA	15	True	ATTAAA	-16	NA	101299593	101304562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_101299867_101304009
transcript_87651.known	chr7	-	4881	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	17.0055138117024	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-34	True	NA	-8	True	ATTAAA	-26	NA	101321812	101310913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
transcript_87655.known	chr7	-	917	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	102.704538469447	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAATACCGACTGGC	14	True	NA	25	True	NA	NA	NA	101321764	101314752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
transcript_87656.known	chr7	-	1727	4	FSM	ENSG00000128581.17	ENST00000440362.5	1727	4	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	19.6015872373189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTTGAATGTGATTT	-12	True	NA	-10	True	NA	NA	NA	101321790	101314787	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101318123_101319033_101321670
transcript_87657.known	chr7	-	875	4	FSM	ENSG00000128581.17	ENST00000437644.2	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	114.126635317479	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTGTATTGGCTTGAAT	1	True	NA	-17	True	NA	NA	NA	101321777	101314794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101318955_101319033_101321670
transcript_87665.known	chr7	+	1194	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	-13	True	NA	10	True	ATTAAA	-17	NA	101308295	101311343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101308549_101309613_101309695_101310483
transcript_87666.known	chr7	-	567	3	FSM	ENSG00000128581.17	ENST00000495166.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	126.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCACATCCAGCTCCTG	-45	True	NA	NA	False	NA	NA	NA	101321823	101315071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101315283_101316339_101316543_101321670
transcript_87667.known	chr7	-	923	3	FSM	ENSG00000128581.17	ENST00000485695.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	98.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACTCAGGAGGCTGAG	-7	True	NA	NA	False	AATACA	-38	NA	101321785	101315824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101316543_101318123_101318214_101321670
transcript_87669.known	chr7	+	4596	2	FSM	ENSG00000232445.2	ENST00000663483.1	4596	2	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTATCATTGGGCT	5480	False	NA	NA	False	ATTAAA	-2	NA	101308269	101314800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101308549_101310483
transcript_87670.known	chr7	-	1170	2	FSM	ENSG00000128581.17	ENST00000468833.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAGAAGACCTGGAAAG	-12	True	NA	NA	False	AATAGA	-23	NA	101321790	101315492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_101316543_101321670
transcript_87672.known	chr7	+	2929	23	FSM	ENSG00000257923.12	ENST00000622516.6	2929	23	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_17	40.0033056485326	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	0	True	NA	16	True	AATAAA	-16	NA	101816006	102283958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_87673.known	chr7	+	3026	23	FSM	ENSG00000257923.12	ENST00000437600.9	3026	23	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_10	47.9641739579769	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	NA	False	NA	16	True	AATAAA	-16	NA	101815903	102283958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178474_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_87675.known	chr7	+	2878	22	FSM	ENSG00000257923.12	ENST00000547394.6	2878	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.1106010254058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTGCCCTGTGCTCT	2	True	NA	15	True	AATAAA	-15	NA	101816008	102283957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101816094_101916114_101916226_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_87678.known	chr7	+	559	2	FSM	ENSG00000257923.12	ENST00000607092.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGGGGTGGAAGGTC	1	True	NA	NA	False	NA	NA	NA	101816007	101916587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_101816094_101916114
transcript_87681.known	chr7	+	2159	6	FSM	ENSG00000128563.13	ENST00000397912.3	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	32.8998480239651	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	-24	True	NA	10	True	AATAAA	-22	NA	102396362	102426666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_87686.known	chr7	+	491	5	FSM	ENSG00000239969.6	ENST00000484974.5	491	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	39.2706951810125	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTCTCATCATTATC	276	False	NA	37	True	TATAAA	-40	NA	102364161	102380633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102364207_102366017_102366077_102375822_102375950_102376211_102376323_102380484
transcript_87688.known	chr7	-	1405	3	FSM	ENSG00000160993.4	ENST00000490528.1	1405	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	66	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAACATTTTAAATGATT	-6	True	NA	NA	False	NA	NA	NA	102464863	102456833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102457982_102459603_102459711_102464713
transcript_87689.known	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	4.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-6	True	NA	-21	True	AATAAA	-20	NA	102464863	102456237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102457982_102459603_102459802_102464713
transcript_87694.known	chr7	+	2160	15	FSM	ENSG00000161036.13	ENST00000292616.10	2160	15	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_9	21.5545108683892	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAAAGGTGTTTCG	8	True	NA	20	True	ATTAAA	-19	NA	102464983	102473168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102465161_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102468378_102468553_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
transcript_87696.known	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2614	junction_3	164.719964384001	696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	6	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
transcript_8770.known	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	94.9116548281728	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	26	False	NA	16	True	AATAAA	-20	NA	174874457	174958182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
transcript_8771.nnic	chr1	+	505	3	NIC	ENSG00000152061.24	novel	648	4	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	42	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	-2	True	NA	21	True	AATAAA	-25	NA	174874391	174958187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_174874507_174957456_174957550_174957890
transcript_87712.nic	chr7	-	1676	9	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_8	662.884122132217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	NA	False	NA	-21	True	AATAAA	-16	NA	102572588	102537918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572442
transcript_87713.known	chr7	-	1598	9	FSM	ENSG00000168255.20	ENST00000379340.9	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	639.302158607336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	41	False	NA	-21	True	AATAAA	-16	NA	102572539	102537918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572471
transcript_87717.known	chr7	-	1598	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	305.631620582688	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAATGCCCCCAAAA	96	False	NA	-31	True	NA	NA	NA	102671641	102637048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
transcript_87720.known	chr7	-	1532	8	FSM	ENSG00000168255.20	ENST00000486319.5	1532	8	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	157.46603132234	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	NA	False	NA	-22	True	AATAAA	-15	NA	102572649	102537919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572471
transcript_87728.known	chr7	-	348	4	FSM	ENSG00000285437.2	ENST00000621093.4	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	853.941580099144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	59	False	NA	NA	False	NA	NA	NA	102572521	102567050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102567084_102568009_102568185_102569834_102569925_102572471
transcript_87733.known	chr7	-	348	4	FSM	ENSG00000228049.7	ENST00000333432.8	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	416.443140043018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	136	False	NA	NA	False	NA	NA	NA	102671601	102666130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102666164_102667089_102667265_102668914_102669005_102671551
transcript_87739.known	chr7	-	4630	3	FSM	ENSG00000285437.2	ENST00000511313.5	4630	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	216	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGAAAATTAGCTTTA	NA	False	NA	NA	False	AATAAA	-34	NA	102572583	102562655	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102567084_102569834_102569925_102572471
transcript_8774.known	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	128.971142336398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	25	False	NA	21	True	AATAAA	-25	NA	174875545	174958187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
transcript_87740.known	chr7	-	2096	3	ISM	ENSG00000168255.20	ENST00000489144.5	2553	8	-13	28370	3	-22720	5prime_fragment	FALSE	canonical	3	659	junction_2	796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAAGGTCC	0	True	NA	NA	False	NA	NA	NA	102572580	102566287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_102568185_102569834_102569925_102572471
transcript_87743.nnic	chr7	-	2060	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-39	1057	combination_of_known_splicesites	FALSE	canonical	3	168	junction_1	163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAAGTATCATGCT	69	False	NA	NA	False	NA	NA	NA	102671668	102664310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_87744.known	chr7	-	2065	3	FSM	ENSG00000228049.7	ENST00000358438.6	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAAAAGTCC	2	True	NA	NA	False	NA	NA	NA	102671629	102665367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102667265_102668914_102669005_102671551
transcript_87745.nnic	chr7	-	1020	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-39	17	combination_of_known_splicesites	FALSE	canonical	3	168	junction_1	163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGCTTGATGGCTCACA	69	False	NA	NA	False	AATAAA	-8	NA	102671668	102665350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_87746.nnic	chr7	-	325	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-39	85	combination_of_known_splicesites	FALSE	canonical	3	168	junction_1	163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	69	False	NA	NA	False	ATTAAA	-18	NA	102671668	102666045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_87747.known	chr7	-	1336	3	FSM	ENSG00000286830.1	ENST00000664535.1	1336	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGTTTGGTTTCACCTT	21	False	NA	NA	False	AATAAA	-13	NA	102748695	102699227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_102700259_102703314_102703528_102748603
transcript_87748.known	chr7	+	1958	8	FSM	ENSG00000222011.9	ENST00000420217.1	1958	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	8.99205998963212	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTACTGATTCTTAAT	-9	True	NA	14	True	AATAAA	-18	NA	102749009	102809224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_8775.known	chr1	+	2835	6	FSM	ENSG00000116161.18	ENST00000613570.4	2835	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1232.48454757048	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGTATAAAAACAA	6610	False	NA	NA	False	AATAAA	-24	NA	174999162	175011715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_174999690_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_87756.nic	chr7	+	2510	5	NIC	ENSG00000128606.13	novel	2002	5	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.41774882649672	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTTTCGATAGCTGTT	-1	True	NA	16	True	AATAAA	-25	NA	102912962	102944949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_102913146_102933058_102933578_102933773_102934686_102939429_102939586_102944209
transcript_87757.known	chr7	+	2116	4	FSM	ENSG00000128606.13	ENST00000339431.9	2116	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCCTGATACATCCAA	3	True	NA	21	True	AATAAA	-32	NA	102912999	102945111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_102913146_102933773_102934686_102939429_102939586_102944209
transcript_87758.known	chr7	+	2347	5	FSM	ENSG00000170632.14	ENST00000454559.5	2347	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	174.861909803136	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	-20	True	NA	14	True	AATAAA	-14	NA	103074880	103099758	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103097276_103097349_103098298
transcript_87760.known	chr7	-	4972	6	FSM	ENSG00000161048.12	ENST00000341533.8	4972	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.54217089351845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	-10	True	NA	-3	True	AATAAA	-22	NA	103149232	103099775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103103123_103103423_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_87762.known	chr7	-	5140	5	FSM	ENSG00000161048.12	ENST00000465647.6	5140	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	5.78791845139511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	1	True	NA	-3	True	AATAAA	-22	NA	103149099	103099775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_87763.known	chr7	-	1822	5	FSM	ENSG00000161048.12	ENST00000427257.5	1822	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	3.34477204006491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTTTCCATTCTT	19	False	NA	NA	False	NA	NA	NA	103149560	103103086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103149278
transcript_87764.known	chr7	-	2169	2	FSM	ENSG00000161048.12	ENST00000479761.1	2169	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATACAAAAAATTAG	-2	True	NA	NA	False	NA	NA	NA	103148976	103126789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103128793_103148810
transcript_87765.nic	chr7	-	2091	2	ISM	ENSG00000161048.12	ENST00000427257.5	1822	5	192	23705	-133	-2	5prime_fragment	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATACAAAAAATT	211	False	NA	NA	False	NA	NA	NA	103149368	103126791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_103128793_103149278
transcript_87769.known	chr7	-	2291	17	FSM	ENSG00000105821.15	ENST00000379263.8	2291	17	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_11	59.9864568048489	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTAGGAGCATTTTA	2	True	NA	NA	False	TATAAA	-18	NA	103344767	103312288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_87776.known	chr7	-	1846	15	FSM	ENSG00000105821.15	ENST00000249270.11	1846	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	114.039847135525	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTCCAACATAATTT	186	False	NA	37	True	NA	NA	NA	103344666	103312473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_87778.known	chr7	+	1509	13	FSM	ENSG00000105819.14	ENST00000453466.1	1509	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	187.714913869114	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAGCTAGAGAAAAATA	13	True	NA	47	True	ATTAAA	-41	NA	103297456	103312312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103297559_103298567_103298709_103299442_103299534_103300186_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055_103312132_103312206
transcript_8778.known	chr1	+	2869	6	FSM	ENSG00000116161.18	ENST00000367679.7	2869	6	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_4	104.535926838575	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCGAGGGACGAGA	-16	True	NA	NA	False	NA	NA	NA	174999946	175012027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_87783.known	chr7	+	3859	13	FSM	ENSG00000161057.13	ENST00000679205.1	3859	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	274.522413575933	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	NA	False	NA	NA	False	CATAAA	-19	NA	103344265	103370346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103344343_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_87784.known	chr7	+	3988	13	FSM	ENSG00000161057.13	ENST00000679341.1	3988	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	275.311780330753	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	NA	False	NA	NA	False	CATAAA	-19	NA	103344319	103370346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103344526_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_87789.known	chr7	+	1714	12	FSM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_8	46.0509958076482	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTATTAATGGT	-9	True	NA	34	True	ATTAAA	-45	NA	103297434	103312415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055
transcript_87809.known	chr7	+	2479	9	FSM	ENSG00000161057.13	ENST00000679250.1	2479	9	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	317.538186679964	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACACATTTAGAACACA	-26	True	NA	-6	True	ATTAAA	-4	NA	103347635	103369375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_103347782_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_87815.known	chr7	-	854	8	FSM	ENSG00000105821.15	ENST00000454277.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	137.738587067484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-9	True	NA	NA	False	AAAAAG	-7	NA	103344778	103322726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341866_103344558
transcript_87816.nic	chr7	-	1020	8	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-199	10263	-35	0	5prime_fragment	FALSE	canonical	3	293	junction_2	48.8813640879839	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAATGAACAGAAT	NA	False	NA	NA	False	AAGAAA	-2	NA	103344865	103322736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_8782.known	chr1	+	1059	6	FSM	ENSG00000116161.18	ENST00000405362.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	1242.45167310443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAAAGTCGTTTTGGG	79	False	NA	NA	False	NA	NA	NA	175000212	175010079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_175000600_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_87826.known	chr7	-	1924	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_5	26.5835736975401	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTATTTATCTTT	-4	True	NA	-1	True	AATAAA	-24	NA	104208013	104126340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_8783.known	chr1	+	804	5	FSM	ENSG00000116161.18	ENST00000473925.1	804	5	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_4	97.5320460156558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATTTTTAATAGTTT	-8	True	NA	NA	False	TTTAAA	-24	NA	174999954	175008754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608
transcript_87841.known	chr7	-	1409	9	FSM	ENSG00000164815.11	ENST00000447452.6	1409	9	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	26.7756885999221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGCAAATATTGAAAAAAA	52	False	NA	NA	False	ATTAAA	-25	NA	104207957	104167993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_87844.known	chr7	-	1214	7	FSM	ENSG00000164815.11	ENST00000485726.1	1214	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	91.8212333226302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATATATCTGAGGCTGG	0	True	NA	NA	False	NA	NA	NA	104208009	104187542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_104187968_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_87846.known	chr7	-	686	2	FSM	ENSG00000228393.5	ENST00000445184.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTTTTAAAACATGT	22	True	NA	NA	False	NA	NA	NA	105013024	104982098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_104982692_105012931
transcript_87852.known	chr7	+	2523	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	27.3436184399167	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	18	True	NA	NA	False	AATAAA	-16	NA	105014217	105091609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_87855.nic	chr7	+	2042	14	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-54	1477	0	0	5prime_fragment	FALSE	canonical	3	30	junction_1	27.6221333086478	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	712	False	NA	-2	True	AAAAAG	-9	NA	105014163	105090132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_87857.known	chr7	+	1745	14	FSM	ENSG00000005483.22	ENST00000667857.1	1745	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	36.0856968173388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACCAGACGGAAAAAAGGA	149	False	NA	-28	True	NA	NA	NA	105014431	105090106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105068474_105068546_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_87859.nic	chr7	+	2190	14	NIC	ENSG00000005483.22	novel	5524	27	NA	NA	0	-313	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	18.7919156733569	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAAGGAAGATGGT	712	False	NA	9	True	AATGAA	-31	NA	105014163	105091296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_87863.nic	chr7	+	1968	13	NIC	ENSG00000005483.22	novel	5524	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	18.9824480332051	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	712	False	NA	-2	True	AAAAAG	-9	NA	105014163	105090132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_87871.known	chr7	+	1500	10	FSM	ENSG00000005483.22	ENST00000478990.5	1500	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	32.9706191691188	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	6	True	NA	-2	True	AAAAAG	-9	NA	105014205	105090132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105014536_105040838_105041024_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_87873.nic	chr7	+	1485	9	ISM	ENSG00000005483.22	ENST00000257745.9	5524	27	0	35465	0	-134	5prime_fragment	FALSE	canonical	3	60	junction_4	14.3243673507768	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATACATCATTTGTCCA	712	False	NA	85	True	NA	NA	NA	105014163	105077193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962
transcript_87877.known	chr7	+	1133	7	FSM	ENSG00000005483.22	ENST00000495267.5	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	16.327379867368	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	8	True	NA	NA	False	GATAAA	-14	NA	105014207	105074777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
transcript_87882.nic	chr7	+	600	2	ISM	ENSG00000005483.22	ENST00000495267.5	1133	7	-44	33711	0	210	5prime_fragment	FALSE	canonical	3	68	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	712	False	NA	NA	False	TTTAAA	-31	NA	105014163	105041066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_105014536_105040838
transcript_87883.known	chr7	-	3679	16	FSM	ENSG00000135250.17	ENST00000393651.8	3679	16	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_14	32.751183184734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	-16	True	NA	-2	True	ATTAAA	-26	NA	105388921	105116373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_87888.known	chr7	-	3700	15	FSM	ENSG00000135250.17	ENST00000357311.7	3700	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	75.4483537370608	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTGCCTTGGTCATTG	23	True	NA	-5	True	ATTAAA	-23	NA	105269015	105116376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805
transcript_87889.known	chr7	-	3480	16	FSM	ENSG00000091127.14	ENST00000356362.6	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	75.3548641797964	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGATAAGAATCTT	9822	False	105522271	-7	True	AATAAA	-20	NA	105522258	105456510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_87890.known	chr7	-	3525	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_4	27.8990242760487	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	0	True	NA	1	True	AATAAA	-28	NA	105522271	105456502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_87897.nic	chr7	-	1566	10	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	14	15538	1	-1755	5prime_fragment	FALSE	canonical	3	349	junction_9	24.8596057893121	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGTTTCAGTATTTT	9823	False	105522271	0	True	AATAAA	-19	NA	105522257	105472040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_87898.nnic	chr7	-	640	3	Antisense	novelGene_ENSG00000223886.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCACTCTGTTTTATTGT	-5	True	NA	-14	True	AATAAA	-11	NA	105532085	105530036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_-_105530458_105531496_105531652_105532021
transcript_8790.known	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	469	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	9	True	NA	NA	False	NA	NA	NA	175023415	175014244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_175014852_175018417_175018577_175023271
transcript_87903.known	chr7	+	2860	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_8	14.4739385779816	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	5	True	NA	9	True	AATAAA	-16	NA	105532200	105567677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_87908.known	chr7	-	737	5	FSM	ENSG00000185055.11	ENST00000480514.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	6.96419413859206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	-17	True	NA	NA	False	AATAAA	-1	NA	105581493	105565123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105565448_105567466_105567491_105569202_105569291_105569406_105569572_105581357
transcript_87909.known	chr7	-	1550	4	FSM	ENSG00000185055.11	ENST00000486180.5	1550	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTCAAATGTTTAAGG	-10	True	NA	NA	False	NA	NA	NA	105581486	105566322	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_105567491_105569202_105569291_105569406_105569572_105581357
transcript_8791.known	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_2	18	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-1	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_175014852_175018417_175018577_175023363
transcript_87917.nic	chr7	-	2550	4	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38774	0	-14978	0	3prime_fragment	FALSE	canonical	3	64	junction_1	15.9373774505092	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	3169	False	NA	-1	True	ATTAAA	-16	NA	105639244	105613473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352
transcript_87921.nic	chr7	-	1255	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38831	6621	-14921	138	internal_fragment	FALSE	canonical	3	82	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTGAAGTCAGGATGC	3226	False	NA	NA	False	AATAAA	-31	NA	105639187	105620094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105620322_105624074_105624268_105638352
transcript_87923.nic	chr7	-	1436	2	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38664	10360	-15088	-3601	internal_fragment	FALSE	canonical	3	103	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAAATGGATAATCC	3059	False	NA	NA	False	AAAAAG	-7	NA	105639354	105623833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_105624268_105638352
transcript_87924.nic	chr7	-	2278	6	NIC	ENSG00000008282.9	novel	2127	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	290.333187906584	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	275	False	NA	NA	False	AATAAA	-15	NA	106112338	106090504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_106091940_106092547_106092670_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_87925.known	chr7	-	1193	6	FSM	ENSG00000008282.9	ENST00000470347.1	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	281.664339240877	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAAAACCTTTATTT	46	True	NA	NA	False	AAAACA	-22	NA	106112221	106091456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106091940_106092563_106092670_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_87933.known	chr7	-	2130	5	FSM	ENSG00000008282.9	ENST00000455385.7	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	28.1424945589406	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	301	False	106112346	NA	False	AATAAA	-15	NA	106112312	106090504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_87937.known	chr7	-	4489	11	FSM	ENSG00000105835.13	ENST00000681550.1	4489	11	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_10	154.341698837352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGTGTTAAATTTGTGT	1279	False	NA	-13	True	AATAAA	-27	NA	106284632	106248297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284347
transcript_87938.known	chr7	-	4360	11	FSM	ENSG00000105835.13	ENST00000222553.8	4360	11	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_6	37.5085323626505	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGTGTTAAATTTGTGT	13	True	NA	-13	True	AATAAA	-27	NA	106284983	106248297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_87942.known	chr7	-	1853	11	FSM	ENSG00000105835.13	ENST00000681887.1	1853	11	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_10	194.175796637995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACAGTCTTTCCAACTT	1225	False	NA	NA	False	NA	NA	NA	106284686	106250671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284663
transcript_87944.known	chr7	-	2464	10	FSM	ENSG00000105835.13	ENST00000679951.1	2464	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	203.551855861575	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	938	False	NA	-24	True	ATTAAA	-18	NA	106284973	106250042	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_87945.known	chr7	-	1848	10	FSM	ENSG00000105835.13	ENST00000680152.1	1848	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	203.265805423148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGTGTTATTGTACA	-4	True	NA	NA	False	AATAAA	-17	NA	106284951	106250551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_87947.known	chr7	-	1495	8	FSM	ENSG00000105835.13	ENST00000354289.9	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_3	39.0143877176048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTTGGTA	719	False	NA	NA	False	TATAAA	-17	NA	106285192	106261489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_87949.known	chr7	-	878	4	FSM	ENSG00000105835.13	ENST00000441045.6	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAAAGGAACTTTATTCC	-4	True	NA	NA	False	GATAAA	-12	NA	106284951	106272165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106272659_106274945_106275050_106277022_106277180_106284827
transcript_8795.known	chr1	-	4548	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	8.9566858950296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTCTGCCATATTTCT	5	True	NA	-2	True	AATAAA	-21	NA	175192776	175156985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
transcript_87950.known	chr7	+	847	1	FSM	ENSG00000273320.1	ENST00000609281.1	847	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGAAGTCAGTATATA	19	True	NA	NA	False	AATAAA	-21	NA	106285479	106286326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_106285500_106286300
transcript_87951.known	chr7	-	4457	11	FSM	ENSG00000105835.13	ENST00000680584.1	4457	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	197.658189812616	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTATTAGTGAAGTGT	817	False	NA	-24	True	AATAAA	-16	NA	106285094	106248308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284827
transcript_87952.known	chr7	-	2598	11	FSM	ENSG00000105835.13	ENST00000681878.1	2598	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	197.591497792795	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTTATTAATTTTAAA	940	False	NA	-20	True	ATTAAA	-22	NA	106284971	106250038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275041_106277022_106277180_106284827
transcript_87953.known	chr7	-	2265	11	FSM	ENSG00000105835.13	ENST00000681936.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	234.355819215141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAATGTCTAGGCACT	0	True	NA	NA	False	ATTAAA	-16	NA	106284544	106250430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284347
transcript_87954.known	chr7	+	3689	11	FSM	ENSG00000005249.13	ENST00000265717.5	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	281	junction_5	51.9893258275196	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATGTCATTATTTA	-10	True	NA	13	True	ATTAAA	-16	NA	107044704	107161811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107157185_107157325_107159448
transcript_87956.known	chr7	-	4658	22	FSM	ENSG00000164597.15	ENST00000297135.9	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	15.8128223753359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTAATCCTATATAT	-5	True	NA	-21	True	AATAAA	-30	NA	107563920	107201371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_87961.known	chr7	-	5418	21	FSM	ENSG00000164597.15	ENST00000393603.7	5418	21	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	16.0078105935821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCTTCCTGTTTTCTT	233	False	NA	NA	False	AATAAA	-18	NA	107564261	107207847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_87970.known	chr7	+	2704	11	FSM	ENSG00000105856.14	ENST00000468410.5	2704	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	32.996363435991	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTATCTCTG	833	False	NA	14	True	AATAAA	-6	NA	107168960	107202508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_87972.known	chr7	+	2834	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	49.6624606720207	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	4	True	NA	28	True	AATAAA	-20	NA	107169002	107202522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_87975.nic	chr7	+	1628	10	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	11	2177	11	0	5prime_fragment	FALSE	canonical	3	100	junction_1	34.0047200790467	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTATCCGTGCAGG	844	False	NA	3	True	AATAAA	-16	NA	107168971	107200331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159
transcript_87978.nic	chr7	+	1765	10	ISM	ENSG00000105856.14	ENST00000222574.9	2834	11	-10	2191	3	0	5prime_fragment	FALSE	canonical	3	40	junction_1	52.0899032893262	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTATCCGTGCAGG	-6	True	NA	3	True	AATAAA	-16	NA	107168992	107200331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159
transcript_87979.nic	chr7	+	1503	9	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	11	6310	11	225	5prime_fragment	FALSE	canonical	3	100	junction_1	35.9687364248454	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTTCATGGTAACTGGA	844	False	NA	NA	False	AATAAA	-16	NA	107168971	107196198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
transcript_87980.nic	chr7	+	2427	9	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	11	5386	11	0	5prime_fragment	FALSE	canonical	3	100	junction_1	35.9687364248454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTGCCTGTACCCTTA	844	False	NA	13	True	AATAAA	-22	NA	107168971	107197122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
transcript_87985.known	chr7	+	1157	9	FSM	ENSG00000075790.12	ENST00000445771.6	1157	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	85.7292248885991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTCCAAAATTAGAAGTT	18	True	NA	14	True	AATAAA	-23	NA	107580264	107618664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107613653_107613733_107618327
transcript_87989.nic	chr7	+	2027	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-1	-103	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	21.1119465164699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTTTGTTTTGCCAA	-16	True	NA	10	True	AATAAA	-17	NA	107563956	107578420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_8799.nic	chr1	-	1170	2	ISM	ENSG00000235750.10	ENST00000567124.5	581	5	-34	15658	-33	-15641	5prime_fragment	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCATG	-4	True	NA	NA	False	AAGAAA	-31	NA	175192809	175176684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_175177685_175192639
transcript_87993.known	chr7	+	1676	8	FSM	ENSG00000105865.11	ENST00000443233.5	1676	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.1174740160604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATGGGTAGAGTGGGA	15	True	NA	NA	False	NA	NA	NA	107563987	107577850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573884_107575187_107575311_107576365_107576593_107577312
transcript_87994.known	chr7	+	2266	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13.6785248040981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	-2	True	NA	113	True	AATGAA	-16	NA	107563970	107578523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_87997.known	chr7	+	2911	8	FSM	ENSG00000075790.12	ENST00000005259.9	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	22.5125815163569	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTGCATATTAAATT	-1	True	NA	12	True	AATAAA	-20	NA	107580245	107620478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_88.known	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1392	junction_4	896.223325962899	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
transcript_880.known	chr1	+	786	5	FSM	ENSG00000162493.17	ENST00000510906.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_4	90.3908181177712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCGTGCCTGTAGTCTC	61	True	NA	NA	False	AATAGA	-26	NA	13583832	13614514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299
transcript_88000.nic	chr7	+	1017	8	NIC	ENSG00000075790.12	novel	2911	8	NA	NA	-16	-83	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	65.3121234487729	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTTGTGATTATTTGT	-17	True	NA	7	True	AATAAA	-18	NA	107580229	107621870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107621629
transcript_88002.known	chr7	+	1375	7	FSM	ENSG00000105865.11	ENST00000431839.5	1375	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	25.1047804212664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	7	True	NA	NA	False	AATAAA	-2	NA	107563979	107577909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576365_107576593_107577312
transcript_88010.known	chr7	+	942	7	FSM	ENSG00000075790.12	ENST00000465919.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	73.291654822815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGGTGGCTGTTTAC	-1	True	NA	-35	True	AATATA	-41	NA	107580245	107618615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107580302_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_8802.known	chr1	-	770	6	FSM	ENSG00000242193.11	ENST00000512906.2	770	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	8.38093073590279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATCTTGGAGTCAC	16	True	NA	NA	False	NA	NA	NA	178037947	178007965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_178008150_178022439_178022669_178026154_178026256_178034704_178034802_178037693_178037802_178037896
transcript_88021.known	chr7	+	573	7	FSM	ENSG00000105879.12	ENST00000432748.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	153.678958293653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTCTCTTCATGTGT	-5	True	NA	NA	False	NA	NA	NA	107744141	107758180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107744177_107748879_107749048_107752544_107752618_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_88023.known	chr7	+	3987	6	FSM	ENSG00000105879.12	ENST00000440859.8	3987	6	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	64.8647824323801	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTAGATGAATTTTT	-5	True	NA	NA	False	AATAAA	-19	NA	107744141	107761667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_88026.known	chr7	+	560	5	FSM	ENSG00000105879.12	ENST00000487517.1	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	58.6110057924278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAACATACAGACATGGC	-2	True	NA	NA	False	ATTAAA	-31	NA	107744144	107755592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417
transcript_88027.known	chr7	-	553	2	FSM	ENSG00000241764.5	ENST00000609979.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAAGGAGCACAATTA	528	False	NA	NA	False	NA	NA	NA	107744050	107742968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107743404_107743932
transcript_88028.known	chr7	-	772	2	FSM	ENSG00000241764.5	ENST00000663315.2	776	2	1	3	1	2	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTGTAGTTGTACGG	3	True	NA	-2	True	AATAAA	-20	NA	107743606	107742753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_107743404_107743484
transcript_88034.known	chr7	+	3537	14	FSM	ENSG00000091140.15	ENST00000205402.10	3537	14	0	0	0	0	multi-exon	FALSE	canonical	3	974	junction_10	113.609733727499	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTTATCTACTAAGC	14	True	NA	29	True	AATAAA	-33	NA	107891182	107921198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_8804.known	chr1	-	2921	10	FSM	ENSG00000242193.11	ENST00000476232.6	2921	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.16472842006823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATCCTCCTTTCTA	13	True	NA	NA	False	AATAAA	-18	NA	178037950	178006135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_178008150_178022439_178022669_178024403_178024487_178026154_178026256_178031550_178031661_178032429_178032496_178033026_178033086_178034704_178034802_178037693_178037802_178037896
transcript_88040.known	chr7	+	1993	13	FSM	ENSG00000091140.15	ENST00000440410.5	1993	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	339.91456238623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTATAAACCGAACT	4	True	NA	-16	True	NA	NA	NA	107891172	107919713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_88045.known	chr7	-	4569	11	FSM	ENSG00000135241.17	ENST00000257694.13	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	29.5805679458661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGCTTCTTTCTTTCT	-20	True	NA	NA	False	AATACA	-19	NA	108526135	108470416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108521475_108521522_108526028
transcript_88051.known	chr7	-	3462	10	FSM	ENSG00000135241.17	ENST00000436062.5	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	30.1809358517739	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTATCATTAACAAAAATA	1842	False	NA	-48	True	TATAAA	-27	NA	108526318	108471660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_88054.known	chr7	-	4268	10	FSM	ENSG00000135241.17	ENST00000426128.6	4268	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	54.7792427119869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCATGGCTTCTTTC	44	True	NA	NA	False	AATACA	-14	NA	108526071	108470421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108472676_108479183_108479380_108487944_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_88060.known	chr7	-	3384	3	FSM	ENSG00000177683.14	ENST00000415914.4	3384	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	13	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCTGAAAATCCAAAATG	-42	True	NA	89	True	AATAAA	-18	NA	108569706	108562131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_108565106_108565829_108566023_108569489
transcript_88063.known	chr7	+	2409	3	FSM	ENSG00000128590.5	ENST00000249356.4	2409	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	9.5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGCTGAGGATTATCT	-8	True	NA	9	True	AATAAA	-18	NA	108569873	108574850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_108570104_108571716_108571944_108572898
transcript_88073.nnic	chr7	-	658	4	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-127	-11816	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	6.16441400296898	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTGTTAATT	NA	False	NA	2	True	AATAAA	-22	NA	109597293	109533796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109597040
transcript_8808.known	chr1	+	7492	20	FSM	ENSG00000116191.19	ENST00000367635.8	7492	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	15.2184463081236	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	-3	True	NA	-84	True	AATAAA	-14	NA	178725243	178921840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_88080.known	chr7	-	1205	7	FSM	ENSG00000184903.10	ENST00000331762.7	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	21.0765799460496	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCCTGTTTTGAGTA	NA	False	NA	-8	True	AATAAA	-12	NA	111562517	110663053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850_111561924_111562463
transcript_88081.known	chr7	+	1736	12	FSM	ENSG00000198839.10	ENST00000361946.8	1736	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2719714889747	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCAGTCTCCTCCCCA	-9	True	NA	80	True	TATAAA	-18	NA	112206694	112343094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112206808_112286876_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083_112330217_112336103_112336172_112337729_112337827_112339842_112339886_112340871_112341047_112342560
transcript_88088.known	chr7	+	1075	7	FSM	ENSG00000198839.10	ENST00000450657.1	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	13.7406533889606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATTTGGATATCCAC	-3	True	NA	NA	False	NA	NA	NA	112206700	112330474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112206808_112286872_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083
transcript_88089.known	chr7	+	1834	13	FSM	ENSG00000006652.15	ENST00000005558.8	1834	13	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	87.7114904419914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAAGACTATTTTCTA	-16	True	NA	NA	False	NA	NA	NA	112423143	112475527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112423433_112450507_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_88092.known	chr7	+	3269	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	48.8157270417185	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTGTTTTTGAG	1	True	NA	21	True	AATAAA	-35	NA	112450459	112477203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_88094.known	chr7	+	3397	12	FSM	ENSG00000006652.15	ENST00000535603.5	3397	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	95.7589950029079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	140	False	NA	18	True	AATAAA	-32	NA	112452057	112477200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112452512_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_88098.known	chr7	+	1938	4	FSM	ENSG00000006652.15	ENST00000429071.5	1938	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	10.7082522694727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTAATAAATGTATT	-1	True	NA	NA	False	NA	NA	NA	112450457	112458336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913
transcript_88104.known	chr7	-	7276	5	FSM	ENSG00000146802.13	ENST00000312814.11	7276	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	18.7932833746528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCATTAATTTTTAATAT	-2	True	NA	NA	False	ATTAAA	-29	NA	112790393	112762376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112790159
transcript_88109.known	chr7	-	1291	4	FSM	ENSG00000146802.13	ENST00000447395.5	1291	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	60.5034434281774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTATGCTGTATTTT	291	False	NA	NA	False	NA	NA	NA	112790423	112767135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112790159
transcript_8811.known	chr1	+	1970	10	FSM	ENSG00000116191.19	ENST00000495034.5	1970	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	15.1860885006843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	317	False	NA	NA	False	AAAAAG	-16	NA	178725164	178879788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901
transcript_88111.known	chr7	-	3940	5	FSM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	10.779030568655	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-22	True	NA	-2	True	ATTAAA	-20	NA	112939875	112819146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
transcript_88113.known	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	168.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-6	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_113117608_113118067_113118162_113118439
transcript_88114.known	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	54.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	0	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_113117608_113118067_113118162_113118527
transcript_88115.known	chr7	+	816	5	FSM	ENSG00000225535.7	ENST00000669990.1	816	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	115030647	115125935	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_115030769_115031786_115031826_115118732_115118826_115122177_115122248_115125442
transcript_88116.known	chr7	+	2953	3	FSM	ENSG00000105971.15	ENST00000222693.5	2953	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGTATTGCTTTT	10	True	NA	16	True	AATAAA	-16	NA	116499737	116508541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116499932_116500259_116500448_116505970
transcript_88118.known	chr7	+	2736	7	FSM	ENSG00000135269.18	ENST00000358204.9	2736	7	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	19.3254294188311	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	1	True	NA	NA	False	AATAAA	-17	NA	116210538	116258783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_88120.nic	chr7	+	1516	6	ISM	ENSG00000135269.18	ENST00000358204.9	2736	7	-8	6045	-8	0	5prime_fragment	FALSE	canonical	3	198	junction_2	19.6977156035922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAATGGGAATGAGATT	-7	True	NA	NA	False	AATAAA	-18	NA	116210530	116252738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317
transcript_88127.known	chr7	+	2456	3	FSM	ENSG00000105974.13	ENST00000341049.7	2456	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	49.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	0	True	NA	16	True	AATAAA	-18	NA	116525035	116561179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116525093_116526524_116526690_116558945
transcript_8813.nic	chr1	+	561	5	ISM	ENSG00000116191.19	ENST00000495034.5	1970	10	26	71708	26	-71708	5prime_fragment	FALSE	canonical	3	103	junction_2	5.97390157267426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTCTGCACCAAATGC	-10	True	NA	NA	False	AATAAA	-10	NA	178725190	178808080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044
transcript_88130.known	chr7	+	1653	3	FSM	ENSG00000105974.13	ENST00000451122.5	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	55	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCTCAACTGCCTA	8	True	NA	NA	False	AAAAAG	-8	NA	116525008	116559636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116525806_116526524_116526690_116558945
transcript_88133.known	chr7	+	845	3	FSM	ENSG00000105974.13	ENST00000393468.1	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	50.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTTATTTGCATGT	469	False	NA	87	True	TTTAAA	-21	NA	116526276	116559513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116526389_116526524_116526690_116558945
transcript_88136.nnic	chr7	+	2431	3	NIC	ENSG00000105974.13	novel	845	3	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	58.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	516	False	NA	16	True	AATAAA	-18	NA	116526323	116561179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_116526389_116526557_116526690_116558945
transcript_88137.known	chr7	+	2628	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	485	False	NA	13	True	AATAAA	-15	NA	116526292	116561176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116526690_116558945
transcript_88142.nic	chr7	+	1120	2	ISM	ENSG00000105976.16	ENST00000318493.11	6876	21	179	98390	-15	388	5prime_fragment	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAGAAAAAAGAGATC	-28	True	NA	NA	False	NA	NA	NA	116672374	116699987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_116672578_116699070
transcript_88145.known	chr7	+	1214	10	FSM	ENSG00000198898.15	ENST00000426421.5	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	454.283318352472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATGTCTTTTGGTTTA	19	True	NA	NA	False	NA	NA	NA	116862599	116918188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910212_116910312_116912068_116912141_116916059_116916123_116917726
transcript_88149.known	chr7	+	5068	10	FSM	ENSG00000198898.15	ENST00000361183.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	70.8895855068524	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGTTCATTGCAAATG	6	True	NA	NA	False	ATTAAA	-18	NA	116862586	116922049	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910232_116910312_116912068_116912141_116916059_116916123_116917726
transcript_8815.known	chr1	+	2031	6	FSM	ENSG00000186283.14	ENST00000367627.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	68.818602136341	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	12	True	NA	19	True	ATTAAA	-20	NA	179082069	179095996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_179082388_179082939_179083054_179085627_179085894_179087910_179088090_179094092_179094218_179094967
transcript_88157.known	chr7	+	621	2	FSM	ENSG00000198898.15	ENST00000461878.5	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCATGCT	22	True	NA	NA	False	NA	NA	NA	116862602	116888699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116862651_116888126
transcript_88158.known	chr7	+	2899	16	FSM	ENSG00000004866.22	ENST00000265437.9	2899	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	23.1932940499811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTAGTGGTCTCTGC	-5	True	NA	NA	False	AATAAA	-19	NA	116953326	117223907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117222860
transcript_88159.known	chr7	+	2093	16	FSM	ENSG00000004866.22	ENST00000323984.8	2093	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	20.9799904671094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGGGAACCTGGATC	3	True	NA	8	True	AATAAA	-19	NA	116953500	117230176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_88163.known	chr7	+	2110	15	FSM	ENSG00000004866.22	ENST00000393451.7	2110	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	23.0111995802576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTATCCTCCTGTGT	10	True	NA	-65	True	AATAAA	-21	NA	116953341	117230103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_88167.known	chr7	-	570	4	FSM	ENSG00000077063.11	ENST00000454375.5	570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.6637929966641	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCTCTCAGGCAAAGT	-2	True	NA	-65	True	NA	NA	NA	117872220	117792661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_117792782_117810764_117810990_117861208_117861317_117872103
transcript_8817.nic	chr1	+	1405	3	ISM	ENSG00000186283.14	ENST00000367627.8	2031	6	5769	0	2041	0	3prime_fragment	FALSE	canonical	3	344	junction_1	18	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	5733	False	NA	19	True	ATTAAA	-20	NA	179087838	179095996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_179088090_179094092_179094218_179094967
transcript_88170.known	chr7	+	12384	4	FSM	ENSG00000128534.8	ENST00000249299.7	12384	4	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_3	53.1308656892478	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAATGTCCATGTTTTT	-3	True	NA	NA	False	AATAAA	-18	NA	118184163	118204035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_118184255_118185653_118185695_118188277_118188406_118191911
transcript_88171.nic	chr7	+	602	4	NIC	ENSG00000128534.8	novel	1920	3	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	312.463686779049	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	-19	True	NA	-7	True	ATTAAA	-29	NA	118184107	118192164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_118184281_118185646_118185695_118188277_118188406_118191911
transcript_88172.known	chr7	+	4030	3	FSM	ENSG00000128534.8	ENST00000424702.1	4030	3	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	51	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTTTTTTTTT	17	True	NA	-16	True	ATTAAA	-20	NA	118184143	118192155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_118184255_118185653_118185695_118188277
transcript_88179.nic	chr7	-	2830	9	NIC	ENSG00000106025.9	novel	2585	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	97.3510882065527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-39	True	NA	-2	True	AATAAA	-18	NA	120858146	120787319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_120788898_120806548_120806693_120810462_120810571_120814004_120814248_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_8818.known	chr1	+	6840	16	FSM	ENSG00000057252.13	ENST00000367619.8	6840	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.2879565117552	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTTCTGATTCATT	-14	True	NA	29	True	ATTAAA	-19	NA	179293796	179358680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_179293937_179302676_179302803_179323436_179323496_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
transcript_88180.known	chr7	-	1495	9	FSM	ENSG00000106025.9	ENST00000415871.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.8998396431432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATACCCACTGTGTAG	-1	True	NA	NA	False	NA	NA	NA	120858323	120788373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819_120857989_120858203
transcript_88182.nnic	chr7	-	2423	8	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	84.7866470041367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	1155	False	NA	-2	True	AATAAA	-18	NA	120857167	120787319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857004
transcript_88184.nic	chr7	-	2405	8	NIC	ENSG00000106025.9	novel	2585	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	81.6997989156469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	1092	False	NA	-2	True	AATAAA	-18	NA	120857230	120787319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857085
transcript_88185.nic	chr7	-	2391	8	NIC	ENSG00000106025.9	novel	2585	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	83.4141376946794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	959	False	NA	-2	True	AATAAA	-18	NA	120857363	120787319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857232
transcript_88187.known	chr7	-	2585	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	16.5788160873189	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-37	True	NA	-2	True	AATAAA	-18	NA	120858144	120787319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_88193.nnic	chr7	-	523	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-10	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	30	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	959	False	NA	-15	True	AATAAA	-19	NA	120857363	120855125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_120855382_120856697_120856834_120857232
transcript_88195.nnic	chr7	-	719	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-2	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	84.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	-39	True	NA	-15	True	AATAAA	-19	NA	120858146	120855125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_120855382_120856697_120856834_120857819
transcript_88196.known	chr7	+	3749	12	FSM	ENSG00000071243.16	ENST00000315870.10	3749	12	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	25.1323768003817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAGTGTTTGATAA	-9	True	NA	12	True	AATAAA	-22	NA	120950776	120977216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_88199.known	chr7	+	1718	11	FSM	ENSG00000071243.16	ENST00000427726.5	1718	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	50.0779392547257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGCTTCTAAAAAGAA	-1	True	NA	NA	False	TATAAA	-22	NA	120950784	120975290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_88202.known	chr7	+	1222	5	FSM	ENSG00000071243.16	ENST00000339121.9	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	67.2992384800898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATTCATCTC	NA	False	NA	8	True	CATAAA	-20	NA	120950762	120956980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120956159
transcript_88203.known	chr7	+	1723	4	FSM	ENSG00000071243.16	ENST00000445699.5	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	9.17726659862414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTATTCATC	9	True	NA	6	True	CATAAA	-18	NA	120950794	120956978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558
transcript_88204.known	chr7	+	1447	11	FSM	ENSG00000071243.16	ENST00000431467.1	1447	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	23.4997872330794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGTAAGTAAATTATT	305	False	NA	NA	False	NA	NA	NA	120951115	120975014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_88206.known	chr7	-	2455	10	FSM	ENSG00000196937.11	ENST00000359943.8	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_6	81.2346091785703	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGGTTTTGCT	21	True	NA	-27	True	AATAAA	-28	NA	121396308	121348877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_121350551_121351142_121351270_121360042_121360128_121362896_121362948_121364129_121364189_121371299_121371424_121372109_121372140_121378909_121379015_121382956_121383011_121396161
transcript_88213.known	chr7	+	8103	30	FSM	ENSG00000106278.12	ENST00000393386.7	8103	30	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_12	102.93120198681	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	0	True	NA	17	True	AATAAA	-19	NA	121873160	122062036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_88216.known	chr7	+	5633	31	FSM	ENSG00000106278.12	ENST00000651065.1	5633	31	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_23	139.954452908398	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAACACCTTACCAAAC	NA	False	NA	-62	True	AATAGA	-31	NA	121873088	122061957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_8822.known	chr1	+	6861	15	FSM	ENSG00000057252.13	ENST00000540564.5	6861	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	55.8907918376981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTCTTTTCTGATTC	NA	False	NA	26	True	ATTAAA	-16	NA	179293713	179358677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_179293937_179302676_179302803_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
transcript_88228.known	chr7	-	5774	24	FSM	ENSG00000008311.16	ENST00000679511.1	5774	24	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_23	1717.62972698338	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	24	True	NA	-1	True	NA	NA	NA	122144239	122073582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
transcript_8823.nnic	chr1	-	1512	7	NNC	ENSG00000169905.13	novel	8319	7	NA	NA	-3	-7629	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	29.448637018073	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAGAAATTAAAGAGAA	-4	True	NA	4	True	NA	NA	NA	179877806	179847604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_179847637_179850844_179851364_179852631_179852812_179856057_179856171_179865435_179865855_179877238_179877374_179877692
transcript_88233.known	chr7	-	5728	23	FSM	ENSG00000008311.16	ENST00000679847.1	5728	23	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	1738.32808734606	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	9	True	NA	-1	True	NA	NA	NA	122144254	122073582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_88246.known	chr7	-	1816	13	FSM	ENSG00000008311.16	ENST00000473553.5	1816	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	1767.28499203031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAGTGCAGTGGCGC	8	True	NA	72	True	NA	NA	NA	122144255	122076148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122101370_122101439_122101620_122101681_122144160
transcript_88249.nic	chr7	-	1944	6	ISM	ENSG00000008311.16	ENST00000681434.1	4963	24	28	42679	-14	-16494	5prime_fragment	FALSE	canonical	3	860	junction_5	32.5674684309358	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCTTTCTAAGTGT	-6	True	NA	NA	False	AGTAAA	-12	NA	122144269	122117173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_88250.nnic	chr7	-	1425	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	-14	-41823	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGCCTGAAGTTTGA	-6	True	NA	-1	True	ATTAAA	-23	NA	122144269	122142502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_122143819_122144160
transcript_88251.nnic	chr7	-	782	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	-14	-42466	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGCACTTTGGTGTTT	-6	True	NA	-16	True	ATTAAA	-16	NA	122144269	122143145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_122143819_122144160
transcript_88252.nnic	chr7	-	156	2	NNC	ENSG00000008311.16	novel	4519	25	NA	NA	-14	-43092	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGGCTTGTTAATTTGTG	-6	True	NA	-1	True	AATAAA	-22	NA	122144269	122143771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_122143819_122144160
transcript_88253.nnic	chr7	+	534	4	NNC	ENSG00000232524.1	novel	451	3	NA	NA	-16137	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTATTAACAAAATATT	NA	False	NA	NA	False	AATAAA	-36	NA	123440491	123459856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_123440571_123456624_123456766_123457398_123457549_123459692
transcript_88254.known	chr7	-	1803	7	FSM	ENSG00000128609.16	ENST00000467117.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	830.574449803668	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCGCCTTCCTAGCTC	13	True	NA	-32	True	AATAAA	-9	NA	123557804	123541044	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_88256.known	chr7	-	778	6	FSM	ENSG00000128609.16	ENST00000466896.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	977.846613738576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCCTACAGATTTTCAA	16	True	NA	NA	False	ATTAAA	-4	NA	123557801	123541857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123557403_123557449_123557774
transcript_88257.known	chr7	-	5268	6	FSM	ENSG00000128609.16	ENST00000676614.1	5268	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	917.998605663429	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTATTATGATCCAAAT	13	True	NA	NA	False	AATAGA	-33	NA	123557804	123537419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_88258.known	chr7	-	5608	5	FSM	ENSG00000128609.16	ENST00000471770.5	5608	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	922.458671160936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	472	False	NA	NA	False	TATAAA	-18	NA	123557780	123536996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557624
transcript_88260.known	chr7	-	5496	5	FSM	ENSG00000128609.16	ENST00000355749.7	5496	5	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_4	332.615017700644	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	-1	True	NA	NA	False	TATAAA	-18	NA	123557818	123536996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_88262.known	chr7	-	1504	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	946.236052297029	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	348	False	NA	-17	True	AATAAA	-24	NA	123557904	123541029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
transcript_88263.known	chr7	-	1432	4	FSM	ENSG00000128609.16	ENST00000618945.4	1432	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	847.410696704313	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	348	False	NA	-17	True	AATAAA	-24	NA	123557904	123541029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123542221_123545610_123545677_123557403_123557449_123557774
transcript_88264.known	chr7	-	2802	2	FSM	ENSG00000128609.16	ENST00000490618.1	2802	2	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGATA	-5	True	NA	NA	False	AAAAAG	-1	NA	123557822	123554694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123557449_123557774
transcript_88265.known	chr7	-	4363	11	FSM	ENSG00000106299.8	ENST00000223023.5	4363	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_7	25.1761792176653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAATGTGTTTCATGT	-23	True	NA	-30	True	AATAAA	-22	NA	123749003	123681942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123684581_123689041_123689151_123692346_123692868_123694714_123694869_123695822_123695866_123696578_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_88267.nic	chr7	-	907	6	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-80	14707	-80	-14707	5prime_fragment	FALSE	canonical	3	233	junction_2	26.0353605698097	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAGAAGGGAAAAGC	-5	True	NA	-13	True	AATAGA	-40	NA	123749083	123696649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_88268.nic	chr7	-	673	4	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-17	24383	-17	-24383	5prime_fragment	FALSE	canonical	3	256	junction_1	20.3688214899363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCGAAAAGCAGTTACAGA	-40	True	NA	NA	False	AATGAA	-16	NA	123749020	123706325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_123706374_123706739_123706827_123709088_123709224_123748617
transcript_88269.known	chr7	-	107	1	FSM	ENSG00000201104.1	ENST00000364234.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	123790711	123790604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_123790600_123790700
transcript_88270.known	chr7	-	5298	2	FSM	ENSG00000170775.3	ENST00000303921.3	5298	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAACAACAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	124765792	124743884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124747344_124763953
transcript_88276.known	chr7	-	2877	19	FSM	ENSG00000128513.16	ENST00000668382.1	2877	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_18	13.9262829938463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTAATAAAAGTGGTCAG	19	True	NA	30	True	NA	NA	NA	124929944	124823548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
transcript_88277.known	chr7	-	3924	19	FSM	ENSG00000128513.16	ENST00000357628.8	3924	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_18	11.3382342344633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	12	True	NA	-4	True	AATAAA	-18	NA	124929825	124822385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_8828.known	chr1	-	8319	7	FSM	ENSG00000169905.13	ENST00000609928.6	8319	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	28.5233822211415	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCAGCGGACTGATT	-1	True	NA	-13	True	AATAAA	-14	NA	179877803	179839975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179865435_179865855_179877238_179877374_179877692
transcript_88289.known	chr7	-	3950	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	15.2204106269831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTGGTTTATTGTG	-20	True	NA	-5	True	AATAAA	-17	NA	124929983	124822386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_88305.known	chr7	+	667	3	FSM	ENSG00000224897.9	ENST00000659682.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGGTTTCCATGAACT	9	False	NA	NA	False	AATAAA	-39	NA	124929882	124992289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_124930017_124940279_124940386_124991862
transcript_8831.known	chr1	-	7905	6	FSM	ENSG00000169905.13	ENST00000367612.7	7905	6	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	30.4276190327143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGACTGATTCTTGATTAA	3	True	NA	-4	True	AATAAA	-23	NA	179877799	179839966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179877238_179877374_179877692
transcript_88313.known	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_4	126.173531297178	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	6	True	NA	27	True	AATAAA	-17	NA	127588410	127591700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
transcript_88315.known	chr7	+	1509	5	FSM	ENSG00000004059.11	ENST00000463733.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_3	125.220555421225	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCTGTGGTTTGTAC	-19	True	NA	8	True	NA	NA	NA	127588385	127591681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_127588566_127589082_127589164_127589484_127590138_127590962_127591089_127591212
transcript_88317.known	chr7	-	4128	2	FSM	ENSG00000179562.3	ENST00000321407.3	4128	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGTTCCTTAATAG	-1	True	NA	-1	True	ATTAAA	-15	NA	127585596	127580627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_127583310_127584150
transcript_88319.known	chr7	+	3448	24	FSM	ENSG00000197157.11	ENST00000354725.8	3448	24	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_16	149.752322299277	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTATTGATCACAGTGT	-3	True	NA	31	True	AATAAA	-20	NA	127652193	128092593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_127652452_127686612_127686763_127694827_127694949_127698874_127698954_127701162_127701324_127702434_127702527_127703164_127703324_127704838_127704946_127707556_127707648_127721286_127721401_127807483_127807574_127844323_127844425_127887901_127888013_127904746_127904820_127929187_127929330_127990946_127991057_128074501_128074691_128081359_128081502_128084723_128084848_128085710_128085781_128086937_128087052_128089488_128089693_128091836_128091882_128091992
transcript_88322.known	chr7	-	15507	19	FSM	ENSG00000106344.8	ENST00000223073.6	15507	19	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_10	26.6468097365482	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGCAGCATGATTTA	-38	True	NA	NA	False	AATAAA	-18	NA	128343908	128297684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_88326.nic	chr7	-	2968	18	NIC	ENSG00000106344.8	novel	15507	19	NA	NA	-6	0	intron_retention	FALSE	canonical	3	169	junction_10	25.9954747193113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATTTCTAATATGTGTG	-44	True	NA	62	True	NA	NA	NA	128343914	128310396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_8833.nnic	chr1	-	1915	4	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-3	2624	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.9444085093999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGAAGACTAGTTAGT	-4	True	NA	-13	True	AATAAA	-18	NA	179877806	179862440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_179863113_179864860_179865855_179877238_179877374_179877692
transcript_88333.nic	chr7	-	1349	5	ISM	ENSG00000106344.8	ENST00000223073.6	15507	19	-6	39878	-6	717	5prime_fragment	FALSE	canonical	3	203	junction_4	12.7549010188241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTATTGCCGTAGAGAT	-44	True	NA	NA	False	NA	NA	NA	128343914	128337562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_88336.known	chr7	-	1888	14	FSM	ENSG00000106348.18	ENST00000470772.5	1888	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	65.7756632032128	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTCTTGCTGCAGCCT	9	True	NA	NA	False	NA	NA	NA	128405942	128392738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400537_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_88344.known	chr7	+	5841	9	FSM	ENSG00000165055.16	ENST00000262432.13	5841	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	99.0680794958699	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	0	True	NA	5	True	AATAAA	-18	NA	128476747	128506602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_8835.known	chr1	-	7067	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	16.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACTGTCATACATTTG	3	True	NA	-11	True	AATAAA	-37	NA	179877799	179859029	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179865855_179877238_179877374_179877692
transcript_88358.nic	chr7	+	976	6	NIC	ENSG00000165055.16	novel	977	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	116.171252898469	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACCTGCCATTCCAT	NA	False	NA	7	True	AATAAA	-20	NA	128476733	128488597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128488322
transcript_8836.known	chr1	-	888	2	FSM	ENSG00000169905.13	ENST00000495650.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTAGACCGTATTAAC	5221	False	NA	NA	False	AATGAA	-11	NA	179877790	179865064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179865855_179877692
transcript_88360.known	chr7	+	1364	2	FSM	ENSG00000135245.10	ENST00000257696.5	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	12	True	NA	46	True	AATAAA	-19	NA	128455877	128458418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128456024_128457200
transcript_88362.known	chr7	+	785	2	FSM	ENSG00000135245.10	ENST00000435296.2	785	2	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGCCTGTTTAATGCA	-17	True	NA	NA	False	AAAAAG	-5	NA	128455848	128457924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128455910_128457200
transcript_88364.known	chr7	+	904	2	FSM	ENSG00000135245.10	ENST00000466473.1	904	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTGTGTCATGTTGAC	413	False	NA	43	True	AATAAA	-16	NA	128456358	128458415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128456701_128457853
transcript_88365.known	chr7	+	1590	8	FSM	ENSG00000165055.16	ENST00000482555.5	1590	8	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	105.146739058774	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGTTGATGCTGG	NA	False	NA	0	True	AATAAA	-12	NA	128476728	128502126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_88366.known	chr7	+	1370	2	FSM	ENSG00000135245.10	ENST00000481454.1	1370	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	3	True	NA	46	True	AATAAA	-19	NA	128455902	128458418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128456701_128457846
transcript_88367.known	chr7	-	448	1	FSM	ENSG00000213280.2	ENST00000393266.2	448	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGAGGATTCTTTTG	26	False	NA	NA	False	NA	NA	NA	128570688	128570240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128570200_128570700
transcript_8837.nic	chr1	-	499	2	ISM	ENSG00000169905.13	ENST00000483123.1	2687	3	-34	3283	-3	-3283	5prime_fragment	FALSE	canonical	3	103	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGTGCTAAAAAGGGCAAA	-4	True	NA	NA	False	NA	NA	NA	179877806	179876988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_179877374_179877692
transcript_88376.nic	chr7	+	429	2	ISM	ENSG00000135248.16	ENST00000493738.5	873	5	-35	9228	-6	-4884	5prime_fragment	FALSE	canonical	3	27	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCCTTTGTGTGTAA	-9	True	NA	12	True	AATACA	-15	NA	128709054	128714198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_128709208_128713922
transcript_88377.known	chr7	+	1574	8	FSM	ENSG00000135248.16	ENST00000485070.5	1574	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	8.64728340024089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAATGTTTTCT	-3	True	NA	NA	False	AGTAAA	-10	NA	128709060	128731611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128709208_128713922_128714133_128716812_128716998_128718891_128719084_128723196_128723319_128726833_128726872_128729901_128730070_128731099
transcript_8838.known	chr1	+	3397	10	FSM	ENSG00000143337.19	ENST00000435319.8	3397	10	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	23.3428552000155	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTTATAAACTTAATGA	-4	True	NA	13	True	AATAAA	-26	NA	179882695	179920077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997_179914055_179917451
transcript_88382.known	chr7	+	2572	8	FSM	ENSG00000128595.17	ENST00000479257.5	2572	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	961.909856186416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAGGAAAAATACA	1	True	NA	NA	False	NA	NA	NA	128739403	128769936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_88384.known	chr7	+	4225	8	FSM	ENSG00000128595.17	ENST00000542996.6	4225	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1040.30335057833	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	NA	False	NA	17	True	AATAAA	-18	NA	128739291	128771477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_88389.known	chr7	+	5266	7	FSM	ENSG00000128595.17	ENST00000249364.9	5266	7	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_2	292.981607310463	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTTTGGAGCAACT	-6	True	NA	21	True	AATAAA	-14	NA	128739358	128773400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_88391.known	chr7	+	2438	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_3	870.227556447163	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	-2	True	NA	NA	False	NA	NA	NA	128739362	128770576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_88395.known	chr7	+	3210	6	FSM	ENSG00000128595.17	ENST00000535011.6	3210	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	822.243905419797	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	NA	False	NA	17	True	AATAAA	-18	NA	128739291	128771477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128769062
transcript_88401.known	chr7	+	711	3	FSM	ENSG00000128524.5	ENST00000492758.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGGGTTGGGTGCTGG	34	False	NA	28	True	ATTAAA	-20	NA	128862903	128865844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128863063_128865119_128865204_128865376
transcript_88404.known	chr7	+	678	2	FSM	ENSG00000128524.5	ENST00000249289.5	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1767	junction_1	0	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTGGGTGCTGGAAA	-14	True	NA	31	True	ATTAAA	-23	NA	128862855	128865847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_128863063_128865376
transcript_88408.known	chr7	-	3585	24	FSM	ENSG00000064419.14	ENST00000482320.5	3585	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	8.07010867735201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	70	False	NA	NA	False	AGTAAA	-17	NA	129055093	128955087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129041556_129041718_129054650
transcript_88409.known	chr7	-	4345	23	FSM	ENSG00000064419.14	ENST00000265388.10	4345	23	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_20	4.49149793710386	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCTTTGTTTTTA	10	True	NA	-6	True	AATAAA	-15	NA	129055111	128954184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_88417.known	chr7	+	2951	8	FSM	ENSG00000158457.6	ENST00000486685.3	2951	8	0	0	0	0	multi-exon	TRUE	canonical	3	410	junction_7	16.4788051875178	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCCTTTTATTCTGG	-21	True	NA	NA	False	AATAAA	-25	NA	129144706	129169699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_129145083_129161678_129161737_129162393_129162522_129162832_129162908_129164473_129164570_129166777_129166907_129167398_129167561_129167772
transcript_88419.known	chr7	+	2866	20	FSM	ENSG00000128578.10	ENST00000435494.2	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	6.03728030346479	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGAGTTGTCCCAAAAT	0	True	NA	3	True	AATAAA	-15	NA	129434445	129483631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841
transcript_88420.known	chr7	+	3518	11	FSM	ENSG00000106459.15	ENST00000393232.6	3518	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	18.4325798519903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTGGAATTGTTCAT	-6	True	NA	9	True	AATAAA	-19	NA	129611719	129757076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_129611825_129657345_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_88422.known	chr7	+	2424	11	FSM	ENSG00000106459.15	ENST00000223190.8	2424	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	13.2230858728211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAATTGCTCGTATAT	30	True	NA	16	True	ATTAAA	-24	NA	129611755	129756015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_88424.nic	chr7	-	2738	7	NIC	ENSG00000186591.13	novel	5162	7	NA	NA	-45	-2049	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	203.656573672445	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTATAAACAATAGTGT	1552	False	NA	-27	True	AATAAA	-18	NA	129951372	129832792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129951277
transcript_88425.known	chr7	-	5162	7	FSM	ENSG00000186591.13	ENST00000355621.8	5162	7	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	28.3063597094363	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGACCTTGATCAATA	-36	True	NA	-3	True	AATAAA	-21	NA	129952960	129830731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_88426.known	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_4	306.463700950047	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-11	True	NA	-47	True	NA	NA	NA	130051389	130018325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_88429.known	chr7	-	1889	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	0	0	0	multi-exon	FALSE	canonical	1	253	junction_8	199.077874210069	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	4	True	NA	-13	True	AATAAA	-14	NA	130051374	130018291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_8843.known	chr1	-	989	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATCCATTATTTTTA	416	False	NA	NA	False	ATTAAA	-20	NA	179882595	179881606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_179881600_179882600
transcript_88432.nic	chr7	-	1830	9	NIC	ENSG00000091732.17	novel	1889	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	284.584675448275	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	NA	False	NA	-13	True	AATAAA	-14	NA	130051407	130018291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130048973_130049145_130051220
transcript_88434.nic	chr7	-	1642	8	NIC	ENSG00000091732.17	novel	1889	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	286.934537083685	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-12	True	NA	-13	True	AATAAA	-14	NA	130051390	130018291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130051220
transcript_88435.known	chr7	-	3455	15	FSM	ENSG00000146842.17	ENST00000397622.7	3455	15	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_14	37.3111571648427	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	12	True	NA	-7	True	ATTAAA	-31	NA	130205406	130164712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130178401_130178528_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_8844.known	chr1	+	2519	13	FSM	ENSG00000116260.17	ENST00000367600.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	202.566175744016	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGTTCTTTAAC	20	False	NA	30	True	AATAAA	-19	NA	180154896	180198034	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196600_180197332
transcript_88442.known	chr7	-	1700	11	FSM	ENSG00000106477.20	ENST00000675803.1	1700	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	24.2940321889965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTGTTTTGTTTTT	1	True	NA	NA	False	AAAAAG	-14	NA	130440848	130398594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440533
transcript_88443.known	chr7	-	6292	11	FSM	ENSG00000106477.20	ENST00000223208.10	6292	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	11.034491379307	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGATCTTTTCTT	6	True	NA	NA	False	AGTAAA	-15	NA	130441016	130393770	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_88444.known	chr7	-	2465	11	FSM	ENSG00000106477.20	ENST00000674630.1	2465	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	24.6746833819605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTTCTCGCCACCAA	-24	True	NA	-147	True	NA	NA	NA	130441046	130397551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404639_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_88446.known	chr7	-	2589	10	FSM	ENSG00000106477.20	ENST00000675596.1	2589	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.0631033085738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGTATGAGAAATAA	NA	False	NA	-74	True	NA	NA	NA	130441237	130397478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_8845.known	chr1	+	9276	12	FSM	ENSG00000116260.17	ENST00000367602.8	9276	12	0	0	0	0	multi-exon	TRUE	canonical	3	561	junction_6	77.077721856653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGATGCAATTTTTTTT	-8	True	NA	NA	False	AATAAA	-43	NA	180154868	180204030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261
transcript_88450.known	chr7	-	3161	3	FSM	ENSG00000106477.20	ENST00000489512.5	3161	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	46.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGAAGTGTAGACA	85	False	130441077	NA	False	AATAAA	-39	NA	130441056	130419033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130422008_130427954_130428019_130440933
transcript_88451.known	chr7	-	2541	11	FSM	ENSG00000106477.20	ENST00000676243.1	2541	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	25.4432702300628	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTAAGATTTGCCTTAAC	82	False	130441077	NA	False	NA	NA	NA	130441059	130397573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_88452.known	chr7	-	1272	11	FSM	ENSG00000106477.20	ENST00000675935.1	1272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	25.759658382828	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-1	True	NA	-9	True	AATAAA	-21	NA	130441078	130398843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402791_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_88453.known	chr7	-	1012	10	FSM	ENSG00000106477.20	ENST00000343969.10	1012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.406406388126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	6	True	NA	-9	True	AATAAA	-21	NA	130441016	130398843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130399040_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_88454.known	chr7	-	3134	24	FSM	ENSG00000158623.14	ENST00000425248.5	3134	24	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_13	20.9637368059601	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	-14	True	NA	-13	True	AATAAA	-20	NA	130668748	130506237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130506807_130507273_130507373_130507684_130507824_130508561_130508660_130547673_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_88461.nnic	chr7	-	864	6	NNC	ENSG00000213265.9	novel	1633	8	NA	NA	17797	26397	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	70.474392512458	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTAGTTAGTGTCTTA	-14	True	NA	NA	False	TATAAA	-24	NA	130668748	130642245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_130642707_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_88463.known	chr7	-	3073	20	FSM	ENSG00000158623.14	ENST00000330992.8	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	22.0378671841832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCCCTGGTCATCAT	29	False	NA	NA	False	AATAAA	-20	NA	130668705	130546786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_88464.known	chr7	+	2443	12	FSM	ENSG00000106484.16	ENST00000341441.9	2443	12	0	0	0	0	multi-exon	TRUE	canonical	3	1434	junction_1	187.312131776732	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486170	130506292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_88468.nic	chr7	+	2407	12	NIC	ENSG00000106484.16	novel	2443	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_1	494.386722520901	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	-12	True	NA	16	True	AATAAA	-18	NA	130486330	130506292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_8847.known	chr1	-	1293	8	FSM	ENSG00000230124.8	ENST00000367595.4	1293	8	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_4	61.9693801940333	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTCTCAGCAATTC	5	True	NA	-20	True	AATAAA	-22	NA	180502577	180288229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_180288518_180314691_180314723_180397515_180397606_180413365_180413472_180430179_180430263_180492268_180492366_180495460_180495526_180502044
transcript_88471.known	chr7	+	2337	11	FSM	ENSG00000106484.16	ENST00000416162.7	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_8	521.849748490885	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486174	130506292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_88473.known	chr7	+	2473	11	FSM	ENSG00000106484.16	ENST00000427521.6	2473	11	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	682.74754485095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	-7	True	NA	NA	False	NA	NA	NA	130486335	130506465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_88477.known	chr7	+	2448	18	FSM	ENSG00000128585.18	ENST00000458153.5	2448	18	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_5	89.5499319453605	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	13	True	NA	13	True	AATAAA	-25	NA	131327896	131487962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487606
transcript_88478.nnic	chr7	+	2426	18	NNC	ENSG00000128585.18	novel	11136	18	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_17	88.8654361602116	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATATATTTT	411	False	NA	16	True	AATAAA	-28	NA	131327842	131487965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487682
transcript_88481.known	chr7	+	2386	17	FSM	ENSG00000128585.18	ENST00000494785.5	2386	17	0	0	0	0	multi-exon	FALSE	canonical	2	219	junction_9	45.5435488708335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAATGCAGGCTGTTTT	-1	True	NA	NA	False	AATAAA	-20	NA	131327882	131478960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622
transcript_88487.nic	chr7	+	3190	8	ISM	ENSG00000128585.18	ENST00000494785.5	2386	17	-40	61964	-3	2293	5prime_fragment	FALSE	canonical	3	346	junction_3	26.5214583894257	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACTCAAAGAGGAAA	411	False	NA	NA	False	NA	NA	NA	131327842	131416996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644
transcript_88488.nic	chr7	+	1088	2	ISM	ENSG00000128585.18	ENST00000494785.5	2386	17	-40	102604	-3	-22941	5prime_fragment	FALSE	canonical	3	405	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGCTGGGCGCGGTGG	411	False	NA	NA	False	NA	NA	NA	131327842	131376356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_131327998_131375423
transcript_88489.known	chr7	+	406	1	FSM	ENSG00000233287.1	ENST00000427253.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGATGCTTCGTTTTG	33	False	NA	NA	False	NA	NA	NA	131242589	131242995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_131242600_131243000
transcript_88490.known	chr7	-	1900	7	FSM	ENSG00000236753.7	ENST00000670684.1	1900	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	9.95685135416256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCTGTCTCTACT	-10	True	NA	NA	False	NA	NA	NA	131327763	131309926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131310774_131311129_131311224_131321878_131321932_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_88493.known	chr7	-	2043	6	FSM	ENSG00000236753.7	ENST00000429067.5	2043	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	9.93981891183134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	131327776	131309743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131310774_131311129_131311224_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_88494.known	chr7	-	1497	4	FSM	ENSG00000236753.7	ENST00000444245.6	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCGTCTCTACTAAAA	7	True	NA	NA	False	NA	NA	NA	131327746	131322767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131323869_131324251_131324426_131326805_131326896_131327614
transcript_88495.known	chr7	-	1510	4	FSM	ENSG00000236753.7	ENST00000454515.6	1510	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	6.54896090146283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCGTCTCTACTAAAAAT	36	True	NA	NA	False	NA	NA	NA	131327717	131322765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131323869_131324251_131324426_131326805_131326936_131327614
transcript_88496.known	chr7	-	1349	4	FSM	ENSG00000236753.7	ENST00000416220.6	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	8.16496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	29	True	NA	NA	False	TTTAAA	-41	NA	131327724	131322842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_131323869_131324302_131324426_131326805_131326896_131327614
transcript_88497.nic	chr7	-	1930	4	ISM	ENSG00000236753.7	ENST00000670684.1	1900	7	-61	12475	-45	243	5prime_fragment	FALSE	canonical	3	18	junction_2	4.18993502999218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTCTCAGGTAGTTCTT	79	False	NA	NA	False	ATTAAA	-21	NA	131327824	131322401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_131323869_131324302_131324426_131326805_131326936_131327614
transcript_88500.nic	chr7	-	1766	4	ISM	ENSG00000236753.7	ENST00000670684.1	1900	7	-61	12639	-45	79	5prime_fragment	FALSE	canonical	3	18	junction_2	4.18993502999218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTTTGGCAGT	79	False	NA	NA	False	NA	NA	NA	131327824	131322565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_131323869_131324302_131324426_131326805_131326936_131327614
transcript_88503.known	chr7	-	1038	9	FSM	ENSG00000106554.13	ENST00000448878.6	1038	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	524.628380379865	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAAAGAGAAGGGCA	53	False	NA	NA	False	ATTAAA	-34	NA	133082032	132785392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132886973_132886989_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_88508.known	chr7	-	1604	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	1144	junction_6	49.9371032971906	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCATTGTAGCTCCTC	-5	True	NA	-20	True	AATAAA	-17	NA	133082090	132784869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_88516.known	chr7	+	4182	18	FSM	ENSG00000131558.15	ENST00000253861.5	4182	18	0	0	0	0	multi-exon	TRUE	canonical	3	316	junction_10	29.4056464224559	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGTTATTTTTCTT	-7	True	NA	20	True	ATTAAA	-22	NA	133253077	134065761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049_133480139_133630044_133630142_133817324_133817545_133895598_133895736_133917582_133917739_133937890_133938070_133997491_133997634_134004911_134005091_134007675_134007836_134064290
transcript_88517.known	chr7	+	2364	9	FSM	ENSG00000131558.15	ENST00000462055.5	2364	9	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_7	32.7220777916073	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTGGTGAGGGCCTGC	10	True	NA	NA	False	AAAAAG	-22	NA	133253094	133481078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049
transcript_88519.nic	chr7	+	674	4	ISM	ENSG00000131558.15	ENST00000462055.5	2364	9	-22	175028	0	139	5prime_fragment	FALSE	canonical	3	354	junction_3	33.6551135292494	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAATCAGGTTAAAGAG	-12	True	NA	NA	False	NA	NA	NA	133253072	133306050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876
transcript_8852.known	chr1	+	5844	6	FSM	ENSG00000121454.6	ENST00000263726.4	5844	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.06939798987516	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATGTGTCTTGCTTTT	-11	True	NA	10	True	AATAAA	-18	NA	180230263	180278984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180230606_180248284_180248457_180266391_180266595_180271379_180271535_180271834_180272007_180274184
transcript_88520.known	chr7	+	568	2	FSM	ENSG00000131558.15	ENST00000481074.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAACTCGTTTATTT	14	True	NA	25	True	AATAAA	-37	NA	133253098	133254018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_133253188_133253539
transcript_88522.known	chr7	-	6676	10	FSM	ENSG00000205060.11	ENST00000378509.9	6676	10	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	27.7306266485449	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTTTTGCCATTATT	29	True	NA	0	True	AATAAA	-19	NA	134316930	134289331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_88526.known	chr7	-	1379	9	FSM	ENSG00000205060.11	ENST00000416907.5	1379	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	108.382424774499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAATTCTGAGTCTC	-26	True	NA	39	True	NA	NA	NA	134316903	134294551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134306671_134306775_134309365_134309480_134316674
transcript_88527.known	chr7	-	1033	8	FSM	ENSG00000205060.11	ENST00000470969.2	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	29.8226047672238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCATTTTGCTTTGGA	-20	True	NA	NA	False	AGTAAA	-14	NA	134316897	134299308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_88528.known	chr7	-	1665	6	FSM	ENSG00000273297.3	ENST00000656533.1	1665	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTTTTTCTTGTC	NA	False	NA	NA	False	ATTAAA	-35	NA	134432463	134368736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134369545_134370714_134370919_134371344_134371521_134373061_134373141_134417971_134418220_134432313
transcript_88536.known	chr7	-	1361	10	FSM	ENSG00000085662.14	ENST00000285930.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_6	137.646084014201	2654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTGTGAGCTTTG	30	True	NA	-32	True	AATAAA	-15	NA	134459100	134442355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447979_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_88546.known	chr7	-	1930	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_5	145.953759800836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGCCTCAAATAAAAAG	28	True	NA	-63	True	NA	NA	NA	134459102	134442386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_88554.known	chr7	+	2051	4	FSM	ENSG00000172331.12	ENST00000393132.2	2051	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	101.588494536646	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTGTTTG	11	True	NA	26	True	AATAAA	-37	NA	134646830	134679813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134646938_134658347_134658669_134661446_134662109_134678852
transcript_88556.known	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	13.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	-2	True	NA	29	True	AATAAA	-40	NA	134646852	134679816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134646938_134661446_134662109_134678852
transcript_88559.known	chr7	+	2665	15	FSM	ENSG00000122786.20	ENST00000422748.5	2665	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	282.198701525817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	0	True	NA	85	True	NA	NA	NA	134779419	134968859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958211_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_8856.known	chr1	+	8484	15	FSM	ENSG00000143324.14	ENST00000367590.9	8484	15	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	20.3309355115673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTGACTGTTTTT	-2	True	NA	60	True	NA	NA	NA	180632021	180890279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180836521_180836717_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_88561.known	chr7	+	5011	15	FSM	ENSG00000122786.20	ENST00000361675.7	5011	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	268.260648456318	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTGAGTCTTGGTT	-11	True	NA	13	True	AATAAA	-25	NA	134779633	134970729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134934078_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_88562.known	chr7	+	4114	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	173.474074252811	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	9	False	NA	41	True	AATAAA	-21	NA	134779677	134970641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_88567.known	chr7	+	2124	12	FSM	ENSG00000122786.20	ENST00000424922.5	2124	12	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_1	107.809826443075	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	15	True	NA	85	True	NA	NA	NA	134891609	134968859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_88578.nic	chr7	+	1456	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-152	28545	78	602	5prime_fragment	FALSE	canonical	3	299	junction_3	183.13519596189	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAGGAAGAGAAAAGG	78	False	NA	NA	False	GATAAA	-39	NA	134779497	134933844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_8858.known	chr1	+	4126	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	43.6764597477254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	8	True	NA	7	True	AATAAA	-19	NA	180632031	180886126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_88582.nic	chr7	+	702	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-236	35617	-26	0	5prime_fragment	FALSE	canonical	3	422	junction_1	171	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	37	True	AAAAAG	-16	NA	134891373	134933242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_88583.nic	chr7	+	777	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-236	35542	-26	75	5prime_fragment	FALSE	canonical	3	422	junction_1	171	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAAGAAGACAAGGAAA	NA	False	NA	-2	True	AAGAAA	-2	NA	134891373	134933317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_88586.nic	chr7	+	889	5	NIC	ENSG00000146856.14	novel	856	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	14.2719129761921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	-21	True	NA	-34	True	NA	NA	NA	134986507	134995550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_134986702_134987888_134987997_134989249_134989311_134993492_134993679_134995210
transcript_88587.known	chr7	+	2979	5	FSM	ENSG00000146856.14	ENST00000476700.5	2979	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	16.2845785944863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTTTGGCCCTGTG	19	True	NA	24	True	AATAAA	-14	NA	134986547	135012511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134986702_134987888_134987997_134989249_134989311_134993492_134993679_135010041
transcript_88592.nic	chr7	+	740	3	ISM	ENSG00000146856.14	ENST00000476700.5	2979	5	-40	22824	0	1323	5prime_fragment	FALSE	canonical	3	38	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGGACATCTTGA	-21	True	NA	10	True	AATAAA	-21	NA	134986507	134989687	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_134986702_134987888_134987997_134989249
transcript_88593.known	chr7	+	856	5	FSM	ENSG00000146856.14	ENST00000494702.2	856	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.0779082253011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	26	True	NA	-34	True	NA	NA	NA	134986554	134995550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_134986702_134987874_134987997_134989249_134989311_134993492_134993679_134995210
transcript_88598.known	chr7	-	1738	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	114.77223822278	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	45	True	NA	-3	True	AATACA	-34	NA	135170661	135165784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
transcript_88599.nic	chr7	-	1624	4	NIC	ENSG00000122783.17	novel	1494	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	118.923878547956	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	1669	False	NA	-3	True	AATACA	-34	NA	135170800	135165784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_135166872_135167731_135167808_135168748_135169061_135170651
transcript_88601.known	chr7	-	1494	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	77.761744379154	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-1	True	NA	-3	True	AATACA	-34	NA	135170707	135165784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
transcript_88605.known	chr7	-	596	4	FSM	ENSG00000122783.17	ENST00000483029.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	86.9687044606021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCAGAAGCCCCTGGA	31	True	NA	NA	False	NA	NA	NA	135170675	135166467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168968_135169061_135170651
transcript_88606.nnic	chr7	-	1548	3	NIC	ENSG00000122783.17	novel	1494	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	103.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	1669	False	NA	-3	True	AATACA	-34	NA	135170800	135165784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_135166872_135168748_135169061_135170651
transcript_88608.known	chr7	-	844	2	FSM	ENSG00000122783.17	ENST00000487774.1	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGGGGGGGTGGTGAGT	-32	True	NA	NA	False	NA	NA	NA	135170738	135168303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135169061_135170651
transcript_88609.known	chr7	-	1579	4	FSM	ENSG00000122783.17	ENST00000430372.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118.923878547956	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAATACACAAGTGCTA	1674	False	NA	-47	True	AATAAA	-17	NA	135170795	135165828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135166872_135167731_135167808_135168744_135169061_135170651
transcript_88611.known	chr7	-	4580	15	FSM	ENSG00000105875.15	ENST00000354475.5	4580	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	7.94496374941962	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTATCTCTCCTTCCATA	-9	True	NA	-16	True	AATAAA	-16	NA	135211526	135183838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_88613.known	chr7	-	3563	12	FSM	ENSG00000080802.20	ENST00000541284.6	3538	12	-25	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	44.845925397893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	NA	False	NA	0	True	AATAAA	-22	NA	135510127	135361794	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_88614.known	chr7	-	2215	11	FSM	ENSG00000080802.20	ENST00000361528.8	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	30.8708600463285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAGGAGCAACCATTA	2	True	NA	NA	False	NA	NA	NA	135510091	135362884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_88615.known	chr7	-	3783	11	FSM	ENSG00000080802.20	ENST00000315544.6	3783	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	42.3581161054172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGTGGAGCTGAGGC	NA	False	NA	89	True	NA	NA	NA	135510127	135387069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_88621.known	chr7	+	6264	43	FSM	ENSG00000155561.15	ENST00000285968.11	6264	43	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	90.7151637252847	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTATGGTTAATCTTT	-6	True	NA	NA	False	AATAAA	-21	NA	135557916	135648753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795_135578025_135578750_135578916_135584831_135585008_135587574_135587692_135587854_135587993_135591449_135591601_135592986_135593193_135594546_135594730_135597367_135597419_135597997_135598208_135600869_135600970_135601369_135601508_135602804_135602995_135604339_135604461_135606144_135606227_135606750_135606916_135607246_135607372_135614158_135614274_135615915_135616066_135616654_135616727_135617089_135617248_135617601_135617683_135618411_135618604_135619422_135619691_135619789_135619889_135622776_135622926_135625163_135625356_135626239_135626362_135627972_135628112_135630343_135630471_135635580_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
transcript_88622.nic	chr7	+	2630	18	ISM	ENSG00000155561.15	ENST00000285968.11	6264	43	-26	45885	-26	1418	5prime_fragment	FALSE	canonical	3	434	junction_7	44.2773579729611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATCTTTTTATGGACC	NA	False	NA	NA	False	NA	NA	NA	135557890	135602868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795_135578025_135578750_135578916_135584831_135585008_135587574_135587692_135587854_135587993_135591449_135591601_135592986_135593193_135594546_135594730_135597367_135597419_135597997_135598208_135600869_135600970_135601369_135601508_135602804
transcript_88624.nic	chr7	+	903	5	ISM	ENSG00000155561.15	ENST00000285968.11	6264	43	11	71387	-4	3589	5prime_fragment	FALSE	canonical	3	458	junction_1	46.4670582240796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCACCTCAAACGTTTA	5	True	NA	NA	False	AATAAA	-15	NA	135557927	135577366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968
transcript_88627.known	chr7	+	2461	3	FSM	ENSG00000243317.8	ENST00000507606.3	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_1	47.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGCTTTTTGGCTAGT	6	True	NA	29	True	AATAAA	-20	NA	135662513	135676416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_135662595_135672752_135672807_135674090
transcript_88631.known	chr7	+	2004	3	FSM	ENSG00000243317.8	ENST00000422968.2	2004	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGGAAAGAAGTGTTAAC	56	False	NA	NA	False	AATACA	-21	NA	135662563	135693418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_135662595_135688903_135689029_135691570
transcript_88632.known	chr7	-	2906	16	FSM	ENSG00000164707.16	ENST00000682651.1	2906	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.41844761962894	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTATCTAGTCTTTGTAA	0	True	NA	NA	False	AATAAA	-39	NA	135728186	135681230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135681701_135684123_135684262_135685521_135685684_135691200_135691326_135691547_135691646_135692322_135692425_135694136_135694239_135695367_135695488_135699363_135699549_135701679_135701761_135702844_135702885_135705595_135705651_135706127_135706301_135708113_135708251_135721394_135721524_135727397
transcript_88633.known	chr7	-	3782	4	FSM	ENSG00000105887.11	ENST00000393085.4	3782	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	7.48331477354788	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGTGTCAGCAGCATT	-22	True	NA	-14	True	AATAAA	-17	NA	135977359	135926759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_135930013_135950598_135950683_135951516_135951631_135977028
transcript_88638.known	chr7	-	1482	5	FSM	ENSG00000105894.12	ENST00000348225.7	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	28.0980426364542	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	-19	True	NA	NA	False	AATAAA	-24	NA	137343733	137227340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_137228076_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_8864.known	chr1	-	4810	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	27.2958096507467	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTTGAAAAGGACTGA	25	True	NA	-35	True	AATAAA	-16	NA	181022870	180972724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
transcript_88640.known	chr7	-	2360	10	FSM	ENSG00000182158.16	ENST00000456390.5	2360	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	17.0619785227596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-7	True	NA	NA	False	NA	NA	NA	138002067	137884266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_88641.known	chr7	-	1105	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTTTCCCATATATG	13	True	NA	0	True	AATAAA	-35	NA	138002047	137912810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
transcript_88642.known	chr7	+	3799	19	FSM	ENSG00000122779.18	ENST00000415680.6	3799	19	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_9	170.922515113836	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGATTTTTGTTTT	2	True	NA	NA	False	ATTAAA	-17	NA	138460434	138585585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554865_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_88643.known	chr7	+	8488	19	FSM	ENSG00000122779.18	ENST00000343526.9	8488	19	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_9	125.460288341042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGTATGGAATAAAGG	6	True	NA	10	True	AATAAA	-21	NA	138460258	138589996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_88648.nnic	chr7	-	1446	12	NNC	ENSG00000157703.16	novel	1804	15	NA	NA	-601	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4.39571541954058	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATATTCTCCCATGA	-3	True	NA	-6	True	AATAAA	-19	NA	138664825	138594284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138663073_138663146_138664785
transcript_88649.known	chr7	-	665	4	FSM	ENSG00000157703.16	ENST00000478865.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGATATTCTCCCAT	6722	False	NA	-8	True	AATAAA	-17	NA	138626094	138594286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968
transcript_88650.known	chr7	+	1153	3	FSM	ENSG00000214128.11	ENST00000397602.7	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGGCGGCAGAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	138797951	138803748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_138798187_138801329_138801399_138802899
transcript_88651.nnic	chr7	+	432	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	65	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTGTTGCTTCTACT	381	False	NA	11	True	AATAAA	-13	NA	139035846	139036945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chr7_+_139035986_139036652
transcript_88653.known	chr7	-	7177	13	FSM	ENSG00000105939.14	ENST00000242351.10	7177	13	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_9	23.6541927220807	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGCCTTTATTTGAT	-3	True	NA	-4	True	AATAAA	-19	NA	139109720	139043514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_88654.known	chr7	+	2756	18	FSM	ENSG00000105948.13	ENST00000476296.1	2756	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	18.9329540063046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTACAGTGGTGCGATC	16	True	NA	NA	False	NA	NA	NA	139133787	139190292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139146983_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88656.known	chr7	+	4299	18	FSM	ENSG00000105948.13	ENST00000464848.5	4299	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	11.2612880700451	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATATTCTGTTGAGTG	6	True	NA	19	True	ATTAAA	-20	NA	139133777	139191986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88657.nic	chr7	+	1837	16	NIC	ENSG00000105948.13	novel	4299	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	17.4936178838646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGCATCATTGTATCAT	NA	False	NA	4	True	NA	NA	NA	139133735	139189800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88659.known	chr7	+	1599	15	FSM	ENSG00000105948.13	ENST00000495038.5	1599	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	21.0054657610046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTTCTTCCAAAAATG	-8	True	NA	NA	False	NA	NA	NA	139133763	139189665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88660.nic	chr7	+	2133	10	ISM	ENSG00000105948.13	ENST00000481482.5	1267	11	-44	626	-8	-626	5prime_fragment	FALSE	canonical	3	49	junction_7	11.9350091933121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGGAAAAGAAAAATAATAT	NA	False	NA	NA	False	NA	NA	NA	139133735	139167955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839
transcript_88662.nic	chr7	+	1781	7	ISM	ENSG00000105948.13	ENST00000474035.6	1193	8	-42	12024	-8	1071	5prime_fragment	FALSE	canonical	3	67	junction_5	7.43303437365925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCCTGGCATATCTGTT	NA	False	NA	NA	False	NA	NA	NA	139133735	139149319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205
transcript_88663.known	chr7	+	1794	16	FSM	ENSG00000105948.13	ENST00000478836.6	1794	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	23.7340823851833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATCATTGTATCATTT	6	True	NA	6	True	NA	NA	NA	139133777	139189802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139160947_139161023_139165131_139165235_139166842_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_88668.known	chr7	+	2661	10	FSM	ENSG00000146963.18	ENST00000354926.9	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_8	57.9501701656019	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGAGACTTAAGTTTC	-34	True	NA	29	True	AATAAA	-19	NA	139359893	139423454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_8867.known	chr1	+	363	2	FSM	ENSG00000135835.12	ENST00000496210.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTTTATGGTGAATAC	255	False	NA	18	True	AATAAA	-27	NA	180913153	180914056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_180913294_180913833
transcript_88672.known	chr7	+	460	2	FSM	ENSG00000164898.13	ENST00000481123.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGTTTTTCTCTGTAA	5	True	NA	12	True	ATTAAA	-12	NA	139340449	139345790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139340620_139345500
transcript_88673.known	chr7	+	1014	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCCTTGTCCCCA	-11	True	NA	NA	False	AATAAA	-20	NA	139341336	139346328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139341523_139345500
transcript_88674.known	chr7	+	1923	13	FSM	ENSG00000059377.18	ENST00000448866.7	1923	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	1.2801909579781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTTTGAACCAGTGCTC	6	True	NA	NA	False	AATAAA	-32	NA	139829263	140020293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139829480_139872234_139872329_139875584_139875638_139911224_139911322_139936190_139936308_139953367_139953457_139955458_139955608_139957633_139957765_139961918_139962234_140007090_140007183_140015722_140015861_140017670_140017834_140020024
transcript_88678.known	chr7	+	582	3	FSM	ENSG00000059377.18	ENST00000474763.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCATTGCAAAGTCT	-9	True	NA	NA	False	ATTAAA	-17	NA	139778253	139797484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139778472_139787337_139787427_139797209
transcript_88679.known	chr7	+	459	3	FSM	ENSG00000059377.18	ENST00000462053.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCATTGCAAAGTCT	1116	False	NA	NA	False	ATTAAA	-17	NA	139777146	139797484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_139777242_139787337_139787427_139797209
transcript_8868.known	chr1	-	4065	7	FSM	ENSG00000135821.19	ENST00000417584.6	4065	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	792.270033230814	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGATTTTGTTCA	-20	True	NA	0	True	ACTAAA	-20	NA	182391404	182381704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391174
transcript_88683.known	chr7	-	3330	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_7	62.5592372337236	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-31	True	NA	NA	False	AATAAA	-18	NA	140398530	140333751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88684.nic	chr7	-	3858	15	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	110.931400019129	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-41	True	NA	NA	False	AATAAA	-18	NA	140398540	140333751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88689.known	chr7	-	2111	14	FSM	ENSG00000157800.18	ENST00000460560.5	2111	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	158.126756135441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGATCTTGGATTGTC	-9	True	NA	NA	False	GGGGCT	-37	NA	140398508	140335320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_8869.known	chr1	-	7554	7	FSM	ENSG00000135821.19	ENST00000331872.11	7554	7	0	0	0	0	multi-exon	FALSE	canonical	3	1972	junction_2	216.48922221056	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTGTGACTCTGTT	0	True	NA	NA	False	AATAAA	-14	NA	182391790	182378097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391678
transcript_88690.nic	chr7	-	3235	14	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	134.002031248404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACACAGAAAGGGAAAATA	-41	True	NA	NA	False	AAAAAG	-11	NA	140398540	140333790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_140335505_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88696.known	chr7	-	2955	12	FSM	ENSG00000157800.18	ENST00000340308.7	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	130.632915751299	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	42	True	NA	NA	False	AATAAA	-18	NA	140398457	140333751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88709.nic	chr7	-	1277	7	ISM	ENSG00000157800.18	ENST00000326232.14	3330	15	-10	21452	-8	-3142	5prime_fragment	FALSE	canonical	3	436	junction_1	49.9380171368023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGACAAACTTCTGATATA	-41	True	NA	NA	False	AATAAA	-19	NA	140398540	140355203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_88711.nnic	chr7	-	517	4	NNC	ENSG00000157800.18	novel	550	2	NA	NA	-8	3728	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	256.70259488798	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGATTTTTGTCT	-41	True	NA	-2	True	AATAAA	-18	NA	140398540	140375530	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_140375655_140380281_140380391_140382437_140382597_140398415
transcript_88713.nic	chr7	-	2952	8	NIC	ENSG00000133606.11	novel	3094	8	NA	NA	109	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	252.329150119442	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTGTGTAATGAGCT	691	False	NA	-12	True	AATAAA	-20	NA	140478817	140453046	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_140454730_140455094_140455234_140455789_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140478599
transcript_88714.known	chr7	-	3094	8	FSM	ENSG00000133606.11	ENST00000255977.7	3094	8	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_2	89.7343016797879	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTTTTTGAAATGTG	3	True	NA	2	True	AATAAA	-34	NA	140479505	140453032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140454730_140455094_140455234_140455789_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
transcript_88718.known	chr7	-	1601	5	FSM	ENSG00000133606.11	ENST00000443720.6	1601	5	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	60.4291941035126	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGAGTCTGTGTGAA	9	True	NA	-43	True	AATAAA	-16	NA	140479499	140456191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
transcript_88719.known	chr7	-	6458	18	FSM	ENSG00000157764.14	ENST00000646891.1	6458	18	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	8.50686675615179	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGGTTGTGGTGGCTCA	2	True	NA	NA	False	AATAAA	-18	NA	140924928	140730664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_140734771_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
transcript_88726.known	chr7	+	726	4	FSM	ENSG00000090266.13	ENST00000464566.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_3	1719.77446841794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGATTTGAATTAGTGA	49	False	NA	NA	False	AATAAA	-25	NA	140696747	140706500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706118
transcript_88728.known	chr7	+	465	4	FSM	ENSG00000090266.13	ENST00000247866.9	465	4	0	0	0	0	multi-exon	FALSE	canonical	3	3020	junction_3	445.789437091349	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	9	True	NA	28	True	ATTAAA	-33	NA	140696707	140706643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706562
transcript_88730.known	chr7	+	420	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1717.49455764947	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	7	True	NA	31	True	ATTAAA	-36	NA	140696987	140706646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
transcript_88733.known	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1724.79100183182	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	64	False	NA	29	True	ATTAAA	-34	NA	140697223	140706644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
transcript_88735.known	chr7	+	503	5	FSM	ENSG00000090266.13	ENST00000472695.5	503	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1815.20763275169	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	11	True	NA	28	True	ATTAAA	-33	NA	140696991	140706643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_140697075_140700869_140700960_140702865_140703011_140704859_140704964_140706562
transcript_88741.known	chr7	-	622	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	440	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGATTTGTTTGG	-12	True	NA	-10	True	AATAAA	-12	NA	141014966	141006168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010618_141014910
transcript_88742.known	chr7	-	688	3	FSM	ENSG00000090263.16	ENST00000496958.5	688	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	505	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	525	False	NA	-9	True	AATAAA	-13	NA	141014429	141006167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010661_141014351
transcript_88743.known	chr7	-	853	3	FSM	ENSG00000090263.16	ENST00000393008.7	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	481.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAAACTTCTTTCATC	-18	True	NA	NA	False	NA	NA	NA	141014679	141006053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010661_141014550
transcript_88744.known	chr7	-	4210	3	FSM	ENSG00000090263.16	ENST00000324787.10	4210	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	250	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTCACCCCGTCTC	2	True	NA	NA	False	AATAAA	-17	NA	141014952	141002609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141010418_141010661_141014910
transcript_88745.known	chr7	-	541	2	FSM	ENSG00000090263.16	ENST00000496641.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGAGGTGTTTAATCAT	5	True	NA	NA	False	AATAGA	-10	NA	141014949	141010158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141010661_141014910
transcript_88748.known	chr7	-	466	2	FSM	ENSG00000090263.16	ENST00000484502.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	13	True	NA	-9	True	AATAAA	-13	NA	141014648	141006167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_141006536_141014550
transcript_88749.known	chr7	+	3628	16	FSM	ENSG00000006530.18	ENST00000649286.2	3628	16	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	26.0524257774375	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTGATTCAGG	1	True	NA	NA	False	TATAAA	-17	NA	141551409	141655244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
transcript_8875.known	chr1	-	4238	7	FSM	ENSG00000135828.11	ENST00000367559.7	4238	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.40342964277702	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGATTTTCTTTAA	-3	True	NA	1	True	AATAAA	-17	NA	182589256	182573633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_182575579_182576255_182576390_182581224_182581358_182582052_182582259_182584080_182584167_182585326_182586971_182589166
transcript_88758.nic	chr7	+	1525	4	ISM	ENSG00000006530.18	ENST00000495028.5	567	5	0	1402	0	566	5prime_fragment	FALSE	canonical	3	164	junction_1	32.6190128606002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	1	True	NA	NA	False	AATAGA	-32	NA	141551409	141597906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561
transcript_8876.known	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	24.1699710384601	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	0	True	NA	-12	True	AATAAA	-19	NA	182604389	182598622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
transcript_88761.known	chr7	+	517	8	FSM	ENSG00000106028.11	ENST00000465167.1	517	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1725.87293499698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACGAAAGAGAAGGAGT	42	True	NA	-1	True	NA	NA	NA	141738405	141750332	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141741748_141741793_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88771.known	chr7	+	677	7	FSM	ENSG00000106028.11	ENST00000265304.11	677	7	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	738.285325753006	2199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	-6	True	NA	44	True	NA	NA	NA	141738357	141750488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88774.known	chr7	+	636	7	FSM	ENSG00000106028.11	ENST00000498107.5	636	7	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	1014.1656121605	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGATTCTTCTTTGG	-6	True	NA	21	True	NA	NA	NA	141738357	141750354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738504_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88776.known	chr7	+	884	7	FSM	ENSG00000106028.11	ENST00000612337.4	884	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	1461.28756011038	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	-30	True	NA	44	True	NA	NA	NA	141738333	141750488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738594_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88778.known	chr7	+	630	7	FSM	ENSG00000106028.11	ENST00000467681.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	1420.73487439893	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATATTTCTGAGTGACC	32	True	NA	-19	True	NA	NA	NA	141738395	141750314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738576_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88780.known	chr7	+	989	7	FSM	ENSG00000106028.11	ENST00000481508.1	989	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	1503.71436412933	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	9	False	NA	17	True	ATTAAA	-19	NA	141738606	141750461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738999_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88782.known	chr7	+	1434	6	FSM	ENSG00000106028.11	ENST00000489378.5	1434	6	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	802.653698677082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGATGAGGTTTCACCA	1	True	NA	NA	False	NA	NA	NA	141738364	141746526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495
transcript_88790.known	chr7	+	2620	2	FSM	ENSG00000106028.11	ENST00000496622.1	2620	2	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGATGTATATATTGA	-6	True	NA	NA	False	AATATA	-27	NA	141738357	141741690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123
transcript_88791.known	chr7	+	1694	2	FSM	ENSG00000106028.11	ENST00000461433.1	1694	2	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACCAAATTTATTAGA	37	True	NA	NA	False	NA	NA	NA	141738400	141740714	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738504_141739123
transcript_88792.known	chr7	+	662	8	FSM	ENSG00000106028.11	ENST00000469123.5	662	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1729.44181156575	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGAGTAATAATCTTT	27	True	NA	12	True	ATTAAA	-14	NA	141738390	141750456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_141738411_141739123_141739191_141741748_141741799_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_88793.known	chr7	+	809	5	FSM	ENSG00000204983.15	ENST00000311737.12	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	1.80277563773199	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTGCT	0	True	NA	10	True	AATAAA	-17	NA	142749471	142753072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_142749525_142750554_142750715_142751773_142752028_142752430_142752568_142752867
transcript_88794.known	chr7	+	809	5	FSM	ENSG00000275896.7	ENST00000539842.6	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	6.60965203320114	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTCCT	1	True	NA	17	True	AATAAA	-17	NA	142770969	142774560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_142771023_142772048_142772209_142773265_142773520_142773918_142774056_142774355
transcript_88796.nnic	chr7	+	876	5	Fusion	ENSG00000211772.11_ENSG00000211764.1	novel	758	4	NA	NA	-68	0	multi-exon	FALSE	canonical	3	131	junction_1	47.2255227604735	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	-8	True	NA	25	True	AATAAA	-29	NA	142796296	142802748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88797.nnic	chr7	+	964	5	Fusion	ENSG00000211772.11_ENSG00000211764.1_ENSG00000211765.1	novel	758	4	NA	NA	40	0	multi-exon	FALSE	canonical	3	33	junction_1	89.579573564513	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	43	False	NA	25	True	AATAAA	-29	NA	142796404	142802748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796611_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88798.nnic	chr7	+	833	5	Fusion	ENSG00000211772.11_ENSG00000211765.1	novel	758	4	NA	NA	29	0	multi-exon	FALSE	canonical	3	13	junction_1	98.2318685559834	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	2	True	NA	25	True	AATAAA	-29	NA	142796588	142802748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796664_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88799.nnic	chr7	+	1021	5	Fusion	ENSG00000211772.11_ENSG00000211766.1_ENSG00000211767.1	novel	758	4	NA	NA	-64	0	multi-exon	FALSE	canonical	3	41	junction_1	86.1191035717395	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	11	False	NA	25	True	AATAAA	-29	NA	142796632	142802748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796896_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_888.known	chr1	+	568	4	FSM	ENSG00000116731.23	ENST00000505823.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	17.1464281994822	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTTCTGCAGCCCAGC	9	True	NA	-72	True	NA	NA	NA	13749435	13823419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_13749488_13773077_13773189_13816426_13816571_13823158
transcript_88800.nnic	chr7	+	918	5	Fusion	ENSG00000211772.11_ENSG00000211768.1_ENSG00000211767.1	novel	758	4	NA	NA	41	0	multi-exon	FALSE	canonical	3	24	junction_1	93.4729238870808	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	30	False	NA	25	True	AATAAA	-29	NA	142796887	142802748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142797048_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88801.nnic	chr7	+	943	5	Fusion	ENSG00000211772.11_ENSG00000211770.1_ENSG00000211769.1	novel	758	4	NA	NA	-12	0	multi-exon	FALSE	canonical	2	5	junction_1	101.693165945407	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	68	False	NA	25	True	AATAAA	-29	NA	142797106	142802748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142797292_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88803.nnic	chr7	+	757	4	Fusion	ENSG00000211772.11_ENSG00000211764.1	novel	758	4	NA	NA	-68	-12	multi-exon	FALSE	canonical	3	17	junction_3	90.2379570296718	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGCATTTCAGGAGTG	-8	True	NA	13	True	AATAAA	-17	NA	142796296	142802736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802502
transcript_88805.known	chr7	+	758	4	FSM	ENSG00000211772.11	ENST00000466254.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	4.64279609239471	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	76	False	NA	25	True	AATAAA	-29	NA	142801040	142802748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_142801428_142801943_142801962_142802104_142802212_142802502
transcript_88806.known	chr7	-	447	2	FSM	ENSG00000237254.2	ENST00000417977.2	447	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGAGCTGGGTGGGGC	-3	True	NA	NA	False	NA	NA	NA	142813399	142812585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_142812878_142813244
transcript_88807.nnic	chr7	-	322	3	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTATGTAGCTTGGAGTT	6114	False	NA	NA	False	AATAAA	-18	NA	142855002	142842054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr7_-_142842220_142845255_142845371_142854960
transcript_88810.known	chr7	-	2494	19	FSM	ENSG00000197993.9	ENST00000355265.7	2494	19	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_13	19.9308217171543	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCCTGCTATGTT	-19	True	NA	-14	True	AATAAA	-32	NA	142962363	142941113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
transcript_88813.nnic	chr7	-	2537	19	NNC	ENSG00000197993.9	novel	2494	19	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	29.023245260172	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCCTGCTATGTT	NA	False	NA	-14	True	AATAAA	-32	NA	142962370	142941113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953977_142954183_142954373_142954464_142954544_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
transcript_88820.known	chr7	-	786	6	FSM	ENSG00000197993.9	ENST00000467543.6	786	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.3119814937164	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGGGATGCACTGGC	17	True	NA	NA	False	NA	NA	NA	142962327	142957829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961869_142962203
transcript_88821.nnic	chr7	-	2082	5	NIC	ENSG00000197993.9	novel	1856	11	NA	NA	-7	1391	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	37.0270171631472	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACTGAGGCCATCCAA	NA	False	NA	NA	False	AATAGA	-12	NA	142962370	142956438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_142957974_142958303_142958429_142960927_142961105_142961794_142961873_142962203
transcript_88825.known	chr7	+	1032	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	20.3670402005449	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	4	True	NA	29	True	AATAAA	-23	NA	143263440	143269115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_88827.known	chr7	+	1185	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	20.9204843793509	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	19	True	NA	29	True	AATAAA	-23	NA	143263455	143269115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
transcript_8883.known	chr1	+	2543	13	FSM	ENSG00000135838.14	ENST00000367553.6	2543	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	14.455871548344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	-2	True	NA	NA	False	AATAAA	-19	NA	182789772	182830384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_88830.known	chr7	+	850	7	FSM	ENSG00000197448.14	ENST00000443571.6	850	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	118.4604950559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCAATTCTGCTTTCC	4	True	NA	-24	True	NA	NA	NA	143263440	143269062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143263586_143264085_143264168_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_88836.known	chr7	+	1257	4	FSM	ENSG00000178826.11	ENST00000409244.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGATCCCAAAGCCTAT	-8	True	NA	NA	False	ATTAAA	-15	NA	143284950	143287296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143284975_143285347_143285446_143285940_143286203_143286423
transcript_88839.known	chr7	+	1724	2	FSM	ENSG00000178826.11	ENST00000471161.1	1724	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTCCGTGAAGTTA	388	False	NA	3	True	AATAAA	-16	NA	143285346	143288048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143285446_143286423
transcript_88841.known	chr7	+	4089	11	FSM	ENSG00000106144.20	ENST00000310447.10	4089	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	10.675204916066	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCAATATCTGTTT	3	True	NA	20	True	AATAAA	-20	NA	143288350	143307696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143288530_143291539_143291691_143292299_143292468_143292616_143292699_143294229_143294325_143294596_143294774_143299922_143300052_143300203_143300295_143303783_143303934_143304673_143304784_143304939
transcript_88842.nnic	chr7	+	673	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2044	73	multi-exon	FALSE	canonical	1	6	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAACAGCTTCCATTAT	146	False	NA	NA	False	ATTAAA	-12	NA	143361854	143364302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr7_+_143362058_143363189_143363258_143363900
transcript_88843.known	chr7	-	648	2	FSM	ENSG00000232533.2	ENST00000429630.2	1186	2	535	3	-241	0	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTATATGACTCAGTAT	2562	False	NA	-11	True	AATAAA	-19	NA	143380495	143379691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143380110_143380265
transcript_88846.nnic	chr7	+	1083	3	FSM	ENSG00000229153.6	ENST00000690912.1	1034	3	-49	0	-37	0	multi-exon	FALSE	canonical	1	2	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGACAATTTTTACTT	NA	False	NA	10	True	AATAAA	-20	NA	143407746	143496772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_143407891_143415067_143415200_143495965
transcript_88852.known	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_12	40.6425893516168	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	8	True	NA	-8	True	NA	NA	NA	143408856	143391128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_88855.nnic	chr7	-	2827	16	NIC	ENSG00000146904.9	novel	3310	18	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_12	102.88755458698	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	-10	True	NA	-8	True	NA	NA	NA	143408874	143391128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_88857.nic	chr7	-	1387	3	ISM	ENSG00000146904.9	ENST00000488068.5	2922	16	-69	9027	-18	388	5prime_fragment	FALSE	canonical	3	345	junction_2	26	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATAACTCATCATGT	-10	True	NA	-13	True	AATAAA	-13	NA	143408874	143400437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_143401606_143407610_143407679_143408723
transcript_88858.nnic	chr7	+	3254	7	NNC	ENSG00000223459.6	novel	2233	7	NA	NA	173	4244	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_6	18.8148877222268	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGAAGAACAGAGCAAG	NA	False	NA	NA	False	AATAAA	-9	NA	143598211	143609083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_143599034_143599321_143599420_143600526_143600741_143601387_143601628_143602773_143603112_143604584_143604836_143607792
transcript_88859.known	chr7	-	2517	3	FSM	ENSG00000253882.7	ENST00000494978.6	2518	3	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTGTTTTTTTTT	7	True	NA	NA	False	AATAAA	-15	NA	143836708	143811968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143813780_143833246_143833884_143836639
transcript_88863.known	chr7	-	5754	9	FSM	ENSG00000198420.10	ENST00000479870.6	5754	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	30.2549066268597	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACTTCACATTGATT	-24	True	NA	NA	False	AATAAA	-17	NA	143902176	143851374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_88865.known	chr7	-	3343	9	FSM	ENSG00000198420.10	ENST00000355951.2	3343	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	58.929512979491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCGGTCAGCTAATTCT	26	True	NA	NA	False	NA	NA	NA	143902126	143853695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902026
transcript_88866.known	chr7	+	2588	1	FSM	ENSG00000288784.1	ENST00000486333.2	2615	1	0	27	0	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAATAAAGATGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	144183465	144186053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_144183500_144186100
transcript_88868.known	chr7	-	2609	2	FSM	ENSG00000213214.6	ENST00000378115.3	2609	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTCAAACCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	144195833	144186082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144188396_144195537
transcript_88876.known	chr7	+	5482	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	41.6993613223737	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTCAAACTCCTCA	-4	True	NA	23	True	AATAAA	-20	NA	144355401	144380632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
transcript_88878.known	chr7	-	1920	10	FSM	ENSG00000196511.15	ENST00000378098.8	1920	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.89897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAAGCGGTTGGACT	-33	True	NA	NA	False	NA	NA	NA	144836053	144452581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144606928_144607051_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_8888.known	chr1	+	2144	13	FSM	ENSG00000135838.14	ENST00000488424.5	2144	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	22.6421435969889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	182789292	182830384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182829602
transcript_88881.known	chr7	-	2439	9	FSM	ENSG00000196511.15	ENST00000360057.7	2439	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2.87228132326901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTCCTGAAGCTTAG	-33	True	NA	NA	False	AATAAA	-22	NA	144836053	144451940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_88883.known	chr7	-	2283	8	FSM	ENSG00000196511.15	ENST00000378099.7	2283	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.61967413123427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAATATAGTTTCCT	-33	True	NA	NA	False	AATAAA	-13	NA	144836053	144451949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144453664_144548490_144548603_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_88885.known	chr7	-	521	2	FSM	ENSG00000196511.15	ENST00000548460.2	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGTGTTTTAAATCTA	21	True	NA	NA	False	AATAAA	-18	NA	144835999	144835130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_144835619_144835966
transcript_88896.known	chr7	+	6076	4	FSM	ENSG00000174469.23	ENST00000463592.3	6076	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349.077196174269	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTTCGTGTTTTGTA	0	True	NA	28	True	AATAAA	-31	NA	148339460	148420998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148339634_148383648_148383889_148409390_148409472_148415416
transcript_889.known	chr1	+	1843	4	FSM	ENSG00000171729.14	ENST00000376014.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.1154629969146	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTACACTTAACTAGT	0	True	NA	NA	False	NA	NA	NA	15152565	15220339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_15152785_15210489_15210563_15214894_15215432_15219325
transcript_88901.known	chr7	+	3086	22	FSM	ENSG00000055130.18	ENST00000662716.1	3086	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	132.502102837034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTAATGTGTGAAAA	298	False	NA	4	True	NA	NA	NA	148698071	148800988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148698260_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88903.known	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	124.124982730587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	0	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88905.known	chr7	+	3147	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_8	62.6037460935311	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTAGTGTCTTCCTGT	-5	True	NA	24	True	AATAAA	-25	NA	148698902	148801110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88912.nic	chr7	+	1800	2	ISM	ENSG00000055130.18	ENST00000655324.1	2887	21	-27	69411	-18	-28914	5prime_fragment	FALSE	canonical	3	549	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCAGTGGTTTTTAG	103	False	NA	10	True	CATAAA	-21	NA	148698838	148731570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_148699030_148729961
transcript_88914.known	chr7	+	3056	22	FSM	ENSG00000055130.18	ENST00000662670.1	3056	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	137.893152628947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTCGCATT	15	True	NA	8	True	AATAAA	-13	NA	148698922	148801024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756967_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_88915.known	chr7	-	2591	20	FSM	ENSG00000106462.12	ENST00000460911.5	2591	20	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_17	62.2729671500654	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	0	True	NA	-16	True	AATAAA	-16	NA	148884245	148807384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_88916.known	chr7	+	1906	1	FSM	ENSG00000281189.1	ENST00000627071.1	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGGTGTTGATATG	NA	False	NA	NA	False	AATAAA	-20	NA	148987526	148989432	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_148987500_148989400
transcript_88917.known	chr7	-	2921	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1287.31846856408	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAGAACTGCGTTAGAA	-2	True	NA	-23	True	AATAAA	-14	NA	149028662	149003067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
transcript_88921.known	chr7	-	3198	4	FSM	ENSG00000204947.9	ENST00000378061.7	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	14.1656862405839	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCCATGTGTTCTTT	-3	True	NA	-4	True	AATAAA	-28	NA	149126324	149102783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_149105567_149112136_149112296_149118221_149118349_149126195
transcript_88922.nnic	chr7	+	2825	6	NNC	ENSG00000170260.9	novel	2807	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.7049369445833	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATACTGGATGTTTTTC	44	False	NA	6	True	AATAAA	-30	NA	149239699	149255606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr7_+_149239803_149249348_149249421_149250163_149250549_149250680_149250808_149252705_149252796_149253558
transcript_88923.known	chr7	+	2807	5	FSM	ENSG00000170260.9	ENST00000335870.7	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	4.32290411644765	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATACTGGATGTTTTTC	-5	True	NA	6	True	AATAAA	-30	NA	149239650	149255606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149239803_149250158_149250549_149250680_149250808_149252705_149252796_149253558
transcript_88925.known	chr7	+	3763	17	FSM	ENSG00000133619.18	ENST00000496259.6	3827	17	60	4	-46	0	multi-exon	FALSE	canonical	3	16	junction_1	13.5271717295228	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	-8	True	NA	16	True	ATTAAA	-16	NA	149715010	149734571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_88927.known	chr7	+	1666	4	FSM	ENSG00000171130.19	ENST00000479613.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	97.537457192381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTACTGTTTGGTGA	-31	True	NA	17	True	AATAAA	-12	NA	149873975	149880689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149874170_149875597_149875646_149878677_149878747_149879334
transcript_88928.known	chr7	+	1723	4	FSM	ENSG00000171130.19	ENST00000425642.3	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	18.263503375737	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTGGTGACAAAGC	-38	True	NA	23	True	AATAAA	-18	NA	149873968	149880695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879334
transcript_88930.known	chr7	-	685	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	2632	junction_5	159.731023912075	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	13	True	NA	-15	True	AATAAA	-13	NA	150341629	150338328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_88938.known	chr7	-	583	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	1202.50779623252	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-20	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_88941.known	chr7	+	1033	7	FSM	ENSG00000002933.9	ENST00000004103.8	1033	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.21335164821342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCGCTTAGTTATTCC	-2	True	NA	6	True	AATAAA	-21	NA	150800768	150805118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_150800829_150801535_150801725_150802214_150802326_150803399_150803457_150803619_150803833_150804361_150804473_150804826
transcript_88942.known	chr7	-	1430	7	FSM	ENSG00000106565.18	ENST00000447204.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	2.64575131106459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGGTTTCCCTTTGTTT	-3	True	NA	5	True	AATAAA	-30	NA	150801360	150791286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800992
transcript_88943.nic	chr7	+	918	6	NIC	ENSG00000002933.9	novel	1033	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	1.74355957741627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTCTCGCTTAGTTA	-2	True	NA	2	True	AATAAA	-17	NA	150800768	150805114	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_150800829_150801535_150801725_150802214_150802326_150803399_150803457_150803619_150803833_150804826
transcript_88945.known	chr7	-	1115	7	FSM	ENSG00000106565.18	ENST00000326442.10	1115	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	3.35410196624968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCCCAGAAAGATATG	1	True	NA	-9	True	AATAAA	-16	NA	150800364	150791300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800297
transcript_88947.known	chr7	-	1795	9	ISM	ENSG00000181652.20	ENST00000639579.2	3423	14	5693	21	-2805	10	3prime_fragment	FALSE	canonical	1	1	junction_1	2.48746859276655	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGCTCATGGCTGTTGC	9946	False	NA	-25	True	NA	NA	NA	151018801	151015171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_-_151015714_151015881_151016024_151016108_151016236_151016430_151016528_151016687_151016822_151017035_151017273_151017870_151018051_151018293_151018448_151018619
transcript_88949.known	chr7	+	1111	6	FSM	ENSG00000164867.11	ENST00000477227.1	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	9.2217135067188	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGATTCAGCATTAT	-10	True	NA	NA	False	NA	NA	NA	151010532	151014289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
transcript_88952.known	chr7	+	4656	16	FSM	ENSG00000197150.13	ENST00000358849.9	4656	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	9.87026961243827	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	-2	True	NA	7	True	AATAAA	-20	NA	151028449	151047782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_88957.known	chr7	+	1994	15	FSM	ENSG00000197150.13	ENST00000482309.5	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19.7826196651588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGCCTACTGGGGACT	NA	False	NA	NA	False	GGGGCT	-7	NA	151028425	151045409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151028611_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_88960.known	chr7	+	1596	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	20.8776565545532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	15	False	NA	19	True	CATAAA	-29	NA	151028466	151037570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
transcript_88961.nic	chr7	+	1610	10	NIC	ENSG00000197150.13	novel	1596	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	23.8736385430447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAAGGGTGAAGACCCG	NA	False	NA	35	True	AGTAAA	-16	NA	151028425	151037586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037283
transcript_88965.known	chr7	+	2199	14	FSM	ENSG00000197150.13	ENST00000466514.5	2199	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	20.4982319918792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAGTCTGCCAGAGTCA	-2	True	NA	13	True	NA	NA	NA	151028449	151045562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151028611_151034272_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_88966.known	chr7	+	4119	23	FSM	ENSG00000164889.15	ENST00000413384.7	4119	23	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_2	87.1355930159882	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	-22	True	NA	7	True	AGTAAA	-16	NA	151059588	151076523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151059763_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_88968.known	chr7	-	1122	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	50.5493785265604	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGATGTGGTGGTC	13	True	NA	-5	True	CATAAA	-18	NA	151057897	151053814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_8897.known	chr1	+	1536	11	FSM	ENSG00000135838.14	ENST00000367555.5	1536	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	31.2416388814672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	-6	True	NA	NA	False	AATAAA	-19	NA	182789768	182830384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182825780_182825821_182829602
transcript_88972.known	chr7	-	783	11	FSM	ENSG00000164885.13	ENST00000297518.4	783	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.0173507275901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGACCCCCGGCCTC	4139	False	NA	NA	False	NA	NA	NA	151057848	151054008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_88978.known	chr7	-	1794	10	FSM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_9	49.9164734430193	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	0	True	NA	-38	True	ATTAAA	-16	NA	151080809	151076623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_88979.known	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	136.656729539365	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	8639	False	NA	-40	True	ATTAAA	-14	NA	151080862	151076625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
transcript_8898.known	chr1	+	4493	28	FSM	ENSG00000135829.17	ENST00000367549.4	4493	28	0	0	0	0	multi-exon	TRUE	canonical	3	791	junction_11	102.208466599978	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTCCCATAT	-5	True	NA	8	True	AATAAA	-21	NA	182839346	182887982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_88981.nnic	chr7	-	1753	9	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	140.052668664328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	8618	False	NA	-38	True	ATTAAA	-16	NA	151080883	151076623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_151076833_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_88983.known	chr7	-	1402	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	146.428310104296	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	1	True	NA	-40	True	ATTAAA	-14	NA	151080842	151076625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
transcript_88985.nic	chr7	-	1898	9	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	336	junction_8	52.9243268733765	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-8	True	NA	-40	True	ATTAAA	-14	NA	151080817	151076625	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_88987.known	chr7	-	1826	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_8	52.7802046225666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAAGTTCCTTTCCTTC	19	True	NA	-60	True	NA	NA	NA	151080790	151076645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_89.known	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1268	junction_3	641.557626016557	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
transcript_89008.nic	chr7	-	2894	15	NIC	ENSG00000033050.9	novel	4527	15	NA	NA	32	-2026	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	81.1981702819889	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCCCTACCTTCCTTCTC	6100	False	NA	-14	True	AATAAA	-15	NA	151227173	151213509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151226737
transcript_89009.nic	chr7	-	2794	15	NIC	ENSG00000033050.9	novel	4527	15	NA	NA	13	-2026	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	79.7108294181576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCCCTACCTTCCTTCTC	23	True	NA	-14	True	AATAAA	-15	NA	151227192	151213509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151226856
transcript_89010.known	chr7	-	4527	15	FSM	ENSG00000033050.9	ENST00000287844.7	4527	15	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_14	32.7206013866194	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	10	True	NA	-2	True	AATACA	-15	NA	151227205	151211483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151227162
transcript_89013.known	chr7	-	1755	4	FSM	ENSG00000082014.17	ENST00000470588.1	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGGGGCTGGATTAAAA	7804	False	NA	-37	True	NA	NA	NA	151241492	151239007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111
transcript_89016.known	chr7	+	3107	15	FSM	ENSG00000013374.17	ENST00000413040.7	3107	15	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_12	92.4201806745603	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	-25	True	NA	16	True	AATAAA	-23	NA	151341771	151378449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374202_151375847_151375944_151376633_151376812_151377046
transcript_89018.known	chr7	+	3109	15	FSM	ENSG00000013374.17	ENST00000568733.6	3109	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	110.124234112095	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	15	True	NA	16	True	AATAAA	-23	NA	151341811	151378449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_89025.nic	chr7	+	1893	12	ISM	ENSG00000013374.17	ENST00000413040.7	3107	15	-40	3825	-40	0	5prime_fragment	FALSE	canonical	3	193	junction_9	81.7079054815494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTAGTTTTATTTATTT	23	False	NA	4	True	ATTAAA	-14	NA	151341731	151374624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096
transcript_89033.known	chr7	+	1703	9	FSM	ENSG00000013374.17	ENST00000468404.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_8	107.314301819469	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	7	True	NA	31	True	AATAAA	-28	NA	151341803	151361249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_89035.nic	chr7	+	1814	9	NIC	ENSG00000013374.17	novel	1703	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_8	134.076412448275	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	15	True	NA	31	True	AATAAA	-28	NA	151341811	151361249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_89037.nic	chr7	+	1919	8	ISM	ENSG00000013374.17	ENST00000468404.5	1703	9	-72	0	-40	0	intron_retention	FALSE	canonical	3	312	junction_1	32.7326835353989	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	23	False	NA	31	True	AATAAA	-28	NA	151341731	151361249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140
transcript_89040.nic	chr7	+	818	5	FSM	ENSG00000243836.6	ENST00000690609.1	782	5	-36	0	-29	0	multi-exon	FALSE	canonical	2	5	junction_1	13.5369863706809	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	NA	False	NA	31	True	AATAAA	-33	NA	151409206	151413048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151409383_151411227_151411313_151411669_151411793_151411966_151412071_151412718
transcript_89043.known	chr7	+	704	4	FSM	ENSG00000243836.6	ENST00000480632.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.195028426722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	-18	True	NA	31	True	AATAAA	-33	NA	151409235	151413048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_151409383_151411669_151411793_151411966_151412071_151412718
transcript_89047.known	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_6	118.998199266087	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	3	True	NA	-4	True	AATAAA	-19	NA	151519895	151466011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
transcript_89048.known	chr7	-	744	8	FSM	ENSG00000106615.10	ENST00000496004.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	629.095041649965	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGGAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	151520120	151467100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519897
transcript_89051.known	chr7	-	2318	12	FSM	ENSG00000106617.15	ENST00000418337.6	2318	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_11	18.8122520301606	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAAGAAGTTATTT	6	True	NA	37	True	ATTAAA	-21	NA	151632353	151556123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068
transcript_89053.known	chr7	-	3279	16	FSM	ENSG00000106617.15	ENST00000287878.9	3279	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	55.2140883792855	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTTGTTAAAGAAGTTA	3	True	NA	34	True	ATTAAA	-18	NA	151877115	151556126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068_151632139_151675419_151675638_151781151_151781432_151786469_151786542_151876506
transcript_89054.known	chr7	+	2739	12	FSM	ENSG00000178234.13	ENST00000430044.7	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_8	19.839438141871	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	-34	True	NA	11	True	AATAAA	-16	NA	152025673	152122340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_152025885_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_89056.nic	chr7	+	2387	4	ISM	ENSG00000178234.13	ENST00000430044.7	2739	12	62	17448	-6	0	5prime_fragment	FALSE	canonical	3	251	junction_1	18.6964048831735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTTATCAATGTG	28	True	NA	25	True	AATAAA	-32	NA	152025735	152104892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_152025885_152094189_152094523_152100797_152100922_152103111
transcript_89060.known	chr7	-	4771	3	FSM	ENSG00000196584.3	ENST00000359321.2	4771	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	10	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGATGTCTTTTGTTT	12	True	NA	-29	True	TATAAA	-1	NA	152676141	152644775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_152649364_152660700_152660783_152676040
transcript_89063.known	chr7	+	2213	12	FSM	ENSG00000133627.18	ENST00000256001.13	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	50.8935041074063	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTGTAGTGTGGTGG	-28	True	NA	19	True	AATAAA	-26	NA	152759751	152855378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_89066.known	chr7	-	3711	21	FSM	ENSG00000157212.19	ENST00000397192.5	3711	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	39.1860625733181	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGAGTAATCCTTTAT	-16	True	NA	-7	True	AATAAA	-16	NA	155002972	154943690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_154944163_154946362_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_89067.nnic	chr7	+	965	3	Genic_Genomic	ENSG00000273344.1	novel	2256	1	NA	NA	-3	-835	multi-exon	FALSE	canonical	0	0	junction_1	20.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGGTTGTTTTAGT	-15	True	NA	24	True	AATATA	-22	NA	155003444	155004868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr7_+_155003709_155003961_155004135_155004340
transcript_89069.known	chr7	+	2256	1	FSM	ENSG00000273344.1	ENST00000608317.1	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	-12	True	NA	28	True	AATAAA	-38	NA	155003447	155005703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_155003400_155005700
transcript_89070.known	chr7	+	2908	6	FSM	ENSG00000186480.13	ENST00000340368.9	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	25.4950975679639	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	0	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_89071.known	chr7	-	2977	7	FSM	ENSG00000283128.3	ENST00000635770.1	2977	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.7548438699345	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGTATCTTGCAAATT	4	True	NA	NA	False	ATTAAA	-4	NA	155644396	155501146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_155503106_155507019_155507117_155508893_155509098_155545830_155545944_155576549_155576834_155643467_155643605_155644213
transcript_89073.known	chr7	-	1356	3	FSM	ENSG00000216895.9	ENST00000460022.6	1356	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGTCTCAGTAATGAT	338	False	NA	-11	True	AATAAA	-16	NA	155644377	155641915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_155642971_155643467_155643605_155644213
transcript_8908.known	chr1	-	5441	11	FSM	ENSG00000157064.11	ENST00000287713.7	5441	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	3.49428104193123	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTCTTGGTCAAGA	6	True	NA	-2	True	AATAAA	-19	NA	183418380	183248236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_183252744_183261001_183261070_183261201_183261304_183278552_183278630_183283994_183284040_183284709_183284791_183286661_183286789_183290127_183290207_183292789_183292858_183293704_183293794_183418182
transcript_89081.known	chr7	-	597	2	FSM	ENSG00000216895.9	ENST00000469539.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGGTGACAGAGCG	-6	True	NA	NA	False	NA	NA	NA	155644406	155643200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_155643605_155644213
transcript_89087.known	chr7	-	947	4	FSM	ENSG00000182648.14	ENST00000447933.7	957	4	10	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-14	True	NA	2	True	AATAAA	-36	NA	156640567	156472096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156472712_156605187_156605381_156605657_156605765_156640535
transcript_89088.known	chr7	-	640	4	FSM	ENSG00000182648.14	ENST00000418309.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.92160768674447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCATGCATTTTTATT	-28	True	NA	NA	False	ATTAAA	-17	NA	156640581	156603617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156603912_156605187_156605381_156605657_156605765_156640535
transcript_89089.known	chr7	-	2227	5	FSM	ENSG00000182648.14	ENST00000651649.1	2227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.59807621135332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATATACCAAAAAAAAAA	-46	True	NA	NA	False	NA	NA	NA	156640599	156388921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156389184_156441229_156441381_156471154_156472712_156605187_156605381_156640535
transcript_89090.known	chr7	-	1709	2	FSM	ENSG00000182648.14	ENST00000664734.1	1709	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGACTCACCCTGAATT	-14	True	NA	NA	False	AATAAA	-18	NA	156640567	156619945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156621623_156640535
transcript_89091.known	chr7	-	545	2	FSM	ENSG00000182648.14	ENST00000435354.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACAATTATTGTGTT	-10	True	NA	-10	True	AGTAAA	-20	NA	156640563	156639431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156639949_156640535
transcript_89092.known	chr7	-	7950	17	FSM	ENSG00000105983.23	ENST00000353442.10	7950	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	74.4691368538	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCACATCCCAATATATG	-13	True	NA	43	True	NA	NA	NA	156893183	156677790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
transcript_89095.known	chr7	+	1679	9	FSM	ENSG00000105982.17	ENST00000317955.10	1679	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.0178344238091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAATTTTAATGTCTTA	-10	True	NA	NA	False	AATAAA	-42	NA	156640773	156677130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_156640812_156643800_156643893_156644498_156644758_156654575_156654719_156657540_156657574_156658127_156658253_156658461_156658571_156675695_156675864_156676418
transcript_89096.known	chr7	+	1893	9	FSM	ENSG00000105982.17	ENST00000432459.6	1893	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	6.65089279721151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGCAAATTTTAAT	18	True	NA	NA	False	AATAAA	-36	NA	156640746	156677124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_156641005_156643800_156643893_156644498_156644758_156654575_156654719_156657540_156657574_156658127_156658253_156658461_156658571_156675695_156675864_156676418
transcript_89097.nic	chr7	+	835	4	ISM	ENSG00000105982.17	ENST00000317955.10	1679	9	-100	22209	0	0	5prime_fragment	FALSE	canonical	0	0	junction_1	9.20144916122817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATTCTCAAGTACTAA	-8	True	NA	NA	False	ATTAAA	-21	NA	156640673	156654921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr7_+_156640812_156643800_156643893_156644498_156644758_156654575
transcript_89098.known	chr7	+	904	4	FSM	ENSG00000105982.17	ENST00000469382.1	904	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.90668171555645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATTCTCAAGTACTAA	20	True	NA	NA	False	ATTAAA	-21	NA	156640748	156654921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_156640956_156643800_156643893_156644498_156644758_156654575
transcript_8910.known	chr1	+	4642	23	FSM	ENSG00000116698.22	ENST00000507469.5	4642	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	103.759735180021	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATCTGTGTATCGATTC	0	True	NA	16	True	ATTAAA	-16	NA	183472502	183554188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183552976
transcript_89100.known	chr7	+	2489	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_9	681.616868596689	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGCCTGCTGTCCTTTGT	-6	True	NA	110	True	AATAAA	-21	NA	157337003	157417439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
transcript_89102.nnic	chr7	+	2288	9	NIC	ENSG00000105993.15	novel	2489	10	NA	NA	-10	2	combination_of_known_splicesites	FALSE	canonical	3	103	junction_8	996.081816104982	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCTCGCCTGCTGTCCT	-16	True	NA	106	True	AATAAA	-17	NA	157336993	157417435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157416015
transcript_89104.known	chr7	+	852	8	FSM	ENSG00000105993.15	ENST00000417758.5	852	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1056.81000551428	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGTAAGGAGCAGCTG	0	True	NA	NA	False	AAGAAA	-43	NA	157337009	157385605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_157337151_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540
transcript_89106.known	chr7	+	1159	7	FSM	ENSG00000105993.15	ENST00000443280.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	1214.09467871698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGGCTTTCTGTGGCG	15	True	NA	NA	False	NA	NA	NA	157337024	157416475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157409794_157410002_157416015
transcript_89111.known	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_28	207.350351741556	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-15	True	NA	-5	True	AATAAA	-12	NA	158704804	158631313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
transcript_89112.known	chr7	-	4049	28	FSM	ENSG00000146918.20	ENST00000356309.8	4049	28	0	0	0	0	multi-exon	TRUE	canonical	3	766	junction_27	76.4805219202652	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACCAAAAATACAAAAT	-15	True	NA	NA	False	NA	NA	NA	158704804	158631168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_89119.nic	chr7	-	4011	27	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-27	0	intron_retention	FALSE	canonical	3	766	junction_26	77.554113575905	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-42	True	NA	-5	True	AATAAA	-12	NA	158704831	158631313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_8912.nic	chr1	-	2076	14	ISM	ENSG00000116701.15	ENST00000367535.8	2267	15	3369	0	3369	0	3prime_fragment	TRUE	canonical	0	0	junction_1	1.02628185108664	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTGTTGCTTAAAC	3824	False	NA	-2	True	AATAAA	-22	NA	183587090	183555561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_183556231_183560095_183560274_183563194_183563307_183563433_183563586_183564004_183564031_183565703_183565780_183566919_183566989_183567203_183567346_183569141_183569186_183570779_183570840_183573184_183573293_183574486_183574622_183577598_183577708_183586894
transcript_89121.nic	chr7	-	3790	27	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_4	138.553580518716	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-42	True	NA	-5	True	AATAAA	-12	NA	158704831	158631313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_8913.known	chr1	+	855	3	FSM	ENSG00000286966.1	ENST00000665299.1	855	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	8403	False	NA	NA	False	AATAAA	-22	NA	183613536	183619335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_183613790_183616000_183616199_183618931
transcript_89132.known	chr7	+	3789	25	FSM	ENSG00000126870.16	ENST00000407559.8	3789	25	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	11.6054943884352	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	-40	True	NA	7	True	ATTAAA	-20	NA	158856557	158946189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr7_+_158856751_158869854_158869909_158871141_158871563_158876608_158876692_158879683_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158902596_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
transcript_89135.known	chr8	+	2783	6	FSM	ENSG00000172748.14	ENST00000308811.8	2783	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAAGTGTTGTTGCTGA	135	False	NA	NA	False	ATTAAA	-22	NA	232199	247342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_232416_240823_240908_242886_243014_243721_243806_244618_244702_245153
transcript_89136.known	chr8	-	736	3	FSM	ENSG00000223508.5	ENST00000606975.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATAAGAGTGACA	26	False	NA	NA	False	CATAAA	-8	NA	232211	213185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_213711_219289_219418_232128
transcript_89137.known	chr8	+	10356	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	2.58676593929396	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	3	True	NA	3	True	ATTAAA	-16	NA	406957	477967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_89138.known	chr8	+	2360	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	12.9801531192818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	406807	469871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_89139.known	chr8	-	630	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACATCATTTTTGAGATA	NA	False	NA	0	True	AATAAA	-28	NA	451343	450713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_450700_451300
transcript_89141.nnic	chr8	-	2011	7	NNC	ENSG00000104714.14	novel	1798	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	107.939412017421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	NA	False	NA	-55	True	ATTAAA	-18	NA	731254	664199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_664677_668597_668793_672021_672205_673288_674048_692477_692613_715860_716008_731139
transcript_89144.nic	chr8	-	1890	6	NIC	ENSG00000104714.14	novel	1551	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	87.798405452491	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAATGGAAAACATT	NA	False	NA	-12	True	AATAAA	-17	NA	731254	614745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_615285_668597_668793_673288_674048_692477_692613_715860_716008_731139
transcript_89148.nnic	chr8	-	1818	6	NNC	ENSG00000104714.14	novel	1798	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	96.0699744977587	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	NA	False	NA	-55	True	ATTAAA	-18	NA	731254	664199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_664677_668597_668783_673288_674048_692477_692613_715860_716008_731139
transcript_89149.known	chr8	-	1798	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	23.8243572840906	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-21	True	NA	-55	True	ATTAAA	-18	NA	731224	664199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
transcript_8915.known	chr1	-	1637	4	FSM	ENSG00000162704.16	ENST00000294742.6	1637	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	429.392076726569	848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTTCTCAAAAAATGACC	144	False	183635784	NA	False	AAGAAA	-45	NA	183635757	183626457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_183627595_183630460_183630638_183633081_183633164_183635516
transcript_89153.nic	chr8	-	728	5	NIC	ENSG00000104714.14	novel	682	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	118.579878141277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	0	True	NA	NA	False	AATAAA	-5	NA	731203	673864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_674048_690897_691097_692477_692613_715860_716008_731139
transcript_89156.nic	chr8	-	580	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-30	9665	-30	0	5prime_fragment	FALSE	canonical	3	238	junction_3	10.2740233382816	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	NA	False	NA	NA	False	AATAAA	-5	NA	731254	673864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_89157.nic	chr8	-	459	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-30	9786	-30	-121	5prime_fragment	FALSE	canonical	3	238	junction_3	10.2740233382816	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCCCAATAATGT	NA	False	NA	NA	False	CATAAA	-13	NA	731254	673985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_8916.nnic	chr1	+	1059	3	NNC	ENSG00000143344.16	novel	5100	19	NA	NA	24	-206288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGAACTTGAAGGCA	6	True	NA	NA	False	NA	NA	NA	183636108	183722243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_183636502_183697402_183697513_183721687
transcript_89161.known	chr8	+	2001	4	FSM	ENSG00000182372.10	ENST00000637083.1	2001	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.5570693168628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTCTCTCAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	1763814	1781357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763886_1765067_1765224_1770931_1771598_1780249
transcript_89162.nnic	chr8	+	1840	4	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-29	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.9473501841901	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	-1	True	NA	15	True	AATAAA	-15	NA	1763730	1782742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_1763886_1770931_1771598_1780249_1780882_1782355
transcript_89164.known	chr8	+	1958	4	FSM	ENSG00000182372.10	ENST00000635970.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.9473501841901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTTTACAGAACCCAAA	4	True	NA	6	True	AATAAA	-6	NA	1763814	1782681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763886_1770931_1771598_1780249_1781145_1782355
transcript_8917.known	chr1	+	1834	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	142.903813804951	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	-30	True	NA	17	True	AATAAA	-19	NA	184051698	184074212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
transcript_89170.known	chr8	+	1769	3	FSM	ENSG00000182372.10	ENST00000519254.2	1769	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	81.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	1	True	NA	NA	False	NA	NA	NA	1763759	1781300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763812_1770931_1771598_1780249
transcript_89173.known	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	15	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	8	True	NA	27	True	AATATA	-43	NA	1763788	1786570	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763886_1770931_1771598_1780249
transcript_89175.nnic	chr8	+	1739	3	NNC	ENSG00000182372.10	novel	7084	3	NA	NA	-29	23	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	69	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCTAGACCGAAGT	-1	True	NA	NA	False	NA	NA	NA	1763730	1781380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_1763886_1770931_1771598_1780462
transcript_89176.known	chr8	+	1897	3	FSM	ENSG00000182372.10	ENST00000637156.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	76	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTCTCTCAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	1763799	1781354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763926_1770931_1771598_1780249
transcript_8918.known	chr1	+	1907	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	82.1747376022583	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	1	True	NA	17	True	AATAAA	-19	NA	184051729	184074212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
transcript_89180.known	chr8	+	1807	3	FSM	ENSG00000182372.10	ENST00000635751.1	1807	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	82	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACCTGTAATCCCAGC	-4	True	NA	NA	False	ACTAAA	-28	NA	1763776	1781225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_1763942_1770931_1771598_1780249
transcript_89184.known	chr8	-	579	2	FSM	ENSG00000253982.3	ENST00000518481.2	621	2	42	0	36	0	multi-exon	FALSE	canonical	3	264	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGTGGGAAAACGTTG	1528	False	NA	-20	True	AATAAA	-27	NA	1763297	1762624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_1762929_1763022
transcript_89188.known	chr8	-	917	2	FSM	ENSG00000253982.3	ENST00000517959.1	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCCTTGTTCATTCCTG	323	False	NA	NA	False	NA	NA	NA	1764502	1762080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_1762929_1764433
transcript_89189.known	chr8	+	780	7	FSM	ENSG00000036448.10	ENST00000612167.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.7950549357115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATGGCCCCGCCCCAG	8625	False	NA	NA	False	NA	NA	NA	2127734	2144910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_2127882_2129126_2129233_2140722_2140887_2141140_2141178_2142374_2142398_2143400_2143457_2144663
transcript_89190.known	chr8	+	614	6	FSM	ENSG00000036448.10	ENST00000621894.4	614	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.85472369909914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAAGTATGGCGGGGA	11	True	NA	NA	False	NA	NA	NA	2127796	2144843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_2127882_2129126_2129233_2140722_2140887_2142374_2142398_2143400_2143457_2144663
transcript_89194.known	chr8	+	8008	14	FSM	ENSG00000147316.15	ENST00000344683.10	8008	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	42.0102833283167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTCTCACTCTGGAA	-5	True	NA	NA	False	AATAAA	-27	NA	6406626	6648508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392_6445548_6455142_6455253_6477593_6477632_6480713_6480877_6499851_6499930_6621453_6621692_6642993
transcript_89197.known	chr8	+	3773	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	20.6318556942354	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTGTTGCTGTTGT	614	False	NA	23	True	AATAAA	-31	NA	6406591	6447419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
transcript_8920.known	chr1	+	1844	4	FSM	ENSG00000198860.14	ENST00000423085.7	1844	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	169.723304233685	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	-4	True	NA	17	True	AATAAA	-19	NA	184051650	184074212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072826
transcript_89204.known	chr8	-	2413	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGATTTTGGAG	6	True	NA	NA	False	AATAAA	-25	NA	6406548	6403550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6405121_6405705
transcript_89205.nnic	chr8	-	1045	2	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	NA	False	NA	-16	True	AATAAA	-15	NA	6407160	6405405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_6406372_6407081
transcript_89206.known	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	12	True	NA	-16	True	AATAAA	-15	NA	6406542	6405405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6405400_6406500
transcript_89207.known	chr8	-	5268	9	FSM	ENSG00000091879.14	ENST00000629816.3	5268	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.1224989991992	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCATTATTCTCATG	1	True	NA	NA	False	AATAAA	-37	NA	6563245	6499631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6503262_6508931_6509063_6513677_6513845_6514676_6514779_6519863_6519992_6521177_6521411_6527554_6527677_6532331_6532488_6562646
transcript_8921.known	chr1	+	2219	4	FSM	ENSG00000198860.14	ENST00000643231.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	150.869332720588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAAACCGACTTCTTT	0	True	NA	NA	False	NA	NA	NA	184051685	184097485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095689
transcript_89211.known	chr8	-	1198	3	FSM	ENSG00000249898.9	ENST00000527490.2	1198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGGCGGAGGCTA	-16	True	NA	NA	False	AAAACA	-45	NA	6708224	6627021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6627311_6634594_6635420_6708140
transcript_89213.known	chr8	+	5237	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_7	59.7805510656625	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	-10	True	NA	16	True	AATAAA	-22	NA	6708641	6761503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_89219.known	chr8	-	4773	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	4.87909372276815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTGAGCACCTATCA	-11	True	NA	NA	False	AATAAA	-20	NA	6835524	6808516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
transcript_8922.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000645963.2	609	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	193.532297046255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	27	True	NA	11	True	AATAAA	-18	NA	184051755	184095845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184093624_184093725_184095689
transcript_89223.nnic	chr8	-	2339	6	NIC	ENSG00000275591.5	novel	4773	7	NA	NA	-14	-2238	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	7.74596669241483	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGTAAGATAATTTG	NA	False	NA	-14	True	AATATA	-25	NA	6835538	6810754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_6812340_6815806_6815919_6821868_6822039_6825164_6825350_6832716_6832901_6835435
transcript_89230.known	chr8	-	375	2	FSM	ENSG00000164825.4	ENST00000297439.4	375	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTTGGGCCAAAATGA	0	True	NA	NA	False	AATAAA	-23	NA	6877936	6870591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_6870827_6877796
transcript_89232.nnic	chr8	-	679	2	Genic_Genomic	ENSG00000284614.1	novel	218	1	NA	NA	-134	6189	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTGTAAAGAGAATG	NA	False	NA	NA	False	AATAAA	-41	NA	7222064	7215523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr8_-_7215851_7221712
transcript_89234.known	chr8	-	1587	4	FSM	ENSG00000255378.1	ENST00000528972.1	1587	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTGACTGCTGTGCT	NA	False	NA	NA	False	AATAAA	-21	NA	7781413	7778590	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_7779794_7780021_7780090_7780334_7780397_7781159
transcript_89237.nnic	chr8	+	822	3	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-149	-108528	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	6119	False	NA	NA	False	AATAAA	-19	NA	8065496	8071999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_8065817_8070775_8070973_8071694
transcript_89239.nnic	chr8	+	616	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-140	-108528	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	6128	False	NA	NA	False	AATAAA	-19	NA	8065505	8071999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_8065817_8071694
transcript_89249.nnic	chr8	+	746	3	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGCTTGATTTTTA	29	False	NA	NA	False	AATACA	-16	NA	8892260	8927354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr8_+_8892582_8903495_8903557_8926990
transcript_8925.nnic	chr1	+	638	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-65	-182	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	194.797330577192	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCGAACTTTCTTTG	-4	True	NA	2	True	AATGAA	-38	NA	184386963	184619754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_89251.known	chr8	-	6399	3	FSM	ENSG00000147324.11	ENST00000276282.7	6399	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	12.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTATTCCCAGAACTT	-27	True	NA	-29	True	AATAAA	-21	NA	8893630	8783353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_8786056_8797364_8797492_8890060
transcript_89255.nnic	chr8	+	428	3	NIC	ENSG00000104626.15	novel	392	3	NA	NA	12890	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCGTGTTGTACA	25	False	NA	10	True	AATAAA	-23	NA	9062707	9100099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_9062785_9088459_9088570_9099858
transcript_89256.nnic	chr8	+	436	3	NIC	ENSG00000104626.15	novel	392	3	NA	NA	12890	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	2	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCGTGTTGTACA	25	False	NA	10	True	AATAAA	-23	NA	9062707	9100099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_9062785_9096742_9096861_9099858
transcript_89257.known	chr8	-	5510	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGTCCTTCTATTC	2	True	NA	NA	False	AATAAA	-17	NA	9150658	9136254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9141669_9150562
transcript_8926.nnic	chr1	+	1278	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-133	390	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	194.797330577192	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTTCTCCCATTCA	NA	False	NA	15	True	AATAAA	-21	NA	184386895	184620326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_89265.known	chr8	-	3001	3	FSM	ENSG00000253230.10	ENST00000519461.2	3001	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	45.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	4887	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9900287_9900544_9900613_9900688
transcript_89266.known	chr8	-	3111	3	FSM	ENSG00000253230.10	ENST00000667251.1	3111	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGGACTTCAAACG	4887	False	NA	NA	False	AAGAAA	-39	NA	9903398	9899943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_9900287_9900554_9900613_9900688
transcript_89269.known	chr8	+	1512	6	FSM	ENSG00000175806.15	ENST00000317173.9	1512	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.06630035524124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGACATCTCCTCTGT	-24	True	NA	NA	False	AATAAA	-24	NA	10054291	10428891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_10054659_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_8927.known	chr1	+	10293	6	FSM	ENSG00000116667.15	ENST00000235307.7	10293	6	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	35.8139637571716	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGCTTTGTTCTCTTT	14	True	NA	10	True	ATTAAA	-16	NA	184387028	184629019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_184387369_184477385_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_89271.nnic	chr8	+	766	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1333	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7054733592095	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAATGCTTGTGTGAT	3099	False	NA	NA	False	AGTAAA	-16	NA	10057636	10428365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_89272.nnic	chr8	+	1286	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1333	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7054733592095	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACTGCCTGACATCTC	3099	False	NA	NA	False	AATAAA	-18	NA	10057636	10428885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_89277.known	chr8	-	1546	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	30.6865877325366	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	7	True	NA	-6	True	ATTAAA	-17	NA	10839875	10764960	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_89280.known	chr8	-	1272	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	72.1470720126604	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCAGCAAGAGAGTTT	6	True	NA	-8	True	AATAAA	-19	NA	10839876	10765158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_89291.nnic	chr8	-	349	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	557	-86	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	14.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	1589	False	NA	-10	True	ATTAAA	-21	NA	11200277	11111730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_11111893_11114020_11114093_11200162
transcript_89292.known	chr8	+	3503	11	FSM	ENSG00000104643.10	ENST00000530200.1	3503	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	53.7155470976513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACAGCCTCACTTTTT	-2	True	NA	NA	False	NA	NA	NA	11284826	11324527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11285071_11295193_11295303_11297899_11297952_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_89295.known	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	14.0773875241883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	-13	True	NA	20	True	AATAAA	-33	NA	11284815	11328146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_89300.known	chr8	+	1421	8	FSM	ENSG00000154316.16	ENST00000534302.5	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16653584115759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	NA	False	NA	NA	False	ATTAAA	-17	NA	11347644	11366088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11361634_11361808_11364719_11364990_11365582
transcript_89302.known	chr8	-	4067	3	FSM	ENSG00000154319.16	ENST00000284486.9	4067	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAAAATGCTTGTCC	-3	True	NA	-13	True	AATAAA	-37	NA	11466753	11421475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11424637_11444030_11444809_11466625
transcript_89303.known	chr8	+	2415	3	FSM	ENSG00000286985.2	ENST00000682432.1	2415	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATCTACCGACAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	11633097	11649333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11633328_11643331_11643520_11647336
transcript_89308.nic	chr8	+	2356	6	NIC	ENSG00000136574.19	novel	3419	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	164.705069745895	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGTCCCTTAGTGGTC	-19	True	NA	27	True	AATAAA	-19	NA	11704189	11760000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_11704305_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_89309.known	chr8	+	3414	7	FSM	ENSG00000136574.19	ENST00000335135.8	3414	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	42.2035411889676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTCCCTTAGTGGTCTT	-5	True	NA	29	True	AATAAA	-21	NA	11704203	11760002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11704305_11707855_11708929_11748918_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_89310.known	chr8	+	2323	6	FSM	ENSG00000154328.16	ENST00000455213.6	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	63.8172390502754	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	-39	True	NA	12	True	AATAAA	-12	NA	11769698	11787340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11769792_11770173_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_89311.known	chr8	+	2226	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	47.1274866717927	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	NA	False	NA	17	True	AATAAA	-17	NA	11769638	11787345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_89313.known	chr8	+	2699	5	FSM	ENSG00000154328.16	ENST00000284503.7	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	33.8045854877707	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	-28	True	NA	17	True	AATAAA	-17	NA	11769709	11787345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_89316.known	chr8	+	1773	9	FSM	ENSG00000079459.13	ENST00000525607.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	1322.69818930851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	-17	True	NA	-97	True	NA	NA	NA	11802740	11838839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_89320.known	chr8	+	2035	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	2415	junction_3	304.397766089043	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTACAGTTCGCT	-17	True	NA	14	True	AATAAA	-19	NA	11802740	11839298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_89324.known	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1025.20908768377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	8	True	NA	-31	True	NA	NA	NA	11802765	11838905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_8933.known	chr1	-	2260	2	FSM	ENSG00000285847.2	ENST00000653410.1	2260	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAATTATAATGTTCAT	NA	False	NA	NA	False	AATGAA	-36	NA	184672166	184663024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_184665147_184672028
transcript_89337.known	chr8	+	1393	7	FSM	ENSG00000079459.13	ENST00000443614.6	1393	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	1160.93166609122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGTGCCTCATCCCA	-19	True	NA	NA	False	NA	NA	NA	11802738	11838783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_8934.known	chr1	-	6884	14	FSM	ENSG00000135842.17	ENST00000367511.4	6884	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.04423890673421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACCAGATGTCATTT	-12	True	NA	-6	True	AATAAA	-16	NA	184974508	184791031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_184796098_184798078_184798191_184803584_184803693_184805945_184806057_184808073_184808236_184818637_184818826_184823166_184823330_184823637_184823743_184831846_184831963_184884632_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
transcript_89356.known	chr8	+	932	6	FSM	ENSG00000079459.13	ENST00000529464.5	932	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	1235.38874853222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCGGAAAGGGCAAGCA	-12	True	NA	NA	False	NA	NA	NA	11802745	11831581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517
transcript_89358.known	chr8	+	1558	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	1328.57084869419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	5	False	NA	-74	True	TTTAAA	-29	NA	11802642	11839210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
transcript_8937.nic	chr1	-	1161	5	ISM	ENSG00000135842.17	ENST00000367511.4	6884	14	0	93193	0	3514	5prime_fragment	FALSE	canonical	3	38	junction_1	3.08220700148449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGCCACAGAT	-12	True	NA	NA	False	NA	NA	NA	184974508	184884224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
transcript_89370.known	chr8	+	642	2	FSM	ENSG00000079459.13	ENST00000527045.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTTGTCCCCAGTA	26	True	NA	6	True	AATAAA	-3	NA	11802783	11803815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_11802932_11803321
transcript_89374.known	chr8	-	2432	11	FSM	ENSG00000164733.22	ENST00000530640.7	2432	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	167.503462650776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCACTCCAGCCTCG	0	True	NA	NA	False	NA	NA	NA	11868112	11843009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11844242_11845081_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_89375.known	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	214.834378068316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	NA	False	NA	-39	True	NA	NA	NA	11868137	11842559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
transcript_89376.known	chr8	-	3733	10	FSM	ENSG00000164733.22	ENST00000353047.11	3733	10	0	0	0	0	multi-exon	TRUE	canonical	3	515	junction_6	31.7867120307904	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGATTCATTCCATG	1	True	NA	-3	True	AATAAA	-19	NA	11868087	11842523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_89377.known	chr8	-	1957	10	FSM	ENSG00000164733.22	ENST00000453527.7	1957	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	174.966734051623	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGATGGGATCTCAGATC	12	False	NA	-5	True	AATAAA	-24	NA	11868103	11844312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_11845223_11845660_11845787_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_89389.nnic	chr8	-	2078	7	NNC	ENSG00000186523.15	novel	2403	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.4253408071038	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	NA	False	NA	NA	False	AATAAA	-21	NA	12194127	12182105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_12183102_12183205_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_89391.known	chr8	-	2096	7	FSM	ENSG00000186523.15	ENST00000448228.7	2403	7	-38	345	7	105	multi-exon	FALSE	canonical	2	11	junction_2	25.9935889531759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAACCCCCCTCACT	NA	False	NA	NA	False	NA	NA	NA	12194120	12182450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_12183707_12185375_12185526_12186351_12186618_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_89396.known	chr8	-	2145	6	FSM	ENSG00000186523.15	ENST00000340537.9	2145	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	17.9064234284795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACAGATGATCTGTGG	NA	False	NA	NA	False	AATAAA	-29	NA	12194082	12182097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_89399.nnic	chr8	-	1940	5	NNC	ENSG00000186523.15	novel	2403	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.0591644679701	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	NA	False	NA	NA	False	AATAAA	-21	NA	12194133	12182105	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_12183102_12183205_12183707_12185375_12185526_12186699_12186834_12193974
transcript_8940.known	chr1	+	3407	7	FSM	ENSG00000121481.11	ENST00000367510.8	3407	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	38.3525314244923	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGCAACCTCTATTCT	16	True	NA	9	True	ATTAAA	-25	NA	185045557	185102603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185093060_185093277_185098071_185098345_185099790_185099963_185100199
transcript_89412.known	chr8	-	1014	6	FSM	ENSG00000283674.3	ENST00000636622.1	1014	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	80.3905467079308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	1857	False	NA	NA	False	AATAAA	-26	NA	12605726	12594984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_12595297_12601157_12601399_12601786_12601855_12604930_12605108_12605391_12605476_12605594
transcript_89413.nic	chr8	-	988	4	Fusion	ENSG00000284663.1_ENSG00000283674.3	novel	1014	6	NA	NA	3	0	multi-exon	FALSE	canonical	3	82	junction_3	56.4052795007307	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	NA	False	NA	NA	False	AATAAA	-26	NA	12607657	12594984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr8_-_12595297_12601157_12601399_12601786_12601855_12607290
transcript_89423.nic	chr8	-	650	2	ISM	ENSG00000283674.3	ENST00000636622.1	1014	6	4231	0	4231	0	3prime_fragment	FALSE	canonical	3	205	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	-4	True	NA	NA	False	AATAAA	-26	NA	12601495	12594984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_12595297_12601157
transcript_89424.nnic	chr8	-	1225	2	NNC	ENSG00000283674.3	novel	4514	6	NA	NA	5	-11308	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCAGTT	NA	False	NA	NA	False	NA	NA	NA	12607655	12606292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_12607153_12607290
transcript_89425.nnic	chr8	+	1764	5	Genic_Genomic	ENSG00000270154.1	novel	661	1	NA	NA	-39282	-2	multi-exon	FALSE	canonical	2	4	junction_4	26.1963737948595	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGTGTCATCAATTTG	NA	False	NA	1	True	ATTAAA	-14	NA	12437179	12477120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr8_+_12437711_12438163_12438512_12440968_12441062_12444755_12444895_12476467
transcript_89428.known	chr8	+	1420	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGCTCTGACTTGTGCG	-13	True	NA	10	True	AATAAA	-22	NA	13566868	13568288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_13566900_13568300
transcript_89434.known	chr8	+	1203	10	FSM	ENSG00000104723.21	ENST00000511783.2	1203	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_9	122.702691972442	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAACTTACTGAAAACT	NA	False	NA	16	True	AATAAA	-19	NA	15623079	15758277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757860_15758033
transcript_89437.nnic	chr8	-	2217	3	NNC	ENSG00000253496.3	novel	1237	9	NA	NA	87176	23674	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGAAACAACTAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	16827868	16653230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_16655139_16676916_16677075_16827717
transcript_89439.known	chr8	-	1840	3	FSM	ENSG00000078579.9	ENST00000180166.6	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTTGGCTTCATTGC	-6	True	NA	NA	False	ATTAAA	-39	NA	17002345	16992180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_16993318_16995654_16995759_17001746
transcript_8944.known	chr1	+	1677	6	FSM	ENSG00000121481.11	ENST00000367509.8	1677	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	130.341704760986	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGAGAGTGCTTTTTT	-16	True	NA	21	True	ATTAAA	-29	NA	185045525	185101057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185098071_185098345_185099790_185099963_185100199
transcript_89440.known	chr8	+	5924	13	FSM	ENSG00000104219.13	ENST00000262096.13	5924	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.9871642927574	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAGCTGAATACT	-23	True	NA	14	True	AATGAA	-16	NA	17156481	17224799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255
transcript_89452.known	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	TRUE	canonical	3	1101	junction_1	112.242916133813	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	9	True	NA	NA	False	AATAAA	-18	NA	17246857	17224965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_89464.known	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_3	114.621114983235	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-12	True	NA	-67	True	ATTAAA	-17	NA	17246878	17231569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_8947.known	chr1	+	3838	19	FSM	ENSG00000116668.13	ENST00000367500.9	3838	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	11.6052616844874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTAGTTGGTGTAGA	-2	True	NA	105	True	AATAAA	-18	NA	185157166	185291781	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_185157315_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
transcript_89472.known	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.34734496952147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	10	True	NA	-17	True	AATAAA	-19	NA	17413351	17296793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_89475.known	chr8	-	506	2	FSM	ENSG00000003987.14	ENST00000521177.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGGAATGTGTGTTTG	7	True	NA	NA	False	NA	NA	NA	17413528	17372994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17373241_17413268
transcript_89476.known	chr8	-	2158	13	FSM	ENSG00000003987.14	ENST00000521857.5	2158	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	3.66192875711997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTCCAATGGTACTA	-8	True	NA	NA	False	AATAAA	-22	NA	17413327	17301650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_89480.known	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	23.3138840625633	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	1	True	NA	12	True	AATAAA	-22	NA	17246957	17298024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_89488.known	chr8	+	1307	11	FSM	ENSG00000155975.10	ENST00000521829.5	1307	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	97.145046193823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAAACTGGCATT	84	False	NA	NA	False	NA	NA	NA	17247122	17295052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17247370_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_89493.known	chr8	+	1508	6	FSM	ENSG00000104213.13	ENST00000251630.11	1508	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	3.37045990927054	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACTTAAAATACATCCA	-2	True	NA	32	True	AATAAA	-28	NA	17577215	17643144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17577308_17589467_17589766_17621050_17621203_17628486_17628781_17634073_17634214_17642612
transcript_89500.nic	chr8	+	2660	16	NIC	ENSG00000078674.19	novel	2536	15	NA	NA	-3	268	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	55.6139071336178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAAAGAAACTGA	-3	True	NA	NA	False	AAAACA	-7	NA	17922984	17960371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314
transcript_89501.nic	chr8	+	2546	15	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-46	67432	-6	268	5prime_fragment	FALSE	canonical	3	140	junction_6	32.879573089239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAAAGAAACTGA	-6	True	NA	NA	False	AAAACA	-7	NA	17922981	17960371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314
transcript_89505.nic	chr8	+	1875	10	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-253	2832	-222	0	5prime_fragment	FALSE	canonical	3	77	junction_7	67.1782225147921	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	NA	False	NA	NA	False	AAGAAA	-5	NA	17922745	17953123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969
transcript_89507.nic	chr8	+	1758	9	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-282	74680	-222	0	5prime_fragment	FALSE	canonical	3	140	junction_6	40.6355755465577	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	NA	False	NA	NA	False	AAGAAA	-5	NA	17922745	17953123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_89508.nic	chr8	+	2835	9	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-40	73361	0	1319	5prime_fragment	FALSE	canonical	3	140	junction_6	40.6355755465577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAACAACTTA	0	True	NA	NA	False	NA	NA	NA	17922987	17954442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_8951.nnic	chr1	+	1082	4	NNC	ENSG00000116668.13	novel	3001	19	NA	NA	99853	-286	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.6684210040363	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGCAGTGACTGATG	NA	False	NA	15	True	AATAAA	-15	NA	185257334	185291495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_185257463_185271322_185271390_185276603_185276669_185290673
transcript_89511.known	chr8	+	1426	8	FSM	ENSG00000078674.19	ENST00000523055.5	1426	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	85.3312871778492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	22	False	NA	NA	False	AAGAAA	-5	NA	17923009	17953123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17923189_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_89512.known	chr8	+	710	5	FSM	ENSG00000078674.19	ENST00000518936.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	108.527358301951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAGGCAGAATTAGAGA	18	False	NA	NA	False	NA	NA	NA	17923005	17937321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17923189_17924712_17924781_17934705_17934859_17935588_17935707_17937133
transcript_89513.nic	chr8	+	668	4	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-253	18783	-222	-149	5prime_fragment	FALSE	canonical	3	184	junction_2	25.3683967872539	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAATAAGAAAAAGTT	NA	False	NA	NA	False	AATAGA	-7	NA	17922745	17937172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133
transcript_89515.known	chr8	+	6820	39	FSM	ENSG00000078674.19	ENST00000325083.13	8652	39	-148	1980	-128	-7	multi-exon	TRUE	canonical	3	125	junction_24	84.2035564549835	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATCTTTTTTGGAAA	-12	True	NA	NA	False	AATAAA	-16	NA	17922839	18027968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
transcript_89517.known	chr8	-	1940	14	FSM	ENSG00000104763.20	ENST00000636033.1	1940	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	306.418729632871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGAAGTGTTCCCTTT	25	True	NA	NA	False	NA	NA	NA	18084074	18056879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083898
transcript_89518.known	chr8	-	1989	14	FSM	ENSG00000104763.20	ENST00000636920.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	306.418729632871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAGGAAGTTGCTAAC	-21	True	NA	NA	False	NA	NA	NA	18084120	18056834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083940
transcript_89519.known	chr8	-	3151	14	FSM	ENSG00000104763.20	ENST00000637244.1	3151	14	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_7	303.289519344765	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTTCCTGACACTCA	-23	True	NA	-77	True	NA	NA	NA	18084980	18056492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_8952.nnic	chr1	+	1275	4	NNC	ENSG00000116668.13	novel	3001	19	NA	NA	99853	-93	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.6684210040363	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTTTTTACTTCCA	NA	False	NA	12	True	AATAAA	-18	NA	185257334	185291688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_185257463_185271322_185271390_185276603_185276669_185290673
transcript_89520.known	chr8	-	2512	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	304.389796032972	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCAGTCAGCAGTCAT	NA	False	NA	-39	True	AATAAA	-14	NA	18084998	18056454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_89522.known	chr8	-	1975	13	FSM	ENSG00000104763.20	ENST00000636494.1	1975	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_11	273.542653590502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGTAGCATTCATGTA	-27	True	NA	NA	False	TTTAAA	-4	NA	18084126	18056723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18075540_18075588_18083980
transcript_89523.known	chr8	-	1774	13	FSM	ENSG00000104763.20	ENST00000636997.1	1774	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	307.80535877221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAAAGCAATCTTTTAT	-1	True	NA	NA	False	NA	NA	NA	18084100	18056902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18071299_18071391_18075540_18075588_18083980
transcript_89524.known	chr8	-	2245	13	FSM	ENSG00000104763.20	ENST00000520781.6	2245	13	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_8	345.257261167508	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTCAGCAGTCATGCA	-9	True	NA	-36	True	AATAAA	-17	NA	18084108	18056451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_89526.nnic	chr8	-	897	6	NNC	ENSG00000104763.20	novel	929	5	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	1	23	junction_1	416.57105036236	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	812	False	NA	-5	True	AATAAA	-24	NA	18084145	18066762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_18067105_18067133_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_89528.nnic	chr8	-	754	6	NNC	ENSG00000104763.20	novel	4611	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_1	416.57105036236	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGTCCTGTGTGATTT	-27	True	NA	-24	True	TATAAA	-16	NA	18084126	18066886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_18067105_18067133_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_8953.known	chr1	-	3657	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	493.903346370072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTCTAATGTGTAG	-1	True	NA	-6	True	GATAAA	-15	NA	185317273	185297014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_89531.known	chr8	-	929	5	FSM	ENSG00000104763.20	ENST00000637561.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	87.2267160908858	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	809	False	NA	-5	True	AATAAA	-24	NA	18084148	18066762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_89532.known	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	451.596335237566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	26	True	NA	-5	True	AATAAA	-24	NA	18084073	18066762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_89534.known	chr8	+	451	4	FSM	ENSG00000245281.8	ENST00000505114.6	451	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTTGTAAAATAAATGC	446	False	NA	NA	False	AATAAA	-21	NA	18084867	18088211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18084940_18086882_18086937_18087024_18087138_18087999
transcript_89535.known	chr8	-	1634	4	FSM	ENSG00000104763.20	ENST00000637202.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	482.108563154262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACAATGTGTA	22	True	NA	NA	False	TATAAA	-37	NA	18084077	18065895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18067299_18069791_18069879_18075540_18075588_18083980
transcript_89536.known	chr8	-	2328	14	FSM	ENSG00000104763.20	ENST00000636160.1	2328	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	293.836910849394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAACAGTCACTGGA	-21	True	NA	-61	True	NA	NA	NA	18084120	18056476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071412_18075540_18075588_18083980
transcript_89539.known	chr8	+	2162	4	FSM	ENSG00000171428.15	ENST00000518029.5	2162	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	16	False	NA	NA	False	AATAAA	-31	NA	18210129	18223689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18210181_18212390_18212775_18219410_18219490_18222041
transcript_89541.known	chr8	+	1799	3	FSM	ENSG00000171428.15	ENST00000307719.9	1799	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	-5	True	NA	NA	False	AATAAA	-31	NA	18210108	18223689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18210181_18219410_18219490_18222041
transcript_89545.known	chr8	+	1285	2	FSM	ENSG00000156006.5	ENST00000286479.4	1285	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTCTCTAAAGTTTA	-4	True	NA	10	True	AATAAA	-17	NA	18391281	18401218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_18391346_18399997
transcript_89546.known	chr8	+	1984	10	FSM	ENSG00000104611.12	ENST00000519207.5	1984	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	12.737618049708	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTGTACTTGAAAACG	15	False	NA	NA	False	AATAAA	-31	NA	19313975	19394953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_89555.known	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_15	39.9029584586156	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	-15	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
transcript_89561.nic	chr8	+	978	7	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	4	27999	4	-424	5prime_fragment	FALSE	canonical	3	319	junction_3	34.1601619824419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTATTGATTCTTTTGG	-11	True	NA	20	True	AATAAA	-17	NA	19817419	19824068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872
transcript_89562.known	chr8	+	3565	10	FSM	ENSG00000175445.17	ENST00000650287.1	3565	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	4.49691252107735	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATTATTTTGTATC	-2	True	NA	10	True	AATAAA	-24	NA	19939252	19967259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_19939529_19948179_19948341_19951768_19951949_19953309_19953422_19954119_19954354_19955840_19956084_19959259_19959381_19960900_19961084_19962114_19962220_19965309
transcript_89566.known	chr8	+	2856	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_8	77.7764205761176	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGACTCTCTATCTT	-6	True	NA	20	True	AATAAA	-23	NA	20197380	20221696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
transcript_89567.known	chr8	+	670	6	FSM	ENSG00000147416.11	ENST00000519667.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	3	1077	junction_4	60.6728934533371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGTGTTATTGTTTGT	52	False	NA	NA	False	AATAAA	-17	NA	20197438	20211415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176
transcript_89568.known	chr8	+	4870	28	FSM	ENSG00000130227.17	ENST00000252512.14	4870	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.3505825769215	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	-18	True	NA	35	True	AATAAA	-20	NA	21919661	22006585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_21974669_21974775_21976355_21976522_21977769_21977844_21980083_21980204_21981730_21981878_21982639_21982813_21984645_21984840_21985585_21985692_21987140_21987277_21987783_21987858_21989002_21989084_21990343_21990408_21990810_21990920_21991867_21991975_21994362_21994452_21995491_21995600_21998754_21998838_21999090_21999306_21999535_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_8957.known	chr1	-	4113	15	FSM	ENSG00000116679.16	ENST00000367498.8	4113	15	0	0	0	0	multi-exon	TRUE	canonical	3	1367	junction_8	93.6382531286204	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAGATCACTTCTCAT	-1	True	NA	-12	True	AATAAA	-28	NA	185317243	185296387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_89573.known	chr8	+	1874	9	FSM	ENSG00000158806.14	ENST00000397940.5	1874	9	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	3.37036719067819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTTCTCTTCCCTGG	-1	True	NA	NA	False	AATAAA	-15	NA	22024133	22036896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22024624_22024723_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_89576.known	chr8	+	497	4	FSM	ENSG00000158806.14	ENST00000520456.5	497	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	9335	False	NA	NA	False	AATAAA	-16	NA	22034107	22036897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22034276_22034509_22034545_22036492_22036527_22036637
transcript_89578.known	chr8	+	1320	5	FSM	ENSG00000158815.11	ENST00000359441.4	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	104.564274491817	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTATCTGAAGCGGGGC	-2	True	NA	26	True	AATAAA	-17	NA	22042819	22048809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22042964_22043144_22043182_22046113_22046292_22046526_22046634_22047955
transcript_89579.known	chr8	+	1706	5	FSM	ENSG00000158815.11	ENST00000518533.5	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	148.137393996249	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTTATCTGAAGCGG	9	False	NA	23	True	AATAAA	-14	NA	22042397	22048806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22042964_22043144_22043182_22046146_22046292_22046526_22046634_22047955
transcript_89583.nnic	chr8	-	1485	9	NNC	ENSG00000168476.12	novel	1666	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	86.9186940479434	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-6	True	NA	-19	True	AATAAA	-14	NA	22141951	22138019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450_22141660_22141884
transcript_89584.known	chr8	+	3593	20	FSM	ENSG00000168487.20	ENST00000306385.10	3593	20	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_11	3.76232968434979	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGCCAGATGCTGT	-13	True	NA	9	True	AATAAA	-20	NA	22165371	22212326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201802_22201929_22206853_22206982_22207302_22207517_22209444_22209696_22211593
transcript_89586.known	chr8	-	3099	6	FSM	ENSG00000168490.14	ENST00000321613.7	3099	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	7.63151361133557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGCTGCTGTAACAAA	267	False	22232121	-5	True	AATAAA	-36	NA	22232101	22219703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22228787_22228910_22231795
transcript_89588.known	chr8	-	2976	5	FSM	ENSG00000168490.14	ENST00000454243.7	2976	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.58257569495584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCTGCTGTAACAAAA	269	False	22232121	-4	True	AATAAA	-37	NA	22232099	22219702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
transcript_89589.nic	chr8	+	1580	6	ISM	ENSG00000168495.13	ENST00000397802.8	5494	8	2679	3433	693	271	3prime_fragment	FALSE	canonical	3	230	junction_2	15.8543369460851	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTCTATTTTCAAACA	2504	False	NA	26	True	AATAAA	-22	NA	22247913	22251167	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
transcript_89590.nnic	chr8	+	2702	21	NNC	ENSG00000197181.12	novel	3488	22	NA	NA	-2	-33503	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_20	6.35295206970744	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGTTTTTTTTTTTG	-7	True	NA	9	True	AATAAA	-15	NA	22275313	22322013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22321845
transcript_89591.known	chr8	+	3488	22	FSM	ENSG00000197181.12	ENST00000521356.5	3488	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	7.40594845798688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	-12	True	NA	NA	False	NA	NA	NA	22275336	22356071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22352958_22353213_22355348
transcript_89592.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000381237.6	4663	9	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_8	153.775810841628	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	10	True	NA	18	True	AATAAA	-26	NA	22367277	22422736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_89597.known	chr8	+	599	4	FSM	ENSG00000120913.24	ENST00000614502.4	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_3	32.8734948958377	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACAATGGTGGGCAGT	-18	True	NA	NA	False	NA	NA	NA	22589281	22593974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
transcript_89599.known	chr8	+	701	3	FSM	ENSG00000120913.24	ENST00000443561.3	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	117	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGTGGGAAGGAGAG	-17	True	NA	-88	True	NA	NA	NA	22589282	22594195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22589375_22589595_22589742_22593732
transcript_896.known	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	25.8018289080445	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	10	True	NA	-4	True	AATAAA	-14	NA	15524215	15491400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
transcript_8960.nic	chr1	-	2894	8	NIC	ENSG00000116679.16	novel	3657	16	NA	NA	-33	1761	intron_retention	FALSE	canonical	3	149	junction_1	485.484441416141	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGAGTTACTTTGCCT	544	False	NA	-1	True	ATTAAA	-22	NA	185317306	185304988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_89601.known	chr8	+	1491	10	FSM	ENSG00000120913.24	ENST00000397761.6	1491	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	130.118749182771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTATAAATATATGAATA	7	False	NA	-18	True	GGGGCT	-35	NA	22579149	22594265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_89603.known	chr8	+	4853	21	FSM	ENSG00000158941.17	ENST00000308511.9	3685	21	-125	-1043	-125	550	multi-exon	FALSE	canonical	3	848	junction_6	83.9858767888983	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGATGGGACAGGTCTC	2823	False	NA	NA	False	NA	NA	NA	22604631	22621514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_22604843_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_89608.known	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_6	14.8492424049175	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-7	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
transcript_89609.nic	chr8	-	1493	8	NIC	ENSG00000147439.14	novel	1836	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	60.7853365776413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	-20	True	NA	17	True	AGTAAA	-19	NA	22669134	22620711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636921_22636963_22644754_22644804_22669043
transcript_89610.known	chr8	-	1431	7	FSM	ENSG00000147439.14	ENST00000519513.5	1431	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.4662188085371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	1	True	NA	17	True	AGTAAA	-19	NA	22669113	22620711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22644754_22644804_22669043
transcript_89612.known	chr8	-	1723	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	53.9851374151108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGACTTCACTTGATAC	6	True	NA	-16	True	NA	NA	NA	23069021	23022310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_89614.known	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	27.6043474836845	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-4	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_89616.known	chr8	+	1395	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGTGTGTTGGTTTTT	-1	True	NA	NA	False	NA	NA	NA	23102920	23117445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
transcript_89619.known	chr8	+	1242	4	FSM	ENSG00000284948.1	ENST00000397703.6	1242	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCCTTGGAGATCGGT	6329	False	NA	13	True	AATAAA	-27	NA	23084354	23103558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23102696
transcript_89620.known	chr8	-	3535	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	16.3152535990097	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGTTCGTTTATTT	1	True	NA	NA	False	AATAAA	-22	NA	23164027	23135587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
transcript_89621.known	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.36597393430856	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	3	True	NA	NA	False	NA	NA	NA	23225102	23190451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
transcript_89622.nic	chr8	+	1718	4	NIC	ENSG00000246582.3	novel	1970	3	NA	NA	89	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	24.8506650928211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCATTTGGTTCTT	3484	False	NA	23	True	AATAAA	-34	NA	23224559	23230926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_23224892_23225804_23226124_23228065_23228154_23229947
transcript_89623.nnic	chr8	+	999	3	NNC	ENSG00000246582.3	novel	1970	3	NA	NA	-9	124	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	19	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCAAATGTTATTTTTT	-5	True	NA	NA	False	AATAAA	-24	NA	23225211	23228331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_23225626_23225804_23226124_23228065
transcript_89624.known	chr8	+	1970	3	FSM	ENSG00000246582.3	ENST00000500853.1	1970	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCATTTGGTTCTT	4	True	NA	23	True	AATAAA	-34	NA	23225220	23230926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23226124_23228065_23228154_23229947
transcript_89625.known	chr8	+	632	2	FSM	ENSG00000246582.3	ENST00000522600.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGAAATGGAGTGAGACA	417	False	NA	NA	False	AATAAA	-43	NA	23225633	23228207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23226124_23228065
transcript_89627.known	chr8	+	3367	10	FSM	ENSG00000147457.14	ENST00000313219.8	3367	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_8	14.3716112484489	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTCCTCTTTAGGT	2454	False	NA	17	True	ATTAAA	-18	NA	23246090	23261999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_89629.known	chr8	+	2639	10	FSM	ENSG00000147457.14	ENST00000517325.5	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	96.5617566094682	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	-3	True	NA	10	True	ATTAAA	-11	NA	23246641	23261992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23246825_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_8963.nic	chr1	-	2403	18	NIC	ENSG00000047410.14	novel	2478	18	NA	NA	-52	-1652	combination_of_known_junctions	FALSE	canonical	3	38	junction_17	69.9600973763866	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAAATGAAAAAATACA	-29	True	NA	NA	False	AAAAAG	-6	NA	186375745	186355522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
transcript_89633.known	chr8	+	1489	9	FSM	ENSG00000104679.12	ENST00000625275.3	1489	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	97.986526497269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGTCCCGACGTAGCT	NA	False	NA	NA	False	NA	NA	NA	23287907	23296121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23289926_23290051_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_89636.known	chr8	+	1573	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	42.3421438150827	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	4	True	NA	16	True	AATAAA	-23	NA	23288107	23296279	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_8964.nic	chr1	-	2489	17	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-134	1652	-134	-1652	5prime_fragment	FALSE	canonical	3	241	junction_11	32.7914218012882	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAAATGAAAAAATACA	257	False	NA	NA	False	AAAAAG	-6	NA	186375459	186355522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_89647.known	chr8	-	3721	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_7	12.4933118201975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGCATAGGAGTTGT	0	True	NA	NA	False	NA	NA	NA	23404120	23296896	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_89649.nnic	chr8	-	1392	6	NNC	ENSG00000134013.16	novel	975	4	NA	NA	-29	827	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	86.4513736154608	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATATTTTCCCTTGGTT	NA	False	NA	-6	True	ATTAAA	-20	NA	23404155	23330609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_23330751_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_89653.known	chr8	-	5803	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	47.810098886695	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGTAGACTGTGTGGG	-3	True	NA	-34	True	AATAAA	-20	NA	23457647	23429161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_89654.known	chr8	-	2063	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	37.9058592656421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCACAGCTCCACGA	4	True	NA	NA	False	NA	NA	NA	23457695	23432925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_89658.known	chr8	+	735	4	FSM	ENSG00000147454.14	ENST00000417331.6	735	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.5038719630109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCCAGTCCATCCAC	-16	True	NA	NA	False	NA	NA	NA	23528955	23571463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107_23566337_23568258_23568379_23571334
transcript_89659.known	chr8	+	4672	4	FSM	ENSG00000147454.14	ENST00000519973.6	4672	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	69.1391511534689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	-16	True	NA	22	True	AATAAA	-16	NA	23528955	23575463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334
transcript_89662.known	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	78.2574100147853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
transcript_89665.known	chr8	+	3404	3	FSM	ENSG00000147454.14	ENST00000518881.5	3404	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	65	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-5	True	NA	NA	False	AGTAAA	-16	NA	23528966	23572221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107_23568379_23571334
transcript_89666.known	chr8	+	3018	2	FSM	ENSG00000147454.14	ENST00000520654.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTAATTCTGGC	-1	True	NA	NA	False	NA	NA	NA	23529052	23568965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_23529213_23566107
transcript_89668.known	chr8	-	1748	4	FSM	ENSG00000159167.12	ENST00000524323.1	1748	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	255.045529704448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGAATGGAATAACTAT	496	False	NA	NA	False	NA	NA	NA	23854311	23843913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854045
transcript_89669.known	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_2	21.9241115365405	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	1	True	NA	-23	True	AATAAA	-14	NA	23854806	23841928	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
transcript_8967.known	chr1	-	9636	51	FSM	ENSG00000047410.14	ENST00000367478.9	9636	51	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_45	88.0265778046608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTGTAATTCTTTAA	8	True	NA	NA	False	AATAAA	-7	NA	186375253	186311651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_89675.nic	chr8	-	1158	3	ISM	ENSG00000159167.12	ENST00000290271.7	3868	4	-1	8990	-1	-7005	5prime_fragment	FALSE	canonical	3	520	junction_1	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCCCTCTGGTTAAA	0	True	NA	NA	False	ATTAAA	-14	NA	23854807	23850918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_23851532_23852241_23852385_23854405
transcript_89676.known	chr8	+	7019	23	FSM	ENSG00000042980.13	ENST00000265769.9	7019	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	3.76285674841481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCTGTAAAAAGATG	8	True	NA	NA	False	TATAAA	-13	NA	24294068	24359014	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_24294196_24299973_24300078_24309893_24309971_24310162_24310242_24311360_24311438_24313387_24313581_24320235_24320308_24321217_24321290_24323833_24324004_24326553_24326636_24329984_24330116_24331149_24331328_24332659_24332750_24335445_24335642_24339465_24339569_24341597_24341758_24343100_24343182_24343505_24343585_24349863_24349973_24351231_24351311_24351986_24352053_24353769_24353833_24354383
transcript_89679.known	chr8	+	2085	14	FSM	ENSG00000042980.13	ENST00000437154.6	2085	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	3.41593897094993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCTGGAAATGCAGAAA	-10	True	NA	NA	False	AAAAAG	-5	NA	24294110	24336120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_24294196_24299973_24300078_24309893_24309971_24310162_24310242_24311360_24311438_24313387_24313581_24320235_24320308_24321217_24321290_24323833_24324004_24326553_24326636_24329984_24330116_24331149_24331328_24332659_24332750_24335445
transcript_8968.nic	chr1	-	1267	10	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	42	6981	-30	-6981	5prime_fragment	FALSE	canonical	3	241	junction_4	33.1829943059862	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAAGAAATGCTTGAG	433	False	NA	NA	False	AATACA	-39	NA	186375283	186360851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_89682.known	chr8	+	3271	3	FSM	ENSG00000104722.14	ENST00000221166.10	3271	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	5.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	0	True	NA	12	True	AATAAA	-19	NA	24913760	24919093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_24914874_24915604_24915730_24917060
transcript_89690.known	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	7.31816613336672	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-1	True	NA	0	True	AATAAA	-18	NA	24956612	24950954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
transcript_89693.known	chr8	-	1760	3	FSM	ENSG00000147437.10	ENST00000276414.4	1760	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGGCATACCTGTTAA	477	False	NA	NA	False	AATAAA	-16	NA	25424654	25419261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_25419461_25421572_25421669_25423189
transcript_89696.known	chr8	-	3367	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_11	10.2908127203968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-11	True	NA	-4	True	ATTAAA	-20	NA	25458433	25427846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
transcript_89701.nic	chr8	-	3210	10	NIC	ENSG00000104756.16	novel	3367	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	17.7395422157589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-20	True	NA	-4	True	ATTAAA	-20	NA	25458442	25427846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25458198
transcript_89710.known	chr8	+	3486	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	16.8457891547086	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAACATTCTATTAA	-14	True	NA	25	True	AATAAA	-20	NA	25459232	25507911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_89714.nic	chr8	+	1955	14	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-27	4523	7	-4485	5prime_fragment	FALSE	canonical	3	220	junction_2	17.4240532923914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGAAAGGAAAGGGA	3	True	NA	NA	False	AAAAAG	-6	NA	25459205	25503388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372
transcript_89715.known	chr8	+	3565	14	FSM	ENSG00000184661.14	ENST00000380665.3	3565	14	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_8	14.8459545622336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	-4	True	NA	-13	True	AATAAA	-23	NA	25459198	25507873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_89717.nic	chr8	+	1867	13	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-27	19294	7	2782	5prime_fragment	FALSE	canonical	3	220	junction_2	17.5900461119982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATTAATAGGAG	3	True	NA	NA	False	AATACA	-19	NA	25459205	25488617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551
transcript_89719.nic	chr8	+	1532	2	ISM	ENSG00000184661.14	ENST00000380665.3	3565	14	-211	46588	-211	-786	5prime_fragment	FALSE	canonical	3	270	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACACAAACAGAAGAT	-13	True	NA	NA	False	NA	NA	NA	25458987	25461285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_25459474_25460239
transcript_8972.nnic	chr1	+	1746	15	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	54.1449773425806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTGTTTAGCCTGCT	-15	True	NA	12	True	ATTAAA	-13	NA	186375852	186419233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186411810_186411894_186417543_186417655_186419008
transcript_89722.nic	chr8	+	2444	11	NIC	ENSG00000221914.11	novel	3923	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	118.098094819519	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGTTTTCTTTTTCT	-13	True	NA	62	True	AATAAA	-17	NA	26291507	26371130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_26291827_26293665_26293741_26338889_26338988_26339902_26339974_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
transcript_89724.known	chr8	+	3923	10	FSM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	36.9126429543665	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTGTCAAGTTGCT	-13	True	NA	13	True	AATAAA	-19	NA	26291507	26372680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
transcript_89730.nic	chr8	+	2153	6	ISM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	10325	0	1270	5prime_fragment	FALSE	canonical	3	239	junction_2	16.8594187325661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCAGTTGTAGTGGTGT	-13	True	NA	NA	False	AATACA	-15	NA	26291507	26362355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973
transcript_89733.known	chr8	+	3452	6	FSM	ENSG00000104765.16	ENST00000380629.7	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_1	41.0297453075205	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCAGTATATCATTT	-17	True	NA	24	True	ATTAAA	-16	NA	26383053	26413127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_89736.known	chr8	+	875	6	FSM	ENSG00000104765.16	ENST00000523949.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	324.345864780176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTGTTAAAATTTG	41	False	NA	NA	False	AATAAA	-19	NA	26383196	26505636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26505306
transcript_89737.known	chr8	+	915	6	FSM	ENSG00000104765.16	ENST00000523515.5	915	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	326.604347797147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCTTTTCCGCAAATG	222	False	NA	NA	False	NA	NA	NA	26383377	26410666	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383479_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_89739.known	chr8	+	739	6	FSM	ENSG00000104765.16	ENST00000520409.5	739	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	326.604347797147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCACCCTGTTTTTACA	259	False	NA	NA	False	NA	NA	NA	26383414	26410509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26383497_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_8974.nnic	chr1	+	2817	15	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.3761004933836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	-37	True	NA	NA	False	AATAAA	-20	NA	186375830	186421375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008_186419078_186420087
transcript_89743.known	chr8	+	502	4	FSM	ENSG00000104765.16	ENST00000521254.1	502	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	360.000925924735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTACATATCCAATTC	4287	False	NA	NA	False	NA	NA	NA	26395616	26410519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26395709_26407999_26408104_26408226_26408377_26410363
transcript_89744.known	chr8	+	4603	14	FSM	ENSG00000092964.18	ENST00000311151.9	4603	14	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_5	63.1379629609944	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTGTATTGAGATGT	365	False	NA	21	True	AATAAA	-23	NA	26577842	26658178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_26578294_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
transcript_89745.nnic	chr8	+	4357	14	NNC	ENSG00000092964.18	novel	728	5	NA	NA	273	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	200.921398273115	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTGTCTGTATTGAGA	266	False	NA	18	True	AATAAA	-20	NA	26578677	26658175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_26578886_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
transcript_89746.known	chr8	-	4730	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTTTTTCTGTTTCC	1	True	NA	-21	True	AATAAA	-16	NA	26513872	26504700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_26509244_26509547_26509678_26513815
transcript_89747.known	chr8	-	4183	6	FSM	ENSG00000104228.13	ENST00000305364.9	4183	6	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_3	5.63560112144215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCCAATTTTTATTTA	-16	True	NA	-15	True	ACTAAA	-15	NA	27311272	27284885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27288128_27289161_27289281_27290155_27290179_27294079_27294311_27298463_27298560_27310800
transcript_89749.known	chr8	-	423	3	FSM	ENSG00000104228.13	ENST00000519219.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGGACCAGCTGGGAG	400	False	NA	NA	False	NA	NA	NA	27310856	27294039	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27294311_27298463_27298560_27310800
transcript_89750.known	chr8	+	4074	31	FSM	ENSG00000120899.18	ENST00000346049.10	4074	31	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_21	4.15478305356877	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGGTTTGTTTTGTTTG	8	True	NA	23	True	ATTAAA	-15	NA	27325551	27459386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_27325682_27397547_27397789_27419894_27420074_27420656_27420745_27422303_27422384_27430092_27430156_27430363_27430419_27430875_27431017_27431397_27431473_27432259_27432362_27433434_27433553_27434092_27434133_27434512_27434560_27435742_27435794_27436250_27436349_27437121_27437207_27437395_27437497_27437764_27437881_27439030_27439132_27439308_27439399_27440236_27440442_27442874_27442984_27444205_27444272_27445793_27445920_27450748_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
transcript_89751.known	chr8	+	2776	19	FSM	ENSG00000120915.14	ENST00000521400.6	2776	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	9.15841379333106	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAGCACACTTGCA	-25	True	NA	NA	False	NA	NA	NA	27491142	27545564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
transcript_89756.nic	chr8	+	1017	6	ISM	ENSG00000120915.14	ENST00000520623.5	1923	14	-8	27155	-8	0	5prime_fragment	FALSE	canonical	3	52	junction_5	11.0562199688682	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	3	True	NA	NA	False	NA	NA	NA	27491116	27512100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835
transcript_89758.known	chr8	+	488	3	FSM	ENSG00000120915.14	ENST00000521924.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27505046	27512100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_27505147_27506871_27506995_27511835
transcript_8976.known	chr1	+	3820	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	42.6571580874145	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	-30	True	NA	NA	False	AATAAA	-20	NA	186375837	186421375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_89762.nic	chr8	-	1580	10	NIC	ENSG00000120885.22	novel	2749	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_5	583.154851001785	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	NA	False	NA	-28	True	AATAAA	-18	NA	27614712	27597995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605070_27605171_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_89771.known	chr8	-	2098	9	FSM	ENSG00000120885.22	ENST00000405140.7	2098	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	646.110478169175	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTTCAAGAATTGCT	3269	False	NA	-86	True	AATAAA	-36	NA	27611431	27597807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611145
transcript_89772.nic	chr8	-	1880	9	NIC	ENSG00000120885.22	novel	2749	9	NA	NA	-105	0	intron_retention	FALSE	canonical	3	48	junction_8	634.707806789865	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	2844	False	NA	-28	True	AATAAA	-18	NA	27611856	27597995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611600
transcript_89774.known	chr8	-	2749	9	FSM	ENSG00000120885.22	ENST00000316403.15	2749	9	0	0	0	0	multi-exon	TRUE	canonical	3	1514	junction_4	184.220613328151	2147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTCCACTGTTA	0	True	NA	NA	False	NA	NA	NA	27614700	27596916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_89785.known	chr8	-	303	3	FSM	ENSG00000120885.22	ENST00000519472.5	303	3	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_2	97	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGGAGCCGCTACCGC	19	False	NA	17	True	AAGAAA	-5	NA	27614681	27608936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27609087_27610474_27610601_27614654
transcript_89789.known	chr8	+	3754	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	29.446391969136	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGCTTCCCTTAATC	7	True	NA	NA	False	NA	NA	NA	27774553	27805316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
transcript_89792.known	chr8	-	3627	9	FSM	ENSG00000147419.19	ENST00000356537.9	3627	9	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_6	38.9228001947445	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTGTGAGAGAGATT	-20	True	NA	-11	True	AATAAA	-21	NA	27772640	27733315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_89797.known	chr8	-	3586	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	123.601235050959	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTGTGAGAGAGA	-33	True	NA	-13	True	AATAAA	-19	NA	27772653	27733317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_89798.known	chr8	-	977	8	FSM	ENSG00000147419.19	ENST00000519509.5	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	148.729723365052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGAAACACTTTTCA	-20	True	NA	32	True	AAAACA	-2	NA	27772640	27735861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_89803.known	chr8	-	1836	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	14.8516473352766	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTCTCAGCATTATT	-14	True	NA	-24	True	AATAAA	-44	NA	27837817	27809623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
transcript_89807.known	chr8	-	1734	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	186.390867682823	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTGATATATGAATTC	-19	True	NA	-15	True	AATAAA	-23	NA	27772639	27735051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_89811.known	chr8	-	460	7	FSM	ENSG00000147419.19	ENST00000524084.5	460	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	172.621615744443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTTTGGTTTCATCTG	-7	True	NA	NA	False	NA	NA	NA	27772627	27736162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27736246_27740471_27740518_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_89812.nic	chr8	-	618	7	ISM	ENSG00000147419.19	ENST00000356537.9	3627	9	-15	14809	-2	-53	5prime_fragment	FALSE	canonical	3	411	junction_4	42.2282159488442	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAAAAAGAAGAAATGA	-35	False	NA	62	True	AAAAAG	-23	NA	27772655	27748124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_89815.known	chr8	-	819	6	FSM	ENSG00000168078.10	ENST00000524266.1	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	45.6709973615642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGTGTGGCTTGCGTA	20	True	NA	NA	False	NA	NA	NA	27837783	27810293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27828104_27828199_27833055_27833134_27837651
transcript_89821.known	chr8	+	3148	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	19.6418181543401	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCATGTGGTTTTCT	-13	True	NA	17	True	AATAAA	-19	NA	28093138	28191153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_89824.known	chr8	+	1914	14	FSM	ENSG00000134014.17	ENST00000524103.5	1914	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	49.2925093628833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCAGGTGGCCTATT	2880	False	NA	-92	True	NA	NA	NA	28093111	28189992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_89828.known	chr8	+	1924	13	FSM	ENSG00000134014.17	ENST00000519261.5	1924	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	66.8098462470582	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGAGTAGTTTATT	-12	True	NA	10	True	AATAAA	-22	NA	28093139	28190094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_89829.nic	chr8	-	1197	9	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.975132676003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	4770	False	NA	-49	True	AGTAAA	-16	NA	28490282	28428411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452367_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_89830.known	chr8	-	1254	9	FSM	ENSG00000214050.8	ENST00000380254.7	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.9285218253543	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	15	True	NA	-49	True	AGTAAA	-16	NA	28490229	28428411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_89831.known	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	23.259406699226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	4774	False	NA	-85	True	NA	NA	NA	28490278	28428447	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
transcript_89832.known	chr8	+	13770	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	41.8495848856597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	-16	True	NA	12	True	AATAAA	-15	NA	28494211	28574258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_89834.known	chr8	+	13740	7	FSM	ENSG00000104290.11	ENST00000537916.2	13740	7	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_5	47.5444236711543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTACCTGATTAATTAT	-23	True	NA	21	True	AATAAA	-24	NA	28494204	28574267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_89840.known	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_7	23.7841859225831	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-20	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_89841.known	chr8	-	2759	16	FSM	ENSG00000104299.15	ENST00000416984.6	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	47.421514104887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	NA	False	NA	-5	True	AATAAA	-18	NA	28890242	28767660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28850212_28850274_28859435_28859564_28889873
transcript_89843.nic	chr8	-	2406	16	NIC	ENSG00000104299.15	novel	2549	17	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_9	49.9491296776586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-12	True	NA	-5	True	AATAAA	-18	NA	28889961	28767660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_89846.known	chr8	-	1154	10	FSM	ENSG00000104299.15	ENST00000520983.5	1154	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	20.7602421546808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTCTCACATTACTG	28	True	NA	NA	False	AATAAA	-9	NA	28889921	28793728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_89849.nic	chr8	-	1191	6	ISM	ENSG00000104299.15	ENST00000518510.5	756	8	-43	38109	-1	3027	5prime_fragment	FALSE	canonical	3	174	junction_1	15.7810012356631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTTTGCCCCCAGTGC	-21	True	NA	NA	False	NA	NA	NA	28889970	28834676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_8985.known	chr1	+	1900	13	FSM	ENSG00000157181.16	ENST00000419367.8	1900	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	55.7859873883119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGCTGG	-30	True	NA	NA	False	NA	NA	NA	186375837	186419551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_89850.known	chr8	-	498	3	FSM	ENSG00000104299.15	ENST00000520831.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATTTTGCTCATGTGT	-29	True	NA	NA	False	NA	NA	NA	28889978	28850008	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_28850274_28859435_28859564_28889873
transcript_89855.nnic	chr8	+	2484	11	NNC	ENSG00000147421.18	novel	2216	11	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5.45893762558247	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAGCTTGAGAGCAT	-16	True	NA	NA	False	ATTAAA	-43	NA	28890378	29051914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29049289_29049395_29051017
transcript_89857.nnic	chr8	+	2481	11	NNC	ENSG00000147421.18	novel	1765	10	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5.57584074378026	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAGCTTGAGAGCAT	-16	True	NA	NA	False	ATTAAA	-43	NA	28890378	29051914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049395_29051017
transcript_89859.known	chr8	+	3711	10	FSM	ENSG00000147421.18	ENST00000287701.15	3711	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	5.20920363099157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAAGTGAAGTGGAGC	0	True	NA	NA	False	AATATA	-22	NA	28890394	29053262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29051017
transcript_89860.nic	chr8	+	2379	10	NIC	ENSG00000147421.18	novel	2216	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	5.35412613473634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTTGAGAGCATTGG	-16	True	NA	NA	False	ATTAAA	-17	NA	28890378	29051917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29051017
transcript_89867.nic	chr8	-	1742	16	ISM	ENSG00000197892.13	ENST00000521515.1	2765	18	-33	2881	-6	1553	5prime_fragment	FALSE	canonical	2	11	junction_5	4.79814779078576	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCAGAACGAGAGGATG	-1	True	NA	NA	False	AAAAAG	-6	NA	29263130	29148743	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_89868.nic	chr8	-	1718	15	ISM	ENSG00000197892.13	ENST00000521515.1	2765	18	-33	4434	-6	0	5prime_fragment	FALSE	canonical	2	11	junction_4	4.91146098219174	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGATGTTGTTCATGTCC	-1	True	NA	NA	False	NA	NA	NA	29263130	29150296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_89869.known	chr8	-	1981	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	394.550072867817	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTCATTCTTTCTA	206	False	NA	-11	True	AATAAA	-13	NA	30083124	30063097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
transcript_89870.known	chr8	-	1741	6	FSM	ENSG00000133872.14	ENST00000521265.5	1741	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	297.31760795486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATCAATAAAAACA	382	False	NA	-39	True	NA	NA	NA	30082948	30063125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30063914_30066027_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
transcript_89871.known	chr8	-	1803	5	FSM	ENSG00000133872.14	ENST00000520303.5	1803	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_4	315.488113880698	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAGAATCAATAAA	177	False	NA	-43	True	NA	NA	NA	30083153	30063129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
transcript_89873.known	chr8	+	1054	7	FSM	ENSG00000104671.8	ENST00000221114.8	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	21.9012937213003	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTGGATTTGTAGC	-3	True	NA	8	True	ATTAAA	-19	NA	30156368	30183639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_89877.known	chr8	+	820	6	FSM	ENSG00000104671.8	ENST00000522141.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	135.222187528527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGACAAGAAAAGACATAC	299	False	NA	-62	True	TATAAA	-38	NA	30156318	30183461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30156407_30164110_30164176_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_8988.known	chr1	+	2879	18	FSM	ENSG00000116711.10	ENST00000367466.4	2879	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.1104244862123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGATAACTGAGTTTT	-30	True	NA	NA	False	AATAAA	-20	NA	186828948	186988981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_186829036_186854285_186854388_186870434_186870517_186893010_186893160_186894097_186894212_186906964_186907003_186911247_186911390_186932762_186932900_186939007_186939231_186939979_186940095_186946636_186946775_186946868_186946962_186950656_186950729_186956101_186956345_186965408_186965594_186977592_186977789_186979314_186979473_186988376
transcript_89881.known	chr8	+	3163	4	FSM	ENSG00000104660.19	ENST00000321250.13	3163	4	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	46.6499970227461	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTCGTGTCCCAA	-43	True	NA	NA	False	NA	NA	NA	30095407	30108524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30105745
transcript_89883.known	chr8	+	1389	4	FSM	ENSG00000104660.19	ENST00000523116.5	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	368.372094491426	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCATATCTTTTCCAGA	29	True	NA	NA	False	NA	NA	NA	30095479	30138348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30137271
transcript_89886.known	chr8	+	589	3	FSM	ENSG00000104660.19	ENST00000518001.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGAAGGATTAAAAGGAT	-41	True	NA	-11	True	NA	NA	NA	30095409	30106028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30095529_30104299_30104487_30105745
transcript_89887.nic	chr8	+	910	2	ISM	ENSG00000104660.19	ENST00000650149.1	2889	5	-27	5333	-19	-2420	5prime_fragment	FALSE	canonical	3	753	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTCCTTAGGATAGA	385	False	NA	NA	False	NA	NA	NA	30095388	30102667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_30095529_30101897
transcript_8989.known	chr1	+	2393	3	FSM	ENSG00000230426.5	ENST00000429725.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTCTAGAAATCATTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	187641225	187643860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_187641270_187641375_187641482_187641617
transcript_89890.known	chr8	-	396	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATGCAGCATATAT	27	False	NA	NA	False	AAAACA	-35	NA	30117779	30117383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30117400_30117800
transcript_89891.known	chr8	-	403	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGCGTCATTATGCCCT	1877	False	NA	-2	True	AATAAA	-19	NA	30156232	30155829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30155800_30156200
transcript_89895.known	chr8	+	2874	9	FSM	ENSG00000157110.16	ENST00000397323.9	2874	9	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_8	368.9835489219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	0	True	NA	25	True	AATAAA	-20	NA	30384540	30572256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_89901.nic	chr8	+	998	9	NIC	ENSG00000157110.16	novel	839	9	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	495.694320499035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGTAAGAAATAGCGT	6275	False	NA	12	True	AATAAA	-24	NA	30442559	30570757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_89903.nic	chr8	+	2497	9	NIC	ENSG00000157110.16	novel	839	9	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	495.694320499035	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	6275	False	NA	25	True	AATAAA	-20	NA	30442559	30572256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_89911.known	chr8	+	1341	7	FSM	ENSG00000157110.16	ENST00000339877.8	1341	7	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_6	251.448912416728	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	87	False	NA	17	True	AATAAA	-28	NA	30384510	30547522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_89912.known	chr8	+	842	7	FSM	ENSG00000157110.16	ENST00000520161.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	526.65981008195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTCAATAAAAATTTTAA	300	False	NA	-22	True	NA	NA	NA	30385202	30547483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_89914.nic	chr8	+	934	7	NIC	ENSG00000157110.16	novel	1613	6	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	515.529716785453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	6275	False	NA	17	True	AATAAA	-28	NA	30442559	30547522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_89915.nnic	chr8	+	931	7	NNC	ENSG00000157110.16	novel	1613	6	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	526.988219349668	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	6284	False	NA	17	True	AATAAA	-28	NA	30442568	30547522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_30442807_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_89918.known	chr8	-	754	3	FSM	ENSG00000254109.6	ENST00000523643.5	754	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCCAGGACTTTGTCC	622	False	NA	NA	False	AATAAA	-24	NA	30384740	30382123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30382616_30383127_30383363_30384713
transcript_89919.known	chr8	-	1747	8	FSM	ENSG00000197265.9	ENST00000355904.9	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_2	29.352189363115	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATGTTTTCTTTTAA	-19	True	NA	0	True	AATAAA	-17	NA	30658236	30578317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
transcript_8992.known	chr1	+	1348	5	FSM	ENSG00000116741.8	ENST00000235382.7	1348	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	4.33012701892219	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGAGTCTAGATGTGA	-2	True	NA	15	True	AATAAA	-25	NA	192809038	192812275	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_192809182_192810165_192810268_192810369_192810432_192810980_192811148_192811401
transcript_89923.known	chr8	+	1451	8	FSM	ENSG00000104691.16	ENST00000265616.10	1451	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	8.63311138842179	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	-8	True	NA	27	True	AATAAA	-38	NA	30744163	30767006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_89924.known	chr8	+	1624	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.2418631157217	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	2	True	NA	27	True	AATAAA	-38	NA	30744173	30767006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_89927.known	chr8	+	1202	7	FSM	ENSG00000104691.16	ENST00000341403.9	1202	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.8177502009154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATTTTGCCTTGTATT	17	True	NA	-74	True	NA	NA	NA	30744188	30766905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_89930.known	chr8	-	1946	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	22.3215142855497	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTATTGTGTTGTG	-13	True	NA	-10	True	AATAAA	-21	NA	30812818	30785615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
transcript_89935.nic	chr8	-	1821	3	NIC	ENSG00000172733.12	novel	2693	2	NA	NA	224	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	7	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTGGATTCTTAATTA	631	False	NA	-4	True	AATAAA	-18	NA	31033132	30995801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_30996698_31031918_31032789_31033077
transcript_89938.known	chr8	+	7575	35	FSM	ENSG00000165392.11	ENST00000298139.7	7575	35	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_19	17.6535527267299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCTTTGACCTTTT	-5	True	NA	23	True	ATTAAA	-27	NA	31033809	31176138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
transcript_89942.nic	chr8	+	1832	12	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-74	88276	-52	2634	5prime_fragment	FALSE	canonical	3	118	junction_6	12.4741054102138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGATGATGA	585	False	NA	NA	False	ACTAAA	-1	NA	31033735	31087862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775
transcript_89944.nic	chr8	+	1477	8	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-74	99527	-52	-8617	5prime_fragment	FALSE	canonical	3	118	junction_6	9.50832073845356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGATTCAAAGTTGTCA	585	False	NA	NA	False	AATAAA	-20	NA	31033735	31076611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172
transcript_89945.nic	chr8	+	2188	7	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-74	106661	-52	-15751	5prime_fragment	FALSE	canonical	3	118	junction_6	10.2265993044283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACAGTTTTAAAAAAGGA	585	False	NA	NA	False	NA	NA	NA	31033735	31069477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257
transcript_89946.known	chr8	+	1703	7	FSM	ENSG00000157168.20	ENST00000650919.1	1703	7	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_6	12.512216252749	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCATTGAGGCATTT	8	False	NA	37	True	AATAAA	-42	NA	32548234	32743253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674
transcript_89947.known	chr8	+	1477	4	FSM	ENSG00000247134.8	ENST00000666042.1	1477	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	12.3558353285671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	NA	False	NA	NA	False	AGTAAA	-1	NA	32927920	33045445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33041634_33041744_33044366
transcript_89949.nic	chr8	+	627	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	15	241	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.030989097709	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	-6	True	NA	22	True	AATAAA	-19	NA	32927967	33044614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_89950.nic	chr8	+	852	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	15	16	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.030989097709	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGGACTTTCACTTC	-6	True	NA	8	True	AATAAA	-34	NA	32927967	33044839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_89951.known	chr8	+	657	4	FSM	ENSG00000247134.8	ENST00000670899.1	657	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	112.178429299041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	3	True	NA	22	True	AATAAA	-19	NA	32927976	33044614	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996356_33041634_33041772_33044366
transcript_89952.known	chr8	+	1314	3	FSM	ENSG00000247134.8	ENST00000666659.1	1314	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	80	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	-6	True	NA	NA	False	AGTAAA	-1	NA	32927967	33045445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_33041634_33041744_33044366
transcript_89954.known	chr8	+	1397	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	33.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	NA	False	NA	NA	False	AGTAAA	-1	NA	32927912	33045445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_33041634_33041772_33044366
transcript_89956.known	chr8	+	1277	3	FSM	ENSG00000247134.8	ENST00000657565.1	1277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACCCCAGCCAAACACT	3	True	NA	NA	False	NA	NA	NA	32927976	33045410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_32996200_32996317_33044366
transcript_89959.known	chr8	+	634	2	FSM	ENSG00000247134.8	ENST00000664284.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTTCAGGGAGTCTGA	NA	False	NA	19	True	AATAAA	-45	NA	32927943	33044850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_32928094_33044366
transcript_89961.known	chr8	-	3549	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	18.7399973319102	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGAGTTGTGTTTTTT	-22	True	NA	NA	False	TATAAA	-2	NA	33473146	33370823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
transcript_89965.nnic	chr8	-	1429	4	NIC	ENSG00000172728.16	novel	3549	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_1	41.2337510083939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTATCCACTCTTCAAG	7	True	NA	-27	True	AATAAA	-17	NA	33473117	33372078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_33372805_33453215_33453511_33461371_33461726_33473063
transcript_89966.known	chr8	-	1623	4	FSM	ENSG00000172728.16	ENST00000520767.5	1623	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	16.062378404209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCTGTTGTTGCCAC	-10	True	NA	NA	False	NA	NA	NA	33473134	33388895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33389799_33453215_33453511_33461371_33461726_33473063
transcript_89968.known	chr8	-	2187	3	FSM	ENSG00000172728.16	ENST00000416169.5	2187	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCCAGTCTTGGGTA	11	True	NA	NA	False	ATTAAA	-15	NA	33473113	33451727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33453511_33461371_33461726_33473063
transcript_89970.known	chr8	+	3561	10	FSM	ENSG00000198042.11	ENST00000360128.11	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	43.1134020009876	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTGACTGGGAGAAAAAA	-4	True	NA	8	True	AATAAA	-18	NA	33485181	33501262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231_33497298_33498431
transcript_89975.known	chr8	-	2516	8	FSM	ENSG00000129696.13	ENST00000613904.1	2516	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	101.210429405315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCTTCCTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	33513185	33498508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33512959
transcript_89976.known	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	73.7405822419904	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-12	True	NA	-2	True	AATAAA	-35	NA	33513135	33498721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
transcript_89979.nic	chr8	-	1824	7	NIC	ENSG00000129696.13	novel	2131	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	112.17199095833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	-30	True	NA	-20	True	AATAAA	-19	NA	33513153	33498953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966_33512713_33513081
transcript_89980.nic	chr8	-	1660	7	NIC	ENSG00000129696.13	novel	2131	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	112.17199095833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	-30	True	NA	-73	True	NA	NA	NA	33513153	33499117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966_33512713_33513081
transcript_89982.known	chr8	-	2242	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	42.0317340430616	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	14	True	NA	-20	True	AATAAA	-19	NA	33513109	33498953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
transcript_89984.known	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.05941170815567	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-2	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
transcript_89985.known	chr8	-	1754	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	11.4309521329882	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	-41	True	NA	-3	True	AATAAA	-16	NA	33600023	33591329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
transcript_89987.known	chr8	+	5387	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.01855201914552	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATACGAAGGGCTTT	2	True	NA	NA	False	AATAAA	-25	NA	37736633	37758422	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
transcript_89990.nic	chr8	+	1483	12	NIC	ENSG00000147475.17	novel	1602	12	NA	NA	0	125	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	6.35973906632462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATGAACTTAAATCC	-2	True	NA	NA	False	NA	NA	NA	37736680	37754236	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_37737008_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
transcript_89992.known	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	64.3466377980883	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	2	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
transcript_89997.known	chr8	+	559	5	FSM	ENSG00000147471.12	ENST00000523994.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	131.609270190211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTAAGTATAGTAAAG	12	False	NA	NA	False	AATAAA	-28	NA	37762654	37766716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766481
transcript_9.known	ERCC-00028	+	1120	1	FSM	ERCC-00028A	DQ459419	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_ERCC-00028_+_0_1100
transcript_90.known	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	1408	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4003_4081_6057
transcript_90001.nnic	chr8	+	593	5	NNC	ENSG00000147471.12	novel	516	5	NA	NA	-1	366	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	146.707830397699	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTGAGTAACTGAACTT	-10	True	NA	NA	False	AATAAA	-18	NA	37762593	37767107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766899
transcript_90006.known	chr8	+	770	4	FSM	ENSG00000147471.12	ENST00000520073.5	770	4	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_3	13.8884444373331	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAATTATAGTAAAGTA	-9	True	NA	NA	False	AATAAA	-36	NA	37762594	37766741	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279
transcript_90012.known	chr8	-	1192	5	FSM	ENSG00000104221.13	ENST00000520601.5	1192	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.8648172562579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGCCAGTCCTGCCCTT	26	False	NA	NA	False	NA	NA	NA	37849838	37844701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_37845214_37845685_37845775_37846853_37847176_37848595_37848656_37849629
transcript_90014.known	chr8	-	2560	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_2	7.40870359029762	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGGGAGATGGGTCTT	3	True	NA	NA	False	NA	NA	NA	37849861	37843267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
transcript_90015.nnic	chr8	+	979	3	NNC	ENSG00000187840.5	novel	827	3	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	1703.5	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	NA	False	NA	22	True	AATAAA	-26	NA	38030017	38060365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_38030355_38057080_38057261_38059903
transcript_90016.known	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	4	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	-3	True	NA	22	True	AATAAA	-26	NA	38030533	38060365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38030719_38057080_38057261_38059903
transcript_90021.known	chr8	+	2918	16	FSM	ENSG00000129691.16	ENST00000343823.11	2918	16	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	43.355071470616	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTCACGCCTGTAATC	-3	True	NA	NA	False	ATTAAA	-38	NA	38105528	38140080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_90024.known	chr8	+	2678	16	FSM	ENSG00000129691.16	ENST00000428278.6	2678	16	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	91.1134579643546	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	261	False	NA	21	True	AATAAA	-18	NA	38105792	38139703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_90027.nic	chr8	+	2459	15	NIC	ENSG00000129691.16	novel	2918	16	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	122.914874309542	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	-20	True	NA	21	True	AATAAA	-18	NA	38105511	38139703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_9003.known	chr1	-	1346	12	FSM	ENSG00000116750.14	ENST00000367451.8	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	183.0230080826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATGAAAGTGATATTAA	15	True	NA	-21	True	CATAAA	-38	NA	193059349	193016161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_90030.known	chr8	+	2433	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	144.642275131104	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	26	False	NA	21	True	AATAAA	-18	NA	38105938	38139703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_90042.known	chr8	-	2565	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.44802681092953	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGCGTGGTG	-1	True	NA	NA	False	ACTAAA	-6	NA	38150952	38142699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
transcript_90049.known	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.2091253319111	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	18	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
transcript_90055.known	chr8	+	1943	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	104.124924969961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACATTTTTGTACAT	76	False	NA	NA	False	TTTAAA	-12	NA	38176587	38210888	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
transcript_90059.known	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	230.752874064201	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-2	True	NA	76	True	AAGAAA	-42	NA	38176730	38163427	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
transcript_90060.nnic	chr8	-	739	4	NNC	ENSG00000175324.10	novel	906	4	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	247.723412072595	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	NA	False	NA	-16	True	AATAAA	-16	NA	38176748	38163338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_38163841_38169801_38169918_38171964_38172034_38176696
transcript_90066.known	chr8	-	906	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	20.5101600838869	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	-14	True	NA	-16	True	AATAAA	-16	NA	38176493	38163338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
transcript_90067.known	chr8	-	975	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	265.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTATTTCCAAGTTTGA	54	False	NA	-12	True	AATAAA	-20	NA	38176674	38163334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38171964_38172034_38176274
transcript_90068.known	chr8	-	1568	4	FSM	ENSG00000175324.10	ENST00000522515.5	1568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	250.551835399827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATGAATCTCAAAA	12	False	NA	-36	True	NA	NA	NA	38176716	38163358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38175815
transcript_90069.known	chr8	-	3995	10	FSM	ENSG00000147548.17	ENST00000316985.7	3995	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	29.6760284854066	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGTGTTGGGTTTTAT	-26	True	NA	1	True	AATAAA	-41	NA	38382272	38316416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
transcript_90071.known	chr8	-	577	3	FSM	ENSG00000147548.17	ENST00000534155.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATCCGTCAGGAGGAT	19	True	NA	NA	False	NA	NA	NA	38382227	38348095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38348216_38363872_38363901_38381798
transcript_90072.known	chr8	-	1524	2	FSM	ENSG00000147548.17	ENST00000528627.1	1524	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAATCCTTAAATATTT	4699	False	NA	-19	True	AATAAA	-19	NA	38326835	38319754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38321173_38326729
transcript_90074.known	chr8	-	2134	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	135.839877142989	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-26	True	NA	-20	True	AATAAA	-2	NA	38269224	38263129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_90076.nic	chr8	-	936	7	NIC	ENSG00000147535.17	novel	2134	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	177.053115068771	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGGTAAATGTGT	-34	True	NA	-28	True	AGTAAA	-11	NA	38269232	38263137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_38263407_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_90078.known	chr8	-	853	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	172.937368238716	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-9	True	NA	-4	True	AATAAA	-18	NA	38269207	38264738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_90080.known	chr8	-	581	6	FSM	ENSG00000147535.17	ENST00000531109.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	200.482019143862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTCTGACTGATGCAGA	23	True	NA	NA	False	NA	NA	NA	38269175	38264542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268881_38268991_38269125
transcript_9009.known	chr1	-	1355	12	FSM	ENSG00000116750.14	ENST00000367450.7	1355	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	190.002087852817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTTAGTTTTCTGGT	782	False	NA	38	True	NA	NA	NA	193059296	193016102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_90094.nic	chr8	-	790	5	NIC	ENSG00000147535.17	novel	794	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	214.528989882487	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	3	True	NA	-17	True	AATAAA	-18	NA	38269195	38266979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269081
transcript_90095.known	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	59.1121814857141	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	NA	False	NA	-17	True	AATAAA	-18	NA	38269243	38266979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_90100.nic	chr8	-	692	4	ISM	ENSG00000147535.17	ENST00000531109.5	581	6	-57	2437	-2	0	5prime_fragment	FALSE	canonical	3	26	junction_2	238.942577946158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-34	True	NA	-17	True	AATAAA	-18	NA	38269232	38266979	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_38267392_38267896_38267961_38268881_38268991_38269125
transcript_90103.known	chr8	-	1590	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	42.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACCTTTAACGAAG	-32	True	NA	-38	True	NA	NA	NA	38269230	38267000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38267392_38267896_38268991_38269125
transcript_90105.known	chr8	+	2856	11	FSM	ENSG00000165046.13	ENST00000379957.9	2856	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.2614551505325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGGTATTTTAATTAGT	-24	True	NA	NA	False	AATACA	-18	NA	38386475	38409527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38386569_38387949_38388031_38392541_38392996_38394097_38394242_38400271_38400410_38400852_38401054_38402524_38402645_38404392_38404507_38406945_38407039_38407361_38407464_38408211
transcript_90106.known	chr8	+	2745	11	FSM	ENSG00000165046.13	ENST00000523268.6	2745	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.34050688284214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGGTATTTTAATTAGT	2	True	NA	NA	False	AATACA	-18	NA	38386501	38409527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38386569_38387949_38388031_38392541_38392996_38394182_38394242_38400271_38400410_38400852_38401054_38402524_38402645_38404392_38404507_38406945_38407039_38407361_38407464_38408211
transcript_90107.known	chr8	+	1776	11	FSM	ENSG00000165046.13	ENST00000523983.6	1776	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.28024389337134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTTTTTTTAGTTTCA	1	True	NA	NA	False	TATAAA	-15	NA	38386500	38408543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38386569_38387949_38388031_38392612_38392996_38394097_38394242_38400271_38400410_38400852_38401054_38402524_38402645_38404392_38404507_38406945_38407039_38407361_38407464_38408211
transcript_90108.known	chr8	+	2240	3	FSM	ENSG00000165046.13	ENST00000519476.6	2240	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATACTTTAGGGTCCAC	66	False	NA	NA	False	ATTAAA	-30	NA	38386302	38394434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38386569_38387949_38388031_38392541
transcript_90111.known	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_18	20.9863361226984	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	25	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_90115.known	chr8	+	3894	22	FSM	ENSG00000168615.13	ENST00000677359.1	3894	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	31.7813533659079	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	-34	True	NA	-14	True	AATACA	-1	NA	38996913	39104968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091242_39091347_39101862_39101931_39103606
transcript_90116.known	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	82.9832647117611	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-3	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
transcript_90117.known	chr8	-	469	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	213.264051249983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAAGTGATGGCAGCA	-3	True	NA	NA	False	NA	NA	NA	38996509	38991371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
transcript_90119.known	chr8	-	3295	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	227.394419945218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	23	True	NA	0	True	AATAAA	-21	NA	38996483	38988807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
transcript_90120.known	chr8	-	1631	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	213.735038462735	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-3	True	NA	-3	True	AATAAA	-15	NA	38996509	38990804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
transcript_90132.nic	chr8	-	1455	4	NIC	ENSG00000169490.17	novel	1631	4	NA	NA	-30	0	intron_retention	FALSE	canonical	3	36	junction_3	218.445009607046	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-33	True	NA	-3	True	AATAAA	-15	NA	38996539	38990804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_38991546_38993544_38993661_38995317_38995795_38996418
transcript_90139.known	chr8	+	1709	12	FSM	ENSG00000131203.13	ENST00000522495.5	1709	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	161.988674229134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	22	False	NA	123	True	AATAAA	-17	NA	39902374	39928426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_90143.nnic	chr8	+	1649	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	416	junction_8	116.180893437777	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902286	39928426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_90144.nnic	chr8	+	2013	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	416	junction_8	116.180893437777	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	NA	False	NA	NA	False	AATAAA	-21	NA	39902286	39928790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_90146.nnic	chr8	+	1511	10	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	135.100602661521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902303	39928426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_90149.nnic	chr8	+	993	7	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	426	junction_6	139.308709945454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGTGTCATAAATTCA	NA	False	NA	NA	False	AATAAA	-19	NA	39902286	39922911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551
transcript_90153.nnic	chr8	+	420	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	12	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	197	junction_3	277.378201498724	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	39902286	39915721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
transcript_90160.known	chr8	+	700	5	FSM	ENSG00000131203.13	ENST00000521636.1	700	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_4	38.6417843790889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGTGTCATAAATTCA	3993	False	NA	NA	False	AATAAA	-19	NA	39917884	39922911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551
transcript_90161.known	chr8	+	1849	10	FSM	ENSG00000131203.13	ENST00000518237.6	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	33.8059093380557	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	-1	True	NA	NA	False	AATAAA	-21	NA	39913890	39928790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_90162.known	chr8	-	663	3	FSM	ENSG00000253802.2	ENST00000521030.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGTGTACTCCGGAA	7	True	NA	NA	False	ATTAAA	-20	NA	40343363	40333172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_40333670_40333873_40333954_40343277
transcript_90165.known	chr8	-	2471	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	9.65516557197349	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-3	True	NA	NA	False	AGTAAA	-20	NA	40897826	40530589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_90167.known	chr8	-	2250	6	FSM	ENSG00000165061.15	ENST00000315769.11	2250	6	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_2	17.9666357451806	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-10	False	NA	NA	False	AGTAAA	-20	NA	40897833	40530589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_90168.nnic	chr8	-	2776	6	NNC	ENSG00000165061.15	novel	564	5	NA	NA	-28	33025	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	19.4422220952236	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGACTTTTTTTTCCATT	NA	False	NA	NA	False	AATAAA	-24	NA	40897861	40641338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_40643355_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_90173.nic	chr8	-	1374	5	ISM	ENSG00000165061.15	ENST00000297737.11	2471	7	-35	143500	-28	274	5prime_fragment	FALSE	canonical	3	34	junction_1	10.5475115548645	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGATGATAAAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	40897861	40674089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_90174.nic	chr8	-	1988	4	ISM	ENSG00000165061.15	ENST00000315769.11	2250	6	-28	165199	-28	1207	5prime_fragment	FALSE	canonical	3	36	junction_2	9.46337971105226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40897861	40695788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_40697402_40767640_40767731_40825574_40825681_40897682
transcript_9018.known	chr1	-	1534	12	FSM	ENSG00000116750.14	ENST00000367448.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	178.673024227993	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	3	True	NA	NA	False	AATAAA	-20	NA	193059361	193018404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_90181.known	chr8	+	6298	13	FSM	ENSG00000158669.11	ENST00000396987.7	6298	13	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	43.0989655714999	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTTTGATTTATTAAA	3	True	NA	NA	False	AATAAA	-17	NA	41578199	41625001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_90194.nnic	chr8	+	1725	9	NNC	ENSG00000147536.12	novel	3770	8	NA	NA	-12	-267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	40.8197256237717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGGTTCTGAAACAGG	100	False	NA	79	True	AATAAA	-25	NA	41529205	41544763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990_41542130_41543962
transcript_90195.nnic	chr8	+	1992	9	NNC	ENSG00000147536.12	novel	3770	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	40.8197256237717	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	100	False	NA	22	True	AATAAA	-21	NA	41529205	41545030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990_41542130_41543962
transcript_902.known	chr1	-	1621	5	FSM	ENSG00000132906.18	ENST00000348549.9	1621	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	46.8688329276503	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTATTTCTTCCCTC	9	True	NA	0	True	AATAAA	-23	NA	15524347	15492269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15518109_15518396_15524068
transcript_90200.known	chr8	+	3770	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	15.9770243200181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	5	True	NA	22	True	AATAAA	-21	NA	41529260	41545030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
transcript_90204.known	chr8	+	808	6	FSM	ENSG00000147533.18	ENST00000518270.5	808	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	278.799282638962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTGTAGGACTCTGT	NA	False	NA	NA	False	NA	NA	NA	41490395	41509769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41490567_41490832_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_90206.known	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	277.40252342039	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	-12	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
transcript_90210.known	chr8	+	835	6	FSM	ENSG00000147536.12	ENST00000520354.5	835	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	50.6699121767544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTTGGTGGTGTGCACC	-7	True	NA	5	True	AATACA	-13	NA	41529217	41542239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41541808_41541900_41541990
transcript_90212.known	chr8	+	494	4	FSM	ENSG00000147536.12	ENST00000520631.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	12.5521135891752	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACCTGGAGGGATT	2	True	NA	NA	False	NA	NA	NA	41529226	41537301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179
transcript_90215.known	chr8	+	2099	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	20.4266982158155	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	8	True	NA	NA	False	AATAAA	-16	NA	41490581	41510980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_90216.known	chr8	+	3669	10	FSM	ENSG00000070718.12	ENST00000518421.5	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	29.665210118218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGTCCTAAGTGGTT	NA	False	NA	21	True	AATAAA	-17	NA	42152945	42171182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42153106_42154477_42154537_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_90219.known	chr8	+	3494	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	11.7046999107196	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	6	True	NA	22	True	AATAAA	-18	NA	42153062	42171183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_90228.known	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	8.67107259801231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	1559	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_90229.known	chr8	-	3062	14	FSM	ENSG00000104368.19	ENST00000220809.9	3062	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	3.54347470962493	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACGAGGAGCCATGG	-1	True	NA	NA	False	GGGGCT	-39	NA	42207565	42174717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
transcript_90232.known	chr8	+	3938	22	FSM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_15	13.2166664522051	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	-16	True	NA	24	True	AATAAA	-26	NA	42271301	42332460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_90238.nic	chr8	+	1431	15	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	52.0120178420334	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338457	42371808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42354416_42354522_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_90241.known	chr8	+	1290	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	23.3238075793812	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	0	True	NA	16	True	AATAAA	-17	NA	42338493	42371808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_90243.nic	chr8	+	1239	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	42.6389884182696	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338457	42371808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_90249.nic	chr8	+	1264	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	23.3249985113731	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	-5	True	NA	16	True	AATAAA	-17	NA	42338461	42371808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_90253.nic	chr8	+	1177	12	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	44.5441558252238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	-5	True	NA	16	True	AATAAA	-17	NA	42338461	42371808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_90263.nnic	chr8	+	1080	10	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	53.80508948344	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	-5	True	NA	16	True	AATAAA	-17	NA	42338461	42371808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42338686_42344952_42345020_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_90266.known	chr8	-	896	4	FSM	ENSG00000104371.5	ENST00000220812.3	896	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAATCTTGGACATTAAC	0	True	NA	NA	False	AATAAA	-23	NA	42377229	42374062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42374360_42374760_42374914_42375679_42375831_42376934
transcript_9027.known	chr1	-	5184	11	FSM	ENSG00000116750.14	ENST00000367454.6	5184	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	77.1484931803597	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTCTCATGTAGGTGTA	4	True	NA	NA	False	AATAAA	-17	NA	193059360	193012253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_90271.known	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	TRUE	canonical	3	1159	junction_5	72.4161498937364	1975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	13	True	NA	66	True	NA	NA	NA	42391879	42405937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
transcript_90278.known	chr8	+	784	8	FSM	ENSG00000078668.14	ENST00000521348.5	784	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	567.767989407573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGGTGCACGTGGTG	23	True	NA	NA	False	NA	NA	NA	42391889	42402164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42396677_42396681_42398711_42398865_42399650_42399704_42401787
transcript_90283.known	chr8	-	3752	11	FSM	ENSG00000168575.10	ENST00000520262.6	3752	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	35.2958921122558	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	15	True	NA	-10	True	AATAAA	-16	NA	42501231	42416474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42501030
transcript_90284.nnic	chr8	-	2648	11	NIC	ENSG00000168575.10	novel	3752	11	NA	NA	-12	239	combination_of_known_splicesites	FALSE	canonical	3	76	junction_10	20.7376469253385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGGTGCAGTTACT	422	False	NA	-5	True	ATTAAA	-16	NA	42541723	42417563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541537
transcript_90286.known	chr8	+	2958	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	262.097098207685	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGGTATAGAGCCAAGT	2	True	NA	NA	False	AATAAA	-36	NA	42541154	42555193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
transcript_90287.known	chr8	+	878	4	FSM	ENSG00000176209.12	ENST00000498447.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	233.350951715794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGGTGACTTGACCTT	43	True	NA	NA	False	NA	NA	NA	42541657	42552829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42541706_42546468_42546607_42548374_42548781_42552543
transcript_90288.known	chr8	+	793	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	99.3724755095136	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	-2	True	NA	11	True	AATAAA	-27	NA	42541612	42552980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
transcript_90289.known	chr8	+	691	4	FSM	ENSG00000176209.12	ENST00000416469.6	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	248.439127353161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCAGAAAAAGAGCAAC	9	False	NA	NA	False	NA	NA	NA	42541792	42552608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42542156_42546468_42546607_42548655_42548781_42552543
transcript_90290.nic	chr8	+	649	3	NIC	ENSG00000176209.12	novel	793	4	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	4	True	NA	11	True	AATAAA	-27	NA	42541618	42552980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_42541706_42548655_42548781_42552543
transcript_90291.known	chr8	-	2161	3	FSM	ENSG00000131931.8	ENST00000254250.7	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTCTTTTGTAGA	-9	True	NA	-9	True	ATTAAA	-18	NA	42843325	42836673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42838337_42839185_42839382_42843023
transcript_90294.known	chr8	-	1943	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAAGTGTCTTTTGTA	11	True	NA	-11	True	ATTAAA	-16	NA	42843305	42836675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42838337_42843023
transcript_90296.known	chr8	+	14348	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	15.2593601622859	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	17	True	NA	108	True	AATAAA	-15	NA	42896977	43030535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
transcript_90299.known	chr8	-	4116	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	31.427164470672	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTTATTTTTCTGTT	-19	True	NA	-11	True	AATAAA	-23	NA	42896723	42853296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_903.known	chr1	-	3095	7	FSM	ENSG00000116771.6	ENST00000375826.4	3095	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	5.74456264653803	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTAATCTTAAAATAAC	-2	True	NA	-17	True	ATTAAA	-21	NA	15585051	15571698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15573725_15574756_15574842_15577684_15577865_15578858_15579055_15580093_15580143_15583192_15583396_15584695
transcript_90300.known	chr8	-	3764	7	FSM	ENSG00000120925.16	ENST00000527424.6	3764	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	14.9303940559741	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTGTTATTTTTC	19	True	NA	-15	True	AATAAA	-19	NA	42896605	42853300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_90301.nic	chr8	-	1762	7	NIC	ENSG00000120925.16	novel	4116	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	30.0758300892187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-14	True	NA	NA	False	NA	NA	NA	42897306	42855247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_90302.known	chr8	-	1338	7	FSM	ENSG00000120925.16	ENST00000526349.5	1338	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	38.9829022350397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAATTCAGTATTTC	-2	True	NA	-5	True	AATAAA	-15	NA	42896706	42855706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887848_42887872_42896483
transcript_90308.known	chr8	-	1265	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	37.8068776811839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGGAAAATTCAGTATT	36	True	NA	-7	True	AATAAA	-13	NA	42896588	42855708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_9031.known	chr1	-	5327	11	FSM	ENSG00000116750.14	ENST00000367455.8	5327	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	102.649111053141	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATGTAGGTGTATTTT	-2	True	NA	NA	False	AATAAA	-21	NA	193059496	193012249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_90315.known	chr8	-	1169	6	FSM	ENSG00000120925.16	ENST00000528318.5	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	16.3095064303001	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	-19	True	NA	NA	False	AAAAAG	-11	NA	42896723	42861329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_90318.known	chr8	+	1667	9	FSM	ENSG00000168522.13	ENST00000302279.8	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_5	48.6074839916653	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	-5	True	NA	32	True	AATAAA	-21	NA	43056322	43085785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_90321.known	chr8	+	982	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	204.610032271447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	2	True	NA	NA	False	AAGAAA	-10	NA	43056329	43085193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_90323.known	chr8	+	9535	4	FSM	ENSG00000185900.11	ENST00000676193.1	9535	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30.7354301526214	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTAGACATATGT	13	False	NA	15	True	AATAAA	-25	NA	43093497	43131180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_43093564_43097523_43097616_43103527_43103831_43122106
transcript_90324.known	chr8	+	3625	20	FSM	ENSG00000164808.17	ENST00000297423.9	3625	20	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_17	13.4726562107834	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGCTTTTTAATTAA	-5	True	NA	NA	False	NA	NA	NA	47260937	47736306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_90328.known	chr8	+	2745	19	FSM	ENSG00000164808.17	ENST00000522117.5	2745	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	36.2672266432803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGTAGTTATTTGTT	13	True	NA	NA	False	NA	NA	NA	47260955	47735511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_47260992_47279861_47280018_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_90341.nic	chr8	+	1724	6	ISM	ENSG00000164808.17	ENST00000524141.5	2761	15	-54	315925	-12	9032	5prime_fragment	FALSE	canonical	3	144	junction_5	11.8558002682231	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAGAACCTGTAG	-5	True	NA	NA	False	AAAACA	-14	NA	47260900	47397516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375
transcript_90342.known	chr8	-	12784	85	FSM	ENSG00000253729.8	ENST00000338368.7	12784	85	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	205.928817809784	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGTTGATGTAACATT	801	False	NA	NA	False	AGTAAA	-5	NA	47960178	47773734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
transcript_90344.nnic	chr8	+	3114	18	NNC	ENSG00000104738.18	novel	4062	17	NA	NA	1	-235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	384.075396289065	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTTGGTTACCTGGCA	-5	True	NA	NA	False	AATAAA	-13	NA	47960899	47977925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685_47976983_47977736
transcript_90345.nnic	chr8	+	3220	17	NNC	ENSG00000104738.18	novel	4062	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	392.378001541562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	-5	True	NA	NA	False	AATAGA	-10	NA	47960899	47977259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962745_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_90346.known	chr8	+	4062	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	128.460110540198	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	-9	True	NA	21	True	AATAAA	-21	NA	47960940	47978160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_90352.nic	chr8	+	666	6	ISM	ENSG00000104738.18	ENST00000648407.1	2598	15	2	14217	1	393	5prime_fragment	FALSE	canonical	3	1235	junction_1	174.452744317766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAATGTTGGCAT	-5	True	NA	NA	False	NA	NA	NA	47960899	47962799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763
transcript_90355.known	chr8	+	1322	5	FSM	ENSG00000169139.12	ENST00000521346.5	1322	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1920.43059950106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAACAAAAAGGAAATAGG	-10	True	NA	-64	True	NA	NA	NA	48008418	48061480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008471_48034865_48035062_48043032_48043182_48049852_48049979_48060681
transcript_90360.known	chr8	+	4342	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	0	0	0	0	multi-exon	FALSE	canonical	3	3458	junction_1	208.90348648758	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	2	True	NA	19	True	AATAAA	-19	NA	48008430	48064708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
transcript_90362.known	chr8	+	612	4	FSM	ENSG00000169139.12	ENST00000517630.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1826.1676325634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATGCAAAATACACATTA	22	False	NA	-15	True	ATTAAA	-5	NA	48008450	48060897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008572_48043032_48043182_48049852_48049979_48060681
transcript_90364.known	chr8	+	918	3	FSM	ENSG00000169139.12	ENST00000523432.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGGTAAATATTTGTT	-14	True	NA	50	True	NA	NA	NA	48008414	48061417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_48008471_48049852_48049979_48060681
transcript_90366.known	chr8	+	417	3	FSM	ENSG00000147481.17	ENST00000521574.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCGGAGGGGAGAAGG	8	True	NA	NA	False	AAAAAG	-20	NA	49909803	49911583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_49909905_49910891_49911045_49911420
transcript_90368.known	chr8	-	1204	6	FSM	ENSG00000168300.14	ENST00000519559.1	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	72.2921849164901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTTGTTTTAGCT	215	False	NA	7	True	AATAAA	-39	NA	51898970	51820146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51839446_51839639_51845660_51845764_51898929
transcript_90369.known	chr8	-	4044	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	16.1046577113579	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTCTCCCATGGCCT	3	True	NA	-21	True	AATAAA	-18	NA	51899036	51817582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
transcript_90379.known	chr8	-	1140	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	3.34477204006491	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGCTTTTGAAGTGTG	0	True	NA	NA	False	ATTAAA	-16	NA	52565430	52534036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
transcript_90384.known	chr8	-	1892	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	56.2665886124514	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	230	False	NA	-62	True	AAGAAA	-27	NA	53843042	53715730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_90386.known	chr8	-	2120	14	FSM	ENSG00000047249.18	ENST00000359530.7	2120	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_7	26.534782353662	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	27	True	NA	1	True	AATAAA	-27	NA	53843245	53715542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_90391.nic	chr8	-	1874	13	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	72.922714034944	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	255	False	NA	-1	True	AATAAA	-30	NA	53843017	53715669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_90392.known	chr8	-	2365	13	FSM	ENSG00000047249.18	ENST00000355221.7	2365	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	53.3689334309348	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTCTATCAATCTATG	NA	False	NA	-13	True	AATAAA	-13	NA	53843558	53715556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_90398.nnic	chr8	-	1248	6	NNC	ENSG00000047249.18	novel	2365	13	NA	NA	-3308	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	92.8168088225403	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	NA	False	NA	-1	True	AATAAA	-30	NA	53775373	53715669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53775001
transcript_90401.known	chr8	-	1672	3	FSM	ENSG00000047249.18	ENST00000521335.1	1672	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	38.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCTCTACTAAAAATACAA	13	True	NA	NA	False	NA	NA	NA	53843259	53831788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53833087_53841577_53841726_53843033
transcript_90402.known	chr8	-	494	2	FSM	ENSG00000047249.18	ENST00000518072.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	NA	False	NA	-1	True	AATAAA	-30	NA	53743715	53715669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53716025_53743576
transcript_90405.known	chr8	+	1559	4	FSM	ENSG00000147509.14	ENST00000522225.5	1559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAATCTTTATTTTTCC	0	True	NA	NA	False	AATAAA	-14	NA	53880871	53959296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_53881085_53946664_53946749_53954075_53954311_53958269
transcript_90411.known	chr8	-	2777	10	FSM	ENSG00000187735.15	ENST00000521604.7	2777	10	0	0	0	0	multi-exon	FALSE	canonical	2	548	junction_4	318.306553071713	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACATTTTGTCATTTTA	-1	True	NA	-4	True	AATAAA	-23	NA	54022448	53966555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
transcript_90412.known	chr8	-	2718	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	0	0	0	0	multi-exon	FALSE	canonical	2	105	junction_8	500.783869922944	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTCATTTTATTTA	-1	True	NA	0	True	AATAAA	-27	NA	54022448	53966551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
transcript_90418.known	chr8	-	635	4	FSM	ENSG00000187735.15	ENST00000520534.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_3	36.8088153692684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGATTCAAATGGTTGC	299	False	NA	NA	False	NA	NA	NA	54022148	53993375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53993756_53999944_54000051_54010429_54010493_54022062
transcript_90420.known	chr8	-	625	4	FSM	ENSG00000187735.15	ENST00000521836.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	737.863733279316	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCGCAGAACAGCCCTG	518	False	NA	NA	False	AAGAAA	-12	NA	54021929	53993703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_53993756_53999944_54000051_54010429_54010493_54021525
transcript_90437.nic	chr8	-	2443	9	NIC	ENSG00000120992.18	novel	2515	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_2	459.29849703107	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	30	True	NA	-2	True	AATAAA	-23	NA	54101918	54046367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_54048119_54051011_54051147_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_90438.known	chr8	-	2526	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	458.404502050318	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	394	False	NA	-2	True	AATAAA	-23	NA	54101554	54046367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
transcript_90439.known	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	TRUE	canonical	3	1369	junction_4	81.1664955508121	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	1	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_90441.nnic	chr8	-	2445	9	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	114	junction_6	458.354649125543	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	30	True	NA	-2	True	AATAAA	-23	NA	54101918	54046367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065787_54065814_54100907_54100940_54101754
transcript_90453.nic	chr8	-	2419	8	NIC	ENSG00000120992.18	novel	2515	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	487.291556693208	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	30	True	NA	-2	True	AATAAA	-23	NA	54101918	54046367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54100907_54100940_54101754
transcript_90454.known	chr8	-	1308	8	FSM	ENSG00000120992.18	ENST00000343231.10	1308	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	516.020407759703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTGTTTTTTCTT	120	False	NA	39	True	AAGAAA	-4	NA	54101828	54047406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54065747_54065814_54100907_54100940_54101754
transcript_90460.known	chr8	-	2482	8	FSM	ENSG00000120992.18	ENST00000618914.4	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	475.314933190917	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-69	True	NA	-2	True	AATAAA	-23	NA	54102017	54046367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_54048119_54051011_54051189_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_90478.known	chr8	+	1729	5	FSM	ENSG00000137547.9	ENST00000260102.9	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_3	50.3115294937453	926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTGTTCAGCTCGATT	-4	True	NA	NA	False	NA	NA	NA	54135240	54148514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_54135392_54136510_54136666_54137267_54137434_54142662_54142787_54147381
transcript_90485.nic	chr8	-	2610	8	NIC	ENSG00000167904.16	novel	2573	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	37.4242091241943	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	39	False	55773397	-14	True	AATAAA	-1	NA	55773373	55738757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773226
transcript_90486.known	chr8	-	2573	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	16.2556112760851	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	34	False	55773397	-14	True	AATAAA	-1	NA	55773378	55738757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_90490.nic	chr8	-	1822	8	NIC	ENSG00000167904.16	novel	2573	8	NA	NA	5	155	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	37.4242091241943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAAATCCTTTAGCAGT	39	False	55773397	-5	True	AATAAA	-18	NA	55773373	55739545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773226
transcript_905.known	chr1	+	1443	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	-16	True	NA	12	True	AATAAA	-18	NA	15742498	15747982	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
transcript_90500.known	chr8	-	826	3	FSM	ENSG00000167904.16	ENST00000522576.5	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	65	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAATAAGAAAATTT	34	False	55773397	-84	True	ATTAAA	-29	NA	55773378	55762399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_55763029_55763935_55763981_55773226
transcript_90501.known	chr8	-	2400	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	21.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCATTTGAGTAGC	-24	True	NA	NA	False	ATTAAA	-18	NA	55773367	55760772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_55763029_55763935_55763981_55773268
transcript_90508.known	chr8	-	2401	6	FSM	ENSG00000167904.16	ENST00000334667.6	2401	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	49.3096339471305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	5	True	NA	-14	True	AATAAA	-1	NA	55773407	55738757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_55740219_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_90510.known	chr8	+	4477	13	FSM	ENSG00000137574.11	ENST00000260129.6	4477	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	18.2579891189218	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAAGTGTTCTAGTCT	-7	True	NA	NA	False	GATAAA	-38	NA	55773445	55826445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55810880_55811098_55813039_55813119_55824580
transcript_90520.known	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4094.84719562959	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56074510	56073053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
transcript_90521.known	chr8	-	1826	6	FSM	ENSG00000008988.11	ENST00000519807.5	1826	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4274.8806111984	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGTGAATAATGCTATA	NA	False	NA	-49	True	TTTAAA	-45	NA	56074509	56067294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56068531_56069702_56069834_56073116_56073273_56073694_56073769_56074059_56074160_56074380
transcript_90522.known	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_3	171.822259584982	14556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-1	True	NA	-14	True	AATAAA	-19	NA	56074506	56073053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
transcript_90523.known	chr8	-	424	3	FSM	ENSG00000008988.11	ENST00000519606.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4271.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGACCAGTTGTTA	-1	True	NA	-35	True	NA	NA	NA	56074506	56073074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56074059_56074160_56074380
transcript_90524.known	chr8	-	423	3	FSM	ENSG00000008988.11	ENST00000520627.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4477	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56074510	56073053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56073273_56073694_56073769_56074380
transcript_90528.known	chr8	+	552	6	FSM	ENSG00000170791.18	ENST00000521982.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	209.496157482661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAAGTGTTTATATA	0	True	NA	-8	True	NA	NA	NA	56211788	56217441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56216679_56216755_56217330
transcript_90529.known	chr8	+	703	5	FSM	ENSG00000170791.18	ENST00000521524.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	91.8517827807387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGCTTTTCCACTGGGT	21	False	NA	NA	False	NA	NA	NA	56211809	56217689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216507_56217330
transcript_90530.known	chr8	+	1670	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	212.473968993851	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	9	False	NA	17	True	AATAAA	-20	NA	56211797	56218619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
transcript_90533.known	chr8	+	1805	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	220.813694095271	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	9	False	NA	NA	False	NA	NA	NA	56211797	56218798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
transcript_90539.nic	chr8	+	1732	5	NIC	ENSG00000170791.18	novel	1684	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_3	205.56553091411	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	NA	False	NA	17	True	AATAAA	-20	NA	56211755	56218619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56217330
transcript_9054.known	chr1	-	1507	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	144.731648232168	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	669	False	NA	NA	False	AATAAA	-20	NA	193059409	193018404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_90542.known	chr8	+	1550	5	FSM	ENSG00000170791.18	ENST00000396723.9	1550	5	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	209.737186736163	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGAGTCTAAAACCAAG	10	False	NA	-78	True	AATGAA	-6	NA	56211798	56218524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56217330
transcript_90558.known	chr8	+	573	4	FSM	ENSG00000170791.18	ENST00000521831.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	202.000550054257	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTCAAGTGGAGA	NA	False	NA	54	True	NA	NA	NA	56211685	56217538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56214597_56214668_56216388_56216532_56217330
transcript_90562.known	chr8	+	1697	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	117.423260992966	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	0	True	NA	NA	False	NA	NA	NA	56211788	56218809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
transcript_90567.known	chr8	-	1251	4	FSM	ENSG00000181195.11	ENST00000451791.7	1251	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCCTTGTAAGTCTCT	0	True	NA	NA	False	AATAAA	-19	NA	56446641	56440956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_56441938_56445815_56445957_56446425_56446482_56446568
transcript_90570.known	chr8	+	4971	8	FSM	ENSG00000215114.10	ENST00000399598.7	4971	8	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_5	31.7753594690564	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGGTTTTTCAAATT	0	True	NA	13	True	AATAAA	-22	NA	58411360	58451501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58439632_58439771_58445906_58446069_58447388
transcript_90576.nic	chr8	+	841	6	ISM	ENSG00000215114.10	ENST00000523409.5	1225	9	-54	12578	-32	0	5prime_fragment	FALSE	canonical	3	73	junction_5	71.4769893042509	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTGGAGTTATTTC	NA	False	NA	NA	False	AATAAA	-27	NA	58411326	58435106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_90582.known	chr8	+	1277	9	FSM	ENSG00000137575.12	ENST00000424270.6	1277	9	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_2	341.223900100799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAACCAGTCACC	-13	True	NA	NA	False	NA	NA	NA	58553236	58582056	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58553304_58565018_58565067_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_90583.known	chr8	+	2073	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_4	95.6607776207156	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	11	True	NA	27	True	AATAAA	-19	NA	58553260	58582858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_90584.known	chr8	+	3589	10	FSM	ENSG00000137575.12	ENST00000523483.5	3589	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	457.733816659399	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	4	True	NA	27	True	AATAAA	-19	NA	58553253	58582858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_58553304_58560283_58561796_58565018_58565085_58570886_58570966_58572204_58572315_58575902_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_90586.known	chr8	-	3574	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_30	19.9805738989983	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTTTTCACTTTAT	-44	True	NA	NA	False	ATTAAA	-17	NA	58659853	58583507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_90587.known	chr8	-	582	6	FSM	ENSG00000035681.9	ENST00000522645.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	10.3266645147405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAAAATTACCCAAGGG	9	True	NA	NA	False	AATATA	-39	NA	58659698	58631364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_90588.known	chr8	-	4076	9	FSM	ENSG00000198846.6	ENST00000361421.2	4076	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.3888811036348	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGGTGATCCATCA	-10	True	NA	1	True	AATAAA	-44	NA	59119147	58805411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_58807784_58808117_58808270_58815337_58815725_58826821_58826903_58838080_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_90592.known	chr8	+	3207	2	FSM	ENSG00000167912.7	ENST00000665670.1	3207	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATGCAATAAGTAATATC	1	True	NA	NA	False	TTTAAA	-14	NA	59119221	59123478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_59119286_59120335
transcript_90594.known	chr8	+	1106	2	FSM	ENSG00000167912.7	ENST00000517898.1	1106	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTTTAAAAATAAAACTT	19	False	NA	-30	True	NA	NA	NA	59119945	59121315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_59120072_59120335
transcript_90596.known	chr8	-	568	3	FSM	ENSG00000251396.8	ENST00000532232.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATTACAATAAGCTGT	-17	True	NA	NA	False	NA	NA	NA	60516795	60468862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_60469117_60508646_60508763_60516597
transcript_90597.known	chr8	+	3735	8	FSM	ENSG00000104388.15	ENST00000262646.12	3735	8	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_5	92.5511441621025	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGATGTACTAGGTATTA	13	True	NA	24	True	AATAAA	-34	NA	60516986	60623644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_906.known	chr1	+	3314	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	0	0	0	0	multi-exon	TRUE	canonical	3	347	junction_1	52.8251833882288	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	1	True	NA	23	True	AATAAA	-21	NA	15758794	15786589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_90600.known	chr8	+	594	6	FSM	ENSG00000104388.15	ENST00000429861.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_5	96.2567400237511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTTCTGTCAGAC	53	False	NA	NA	False	CATAAA	-35	NA	60517235	60592117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857
transcript_90601.known	chr8	+	11606	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_14	32.4600333005063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	-3	True	NA	23	True	AATAAA	-30	NA	60678739	60868028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
transcript_90607.known	chr8	-	3730	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	115.168104558911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	8462	False	61714610	NA	False	AATAAA	-20	NA	61714596	61623709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_90608.nnic	chr8	-	2634	14	NNC	ENSG00000198363.18	novel	3730	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	145.048451403101	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATTGTCATTATTTTT	8413	False	NA	-14	True	AATAAA	-15	NA	61714645	61624538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714584
transcript_9061.nic	chr1	+	2219	10	NIC	ENSG00000116747.13	novel	8291	9	NA	NA	-57	0	intron_retention	FALSE	canonical	2	2	junction_2	39.0842710935433	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	768	False	NA	NA	False	AATGAA	-44	NA	193059396	193084866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_193059777_193069033_193069635_193070553_193070620_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_90610.known	chr8	-	1449	9	FSM	ENSG00000137563.13	ENST00000677482.1	1449	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	159.051681852158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTATGTGTGTGCATGTG	-36	True	NA	81	True	NA	NA	NA	63038867	63014880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_63015454_63017492_63017631_63023906_63023940_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_90611.known	chr8	-	1248	9	FSM	ENSG00000137563.13	ENST00000260118.7	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	38.7151052562175	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTCTAATTGATTTG	25	True	NA	-15	True	AATAAA	-17	NA	63038806	63015078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_90615.known	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	161.515779225361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	30	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_90616.known	chr8	+	2370	6	FSM	ENSG00000185728.17	ENST00000621413.4	2370	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	209.505703979629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGTAATTATGCAT	0	True	NA	NA	False	NA	NA	NA	63168660	63209955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_63168902_63169386_63169412_63172652_63172799_63175330_63175417_63186146_63187746_63209682
transcript_90619.known	chr8	+	5095	5	FSM	ENSG00000185728.17	ENST00000539294.6	5095	5	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	37.6397396377818	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	-5	True	NA	12	True	AATAAA	-14	NA	63168620	63212786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_63168902_63169386_63169412_63175330_63175417_63186146_63187746_63209682
transcript_90621.nnic	chr8	+	5016	5	NNC	ENSG00000185728.17	novel	5095	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	173.994791588714	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	-13	True	NA	12	True	AATAAA	-14	NA	63168612	63212786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_63168815_63169386_63169412_63175330_63175417_63186146_63187746_63209682
transcript_90623.known	chr8	-	3000	7	FSM	ENSG00000104442.10	ENST00000276569.8	3000	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	9.81070843517429	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTGTGGTATAAGCAT	-12	True	NA	-18	True	AATAAA	-32	NA	65634177	65602457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65613243_65613434_65622262_65622355_65627215_65627434_65633997
transcript_90631.nic	chr8	+	2728	9	NIC	ENSG00000066855.16	novel	2651	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	72.2736769162881	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	113	False	NA	16	True	AATAAA	-29	NA	65644690	65710562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_65644785_65669872_65670019_65682352_65682452_65689565_65689600_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
transcript_90636.known	chr8	+	2651	8	FSM	ENSG00000066855.16	ENST00000262146.9	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	16.6451561870052	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	10	True	NA	16	True	AATAAA	-29	NA	65644733	65710562	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
transcript_90641.known	chr8	-	6961	13	FSM	ENSG00000205268.11	ENST00000401827.8	6961	13	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	34.3725504177712	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATTAATGTGTTCCC	-1	True	NA	NA	False	AATAAA	-20	NA	65842064	65714333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
transcript_90643.known	chr8	+	2229	14	FSM	ENSG00000147576.17	ENST00000424777.6	2229	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11.8061261802767	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	2	True	NA	13	True	AATAAA	-14	NA	66432497	66468809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_90654.known	chr8	+	1720	1	FSM	ENSG00000179041.4	ENST00000320270.4	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACTGGGTAGA	-47	True	NA	34	True	AATAAA	-27	NA	66429013	66430733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66429000_66430700
transcript_90655.known	chr8	-	9956	3	FSM	ENSG00000175073.8	ENST00000310421.5	9956	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTTAATTGATTTT	-8	True	NA	2	True	ATTAAA	-22	NA	66667231	66628486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66635373_66651457_66651545_66664248
transcript_90657.known	chr8	+	598	4	FSM	ENSG00000288596.2	ENST00000521889.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	12.2565175405668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	53	False	NA	6	True	AATAAA	-15	NA	66667651	66678295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66667702_66676744_66676903_66677641_66677955_66678218
transcript_90661.nic	chr8	+	1008	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-146	0	-109	0	intron_retention	FALSE	canonical	3	19	junction_2	8	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	322	False	NA	6	True	AATAAA	-15	NA	66667505	66678295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_66667702_66676744_66676903_66677641
transcript_90662.known	chr8	+	1835	3	FSM	ENSG00000288596.2	ENST00000661636.1	1835	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTATATTACAAAGAAT	19	True	NA	NA	False	AAAAAG	-9	NA	66667617	66681158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66667702_66677641_66677955_66679720
transcript_90664.known	chr8	+	575	3	FSM	ENSG00000288596.2	ENST00000521113.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	16	True	NA	18	True	AATAAA	-19	NA	66667614	66685564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66667702_66679720_66680025_66685380
transcript_90665.nic	chr8	+	778	2	ISM	ENSG00000288596.2	ENST00000661636.1	1835	3	-40	2863	-37	0	5prime_fragment	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	-21	True	NA	6	True	AATAAA	-15	NA	66667577	66678295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_66667702_66677641
transcript_90666.known	chr8	+	4106	17	FSM	ENSG00000104205.16	ENST00000521198.7	4106	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	16.593955978006	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGTCATTATTTG	11	True	NA	6	True	AATAAA	-18	NA	66712780	66862022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66712834_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_90668.known	chr8	+	4190	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	9.06831709855803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	-40	True	NA	4	True	AATAAA	-16	NA	66775180	66862020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_90675.known	chr8	-	638	4	FSM	ENSG00000245910.9	ENST00000520944.6	639	4	1	0	1	0	multi-exon	FALSE	canonical	3	693	junction_3	105.738671576045	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGGAGACATTGCTT	NA	False	NA	94	True	NA	NA	NA	66925596	66921817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66925436
transcript_90679.known	chr8	-	302	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	60	0	-1	multi-exon	FALSE	canonical	3	197	junction_2	312	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGCTAACTTTTAAT	-3	True	NA	-75	True	AATAAA	-17	NA	66925541	66921986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922115_66922323_66922393_66925436
transcript_90681.known	chr8	-	648	3	FSM	ENSG00000245910.9	ENST00000686474.1	1806	3	35	1123	0	134	multi-exon	FALSE	canonical	3	45	junction_1	324	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCACCTTTTTTATTCA	-3	True	NA	NA	False	GATAAA	-1	NA	66925541	66921683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922115_66922613_66922726_66925436
transcript_90686.known	chr8	-	560	2	FSM	ENSG00000245910.9	ENST00000521127.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGGTGGGGGCAG	-3	True	NA	NA	False	NA	NA	NA	66925541	66922270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_66922726_66925436
transcript_90695.known	chr8	+	4476	30	FSM	ENSG00000104218.16	ENST00000262210.11	4476	30	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	17.1753217313535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAACTACTATGGAG	4956	False	NA	8	True	AATAAA	-22	NA	67064339	67196263	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_90698.known	chr8	+	4348	29	FSM	ENSG00000104218.16	ENST00000675869.1	4348	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	19.9219138905183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTAAAATCTTTTTAA	4962	False	NA	-3	True	AATAAA	-11	NA	67064345	67196252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_907.known	chr1	-	2720	16	FSM	ENSG00000116809.12	ENST00000375743.9	2720	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	10.0456734744643	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-11	True	NA	-3	True	AATAAA	-17	NA	15976101	15941868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_9070.known	chr1	+	8291	9	FSM	ENSG00000116747.13	ENST00000400968.7	8291	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	17.4243902332334	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	-18	True	NA	NA	False	NA	NA	NA	193059611	193091219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_90707.known	chr8	+	4291	28	FSM	ENSG00000104218.16	ENST00000675306.2	4291	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	17.0887299515799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAATTACTAAAATCT	4932	False	NA	-9	True	AATAAA	-5	NA	67064315	67196246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_90709.known	chr8	+	4399	24	FSM	ENSG00000104218.16	ENST00000677619.1	4399	24	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_6	16.5210526173159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGTGGAGCACTTACC	-23	True	NA	NA	False	ATTAAA	-15	NA	67064361	67196778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_90710.known	chr8	+	3822	25	FSM	ENSG00000104218.16	ENST00000678318.1	3822	25	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	19.9457597833057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTTTATGCCAATGAA	-17	True	NA	-87	True	NA	NA	NA	67064367	67196168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_90721.known	chr8	+	2489	19	FSM	ENSG00000104218.16	ENST00000678362.1	2489	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	15.1029389667077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAAGAAGAAGAA	14	True	NA	NA	False	AAAAAG	-10	NA	67064398	67159051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112076_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990
transcript_90729.nic	chr8	-	1415	9	NIC	ENSG00000121022.14	novel	1451	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	201.007112747286	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	67062333	67043078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853_67062025_67062105
transcript_9073.known	chr1	+	7848	8	FSM	ENSG00000116747.13	ENST00000432079.5	7848	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	30.3711732283313	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	0	True	NA	NA	False	NA	NA	NA	193059453	193091219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193059777_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_90732.known	chr8	-	1296	8	FSM	ENSG00000121022.14	ENST00000357849.9	1296	8	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	26.1080955464244	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	5	True	NA	NA	False	AATAAA	-17	NA	67062133	67043078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853
transcript_90739.known	chr8	-	400	3	FSM	ENSG00000178125.15	ENST00000520633.1	400	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGGATTTGTTCTAA	16	True	NA	NA	False	AATAAA	-17	NA	67028537	67010617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67010832_67012957_67013097_67028490
transcript_9074.known	chr1	+	1474	7	FSM	ENSG00000116747.13	ENST00000460715.2	1474	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.1927709172242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATTAAATTATGAATGA	-7	True	NA	NA	False	NA	NA	NA	193059622	193085235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193059777_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_90741.known	chr8	-	7320	39	FSM	ENSG00000066777.9	ENST00000262215.8	7320	39	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_29	41.0610399621111	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	2	True	NA	-14	True	AATAAA	-33	NA	67343781	67197657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_90744.known	chr8	+	1113	1	FSM	ENSG00000271966.1	ENST00000607397.1	1113	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATTTCTTTTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	67343974	67345087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67344000_67345100
transcript_90745.known	chr8	+	550	2	FSM	ENSG00000255130.1	ENST00000526382.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGCAGTCTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	67732586	67735665	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_67732666_67735194
transcript_90749.nic	chr8	+	1043	3	ISM	ENSG00000046889.19	ENST00000529398.5	3612	24	-1	85657	-1	-85657	5prime_fragment	FALSE	canonical	3	86	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTGCTACGTATA	-30	True	NA	NA	False	ACTAAA	-31	NA	67952366	68020350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_67952536_68017845_68017918_68019548
transcript_9075.known	chr1	-	682	4	FSM	ENSG00000023572.10	ENST00000367439.8	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	8.33999733546454	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCACTTGCCAATTC	0	True	NA	-25	True	AATAAA	-17	NA	193105414	193096469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105263
transcript_90751.known	chr8	-	2842	3	FSM	ENSG00000248801.7	ENST00000660308.1	2842	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCATTATGAAATG	NA	False	NA	-15	True	AATGAA	-9	NA	68331511	68302245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_68304802_68306517_68306599_68331306
transcript_90758.known	chr8	+	828	2	FSM	ENSG00000246528.4	ENST00000501104.3	1315	2	24	463	21	-462	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACATTCAGCAAGAAGC	-9	True	NA	NA	False	AAAAAG	-42	NA	69834110	69837370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_69834207_69836638
transcript_90759.known	chr8	+	1256	2	FSM	ENSG00000246528.4	ENST00000528800.3	1298	2	39	3	-24	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTTCCTGATCTTC	9	True	NA	NA	False	AATAAA	-21	NA	69834128	69837829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_69834194_69836638
transcript_90762.nnic	chr8	-	2439	7	NIC	ENSG00000147596.4	novel	2269	8	NA	NA	-56	838	combination_of_known_splicesites	FALSE	canonical	3	45	junction_6	91.6468160324672	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAACTAGCCA	6723	False	NA	NA	False	NA	NA	NA	70071308	70050812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70071149
transcript_90765.nic	chr8	-	2586	11	ISM	ENSG00000140396.13	ENST00000452400.7	8430	23	-188	46370	-188	-181	5prime_fragment	FALSE	canonical	3	25	junction_10	11.8894911581615	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAGAGAATGCACTAC	9	True	NA	NA	False	ATTAAA	-21	NA	70403996	70156151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403699
transcript_9077.known	chr1	+	1791	8	FSM	ENSG00000116747.13	ENST00000367441.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	18.3358687176979	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	8874	False	NA	NA	False	AATGAA	-44	NA	193069015	193084866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_90770.known	chr8	-	3056	11	FSM	ENSG00000067167.8	ENST00000262213.7	3056	11	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	67.9694784443724	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGTGTCTCTTTATT	-1	True	NA	NA	False	AATAAA	-26	NA	70608416	70573217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_90776.known	chr8	-	1526	7	FSM	ENSG00000147592.9	ENST00000276590.5	1526	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	33.304987948087	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGATAAATAATTATT	-3	True	NA	94	True	ATTAAA	-17	NA	70669185	70637265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_9078.known	chr1	+	5869	17	FSM	ENSG00000134371.14	ENST00000367435.5	5869	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_8	36.754623433658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTCATGCTATGTCG	9	True	NA	31	True	AATAAA	-28	NA	193122030	193254815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193249729_193249872_193250675
transcript_90782.nic	chr8	-	932	6	ISM	ENSG00000147592.9	ENST00000276590.5	1526	7	-57	1295	-57	-10	5prime_fragment	FALSE	canonical	3	206	junction_1	25.9568873326522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAAAATATGTGAGTA	-1	True	NA	NA	False	NA	NA	NA	70669242	70638560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_90788.known	chr8	+	3200	5	FSM	ENSG00000221947.8	ENST00000408926.8	3200	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	2.48746859276655	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-32	True	NA	NA	False	AATAAA	-23	NA	70669338	70735942	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_70669539_70674817_70674900_70680780_70681331_70706932_70707154_70733795
transcript_90790.nnic	chr8	+	646	4	NIC	ENSG00000254277.2	novel	473	3	NA	NA	-53	-1	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	35.3679076125361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTGGAAACAACAAAAATG	NA	False	NA	NA	False	AGTAAA	-14	NA	71675246	71702434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_71675536_71695940_71696034_71697626_71697671_71702214
transcript_90792.nnic	chr8	+	1890	4	NIC	ENSG00000254277.2	novel	473	3	NA	NA	-53	892	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	35.3679076125361	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTTGTTTTTGTTTGTT	NA	False	NA	31	True	GATAAA	-15	NA	71675246	71703678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_71675536_71695940_71696034_71697626_71697671_71702214
transcript_90798.known	chr8	+	473	3	FSM	ENSG00000254277.2	ENST00000521131.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	50.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAAACAACAAAAATGT	23	False	NA	NA	False	AGTAAA	-15	NA	71675376	71702435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71695940_71696034_71702214
transcript_908.known	chr1	-	2770	16	FSM	ENSG00000116809.12	ENST00000375733.6	2770	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	18.4190722410827	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	NA	False	NA	-5	True	AATAAA	-15	NA	15976132	15941870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15942253_15942330_15942442_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_90801.nnic	chr8	+	517	3	FSM	ENSG00000254277.2	ENST00000693596.1	452	3	-66	1	-17	-1	multi-exon	FALSE	canonical	3	73	junction_1	36	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTGGAAACAACAAAAATG	-3	True	NA	NA	False	AGTAAA	-14	NA	71675282	71702434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71697626_71697671_71702214
transcript_90806.nnic	chr8	+	1454	3	FSM	ENSG00000254277.2	ENST00000691315.1	1454	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGTTTGGCCTATTT	63	False	NA	6	True	AATAAA	-19	NA	71675348	71756667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71753654_71753739_71755484
transcript_90810.known	chr8	+	808	2	FSM	ENSG00000254277.2	ENST00000519840.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTGTGTTTTCAGT	14	False	NA	NA	False	NA	NA	NA	71675299	71702786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_71675536_71702214
transcript_90819.known	chr8	-	5191	27	FSM	ENSG00000104321.11	ENST00000262209.5	5191	27	0	0	0	0	multi-exon	FALSE	canonical	2	73	junction_20	15.7651026491571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCACCAACCTGTACT	-1	True	NA	-32	True	AATAAA	-16	NA	72075584	72021249	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_72023117_72023813_72023912_72025959_72026074_72029900_72029970_72033643_72033827_72034247_72034378_72036287_72036458_72037982_72038073_72038864_72039028_72039726_72039798_72046512_72046609_72047147_72047208_72050777_72050872_72052598_72052766_72053752_72053868_72055435_72055601_72055685_72055856_72056916_72057018_72057716_72057817_72059389_72059439_72061624_72061762_72062798_72062945_72063462_72063572_72065450_72065559_72069022_72069199_72071710_72071868_72075298
transcript_90821.nnic	chr8	-	2465	11	NNC	ENSG00000104321.11	novel	5191	27	NA	NA	766	923	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	36.7009536660834	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTATCCCTGTGATTAT	NA	False	NA	-16	True	AATAAA	-12	NA	72040579	72022205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_72023117_72023813_72023912_72025959_72026074_72029900_72029970_72033643_72033827_72034247_72034378_72036287_72036458_72037982_72038073_72038864_72039028_72039726_72039798_72040113
transcript_90828.known	chr8	+	2764	11	FSM	ENSG00000147601.15	ENST00000679115.1	2764	11	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_9	3471.85651921274	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	-11	True	NA	-22	True	AATAAA	-7	NA	73008859	73047479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73039544_73039620_73045960
transcript_90834.known	chr8	+	3329	10	FSM	ENSG00000147601.15	ENST00000276603.10	3329	10	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_7	2548.68935574714	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCAGTCTGAGTATT	-7	True	NA	3	True	AATATA	-15	NA	73008863	73048123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
transcript_90837.known	chr8	+	2715	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	3285.44899688172	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	-7	True	NA	-22	True	AATAAA	-7	NA	73008863	73047479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
transcript_90842.known	chr8	+	2933	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	3317.8160152593	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCTATATATAAACAGAA	-7	True	NA	-13	True	NA	NA	NA	73008863	73047711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_90846.known	chr8	+	3268	9	FSM	ENSG00000147601.15	ENST00000276602.10	3268	9	0	0	0	0	multi-exon	FALSE	canonical	3	5990	junction_6	809.648756792104	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	-7	True	NA	2	True	AATATA	-14	NA	73008863	73048122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_90854.nic	chr8	+	1145	8	ISM	ENSG00000147601.15	ENST00000677031.1	1934	10	-81	10643	-73	3658	5prime_fragment	FALSE	canonical	3	2122	junction_7	2775.75332668669	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTGTTATAACAGTTT	2348	False	NA	27	True	AAGAAA	-28	NA	73008782	73032135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041
transcript_9086.nic	chr1	+	1396	14	ISM	ENSG00000134371.14	ENST00000649895.1	2364	16	41	4636	-7	-4636	5prime_fragment	FALSE	canonical	3	294	junction_8	35.7559114986682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGACCAGATGCAA	2	True	NA	NA	False	AATACA	-3	NA	193122023	193233057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992
transcript_90862.nic	chr8	+	1085	7	ISM	ENSG00000147601.15	ENST00000678860.1	2715	10	-81	15344	-73	3658	5prime_fragment	FALSE	canonical	3	5990	junction_6	916.328483071922	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTGTTATAACAGTTT	2348	False	NA	27	True	AAGAAA	-28	NA	73008782	73032135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041
transcript_90878.known	chr8	+	4052	4	FSM	ENSG00000147601.15	ENST00000678358.1	4052	4	0	0	0	0	multi-exon	FALSE	canonical	3	8043	junction_1	360.674676436012	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGATTGCGCCACT	-15	True	NA	NA	False	NA	NA	NA	73008855	73025699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215
transcript_90885.known	chr8	+	2331	6	FSM	ENSG00000147601.15	ENST00000522018.2	2331	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_5	3316.29190512536	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCACTCCCAGCTTAAAA	-7	True	NA	NA	False	AATAAA	-8	NA	73008863	73028477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026943
transcript_90889.known	chr8	-	1233	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	0	0	0	multi-exon	FALSE	canonical	3	19042	junction_1	4694.5917968327	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTCTTGTTTTGC	-6	True	NA	1	True	TATAAA	-38	NA	73293633	73290241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
transcript_9089.nic	chr1	-	1968	9	ISM	ENSG00000162687.19	ENST00000609185.5	3622	27	-532	201151	-331	63252	5prime_fragment	TRUE	canonical	2	14	junction_8	6.84539078504653	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAACATGGTATGTAA	NA	False	NA	NA	False	NA	NA	NA	196608891	196429009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
transcript_90890.nic	chr8	-	1403	7	NIC	ENSG00000147604.14	novel	1233	7	NA	NA	-31	-357	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	11438.0258737637	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTGTATTTGTGAT	0	True	NA	-25	True	AATAAA	-24	NA	73294469	73290640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293865
transcript_90896.known	chr8	-	1526	6	FSM	ENSG00000147604.14	ENST00000396467.5	1526	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	12349.8789241029	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGCCATGTAAATGT	-6	True	NA	23	True	NA	NA	NA	73293633	73290283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292796_73293598
transcript_909.nic	chr1	-	2537	15	NIC	ENSG00000116809.12	novel	2720	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	21.0432014325438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-6	True	NA	-3	True	AATAAA	-17	NA	15976125	15941868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15973038_15973126_15975982
transcript_90900.nic	chr8	-	3030	15	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	174.526136864882	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	667	False	NA	0	True	AGTAAA	-24	NA	73746917	73420368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_73421466_73422613_73422703_73527690_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90901.known	chr8	-	2970	15	FSM	ENSG00000040341.18	ENST00000524300.6	2970	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	161.581027882077	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	0	True	NA	0	True	AGTAAA	-24	NA	73746840	73420368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_90905.nic	chr8	-	2916	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	115.76859187148	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	667	False	NA	0	True	AGTAAA	-24	NA	73746917	73420368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90907.nic	chr8	-	2326	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	115.76859187148	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGCTTGACAATTCGAAA	667	False	NA	-60	True	NA	NA	NA	73746917	73420958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90908.nic	chr8	-	2246	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-14	-80	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	115.76859187148	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGTTTGGTTCTGTTGT	667	False	NA	-140	True	AATAGA	-4	NA	73746917	73421038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90914.nic	chr8	-	2700	13	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	-14	534	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	123.179718523609	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	667	False	NA	-3	True	AATAAA	-17	NA	73746917	73526834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_9092.known	chr1	+	600	3	FSM	ENSG00000203724.11	ENST00000367393.8	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACAAATGTTTGTGTGT	0	True	NA	NA	False	AATAAA	-9	NA	197902629	197907362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_197902914_197905795_197905898_197907148
transcript_90922.known	chr8	-	4061	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_9	30.2559330975481	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	0	True	NA	-20	True	AGTAAA	-23	NA	73746840	73549603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90935.known	chr8	-	1695	10	FSM	ENSG00000040341.18	ENST00000517542.5	1695	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	156.517738512719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATCTATCTAGTAAT	705	False	NA	NA	False	AAAAAG	-29	NA	73746879	73551829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73746782
transcript_90939.known	chr8	-	1041	7	FSM	ENSG00000040341.18	ENST00000522962.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	205.695905539113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTACAGTTAACCA	766	False	NA	NA	False	AGTAAA	-8	NA	73746818	73653497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_9094.known	chr1	+	4114	10	FSM	ENSG00000151414.15	ENST00000367385.9	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	14.2499729261168	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGGTATCTATGATTT	-33	True	NA	NA	False	AATAAA	-17	NA	198156997	198322420	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_198157277_198232552_198232638_198253039_198253181_198262574_198262638_198264124_198264236_198277960_198278070_198278953_198279062_198292944_198293040_198297126_198297241_198319411
transcript_90940.known	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	174.966968311164	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	0	True	NA	NA	False	ATTAAA	-29	NA	73746840	73652256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_90946.known	chr8	-	2268	7	FSM	ENSG00000104343.21	ENST00000651945.1	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	130.967871378187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAATTAAAAC	-12	True	NA	-34	True	NA	NA	NA	73878862	73792362	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73870268_73870302_73878807
transcript_9095.known	chr1	-	630	4	FSM	ENSG00000151418.12	ENST00000281087.6	630	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGCTATATCTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	198540945	198523223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_198523565_198529080_198529182_198540568_198540686_198540874
transcript_90950.known	chr8	-	8426	6	FSM	ENSG00000104343.21	ENST00000517608.5	8426	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	33.8762453645619	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTTGGCTTTTTTTA	NA	False	NA	-1	True	AATAAA	-17	NA	73878910	73786219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_90952.known	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	110.141670134423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-25	True	NA	-22	True	AATAAA	-24	NA	73878875	73790604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
transcript_90958.known	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1812.34544168599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	385	False	NA	45	True	NA	NA	NA	73971908	73946533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
transcript_9096.known	chr1	-	556	3	FSM	ENSG00000151418.12	ENST00000367382.6	556	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTATATCTTTTCTA	7	True	NA	NA	False	ATTAAA	-16	NA	198540680	198523221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_198523565_198529080_198529182_198540568
transcript_90964.known	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	1786.51201717201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	1	True	NA	-121	True	NA	NA	NA	73972252	73946699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
transcript_90965.known	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1873.80401856758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-3	True	NA	-82	True	NA	NA	NA	73972232	73946472	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
transcript_9097.nnic	chr1	-	423	3	FSM	ENSG00000203721.8	ENST00000688178.1	408	3	-18	3	-6	-3	multi-exon	FALSE	canonical	3	7	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTTTTC	529	False	NA	NA	False	AATAAA	-13	NA	200374149	200342546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200342758_200373092_200373170_200374014
transcript_90976.known	chr8	-	1976	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-28	0	-19	multi-exon	FALSE	canonical	3	9	junction_4	1882.54978353827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	385	False	NA	NA	False	NA	NA	NA	73971908	73945137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
transcript_90985.known	chr8	-	2015	4	FSM	ENSG00000154582.18	ENST00000520242.6	2015	4	0	0	0	0	multi-exon	FALSE	canonical	3	2603	junction_3	572.278681141355	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-9	True	NA	NA	False	NA	NA	NA	73972191	73945118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972076
transcript_90986.known	chr8	-	1943	4	FSM	ENSG00000154582.18	ENST00000518127.5	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_3	1487.21372595423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	6	True	NA	NA	False	NA	NA	NA	73972287	73945118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972244
transcript_90987.known	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	1743.06250286353	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	187	False	NA	-10	True	AATAAA	-13	NA	73972106	73946400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
transcript_90994.known	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	1926.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	12	True	NA	7	True	AATAAA	-37	NA	73972170	73945607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_73946821_73955910_73956055_73972076
transcript_90998.known	chr8	+	2032	3	FSM	ENSG00000175606.11	ENST00000312184.6	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	13	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTAAAATTGCTGTC	-22	True	NA	8	True	ATTAAA	-14	NA	73976194	73982783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_73976492_73978755_73978862_73981154
transcript_91.known	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	2103	junction_1	469	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_4568_4780_6057
transcript_910.nic	chr1	-	1382	2	ISM	ENSG00000116809.12	ENST00000479282.5	1054	5	-21	26041	7	-25954	5prime_fragment	FALSE	canonical	3	69	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGACTATTAATTTTCC	-6	True	NA	21	True	NA	NA	NA	15976125	15971886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_15973126_15975982
transcript_91001.known	chr8	+	2471	7	FSM	ENSG00000104381.14	ENST00000434412.3	2471	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.0213785720833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTAGCAGCTTTTATAA	-24	True	NA	NA	False	AATAAA	-31	NA	74350402	74365834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351322_74351453_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_91003.known	chr8	+	3326	6	FSM	ENSG00000104381.14	ENST00000674973.1	3326	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	93.8262223474866	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTAAAACAAAGTACTCA	-24	True	NA	0	True	AATAAA	-23	NA	74350402	74366863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351322_74360136_74360150_74361883_74361979_74362938_74363054_74363984
transcript_91004.known	chr8	+	3500	6	FSM	ENSG00000104381.14	ENST00000675625.1	3500	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	71.0194339600084	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTACTCACTTTG	-32	True	NA	5	True	AATAAA	-28	NA	74350394	74366868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_91007.known	chr8	+	3616	6	FSM	ENSG00000104381.14	ENST00000675165.1	3616	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	72.2595322431581	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATGAACCCTAA	-24	True	NA	-13	True	AATAAA	-10	NA	74350402	74366850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363987
transcript_91010.known	chr8	+	945	6	FSM	ENSG00000104381.14	ENST00000676207.1	945	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	72.2595322431581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	-14	True	NA	NA	False	AATAAA	-25	NA	74350412	74488879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74488677
transcript_91012.known	chr8	+	3606	5	FSM	ENSG00000104381.14	ENST00000675821.1	3606	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	90.3410205831216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAACCCTAAAACAAAG	NA	False	NA	-6	True	AATAAA	-17	NA	74320612	74366857	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74320962_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_91015.known	chr8	+	4456	5	FSM	ENSG00000104381.14	ENST00000674926.1	4456	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	79.3867117343954	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAACAAAGTACTCACT	-31	True	NA	2	True	AATAAA	-25	NA	74350395	74366865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74363054_74363984
transcript_91017.known	chr8	+	2378	5	FSM	ENSG00000104381.14	ENST00000675928.1	2378	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	87.086164228309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCCCGATTTACAAAAAA	-32	True	NA	NA	False	NA	NA	NA	74350394	74365775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74350579_74351273_74351467_74361883_74361979_74362938_74363054_74363984
transcript_91020.known	chr8	+	3407	5	FSM	ENSG00000104381.14	ENST00000675220.1	3407	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	89.9260112536968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATTGGAAAATAAATAT	225	False	NA	-22	True	AATAAA	-1	NA	74321079	74366841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74321246_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_91025.known	chr8	+	4297	15	FSM	ENSG00000121005.9	ENST00000262207.9	4297	15	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	38.0053701898206	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCATTGTAATTATTT	0	True	NA	30	True	ATTAAA	-27	NA	74984504	75034558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564_75016706_75016880_75016942_75017046_75017114_75017319_75017451_75019869_75019914_75020006_75020080_75025545_75025622_75029386_75029518_75032190
transcript_91032.known	chr8	-	1484	3	FSM	ENSG00000249395.4	ENST00000675897.1	1484	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTCTATAGCTAA	NA	False	NA	-44	True	AATAAA	-12	NA	75324711	75223134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75224359_75324220_75324334_75324564
transcript_91034.known	chr8	-	1218	2	FSM	ENSG00000249395.4	ENST00000654852.2	1218	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCCAAGCGACATCATT	NA	False	NA	NA	False	AATAAA	-12	NA	75324741	75223317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75224359_75324564
transcript_91035.known	chr8	-	1704	2	FSM	ENSG00000249395.4	ENST00000669950.1	1704	2	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	NA	False	NA	-36	True	AATAAA	-20	NA	75324692	75223126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_75224359_75324220
transcript_91037.known	chr8	-	4169	4	FSM	ENSG00000164751.15	ENST00000357039.9	4169	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	21.3124898175277	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTATTATTTTGATAG	25	True	NA	NA	False	AATAAA	-23	NA	77000078	76980257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_76984196_76986186_76986297_76988306_76988339_76999989
transcript_91041.known	chr8	-	1627	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	88.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATTCTAAAGATAAAG	649	False	NA	-38	True	AAAACA	-3	NA	77000267	76982956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_76984196_76986186_76986297_76999989
transcript_91044.known	chr8	-	1470	3	FSM	ENSG00000164751.15	ENST00000520103.5	1470	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGACTCTGGGATGAGT	NA	False	NA	-15	True	GATAAA	-5	NA	77000947	76982933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_76984196_76999989_77000133_77000882
transcript_91045.known	chr8	+	3962	4	FSM	ENSG00000171033.13	ENST00000396418.7	3962	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	60.0351748745868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	2	True	NA	10	True	ATTAAA	-25	NA	78516339	78605267	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78516469_78572810_78572940_78598357_78598536_78601741
transcript_91047.known	chr8	+	1736	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	17	True	NA	-17	True	NA	NA	NA	78516354	78603185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78516469_78598357_78598536_78601741
transcript_91049.known	chr8	-	2016	6	FSM	ENSG00000104432.14	ENST00000263851.9	2016	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCCAGATTCAGTTAAT	-7	True	NA	NA	False	AATAAA	-16	NA	78805463	78732771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_78733833_78736473_78736528_78738503_78738636_78740001_78740083_78798071_78798209_78804912
transcript_91050.known	chr8	-	456	5	FSM	ENSG00000104432.14	ENST00000520269.5	456	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTATCTGCTTATGC	593	False	NA	NA	False	AATATA	-28	NA	78804928	78733664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_78733833_78736473_78736528_78740001_78740083_78798071_78798209_78804912
transcript_91052.nic	chr8	+	1191	10	NIC	ENSG00000104427.12	novel	3310	9	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	54.4958940575875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAGCCAA	-16	True	NA	NA	False	AATAGA	-5	NA	78666061	78717502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78711989_78712107_78715220_78715329_78717327
transcript_91053.nic	chr8	+	1389	10	NIC	ENSG00000104427.12	novel	3310	9	NA	NA	-27	198	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	54.4958940575875	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTGTCATTCAAGGAAA	-16	True	NA	12	True	AATAAA	-15	NA	78666061	78717700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78711989_78712107_78715220_78715329_78717327
transcript_91058.known	chr8	+	3310	9	FSM	ENSG00000104427.12	ENST00000263849.9	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	21.0531321897717	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTTCGTATTCACTGA	11	True	NA	13	True	AATAAA	-18	NA	78666088	78719765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220_78715329_78717327
transcript_9106.nnic	chr1	+	657	3	FSM	ENSG00000230623.7	ENST00000692619.1	501	3	-156	0	3	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	-3	True	NA	11	True	AATAAA	-22	NA	200411669	200415550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200412585_200412764_200415364
transcript_91065.nic	chr8	+	1792	5	ISM	ENSG00000104427.12	ENST00000263849.9	3310	9	-27	29191	-27	-6931	5prime_fragment	FALSE	canonical	3	114	junction_4	14.2543852901484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCCATTCTTGATTT	-16	True	NA	NA	False	NA	NA	NA	78666061	78690574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221
transcript_91066.known	chr8	+	981	3	FSM	ENSG00000104427.12	ENST00000521873.1	981	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	3	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTCCCATGTGCTTTA	11	True	NA	NA	False	NA	NA	NA	78666088	78679390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_78666165_78675786_78675864_78678562
transcript_91067.known	chr8	+	1903	5	FSM	ENSG00000104435.14	ENST00000220876.12	1903	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	5.59016994374947	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTGGTCTGTTCTC	0	True	NA	13	True	AATAAA	-23	NA	79611116	79666158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_91069.known	chr8	+	585	5	FSM	ENSG00000104435.14	ENST00000518491.1	585	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.4727649331796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTCTGGCACGCCCCAC	-7	True	NA	NA	False	NA	NA	NA	79611734	79664881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_79611792_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_91071.known	chr8	-	2296	5	FSM	ENSG00000164683.18	ENST00000337919.9	2296	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGTGGTGTATGTCT	-3	True	NA	NA	False	AATAAA	-15	NA	79767857	79764012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79765772_79766650_79766733_79766996_79767093_79767218_79767295_79767574
transcript_91074.known	chr8	-	487	4	FSM	ENSG00000147586.10	ENST00000518271.1	487	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	193.31896498332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTGCGGCTATTAGATC	31	False	NA	NA	False	NA	NA	NA	80030232	79919124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80028694_80028797_80030053
transcript_9108.known	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	376	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	-7	True	NA	1	True	AATAAA	-20	NA	200411799	200475513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200473908
transcript_91082.known	chr8	-	555	3	FSM	ENSG00000147586.10	ENST00000519386.5	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	203.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	-1	True	NA	-5	True	AATAAA	-23	NA	80029839	79918854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80029760
transcript_91083.known	chr8	-	403	3	FSM	ENSG00000147586.10	ENST00000519120.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	174.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAATGAACTTTGCT	-24	True	NA	NA	False	AGTAAA	-29	NA	80029964	79918987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80029904
transcript_91084.known	chr8	-	838	3	FSM	ENSG00000147586.10	ENST00000276585.9	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	98	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	4	True	NA	0	True	AATAAA	-21	NA	80030259	79918716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80002998_80003181_80030035
transcript_91085.nnic	chr8	-	851	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_2	141.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	NA	False	NA	0	True	AATAAA	-21	NA	80030290	79918716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_79919149_80002998_80003181_80030053
transcript_91093.nnic	chr8	-	713	3	NIC	ENSG00000147586.10	novel	555	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_2	141.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	NA	False	NA	-5	True	AATAAA	-23	NA	80030290	79918854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_79919149_80002998_80003181_80030053
transcript_91094.known	chr8	-	437	2	FSM	ENSG00000147586.10	ENST00000521605.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTGACTCCTTTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	80030289	79918965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_79919149_80030035
transcript_91097.known	chr8	-	584	7	FSM	ENSG00000076554.16	ENST00000518517.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	421.06557947928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGGCTGCAAATGCTAG	2	True	NA	NA	False	NA	NA	NA	80171471	80038184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80119814_80119885_80171424
transcript_91099.known	chr8	-	4041	6	FSM	ENSG00000076554.16	ENST00000379096.9	4041	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	340.64961470696	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGATCTTTCACTTT	-21	True	NA	0	True	AATACA	-23	NA	80171558	80034744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
transcript_911.known	chr1	-	2511	15	FSM	ENSG00000116809.12	ENST00000537142.5	2511	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	26.9171063126202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	11	True	NA	-5	True	AATAAA	-15	NA	15976079	15941870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946317_15946934_15947124_15973038_15973126_15975982
transcript_91104.known	chr8	+	676	4	FSM	ENSG00000164687.11	ENST00000297258.11	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	1614	junction_2	108.369737473153	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTGTATGCATTCTT	0	True	NA	NA	False	AATAAA	-19	NA	81280535	81284775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_81280675_81283365_81283539_81283872_81283975_81284513
transcript_91106.known	chr8	+	986	4	FSM	ENSG00000164687.11	ENST00000396359.1	986	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	826.827000580465	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTATGCATTCTTTA	331	False	NA	NA	False	AATAAA	-21	NA	81280866	81284777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_81281314_81283365_81283539_81283872_81283975_81284513
transcript_91108.known	chr8	-	1180	10	FSM	ENSG00000133731.10	ENST00000449740.6	1180	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	85.8082847305262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAAATTCTCTTTGTCC	22	True	NA	NA	False	NA	NA	NA	81686283	81659261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81685762_81685964_81686251
transcript_91111.known	chr8	-	3369	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	22.2696542406926	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATTGTGTTCATTCTAT	-20	True	NA	NA	False	CATAAA	-44	NA	81686325	81656913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_91113.known	chr8	-	1106	8	FSM	ENSG00000133731.10	ENST00000311489.8	1106	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	77.4111735857193	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAAATTTTGACTTAG	4	True	NA	NA	False	NA	NA	NA	81686301	81659043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81659467_81660515_81660668_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_91114.known	chr8	-	1006	9	FSM	ENSG00000104231.11	ENST00000519464.5	1006	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	143.045392708049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTTTTTGGTTTTAA	11	True	NA	-26	True	TTTAAA	-15	NA	81721287	81702543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81708787_81708830_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_91118.known	chr8	-	1778	8	FSM	ENSG00000104231.11	ENST00000523096.5	1778	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	115.819705066248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	-2	True	NA	-18	True	AATAAA	-14	NA	81721300	81701721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703104_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_9112.known	chr1	+	319	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	163	1	4	0	multi-exon	FALSE	canonical	3	277	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	23	False	NA	11	True	AATAAA	-22	NA	200411829	200415550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200415364
transcript_91120.known	chr8	-	2184	8	FSM	ENSG00000104231.11	ENST00000220669.10	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	40.5814876865935	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATAATATCTGAGCCT	-2	True	NA	NA	False	AGTAAA	-23	NA	81721300	81701336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_91121.nic	chr8	-	1784	8	NIC	ENSG00000104231.11	novel	2184	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	107.500735640577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	-9	True	NA	-18	True	AATAAA	-14	NA	81721307	81701721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721248
transcript_91122.nic	chr8	-	1955	8	NIC	ENSG00000104231.11	novel	2184	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	106.529290788583	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	8	True	NA	-18	True	AATAAA	-14	NA	81732428	81701721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81732198
transcript_9113.known	chr1	+	1391	3	FSM	ENSG00000230623.7	ENST00000654000.1	1391	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATTTTCATGAGTCAC	48	False	NA	10	True	AGTAAA	-15	NA	200411720	200474725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200444613_200444946_200473908
transcript_91133.known	chr8	-	1705	7	FSM	ENSG00000104231.11	ENST00000522520.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	82.3724603385271	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTATAGGTTTACTTAA	9	True	NA	-61	True	NA	NA	NA	81721289	81701764	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_91134.known	chr8	-	772	7	FSM	ENSG00000104231.11	ENST00000521287.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	129.191610494731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAGAAATCACAGGGA	3	True	NA	NA	False	NA	NA	NA	81721295	81702681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_91135.nic	chr8	-	1915	7	NIC	ENSG00000104231.11	novel	1705	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	128.331168812915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	8	True	NA	-18	True	AATAAA	-14	NA	81732428	81701721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81732198
transcript_9114.known	chr1	-	4891	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	1	True	NA	-22	True	AATAAA	-29	NA	200410056	200404939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200409720_200409945
transcript_91147.known	chr8	-	698	7	FSM	ENSG00000104231.11	ENST00000519523.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	39.5196856712646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	10	True	NA	-3	True	AATAAA	-18	NA	81721288	81702913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_91149.known	chr8	-	882	6	FSM	ENSG00000104231.11	ENST00000520635.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	126.142776249772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATCATACTTTGGAAA	448	False	81732436	86	True	NA	NA	NA	81732407	81702824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81715115_81718181_81718225_81732198
transcript_9115.known	chr1	-	4864	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAAAGGAGATATT	-13	True	NA	-33	True	AATAAA	-18	NA	200410036	200404950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200409724_200409945
transcript_91155.known	chr8	-	633	6	FSM	ENSG00000104231.11	ENST00000517588.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	85.7517346763318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	35	False	NA	-3	True	AATAAA	-18	NA	81721263	81702913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_91157.known	chr8	+	1852	5	FSM	ENSG00000164695.5	ENST00000297265.5	1852	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.7169905660283	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCGTTATTATTTTT	-21	True	NA	NA	False	AATAAA	-2	NA	81732447	81759515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_81732817_81753063_81753242_81755369_81755485_81758141_81758296_81758479
transcript_91159.known	chr8	-	885	7	FSM	ENSG00000104231.11	ENST00000521895.5	885	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	150.290182277116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTAGAGTTTTTTGGTT	16	True	NA	-30	True	TTTAAA	-11	NA	81721282	81702547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81702858_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_9116.nnic	chr1	+	732	3	FSM	ENSG00000230623.7	ENST00000427825.2	725	3	-2	-5	-2	5	multi-exon	FALSE	canonical	3	50	junction_2	163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTATATTCTGCAGTGAC	3	True	NA	NA	False	TATAAA	-20	NA	200411809	200478354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200473908_200474101_200477967
transcript_91161.known	chr8	-	3109	8	FSM	ENSG00000104497.15	ENST00000345957.9	3109	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	9.70167248362837	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCTGTGTTGTTCATA	-13	True	NA	-4	True	AATAAA	-18	NA	81842185	81799582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81842121
transcript_91166.known	chr8	-	3032	7	FSM	ENSG00000104497.15	ENST00000353788.8	3032	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	27.7993804887007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGTGTTGTTCATATG	23	True	NA	-2	True	AATAAA	-20	NA	81842193	81799580	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81839611_81840083_81842121
transcript_91171.known	chr8	+	3726	19	FSM	ENSG00000133739.16	ENST00000360375.8	3726	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	19.737865470545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGTTCCTGAAGAG	18	True	NA	10	True	ATTAAA	-24	NA	85107237	85146080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85107400_85109594_85109801_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
transcript_91174.nic	chr8	+	3555	18	NIC	ENSG00000133739.16	novel	3726	19	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	16.7994480054315	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGTTCCTGAAGAG	-17	True	NA	10	True	ATTAAA	-24	NA	85107202	85146080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
transcript_91175.nic	chr8	+	2912	17	ISM	ENSG00000133739.16	ENST00000360375.8	3726	19	-88	7679	-65	227	5prime_fragment	FALSE	canonical	3	29	junction_1	19.4493532990174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTGAAAGAAAAATTTGA	NA	False	NA	NA	False	AGTAAA	-2	NA	85107149	85138401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_85107400_85109594_85109801_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337
transcript_91179.nic	chr8	+	2779	16	ISM	ENSG00000133739.16	ENST00000360375.8	3726	19	-88	7906	-65	0	5prime_fragment	TRUE	canonical	3	29	junction_1	18.2846626681733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAACTAAAACAAC	NA	False	NA	NA	False	AATGAA	-3	NA	85107149	85138174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_85107400_85109594_85109801_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
transcript_9118.nnic	chr1	+	1115	3	FSM	ENSG00000230623.7	ENST00000427825.2	725	3	-11	-379	-11	59	multi-exon	FALSE	canonical	3	50	junction_2	163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGCCTGGCGGGGTGGCT	-6	True	NA	NA	False	AAGAAA	-9	NA	200411800	200478728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_200411963_200473908_200474101_200477967
transcript_91183.known	chr8	+	2385	15	FSM	ENSG00000133739.16	ENST00000517875.5	2385	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	15.175167685588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATCACAGAAATAGAA	18	True	NA	18	True	AAAAAG	-25	NA	85107237	85138074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
transcript_91195.known	chr8	+	1890	8	FSM	ENSG00000133740.11	ENST00000418930.6	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	86.6927485610026	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	31	False	NA	12	True	AATAAA	-19	NA	85177224	85214518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212159_85212205_85213752
transcript_91198.known	chr8	-	483	5	FSM	ENSG00000176731.12	ENST00000615697.4	483	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	892.610077245378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATGCATCTAATTCT	15	True	NA	-69	True	AATATA	-1	NA	85220353	85214555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219361_85220305
transcript_91199.known	chr8	-	475	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_4	782.929235308019	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-7	True	NA	-15	True	AATAAA	-18	NA	85220375	85214501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
transcript_912.known	chr1	+	3039	2	FSM	ENSG00000183888.4	ENST00000329454.2	3039	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACCAAAAAAGTA	0	True	NA	NA	False	NA	NA	NA	16004235	16008807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16004386_16005918
transcript_9120.nnic	chr1	+	1327	3	NIC	ENSG00000230623.7	novel	725	3	NA	NA	4	59	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGCCTGGCGGGGTGGCT	-2	True	NA	NA	False	AAGAAA	-9	NA	200411670	200478728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_200411963_200473908_200474183_200477967
transcript_91201.known	chr8	-	887	4	FSM	ENSG00000176731.12	ENST00000619594.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	1674	junction_3	77.7231554228782	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCAGAGCCCTTTGTTT	-6	True	NA	NA	False	ATTAAA	-17	NA	85220374	85214047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85220305
transcript_91205.known	chr8	-	734	3	FSM	ENSG00000176731.12	ENST00000614462.4	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	721.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	1	True	NA	NA	False	AATATA	-25	NA	85220367	85214076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85214632_85217385_85217503_85220305
transcript_91207.known	chr8	+	1721	7	FSM	ENSG00000164879.7	ENST00000285381.3	1721	7	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	2.7938424357067	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGAGTGTTGTGTTTTTT	1	True	NA	6	True	AATAAA	-16	NA	85438858	85449040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85438944_85439711_85439910_85442072_85442192_85444033_85444127_85445155_85445219_85446141_85446298_85448033
transcript_91208.known	chr8	+	1562	7	FSM	ENSG00000104267.10	ENST00000285379.10	1562	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	17.7074999803912	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTTATTTATTTATT	1	True	NA	19	True	AATAAA	-44	NA	85464006	85481493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323_85474417_85475797_85475861_85477119_85477276_85480669
transcript_91210.known	chr8	+	684	4	FSM	ENSG00000104267.10	ENST00000520996.5	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	12.0277457017791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGATGGAGGGCAGAAA	-3	True	NA	NA	False	NA	NA	NA	85464002	85474577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323
transcript_91212.known	chr8	-	2042	3	FSM	ENSG00000253549.6	ENST00000521761.6	2042	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATACTGATTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	85464915	85440595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_85442238_85462735_85462802_85464581
transcript_91214.known	chr8	+	2370	8	FSM	ENSG00000147614.4	ENST00000285393.4	2370	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.38190457150472	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGGTTTCTTCCTT	-1	True	NA	1	True	AATAAA	-43	NA	86098909	86154225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_86099109_86113708_86113881_86139456_86139636_86141449_86141530_86142876_86142955_86150111_86150289_86151465_86151541_86152815
transcript_91216.nic	chr8	+	2365	17	ISM	ENSG00000123124.14	ENST00000265428.4	3362	23	37760	0	-5422	0	3prime_fragment	FALSE	canonical	3	90	junction_1	14.6893615841533	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTCTCTGTTACAT	NA	False	NA	9	True	AATAAA	-12	NA	86411800	86467476	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_86411875_86425222_86425319_86427642_86427818_86430696_86430752_86431405_86431491_86431614_86431744_86435451_86435528_86435632_86435705_86438584_86438674_86442618_86442779_86448147_86448282_86448372_86448514_86452558_86452680_86457920_86458026_86461223_86461321_86461773_86461847_86466793
transcript_91217.known	chr8	+	4877	25	FSM	ENSG00000123124.14	ENST00000517970.6	4877	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	20.1431939842938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCATAAAAGAGTTAAGT	-19	True	NA	NA	False	AAAAAG	-9	NA	86342546	86468503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_86342931_86368938_86369032_86374029_86374121_86380725_86380865_86381504_86381630_86398341_86398480_86398571_86398639_86402018_86402204_86411537_86411875_86425222_86425319_86427642_86427818_86430696_86430752_86431405_86431491_86431614_86431744_86435451_86435528_86435632_86435705_86438584_86438674_86442618_86442779_86448147_86448282_86448372_86448514_86452558_86452680_86457920_86458026_86461223_86461321_86461773_86461847_86466793
transcript_9122.known	chr1	-	7291	30	FSM	ENSG00000118193.12	ENST00000367350.5	7291	30	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	13.7248310343091	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTCGTGGTCTATGCTT	-6	True	NA	-4	True	AATAAA	-18	NA	200620751	200551499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200560721_200560881_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
transcript_91220.known	chr8	-	2970	10	FSM	ENSG00000176623.12	ENST00000406452.8	2970	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	22.2660678562196	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	5671	False	86508706	-11	True	AATAAA	-19	NA	86508686	86472348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_91223.nic	chr8	-	1045	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	73.4198143269409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTAATATATGAACTAT	5657	False	NA	-39	True	AATAAA	-23	NA	86508700	86474248	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_91228.known	chr8	-	1164	9	FSM	ENSG00000176623.12	ENST00000519966.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	96.5963735085329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGGAGATCAAGCAAAG	-23	True	NA	72	True	NA	NA	NA	86508681	86474020	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_91229.known	chr8	-	1106	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	71.1863751008576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCATGGCTCAGGCA	-17	True	NA	-19	True	AATAAA	-26	NA	86508675	86474111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_91239.known	chr8	+	4857	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_4	22.1295016606791	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	-15	True	NA	32	True	AATAAA	-20	NA	86514434	86561498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
transcript_91248.nic	chr8	+	1301	14	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-27	10265	-27	0	5prime_fragment	FALSE	canonical	3	213	junction_4	23.2925820530534	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAAGTTAAAAAATAAACA	NA	False	NA	NA	False	AATGAA	-29	NA	86514407	86551233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182
transcript_91253.nic	chr8	+	960	10	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-27	14858	-27	1307	5prime_fragment	FALSE	canonical	3	213	junction_4	23.8689839553704	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACAAGAATTCAGGTGTT	NA	False	NA	38	True	CATAAA	-27	NA	86514407	86546640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594
transcript_91258.nnic	chr8	-	1876	4	NNC	ENSG00000156103.16	novel	605	3	NA	NA	-120	2607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.624953392932	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGGACATTTTGTT	239	False	NA	NA	False	NA	NA	NA	88327603	88183717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_88183774_88185456_88186599_88197157_88197307_88327074
transcript_91262.known	chr8	-	1442	4	FSM	ENSG00000251136.10	ENST00000521996.2	1442	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCATAATAGACTATTAA	1800	False	NA	NA	False	NA	NA	NA	89757572	89720940	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_89721375_89722014_89722157_89724628_89724967_89757044
transcript_91265.known	chr8	-	1750	3	FSM	ENSG00000251136.10	ENST00000655144.2	1999	3	0	249	0	-56	multi-exon	FALSE	canonical	3	14	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATCCTCCAAAATTTT	3	True	NA	NA	False	NA	NA	NA	89757722	89724018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_89724967_89725517_89725642_89757044
transcript_91266.known	chr8	+	2516	11	FSM	ENSG00000104312.8	ENST00000220751.5	2516	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	76.6123358213284	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCCCTTTCTTCC	-7	True	NA	10	True	AATAAA	-20	NA	89757815	89791064	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_89758234_89762828_89762983_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_91271.known	chr8	+	1916	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	96.6825018958421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAATTTTTATGTCTCT	-17	True	NA	19	True	AGTAAA	-21	NA	89757805	89790608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_91275.known	chr8	+	4209	6	FSM	ENSG00000164823.11	ENST00000297438.6	4209	6	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_1	56.78520934187	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCAAGTTCCACTAAA	11	False	NA	NA	False	AATAAA	-14	NA	89901858	89927868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
transcript_91279.known	chr8	-	4907	19	FSM	ENSG00000104320.14	ENST00000396252.6	4907	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	71.9722168617863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATACTGTATTTAAGTC	NA	False	NA	-11	True	AATAAA	-14	NA	90003228	89933335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524_89984734_89984916_89984974_90003111
transcript_91283.known	chr8	-	4622	16	FSM	ENSG00000104320.14	ENST00000265433.8	4622	16	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_13	19.4520493064927	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTATTTAAGTCAAAAG	-24	True	NA	-6	True	AATAAA	-19	NA	89984667	89933330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_91286.known	chr8	+	1766	12	FSM	ENSG00000104325.7	ENST00000522161.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	171.437914936241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	8	True	NA	NA	False	AATAAA	-13	NA	90001476	90051999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_90001562_90005447_90005846_90006035_90006278_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_9129.nic	chr1	-	2138	8	NIC	ENSG00000118197.14	novel	945	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	26.7307054198893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACATCAGCTTTACTT	-17	True	NA	-10	True	AATAAA	-17	NA	200669922	200640810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_200641186_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_91292.nic	chr8	-	1813	11	ISM	ENSG00000104320.14	ENST00000265433.8	4622	16	-56	20107	-56	-10079	5prime_fragment	FALSE	canonical	3	147	junction_8	21.5118571955096	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAATGGATGATGTGGCC	NA	False	NA	NA	False	AATAAA	-5	NA	89984723	89953437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_91298.known	chr8	+	2760	10	FSM	ENSG00000104325.7	ENST00000220764.7	2760	10	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	38.5256047612782	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCAACCTTTTTT	8	True	NA	NA	False	AATAAA	-16	NA	90001476	90053633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_91299.nic	chr8	-	1558	10	ISM	ENSG00000104320.14	ENST00000265433.8	4622	16	-56	21953	-56	-11925	5prime_fragment	FALSE	canonical	3	147	junction_7	22.6274169979695	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTTTGATAACTTC	NA	False	NA	NA	False	NA	NA	NA	89984723	89955283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_9130.nic	chr1	-	2273	8	NIC	ENSG00000118197.14	novel	945	4	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	27.3779294397543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTGAAAAATTTGCACAT	NA	False	NA	-21	True	AATAAA	-6	NA	200669997	200640821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_200641257_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_91302.known	chr8	+	897	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.276908555049	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTCTAATAAATTCTT	7	True	NA	NA	False	AATAGA	-34	NA	90001475	90051972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_91305.known	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_10	27.3569004092203	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-1	True	NA	0	True	AATAAA	-22	NA	90082879	90058607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
transcript_91306.nnic	chr8	-	2344	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	84.1115925422887	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-2	True	NA	0	True	AATAAA	-22	NA	90082880	90058607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_91308.nnic	chr8	-	1533	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	84.1115925422887	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTCTGTGTAATCTCT	-2	True	NA	NA	False	NA	NA	NA	90082880	90059418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_91311.known	chr8	-	4992	3	FSM	ENSG00000180694.14	ENST00000458549.7	4992	3	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	33	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCGCTTTTCTTT	4	True	NA	-7	True	AATAAA	-14	NA	90646083	90621999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90625863_90631551_90631708_90645110
transcript_91312.known	chr8	-	1174	2	FSM	ENSG00000180694.14	ENST00000422900.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACACCTATTCACAA	613	False	NA	NA	False	NA	NA	NA	90645512	90625090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90625863_90645110
transcript_91314.nic	chr8	+	2726	6	ISM	ENSG00000123119.12	ENST00000417640.7	5049	13	136334	1709	-12083	-163	3prime_fragment	FALSE	canonical	3	33	junction_4	5.74108003776293	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAAAG	-13	True	NA	NA	False	NA	NA	NA	90928108	90957684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_91315.known	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	34.2660181520993	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-1	True	NA	-17	True	AATAAA	-20	NA	90985238	90958470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
transcript_91326.known	chr8	-	841	8	FSM	ENSG00000155099.8	ENST00000518869.1	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	162.938075128346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTGCAAGGCGATTT	-16	True	NA	NA	False	NA	NA	NA	91040872	90995810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91024288_91024367_91040643
transcript_91330.known	chr8	-	2759	7	FSM	ENSG00000155099.8	ENST00000285419.8	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	38.0336108666474	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTATATACACTTGAATA	-3	True	NA	-16	True	AATAAA	-26	NA	91040859	90993801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91040643
transcript_91332.known	chr8	+	1631	8	FSM	ENSG00000155100.11	ENST00000522894.5	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	96.2977949182766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTGCTTTAATAATT	-14	True	NA	NA	False	AATATA	-24	NA	91070324	91085417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91076591_91076732_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_91333.known	chr8	+	3148	7	FSM	ENSG00000155100.11	ENST00000404789.8	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	13.0596920161065	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTGCTTGAATTGT	5	True	NA	NA	False	AATAAA	-21	NA	91070343	91087093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_91335.known	chr8	-	4892	3	FSM	ENSG00000253738.3	ENST00000522817.3	4935	3	43	0	40	0	multi-exon	FALSE	canonical	3	65	junction_1	129.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTGACCACTGT	-1	True	NA	NA	False	AATAAA	-41	NA	91070149	91059317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91063747_91069578_91069823_91069930
transcript_91336.known	chr8	-	2171	2	FSM	ENSG00000253738.3	ENST00000524003.1	2171	2	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGGACTATGACTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	91070189	91067910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91069823_91069930
transcript_9134.known	chr1	-	2229	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	10.3292728471573	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-2	True	NA	80	True	AATAAA	-23	NA	200669907	200644036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_91342.known	chr8	-	7483	12	FSM	ENSG00000079102.16	ENST00000614812.4	7483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	7.85404038780188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-4	True	NA	1	True	AATAAA	-25	NA	92095654	91954966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095346
transcript_91343.known	chr8	-	2370	11	FSM	ENSG00000079102.16	ENST00000360348.6	2370	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	8.10925397308532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAAGGGCATGAGCATT	8170	False	NA	NA	False	AAAAAG	-8	NA	92095215	91959786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095027
transcript_91344.known	chr8	-	1882	6	FSM	ENSG00000205133.12	ENST00000517858.5	1882	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.8453608673866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTCCTGCTAGCCAA	5	True	NA	-16	True	AATAAA	-13	NA	92966087	92885348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92921502_92921661_92954405_92954565_92966006
transcript_91347.known	chr8	-	3563	5	FSM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	27.8433115846517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGCCTTTTAGTCCTC	-4	True	NA	-13	True	AATAAA	-18	NA	92966144	92883634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_91348.known	chr8	-	3667	5	FSM	ENSG00000205133.12	ENST00000521988.6	3667	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	23.7526314331697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCGGCATTTACCATT	-4	True	NA	-5	True	AATAAA	-22	NA	92966144	92883533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_91351.known	chr8	-	865	5	FSM	ENSG00000205133.12	ENST00000524037.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.9483405576306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTCAAATCACATTCAG	2	True	NA	NA	False	NA	NA	NA	92966109	92886232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886668_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_91358.known	chr8	-	774	4	FSM	ENSG00000205133.12	ENST00000521617.5	774	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	45.675181687895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCTCAAATCACATTC	-3	True	NA	NA	False	NA	NA	NA	92966114	92886234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92966006
transcript_91359.known	chr8	-	3510	4	FSM	ENSG00000205133.12	ENST00000537541.1	3510	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	45.675181687895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGGCATTTACCATTTA	-4	True	NA	-3	True	AATAAA	-24	NA	92966144	92883531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92966006
transcript_91360.known	chr8	-	1753	4	FSM	ENSG00000205133.12	ENST00000517540.5	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.6647058484282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTTCCTGCTAGCC	11	True	NA	-18	True	AATAAA	-11	NA	92966129	92885350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886736_92891988_92892075_92954405_92954565_92966006
transcript_91365.nic	chr8	-	1646	3	ISM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	32024	0	1308	5prime_fragment	FALSE	canonical	3	53	junction_1	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGTCGTGATGG	-4	True	NA	NA	False	AATACA	-14	NA	92966144	92915658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_92917008_92954405_92954565_92966006
transcript_91367.known	chr8	-	1630	4	FSM	ENSG00000205133.12	ENST00000523580.5	1630	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.8275506109403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGAAATATCTAAGG	-1	True	NA	13	True	AATAAA	-42	NA	92966123	92885319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92966006
transcript_91368.known	chr8	+	1943	10	FSM	ENSG00000188343.14	ENST00000518116.5	1943	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	171.792366780223	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGTCAATCATGGCT	37	True	NA	14	True	AATAAA	-19	NA	93700613	93729250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93724509_93724596_93726393_93726514_93728204
transcript_91369.known	chr8	+	4198	9	FSM	ENSG00000188343.14	ENST00000518322.6	4198	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	143.352493874366	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCATAGCAAGCAGGAT	-27	True	NA	NA	False	NA	NA	NA	93700549	93731527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_91372.known	chr8	+	914	8	FSM	ENSG00000188343.14	ENST00000423990.6	914	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	170.813898015068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	5	True	NA	NA	False	ACTAAA	-41	NA	93700581	93728389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93726393_93726514_93728204
transcript_91379.known	chr8	-	8530	4	FSM	ENSG00000183808.12	ENST00000520560.6	8530	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	39.1946708395698	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	9	True	NA	-4	True	AATAAA	-19	NA	93741009	93728154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_93736439_93737306_93737356_93740628_93740697_93740880
transcript_91380.known	chr8	-	8470	3	FSM	ENSG00000183808.12	ENST00000399300.7	8470	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	29.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	1	True	NA	-4	True	AATAAA	-19	NA	93741017	93728154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_93736439_93737306_93737356_93740880
transcript_91385.known	chr8	+	4678	28	FSM	ENSG00000164953.17	ENST00000453321.8	4678	28	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_18	11.8269414139868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCGACTCCTTTGTTC	-14	True	NA	72	True	CATAAA	-21	NA	93754893	93818121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_9139.nnic	chr1	-	1992	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	27.5645706579217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-17	True	NA	80	True	AATAAA	-23	NA	200669922	200644036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_91390.known	chr8	+	2535	19	FSM	ENSG00000164953.17	ENST00000453906.6	2535	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.2344465432865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCATGTTTTGTGTGC	-14	True	NA	-43	True	NA	NA	NA	93754893	93816860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_91392.known	chr8	+	1319	3	FSM	ENSG00000164953.17	ENST00000475305.1	1319	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAATATCATTGTT	-2	True	NA	NA	False	NA	NA	NA	93754905	93759480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93755138_93755777_93755867_93758482
transcript_91394.known	chr8	+	4210	2	FSM	ENSG00000164951.16	ENST00000297598.5	4210	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	12	True	NA	23	True	ATTAAA	-22	NA	93916922	93926068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93917080_93922015
transcript_91396.known	chr8	+	2554	3	FSM	ENSG00000164951.16	ENST00000520728.5	2554	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTATTTGTATTAA	23	True	NA	NA	False	AAGAAA	-9	NA	93916933	93924388	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_93917080_93917910_93917946_93922015
transcript_91397.known	chr8	-	2187	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	9.90896059130321	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-2	True	NA	NA	False	AATAAA	-23	NA	94262319	94249252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
transcript_91398.known	chr8	-	2103	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	8.86002257333467	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	94262350	94249252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
transcript_9140.nnic	chr1	-	1983	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	-90	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	27.5645706579217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTATTTCCCTTAAT	NA	False	NA	-4	True	AATAAA	-16	NA	200669997	200644120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_91402.known	chr8	-	3074	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_12	20.6526175640014	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	2	True	NA	-1	True	AATAAA	-21	NA	94475115	94371959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_91407.nic	chr8	-	1775	10	ISM	ENSG00000197275.14	ENST00000336148.10	3074	15	-33	19847	-33	0	5prime_fragment	FALSE	canonical	3	129	junction_7	23.0801074092971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCCCACCTAAAATAGA	NA	False	NA	NA	False	AATAAA	-1	NA	94475148	94391806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_91409.known	chr8	-	1879	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	54.1623075169029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATTCTTAAAGCATA	11	True	NA	NA	False	AATAAA	-1	NA	94475062	94431159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
transcript_9141.nic	chr1	-	1600	6	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-4	5060	-4	1346	5prime_fragment	FALSE	canonical	3	54	junction_2	11.9766439372639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAGGAAAAACATATTG	-6	True	NA	NA	False	NA	NA	NA	200669911	200649096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_91413.known	chr8	-	5391	2	FSM	ENSG00000265817.4	ENST00000481490.3	5391	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTGTACTTTTTTT	-1	True	NA	-3	True	AATACA	-16	NA	94436944	94427715	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94432657_94436494
transcript_91414.known	chr8	-	2183	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACATTTTGCTGCCAC	-5	True	NA	-7	True	ATTAAA	-20	NA	94639467	94637284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94637300_94639500
transcript_91415.known	chr8	+	3756	16	FSM	ENSG00000104413.18	ENST00000358397.9	3756	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	169.183082947308	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	7	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_91418.known	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_14	116.081503933898	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	7	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_9142.nic	chr1	-	1463	5	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-15	6406	-15	0	5prime_fragment	FALSE	canonical	3	54	junction_1	13.0192165662915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTGAAATTTTAAATGT	-17	True	NA	NA	False	AAAAAG	-7	NA	200669922	200650442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_91422.known	chr8	+	3746	15	FSM	ENSG00000104413.18	ENST00000423620.6	3746	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	193.637903714903	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	69	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94705924
transcript_91424.nic	chr8	+	2694	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	41	-72	combination_of_known_junctions	FALSE	canonical	3	92	junction_14	146.118923469612	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCCATGATGATATCT	-3	True	NA	35	True	AATAAA	-45	NA	94641114	94706443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94705924
transcript_91425.nic	chr8	+	3667	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_14	146.118923469612	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	-2	True	NA	20	True	AATAAA	-21	NA	94641164	94707466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94705924
transcript_91426.nic	chr8	+	2707	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-16	-75	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	136.522723682296	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTTGGCCATGATGATA	53	False	NA	32	True	AATAAA	-42	NA	94641057	94706440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_91427.nic	chr8	+	3805	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	136.522723682296	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	395	False	NA	20	True	AATAAA	-21	NA	94640985	94707466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_91430.known	chr8	+	3274	14	FSM	ENSG00000104413.18	ENST00000646773.1	3274	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_13	120.910891928652	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAGAAAAAAAAAAAGGT	32	False	NA	13	True	NA	NA	NA	94641198	94707258	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94705924
transcript_91432.nic	chr8	+	2327	12	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-34	32230	-9	6663	5prime_fragment	FALSE	canonical	3	524	junction_4	50.9267826402046	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAACCACATAGATT	-2	True	NA	NA	False	AAAACA	-12	NA	94641164	94675028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307
transcript_91437.nic	chr8	+	1506	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-38	38893	-13	0	5prime_fragment	FALSE	canonical	3	524	junction_4	45.7005821612432	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGCATGAAAATAGTCT	-6	True	NA	12	True	AATAAA	-22	NA	94641160	94668365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_91439.known	chr8	+	1813	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	893	False	NA	20	True	AATAAA	-21	NA	94705653	94707466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94705700_94707500
transcript_91440.known	chr8	+	3465	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	182.704631163309	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	37	False	NA	20	True	AATAAA	-21	NA	94641203	94707466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
transcript_91441.known	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	17.4540843852777	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	0	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
transcript_91444.nic	chr8	+	4082	18	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	0	-1990	combination_of_known_junctions	TRUE	canonical	3	42	junction_2	20.8946939507167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGATGTTTTAAATAATGA	0	True	NA	22	True	AATAAA	-23	NA	94719899	94791846	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94720015_94726330_94726442_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
transcript_91459.known	chr8	+	1795	9	FSM	ENSG00000156170.13	ENST00000396124.9	1795	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	73.7596392005818	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTACATTCTGCGCTAT	-13	True	NA	4	True	ATTAAA	-17	NA	95024988	95058710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_95025206_95031994_95032095_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_91460.nic	chr8	+	2987	27	NIC	ENSG00000164941.14	novel	4645	27	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	68.4928731229684	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTACACAATTAGTGG	149	False	NA	13	True	AATAAA	-30	NA	94823252	94880314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_94823302_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
transcript_91462.known	chr8	-	2674	12	FSM	ENSG00000175305.18	ENST00000308108.9	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	15.9103895573857	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGGAGA	0	True	NA	11	True	AATAAA	-32	NA	94895201	94880223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_91463.nic	chr8	-	1320	11	ISM	ENSG00000175305.18	ENST00000396133.7	1361	12	53	350	0	-350	5prime_fragment	FALSE	canonical	3	53	junction_10	16.5918654767931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGATTTGTGAAGTGTCT	0	True	NA	3	True	AATAAA	-18	NA	94895201	94881963	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_91464.known	chr8	+	2901	2	FSM	ENSG00000175895.4	ENST00000315367.4	2901	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTCTGTATATT	5	True	NA	7	True	AATAAA	-18	NA	95133784	95156685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_95134031_95154030
transcript_91468.nnic	chr8	-	2598	7	NNC	ENSG00000156172.6	novel	3340	6	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1063786238637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGAAATCATTTTGA	-10	True	NA	-8	True	AGTAAA	-20	NA	95269213	95244916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_95245505_95246254_95247771_95252187_95252284_95259839_95259906_95260467_95260533_95263686_95263775_95269034
transcript_91470.known	chr8	-	3340	6	FSM	ENSG00000156172.6	ENST00000286688.6	3340	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.87814388593306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATTTTGATGTT	2	True	NA	-4	True	AGTAAA	-24	NA	95269201	95244912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_95247771_95252187_95252284_95259839_95259906_95260467_95260533_95263686_95263775_95269034
transcript_91473.known	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2664.83361347383	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	2	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
transcript_91474.known	chr8	-	695	4	FSM	ENSG00000156467.10	ENST00000523920.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	2526.0277556318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGGGAAAGAAAAGAAAGAG	-5	True	NA	NA	False	NA	NA	NA	96235546	96231094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96231516_96231773_96231941_96233155_96233228_96235511
transcript_91477.known	chr8	-	8459	4	FSM	ENSG00000156467.10	ENST00000287022.10	8459	4	0	0	0	0	multi-exon	FALSE	canonical	3	4472	junction_3	633.635191222485	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTCTGTGTCTGGC	-4	True	NA	NA	False	AATAAA	-16	NA	96235545	96222946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96231133_96231773_96231941_96233155_96233228_96235511
transcript_91479.known	chr8	-	750	3	FSM	ENSG00000156467.10	ENST00000519322.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	4472	junction_2	772	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATTTGACATTTTAAAAA	-4	True	NA	NA	False	NA	NA	NA	96235545	96231296	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96231941_96233155_96233228_96235511
transcript_9148.known	chr1	+	3496	2	FSM	ENSG00000229191.1	ENST00000458003.1	3496	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTACAAGTTGTGTG	6	True	NA	8	True	AATAAA	-18	NA	201023960	201028792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201024086_201025421
transcript_91484.known	chr8	-	1463	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_7	40.0015305829613	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGAAACCATTTGATAC	-8	True	NA	14	True	AATAAA	-36	NA	96261610	96239401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_91485.nnic	chr8	-	1097	7	NIC	ENSG00000156469.9	novel	1463	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_6	156.781961122233	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTCGGGTCTCAACT	-8	True	NA	-8	True	AATAAA	-14	NA	96261610	96239423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96261500
transcript_91488.nic	chr8	-	1127	7	ISM	ENSG00000156469.9	ENST00000287025.4	1463	8	-10	4579	-10	-4552	5prime_fragment	FALSE	canonical	3	394	junction_6	38.4129607757012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGATTTTGTGCACAAT	-18	True	NA	NA	False	AATAAA	-17	NA	96261620	96243980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_9149.known	chr1	+	2497	2	FSM	ENSG00000229191.1	ENST00000446333.1	2497	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	201023948	201027790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201024077_201025421
transcript_91491.known	chr8	+	4990	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	30.6113631770223	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	96261901	96336995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_91493.known	chr8	+	2366	11	FSM	ENSG00000156471.13	ENST00000337004.8	2366	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.0311118726137	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTGTAAAATGCTC	-2	True	NA	30	True	AATAAA	-27	NA	96261912	96334552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96262220_96273298_96273391_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_91495.known	chr8	+	677	5	FSM	ENSG00000169439.12	ENST00000522911.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	342.359734051772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGCCATTCTGGCACT	195	False	NA	NA	False	AATAAA	-44	NA	96494007	96609643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96494044_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_91497.nnic	chr8	+	1990	5	NNC	ENSG00000169439.12	novel	677	5	NA	NA	-162	469	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	368.330948333153	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTTATAAATTTTG	0	True	NA	-11	True	AATAAA	-23	NA	96493650	96610643	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_96494044_96593523_96593592_96602394_96602529_96608334_96608471_96609384
transcript_91498.known	chr8	+	3307	5	FSM	ENSG00000169439.12	ENST00000302190.9	3307	5	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	45.7684389071771	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTCTTCAACTGTA	0	True	NA	27	True	AATAAA	-40	NA	96493812	96611790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96494332_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_91504.known	chr8	+	1932	8	FSM	ENSG00000104324.16	ENST00000220763.10	1932	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	2.39045721866879	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTTCATTTATG	-5	True	NA	14	True	AATAAA	-19	NA	96645241	97143501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_96645403_96784863_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
transcript_91505.known	chr8	+	7662	12	FSM	ENSG00000147649.10	ENST00000336273.8	7662	12	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_6	27.6940188070628	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCTCAAGAAATATAAC	-24	True	NA	20	True	AATAAA	-23	NA	97644183	97730260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
transcript_9151.known	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	535.26643832768	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	50	False	NA	-81	True	NA	NA	NA	201154433	201135598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
transcript_91511.known	chr8	+	4133	19	FSM	ENSG00000132561.14	ENST00000254898.7	4133	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	13.3425893798027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACTTTAAAAAGAATGA	-19	True	NA	NA	False	AATAAA	-20	NA	97869063	98036724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
transcript_91512.known	chr8	+	3554	19	FSM	ENSG00000132561.14	ENST00000521689.5	3554	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	10.8063767182982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACACAACTTGCTTCTG	3812	False	NA	NA	False	AATATA	-3	NA	97868839	98035978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033098_98033177_98033560_98033660_98035656
transcript_91514.known	chr8	-	1129	5	FSM	ENSG00000156482.11	ENST00000521726.1	1129	5	0	0	0	0	multi-exon	FALSE	canonical	2	141	junction_4	2736.49323953121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACCTTTTCACCTAC	NA	False	NA	-104	True	NA	NA	NA	98046469	98041806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045714
transcript_91516.known	chr8	-	498	5	FSM	ENSG00000156482.11	ENST00000287038.8	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	3950	junction_4	1118.44520987843	5685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-1	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045507
transcript_91517.known	chr8	-	575	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	5892	junction_1	390.027634348588	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	588	False	NA	-18	True	AATAAA	-19	NA	98045514	98041720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
transcript_91518.known	chr8	-	440	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	2433.02511033076	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	0	True	NA	-18	True	AATAAA	-19	NA	98045544	98041720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
transcript_91519.known	chr8	-	614	5	FSM	ENSG00000156482.11	ENST00000518850.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2538.33843291236	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-1	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98041851_98042644_98042776_98044826_98045089_98045346_98045400_98045507
transcript_91520.known	chr8	+	1503	3	FSM	ENSG00000177459.11	ENST00000318528.8	1503	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGGGTGACTTTCT	-3	True	NA	7	True	AATAAA	-19	NA	98064567	98093609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98064728_98089075_98090030_98093220
transcript_91521.known	chr8	+	596	2	FSM	ENSG00000177459.11	ENST00000545282.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGGTGACTTTCTT	32	False	NA	8	True	AATAAA	-20	NA	98064521	98093610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98064728_98093220
transcript_91524.known	chr8	-	884	6	FSM	ENSG00000132541.11	ENST00000522791.5	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	216.806272971978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGTTATATAGATAATA	8	True	NA	15	True	ATTAAA	-38	NA	98117159	98102396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108714_98117031
transcript_91525.known	chr8	-	987	6	FSM	ENSG00000132541.11	ENST00000254878.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	53.2616184508132	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGATTTTGTTCAC	-4	True	NA	-11	True	AATAAA	-15	NA	98117171	98102343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108752_98117031
transcript_91526.known	chr8	-	848	6	FSM	ENSG00000132541.11	ENST00000520507.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	223.022510074656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTAAATTTGAG	57	False	NA	-27	True	AGTAAA	-2	NA	98117110	98102438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108769_98117031
transcript_91527.known	chr8	-	761	5	FSM	ENSG00000132541.11	ENST00000521560.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	233.73917087215	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGCTTTTACTTGAG	-4	True	NA	-52	True	TTTAAA	-39	NA	98117171	98102463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98117031
transcript_91529.known	chr8	+	4739	16	FSM	ENSG00000104356.11	ENST00000401707.7	4739	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	8.67845352326989	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGTTGTGAATATTTA	-21	True	NA	12	True	AATAAA	-17	NA	98117292	98159835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481_98136739_98136860_98136955_98140077_98140190_98140768_98140889_98146567_98146684_98148814_98149007_98150484_98150640_98156049_98156413_98157616
transcript_91532.known	chr8	-	2833	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	22.7861800221099	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCGTTTCTGTATCTTT	-11	True	NA	-2	True	AATAAA	-21	NA	98825688	98454632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_91536.known	chr8	-	2485	9	FSM	ENSG00000104375.17	ENST00000617590.1	2485	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	53.9252955485642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTTCTGTATCTTTGT	6	True	NA	0	True	AATAAA	-23	NA	98825671	98454630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_91537.nic	chr8	-	1416	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-34	124745	-34	292	5prime_fragment	FALSE	canonical	3	129	junction_4	14.6663574488121	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGTGTCATATCT	-45	True	NA	-3	True	AATAAA	-17	NA	98825722	98579377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_91538.nic	chr8	-	1224	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-34	124937	-34	100	5prime_fragment	FALSE	canonical	3	129	junction_4	14.6663574488121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTAAGATATGTTTTT	-45	True	NA	68	True	ATTAAA	-20	NA	98825722	98579569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_91541.known	chr8	+	1838	4	FSM	ENSG00000164920.10	ENST00000297565.9	1834	4	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGTGTCTTGCTATT	-4	True	NA	11	True	AATAAA	-28	NA	98944441	98952104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_98944824_98948838_98949609_98950655_98950756_98951518
transcript_91543.nic	chr8	+	4611	29	ISM	ENSG00000132549.20	ENST00000357162.7	14011	62	-11	366204	-3	36	5prime_fragment	FALSE	canonical	2	8	junction_19	5.54423307664489	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAAGAAAATCTCCTGG	-22	True	NA	NA	False	NA	NA	NA	99013262	99511376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400_99442636_99467413_99467635_99481598_99481803_99501686_99501859_99502835_99502951_99507136_99507204_99511103
transcript_91545.known	chr8	-	380	2	FSM	ENSG00000253948.3	ENST00000521696.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTTTTAATTTCTAA	282	False	NA	-11	True	AATAAA	-19	NA	99013044	98996762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_98996967_99012868
transcript_91546.known	chr8	-	694	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	1861.92469116115	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGACAGTAAGTCTT	1	True	NA	-16	True	AATAAA	-12	NA	99893623	99878150	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
transcript_91547.known	chr8	-	571	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	1824.80629108955	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	88	False	NA	-14	True	AATAAA	-14	NA	99893622	99878148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
transcript_91548.known	chr8	-	429	4	FSM	ENSG00000164919.11	ENST00000517682.6	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	1835.14256182516	2315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-1	True	NA	-14	True	AATAAA	-14	NA	99893681	99878148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
transcript_91549.known	chr8	-	724	4	FSM	ENSG00000164919.11	ENST00000518171.5	724	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1782.25157221607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATTTGTATGTTATCT	13	False	NA	NA	False	NA	NA	NA	99893697	99885991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_99886383_99887489_99887619_99891907_99892053_99893638
transcript_9155.known	chr1	-	507	6	FSM	ENSG00000116857.17	ENST00000435310.5	507	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	552.361620679786	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	65	False	NA	NA	False	NA	NA	NA	201154418	201135800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154361
transcript_91551.known	chr8	+	947	4	FSM	ENSG00000147669.11	ENST00000353107.8	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_3	202.374789822141	738	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	-13	True	NA	30	True	AATAAA	-16	NA	100150635	100154003	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_100150710_100151346_100151417_100151823_100151917_100153293
transcript_91553.known	chr8	-	4186	10	FSM	ENSG00000034677.13	ENST00000341084.7	4186	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	9.01165226488516	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTTCTGGTGTGTA	-1	True	NA	-10	True	AATAAA	-17	NA	100309953	100257066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100309866
transcript_91559.known	chr8	-	1686	6	FSM	ENSG00000186106.11	ENST00000520552.5	1686	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.4005649672431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTTTTCATTTC	20	True	NA	NA	False	TTTAAA	-5	NA	100559742	100509751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100510640_100522605_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559710
transcript_9156.known	chr1	-	1544	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	547.477341996909	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-18	True	NA	-4	True	ATTAAA	-17	NA	201154501	201134772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
transcript_91561.known	chr8	-	2779	6	FSM	ENSG00000186106.11	ENST00000519597.5	2779	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	35.6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-22	True	NA	-2	True	AATAAA	-21	NA	100559784	100520771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100532355_100532461_100533208_100533312_100559710
transcript_91565.known	chr8	-	2649	5	FSM	ENSG00000186106.11	ENST00000335659.7	2649	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	8.87059749960509	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	3	True	NA	-2	True	AATAAA	-21	NA	100559759	100520771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559710
transcript_9157.known	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	566.280990321943	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	35	False	NA	-3	True	ATTAAA	-18	NA	201171574	201134771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
transcript_91573.known	chr8	-	2861	15	FSM	ENSG00000070756.17	ENST00000318607.10	2861	15	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	768.935949802036	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATTTGCTTTTTTTCA	-2	True	NA	-16	True	AATAAA	-17	NA	100722088	100702915	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_91587.known	chr8	-	3395	14	FSM	ENSG00000070756.17	ENST00000678709.1	3395	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	754.839071371269	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1169	False	NA	NA	False	NA	NA	NA	100721559	100702050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100718281_100721390
transcript_91589.known	chr8	-	2207	14	FSM	ENSG00000070756.17	ENST00000519100.6	2207	14	0	0	0	0	multi-exon	FALSE	canonical	1	101	junction_5	2110.29744391049	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCAGTTCTGTTTTAA	1083	False	NA	25	True	NA	NA	NA	100721645	100703015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_91595.known	chr8	-	3145	14	FSM	ENSG00000070756.17	ENST00000677787.1	3145	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_9	2168.19103833085	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1083	False	NA	NA	False	NA	NA	NA	100721645	100702050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_91597.known	chr8	-	3116	14	FSM	ENSG00000070756.17	ENST00000523555.6	3116	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_9	797.822561874936	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGACTTTCAGGTGGT	141	False	NA	4	True	ATTAAA	-35	NA	100722587	100704096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_9160.known	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_4	67.0125921002911	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	9	True	NA	-3	True	ATTAAA	-18	NA	201154474	201134771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
transcript_91605.known	chr8	-	487	5	FSM	ENSG00000070756.17	ENST00000517990.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_3	3541.0152057708	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAAAAAAACATTGCAA	0	True	NA	2	True	AAGAAA	-31	NA	100706779	100703284	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100703360_100704296_100704391_100704925_100705030_100705588_100705674_100706650
transcript_91609.known	chr8	-	812	6	FSM	ENSG00000164924.18	ENST00000395948.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	1805.53511181588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTTATGACAGGTTTATG	-27	True	NA	NA	False	NA	NA	NA	100952990	100920602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948733_100952849
transcript_91610.known	chr8	-	964	6	FSM	ENSG00000164924.18	ENST00000395951.7	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_5	1715.17112848835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCCACAAATAGTTTT	6	True	NA	NA	False	NA	NA	NA	100950557	100920629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100950405
transcript_91611.known	chr8	-	2974	6	FSM	ENSG00000164924.18	ENST00000395956.7	2974	6	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_5	1656.67891880111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	5333	False	NA	-14	True	NA	NA	NA	100951449	100918682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951234
transcript_91612.known	chr8	-	994	6	FSM	ENSG00000164924.18	ENST00000395953.6	994	6	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	1683.73387445879	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTACTTCTATTTGAAT	5188	False	NA	NA	False	NA	NA	NA	100951594	100920586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951455
transcript_91613.known	chr8	-	3007	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_5	1513.1360282539	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-30	True	NA	-37	True	AATAAA	-11	NA	100952993	100918578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
transcript_91614.known	chr8	-	2829	6	FSM	ENSG00000164924.18	ENST00000353245.7	2829	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_5	1723.52886833961	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTTTTGTTGCTTG	-5	True	NA	13	True	NA	NA	NA	100953341	100918685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100953268
transcript_9162.known	chr1	-	1330	16	FSM	ENSG00000118194.21	ENST00000509001.5	1330	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	33.3843609427462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCACCACACACTGA	8611	False	NA	-34	True	NA	NA	NA	201377762	201359033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373402_201377622
transcript_91629.known	chr8	-	1399	5	FSM	ENSG00000164924.18	ENST00000521309.5	1399	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	1945.47751207769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAATAACTTGAGATGAT	-4	True	NA	54	True	NA	NA	NA	100952019	100919828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100951928
transcript_9163.known	chr1	-	1156	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	28.9654199961878	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	0	True	NA	-14	True	AATAAA	-18	NA	201377680	201359013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_91633.known	chr8	-	883	4	FSM	ENSG00000164924.18	ENST00000518736.5	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	2001.8313282259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGCAATTACTGAGAGA	5187	False	NA	NA	False	NA	NA	NA	100951595	100923984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_100924299_100924915_100925040_100948595_100948901_100951455
transcript_91637.known	chr8	-	2672	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1474	junction_2	42.7733042393916	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTAGTCTAATTTCTT	-25	True	NA	NA	False	ATTAAA	-18	NA	101205673	101197051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
transcript_91642.nnic	chr8	-	2635	10	NNC	ENSG00000048392.13	novel	4774	9	NA	NA	-118	-122	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_1	130.833038452133	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGGCTTAGTATGTT	709	False	NA	-12	True	AATAAA	-16	NA	102239079	102204623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_102205960_102208094_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_91644.known	chr8	-	4774	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	40.7001228499374	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGTCTGCAGATAAA	-20	True	NA	-2	True	AATAAA	-18	NA	102238961	102204501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_91646.known	chr8	-	1613	9	FSM	ENSG00000048392.13	ENST00000522368.5	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	147.874735840846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	-1	True	NA	NA	False	TTTAAA	-44	NA	102238775	102207744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238558
transcript_91654.known	chr8	-	900	8	FSM	ENSG00000048392.13	ENST00000395912.6	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	159.675947353586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTCGTTTTAAAAC	914	False	NA	NA	False	NA	NA	NA	102238874	102208132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102238826
transcript_91656.known	chr8	-	10895	59	FSM	ENSG00000104517.13	ENST00000520539.6	10895	59	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	94.3708829845908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTTTGGTCTTGTTT	13	True	NA	-19	True	AATAAA	-16	NA	102412700	102252272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265279_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_91659.known	chr8	-	9008	59	FSM	ENSG00000104517.13	ENST00000521922.5	9008	59	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	99.867712738214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGTACCTTAAAGAGAT	2	True	NA	NA	False	TATAAA	-33	NA	102412759	102254197	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265276_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_91662.known	chr8	+	2376	3	FSM	ENSG00000246263.4	ENST00000520820.3	2384	3	8	0	8	0	multi-exon	FALSE	canonical	2	8	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCAATAAAAGTGGTTTT	-18	True	NA	NA	False	NA	NA	NA	102239393	102253750	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_102239701_102244004_102244122_102251798
transcript_91664.known	chr8	-	3659	4	FSM	ENSG00000155090.15	ENST00000395884.3	3659	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	48.1456124688429	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGAATGGTCATTGCA	1554	False	NA	-7	True	AATAAA	-14	NA	102654375	102648785	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102653469
transcript_91665.known	chr8	-	2915	4	FSM	ENSG00000155090.15	ENST00000285407.11	2915	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	4.49691252107735	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATGGTCATTGCATT	-6	True	NA	-5	True	AATAAA	-16	NA	102655725	102648783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102655565
transcript_9167.nnic	chr1	-	1212	15	NNC	ENSG00000118194.21	novel	1108	15	NA	NA	-1038	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.4822631598597	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGCATTTCTGTCAC	9967	False	NA	-18	True	AATAAA	-14	NA	201376406	201359017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201376258
transcript_91671.nnic	chr8	+	904	5	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-209	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	14.9059551857638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102929972	102977876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_102930115_102930313_102930519_102937623_102937758_102941920_102942054_102977586
transcript_91672.nnic	chr8	+	1065	5	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.2805141726785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930170	102977876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_102930519_102937623_102937758_102941538_102941699_102941920_102942054_102977586
transcript_91674.known	chr8	+	756	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.3527000944073	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAAAGTATATGAAATC	NA	False	NA	NA	False	NA	NA	NA	102930181	102977738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
transcript_91677.nnic	chr8	+	776	3	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930165	102977876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_102930519_102941920_102942054_102977586
transcript_91678.known	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	-4	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_102864624_102865102
transcript_91679.known	chr8	+	499	3	FSM	ENSG00000253320.7	ENST00000519648.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102941622	102977876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_102941699_102941920_102942054_102977586
transcript_9168.known	chr1	-	1108	15	FSM	ENSG00000118194.21	ENST00000412633.3	1108	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	27.2205654546975	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGCATTTCTGTCAC	8707	False	NA	-18	True	AATAAA	-14	NA	201377666	201359017	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_91682.known	chr8	-	4316	13	FSM	ENSG00000155096.15	ENST00000683787.1	4316	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	682.01313016849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTATTCCTCATGTTT	8237	False	NA	29	True	GATAAA	-1	NA	102864192	102826371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102828679_102829271_102829487_102829820_102829934_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849986_102850145_102858012_102858151_102863806
transcript_91683.known	chr8	-	2857	13	FSM	ENSG00000155096.15	ENST00000347770.8	2857	13	0	0	0	0	multi-exon	FALSE	canonical	2	587	junction_10	453.562258374991	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTCATTA	8236	False	NA	-4	True	AGTAAA	-17	NA	102864193	102827822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849998_102850145_102858012_102858151_102863806
transcript_91693.known	chr8	-	4404	12	FSM	ENSG00000155096.15	ENST00000681985.1	4404	12	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_10	520.118247839409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAATTAAGCTAGATTT	8237	False	NA	-80	True	AATAGA	-2	NA	102864192	102826110	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
transcript_91694.known	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	2	1104	junction_10	252.398347102026	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	0	True	NA	-5	True	AATAGA	-20	NA	102864163	102826307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
transcript_91705.known	chr8	+	5635	13	FSM	ENSG00000155097.12	ENST00000518738.2	5635	13	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_10	28.0449787543748	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	-18	True	NA	14	True	AATAAA	-16	NA	103021082	103073051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103021226_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_91708.known	chr8	+	5612	13	FSM	ENSG00000155097.12	ENST00000395862.7	5612	13	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	126.067524895721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	6	True	NA	14	True	AATAAA	-16	NA	103021062	103073051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103021183_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_9171.known	chr1	-	2627	10	FSM	ENSG00000159166.15	ENST00000391967.7	2627	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_6	23.5613200493762	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGATTGACTGCCCTA	-7	True	NA	-7	True	TTTAAA	-15	NA	201399324	201380832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399268
transcript_91716.known	chr8	+	2774	8	FSM	ENSG00000164930.12	ENST00000523739.5	2774	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	23.6763896861711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCTTTTACACTGAATT	-6	True	NA	NA	False	NA	NA	NA	103298864	103331994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103298996_103299955_103300085_103300199_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_91718.known	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	4.7169905660283	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	27	True	NA	18	True	AATAAA	-19	NA	103298897	103332866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_91720.known	chr8	+	3646	6	FSM	ENSG00000164930.12	ENST00000522484.5	3646	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	27.2983515985856	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	20	False	NA	18	True	AATAAA	-19	NA	103298830	103332866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103329654_103330066_103331340
transcript_9173.known	chr1	-	6110	9	FSM	ENSG00000159173.19	ENST00000361379.9	6110	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTGTAAACCTTACTT	-1	True	NA	NA	False	AATACA	-16	NA	201421730	201403783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201409251_201410325_201410436_201411356_201411534_201413031_201413122_201414517_201414650_201415212_201415255_201417115_201417120_201417782_201417813_201421672
transcript_91730.known	chr8	+	1970	11	FSM	ENSG00000164934.14	ENST00000612750.5	1970	11	0	0	0	0	multi-exon	FALSE	canonical	1	730	junction_2	373.211950505339	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTATTTTTGGTAA	-16	True	NA	14	True	ATTAAA	-21	NA	103415385	103443453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103427253_103430611_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_91737.known	chr8	+	5300	10	FSM	ENSG00000164934.14	ENST00000518554.2	5300	10	0	0	0	0	multi-exon	FALSE	canonical	1	730	junction_2	391.914673253134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGGCCTATTTTTGG	10	True	NA	11	True	ATTAAA	-18	NA	103415411	103443450	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_9174.known	chr1	-	6142	8	FSM	ENSG00000159173.19	ENST00000622580.4	6142	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	0.989743318610787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTGCATGCATTTTG	8501	False	NA	NA	False	AATACA	-32	NA	201421746	201403767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201409251_201410325_201410436_201411356_201411534_201413031_201413122_201414517_201414650_201415212_201415259_201417782_201417813_201421672
transcript_91744.known	chr8	-	2891	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.5255294853706	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTGTGTGATAGATAA	28	True	NA	-1	True	AATAAA	-28	NA	103415107	103398637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
transcript_91751.known	chr8	+	1062	6	FSM	ENSG00000176406.23	ENST00000523362.5	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.91291198206288	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCAACCTTGGCCCCTCT	0	True	NA	NA	False	NA	NA	NA	104223363	104251736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
transcript_91756.known	chr8	-	2122	10	FSM	ENSG00000147647.13	ENST00000351513.7	2122	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.81216738114445	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTATTATCTGATTTAT	-4	True	NA	NA	False	AATAAA	-20	NA	104467055	104379430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_104379844_104381183_104381315_104392783_104392992_104424246_104424390_104427979_104428122_104429544_104429702_104444247_104444438_104447323_104447504_104451245_104451405_104466656
transcript_91757.known	chr8	-	4092	6	FSM	ENSG00000147650.12	ENST00000424843.6	4092	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	21.7752152687407	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTTTATTTGTTGAA	-20	True	NA	0	True	ATTAAA	-41	NA	104589024	104489230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104588818
transcript_91758.known	chr8	+	2621	6	FSM	ENSG00000164830.19	ENST00000449762.6	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	37.3127324113365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	NA	False	NA	NA	False	AATAAA	-6	NA	106726011	106752679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_106726310_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_9176.nnic	chr1	-	1080	3	NNC	ENSG00000174307.7	novel	896	3	NA	NA	4	361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	115	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTGAGTGAAATTCTT	11	True	NA	-1	True	AATGAA	-30	NA	201469184	201465491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_201466179_201468340_201468613_201469063
transcript_91760.known	chr8	+	1174	2	FSM	ENSG00000164830.19	ENST00000661818.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTATTGTTTTGTTT	77	False	NA	NA	False	AATAAA	-17	NA	106270290	106272902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_106270368_106271805
transcript_91762.known	chr8	+	1148	2	FSM	ENSG00000164830.19	ENST00000658832.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	76	False	NA	15	True	AATAAA	-17	NA	106270289	106272774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_106270368_106271704
transcript_91763.known	chr8	-	4230	9	FSM	ENSG00000154188.10	ENST00000517746.6	4230	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	4.32290411644765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATTTTATTTTTAATAC	-2	True	NA	NA	False	AATAAA	-23	NA	107497918	107249481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321895_107322129_107336149_107336272_107346941_107347098_107497261
transcript_91764.known	chr8	-	4353	9	FSM	ENSG00000154188.10	ENST00000297450.7	4353	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	4.54835134966506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAACTTCATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	107498055	107249492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321898_107322129_107336149_107336272_107346941_107347098_107497261
transcript_91769.known	chr8	-	2105	14	FSM	ENSG00000104408.11	ENST00000677674.1	2105	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1429.34678671286	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-4	True	NA	NA	False	NA	NA	NA	108248719	108201215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108219749_108219831_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_9177.known	chr1	-	2749	2	FSM	ENSG00000174307.7	ENST00000367311.5	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGATCAATTGGTGAT	7	True	NA	NA	False	NA	NA	NA	201469188	201464277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201466179_201468340
transcript_91770.known	chr8	-	1732	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1362.911224518	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-1	True	NA	-24	True	AATAAA	-18	NA	108248716	108201739	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
transcript_91772.known	chr8	-	1609	14	FSM	ENSG00000104408.11	ENST00000676642.1	1609	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	1594.511570334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATTACGTATAAATTT	-1	True	NA	0	True	AATAAA	-36	NA	108248716	108201793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235098_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
transcript_91775.known	chr8	-	1501	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1089.03827029479	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	NA	False	NA	-27	True	AATAAA	-15	NA	108248730	108201742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91776.known	chr8	-	1275	13	FSM	ENSG00000104408.11	ENST00000677272.1	1275	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	1098.02203479206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAGATGAAAAAAA	-4	True	NA	-84	True	NA	NA	NA	108248719	108201877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241885_108241914_108248612
transcript_91777.known	chr8	-	1485	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	1096.95297681046	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	-3	True	NA	17	True	TATAAA	-40	NA	108248718	108201776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
transcript_9178.known	chr1	-	1820	6	FSM	ENSG00000159176.14	ENST00000340006.7	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	14.2351677194194	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTCCAATCCTGTG	-11	True	NA	-2	True	AATAAA	-17	NA	201507123	201483529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201484790_201485282_201485377_201488854_201488985_201490175_201490345_201496191_201496305_201507069
transcript_91784.known	chr8	-	1394	12	FSM	ENSG00000104408.11	ENST00000519030.6	1394	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	1128.63616958956	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	108248733	108201744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108248612
transcript_91786.known	chr8	-	2307	12	FSM	ENSG00000104408.11	ENST00000523674.2	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_3	293.142647136591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-4	True	NA	NA	False	NA	NA	NA	108248719	108201215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91787.known	chr8	-	2485	12	FSM	ENSG00000104408.11	ENST00000678901.1	2485	12	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_3	288.585979854523	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTACATTTTGGAAACA	-3	True	NA	-19	True	AATAAA	-17	NA	108248718	108201812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91791.known	chr8	-	1158	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1267.20611320074	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-4	True	NA	-27	True	AATAAA	-15	NA	108248719	108201742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_91793.known	chr8	-	1121	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	1195.44651046168	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-11	True	NA	-29	True	AATAAA	-13	NA	108248726	108201744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
transcript_91795.known	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1639.94165749883	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	NA	False	NA	0	True	ATTAAA	-19	NA	108248730	108230121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_918.known	chr1	+	1777	14	FSM	ENSG00000184908.20	ENST00000684624.1	1777	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.64059541036247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTGTCTGGTTCCCAGT	9	True	NA	-38	True	NA	NA	NA	16048999	16057252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16049032_16049119_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055674_16055759_16056421_16056509_16056868
transcript_9180.known	chr1	+	11416	24	FSM	ENSG00000198700.10	ENST00000361565.9	11416	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	223.754447844186	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCGTAGTGCTGCCTC	-24	True	NA	4	True	AATAAA	-17	NA	201829156	201884291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874831_201874937_201875151_201875229_201875943
transcript_91804.known	chr8	+	3527	11	FSM	ENSG00000104412.8	ENST00000220853.8	3527	11	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_9	34.626001790562	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTCCTGTTACTT	-15	True	NA	8	True	AATAAA	-21	NA	108443623	108489196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872_108455931_108469825_108469912_108470061_108470122_108475881_108475964_108476781_108476893_108479005_108479111_108486511
transcript_91809.known	chr8	+	532	5	FSM	ENSG00000104412.8	ENST00000517593.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_2	15.8823801742686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGATGGGCCACAGTT	-6	True	NA	NA	False	ATTAAA	-28	NA	108443632	108456073	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872
transcript_91811.known	chr8	-	6283	2	FSM	ENSG00000164841.5	ENST00000297459.4	6283	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTTTGTCATTCTTCT	-7	True	NA	0	True	ATTAAA	-19	NA	108787594	108778973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_108785138_108787475
transcript_91814.known	chr8	-	3919	10	FSM	ENSG00000120526.12	ENST00000239690.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_3	30.6718997145395	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGAGTCATTAACAAT	1	True	NA	-4	True	AATAAA	-23	NA	109334087	109240918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_109243302_109245321_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_91817.known	chr8	-	2542	9	FSM	ENSG00000120526.12	ENST00000676569.1	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	31.1648840844948	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTATAGGGGAATTCTA	-33	True	NA	NA	False	NA	NA	NA	109334121	109244349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_91821.known	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	1186.13729706978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	-30	True	NA	-14	True	NA	NA	NA	109334323	109343624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_91822.known	chr8	+	546	5	FSM	ENSG00000120533.13	ENST00000339942.11	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1342.21707912692	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTTGGATTTTGAAA	-15	True	NA	32	True	AATAAA	-21	NA	109334338	109343670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334403_109336132_109336205_109339319_109339391_109340490_109340564_109343404
transcript_91824.known	chr8	+	2966	5	FSM	ENSG00000120533.13	ENST00000517311.5	2966	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	1038.3933503254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGACTCACATGATTGA	-28	True	NA	15	True	AATAAA	-15	NA	109334325	109345953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_91825.known	chr8	+	1540	5	FSM	ENSG00000120533.13	ENST00000523335.1	1540	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	1061.49458312325	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	-3	True	NA	NA	False	NA	NA	NA	109334350	109344599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340490_109340564_109343404
transcript_91829.known	chr8	+	541	4	FSM	ENSG00000120533.13	ENST00000522407.5	541	4	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_1	1336.11285285172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTGGATTTTGAAAT	-7	True	NA	33	True	AATAAA	-22	NA	109334346	109343671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109334475_109339319_109339391_109340488_109340564_109343404
transcript_91830.known	chr8	+	1467	7	FSM	ENSG00000147654.15	ENST00000395785.6	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	42.3975890299856	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTGTACATCATTA	-11	True	NA	NA	False	ATTAAA	-22	NA	109539710	109565160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109539920_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_91833.known	chr8	+	2383	7	FSM	ENSG00000147654.15	ENST00000337573.10	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	54.6066743987298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCTCAAAGTTTTAATA	21	True	NA	NA	False	AATAAA	-19	NA	109540172	109565996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_109540462_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_91861.known	chr8	+	730	3	FSM	ENSG00000254339.6	ENST00000519248.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	699.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAAAAAGTCTTCTT	51	False	NA	NA	False	NA	NA	NA	114282135	114287996	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284218_114284515_114287721
transcript_91864.known	chr8	+	866	3	FSM	ENSG00000254339.6	ENST00000521523.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_2	493.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTTATCATGGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	114282066	114295807	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284218_114284515_114295465
transcript_91866.nnic	chr8	+	1115	3	FSM	ENSG00000254339.6	ENST00000688540.1	926	3	-189	0	-169	0	multi-exon	FALSE	canonical	3	58	junction_2	804.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	114281867	114304805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284218_114284515_114304413
transcript_91867.nnic	chr8	+	865	3	NIC	ENSG00000254339.6	novel	730	3	NA	NA	-169	-152	combination_of_known_splicesites	FALSE	canonical	3	159	junction_2	754	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATCATATTCTTCATC	NA	False	NA	23	True	ATTAAA	-20	NA	114281867	114287844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_114282295_114284218_114284534_114287721
transcript_91870.known	chr8	+	697	3	FSM	ENSG00000254339.6	ENST00000507929.3	1734	3	0	1037	0	-183	multi-exon	FALSE	canonical	3	736	junction_2	465.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAAGTTTGAATAGC	NA	False	NA	NA	False	NA	NA	NA	114282071	114295624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284218_114284534_114295465
transcript_91872.nnic	chr8	+	1134	3	FSM	ENSG00000254339.6	ENST00000692282.1	925	3	-209	0	-169	0	multi-exon	FALSE	canonical	3	152	junction_2	757.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	114281867	114304805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284218_114284534_114304413
transcript_91882.known	chr8	+	836	3	FSM	ENSG00000254339.6	ENST00000523682.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	184	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATGGAAGTATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	114282068	114295813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284252_114284515_114295465
transcript_91887.known	chr8	+	877	3	FSM	ENSG00000254339.6	ENST00000520543.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	212	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGAATATTGATTAT	NA	False	NA	NA	False	NA	NA	NA	114282072	114295839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_114282295_114284252_114284534_114295465
transcript_91896.nnic	chr8	-	659	4	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTTGATGAATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	114504516	114302883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chr8_-_114303145_114304406_114304496_114394909_114394988_114504285
transcript_91898.known	chr8	-	1265	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	730.318156268212	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGATGTATTTTCTCT	-11	True	NA	-11	True	AATAAA	-33	NA	116755823	116644816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726161_116737712_116737716_116755665
transcript_91903.known	chr8	-	3961	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	0	0	0	multi-exon	FALSE	canonical	3	1614	junction_4	62.1334968319942	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATGTAATACACTGT	-11	True	NA	-2	True	AATAAA	-16	NA	116755823	116642129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
transcript_91905.known	chr8	-	3660	14	FSM	ENSG00000164754.16	ENST00000297338.7	3660	14	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_13	99.8070327531194	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTATTCATTAT	11	True	NA	-7	True	AATAAA	-20	NA	116874776	116845933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_116847692_116848945_116849030_116850617_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_9191.known	chr1	+	914	5	FSM	ENSG00000198892.7	ENST00000464117.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	48.2623041306567	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAAGATCCCAGCCAG	2	True	NA	NA	False	NA	NA	NA	201888679	201892137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201888782_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_91911.known	chr8	+	3672	3	FSM	ENSG00000147679.12	ENST00000309822.7	3672	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	20.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATCTCCTTGTACTTC	-10	True	NA	NA	False	ATTAAA	-17	NA	116766523	116774684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_116766792_116770191_116770367_116771455
transcript_91915.known	chr8	+	2291	2	FSM	ENSG00000205002.4	ENST00000378279.4	2291	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCTGAGAATTATCTGG	0	True	NA	NA	False	AATAAA	-45	NA	116938206	116944487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_116938568_116942557
transcript_91917.known	chr8	+	985	4	FSM	ENSG00000164758.7	ENST00000297347.7	985	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	12.2836838484589	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATTAATGGATTTAC	-16	True	NA	15	True	AATAAA	-21	NA	117520712	117540262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_117521054_117528650_117528810_117530722_117530828_117539882
transcript_91918.known	chr8	-	782	5	FSM	ENSG00000177570.15	ENST00000524796.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.55521678957215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAAATCTTGCTTTGCT	-6	True	NA	NA	False	AAAAAG	-28	NA	118621949	118197546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_118197733_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_91921.nic	chr8	-	808	5	NIC	ENSG00000177570.15	novel	780	5	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	7.07106781186548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAAGGAAAAAGGGTGA	125	False	NA	NA	False	AATAAA	-15	NA	118622005	118375700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_118375857_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_91924.known	chr8	-	2087	5	FSM	ENSG00000164761.9	ENST00000297350.9	2087	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1.80277563773199	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTCTGTTGCTTTT	-1	True	NA	-4	True	ATTAAA	-20	NA	118951885	118923556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_118924763_118926493_118926719_118928737_118928930_118932930_118933301_118951791
transcript_91925.known	chr8	+	2826	4	FSM	ENSG00000147676.14	ENST00000614891.5	2826	4	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_2	207.949245944507	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	-4	True	NA	27	True	AATAAA	-16	NA	119208362	119245673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_119208605_119221586_119221758_119240164_119240321_119243416
transcript_91927.known	chr8	+	892	4	FSM	ENSG00000147676.14	ENST00000531508.1	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	776.346572092645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTAATTTTATTATGAT	326	False	NA	-22	True	NA	NA	NA	119208867	119243648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_119209201_119221586_119221758_119240164_119240321_119243416
transcript_9193.known	chr1	-	3927	3	FSM	ENSG00000163431.13	ENST00000367288.5	3927	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTTGTTTGTTGGT	-20	True	NA	NA	False	AATAAA	-13	NA	201946548	201896455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_201898399_201899236_201900752_201946079
transcript_91931.known	chr8	-	3086	25	FSM	ENSG00000136960.13	ENST00000075322.11	3086	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_24	14.1860161974938	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	1	True	NA	-10	True	AATAAA	-17	NA	119638839	119557085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119638747
transcript_91932.known	chr8	-	5027	26	FSM	ENSG00000064313.13	ENST00000378164.7	5027	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	31.9263151647665	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	-3	True	NA	-18	True	AATAAA	-17	NA	119832841	119730773	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_91936.known	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_7	19.0394327646598	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-4	True	NA	-40	True	AATAAA	-15	NA	119855894	119833975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
transcript_91943.known	chr8	+	2569	9	FSM	ENSG00000155792.10	ENST00000286234.6	2569	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	6.46988214730377	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCTTTTCATTAGGT	-1	True	NA	18	True	AATAAA	-20	NA	119873721	120050918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_119873969_119928399_119928579_119929814_119929939_119965231_119965411_120001524_120001711_120002976_120003112_120006804_120006876_120009028_120009134_120049575
transcript_91945.nic	chr8	+	772	3	ISM	ENSG00000155792.10	ENST00000286234.6	2569	9	-5	120763	0	-119436	5prime_fragment	FALSE	canonical	3	26	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTATTTAAGTTGAT	-6	True	NA	NA	False	AATAAA	-19	NA	119873716	119930155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_119873969_119928399_119928579_119929814
transcript_91947.nic	chr8	+	642	5	ISM	ENSG00000187955.13	ENST00000432943.6	3828	27	-41	109687	1	-48314	5prime_fragment	FALSE	canonical	3	69	junction_4	8.84590300647707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGATCCAAAGCCCAGA	-1	True	NA	NA	False	NA	NA	NA	120125102	120168178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160
transcript_91948.nic	chr8	+	542	4	ISM	ENSG00000187955.13	ENST00000432943.6	3828	27	0	115337	0	-53964	5prime_fragment	FALSE	canonical	3	84	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGATAAAGAAAGCAAGC	-3	True	NA	-35	True	NA	NA	NA	120125143	120162528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425
transcript_91949.known	chr8	+	8009	48	FSM	ENSG00000187955.13	ENST00000297848.8	8009	48	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_5	15.5711832368967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTCTTCAGAATTCTC	-2	True	NA	NA	False	AATAAA	-18	NA	120125101	120373573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120371151
transcript_91952.known	chr8	+	3067	22	FSM	ENSG00000172167.8	ENST00000305949.6	3067	22	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	15.613239338151	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGATTTCATGTCTT	1	True	NA	NA	False	AATAAA	-19	NA	120445418	120523636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463691_120463762_120470819_120470938_120488158_120488333_120490462_120490571_120497392_120497555_120502491_120502610_120506705_120506862_120509933_120510030_120515924_120516192_120517850_120518101_120518703_120518818_120522653_120522720_120523297
transcript_91960.known	chr8	-	1260	7	FSM	ENSG00000172172.8	ENST00000306185.8	1260	7	0	0	0	0	multi-exon	FALSE	canonical	3	1672	junction_1	70.2724855275678	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-2	True	NA	NA	False	NA	NA	NA	120445150	120395436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120445067
transcript_91964.known	chr8	-	1418	6	FSM	ENSG00000172172.8	ENST00000518696.5	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	692.265440420075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-13	True	NA	NA	False	NA	NA	NA	120445402	120395436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120443184_120443309_120445067
transcript_91967.known	chr8	+	1219	11	FSM	ENSG00000172167.8	ENST00000523373.5	1219	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	26.4801812682617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTACATGTTTCGG	4	True	NA	NA	False	AATATA	-28	NA	120445421	120470937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463686_120463762_120470819
transcript_91969.known	chr8	+	1462	4	FSM	ENSG00000248690.8	ENST00000656304.1	1462	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTACTCTGATAACACA	291	False	NA	-11	True	ATTAAA	-7	NA	121641319	121645299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_121641455_121642583_121642732_121643372_121643518_121644265
transcript_9197.known	chr1	+	1650	6	FSM	ENSG00000134375.11	ENST00000367287.5	1650	6	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	50.4396669299075	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTGTATAATTCAG	-8	True	NA	NA	False	CATAAA	-18	NA	201955502	201970664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201963615_201963745_201965432_201965544_201969468
transcript_91970.known	chr8	-	4240	4	FSM	ENSG00000170961.7	ENST00000303924.5	4240	4	0	0	0	0	multi-exon	FALSE	canonical	3	2489	junction_1	243.028576280422	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTTTTTTTCTAAG	-2	True	NA	-36	True	AATAAA	-16	NA	121641440	121612115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_121615039_121617104_121617207_121628713_121629341_121640852
transcript_91975.nic	chr8	-	1980	3	ISM	ENSG00000170961.7	ENST00000303924.5	4240	4	-1	4327	-1	-4327	5prime_fragment	FALSE	canonical	3	2820	junction_1	131.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAAAG	-3	True	NA	NA	False	NA	NA	NA	121641441	121616442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_121617207_121628713_121629341_121640852
transcript_91976.nic	chr8	-	900	2	ISM	ENSG00000170961.7	ENST00000303924.5	4240	4	-101	17014	-101	-17014	5prime_fragment	FALSE	canonical	3	3083	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAATCCCTAGAAACC	3	True	NA	NA	False	NA	NA	NA	121641541	121629129	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_121629341_121640852
transcript_91977.nnic	chr8	-	1210	3	NNC	ENSG00000255364.1	novel	553	3	NA	NA	-143029	-1690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCATGTATGCACA	0	True	NA	NA	False	AATAAA	-42	NA	122571580	122416021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_122417023_122567576_122567690_122571484
transcript_91979.known	chr8	+	4361	4	FSM	ENSG00000178764.8	ENST00000314393.6	4361	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	19.8662192343351	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCCTCTACTTCGCCT	3	True	NA	25	True	AATAAA	-24	NA	122781654	122974510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_122781947_122863476_122863540_122951291_122954029_122973241
transcript_91980.known	chr8	+	3478	22	FSM	ENSG00000156787.17	ENST00000287380.6	3478	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_19	52.6221718529513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	-12	True	NA	14	True	AATAAA	-22	NA	123072706	123152153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_91984.nic	chr8	+	1380	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-10	1409	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCATTCTCAGAAGATTC	-47	True	NA	NA	False	AATACA	-15	NA	123072671	123102496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_91985.nic	chr8	+	2236	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-10	-849	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATCTGCTCTTACTGA	-47	True	NA	4	True	AATAAA	-15	NA	123072671	123103352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_91986.nic	chr8	+	3085	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	-47	True	NA	9	True	AATAAA	-33	NA	123072671	123104201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_91990.nnic	chr8	+	428	3	NNC	ENSG00000156787.17	novel	1159	7	NA	NA	-10	-6789	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	110	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGTAGTTTCCTTTTT	-47	True	NA	4	True	ATTAAA	-19	NA	123072671	123077480	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_123072847_123077110_123077258_123077374
transcript_91991.known	chr8	-	3213	8	FSM	ENSG00000136986.10	ENST00000259512.9	3213	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	24.5581359393649	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTGAGGAGTCATAT	-18	True	NA	NA	False	AATGAA	-17	NA	123042302	123013169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_91992.known	chr8	-	1994	8	FSM	ENSG00000136986.10	ENST00000405944.7	1994	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	122.542620657268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTTCACACAGTTAT	230	False	NA	-1	True	AATAAA	-15	NA	123042122	123014148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123015586_123019194_123019246_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_92.known	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	5946	junction_1	21.5	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_-_1168_1532_1765_1902
transcript_920.known	chr1	+	2129	13	FSM	ENSG00000184908.20	ENST00000375667.7	2129	13	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_9	5.67646212197547	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCCATCCCTCATC	5	False	NA	18	True	AATAAA	-14	NA	16048788	16057308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_92002.known	chr8	-	918	4	FSM	ENSG00000136986.10	ENST00000419562.6	918	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	150.851656345637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGGTTTTAGCGGGT	-18	True	NA	36	True	NA	NA	NA	123042302	123015164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123041969
transcript_92003.known	chr8	-	1310	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	13.6879509058149	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTGCATTCAGTTTA	-17	True	NA	-19	True	TATAAA	-43	NA	123241377	123219966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_92004.known	chr8	-	569	6	FSM	ENSG00000189376.12	ENST00000519791.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	72.7725222869182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTGAAGACAAGTGG	74	False	NA	NA	False	NA	NA	NA	123241286	123220194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123220298_123226499_123226633_123231721_123231758_123237797_123237942_123239048_123239145_123241229
transcript_92007.nic	chr8	-	1220	6	NIC	ENSG00000189376.12	novel	948	5	NA	NA	-13	169	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	71.0588488507941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTAGCAGTTCTAT	NA	False	NA	-1	True	AATAAA	-19	NA	123241390	123226190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_123226419_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_92009.nnic	chr8	-	1187	5	NIC	ENSG00000189376.12	novel	1310	6	NA	NA	-13	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	75.2541527093356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTACTGCATTCAGT	NA	False	NA	-22	True	TATAAA	-40	NA	123241390	123219969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_123220298_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_92013.known	chr8	-	5547	28	FSM	ENSG00000156802.13	ENST00000287394.10	5547	28	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_18	20.3469899493758	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	-5	True	NA	0	True	AATAAA	-26	NA	123396447	123319849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372_123336533_123337624_123337822_123339310_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_92021.nic	chr8	-	785	6	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-80	26456	-34	1693	5prime_fragment	FALSE	canonical	3	182	junction_4	13.614697940094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAACAGAAAGATATT	-3	True	NA	-11	True	TTTAAA	-32	NA	123396481	123370968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_92022.nic	chr8	-	469	3	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-80	28149	-34	0	5prime_fragment	FALSE	canonical	3	182	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGCACAG	-3	True	NA	NA	False	AATATA	-27	NA	123396481	123372661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_123372687_123380528_123380678_123396186
transcript_92030.known	chr8	+	909	7	FSM	ENSG00000156795.8	ENST00000517609.5	909	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	56.3579827728266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTACTTGCTAAGATATT	-10	True	NA	46	True	CATAAA	-40	NA	123416791	123441623	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_92032.known	chr8	+	1519	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	18.1835090122891	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	-28	True	NA	NA	False	NA	NA	NA	123416773	123442240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_92033.known	chr8	+	1491	6	FSM	ENSG00000156795.8	ENST00000523984.5	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	35.1965907439911	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	0	True	NA	NA	False	NA	NA	NA	123416725	123442240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_92037.known	chr8	+	341	3	FSM	ENSG00000156795.8	ENST00000522194.5	341	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	24.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATTATGACTTGTAACCC	-31	True	NA	NA	False	AATACA	-12	NA	123416770	123430061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123416933_123427923_123428024_123429982
transcript_92039.known	chr8	+	5529	24	FSM	ENSG00000176853.16	ENST00000334705.12	5529	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_14	12.5936942243133	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAATTTTCTGAAAG	-40	True	NA	33	True	AATAAA	-30	NA	123768438	123815452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_123768775_123774079_123774165_123775146_123775299_123777264_123777323_123778024_123778093_123778658_123778773_123779984_123780076_123780479_123780543_123784469_123784577_123785080_123785120_123785628_123785742_123786494_123786611_123787260_123787374_123787663_123787751_123789612_123789746_123798089_123798239_123799519_123799655_123799771_123799886_123805266_123805340_123806079_123806230_123808271_123808377_123808892_123809017_123810281_123810352_123812518
transcript_92041.known	chr8	+	2207	1	FSM	ENSG00000183665.5	ENST00000328599.4	2207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTTAAGAATCACCAGT	0	True	NA	NA	False	TATAAA	-22	NA	124450819	124453026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124450800_124453000
transcript_92042.known	chr8	-	1767	1	FSM	ENSG00000245149.5	ENST00000530778.1	1767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGCTTCAGTCTTTA	-26	True	NA	NA	False	AATAAA	-30	NA	124474576	124472809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124472800_124474600
transcript_92060.known	chr8	+	1423	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	1300.3032979527	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATACAGGACTTTTT	37	True	NA	NA	False	NA	NA	NA	124539177	124550768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
transcript_92062.known	chr8	+	636	4	FSM	ENSG00000147684.10	ENST00000517367.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1413.33246855319	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATGACTGACGTTC	3	True	NA	15	True	AATAAA	-17	NA	124539143	124549978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124539288_124543119_124543280_124546999_124547114_124549760
transcript_92064.known	chr8	+	3199	2	FSM	ENSG00000170881.5	ENST00000303545.4	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATTGTTATATAGTGT	-3	True	NA	NA	False	NA	NA	NA	124474879	124488618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124475291_124485830
transcript_92066.known	chr8	-	1029	12	FSM	ENSG00000147687.19	ENST00000276692.11	1029	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_10	48.0462931035448	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-14	True	NA	NA	False	AATAAA	-25	NA	124539085	124488497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_92067.known	chr8	-	915	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	128.569431691332	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATACTATATATCGG	-17	True	NA	NA	False	AATAAA	-22	NA	124539088	124488500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
transcript_92068.known	chr8	-	726	9	FSM	ENSG00000147687.19	ENST00000605953.5	726	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_7	46.3530945568902	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTTTGCATTG	-11	True	NA	-30	True	ATTAAA	-1	NA	124539082	124504173	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_92069.known	chr8	-	990	13	FSM	ENSG00000147687.19	ENST00000522810.5	990	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	143.52591229461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATACTATTAAAGTATT	1	True	NA	NA	False	AATACA	-7	NA	124539070	124488629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504274_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_92070.known	chr8	+	2962	11	FSM	ENSG00000104549.12	ENST00000265896.10	2962	11	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_1	37.4460945894228	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTCTTTTTGTTTC	0	True	NA	14	True	AATAAA	-13	NA	124998504	125022283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124999695_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_92073.known	chr8	+	1879	11	FSM	ENSG00000104549.12	ENST00000523430.5	1879	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	299.118120480856	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCGTGTCTTTTTGTT	NA	False	NA	12	True	AATAAA	-11	NA	124998496	125022281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_124998606_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_92079.known	chr8	+	1188	8	FSM	ENSG00000156831.8	ENST00000287437.8	1188	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	30.5654199702733	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	5	True	NA	11	True	AATAAA	-17	NA	125091859	125367120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_9208.known	chr1	+	3104	9	FSM	ENSG00000163435.16	ENST00000367284.10	3104	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	17.1021745693347	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTTGTGTGTGGATT	2	True	NA	NA	False	GATAAA	-19	NA	202010586	202017183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202010707_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_92082.nic	chr8	+	1254	8	NIC	ENSG00000156831.8	novel	1188	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	51.6601927039	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	7	False	NA	11	True	AATAAA	-17	NA	125091830	125367120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_92086.known	chr8	+	1037	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	49.340371119624	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGTTCTATAATG	15	True	NA	-34	True	AAAACA	-42	NA	125091869	125367075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_92093.known	chr8	+	1183	5	FSM	ENSG00000156831.8	ENST00000520866.5	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	38.1469199280886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTTAGTGGACATAA	-11	True	NA	NA	False	AATAAA	-12	NA	125091843	125182796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_92096.nic	chr8	+	808	5	ISM	ENSG00000156831.8	ENST00000517532.5	841	7	-13	175400	-13	-59	5prime_fragment	FALSE	canonical	3	42	junction_1	65.2930892208356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAGTTGCGTTTTATTG	7	False	NA	16	True	TATAAA	-30	NA	125091830	125182371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102
transcript_92100.known	chr8	-	4139	29	FSM	ENSG00000164961.16	ENST00000318410.12	4139	29	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_17	38.9297345828851	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCTCGCTTATGATTCA	-26	True	NA	-1	True	AGTAAA	-22	NA	125091792	125024259	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
transcript_92102.known	chr8	+	3721	3	FSM	ENSG00000136997.21	ENST00000621592.8	3721	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	65.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACTCCTAGAATAATC	-2	True	NA	NA	False	AATAAA	-17	NA	127736230	127742951	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127736624_127738247_127739020_127740395
transcript_92108.known	chr8	+	1581	8	FSM	ENSG00000249859.13	ENST00000657289.1	1581	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	35.26112503559	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-6	True	NA	38	True	ATTAAA	-18	NA	127794532	128101256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_9211.nic	chr1	+	1766	8	NIC	ENSG00000163435.16	novel	4994	8	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	34.1234254327626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAGCTACCTGTGTAC	-5	True	NA	14	True	AATAAA	-27	NA	202010579	202016009	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_202010707_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_92110.known	chr8	+	1610	8	FSM	ENSG00000249859.13	ENST00000652816.1	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	34.5454447807818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-2	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128009589_128009719_128010317_128010445_128070159_128070362_128096517_128096655_128100979
transcript_92111.known	chr8	+	1269	7	FSM	ENSG00000249859.13	ENST00000667714.1	1269	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	36.9086710679212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGTGGTCTTTCTTTAT	136	False	NA	37	True	ATTAAA	-17	NA	127794674	128101255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_92112.known	chr8	+	1433	7	FSM	ENSG00000249859.13	ENST00000668123.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	40.4162371111194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGTGGTCTTTCTTTAT	-2	True	NA	37	True	ATTAAA	-17	NA	127795807	128101255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096520_128096655_128100979
transcript_92113.known	chr8	+	1454	7	FSM	ENSG00000249859.13	ENST00000657451.1	1454	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	37.7686672020899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	7	True	NA	36	True	ATTAAA	-16	NA	127795762	128101254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796009_127890588_127890999_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_92114.known	chr8	+	1321	6	FSM	ENSG00000249859.13	ENST00000670223.1	1321	6	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	32.9581552881832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-2	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
transcript_92115.known	chr8	+	1275	6	FSM	ENSG00000249859.13	ENST00000653522.1	1275	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	30.348640826238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-12	True	NA	38	True	ATTAAA	-18	NA	127794526	128101256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_92116.known	chr8	+	1152	5	FSM	ENSG00000249859.13	ENST00000662766.1	1152	5	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	38.4602067077128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-2	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128096517_128096655_128100979
transcript_92118.known	chr8	+	861	3	FSM	ENSG00000249859.13	ENST00000664214.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTATCTTATAAT	-12	True	NA	NA	False	AATAAA	-28	NA	127794526	127932707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127890588_127890999_127932464
transcript_92119.known	chr8	+	1516	3	FSM	ENSG00000249859.13	ENST00000669416.1	1516	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTATCTTATAATACA	124	False	NA	NA	False	AATAAA	-31	NA	127795148	127932710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127796009_127890588_127890999_127932464
transcript_92120.known	chr8	+	1017	4	FSM	ENSG00000249859.13	ENST00000504719.7	1017	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATATTTCTATCTTATAA	-4	True	NA	NA	False	AATAAA	-27	NA	127794534	127932706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127794735_127855154_127855320_127890588_127890999_127932464
transcript_92121.known	chr8	+	164	1	FSM	ENSG00000207110.1	ENST00000384382.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATTTTTAAAAATAAA	11	True	NA	-31	True	NA	NA	NA	127999130	127999294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_127999100_127999300
transcript_92127.nic	chr8	-	1920	14	NIC	ENSG00000153310.20	novel	2024	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_12	350.52040769835	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-7	True	NA	-6	True	AATAAA	-22	NA	130016453	129841469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016369
transcript_92128.known	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	375.780702131808	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-6	True	AATAAA	-22	NA	130016672	129841469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
transcript_9213.known	chr1	+	762	2	FSM	ENSG00000163435.16	ENST00000498017.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTGCTGTGAGCCGAG	0	True	NA	NA	False	NA	NA	NA	202010624	202011808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202010707_202011128
transcript_92132.known	chr8	-	2021	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_12	261.821451035285	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCAGCTTTCATT	22	False	NA	-33	True	NA	NA	NA	129939872	129841496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
transcript_92133.known	chr8	-	1817	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_11	346.578514433118	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-5	True	NA	-20	True	AATAAA	-8	NA	130016451	129841483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
transcript_92134.nic	chr8	-	1840	13	NIC	ENSG00000153310.20	novel	1902	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_12	375.219741173977	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-6	True	AATAAA	-22	NA	130016697	129841469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016606
transcript_9214.known	chr1	-	5296	2	FSM	ENSG00000234678.2	ENST00000419190.2	5296	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTATTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202010463	201995695	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202000328_202009799
transcript_92140.known	chr8	-	3798	12	FSM	ENSG00000153310.20	ENST00000519824.6	3798	12	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_11	212.971538082106	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACTCATTTGTTGACA	-41	True	NA	-9	True	AATAAA	-18	NA	129939832	129839592	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129939607
transcript_92142.nic	chr8	-	1878	12	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	384	junction_11	293.338097882668	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	6	True	NA	-6	True	AATAAA	-22	NA	129939785	129841469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_92148.nic	chr8	-	1810	11	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	425	junction_9	249.174416824842	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-13	True	NA	-6	True	AATAAA	-22	NA	129939804	129841469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129939607
transcript_9215.known	chr1	-	1789	7	FSM	ENSG00000143862.8	ENST00000272217.7	1789	7	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	45.5228880161764	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-21	True	NA	-7	True	AATAAA	-20	NA	202144737	202133403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202134517_202135149_202135221_202135458_202135527_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_92150.known	chr8	-	1700	11	FSM	ENSG00000153310.20	ENST00000522941.5	1700	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	396.234728412339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAAATAAAAATCAGCT	45	True	NA	-39	True	NA	NA	NA	129939746	129841502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_92152.known	chr8	-	1647	10	FSM	ENSG00000153310.20	ENST00000522250.5	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	340.862558739761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	200	False	NA	-20	True	AATAAA	-8	NA	129939694	129841483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129939607
transcript_92156.known	chr8	+	884	5	FSM	ENSG00000253507.6	ENST00000524275.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	388.892658711887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTTCATTGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	131308544	131317632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_131308672_131310552_131310713_131312555_131312730_131315759_131315884_131317333
transcript_92157.known	chr8	+	854	5	FSM	ENSG00000253507.6	ENST00000519695.6	1158	5	0	304	0	-49	multi-exon	FALSE	canonical	3	374	junction_1	278.30502600564	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGCACTTCAGCGGCT	NA	False	NA	NA	False	ATTAAA	-26	NA	131308544	131317583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_131308672_131310552_131310713_131312555_131312749_131315759_131315884_131317333
transcript_92163.nic	chr8	+	1328	4	ISM	ENSG00000253507.6	ENST00000524275.5	884	5	1692	-255	-235	0	3prime_fragment	FALSE	canonical	3	128	junction_2	420.590325878071	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	1631	False	NA	31	True	AATAAA	-20	NA	131310236	131317887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_+_131310713_131312555_131312730_131315759_131315884_131317333
transcript_92164.known	chr8	+	731	4	FSM	ENSG00000253507.6	ENST00000519005.1	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_2	212.39167173461	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAACTGAGGACAACAA	7	False	NA	NA	False	NA	NA	NA	131310471	131317506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_131310713_131312555_131312749_131315759_131315884_131317333
transcript_92165.nnic	chr8	+	1070	4	NNC	ENSG00000253507.6	novel	1158	5	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	318.422151658245	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	1812	False	NA	31	True	AATAAA	-20	NA	131310417	131317887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_131310713_131312651_131312749_131315759_131315884_131317333
transcript_92171.nnic	chr8	+	707	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	-10	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_2	499.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-3	True	NA	27	True	AATAAA	-22	NA	131310461	131315811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_131310713_131312555_131312749_131315548
transcript_92172.nnic	chr8	+	1022	3	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	557	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	1832	False	NA	31	True	AATAAA	-20	NA	131310437	131317887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_131310713_131312555_131312749_131317333
transcript_92174.nnic	chr8	+	805	2	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	-3	True	NA	31	True	AATAAA	-20	NA	131310461	131317887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_131310713_131317333
transcript_9218.known	chr1	-	1065	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_5	143.657091714959	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	7309	False	NA	-2	True	AATAAA	-18	NA	202341980	202331656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
transcript_92181.known	chr8	-	3343	12	FSM	ENSG00000129295.10	ENST00000620350.5	3343	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.61577310586391	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTATGGACTGAATAAT	3	True	NA	NA	False	ATTAAA	-18	NA	132675545	132570415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_132572481_132583693_132583780_132610165_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_92186.nic	chr8	-	2644	7	NIC	ENSG00000008513.16	novel	2906	12	NA	NA	9	0	intron_retention	FALSE	canonical	3	14	junction_3	3.63623737154524	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAACTTGGCACCGTGT	9733	False	NA	NA	False	AAAAAG	-14	NA	133489691	133458872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476601_133489537
transcript_92189.known	chr8	+	1978	9	FSM	ENSG00000131773.14	ENST00000355849.10	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	11.9576074111839	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGAGCTAAC	1	True	NA	14	True	AATAAA	-14	NA	135457455	135647610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_135457955_135521236_135521356_135542653_135542771_135548753_135548901_135557447_135557588_135581877_135582074_135606954_135607038_135645058_135645118_135646992
transcript_9219.known	chr1	-	1499	6	FSM	ENSG00000077152.11	ENST00000646595.1	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_5	164.213763125994	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-5	True	NA	-2	True	AATAAA	-18	NA	202341970	202331656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335819_202341894
transcript_92193.known	chr8	-	554	2	FSM	ENSG00000169436.17	ENST00000522546.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGTGTATGAGGAACAAA	NA	False	NA	NA	False	AATAAA	-17	NA	138779562	138777906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_138778407_138779508
transcript_92194.known	chr8	+	453	3	FSM	ENSG00000253574.5	ENST00000518354.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAATTTTCATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	139911237	139916620	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_139911301_139913924_139914092_139916397
transcript_92195.known	chr8	+	2481	3	FSM	ENSG00000104472.10	ENST00000220913.10	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	46.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTTTGGTGGCCTGTC	-7	True	NA	4	True	ATTAAA	-23	NA	140511321	140517154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_140511647_140514368_140514496_140515125
transcript_92197.known	chr8	+	811	3	FSM	ENSG00000104472.10	ENST00000519618.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	150	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAAGATCTGTACATA	-8	True	NA	NA	False	AATATA	-6	NA	140511981	140515765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_140512026_140514368_140514496_140515125
transcript_92198.known	chr8	+	1678	2	FSM	ENSG00000104472.10	ENST00000519533.1	1678	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAAAGTTTATAA	-18	True	NA	NA	False	NA	NA	NA	140511310	140516467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_140511647_140515125
transcript_92199.known	chr8	-	14595	19	FSM	ENSG00000123908.12	ENST00000220592.10	14595	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_10	11.9747677108324	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCTCTTCCAAAAATCT	6	True	NA	-12	True	AATAAA	-17	NA	140635633	140520155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140532153_140532415_140532616_140535467_140535570_140539319_140539455_140541163_140541359_140544212_140544304_140547467_140547628_140549113_140549299_140551302_140551437_140555895_140556019_140556166_140556287_140557088_140557237_140558484_140558573_140559394_140559530_140560373_140560511_140562452_140562635_140572811_140572933_140585118_140585312_140635484
transcript_9220.known	chr1	-	824	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	518.119677294735	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	7330	False	NA	-11	True	AATATA	-14	NA	202341959	202331737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
transcript_92206.nic	chr8	-	914	4	ISM	ENSG00000169398.19	ENST00000340930.7	4414	33	-88	220757	-13	0	5prime_fragment	FALSE	canonical	3	170	junction_3	95.5091618641898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	13	True	NA	-1	True	AATAAA	-17	NA	141001246	140879161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_140879638_140890542_140890770_140925660_140925750_141001124
transcript_92207.known	chr8	-	602	4	FSM	ENSG00000169398.19	ENST00000520045.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	167.113401284544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTGGAAGTAAGATAC	-26	True	NA	NA	False	NA	NA	NA	141001285	140879481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140879638_140890542_140890770_140948665_140948724_141001124
transcript_92208.known	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	79	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-25	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_140879638_140890542_140890770_141001124
transcript_92209.known	chr8	-	483	2	FSM	ENSG00000253210.3	ENST00000520885.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCGAGCACAGCATTGTG	1989	False	NA	-107	True	TATAAA	-25	NA	141128121	141126043	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_141126472_141128066
transcript_9221.known	chr1	+	1808	10	FSM	ENSG00000077157.22	ENST00000480184.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	3.05505046330389	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCCTTTTGGTTTGTT	13	True	NA	NA	False	AATAAA	-16	NA	202348719	202438242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820
transcript_92213.known	chr8	+	2849	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	34.2029238516241	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	-3	True	NA	8	True	AGTAAA	-21	NA	141392020	141432454	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_92214.known	chr8	+	1866	5	FSM	ENSG00000184489.13	ENST00000520105.5	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	76.3392919799496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	-29	True	NA	16	True	AATAAA	-13	NA	141391994	141431520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141430926
transcript_92216.known	chr8	-	2110	11	FSM	ENSG00000171045.16	ENST00000519651.5	2110	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	18.2164760587771	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTGGTACTGTATGG	-10	True	NA	9	True	TATAAA	-37	NA	142403168	142270474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_142271692_142274780_142274864_142284412_142284486_142300485_142300648_142314383_142314441_142315002_142315090_142318543_142318635_142330900_142330971_142331753_142331832_142354636_142354764_142403103
transcript_92218.known	chr8	-	2823	4	FSM	ENSG00000234616.9	ENST00000615982.4	2823	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.89897948556636	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGCCTCAGGTGTTA	-1	True	NA	NA	False	AATAAA	-18	NA	142669970	142657462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_142658081_142658821_142658945_142664477_142666521_142669931
transcript_92219.known	chr8	+	735	3	FSM	ENSG00000167653.5	ENST00000510969.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCCAGGACTCCC	20	False	NA	NA	False	NA	NA	NA	142670320	142682299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_142670569_142681326_142681435_142681920
transcript_9222.known	chr1	-	7635	9	FSM	ENSG00000143858.12	ENST00000367268.5	7635	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	8.03118920210451	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGGTGGGGGGTGTCT	5	True	NA	NA	False	ATTAAA	-19	NA	202710454	202590595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603119_202604454_202604622_202605594_202605790_202710257
transcript_92221.known	chr8	-	592	3	FSM	ENSG00000197353.4	ENST00000359228.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	11	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTCCTGTGTGTCTGT	-11	True	NA	61	True	NA	NA	NA	142752532	142750149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_142750483_142751050_142751171_142752393
transcript_92222.known	chr8	+	740	5	FSM	ENSG00000160932.11	ENST00000521003.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1835.62964333767	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGGTCAGGCCCACCC	12	True	NA	NA	False	NA	NA	NA	143018528	143021902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020261_143020378_143020882_143020992_143021313_143021434_143021565
transcript_92223.known	chr8	+	1256	5	FSM	ENSG00000160932.11	ENST00000521699.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1835.62964333767	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTCTGAGTGTGGCT	0	True	NA	16	True	AATAAA	-18	NA	143018516	143022411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021565
transcript_92224.known	chr8	+	1419	5	FSM	ENSG00000160932.11	ENST00000520466.5	1419	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1794.64961761342	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	11	True	NA	14	True	AATAAA	-16	NA	143018527	143022409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143018832_143019120_143020882_143020992_143021313_143021434_143021565
transcript_92225.known	chr8	+	868	5	FSM	ENSG00000160932.11	ENST00000522024.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1783.92110251547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCTTGGTCCCAGGTC	40	False	NA	NA	False	NA	NA	NA	143018556	143021892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143018832_143019120_143020887_143020992_143021313_143021434_143021565
transcript_92228.known	chr8	+	971	4	FSM	ENSG00000160932.11	ENST00000519546.5	971	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	1582.55686223978	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCACTTCAAGGGCAG	35	False	NA	NA	False	NA	NA	NA	143018551	143022255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021548
transcript_92229.known	chr8	+	1131	4	FSM	ENSG00000160932.11	ENST00000292494.11	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	2665	junction_1	504.448874185151	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	12	True	NA	14	True	AATAAA	-16	NA	143018528	143022409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021565
transcript_92230.known	chr8	+	427	4	FSM	ENSG00000160932.11	ENST00000523847.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1600.09090019564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTTGCGCTTCCATCT	36	False	NA	9	True	NA	NA	NA	143018552	143023832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143023668
transcript_92231.known	chr8	+	1079	4	FSM	ENSG00000160932.11	ENST00000521182.5	1079	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	1480.84998114821	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	29	False	NA	14	True	AATAAA	-16	NA	143018545	143022409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020882_143020992_143021348_143021434_143021565
transcript_92232.known	chr8	+	857	4	FSM	ENSG00000160932.11	ENST00000522971.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1744.05013944235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGGGGAGGGAGGT	25	False	NA	NA	False	NA	NA	NA	143018541	143022182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020916_143020992_143021313_143021434_143021565
transcript_92236.known	chr8	+	490	3	FSM	ENSG00000160932.11	ENST00000520531.5	490	3	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_1	1321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGGCTTCCATGGGC	11	True	NA	NA	False	NA	NA	NA	143018527	143021640	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143018587_143020887_143020992_143021313
transcript_92240.nic	chr8	+	1270	6	FSM	ENSG00000177335.12	ENST00000523099.6	1255	6	-15	0	10	0	multi-exon	FALSE	canonical	2	10	junction_1	13.6088206689632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTCCATGACTACCA	-1	True	NA	19	True	ATTAAA	-16	NA	143039218	143053444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143039570_143042957_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_92243.known	chr8	+	1554	6	FSM	ENSG00000177335.12	ENST00000517653.5	1554	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.2567051239665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTCATGGGAAGCCTT	0	True	NA	NA	False	NA	NA	NA	143039208	143053938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143039570_143043177_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_92244.nnic	chr8	+	947	5	NIC	ENSG00000177335.12	novel	1255	6	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	17.5837282736057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTCCATGACTACCA	-24	True	NA	19	True	ATTAAA	-16	NA	143039236	143053444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_143039570_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_92247.known	chr8	+	1300	4	FSM	ENSG00000261667.2	ENST00000562505.2	1300	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTCATTCCTTCCTTC	18	True	NA	NA	False	AATAAA	-15	NA	143080629	143083486	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143080660_143081035_143081127_143081210_143081328_143082424
transcript_92248.known	chr8	-	660	3	FSM	ENSG00000253716.7	ENST00000517411.3	684	3	21	3	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	30.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-7	True	NA	-6	True	AATAAA	-20	NA	143281670	143280160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143280516_143280881_143280998_143281481
transcript_92249.known	chr8	-	379	2	FSM	ENSG00000253716.7	ENST00000518073.2	1048	2	2	667	1	0	multi-exon	FALSE	canonical	3	67	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-27	True	NA	-14	True	ATTAAA	-16	NA	143281690	143280827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143280998_143281481
transcript_92250.known	chr8	-	1527	1	FSM	ENSG00000253716.7	ENST00000671046.1	1527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-24	True	NA	-6	True	AATAAA	-20	NA	143281687	143280160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143280200_143281700
transcript_92251.known	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_9	23.4008041130234	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-11	True	NA	5	True	AATAAA	-34	NA	143334880	143309323	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
transcript_92252.known	chr8	-	1918	1	FSM	ENSG00000254389.3	ENST00000518049.1	1918	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGATGGAGTCTTG	78	False	NA	-7	True	NA	NA	NA	143368548	143366630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143366600_143368500
transcript_92253.known	chr8	+	1778	7	FSM	ENSG00000158106.14	ENST00000522899.1	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	29.5503337074596	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	NA	False	NA	-7	True	NA	NA	NA	143379336	143382779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143379509_143379828_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_92254.known	chr8	-	3270	12	FSM	ENSG00000014164.7	ENST00000262577.6	3270	12	0	0	0	0	multi-exon	TRUE	canonical	3	249	junction_10	27.9970482505532	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCTTGTCCTGACT	3	True	NA	-5	True	AATAAA	-15	NA	143541447	143437658	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143438088_143440040_143440364_143440935_143441121_143465716_143465849_143468208_143468279_143468381_143468541_143468616_143468660_143475397_143475586_143507745_143507900_143536256_143536454_143538002_143539321_143541375
transcript_92255.known	chr8	+	2496	14	FSM	ENSG00000104518.11	ENST00000526406.5	2496	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.1803472093883	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	NA	False	NA	13	True	AATAAA	-19	NA	143553206	143563062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143553761_143555058_143555197_143555933_143556031_143558361_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_92259.known	chr8	+	1723	11	FSM	ENSG00000104518.11	ENST00000262580.9	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	27.7937043231017	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	-17	True	NA	13	True	AATAAA	-19	NA	143558345	143563062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_9226.known	chr1	+	634	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	69	2	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	25	True	NA	23	True	NA	NA	NA	202810961	202811913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202811371_202811688
transcript_92268.known	chr8	-	1118	9	FSM	ENSG00000104529.19	ENST00000534380.6	1118	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1407.62951779756	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	313	False	NA	-42	True	ATTAAA	-6	NA	143597362	143579735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143593874_143594072_143597347
transcript_9227.known	chr1	+	748	2	FSM	ENSG00000228288.8	ENST00000417262.5	748	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	25	True	NA	23	True	NA	NA	NA	202810961	202811913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_202811371_202811574
transcript_92275.known	chr8	-	861	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1112.17874059002	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	288	False	NA	-35	True	ATTAAA	-13	NA	143597387	143579728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
transcript_92279.known	chr8	-	1458	8	FSM	ENSG00000104529.19	ENST00000317198.10	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	1129.84331584842	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGGCCTGTCTCCCTC	287	False	NA	-3	True	ATTAAA	-45	NA	143597388	143579696	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143596878
transcript_92280.known	chr8	-	1311	8	FSM	ENSG00000104529.19	ENST00000529272.5	1311	8	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_7	983.603869161042	2498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597744	143579727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143597347
transcript_92287.known	chr8	-	899	8	FSM	ENSG00000104529.19	ENST00000529516.6	899	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1311.40899456287	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	278	False	NA	-42	True	ATTAAA	-6	NA	143597397	143579735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586850_143597347
transcript_9229.nnic	chr1	-	1895	4	NNC	ENSG00000214796.9	novel	1982	3	NA	NA	22	1738	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	72.0061725749181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAACGGATCTGGATCTG	154	False	NA	-9	True	AATAAA	-35	NA	202861598	202850089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_202850200_202851867_202853281_202858881_202859103_202861447
transcript_92293.known	chr8	-	886	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_6	1362.60799775855	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	276	False	NA	-42	True	ATTAAA	-6	NA	143597399	143579735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
transcript_92297.known	chr8	-	840	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1412.9110218112	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	275	False	NA	-35	True	ATTAAA	-13	NA	143597400	143579728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
transcript_9230.nnic	chr1	-	1859	4	NNC	ENSG00000214796.9	novel	1982	3	NA	NA	58	1738	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.9843289100801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAACGGATCTGGATCTG	190	False	NA	-9	True	AATAAA	-35	NA	202861562	202850089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_202850206_202851873_202853281_202858881_202859103_202861447
transcript_92306.known	chr8	-	2678	6	FSM	ENSG00000104524.14	ENST00000220966.10	2678	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	12.6237870704476	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGTC	8434	False	NA	NA	False	NA	NA	NA	143609614	143603912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143605883_143606061_143606155_143606466_143606680_143606952_143607133_143608061_143608127_143609457
transcript_9231.nnic	chr1	-	1304	4	NIC	ENSG00000214796.9	novel	1112	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	76.7506786072063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAACTCTGTGGAATTC	-1	True	NA	-5	True	AATACA	-18	NA	202861618	202852886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_202853281_202857646_202858165_202858881_202859103_202861447
transcript_92316.known	chr8	-	533	3	FSM	ENSG00000104529.19	ENST00000530109.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	3516	junction_1	18	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	9203	False	NA	-34	True	ATTAAA	-14	NA	143580740	143579727	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505
transcript_92317.known	chr8	-	1621	7	FSM	ENSG00000104529.19	ENST00000530445.6	1621	7	0	0	0	0	multi-exon	FALSE	canonical	3	2617	junction_5	377.620032425306	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	9875	False	NA	-42	True	ATTAAA	-6	NA	143587564	143579735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728
transcript_92322.known	chr8	-	1324	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	218.131244896278	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-10	True	NA	-5	True	AATAAA	-17	NA	143617482	143612617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
transcript_92323.known	chr8	-	1345	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	80.4537755484477	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-17	True	NA	-5	True	AATAAA	-17	NA	143617549	143612617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_92328.nic	chr8	-	1522	10	NIC	ENSG00000104522.16	novel	1345	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	559	junction_9	84.7977987135672	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-24	True	NA	-5	True	AATAAA	-17	NA	143617556	143612617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_9234.known	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	93	junction_1	49	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	9	True	NA	NA	False	NA	NA	NA	202861608	202851827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202853281_202858881_202859103_202861447
transcript_92340.known	chr8	-	2220	9	FSM	ENSG00000104522.16	ENST00000531473.5	2220	9	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	34.6482322781408	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	28	True	NA	-5	True	AATAAA	-17	NA	143617504	143612617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566
transcript_92341.known	chr8	+	3960	2	FSM	ENSG00000183309.12	ENST00000526926.6	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTCAGTAGTTC	-19	True	NA	NA	False	NA	NA	NA	143636018	143653730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143636146_143649897
transcript_92342.known	chr8	+	567	5	FSM	ENSG00000181135.16	ENST00000534303.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.73205080756888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGCCCACGGCTTTCC	-18	True	NA	NA	False	NA	NA	NA	143684452	143693839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_92343.known	chr8	+	2114	5	FSM	ENSG00000181135.16	ENST00000533031.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.9474565306379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCGTGTTTCAGGTT	-15	True	NA	-19	True	NA	NA	NA	143684455	143695356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143684543_143690056_143690124_143691072_143691233_143691599_143691714_143693670
transcript_92344.nnic	chr8	+	1931	14	NNC	ENSG00000181085.15	novel	1871	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	8.47132301411459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	-9	True	NA	13	True	AATAAA	-18	NA	143716345	143722458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_143716444_143717693_143717793_143717989_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720288_143720702_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_92345.known	chr8	+	1871	14	FSM	ENSG00000181085.15	ENST00000338033.9	1871	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	7.72607971045521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	-6	True	NA	13	True	AATAAA	-18	NA	143716348	143722458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720288_143720702_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_9235.known	chr1	-	631	3	FSM	ENSG00000214796.9	ENST00000430114.2	1112	3	0	481	0	-481	multi-exon	FALSE	canonical	3	97	junction_1	47	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGCCGTGCATCATC	-3	True	NA	NA	False	AAAAAG	-14	NA	202861620	202857927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202858165_202858881_202859103_202861447
transcript_92357.known	chr8	-	1842	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_11	597.939492226125	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	3	True	NA	-31	True	GATAAA	-25	NA	143829026	143816376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_92358.known	chr8	-	1868	12	FSM	ENSG00000179950.14	ENST00000526683.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_7	445.979060398635	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCGTGTGTCCTTAG	11	True	NA	2	True	NA	NA	NA	143829315	143816343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_92362.known	chr8	-	1736	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_10	599.854282305295	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	7074	False	NA	-31	True	GATAAA	-25	NA	143829303	143816376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
transcript_92364.known	chr8	-	1804	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	566.651074295285	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-10	True	NA	-31	True	GATAAA	-25	NA	143829039	143816376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_92365.known	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_7	360.966258810986	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	7025	False	NA	-31	True	GATAAA	-25	NA	143829352	143816376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_92369.known	chr8	-	1559	10	FSM	ENSG00000179950.14	ENST00000527197.5	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_9	565.690138974804	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCCCTCTCCCCGGA	6	True	NA	-40	True	NA	NA	NA	143829320	143816519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143829279
transcript_92379.known	chr8	-	604	5	FSM	ENSG00000179950.14	ENST00000532127.5	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	432.043617589706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGAGGGCAGCCGGCCAG	7	True	NA	NA	False	NA	NA	NA	143829319	143820425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_92380.known	chr8	+	2674	2	FSM	ENSG00000287222.1	ENST00000654408.1	2674	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATACTTTTGTCTCTGTG	436	False	NA	NA	False	NA	NA	NA	143829517	143832861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143830039_143830708
transcript_92381.known	chr8	+	1858	7	FSM	ENSG00000178719.17	ENST00000395068.9	1858	7	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_2	46.1642598650611	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	0	True	NA	23	True	AATAAA	-18	NA	143990055	143993415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_143990200_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_92386.known	chr8	+	842	3	FSM	ENSG00000178896.9	ENST00000316052.6	842	3	0	0	0	0	multi-exon	FALSE	canonical	1	159	junction_1	148.5	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCACTGTACGTTATCA	-14	True	NA	13	True	AATAAA	-20	NA	144078671	144080648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144078900_144079942_144080150_144080241
transcript_92387.known	chr8	-	1264	1	FSM	ENSG00000255224.1	ENST00000524499.1	1264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGCAATCTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	144079265	144078001	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144078000_144079300
transcript_92389.known	chr8	+	2054	12	FSM	ENSG00000197858.11	ENST00000355091.9	2054	12	0	0	0	0	multi-exon	FALSE	canonical	2	380	junction_8	87.8494203803134	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	-5	True	NA	27	True	AATAAA	-23	NA	144082633	144086216	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144082805_144083123_144083304_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_92390.known	chr8	+	1832	6	FSM	ENSG00000179091.5	ENST00000533444.1	1832	6	0	0	0	0	multi-exon	FALSE	canonical	3	3227	junction_2	153.909843739769	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	-4	True	NA	18	True	AATAAA	-18	NA	144095038	144097525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_92393.nic	chr8	-	1407	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	188.599401841575	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-7	True	NA	-6	True	ATTAAA	-16	NA	144104126	144098636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103846
transcript_92394.nic	chr8	-	1353	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	186.766189057334	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-22	True	NA	-6	True	ATTAAA	-16	NA	144104250	144098636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_924.nic	chr1	-	1966	10	ISM	ENSG00000142632.17	ENST00000270747.8	3322	16	6101	250	-8	-250	3prime_fragment	FALSE	canonical	3	177	junction_9	34.5728788303387	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	6088	False	NA	-7	True	AATAAA	-17	NA	16206551	16198103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179
transcript_9240.nnic	chr1	+	1472	2	NIC	ENSG00000234996.4	novel	2321	3	NA	NA	-26	120	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGTCCTTGAAGCTTG	NA	False	NA	7	True	AATAAA	-21	NA	202861727	202874446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_202861810_202873056
transcript_92400.known	chr8	+	1712	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	25.4353823970852	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	-1	True	NA	7	True	AATAAA	-17	NA	144148035	144213467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_92402.known	chr8	-	3653	17	FSM	ENSG00000185000.12	ENST00000528718.6	3653	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	12.0208152801713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGGTCAGTCCAGGT	-1	True	NA	-11	True	AATACA	-18	NA	144326852	144314583	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144316710_144316852_144316916_144317021_144317110_144317186_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698_144318752_144318834_144318921_144319027_144319069_144321320_144321409_144326436
transcript_92403.known	chr8	-	1336	12	FSM	ENSG00000185000.12	ENST00000524965.5	1336	12	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	12.9180506678775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGTCAATAAAGTGCT	8221	False	NA	-43	True	NA	NA	NA	144318724	144316319	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144316710_144316852_144316916_144317021_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698
transcript_92406.known	chr8	+	1757	5	FSM	ENSG00000185803.12	ENST00000530047.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	203.418749135865	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGCATTAATTCT	3907	False	NA	26	True	AATAAA	-13	NA	144358556	144361270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144358611_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_92407.known	chr8	+	1696	5	FSM	ENSG00000185803.12	ENST00000674870.1	1696	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.793929423734	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	6	False	NA	28	True	AATAAA	-15	NA	144358569	144361272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144358611_144359233_144359424_144359622_144360494_144360589_144360714_144360802
transcript_92408.known	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	30.8747469625259	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	13	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_9241.known	chr1	-	3119	2	FSM	ENSG00000183155.5	ENST00000367262.4	3119	2	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAGTAGGGGATGGGG	2932	False	202889166	NA	False	NA	NA	NA	202889149	202878281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202881224_202888972
transcript_92412.known	chr8	+	1960	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	13.9855975480317	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-9	True	NA	NA	False	NA	NA	NA	144374046	144393242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_92415.known	chr8	+	2027	14	FSM	ENSG00000173137.12	ENST00000529654.5	2027	14	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	18.6068003093353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-10	True	NA	NA	False	NA	NA	NA	144374045	144393242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390860_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_92416.known	chr8	-	4480	38	FSM	ENSG00000071894.17	ENST00000616140.2	4480	38	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_37	85.7316809021	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTGTGTGGTCATTAC	-24	True	NA	-4	True	AAAACA	-25	NA	144409335	144393230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014_144409173_144409288
transcript_92417.known	chr8	-	2123	12	FSM	ENSG00000147804.10	ENST00000301305.8	2123	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	7.45897872609673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	0	True	NA	-1	True	AGTAAA	-19	NA	144416844	144412413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512_144413568_144413749_144413882_144413957_144414096_144414261_144414435_144414724_144414897_144414973_144415111_144415226_144415420_144415809_144416092_144416597
transcript_92418.known	chr8	-	668	4	FSM	ENSG00000147804.10	ENST00000532718.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	4	True	NA	-1	True	AGTAAA	-19	NA	144413586	144412413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512
transcript_92423.known	chr8	-	650	10	FSM	ENSG00000160948.14	ENST00000533806.5	650	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	115.611524907156	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTCGACCTGGAG	-20	True	NA	NA	False	NA	NA	NA	144428548	144423863	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_92429.known	chr8	-	948	10	FSM	ENSG00000160948.14	ENST00000292510.6	948	10	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_9	55.8518764122158	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-20	True	NA	-25	True	AATAAA	-18	NA	144428548	144423616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_92440.known	chr8	-	573	9	FSM	ENSG00000160948.14	ENST00000531032.5	573	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	58.6024743504914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGCACCGCATGAGC	-15	True	NA	NA	False	NA	NA	NA	144428543	144424104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_92452.known	chr8	-	892	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	18.7078693335184	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-9	True	NA	-25	True	AATAAA	-18	NA	144426983	144423616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_92456.nnic	chr8	-	1724	3	NNC	ENSG00000187954.13	novel	907	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	119.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	-4	True	NA	0	True	AATAAA	-24	NA	144462867	144451119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_144452571_144453221_144453461_144462833
transcript_92457.known	chr8	-	1216	3	FSM	ENSG00000187954.13	ENST00000306145.10	1216	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	19	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAAACTGCCCATTTTT	-67	True	NA	-14	True	AATAAA	-21	NA	144465492	144463824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144464613_144464808_144465097_144465352
transcript_92458.known	chr8	-	581	3	FSM	ENSG00000187954.13	ENST00000530637.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	53.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGCTGCCACCACCA	17	True	NA	NA	False	GGGGCT	-21	NA	144465667	144464577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144464613_144464808_144465097_144465409
transcript_92459.known	chr8	-	1162	3	FSM	ENSG00000187954.13	ENST00000424149.6	1162	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	62.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	10004	False	NA	-6	True	AATAAA	-29	NA	144465648	144463816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144464613_144464808_144465097_144465570
transcript_9246.known	chr1	-	3311	12	FSM	ENSG00000117153.16	ENST00000367261.8	3311	12	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	22.5480203818538	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAGAGTTTGTGGCTAA	-4	True	NA	-24	True	ATTAAA	-17	NA	202927234	202891119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_92460.known	chr8	-	492	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	433.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCCAGTCCCCCGCCA	10	True	NA	NA	False	NA	NA	NA	144475823	144474872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144475057_144475156_144475224_144475582
transcript_92461.known	chr8	-	2017	3	FSM	ENSG00000160973.8	ENST00000377317.5	2017	3	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	87.5	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCAGGGCCGCGACCCAG	-16	True	NA	NA	False	NA	NA	NA	144475849	144473411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144475057_144475156_144475262_144475582
transcript_92464.known	chr8	+	807	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	4630	False	NA	11	True	GATAAA	-18	NA	144501088	144502120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144501295_144501519
transcript_92466.known	chr8	+	5337	4	FSM	ENSG00000160959.8	ENST00000292524.6	5337	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	56.1505911713215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	-5	True	NA	35	True	AATAAA	-23	NA	144517991	144525172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910
transcript_92467.nic	chr8	+	2114	4	NIC	ENSG00000160959.8	novel	2243	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	57.092517509351	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGCTGTTTTTTTTTC	-16	True	NA	33	True	NA	NA	NA	144517980	144522024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910
transcript_92469.known	chr8	-	2953	5	FSM	ENSG00000198169.9	ENST00000292562.12	2953	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	26.6176633084123	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTTGGGCTTTGACA	-51	True	NA	-6	True	AATAAA	-20	NA	144755531	144720908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_92475.nnic	chr8	-	764	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-67	1543	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	34.1421660121323	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAATTCCATCCTTCT	-1	True	NA	NA	False	AATATA	-17	NA	144755598	144751910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_-_144752129_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_92477.known	chr8	-	2808	6	FSM	ENSG00000196378.13	ENST00000429371.7	2808	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	16.2406896405294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTCTTTCTATGTC	-17	True	NA	2	True	CATAAA	-20	NA	144787317	144772223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780227_144780281_144787278
transcript_92479.known	chr8	-	1901	6	FSM	ENSG00000196378.13	ENST00000343459.8	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	25.4982352330509	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCATGTTCATTTTAG	-4	True	NA	0	True	ATTAAA	-25	NA	144787304	144773113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_92491.known	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_5	10634.3584592584	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	15	True	NA	-18	True	AATAAA	-17	NA	144792389	144789768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
transcript_92493.known	chr8	-	1041	6	FSM	ENSG00000161016.18	ENST00000262584.7	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	7798	junction_5	8905.32245345445	8370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGTGCCCACCCCC	953	False	NA	-19	True	AATAAA	-16	NA	144792587	144789769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792365
transcript_92502.known	chr8	-	556	4	FSM	ENSG00000161016.18	ENST00000529163.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	1	94	junction_3	14144.44082395	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCCACCCCCATG	14	True	NA	-16	True	AATAAA	-19	NA	144792390	144789766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144792365
transcript_92505.known	chr8	-	698	5	FSM	ENSG00000161016.18	ENST00000531975.5	698	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	12284.5377482224	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCCACCCCCATGG	1483	False	NA	-15	True	AATAAA	-20	NA	144792057	144789765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791873_144791991
transcript_92506.known	chr8	-	717	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	14646	junction_2	9163.97297391621	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGCCCACCCCCAT	1581	False	NA	-17	True	AATAAA	-18	NA	144791959	144789767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
transcript_92507.known	chr8	+	546	5	FSM	ENSG00000147789.16	ENST00000529767.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.6427005009183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAAAGTGACAGGCTT	15	True	NA	NA	False	NA	NA	NA	144827576	144841524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144829426_144829605_144837390_144837508_144841354
transcript_92508.known	chr8	+	2794	5	FSM	ENSG00000147789.16	ENST00000446747.7	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	32.7900518450337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	-3	True	NA	105	True	NA	NA	NA	144827558	144843772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144829444_144829605_144837390_144837508_144841354
transcript_92510.known	chr8	+	2738	5	FSM	ENSG00000147789.16	ENST00000527218.6	2738	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	35.038371822903	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	17	True	NA	105	True	NA	NA	NA	144827578	144843772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837393_144837508_144841354
transcript_92513.known	chr8	+	2125	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	38.0555150040335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	NA	False	NA	23	True	AATAAA	-19	NA	144827517	144843222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
transcript_92514.nnic	chr8	+	2234	4	NNC	ENSG00000147789.16	novel	2125	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.339894504671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	-17	True	NA	23	True	AATAAA	-19	NA	144827544	144843222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr8_+_144827610_144829042_144829227_144837390_144837508_144841354
transcript_92515.known	chr8	+	855	4	FSM	ENSG00000147789.16	ENST00000532382.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	18.263503375737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGATTCTGAGG	-7	True	NA	NA	False	NA	NA	NA	144827554	144841475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144829042_144829605_144837390_144837508_144841354
transcript_92516.known	chr8	+	569	3	FSM	ENSG00000147789.16	ENST00000532393.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	48	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAATGCCAAAAAAAGTT	21	True	NA	NA	False	AATACA	-19	NA	144827582	144841782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_144827610_144837393_144837508_144841354
transcript_9252.nnic	chr1	-	2042	8	NNC	ENSG00000159346.13	novel	2091	8	NA	NA	277	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	394.965614623215	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-4	True	NA	-8	True	AATAAA	-31	NA	202957987	202940831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202957908
transcript_92520.known	chr8	-	1430	2	FSM	ENSG00000170619.10	ENST00000305103.4	1430	2	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCATCAGAGGATGGCG	-12	True	NA	-13	True	AATAAA	-20	NA	144853048	144850175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144852838
transcript_92521.known	chr8	-	849	2	FSM	ENSG00000170619.10	ENST00000529143.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCGAGCGTCCTGATG	897	False	NA	NA	False	NA	NA	NA	144852657	144850824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144852379
transcript_92523.known	chr8	-	1305	2	FSM	ENSG00000170619.10	ENST00000402718.4	1305	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCGTGTGATGCAG	-31	True	NA	-3	True	AATAAA	-30	NA	144853067	144850165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144852992
transcript_92524.known	chr8	-	1573	2	FSM	ENSG00000170619.10	ENST00000450361.2	1573	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACTGGAATAGCTCAT	NA	False	NA	-25	True	AATAAA	-8	NA	144853736	144850187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144851396_144853371
transcript_92525.known	chr8	-	6337	6	FSM	ENSG00000196150.14	ENST00000417550.7	6337	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	15.3022874107109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTGCAGTGAAGAA	-6	True	NA	NA	False	AATAAA	-17	NA	144901453	144876954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_92526.known	chr8	-	672	6	FSM	ENSG00000196150.14	ENST00000533622.5	672	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	26.4302856586909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCATGCCACTCACTCC	21	True	NA	NA	False	NA	NA	NA	144901426	144882654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901336
transcript_92528.known	chr8	-	6364	6	FSM	ENSG00000196150.14	ENST00000292579.11	6364	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	21.844907873461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGCAGTGAAGAAAGAT	-14	True	NA	NA	False	AATAAA	-21	NA	144901461	144876950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890075_144890307_144890404_144901398
transcript_9253.known	chr1	-	2091	8	FSM	ENSG00000159346.13	ENST00000340990.10	2091	8	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_3	49.5864530545452	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-22	True	NA	-8	True	AATAAA	-31	NA	202958312	202940831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202958184
transcript_92530.known	chr8	-	593	5	FSM	ENSG00000196150.14	ENST00000533221.5	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	27.5352047386614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATGTGTGTTGAGTGT	24	True	NA	NA	False	NA	NA	NA	144901423	144882605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144882837_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_92532.nic	chr8	-	723	5	ISM	ENSG00000196150.14	ENST00000417550.7	6337	6	-22	9639	4	3093	5prime_fragment	FALSE	canonical	3	52	junction_4	11.4127122105133	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-28	True	NA	-2	True	ATTAAA	-18	NA	144901475	144886593	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr8_-_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_92537.known	chr8	-	696	3	FSM	ENSG00000170631.15	ENST00000532351.5	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTATTCAGCGTCAA	30	True	NA	NA	False	NA	NA	NA	144950819	144932122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144932591_144946010_144946216_144950796
transcript_92538.known	chr8	-	568	3	FSM	ENSG00000170631.15	ENST00000527512.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTCTCCCAGGAGGGG	-26	True	NA	NA	False	NA	NA	NA	144950875	144932404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144932591_144945912_144946216_144950796
transcript_92539.known	chr8	-	2206	2	FSM	ENSG00000170631.15	ENST00000527427.1	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAGAAAAA	-26	True	NA	NA	False	NA	NA	NA	144950875	144944088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144946216_144950796
transcript_92542.known	chr8	-	1112	3	FSM	ENSG00000196922.11	ENST00000534037.7	1136	3	20	4	6	-4	multi-exon	FALSE	canonical	3	18	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTTGGGTGTAGGT	-16	True	NA	NA	False	ATTAAA	-14	NA	145002875	144995721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144996608_144999602_144999770_145002816
transcript_92543.known	chr8	-	599	4	FSM	ENSG00000196922.11	ENST00000528392.6	1980	4	17	1364	0	-561	multi-exon	FALSE	canonical	2	9	junction_2	5.8878405775519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCTCTAGAGAGAATGG	1	True	NA	NA	False	NA	NA	NA	145002895	144978314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144978554_144994478_144994593_144999602_144999770_145002816
transcript_92544.known	chr8	-	575	4	FSM	ENSG00000196922.11	ENST00000529315.2	575	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.48528137423857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAGAAGATACATGCAA	15	False	NA	NA	False	TATAAA	-19	NA	145002881	144996451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_-_144996608_144999602_144999770_145000351_145000539_145002816
transcript_92546.known	chr8	+	2588	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	0	0	0	0	multi-exon	FALSE	canonical	1	228	junction_2	185.038509505454	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-3	True	NA	26	True	NA	NA	NA	145052466	145056030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
transcript_92548.known	chr8	+	2676	4	FSM	ENSG00000182307.14	ENST00000530455.5	2676	4	0	0	0	0	multi-exon	FALSE	canonical	1	228	junction_1	189.6915625137	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-3	True	NA	26	True	NA	NA	NA	145052466	145056030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr8_+_145052898_145053061_145053147_145053296_145053444_145054017
transcript_9255.known	chr1	-	1624	9	FSM	ENSG00000159348.13	ENST00000367249.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	9.48683298050514	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTGTCTGGGGTC	-11	True	NA	-4	True	AATAAA	-31	NA	202967257	202961872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527_202966601_202966748_202966899_202967190
transcript_92551.nnic	chr9	-	1725	10	NNC	ENSG00000181404.17	novel	1873	11	NA	NA	4732	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_4	72.9699752223517	61	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	NA	False	NA	40	True	AATAAA	-21	NA	25007	14474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_14941_15080_15150_15908_16062_16717_16877_16964_17167_17343_17480_17718_17856_18027_18175_18380_18480_24850
transcript_9256.known	chr1	-	863	8	FSM	ENSG00000159348.13	ENST00000482572.5	863	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	29.0116092174797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCGATTCACCTACTGA	3	True	NA	NA	False	NA	NA	NA	202967243	202962546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966748_202966899_202967190
transcript_92561.known	chr9	-	1771	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_15	489.133583208332	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	7	False	NA	NA	False	ATTAAA	-44	NA	179047	121059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_92565.known	chr9	-	1792	15	FSM	ENSG00000172785.18	ENST00000377400.8	1792	15	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_8	397.077152838239	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGATGTTGACGACC	NA	False	NA	NA	False	AATAAA	-17	NA	179147	121040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_92583.known	chr9	-	1241	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	516.201958092433	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	33	False	NA	-6	True	AATAAA	-20	NA	179021	121408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_92595.known	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	698.90978594443	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	31	False	NA	NA	False	ATTAAA	-39	NA	179023	171952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_173367_175697_175785_177722_177821_178815
transcript_92596.known	chr9	-	1731	3	FSM	ENSG00000172785.18	ENST00000382393.2	1731	3	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_2	77	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	9	False	NA	NA	False	ATTAAA	-39	NA	179045	171952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_173367_175697_175785_178815
transcript_92597.known	chr9	+	5070	12	FSM	ENSG00000107104.21	ENST00000382297.7	5070	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	28.0035416886407	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	-13	True	NA	15	True	AATAAA	-16	NA	504694	746103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_92607.nic	chr9	+	1931	7	ISM	ENSG00000080503.24	ENST00000635590.1	1843	9	2225	-3	65	0	3prime_fragment	FALSE	canonical	2	3	junction_1	29.3565249230142	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	812	False	NA	17	True	AATAAA	-18	NA	2160677	2193574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_2161036_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
transcript_92609.nic	chr9	+	1575	4	ISM	ENSG00000080503.24	ENST00000635273.1	672	6	582	-778	244	0	3prime_fragment	FALSE	canonical	3	41	junction_2	23.6971634495683	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	236	False	NA	17	True	AATAAA	-18	NA	2181814	2193574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_2182243_2186095_2186229_2191265_2191409_2192703
transcript_9262.known	chr1	+	3031	8	FSM	ENSG00000163444.12	ENST00000367242.4	3031	8	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_3	156.580291719942	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCAGCTCTGAGTT	-10	True	NA	13	True	AATAAA	-19	NA	203007373	203024848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203007575_203007773_203007864_203008642_203008811_203014888_203015049_203015959_203016141_203018480_203018562_203020792_203020949_203022854
transcript_92626.nic	chr9	-	813	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	25	junction_2	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	551	False	NA	0	True	AATAAA	-25	NA	2621428	2535651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
transcript_92635.known	chr9	-	2187	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_9	45.8259079651506	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCTGTCTCCTCTGTT	-7	True	NA	-20	True	TATAAA	-30	NA	2844095	2804151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_92641.nic	chr9	-	1775	16	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-14	6215	-14	-6200	5prime_fragment	FALSE	canonical	3	777	junction_7	48.1800327475559	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAAGAAAATGGGAGAG	-21	True	NA	NA	False	GATAAA	-3	NA	2844109	2810366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_92646.nic	chr9	-	1665	9	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-14	23889	-14	434	5prime_fragment	FALSE	canonical	3	779	junction_6	32.7910048641392	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGGATTGTAAGA	-21	True	NA	NA	False	AATAAA	-7	NA	2844109	2828040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_92649.nic	chr9	-	406	4	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-1	29975	-1	-5652	5prime_fragment	FALSE	canonical	3	779	junction_1	42.4578222082418	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAGAACTGAAGC	-8	True	NA	-96	True	NA	NA	NA	2844096	2834126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_2834167_2837179_2837402_2838425_2838518_2844044
transcript_9265.known	chr1	+	653	3	FSM	ENSG00000163485.17	ENST00000640524.1	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCCTGAAGACTCAGCC	-12	True	NA	NA	False	ACTAAA	-4	NA	203127707	203165089	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203127929_203128784_203129183_203165055
transcript_92655.known	chr9	-	3904	12	FSM	ENSG00000106686.17	ENST00000682582.1	3904	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.98758403626569	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCATCTGTCTTGCTTCA	-24	True	NA	NA	False	ATTAAA	-15	NA	4666480	4598315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_4600810_4604178_4604270_4605346_4605441_4617922_4618111_4618863_4618899_4622407_4622511_4625326_4625567_4629090_4629169_4635274_4635400_4656040_4656090_4661898_4662037_4666211
transcript_9266.known	chr1	+	3407	3	FSM	ENSG00000163485.17	ENST00000367236.8	3407	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	NA	False	NA	13	True	AATAAA	-16	NA	203127064	203167405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203127929_203128784_203129183_203165260
transcript_92660.known	chr9	-	235	2	FSM	ENSG00000273061.2	ENST00000609131.2	256	2	21	0	21	0	multi-exon	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-11	True	NA	-5	True	AATAAA	-15	NA	4679471	4676599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_4676750_4679386
transcript_92661.known	chr9	-	463	2	FSM	ENSG00000273061.2	ENST00000607997.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCATGTGTTTAGA	5547	False	NA	NA	False	AATAAA	-16	NA	4679502	4678818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_4679166_4679386
transcript_92663.known	chr9	+	3500	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	20.5216687647201	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	-18	True	NA	14	True	AATAAA	-18	NA	4679568	4708399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
transcript_92667.known	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	23.4200768572607	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-6	True	NA	-7	True	AATAAA	-21	NA	4741202	4709555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
transcript_9267.known	chr1	+	2729	2	FSM	ENSG00000159388.6	ENST00000290551.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGTGTAGAGAAGT	0	True	NA	15	True	AATAAA	-17	NA	203305518	203309602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203305749_203307103
transcript_92670.known	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_3	11.3185412045899	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	9	True	NA	20	True	ATTAAA	-17	NA	4792943	4861066	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_92673.known	chr9	+	1644	8	FSM	ENSG00000120158.12	ENST00000442869.5	1644	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	39.1907944209726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATGTGAGGGAT	3	True	NA	NA	False	NA	NA	NA	4792979	4860861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4793228_4823547_4823620_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_92677.known	chr9	+	7023	25	FSM	ENSG00000096968.14	ENST00000381652.4	7023	25	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_4	5.16649865318219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGTTGTGTTTAT	-16	True	NA	NA	False	AATAAA	-21	NA	4985271	5129948	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_4985631_4985939_4986023_5021962_5022214_5029782_5029907_5044402_5044521_5050685_5050832_5054562_5054885_5055668_5055789_5064882_5065041_5066677_5066790_5069021_5069209_5069924_5070053_5072491_5072627_5073697_5073786_5077452_5077581_5078305_5078445_5080228_5080381_5080532_5080684_5081724_5081862_5089673_5089864_5090445_5090571_5090738_5090912_5123003_5123122_5126332_5126447_5126683
transcript_9268.known	chr1	+	1275	3	FSM	ENSG00000159388.6	ENST00000475157.1	1275	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTACTTTAATAAAAAT	NA	False	NA	-18	True	NA	NA	NA	203305490	203309569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203305749_203307103_203307689_203309137
transcript_92680.nic	chr9	-	1901	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	183	-1178	183	1166	3prime_fragment	FALSE	canonical	3	61	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGTAGAATGATTTAT	467	False	NA	-8	True	AATAAA	-17	NA	5304249	5298697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_5300445_5304095
transcript_92683.nic	chr9	-	723	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	183	0	183	0	3prime_fragment	FALSE	canonical	3	61	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAAAAGCCTTTTT	467	False	NA	-38	True	ATTAAA	-11	NA	5304249	5299875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_5300445_5304095
transcript_92688.nic	chr9	-	1089	6	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	115.111076791072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-16	True	NA	-6	True	AATAAA	-20	NA	5437876	5357970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437631
transcript_92689.known	chr9	-	981	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	42.218479366268	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-4	True	NA	-6	True	AATAAA	-20	NA	5437925	5357970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
transcript_9269.known	chr1	-	2943	3	FSM	ENSG00000122176.12	ENST00000354955.5	2943	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAAGAGTGGAGTCATT	5	True	NA	-5	True	AATAAA	-18	NA	203351122	203340627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_203342495_203347291_203348278_203351032
transcript_92693.nnic	chr9	-	870	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_3	111.757270457004	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	647	False	5437921	-6	True	AATAAA	-20	NA	5437901	5357970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437788
transcript_92699.known	chr9	-	1000	2	FSM	ENSG00000137040.10	ENST00000485372.1	1000	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGGAATATACAGAACAA	8	True	NA	NA	False	NA	NA	NA	6015612	6013497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_6014357_6015471
transcript_92700.known	chr9	-	4600	1	FSM	ENSG00000137040.10	ENST00000259569.6	4600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	-4	True	NA	-7	True	AATAAA	-31	NA	6015624	6011024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_6011000_6015600
transcript_92701.known	chr9	+	466	1	FSM	ENSG00000206147.5	ENST00000332361.5	466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTAAACTGAGTCCAGCT	10	False	NA	-38	True	NA	NA	NA	6639138	6639604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6639100_6639600
transcript_92702.known	chr9	+	526	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	135	245	81	-245	multi-exon	FALSE	canonical	3	25	junction_2	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	55	False	NA	7	True	AATAAA	-16	NA	6645955	6670635	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6646086_6669543_6669729_6670424
transcript_92703.nic	chr9	+	1041	2	FSM	ENSG00000236924.2	ENST00000688297.1	1035	2	-10	4	-10	-4	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTATACTGTGTTTT	-21	True	NA	NA	False	AATACA	-19	NA	6645831	6670330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6646086_6669543
transcript_92706.known	chr9	+	4338	22	FSM	ENSG00000107077.19	ENST00000381309.8	4338	22	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	13.7147817370616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	13	True	NA	5	True	AATAAA	-18	NA	6757972	7175648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
transcript_92708.known	chr9	+	1406	4	FSM	ENSG00000107077.19	ENST00000401787.7	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	20.8219969156552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTATATTGTCCTTTT	9	True	NA	NA	False	ATTAAA	-18	NA	6757653	6815149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630
transcript_92711.known	chr9	-	2456	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCAAAGTGTGTTTGG	-2	True	NA	NA	False	AATAAA	-20	NA	7799778	7796499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_7798638_7799460
transcript_92712.nnic	chr9	+	1227	3	NNC	ENSG00000225706.2	novel	1959	2	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTTGTGAGGACTAC	-1	True	NA	21	True	AATAAA	-15	NA	8858123	8861726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_8858324_8859955_8860038_8860781
transcript_92713.known	chr9	+	1668	2	FSM	ENSG00000225706.2	ENST00000447950.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACAGGAGAATTGCTTG	5	True	NA	NA	False	NA	NA	NA	8858129	8862255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_8858324_8860781
transcript_92715.known	chr9	+	2683	2	FSM	ENSG00000153714.6	ENST00000319264.4	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCACTGATCTTTTC	-1	True	NA	NA	False	ATTAAA	-16	NA	12775019	12823060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_12776028_12821385
transcript_9272.known	chr1	+	5769	3	FSM	ENSG00000188783.6	ENST00000343110.3	5769	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCGCTTC	2	True	NA	13	True	AATAAA	-22	NA	203475805	203491352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203475939_203483168_203484158_203486705
transcript_92720.known	chr9	-	8198	9	FSM	ENSG00000147862.18	ENST00000380959.7	8198	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4.715334028465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	8400	False	NA	-1	True	AATAAA	-18	NA	14313985	14081847	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_14088327_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_92726.known	chr9	-	9121	10	FSM	ENSG00000175893.12	ENST00000380916.9	9121	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	23.1900361745681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTTTTTATCCTCTTA	-3	True	NA	0	True	AATAAA	-18	NA	14693432	14611070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
transcript_92732.nic	chr9	-	1130	7	ISM	ENSG00000175893.12	ENST00000380916.9	9121	10	86	47394	-81	18901	5prime_fragment	FALSE	canonical	3	48	junction_4	25.9143889674357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTTATATCCACTAA	-14	True	NA	NA	False	NA	NA	NA	14693346	14658464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
transcript_9274.known	chr1	+	1434	8	FSM	ENSG00000188770.10	ENST00000367222.7	1434	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.97948663722157	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGCCCACACAGAACG	11	True	NA	89	True	NA	NA	NA	203494152	203508949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203494218_203495964_203496237_203496976_203497116_203498680_203498840_203499648_203499852_203502913_203503010_203503549_203503746_203508645
transcript_92747.known	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_1	0	1375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	0	True	NA	9	True	NA	NA	NA	14722733	14719723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_14720387_14722165
transcript_9275.known	chr1	+	8918	22	FSM	ENSG00000058668.15	ENST00000367218.7	8918	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	17.8696464161591	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGCTGTCCTCAATGC	-4	True	NA	16	True	AATAAA	-18	NA	203626786	203744079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203627220_203682741_203683399_203698156_203698355_203699459_203699718_203700205_203700332_203700797_203700924_203702043_203702080_203703651_203703814_203707008_203707224_203707861_203708105_203709300_203709543_203710876_203711109_203711959_203712140_203713164_203713253_203714170_203714278_203720548_203720741_203721196_203721411_203722477_203722690_203723880_203723989_203727394_203727572_203733222_203733401_203739545
transcript_92750.nic	chr9	-	926	4	ISM	ENSG00000164946.20	ENST00000427623.5	1421	11	26959	-214	26959	0	3prime_fragment	FALSE	canonical	1	22	junction_1	6.59966329107444	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGGTTTGTTTATTCC	NA	False	NA	-47	True	AATAAA	-19	NA	14747202	14737151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_14737596_14740148_14740235_14746352_14746469_14746922
transcript_92753.nnic	chr9	-	810	3	NIC	ENSG00000164946.20	novel	2481	14	NA	NA	26959	0	combination_of_known_splicesites	FALSE	canonical	1	15	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGGTTTGTTTATTCC	NA	False	NA	-47	True	AATAAA	-19	NA	14747202	14737151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_14737596_14740148_14740235_14746922
transcript_92757.known	chr9	-	998	1	FSM	ENSG00000214110.3	ENST00000397561.3	998	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGATGTCATATCA	350	False	NA	NA	False	AAAAAG	-15	NA	14922334	14921336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_14921300_14922300
transcript_92759.known	chr9	-	10483	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	10.3765663971232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	NA	False	NA	-4	True	AATAAA	-16	NA	15307360	15163621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_92768.nic	chr9	-	520	5	ISM	ENSG00000155158.20	ENST00000505732.5	1881	15	131	24679	-20	2872	5prime_fragment	FALSE	canonical	3	61	junction_2	9.06917857360853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGACGAGTCATTAAATA	-6	True	NA	4	True	NA	NA	NA	15307229	15211265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_92770.known	chr9	+	2524	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	60.0255089807247	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	4	True	NA	7	True	TATAAA	-16	NA	15422868	15462460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
transcript_92774.known	chr9	+	5680	9	FSM	ENSG00000164975.16	ENST00000380821.8	3000	9	-172	-2508	-30	1674	multi-exon	TRUE	canonical	3	321	junction_4	17.5209695793355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	NA	False	NA	NA	False	AATAAA	-4	NA	15422703	15464134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718
transcript_92786.nic	chr9	+	1105	6	ISM	ENSG00000164989.17	ENST00000380701.8	6553	26	-89	379895	-89	30118	5prime_fragment	FALSE	canonical	3	7	junction_5	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGAGAATTACAATT	64	False	NA	NA	False	NA	NA	NA	15552953	15594142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_15553303_15563977_15564130_15571623_15571760_15578848_15579024_15591365_15591557_15594040
transcript_92788.known	chr9	-	12808	7	FSM	ENSG00000173068.18	ENST00000380672.9	12808	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	17.5023807904334	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTTACCTTTCTGAT	-1	True	NA	-1	True	ATTAAA	-18	NA	16870670	16409502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_16419650_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
transcript_92794.nic	chr9	+	521	2	NIC	ENSG00000234779.1	novel	428	3	NA	NA	-18	0	intron_retention	FALSE	canonical	3	25	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	NA	False	NA	4	True	AATAAA	-17	NA	16726795	16727524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_16727107_16727314
transcript_92798.known	chr9	+	4871	7	FSM	ENSG00000044459.15	ENST00000380641.4	4871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	27.9090785707208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTCATTATAGTGTA	-2	True	NA	23	True	AATAAA	-35	NA	17135039	17302051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
transcript_92800.nic	chr9	+	909	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-58	65487	0	-65487	5prime_fragment	FALSE	canonical	3	61	junction_3	10.5682306939241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCACTGATGCAAAAAT	NA	False	NA	NA	False	AAGAAA	-3	NA	17134981	17236564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_92801.nic	chr9	+	1178	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-58	65218	0	-65218	5prime_fragment	FALSE	canonical	3	61	junction_3	10.5682306939241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTTTTCAAATAA	NA	False	NA	NA	False	AATAAA	-19	NA	17134981	17236833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_92802.known	chr9	+	2272	3	FSM	ENSG00000044459.15	ENST00000484374.1	2272	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTCATGCTGATTCTG	NA	False	NA	NA	False	AATAAA	-8	NA	17134981	17168556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_17135426_17143287_17143377_17166817
transcript_92806.known	chr9	+	1864	13	FSM	ENSG00000178031.18	ENST00000327883.11	1864	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.68942791105944	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTCAAAGCTGATGA	NA	False	NA	NA	False	ATTAAA	-20	NA	18474099	18684957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029_18574267_18622242_18622370_18635942_18636018_18639253_18639412_18657638_18657751_18661934_18662074_18675856_18675908_18680311_18680517_18681811_18681960_18684715
transcript_92809.known	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	3	True	NA	15	True	AATAAA	-19	NA	19049426	19051025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_19049400_19051000
transcript_92811.known	chr9	-	6323	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_2	73.759083127097	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGGAATTTCCTATA	20	True	NA	-17	True	AATAAA	-15	NA	19102904	19053140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_92814.nic	chr9	-	1992	15	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-62	7035	-62	-1412	5prime_fragment	FALSE	canonical	3	254	junction_9	34.1748206629814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAATTAGAGGAACT	138	False	NA	NA	False	NA	NA	NA	19102966	19060175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_92817.nic	chr9	-	1790	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-62	10021	-62	-4398	5prime_fragment	FALSE	canonical	3	254	junction_8	24.9078776065707	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCAATTTCTAAGAAAA	138	False	NA	NA	False	AAGAAA	-5	NA	19102966	19063161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_92823.nic	chr9	-	1555	9	NIC	ENSG00000147872.10	novel	1897	8	NA	NA	-46	-163	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	99.0842444589451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGAAGAGTGTTAATC	NA	False	NA	NA	False	ATTAAA	-21	NA	19127538	19108537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_19108748_19116358_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_92825.known	chr9	-	1897	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	33.4352862608792	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTTGTTCCATATG	-3	True	NA	-15	True	AATAAA	-25	NA	19127492	19115760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_92829.nic	chr9	-	741	5	ISM	ENSG00000147872.10	ENST00000276914.7	1897	8	-50	5119	-50	220	5prime_fragment	FALSE	canonical	3	254	junction_1	30.5481177816245	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGGAATTTTATCTTG	NA	False	NA	0	True	NA	NA	NA	19127542	19120879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_92830.known	chr9	+	8143	33	FSM	ENSG00000137145.21	ENST00000434457.7	8143	33	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_19	17.1732611474204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTCTGCTGCTGCCAT	-3	True	NA	NA	False	ATTAAA	-31	NA	19230692	19374281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19336685_19336833_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
transcript_92831.known	chr9	+	6831	32	FSM	ENSG00000137145.21	ENST00000602925.5	6831	32	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_12	14.4834039726425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19230434	19372858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
transcript_92838.known	chr9	-	480	2	FSM	ENSG00000137154.13	ENST00000498815.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGACTTTTCATTG	3395	False	NA	-16	True	AATAAA	-17	NA	19376839	19376254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19376389_19376493
transcript_92839.known	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	2345.21006521804	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	0	True	NA	-31	True	AATAAA	-2	NA	19380206	19376269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
transcript_9284.known	chr1	+	5917	18	FSM	ENSG00000058673.17	ENST00000367210.3	5917	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	168.76578229415	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	-5	True	NA	17	True	AATAAA	-18	NA	203795622	203854124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203795795_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_92840.known	chr9	-	6724	11	FSM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	3.01496268633627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAATTGGATGTGATG	3	True	NA	NA	False	AATAAA	-23	NA	20622499	20341668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_92843.nic	chr9	-	1186	5	ISM	ENSG00000171843.17	ENST00000380338.9	6724	11	-51	72285	-51	-51249	5prime_fragment	FALSE	canonical	3	24	junction_2	1.80277563773199	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGAGTAGCTCAGAG	1126	False	NA	NA	False	AGTAAA	-44	NA	20622550	20413953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_92844.nic	chr9	-	954	5	ISM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	72466	0	-51430	5prime_fragment	FALSE	canonical	3	24	junction_2	1.80277563773199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAACCACTGAAAGA	3	True	NA	NA	False	AAGAAA	-7	NA	20622499	20414134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_92846.nnic	chr9	+	560	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	17	-96203	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAGTTGTAAAAGTTT	NA	False	NA	15	True	AATAAA	-26	NA	20658325	20673909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_20658460_20658690_20658827_20673619
transcript_92847.nnic	chr9	+	801	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	7	-96203	intron_retention	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAGTTGTAAAAGTTT	NA	False	NA	15	True	AATAAA	-26	NA	20658315	20673909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_20658827_20673619
transcript_92851.known	chr9	-	8277	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.72581562625261	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTCAGAAATGTGT	-6	True	NA	NA	False	AATAAA	-26	NA	21031640	20999508	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_92852.known	chr9	-	2557	4	FSM	ENSG00000171889.6	ENST00000654736.1	2557	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCCTTTACTGATT	4485	False	NA	NA	False	ATTAAA	-10	NA	21559900	21453801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559747
transcript_92858.known	chr9	+	6032	8	FSM	ENSG00000099810.21	ENST00000644715.2	6032	8	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	20.6150331514828	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTCTTATTTTTATTTT	-17	True	NA	5	True	ATTAAA	-17	NA	21802635	21867081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_9287.nic	chr1	+	1098	9	NIC	ENSG00000058673.17	novel	3451	20	NA	NA	6	280	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	157.206870078887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGGAAAAATCTAAGAAG	1	True	NA	28	True	AATAAA	-30	NA	203795628	203830176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_203795795_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122
transcript_92870.nic	chr9	+	2105	6	ISM	ENSG00000099810.21	ENST00000580718.1	1309	8	-67	6236	-41	-5961	5prime_fragment	TRUE	canonical	3	354	junction_5	20.9513722700925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTCATTTTAAGATAA	NA	False	NA	NA	False	AATAAA	-21	NA	21802594	21856131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630
transcript_92871.known	chr9	+	310	2	FSM	ENSG00000099810.21	ENST00000580675.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTTTGGCAGCC	-6	True	NA	NA	False	ATTAAA	-15	NA	21802646	21815607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432
transcript_92872.known	chr9	+	1309	8	FSM	ENSG00000099810.21	ENST00000580718.1	1309	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	132.763407793637	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTTTGGTTATTTA	9	True	NA	NA	False	AAGAAA	-1	NA	21802661	21862367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859285_21859426_21861975
transcript_92873.known	chr9	+	2241	8	FSM	ENSG00000099810.21	ENST00000419385.5	2241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	131.558476173378	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTATTGTTATTT	4	True	NA	28	True	AATAAA	-21	NA	21802656	21863286	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_21802782_21815432_21815545_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_92874.known	chr9	+	5586	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTATGCTACATT	0	True	NA	11	True	AATAAA	-14	NA	22446823	22455740	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_22447733_22451063
transcript_92876.known	chr9	-	3763	6	FSM	ENSG00000107105.15	ENST00000223951.10	3763	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	30.1688581156132	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	4884	False	NA	-1	True	AATAAA	-17	NA	23821480	23690103	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821226
transcript_92881.known	chr9	-	1532	6	FSM	ENSG00000120159.13	ENST00000625311.1	1532	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	122.470567892862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTTTTAACTATGTAG	-15	True	NA	NA	False	ATTAAA	-18	NA	26892442	26841735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892258
transcript_92882.known	chr9	-	2789	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_5	18.2909813842779	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	-7	True	NA	-2	True	ATTAAA	-18	NA	26892802	26840684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
transcript_9289.nic	chr1	+	1575	2	ISM	ENSG00000058673.17	ENST00000466470.5	944	3	-19	4466	12	919	5prime_fragment	FALSE	canonical	3	144	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAGAAGGGTTTGC	7	True	NA	NA	False	AATAAA	-24	NA	203795634	203797707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_203795795_203796292
transcript_92893.known	chr9	+	5325	20	FSM	ENSG00000096872.17	ENST00000380062.10	5325	20	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_8	17.9591719173151	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTATTTGTAATTTA	-13	True	NA	NA	False	ATTAAA	-27	NA	26956411	27066134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_92898.nic	chr9	+	2087	19	NIC	ENSG00000096872.17	novel	652	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	41.9235415170681	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	26976567	27062925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_26976783_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_92899.nic	chr9	+	1677	17	ISM	ENSG00000096872.17	ENST00000380062.10	5325	20	-63	10369	-1	-7119	5prime_fragment	FALSE	canonical	3	153	junction_8	17.0477271212323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAAATGTTAACC	1962	False	NA	NA	False	AAGAAA	-2	NA	26956348	27055765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608
transcript_92900.known	chr9	+	1462	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	49.9966862807252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCGTGTGATTTACCAAA	-7	True	NA	NA	False	AATAAA	-21	NA	26956478	27036800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
transcript_92903.nic	chr9	+	1177	13	ISM	ENSG00000096872.17	ENST00000429045.6	1462	14	-130	7760	-1	-7760	5prime_fragment	FALSE	canonical	3	153	junction_8	16.5923342407136	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGATAAATCAGTTTAT	1962	False	NA	NA	False	ATTAAA	-31	NA	26956348	27029040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024
transcript_92905.known	chr9	+	2163	20	FSM	ENSG00000096872.17	ENST00000443698.5	2163	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	43.6383398990071	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	25	False	NA	NA	False	AATAAA	-14	NA	26947311	27062925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_26947464_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_92906.known	chr9	-	4724	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	0	0	0	multi-exon	TRUE	canonical	3	303	junction_5	33.3408078404771	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATATACCCATTTCTT	5	True	NA	-5	True	AATAAA	-16	NA	26947242	26903371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_92907.nic	chr9	-	2931	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	-248	539	combination_of_known_junctions	FALSE	canonical	3	154	junction_4	67.715704726944	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGAGATTTTCCTGT	-1	True	NA	-10	True	AATAAA	-15	NA	26947490	26905343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_92909.known	chr9	-	2041	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	34.2818181483357	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	14	True	NA	-25	True	AATAAA	-23	NA	26947233	26907802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_9291.known	chr1	+	1560	5	FSM	ENSG00000182004.13	ENST00000414487.7	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	6006	junction_1	598.494935233374	3706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGTTTGAAATTAAT	5	True	NA	4	True	AATAAA	-22	NA	203861598	203871152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203861714_203862195_203862223_203863662_203863726_203865040_203865120_203869876
transcript_92910.nic	chr9	-	2072	12	NIC	ENSG00000137055.15	novel	2041	13	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	154	junction_3	70.6494079449729	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	6925	False	NA	-25	True	AATAAA	-23	NA	26947333	26907802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_92914.known	chr9	-	405	2	FSM	ENSG00000234676.1	ENST00000456198.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCCAATCTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	26956295	26955779	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_26956016_26956126
transcript_92916.known	chr9	+	4683	23	FSM	ENSG00000120156.22	ENST00000380036.10	4683	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	21.6367456039622	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGTGTGTCTCATAG	-1	True	NA	23	True	AATAAA	-23	NA	27109224	27230174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
transcript_92917.known	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	11.5181016954473	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-36	True	NA	-3	True	AATAAA	-17	NA	27529814	27325208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
transcript_92918.known	chr9	-	2678	12	FSM	ENSG00000147894.17	ENST00000644136.1	2678	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	69.7179678513532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTTTGTTTTCTTAAT	19	True	NA	NA	False	NA	NA	NA	27573457	27547107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27554592_27554626_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_92921.known	chr9	-	3231	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	22.8142499328819	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-5	True	NA	-3	True	AATAAA	-17	NA	27573481	27546545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_92922.known	chr9	-	3338	11	FSM	ENSG00000147894.17	ENST00000619707.5	3338	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	55.6704589526618	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	NA	False	NA	-3	True	AATAAA	-17	NA	27573866	27546545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573708
transcript_92925.nic	chr9	-	1570	5	ISM	ENSG00000147894.17	ENST00000644136.1	2678	12	-39	13682	-2	-289	5prime_fragment	FALSE	canonical	3	132	junction_4	26.5082534317144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTATTCACTTTTATGT	-20	True	NA	NA	False	AATAAA	-16	NA	27573496	27560789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_92926.known	chr9	+	7443	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_9	57.1742949235056	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	-23	True	NA	NA	False	ATTAAA	-16	NA	32384642	32454769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_9293.known	chr1	+	532	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	2992.05660875592	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	9	True	NA	28	True	AATAAA	-28	NA	203861602	203870084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
transcript_92930.known	chr9	-	4628	18	FSM	ENSG00000107201.11	ENST00000379883.3	4628	18	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_2	33.3228934054877	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	28	True	NA	NA	False	TATAAA	-4	NA	32526196	32455301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32526060
transcript_92931.known	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2366	junction_1	167.286181935827	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-9	True	NA	-7	True	AATAAA	-14	NA	32573159	32553000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
transcript_92934.known	chr9	-	4131	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	37	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTACATTGGTAGTT	18	True	NA	-8	True	AATAAA	-21	NA	32552586	32540543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32544327_32550773_32550969_32552433
transcript_92939.known	chr9	-	666	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	1313.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACGGTATGGAAAA	-9	True	NA	22	True	NA	NA	NA	32573159	32553650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32553945_32570959_32571053_32572880
transcript_92940.known	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	1129.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-3	True	NA	-19	True	AATAAA	-8	NA	32573184	32553532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32553945_32558909_32558955_32572880
transcript_92943.nic	chr9	+	401	2	FSM	ENSG00000235453.12	ENST00000692500.1	360	2	-41	0	-41	0	multi-exon	FALSE	canonical	3	473	junction_1	0	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTTTATTTTTGCATT	572	False	NA	17	True	AATAAA	-18	NA	32552285	32553007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_32552480_32552800
transcript_92945.known	chr9	-	2057	9	FSM	ENSG00000137074.20	ENST00000479656.6	2057	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	148.365627336658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTATTCAGTTG	-6	True	NA	-15	True	AATAAA	-8	NA	33001613	32972621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_32997242_32997349_33001566
transcript_92954.nic	chr9	-	1874	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	-37	86015	-4	0	5prime_fragment	FALSE	canonical	3	103	junction_5	117.763339293825	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-38	True	NA	-9	True	AATAAA	-14	NA	33001645	32972615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
transcript_92955.known	chr9	-	2101	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	145.693135719973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-13	True	NA	-30	True	AAAAAG	-32	NA	33025130	32972636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
transcript_92956.known	chr9	-	1814	8	FSM	ENSG00000137074.20	ENST00000485479.6	1814	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	164.429502293505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTTTTTCCCTGAGA	3	True	NA	-47	True	AAAAAG	-15	NA	33025065	32972653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988091_32988125_32989758_32989896_33024999
transcript_92958.known	chr9	-	1031	8	FSM	ENSG00000137074.20	ENST00000477119.2	1031	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	158.139824464404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTATTCTGGGTTGCTT	30	True	NA	-80	True	NA	NA	NA	33001577	32973444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987730_32988082_32988130_32989758_32989896_33001515
transcript_92962.known	chr9	-	2099	8	FSM	ENSG00000137074.20	ENST00000494649.5	2099	8	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_7	129.455847015616	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	86	False	NA	-9	True	AATAAA	-14	NA	33001521	32972615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001332
transcript_92964.nic	chr9	-	1989	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_6	103.004061738816	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-38	True	NA	-9	True	AATAAA	-14	NA	33001645	32972615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_92969.nic	chr9	-	1994	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_6	99.7464131624567	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-38	True	NA	-9	True	AATAAA	-14	NA	33001645	32972615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001566
transcript_92988.nic	chr9	-	1114	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	-37	86775	-4	0	5prime_fragment	FALSE	canonical	3	103	junction_5	117.763339293825	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-38	True	NA	-11	True	ATTAAA	-21	NA	33001645	32973375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
transcript_92997.nic	chr9	-	1229	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_6	103.004061738816	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-38	True	NA	-11	True	ATTAAA	-21	NA	33001645	32973375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_92999.nic	chr9	-	1324	8	NIC	ENSG00000137074.20	novel	2099	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	140.071264660791	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	2894	False	NA	-11	True	ATTAAA	-21	NA	33025173	32973375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33024999
transcript_93.known	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_2	58	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_-_8967_9189_9325_9667
transcript_930.known	chr1	-	1574	5	FSM	ENSG00000132881.12	ENST00000375599.8	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	5.1720402163943	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGACGTGTTCGTTC	-3	True	NA	-4	True	GATAAA	-22	NA	16237183	16231691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16232298_16232509_16232647_16232892_16233018_16233611_16233765_16236630
transcript_9300.known	chr1	+	478	4	FSM	ENSG00000182004.13	ENST00000470492.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3434.35868184375	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACATTGCTTC	15	True	NA	21	True	AATAAA	-21	NA	203861608	203870077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203861744_203863662_203863726_203865040_203865120_203869876
transcript_93002.nic	chr9	-	1234	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_6	99.7464131624567	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-38	True	NA	-11	True	ATTAAA	-21	NA	33001645	32973375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001566
transcript_93004.nic	chr9	-	1329	8	NIC	ENSG00000137074.20	novel	1345	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	138.154158202247	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	2894	False	NA	-11	True	ATTAAA	-21	NA	33025173	32973375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33024999
transcript_9301.nic	chr1	+	679	4	NIC	ENSG00000182004.13	novel	532	5	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	628	junction_1	3144.10732782596	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	33	False	NA	28	True	AATAAA	-28	NA	203861626	203870084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_203861956_203863662_203863726_203865040_203865120_203869876
transcript_93016.known	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	154.401802666506	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	12	True	NA	42	True	NA	NA	NA	33001595	32972706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
transcript_93017.known	chr9	-	1068	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	127.93542207779	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-34	True	NA	-11	True	ATTAAA	-21	NA	33001641	32973375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_93019.known	chr9	-	1962	7	FSM	ENSG00000137074.20	ENST00000472896.6	1962	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	160.71550087724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-6	True	NA	-13	True	AATAAA	-10	NA	33001613	32972619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001515
transcript_9304.known	chr1	+	967	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	6601	junction_1	458.779055997789	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATTGCTTCTTAC	9	True	NA	25	True	AATAAA	-25	NA	203861602	203870081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
transcript_93048.known	chr9	-	2728	6	FSM	ENSG00000137074.20	ENST00000672244.1	2728	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	140.242076425016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGAGTGAGACCC	5	True	NA	NA	False	NA	NA	NA	33001602	32971449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_9305.known	chr1	+	355	3	FSM	ENSG00000182004.13	ENST00000367208.1	355	3	0	0	0	0	multi-exon	FALSE	canonical	3	6845	junction_1	414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATACTATGGGATTGT	1483	False	NA	-5	True	NA	NA	NA	203863624	203870051	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_203863726_203865040_203865120_203869876
transcript_93050.known	chr9	-	952	6	FSM	ENSG00000137074.20	ENST00000474658.7	952	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	149.081722555114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAGGTCTGACCATTG	28	True	NA	NA	False	NA	NA	NA	33001579	32973241	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32989758_32989896_33001566
transcript_93054.known	chr9	-	645	2	FSM	ENSG00000137074.20	ENST00000473270.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCCCATAATCTTGTTG	7	True	NA	NA	False	NA	NA	NA	33025110	33015887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33016226_33024803
transcript_93055.known	chr9	-	1977	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	139.687844415865	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-21	True	NA	-9	True	AATAAA	-14	NA	33001628	32972615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_93056.known	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	156.710574249578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-21	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_93057.known	chr9	-	1846	7	FSM	ENSG00000137074.20	ENST00000436040.7	1846	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	161.042437471204	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTATTCAGTTGTTT	-1	True	NA	-12	True	AATAAA	-11	NA	33025118	32972618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33025022
transcript_93058.known	chr9	-	2022	8	FSM	ENSG00000137074.20	ENST00000483148.6	2022	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	137.977667521573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTCCCTGAGAATAAA	20	True	NA	-42	True	AAAAAG	-20	NA	33001587	32972648	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001332
transcript_93059.known	chr9	-	1345	8	FSM	ENSG00000137074.20	ENST00000463596.6	1345	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	157.24490193222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	85	False	NA	-11	True	ATTAAA	-21	NA	33001522	32973375	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001332
transcript_93064.known	chr9	+	2319	9	FSM	ENSG00000086061.16	ENST00000330899.5	2319	9	0	0	0	0	multi-exon	FALSE	canonical	3	1987	junction_5	129.314297353386	1122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCACTACAGGCTTT	-1	True	NA	14	True	AATATA	-22	NA	33025272	33039907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33025384_33026474_33026617_33026812_33026991_33029884_33029990_33030439_33030668_33034215_33034331_33036573_33036690_33037014_33037116_33038684
transcript_93078.known	chr9	+	3752	4	FSM	ENSG00000233554.6	ENST00000654325.1	3752	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAAATAGTGTAAGTC	948	False	NA	NA	False	AATATA	-7	NA	33166947	33182865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33167047_33177419_33177470_33178895_33178958_33179324
transcript_93079.known	chr9	-	1396	8	FSM	ENSG00000107262.26	ENST00000379707.7	1396	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	259.341709813481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCTCCTATCTGTTT	-10	True	NA	-32	True	AATGAA	-23	NA	33264720	33255048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262104_33262247_33262701_33262831_33264223
transcript_9308.known	chr1	-	776	5	FSM	ENSG00000174567.8	ENST00000308302.4	776	5	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	9.62743475698485	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-5	True	NA	-6	True	ATTAAA	-20	NA	204213988	204198162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_204198497_204199194_204199259_204201632_204201812_204202895_204202988_204213881
transcript_93080.known	chr9	-	1128	7	FSM	ENSG00000107262.26	ENST00000379704.7	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	555	junction_6	40.6762283841011	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTCTCTGTGGTTGT	1115	False	NA	-9	True	AGTAAA	-18	NA	33264571	33255025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33264223
transcript_93081.known	chr9	+	399	4	FSM	ENSG00000122711.9	ENST00000379721.4	399	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGGTCAGTGTCTCT	-1	True	NA	7	True	AATAAA	-18	NA	33240166	33248567	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33240270_33245111_33245153_33246615_33246729_33248425
transcript_93084.known	chr9	+	1901	8	FSM	ENSG00000086065.14	ENST00000223500.9	1901	8	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	59.6322060635023	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGAAGTCTCTGTA	11	True	NA	NA	False	AATAAA	-16	NA	33265048	33282070	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33278112_33278226_33280808
transcript_93088.known	chr9	+	1957	7	FSM	ENSG00000086065.14	ENST00000419016.6	1957	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	295.392394395432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTAGAAGTCTCTGT	6	True	NA	NA	False	AATAAA	-15	NA	33264878	33282069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33280808
transcript_93092.known	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	24.021841912911	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	15	True	NA	5	True	AATAAA	-15	NA	33290544	33348723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
transcript_93094.known	chr9	-	1825	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	3.13687742827162	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTGTGCAAATATC	1	True	NA	-13	True	AATAAA	-19	NA	33447593	33441159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
transcript_93095.known	chr9	-	4834	26	FSM	ENSG00000165271.17	ENST00000297990.9	4834	26	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_21	16.8380521438793	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCGTGTCCTTCCTAG	-18	True	NA	-1	True	NA	NA	NA	33473924	33461352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
transcript_931.known	chr1	-	336	4	FSM	ENSG00000132881.12	ENST00000434014.1	336	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	6.59966329107444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGACGTGCCCGAGCGG	521	False	NA	NA	False	NA	NA	NA	16236659	16232280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16232298_16232509_16232647_16233611_16233765_16236630
transcript_9310.nnic	chr1	-	877	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-165	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.8598144292178	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	NA	False	NA	-6	True	ATTAAA	-20	NA	204214153	204198162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_204198497_204201632_204201812_204202895_204202988_204213881
transcript_93101.nic	chr9	+	1531	9	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-214	31786	-214	1669	5prime_fragment	FALSE	canonical	2	7	junction_3	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	NA	False	NA	NA	False	AAAAAG	-45	NA	33524036	33541227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
transcript_93103.known	chr9	+	4477	5	FSM	ENSG00000107341.5	ENST00000263228.4	4477	5	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_4	34.5940746371398	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGACCCTCTTCTTTT	-3	True	NA	35	True	AATAAA	-36	NA	33817159	33920399	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_33817935_33886880_33886968_33900173_33900272_33911963_33912099_33917017
transcript_93106.known	chr9	-	4275	29	FSM	ENSG00000137073.24	ENST00000379238.7	4275	29	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_17	41.3471490515837	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTCTCTGTGTGGTGTG	-2	True	NA	-7	True	AATAAA	-15	NA	34048887	33921692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_9311.nic	chr1	-	1639	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-165	0	intron_retention	FALSE	canonical	3	54	junction_1	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	NA	False	NA	-6	True	ATTAAA	-20	NA	204214153	204198162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_204199259_204201632_204201812_204202895_204202988_204213881
transcript_93113.nic	chr9	-	437	5	ISM	ENSG00000137073.24	ENST00000683084.1	4165	25	0	67201	0	5399	5prime_fragment	FALSE	canonical	3	251	junction_4	36.1317035302793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATTCAGAAAACAAAGA	-2	True	NA	-69	True	AAAAAG	-13	NA	34048887	33989081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_93114.known	chr9	-	3592	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	17.832554500127	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTGAGTGAGTATT	-9	True	NA	-6	True	AATAAA	-16	NA	34126698	34086386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
transcript_93118.known	chr9	+	2705	7	FSM	ENSG00000165006.14	ENST00000297661.9	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	35.573476386519	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	-7	True	NA	10	True	AATAAA	-14	NA	34179042	34252523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34179241_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_9312.nnic	chr1	-	1572	4	NNC	ENSG00000143850.16	novel	414	5	NA	NA	-9986	3356	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	25.5734237050888	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAATAAAAGTGTGAT	-10	True	NA	NA	False	AATAAA	-3	NA	204288375	204270269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_204271375_204273625_204273741_204274728_204274810_204288104
transcript_93121.nnic	chr9	+	2699	7	NNC	ENSG00000165006.14	novel	2029	6	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	119.032791933801	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	361	False	NA	10	True	AATAAA	-14	NA	34179410	34252523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_34179603_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_93123.known	chr9	+	1753	6	FSM	ENSG00000165006.14	ENST00000626262.2	1753	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	124.59277667666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGAAGATTCGG	-5	True	NA	-64	True	NA	NA	NA	34179044	34251698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34179241_34220907_34220949_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_93124.known	chr9	+	2029	6	FSM	ENSG00000165006.14	ENST00000625521.2	2029	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	110.875425591066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGGCCTAGTTGCTG	NA	False	NA	88	True	NA	NA	NA	34179004	34251850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34179241_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_93127.known	chr9	-	6295	13	FSM	ENSG00000186638.17	ENST00000402558.7	6295	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	5.58954877924467	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGACTAGGTGTTAT	-25	True	NA	NA	False	AATACA	-21	NA	34329268	34252379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34286616_34286705_34290173_34290390_34297016_34297115_34306251_34306442_34310723_34311372_34329105
transcript_93128.known	chr9	+	998	5	FSM	ENSG00000164978.18	ENST00000379158.7	998	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.302814907189	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCTTCTAACCTGTT	-2	True	NA	23	True	AATAAA	-16	NA	34329568	34343699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34329600_34336228_34336342_34338712_34338848_34339023_34339167_34343123
transcript_93129.known	chr9	+	960	4	FSM	ENSG00000164978.18	ENST00000346365.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.4697670227235	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	5	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34329600_34338712_34338848_34339023_34339167_34343123
transcript_93131.known	chr9	+	825	3	FSM	ENSG00000164978.18	ENST00000618590.1	825	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	40	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	5	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34329600_34339023_34339167_34343123
transcript_93132.known	chr9	-	648	4	FSM	ENSG00000164972.14	ENST00000379124.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.60232526704263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	41	False	NA	2	True	AATAAA	-20	NA	34381531	34379018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34379182_34379645_34379733_34380896_34381132_34381368
transcript_93133.known	chr9	-	712	4	FSM	ENSG00000164972.14	ENST00000379133.7	712	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.94422221866655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-28	True	NA	2	True	AATAAA	-20	NA	34381600	34379018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34379182_34379645_34379733_34380901_34381132_34381368
transcript_93134.nnic	chr9	-	728	3	NNC	ENSG00000164972.14	novel	648	4	NA	NA	717	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	758	False	NA	2	True	AATAAA	-20	NA	34380814	34379018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_34379182_34379645_34379733_34380336
transcript_93136.known	chr9	-	293	2	FSM	ENSG00000164972.14	ENST00000481295.5	293	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	1797	False	NA	2	True	AATAAA	-20	NA	34379775	34379018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34379182_34379645
transcript_93139.known	chr9	-	1092	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCCTGCTATGTGGAG	0	True	NA	-1	True	AATAAA	-26	NA	34612104	34610485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34611333_34611859
transcript_9314.known	chr1	-	5259	2	FSM	ENSG00000158615.10	ENST00000367188.5	5259	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTTGGTTCAACTT	-3	True	NA	-15	True	AATAAA	-26	NA	204411817	204403380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_204406314_204409491
transcript_93140.known	chr9	-	872	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTACTCAGCCTGC	7	True	NA	-10	True	AATAAA	-17	NA	34612097	34610494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34611333_34612063
transcript_93142.known	chr9	-	828	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	0	0	0	0	multi-exon	TRUE	canonical	3	309	junction_5	26.8788433944287	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGTGCTGGCTTCTTGG	-5	True	NA	-1	True	AATAAA	-18	NA	34620495	34613545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_93144.known	chr9	-	899	7	FSM	ENSG00000137100.16	ENST00000341694.6	899	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	124.716567553081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGAGTGTGCTGGCTT	16	True	NA	-6	True	AATAAA	-13	NA	34620474	34613550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34613872_34614041_34614199_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_93146.known	chr9	-	687	6	FSM	ENSG00000137100.16	ENST00000421919.5	687	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	140.175033440338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGAGTGTGCTGGCTT	47	False	NA	-6	True	AATAAA	-13	NA	34620443	34613550	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34617884_34617972_34618675_34618761_34620368
transcript_93147.known	chr9	-	1672	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	0	0	0	multi-exon	TRUE	canonical	3	867	junction_2	162.243301522401	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-30	True	NA	-24	True	AATAAA	-20	NA	34637787	34634721	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
transcript_93148.known	chr9	-	1842	3	FSM	ENSG00000147955.18	ENST00000497006.2	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	1036	junction_1	113.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGATCTGTTCCATCT	NA	False	NA	-41	True	AATAAA	-3	NA	34637844	34634738	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34635859_34636996_34637421_34637546
transcript_93149.known	chr9	+	1722	13	FSM	ENSG00000137070.19	ENST00000441545.7	1722	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	6.33059151176957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATCCAATGCTGCTTT	-4	True	NA	29	True	AATAAA	-37	NA	34652184	34661902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34652234_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_93151.known	chr9	+	1728	13	FSM	ENSG00000137070.19	ENST00000318041.13	1728	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	8.86002257333467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGAAATTATTATCCA	14	False	NA	19	True	AATAAA	-27	NA	34653934	34661892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_93153.known	chr9	+	1505	12	FSM	ENSG00000137070.19	ENST00000557298.5	1505	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.5487479208153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGGTGTGAATAAAGAGA	25	False	NA	-23	True	NA	NA	NA	34653945	34661850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_93156.known	chr9	+	1756	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	18.5658288260988	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	1	True	NA	NA	False	GGGGCT	-7	NA	34646674	34651035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_9316.known	chr1	+	10050	11	FSM	ENSG00000198625.14	ENST00000367182.8	10050	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	4.1821047332653	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTCATTATTTT	4	True	NA	21	True	ATTAAA	-18	NA	204516405	204558120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_93173.known	chr9	+	1164	9	FSM	ENSG00000213930.12	ENST00000554550.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	64.8401881551866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAATTTGGGCAGATA	-4	True	NA	-33	True	NA	NA	NA	34646635	34650529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_9318.known	chr1	+	9926	10	FSM	ENSG00000198625.14	ENST00000454264.6	9926	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	10.7577132821863	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	-23	True	NA	20	True	ATTAAA	-17	NA	204516378	204558119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204546796_204546878_204549112
transcript_93182.known	chr9	-	338	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	21.6384431561566	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCACCGTACTGACC	-2	True	NA	-19	True	ATTAAA	-10	NA	34666028	34665031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
transcript_93184.known	chr9	+	1410	3	FSM	ENSG00000230074.4	ENST00000654838.1	1410	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTTTTTGAGGCAG	-8	True	NA	NA	False	AAAAAG	-26	NA	34665606	34681981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34665768_34678095_34678269_34680905
transcript_93185.known	chr9	-	465	3	FSM	ENSG00000187186.15	ENST00000416454.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	25.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCGTACTGACCTCCT	-2	True	NA	-15	True	ATTAAA	-14	NA	34666028	34665027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_34665374_34665612_34665681_34665977
transcript_93186.known	chr9	+	665	3	FSM	ENSG00000230074.4	ENST00000434627.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCAATCAGGTGTGT	19	False	NA	NA	False	NA	NA	NA	34665664	34681298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34665768_34678099_34678269_34680905
transcript_93187.known	chr9	+	2391	4	FSM	ENSG00000137094.16	ENST00000312316.9	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	27.0678160675491	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	-26	True	NA	23	True	AATAAA	-18	NA	34989693	34998431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025
transcript_93188.known	chr9	+	2818	4	FSM	ENSG00000137094.16	ENST00000454002.6	2818	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	83.4918492362511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGCAGGAGCAACAAAC	530	False	NA	25	True	AATAAA	-20	NA	34990249	34998433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34990813_34993199_34993445_34996264_34996867_34997025
transcript_93189.known	chr9	+	3068	4	FSM	ENSG00000137094.16	ENST00000545841.5	3068	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	90.0703428808099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTAGGTTCAAGCGAC	546	False	NA	NA	False	NA	NA	NA	34990265	34998900	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_34990612_34993199_34993445_34996264_34996867_34997025
transcript_9319.known	chr1	+	10008	10	FSM	ENSG00000198625.14	ENST00000391947.6	10008	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	9.49203694852157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	-23	True	NA	20	True	ATTAAA	-17	NA	204516378	204558119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_93190.nic	chr9	+	2353	4	NIC	ENSG00000137094.16	novel	5228	3	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	88.1904504782437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGAGCAGGAGCAA	978	False	NA	20	True	AATAAA	-15	NA	34991313	34998428	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_34991417_34993199_34993445_34996264_34996867_34997025
transcript_93193.nic	chr9	-	2465	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	73.3618721524627	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-2	True	NA	-21	True	AGTAAA	-13	NA	35080046	35073838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
transcript_93194.nnic	chr9	-	2447	15	NNC	ENSG00000221829.10	novel	2556	14	NA	NA	-104	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_6	96.2804152844541	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-2	True	NA	-21	True	AGTAAA	-13	NA	35080046	35073838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076449_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
transcript_93201.known	chr9	-	2556	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	43.7384642441624	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-11	True	NA	-21	True	AGTAAA	-13	NA	35079942	35073838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_93203.nnic	chr9	-	2642	14	NNC	ENSG00000221829.10	novel	2556	14	NA	NA	-104	0	intron_retention	FALSE	canonical	3	41	junction_6	81.6082429993673	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-2	True	NA	-21	True	AGTAAA	-13	NA	35080046	35073838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076449_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_9321.nic	chr1	+	2425	15	NIC	ENSG00000163531.17	novel	4957	24	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	16.5517124090974	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	NA	False	NA	5	True	ATTAAA	-14	NA	204929342	204977139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_204929503_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_93211.nnic	chr9	-	2536	13	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-104	0	intron_retention	FALSE	canonical	2	16	junction_1	87.1133919415124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-2	True	NA	-21	True	AGTAAA	-13	NA	35080046	35073838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35074217_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_9322.known	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	13.8740365030833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	20	True	NA	5	True	ATTAAA	-14	NA	204828694	204977139	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_93220.known	chr9	-	2464	12	FSM	ENSG00000165282.14	ENST00000361778.6	2464	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	32.8799469143566	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-3	True	NA	-47	True	AATAAA	-15	NA	35096601	35088688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_93221.nic	chr9	-	3712	11	NIC	ENSG00000165282.14	novel	2464	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	62	junction_10	23.1734762174344	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	0	True	NA	-47	True	AATAAA	-15	NA	35096598	35088688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_93229.known	chr9	-	1365	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	1470	junction_9	189.520903436814	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTTTTGTCTTCAAG	1	True	NA	NA	False	NA	NA	NA	35103131	35099777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_9323.known	chr1	-	4290	14	FSM	ENSG00000117222.14	ENST00000367164.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.6858238753803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-12	True	NA	-21	True	AATAAA	-21	NA	205122015	205086141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205088816_205094986_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_93233.known	chr9	-	1293	9	FSM	ENSG00000165283.16	ENST00000619795.4	1293	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	629.755098728863	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	9193	False	NA	NA	False	NA	NA	NA	35103195	35099775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35103049
transcript_93236.known	chr9	-	1296	9	FSM	ENSG00000165283.16	ENST00000452248.6	1296	9	0	0	0	0	multi-exon	TRUE	canonical	2	84	junction_4	621.613814498198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	9193	False	NA	NA	False	NA	NA	NA	35103195	35099775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_9324.known	chr1	-	4367	14	FSM	ENSG00000117222.14	ENST00000264515.11	4367	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.9409217454284	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-3	True	NA	-21	True	AATAAA	-21	NA	205121978	205086141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_93246.known	chr9	-	2566	10	FSM	ENSG00000005238.20	ENST00000378566.5	2566	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_7	20.2965666378319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTTGTTGTTGT	16	True	NA	0	True	AATAAA	-30	NA	35115850	35104111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35107569_35108127_35108350_35108593_35108738_35115670
transcript_93248.nic	chr9	-	3236	9	NIC	ENSG00000005238.20	novel	3256	9	NA	NA	-108	0	intron_retention	FALSE	canonical	3	35	junction_8	11.6806463862237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTACTTTTGTTGT	NA	False	NA	-9	True	AATAAA	-21	NA	35115970	35104120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115670
transcript_93249.known	chr9	-	2998	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	16.1690290370201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	4	True	NA	-5	True	AATAAA	-25	NA	35115862	35104116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
transcript_93252.known	chr9	+	6303	39	FSM	ENSG00000198722.15	ENST00000378495.7	6303	39	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_23	25.7616928780816	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTTTGGTAATTCTG	42	False	NA	21	True	AATAAA	-17	NA	35162061	35405338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992_35259051_35295695_35295931_35310466_35310782_35313898_35313990_35366946_35366994_35370317_35370397_35375126_35375202_35376027_35376248_35377467_35377696_35378294_35378437_35380469_35380640_35381099_35381216_35381555_35381720_35382356_35382508_35384245_35384315_35385723_35385814_35386164_35386294_35389845_35389974_35390628_35390715_35396475_35396603_35396840_35396938_35397166_35397311_35397634_35397713_35398210_35398289_35398553_35398643_35398881_35399035_35399160_35399285_35399391_35399449_35399648_35399730_35400295_35400444_35403166_35403260_35403439_35403600_35403747
transcript_93253.nic	chr9	+	1856	7	ISM	ENSG00000198722.15	ENST00000634487.1	5063	42	-147	144001	-35	16703	5prime_fragment	FALSE	canonical	3	181	junction_5	12.4632793972266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAAGTGTG	-18	True	NA	NA	False	NA	NA	NA	35161956	35260053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992
transcript_93254.known	chr9	+	5218	12	FSM	ENSG00000198853.12	ENST00000361226.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	9.18856637708602	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	-8	True	NA	18	True	AATAAA	-21	NA	35490110	35561895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35490173_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_93257.nnic	chr9	-	1440	7	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1159	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	5.37742193496723	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACGTGTTAGTCTCATG	2350	False	NA	-27	True	TTTAAA	-4	NA	35617194	35609981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616279_35616599_35616690_35616913
transcript_93260.known	chr9	-	1317	5	NNC	ENSG00000137078.10	novel	1222	5	NA	NA	-19	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	17.2970373185699	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGTTTAGATTTTTA	-14	True	NA	-25	True	AATAAA	-8	NA	35650950	35649302	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35650082_35650183_35650246_35650356_35650415_35650416_35650638_35650753
transcript_93261.known	chr9	-	1222	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATTTTTACCTAGAAG	5	True	NA	-17	True	AATAAA	-16	NA	35650931	35649294	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
transcript_93264.known	chr9	-	3678	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	25.7023223658875	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACATCTACCTGGG	3	True	NA	-1	True	ATTAAA	-18	NA	35665195	35659342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_93272.known	chr9	+	1173	6	FSM	ENSG00000159884.12	ENST00000378409.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	46.4990322479942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATAAAAATAGCCACA	-31	True	NA	NA	False	AATAAA	-16	NA	35658289	35661499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745_35660859_35660939
transcript_93274.known	chr9	+	1264	5	FSM	ENSG00000159884.12	ENST00000426546.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	14.7054411698527	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACATTTACAAAGCTG	-29	True	NA	NA	False	AATAAA	-28	NA	35658291	35661511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745
transcript_93275.known	chr9	+	899	5	FSM	ENSG00000159884.12	ENST00000378407.7	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	76.3053078101386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	-17	True	NA	14	True	ACTAAA	-19	NA	35658303	35661186	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660773
transcript_93277.known	chr9	-	4498	12	FSM	ENSG00000137135.18	ENST00000490638.5	4498	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.881658561975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTACTGTCTTTATTTT	9899	False	NA	0	True	NA	NA	NA	35675866	35658874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35659174_35660093_35660968_35661712_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35669583_35669709_35673810
transcript_93278.known	chr9	+	804	6	FSM	ENSG00000159884.12	ENST00000327351.6	804	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	76.2810592480204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCATGATGGAGTGCTC	-4	True	NA	5	True	ACTAAA	-10	NA	35658316	35661177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660765_35660859_35660939
transcript_93279.known	chr9	+	1016	4	FSM	ENSG00000159884.12	ENST00000378406.5	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	11.6714276000077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGCTCCTGTGTGTTT	-7	True	NA	15	True	ACTAAA	-20	NA	35658313	35661187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556
transcript_9328.known	chr1	-	8010	13	FSM	ENSG00000133059.17	ENST00000367162.8	8010	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	5.45371942398539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTATCTGTTTGGT	11	True	NA	-9	True	AATAAA	-17	NA	205211702	205142504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205147746_205148204_205148340_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
transcript_93289.known	chr9	-	1018	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_4	88.2662874488329	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	7469	False	NA	-22	True	AATAAA	-17	NA	35689913	35682013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_9329.known	chr1	-	7739	12	FSM	ENSG00000133059.17	ENST00000367161.7	7739	12	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	8.54932214218818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTATCTGTTTGGT	-12	True	NA	-9	True	AATAAA	-17	NA	205211566	205142504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205147746_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
transcript_93291.nic	chr9	-	1365	9	NIC	ENSG00000198467.16	novel	1018	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	238	junction_4	204.244797975371	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	-3	True	NA	-22	True	AATAAA	-17	NA	35689928	35682013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_93292.known	chr9	-	1182	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	284.793099240484	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTTGGCAATGGA	9911	False	NA	-1	True	AATAAA	-38	NA	35690056	35681992	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_93293.known	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	257.060304208954	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	0	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_93295.known	chr9	-	1185	9	FSM	ENSG00000198467.16	ENST00000647435.1	1185	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	341.45495218989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTCCATGCTGTTTT	0	True	NA	-18	True	AATAAA	-8	NA	35689925	35682936	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_933.known	chr1	-	6227	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_8	8.24621125123532	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-24	True	NA	0	True	AATAAA	-18	NA	16352480	16246839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
transcript_9330.known	chr1	-	3391	7	FSM	ENSG00000163545.11	ENST00000367157.6	3391	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	22.762664362699	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCCTGCTGTTCTCTT	5	True	NA	-6	True	ATTAAA	-20	NA	205321745	205302062	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205304514_205305198_205305332_205306187_205306308_205308164_205308231_205308580_205308733_205311704_205311826_205321397
transcript_93305.known	chr9	-	8623	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_20	47.8185211961616	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGTAAGTGTCTGAG	179	False	35732211	NA	False	NA	NA	NA	35732195	35696947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_93307.known	chr9	-	3611	17	FSM	ENSG00000070610.14	ENST00000378103.7	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	235	junction_14	60.6096307838119	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-23	True	NA	-4	True	AATAAA	-16	NA	35749228	35736865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_93310.known	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	25.1044692236263	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	0	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_93313.known	chr9	+	1496	8	FSM	ENSG00000107175.12	ENST00000486056.1	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_4	26.6236046870181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGGCTTTCTGGGTCT	-22	True	NA	13	True	NA	NA	NA	35732597	35736860	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35732902_35732995_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_93314.known	chr9	+	7028	9	FSM	ENSG00000107185.10	ENST00000378078.5	7028	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	1.61535599791501	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAATGTCT	-27	True	NA	NA	False	AATGAA	-9	NA	35749286	35758585	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_35749409_35749736_35749872_35750242_35750380_35750657_35750742_35750839_35750990_35751265_35751413_35751626_35751755_35751955_35752146_35752650
transcript_93318.known	chr9	-	515	3	FSM	ENSG00000215183.5	ENST00000414286.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCTCACTGTCC	533	False	NA	0	True	AATAAA	-17	NA	35756613	35752991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35753281_35753659_35753769_35756496
transcript_93319.known	chr9	-	677	3	FSM	ENSG00000215183.5	ENST00000436428.3	677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGACTCTCACTGTCCAC	-7	True	NA	2	True	AATAAA	-19	NA	35754276	35752989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35753281_35753659_35753769_35753999
transcript_93327.nic	chr9	+	1791	7	ISM	ENSG00000137103.20	ENST00000377988.6	3731	13	16410	422	16131	-422	3prime_fragment	FALSE	canonical	3	39	junction_4	19.5419776094665	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGGTTCTGTGATGCC	NA	False	NA	21	True	NA	NA	NA	35845907	35854424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_35846069_35846257_35846382_35846468_35846612_35846816_35846996_35852826_35852974_35853140_35853258_35853504
transcript_9333.nic	chr1	-	1108	4	Fusion	ENSG00000186007.10_ENSG00000281406.2	novel	741	4	NA	NA	-265	0	multi-exon	FALSE	canonical	3	9	junction_1	5.8878405775519	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	745	False	NA	NA	False	ATTAAA	-35	NA	205456351	205381380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chr1_-_205381857_205384287_205384365_205420454_205420575_205455916
transcript_93330.known	chr9	-	649	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	20.2113829314077	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	2	True	NA	-2	True	AATAAA	-16	NA	35815042	35812959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
transcript_93331.known	chr9	-	853	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	192.445446815455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	NA	False	NA	-2	True	AATAAA	-16	NA	35815354	35812959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
transcript_93332.nnic	chr9	-	765	5	NNC	ENSG00000137133.11	novel	853	5	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_4	199.357091672205	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	NA	False	NA	-2	True	AATAAA	-16	NA	35815388	35812959	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815128
transcript_93333.nic	chr9	+	847	4	ISM	ENSG00000137103.20	ENST00000439587.6	2150	11	16680	0	16131	0	3prime_fragment	FALSE	canonical	3	55	junction_2	18.6607133363712	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCACACTCTGTCCA	NA	False	NA	19	True	AATAAA	-18	NA	35845907	35847235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_35846069_35846257_35846382_35846468_35846612_35846816
transcript_93335.known	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	68.1311923791152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	3	True	NA	30	True	ATTAAA	-27	NA	36036939	36086195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
transcript_93338.known	chr9	+	4412	21	FSM	ENSG00000122707.12	ENST00000377966.4	4412	21	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_16	78.7114985246755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCTTCTAAGCAATGT	-24	True	NA	15	True	AATAAA	-20	NA	36036912	36124455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956_36110080_36112304_36112477_36116984_36117178_36118756_36118968_36120662_36120737_36121532_36121689_36122823
transcript_93339.known	chr9	+	1895	5	FSM	ENSG00000122694.16	ENST00000377960.9	1895	5	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_1	13.7727085208393	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	10	True	NA	18	True	AATAAA	-19	NA	36136732	36163906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36150871_36150950_36162361
transcript_93344.known	chr9	+	812	4	FSM	ENSG00000122694.16	ENST00000377959.5	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	113.620225116638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGCGTCGTAATCTA	19	True	NA	NA	False	NA	NA	NA	36136741	36162910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36162361
transcript_93345.nnic	chr9	+	962	5	NNC	ENSG00000122705.17	novel	1181	6	NA	NA	-181	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	690.565348102553	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	36190674	36212059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_36190912_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_93347.known	chr9	+	1078	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	71.8692388995459	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	-18	True	NA	30	True	AATAAA	-19	NA	36190920	36212059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_9335.known	chr1	-	637	3	FSM	ENSG00000186007.10	ENST00000495594.2	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGCGTTTTTCTTTC	1142	False	NA	NA	False	ATTAAA	-38	NA	205455954	205381377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205381857_205420454_205420575_205455916
transcript_93356.nic	chr9	+	2683	18	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_1	107.133522743825	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	-40	True	NA	-52	True	AATAAA	-17	NA	36572854	36677682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_36573199_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93357.known	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	82.5116957212482	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	0	True	NA	-52	True	AATAAA	-17	NA	36572894	36677682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_9336.known	chr1	+	2986	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	12.397132284883	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	-24	True	NA	22	True	AATATA	-20	NA	205504668	205532790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_93368.known	chr9	+	2363	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	111.530527631452	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_9337.known	chr1	+	2143	16	FSM	ENSG00000117266.16	ENST00000506784.5	2143	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.4904881086917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTAGTCCCCCTTTCTG	-1	True	NA	NA	False	NA	NA	NA	205504597	205531786	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_205504797_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_93372.known	chr9	+	2342	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	109.831618284536	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93374.known	chr9	+	2400	17	FSM	ENSG00000165304.8	ENST00000543751.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	91.5686004793674	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_9338.known	chr1	+	1134	7	FSM	ENSG00000117266.16	ENST00000512922.5	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	11.146748404804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCCTCGGGGGCAG	-3	True	NA	NA	False	NA	NA	NA	205504595	205526835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_205504797_205523146_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774
transcript_93382.known	chr9	+	2236	16	FSM	ENSG00000165304.8	ENST00000545008.5	2236	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	114.416471230714	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	2	True	NA	-53	True	AATAAA	-16	NA	36572896	36677681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93386.nic	chr9	+	2261	16	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	118.827531415166	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	-39	True	NA	-52	True	AATAAA	-17	NA	36572855	36677682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_36573008_36581643_36581740_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93387.known	chr9	+	1966	16	FSM	ENSG00000165304.8	ENST00000626154.2	1966	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	133.067334667662	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCATTGGAACTACCA	35	True	NA	NA	False	CATAAA	-25	NA	36572929	36677417	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93396.known	chr9	+	2125	15	FSM	ENSG00000165304.8	ENST00000536987.5	2125	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	133.975801196046	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	0	True	NA	-53	True	AATAAA	-16	NA	36572894	36677681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_36573008_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_93406.known	chr9	+	2365	3	FSM	ENSG00000281649.3	ENST00000664088.2	2404	3	39	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTGCTTTACTGAC	-8	True	NA	7	True	ATTAAA	-18	NA	37079897	37088704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080031_37080341_37080537_37086667
transcript_93407.known	chr9	+	311	2	FSM	ENSG00000281649.3	ENST00000625218.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAATCAGTGTTTGATCC	29	False	NA	NA	False	NA	NA	NA	37079934	37086874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080039_37086667
transcript_93409.known	chr9	+	636	2	FSM	ENSG00000281649.3	ENST00000631093.1	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAGAAGCAATTCAAGAC	2	True	NA	NA	False	NA	NA	NA	37079907	37087176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080035_37086667
transcript_9341.known	chr1	-	6399	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	22.4623141184419	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	14	True	NA	-3	True	AATAAA	-21	NA	205750182	205712821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_93411.known	chr9	+	579	2	FSM	ENSG00000281649.3	ENST00000627197.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCGTGCCAGCAGTCT	31	False	NA	NA	False	NA	NA	NA	37079936	37087152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080031_37086667
transcript_93413.known	chr9	+	4520	2	FSM	ENSG00000281649.3	ENST00000625445.1	4520	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTACCCTCTTTCT	NA	False	NA	3	True	AATATA	-19	NA	37079856	37090507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37080537_37086667
transcript_93418.known	chr9	+	2584	9	FSM	ENSG00000147905.18	ENST00000336755.10	2584	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	30.4689903836671	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	-18	True	NA	15	True	AATAAA	-16	NA	37120573	37358149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_93424.nnic	chr9	+	1951	9	NIC	ENSG00000147905.18	novel	2828	9	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	42.1893055169198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCCATTCCTAGAGTT	9	True	NA	27	True	AATAAA	-27	NA	37120600	37357390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120777_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_93428.nnic	chr9	+	2636	8	NIC	ENSG00000147905.18	novel	2584	9	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	56.703309481215	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	-16	True	NA	15	True	AATAAA	-16	NA	37120477	37358149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120624_37126311_37126943_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_93429.nnic	chr9	+	1973	8	NIC	ENSG00000147905.18	novel	2584	9	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	52.0541319499348	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	60	False	NA	15	True	AATAAA	-16	NA	37120553	37358149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120624_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_93435.nnic	chr9	+	2424	7	NIC	ENSG00000147905.18	novel	2584	9	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	59.7569149880488	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	70	False	NA	15	True	AATAAA	-16	NA	37120563	37358149	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120624_37126311_37126943_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_93437.nnic	chr9	+	1402	3	NNC	ENSG00000147905.18	novel	2584	9	NA	NA	-96	-23654	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	28.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAAAATAG	-16	True	NA	NA	False	NA	NA	NA	37120477	37163400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_37120624_37126311_37126943_37162775
transcript_93438.nic	chr9	+	1004	3	NIC	ENSG00000147905.18	novel	1219	4	NA	NA	-32	-52	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	29	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCACTGCTTTTTTCT	48	False	NA	NA	False	AGTAAA	-19	NA	37120541	37187002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120624_37126311_37126943_37186711
transcript_93440.nnic	chr9	+	1098	3	NIC	ENSG00000147905.18	novel	1219	4	NA	NA	3	-52	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCACTGCTTTTTTCT	9	True	NA	NA	False	AGTAAA	-19	NA	37120600	37187002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37120777_37126311_37126943_37186711
transcript_93443.nic	chr9	+	1240	9	NIC	ENSG00000137106.18	novel	1250	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	189.895653912879	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATAACTCGTGCCAGT	87	False	NA	NA	False	ATTAAA	-16	NA	37422654	37432811	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37432532
transcript_93444.known	chr9	+	1704	9	FSM	ENSG00000137106.18	ENST00000607784.1	1704	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	188.964116964042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGCAACCAAAAACCAT	43	False	NA	NA	False	NA	NA	NA	37422745	37434879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37434045
transcript_93446.known	chr9	+	1250	9	FSM	ENSG00000137106.18	ENST00000318158.11	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	65.2369479283021	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCTTGGCCTGTAAAT	-7	True	NA	11	True	ATTAAA	-14	NA	37422695	37436990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_93451.known	chr9	+	1080	9	FSM	ENSG00000137106.18	ENST00000460882.5	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	141.939192526236	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGGATCCACAGGCAG	-7	True	NA	NA	False	NA	NA	NA	37422695	37436848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_93463.known	chr9	+	602	6	FSM	ENSG00000137106.18	ENST00000491488.5	602	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	226.629742090486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCGCAACACCATGTC	22	True	NA	NA	False	NA	NA	NA	37422724	37436692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422834_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_93465.nic	chr9	+	788	5	ISM	ENSG00000137106.18	ENST00000377824.8	1844	7	-59	2948	-11	-387	5prime_fragment	FALSE	canonical	3	401	junction_1	70.26556767009	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCACCAGGTGATAAAAGCA	87	False	NA	21	True	AATAAA	-23	NA	37422654	37428771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_93466.known	chr9	+	1136	5	FSM	ENSG00000137106.18	ENST00000493368.5	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	174.449132987241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAACAGCCCTGCCTC	98	False	NA	NA	False	NA	NA	NA	37422665	37429158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_93469.known	chr9	+	952	3	FSM	ENSG00000137106.18	ENST00000487399.5	952	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTAAGTGAACGCAGAC	11	True	NA	NA	False	NA	NA	NA	37422713	37426650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37422806_37424844_37424976_37425921
transcript_93472.known	chr9	+	1893	4	FSM	ENSG00000137106.18	ENST00000480596.5	1893	4	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_3	5.35412613473634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCGTCTTGGCCTGTA	5835	False	NA	8	True	ATTAAA	-11	NA	37428537	37436987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37429837_37430510_37430647_37432007_37432139_37436660
transcript_93473.known	chr9	+	1805	13	FSM	ENSG00000137054.16	ENST00000442009.6	1805	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.2092482098988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACAGAGTGAGACCTTG	-19	True	NA	NA	False	NA	NA	NA	37485947	37503553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492281_37492376_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_93475.known	chr9	+	1855	12	FSM	ENSG00000137054.16	ENST00000377798.9	1855	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	5.9153812672718	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTGGTATTAT	-19	True	NA	14	True	TATAAA	-23	NA	37485947	37503697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_93479.nnic	chr9	-	1397	4	NNC	ENSG00000122696.14	novel	1871	4	NA	NA	0	31535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.1928941054479	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGATTGTTCATTGCT	-13	True	NA	NA	False	ATTAAA	-17	NA	37904127	37847864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_37848966_37881517_37881632_37899828_37899951_37904067
transcript_93480.known	chr9	-	808	2	FSM	ENSG00000175768.13	ENST00000377773.9	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-6	True	NA	86	True	AATAAA	-18	NA	37592597	37588412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37588933_37592309
transcript_93481.known	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4473	junction_1	0	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-6	True	NA	86	True	AATAAA	-18	NA	37592597	37588412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37588933_37592411
transcript_93482.known	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-13	True	NA	41	True	NA	NA	NA	37592604	37588457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37588933_37592290
transcript_93488.known	chr9	+	2293	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.3474060048428	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTAAGTCTGTCTT	-6	True	NA	8	True	ATTAAA	-17	NA	37753804	37778972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_93494.known	chr9	+	1443	9	FSM	ENSG00000165275.10	ENST00000488673.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	18.7812240016459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCAGCTGCAGGAG	6	True	NA	-8	True	AATAAA	-5	NA	37753816	37778022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763866_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_93499.known	chr9	+	1881	8	FSM	ENSG00000165275.10	ENST00000377754.6	1881	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.1650462714701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGTCTGATCATGCTC	6	True	NA	NA	False	CATAAA	-18	NA	37753816	37778681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37753853_37761902_37762118_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_93507.known	chr9	-	1813	4	FSM	ENSG00000107371.14	ENST00000327304.10	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_2	82.5927088522683	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTCGTGTGTTTCTAA	-3	True	NA	NA	False	GATAAA	-7	NA	37785064	37779713	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37784720
transcript_93508.known	chr9	+	2108	8	FSM	ENSG00000165275.10	ENST00000537911.5	2108	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.8735577984136	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAGTATTGATTAAGT	-8	True	NA	1	True	ATTAAA	-10	NA	37753802	37778965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37769940_37770020_37770671_37770740_37776281_37776406_37777627
transcript_93509.known	chr9	-	768	3	FSM	ENSG00000107371.14	ENST00000396521.3	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	251.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTCAGAAGATAAGGT	-3	True	NA	NA	False	NA	NA	NA	37785064	37780606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37780881_37783913_37784064_37784720
transcript_93510.known	chr9	-	2253	3	FSM	ENSG00000107371.14	ENST00000465860.6	2253	3	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_1	94.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGATACATTTCACAAC	316	False	NA	-99	True	AATATA	-19	NA	37784745	37780059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37782138_37783913_37784064_37784720
transcript_93514.known	chr9	-	1171	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTTGGCCTCTTTTTT	-13	True	NA	-20	True	AATAGA	-15	NA	37904127	37887603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_37888593_37899828_37899951_37904067
transcript_93516.known	chr9	+	584	3	FSM	ENSG00000137124.8	ENST00000635162.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGAGTCTTACGCCTT	-27	True	NA	NA	False	NA	NA	NA	38392711	38396138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_38392808_38394476_38394566_38395739
transcript_93518.known	chr9	+	3028	2	FSM	ENSG00000137124.8	ENST00000377698.4	3028	2	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	-37	True	NA	22	True	AATAAA	-22	NA	38392701	38398661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_38392808_38395739
transcript_93523.known	chr9	-	3566	5	FSM	ENSG00000137142.5	ENST00000377694.2	3566	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	31.2969647090577	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGGTGTCTTTGTT	-1	True	NA	-4	True	AATAAA	-15	NA	38424454	38406527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_38409218_38411390_38411550_38413236_38413354_38414093_38414204_38423964
transcript_93525.nnic	chr9	-	1587	11	NNC	ENSG00000180071.20	novel	3971	16	NA	NA	-42	4877	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	3.16385840391128	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAAGAAATATATT	1878	False	NA	NA	False	AATAAA	-15	NA	38620638	38596291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_38596404_38601130_38601202_38603158_38603213_38604152_38604288_38604862_38604917_38607425_38607494_38610272_38610411_38611214_38611322_38615593_38615768_38615929_38616045_38620079
transcript_93535.nic	chr9	-	1172	3	ISM	ENSG00000106714.18	ENST00000377656.6	4986	23	209538	221	7383	-221	3prime_fragment	FALSE	canonical	3	19	junction_2	7	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACTTCTTACACAGAGT	NA	False	NA	NA	False	ACTAAA	-19	NA	39078765	39072987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_39074012_39078384_39078457_39078689
transcript_93536.nnic	chr9	-	797	3	NNC	ENSG00000278175.5	novel	902	3	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	13.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	1	True	NA	NA	False	AATAAA	-15	NA	39810061	39803495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_39803860_39809485_39809588_39809730
transcript_93537.known	chr9	-	826	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	15	0	-13	multi-exon	FALSE	canonical	3	34	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	0	True	NA	NA	False	AATAAA	-15	NA	39810062	39803495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39803860_39809485_39809616_39809730
transcript_93538.known	chr9	-	694	2	FSM	ENSG00000278175.5	ENST00000666906.2	1012	2	305	13	96	-13	multi-exon	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	247	False	NA	NA	False	AATAAA	-15	NA	39809815	39803495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39803860_39809485
transcript_93539.known	chr9	-	1397	2	FSM	ENSG00000278175.5	ENST00000670314.1	1397	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	-10	True	NA	NA	False	AATAAA	-21	NA	39810072	39808560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39809616_39809730
transcript_9354.nic	chr1	-	776	6	ISM	ENSG00000069275.13	ENST00000367142.5	6399	7	-72	6742	-72	-1112	5prime_fragment	FALSE	canonical	3	35	junction_5	15.7047763435205	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATGCCCAAACC	26	False	NA	51	True	AAAAAG	-43	NA	205750254	205719563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_93543.nnic	chr9	-	2070	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	-372	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTGTTTCATATGCTT	NA	False	NA	NA	False	TATAAA	-17	NA	39874578	39816542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_93544.nnic	chr9	-	1636	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874200	39816598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_93545.known	chr9	-	1888	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874562	39816598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_39817730_39818820_39818925_39873909
transcript_93549.nnic	chr9	+	1539	7	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	0	-1072	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	17.1796067734069	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATTAACTGCTTACT	-8	True	NA	1	True	AATAAA	-28	NA	40992247	41014132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_93550.nnic	chr9	+	1138	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	-18	-1072	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	18.0820352836731	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATTAACTGCTTACT	NA	False	NA	1	True	AATAAA	-28	NA	40992226	41014132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_93551.nnic	chr9	+	1413	6	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	0	-1072	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	16.5093912667912	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATTAACTGCTTACT	-8	True	NA	1	True	AATAAA	-28	NA	40992247	41014132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_93571.nic	chr9	-	1509	16	NIC	ENSG00000215126.11	novel	1979	22	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	369.112593481537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41189372	41131677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41161600_41161724_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_93572.known	chr9	-	1813	16	FSM	ENSG00000215126.11	ENST00000494538.6	1813	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	381.8074558378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	42	False	NA	NA	False	ATTAAA	-15	NA	41189301	41131355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41161600_41161724_41162332_41162378_41166783_41166831_41170283_41170424_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_93580.nic	chr9	-	1728	15	NIC	ENSG00000215126.11	novel	1554	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_7	363.55966862822	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	-2	True	NA	NA	False	AATAAA	-16	NA	41189345	41131308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_93585.nic	chr9	-	1381	15	NIC	ENSG00000215126.11	novel	2433	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_7	363.55966862822	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41189367	41131677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_9359.known	chr1	-	3308	6	FSM	ENSG00000117280.13	ENST00000367139.8	3308	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	38.0809663742926	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	-14	True	NA	-12	True	AATAAA	-19	NA	205775482	205767985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775272
transcript_93594.nic	chr9	-	1263	13	NIC	ENSG00000215126.11	novel	2433	17	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	386.478645018784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41189424	41131677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41166783_41166831_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_9360.known	chr1	-	1723	6	FSM	ENSG00000117280.13	ENST00000235932.8	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	34.8114923552553	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	19	True	NA	NA	False	NA	NA	NA	205775449	205769436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775373
transcript_93604.nic	chr9	-	654	3	ISM	ENSG00000215126.11	ENST00000617933.1	721	7	12	11494	12	-11494	5prime_fragment	FALSE	canonical	3	947	junction_1	237	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAAAGTGTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	41189424	41183413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_41183661_41185992_41186080_41189104
transcript_93608.known	chr9	+	559	3	FSM	ENSG00000231527.7	ENST00000657353.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTTGTAAGTTT	2370	False	NA	NA	False	AAGAAA	-18	NA	61856570	61975965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_61856815_61917467_61917608_61975790
transcript_93611.known	chr9	+	1890	3	FSM	ENSG00000227449.8	ENST00000377614.7	1890	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTTTGTTATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	62376160	62435199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62376814_62432875_62432980_62434066
transcript_93614.nnic	chr9	+	709	2	NNC	ENSG00000226007.3	novel	2245	2	NA	NA	12	4186	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTATCATCTGTTCCAG	NA	False	NA	NA	False	AATAAA	-20	NA	62532348	62538910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_62532689_62538541
transcript_93615.known	chr9	+	841	3	FSM	ENSG00000226007.3	ENST00000420615.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62532377	62533858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62532689_62532784_62533114_62533657
transcript_93616.known	chr9	+	1567	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897371	62899777	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62897735_62897849_62897980_62898703
transcript_93617.known	chr9	+	667	3	FSM	ENSG00000170161.7	ENST00000671425.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62897370	62898904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_62897735_62897877_62897980_62898703
transcript_93619.known	chr9	-	1610	5	FSM	ENSG00000234665.9	ENST00000445604.7	1610	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.3788038445484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCACATGTAGGATCAAT	NA	False	NA	NA	False	NA	NA	NA	62898095	62865596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_62865734_62866966_62867111_62867696_62868234_62869189_62869305_62897418
transcript_93620.known	chr9	-	1713	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTAACTGCTTTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	62898095	62867202	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_62868234_62869189_62869305_62897528
transcript_93624.nnic	chr9	-	520	4	NNC	ENSG00000237238.3	novel	1120	8	NA	NA	3	-3056	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	63385114	63375858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_63376099_63379122_63379295_63379939_63380012_63385078
transcript_93626.known	chr9	+	4137	15	FSM	ENSG00000172014.12	ENST00000357336.3	4137	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.30149051130633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATATGTGTGGTGATAAT	NA	False	NA	NA	False	AATAAA	-35	NA	64369393	64413142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_64369878_64373186_64373302_64373463_64373638_64377520_64377628_64378673_64378812_64381403_64381460_64388003_64388035_64390716_64390787_64394737_64394823_64397556_64397586_64397676_64397750_64403716_64403788_64407844_64408009_64409434_64409616_64410783
transcript_93663.known	chr9	+	1411	16	FSM	ENSG00000147996.17	ENST00000497250.5	1411	16	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_7	527.930652011543	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	6	False	NA	-1	True	AATAAA	-16	NA	65675895	65733670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93673.nnic	chr9	+	1321	15	NIC	ENSG00000147996.17	novel	1411	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_14	530.288427486901	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	1	True	AATAAA	-18	NA	65675857	65733672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65733509
transcript_9368.nnic	chr1	-	1722	6	NNC	ENSG00000117280.13	novel	1723	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	35.8942892393762	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	-8	True	NA	NA	False	NA	NA	NA	205775476	205769436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775401
transcript_93681.known	chr9	+	1662	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	521.770010519531	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	0	True	NA	NA	False	AATAAA	-16	NA	65675927	65734041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93687.nnic	chr9	+	1233	14	NIC	ENSG00000147996.17	novel	1436	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_13	529.710895806472	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	1	True	AATAAA	-18	NA	65675857	65733672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65733509
transcript_93689.known	chr9	+	1242	14	FSM	ENSG00000147996.17	ENST00000430059.6	1242	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	551.024983593647	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	8	False	NA	3	True	AATAAA	-20	NA	65675923	65733674	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93690.nic	chr9	+	1276	14	NIC	ENSG00000147996.17	novel	1436	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	554.062180091986	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	1	True	AATAAA	-18	NA	65675857	65733672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93696.known	chr9	+	1143	13	FSM	ENSG00000147996.17	ENST00000377395.8	1143	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	587.007878993119	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGCATTTATTTATTA	10	False	NA	5	True	AATAAA	-22	NA	65675937	65733676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_93699.known	chr9	+	2863	17	FSM	ENSG00000147996.17	ENST00000377392.9	2863	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	563.683740562915	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	NA	False	NA	NA	False	AATAAA	-15	NA	65675833	65734040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65704330_65704589_65708139_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_937.known	chr1	+	3480	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	241.178126887346	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	3	True	NA	24	True	TATAAA	-33	NA	16367241	16398145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
transcript_93702.known	chr9	+	894	4	FSM	ENSG00000147996.17	ENST00000377380.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	435.343797730279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTTACATTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	65675874	65682026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573
transcript_93705.known	chr9	+	1347	3	FSM	ENSG00000147996.17	ENST00000377384.5	1347	3	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_2	184	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTATTGTTTTCTCCC	NA	False	NA	NA	False	AATAAA	-42	NA	65675874	65682577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_65676131_65679165_65679253_65681573
transcript_93709.known	chr9	+	4016	5	FSM	ENSG00000274349.5	ENST00000621410.5	4016	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.27200187265877	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTTCCTAGGTATT	NA	False	NA	NA	False	AATAAA	-20	NA	66900724	66921426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_66900837_66903517_66903577_66908237_66908365_66908638_66908735_66917804
transcript_9372.known	chr1	-	1306	5	FSM	ENSG00000117280.13	ENST00000437324.6	1306	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	42.9614652915843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGGAGG	17	True	NA	NA	False	NA	NA	NA	205775451	205769702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205775272
transcript_93729.known	chr9	+	1685	15	FSM	ENSG00000196873.16	ENST00000360171.11	1685	15	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_12	381.345690567346	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTGGCTGAAGGAGTG	-1	True	NA	NA	False	AATAAA	-39	NA	68241982	68300035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_93730.nic	chr9	+	1392	15	NIC	ENSG00000196873.16	novel	2437	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_12	381.631994979243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	NA	False	NA	NA	False	AATAAA	-19	NA	68241912	68299644	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_93731.nic	chr9	+	1759	15	NIC	ENSG00000196873.16	novel	2437	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_12	381.631994979243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	NA	False	NA	NA	False	AATAAA	-15	NA	68241912	68300011	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_93745.known	chr9	+	1403	4	FSM	ENSG00000196873.16	ENST00000377349.6	1403	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	436.453383026819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTCTTTTTACCTAT	0	True	NA	NA	False	AATAAA	-14	NA	68241944	68248589	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612
transcript_93746.known	chr9	+	1736	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_2	245	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	11	False	NA	NA	False	ATTAAA	-45	NA	68241955	68249031	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68242186_68245212_68245300_68247612
transcript_93747.known	chr9	+	3115	16	FSM	ENSG00000107242.20	ENST00000265382.8	3115	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.02988833592198	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGGTACATCGATTC	-1	True	NA	3	True	AATAAA	-16	NA	68705239	69009176	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_68705763_68742500_68742658_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_68991139_68991258_69008446
transcript_93751.known	chr9	+	4806	25	FSM	ENSG00000285130.2	ENST00000642889.1	4806	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	93.4928603186123	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCAATCCGTAATTT	-22	True	NA	-7	True	AATAAA	-7	NA	69035749	69255187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69035948_69099900_69100062_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
transcript_93752.known	chr9	+	922	5	FSM	ENSG00000165060.15	ENST00000396366.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	197.010786506729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTATGCCTATACCT	-10	True	NA	93	True	NA	NA	NA	69035761	69073022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065044_69072611
transcript_93755.known	chr9	+	2632	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	207.192342200832	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	-21	True	NA	-38	True	AATAAA	-36	NA	69035750	69074850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
transcript_93757.known	chr9	+	4055	21	FSM	ENSG00000119139.21	ENST00000348208.9	4055	21	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	95.8026095677983	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	16	True	NA	7	True	AATAAA	-21	NA	69174276	69255201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69252814_69252901_69254208
transcript_93759.known	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.9462980933004	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	121	True	NA	NA	NA	69324566	69392558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
transcript_9376.known	chr1	-	1571	4	FSM	ENSG00000117280.13	ENST00000528078.1	1571	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	54.0144013718152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	8	True	NA	NA	False	NA	NA	NA	205775460	205769446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_205770454_205770732_205770855_205774832_205775087_205775272
transcript_93760.nic	chr9	-	1777	7	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	-14	131	intron_retention	TRUE	canonical	3	68	junction_1	8.13770374382247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACAAAATAGCTAGGC	-18	True	NA	NA	False	NA	NA	NA	69759973	69717889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_93761.nic	chr9	-	884	5	ISM	ENSG00000188647.13	ENST00000340434.5	10099	8	38	22407	-14	0	5prime_fragment	FALSE	canonical	3	77	junction_2	6.75925291729789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGTGCATTGGTAAAGC	-18	True	NA	22	True	AATAAA	-42	NA	69759973	69731931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_93762.known	chr9	-	1689	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTTGTGGGTACC	-4	True	NA	NA	False	ATTAAA	-17	NA	69759959	69757122	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_69758705_69759852
transcript_93768.known	chr9	+	844	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	43.1249347825594	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	5	True	NA	16	True	AATAAA	-17	NA	69820816	69906227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_93769.known	chr9	+	794	6	FSM	ENSG00000204711.9	ENST00000466872.2	794	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	56.5848036136912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	16	False	NA	16	True	AATAAA	-17	NA	69820827	69906227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69885052_69885123_69886837_69886896_69905953
transcript_93771.known	chr9	+	697	5	FSM	ENSG00000204711.9	ENST00000529446.5	697	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	12.6688594593199	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	15	False	NA	-12	True	AATGAA	-28	NA	69820826	69906199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_93772.known	chr9	+	550	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	43.058100283222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	119	False	NA	-17	True	NA	NA	NA	69820959	69858158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
transcript_93773.nic	chr9	+	625	4	NIC	ENSG00000204711.9	novel	748	5	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_3	49.0374006923967	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	0	True	NA	-12	True	AATGAA	-28	NA	69820840	69906199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_69821032_69856554_69856674_69857908_69857978_69905953
transcript_93774.known	chr9	+	502	3	FSM	ENSG00000204711.9	ENST00000495399.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGATCCTGTATT	79	False	NA	4	True	AATAAA	-15	NA	69820919	69858179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_69821032_69856554_69856674_69857908
transcript_93775.known	chr9	+	3351	14	FSM	ENSG00000165072.10	ENST00000377182.5	3351	14	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	9.00952815818543	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTAGCAATTAACTCAT	0	True	NA	10	True	AATAAA	-18	NA	70043847	70226972	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_70044232_70044583_70044698_70108210_70108483_70109719_70109805_70112994_70113133_70126158_70126416_70131518_70131613_70140144_70140289_70143553_70143820_70168701_70168796_70170478_70170632_70218336_70218597_70225749_70225835_70225967
transcript_93779.known	chr9	+	5949	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	0	0	0	0	multi-exon	FALSE	canonical	2	90	junction_11	25.1933839970382	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	10	True	NA	32	True	AATAAA	-18	NA	70258977	70354873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
transcript_93782.nic	chr9	+	2836	21	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-49	7239	-49	2960	5prime_fragment	FALSE	canonical	2	90	junction_11	25.2445538681118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGAAATAGAACAG	-39	True	NA	NA	False	AATATA	-7	NA	70258928	70347634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612
transcript_93783.nnic	chr9	+	2791	20	NIC	ENSG00000198887.9	novel	5949	25	NA	NA	-49	2960	combination_of_known_splicesites	FALSE	canonical	2	46	junction_18	36.1224448913795	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGAAATAGAACAG	-39	True	NA	NA	False	AATATA	-7	NA	70258928	70347634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70347065_70347162_70347612
transcript_93787.nic	chr9	+	2228	15	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-49	35982	-49	-25783	5prime_fragment	FALSE	canonical	2	90	junction_11	26.7821902443716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGGAGCTTCTTGAGA	-39	True	NA	NA	False	AATGAA	-12	NA	70258928	70318891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793
transcript_93797.known	chr9	-	6152	24	FSM	ENSG00000135048.14	ENST00000377044.9	6152	24	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_22	24.2718535210217	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGTGTATGTGAATT	-1	True	NA	-2	True	AATAAA	-22	NA	71768513	71683365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
transcript_93799.known	chr9	+	539	5	FSM	ENSG00000155621.15	ENST00000377027.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.049453690963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTATTAAAAGTCTG	111	False	NA	NA	False	AATGAA	-6	NA	71911801	71972843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_71911837_71918424_71918556_71947005_71947113_71971504_71971619_71972691
transcript_9380.known	chr1	-	740	5	FSM	ENSG00000196550.11	ENST00000431655.2	740	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	94.2851393380738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAATTATGATATATA	43	False	NA	NA	False	NA	NA	NA	206202827	206187280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873_206202006_206202515
transcript_93801.known	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	14.0079342596338	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	2	True	NA	15	True	AATAAA	-16	NA	71911638	71973457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
transcript_93804.known	chr9	+	902	3	FSM	ENSG00000155621.15	ENST00000479413.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	51	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAAGTCAATTTA	28	False	NA	-18	True	NA	NA	NA	71911509	71973152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_71911837_71971504_71971619_71972691
transcript_93809.known	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	340.133797203395	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	6719	False	NA	29	True	NA	NA	NA	72364626	72355832	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
transcript_93810.known	chr9	-	2096	13	FSM	ENSG00000165092.13	ENST00000297785.8	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.71825107171668	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTACTTTTGAATTT	1	True	NA	-2	True	AATAAA	-16	NA	72953053	72900670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_72901281_72905957_72906033_72909601_72909760_72911957_72912123_72916919_72917105_72918719_72918823_72924018_72924133_72925483_72925613_72927115_72927178_72928891_72929022_72930878_72931020_72940147_72940253_72952934
transcript_93811.known	chr9	+	1401	13	FSM	ENSG00000135046.14	ENST00000257497.11	1401	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	6.42207564231032	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTCATTGACTCTT	4	True	NA	16	True	AATAAA	-18	NA	73151864	73170393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328_73159424_73160262_73160377_73160802_73160894_73162781_73162862_73163475_73163533_73165115_73165210_73166096_73166193_73167496_73167556_73169031_73169155_73170050
transcript_93812.known	chr9	+	9581	10	FSM	ENSG00000198963.11	ENST00000376896.8	9581	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	4.33190859769287	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTAATGGTTTTCT	-3	True	NA	NA	False	ATTAAA	-18	NA	74497334	74693177	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_74497984_74630281_74630368_74634630_74634773_74642413_74642816_74660616_74660739_74662473_74662607_74665487_74665596_74667790_74667902_74671788_74671902_74685462
transcript_93813.known	chr9	-	2351	2	FSM	ENSG00000135045.7	ENST00000376854.6	2351	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTGTTTATTGTCAA	0	True	NA	-18	True	AATAAA	-15	NA	74952912	74946582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_74948207_74952185
transcript_93822.known	chr9	-	2050	10	FSM	ENSG00000106733.21	ENST00000376811.5	2050	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	35.973584272798	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATCTTTTTTTTATATA	-22	True	NA	NA	False	AATAAA	-19	NA	75088190	75060572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078583_75083086_75083151_75088007
transcript_93826.nnic	chr9	-	1506	10	NNC	ENSG00000106733.21	novel	2050	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	33.5625452617117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	667	False	NA	-1	True	AATAAA	-19	NA	75088244	75061199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078612_75083086_75083151_75088007
transcript_93832.known	chr9	-	1754	9	FSM	ENSG00000106733.21	ENST00000361092.9	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	19.2272592950738	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCAATCTTTTTTTTA	13	True	NA	NA	False	AATAAA	-15	NA	75088155	75060576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_93836.known	chr9	-	1121	8	FSM	ENSG00000106733.21	ENST00000376808.8	1121	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	34.0731506003882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	4	True	NA	-1	True	AATAAA	-19	NA	75088217	75061199	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_9384.known	chr1	-	2364	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	47.7656315310031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	31	False	NA	NA	False	AATAAA	-20	NA	206202839	206186178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
transcript_93840.known	chr9	-	1903	7	FSM	ENSG00000106733.21	ENST00000494066.1	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	20.6128331116537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGTGGAATTCATTG	12	True	NA	-3	True	AATAAA	-17	NA	75088209	75061201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75061568_75066756_75066841_75068995_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_93843.known	chr9	-	603	2	FSM	ENSG00000106733.21	ENST00000466137.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGGTATACAGAACACC	1100	False	NA	NA	False	NA	NA	NA	75087811	75082708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75083151_75087650
transcript_93844.known	chr9	-	453	2	FSM	ENSG00000106733.21	ENST00000490321.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCCGTAAAATTT	776	False	NA	67	True	AATATA	-38	NA	75088135	75087543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_75087869_75088007
transcript_93845.known	chr9	+	1348	10	FSM	ENSG00000134996.12	ENST00000346234.7	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	19.5946578761649	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTTATTTTTT	-17	True	NA	99	True	AGTAAA	-18	NA	75088513	75147265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_93849.nnic	chr9	+	1239	9	NIC	ENSG00000134996.12	novel	1348	10	NA	NA	-5	-67	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	61.4567937660272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTGTCCGTTTCTGT	-22	True	NA	32	True	AATAAA	-18	NA	75088508	75147198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_75088727_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_93850.known	chr9	-	2596	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	12.675435561221	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-9	True	NA	-10	True	AATAAA	-17	NA	76394426	76385525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
transcript_93856.known	chr9	+	5566	4	FSM	ENSG00000187210.14	ENST00000376730.5	5566	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	87.4922218765125	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTCTGCAGAAATTT	-16	True	NA	11	True	ATTAAA	-21	NA	76459181	76507416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_76459306_76460059_76460178_76500915_76501062_76502238
transcript_9386.known	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	80.3008232972877	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	424	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
transcript_93863.known	chr9	+	461	3	FSM	ENSG00000187210.14	ENST00000480311.5	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	53.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTTTTAAGGATTCATCAA	24	True	NA	NA	False	NA	NA	NA	76459221	76502469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_76459306_76500915_76501062_76502238
transcript_93867.nic	chr9	-	2204	10	NIC	ENSG00000106772.19	novel	7434	11	NA	NA	-4	598	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	9.33862283975586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACAAACTTGTTTTTG	-8	True	NA	NA	False	AATAAA	-17	NA	76692204	76613409	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_76614601_76629191_76629291_76636470_76636558_76637417_76637550_76638185_76638289_76641971_76641981_76644738_76644910_76652482_76652684_76655422_76655503_76692073
transcript_93870.known	chr9	-	1264	6	FSM	ENSG00000106772.19	ENST00000492157.5	1264	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.00665927567458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGCAAGTTGTCT	219	False	NA	NA	False	AAAAAG	-7	NA	76906087	76823247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
transcript_93873.known	chr9	-	2497	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.40947204913349	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	-5	True	NA	-2	True	AATATA	-15	NA	77648322	77423078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
transcript_93875.nic	chr9	+	2701	7	NIC	ENSG00000148019.14	novel	2626	16	NA	NA	-1502	0	intron_retention	FALSE	canonical	3	96	junction_6	68.3885955404847	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGTCTTAAAATATAG	NA	False	NA	31	True	AATAAA	-25	NA	78251804	78267075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
transcript_93882.known	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1479	junction_7	107.242715370322	2190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	-2	True	NA	15	True	ATTAAA	-17	NA	78297124	78330093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
transcript_93883.known	chr9	+	4886	20	FSM	ENSG00000106829.20	ENST00000376552.8	4886	20	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_16	29.4601472672543	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTGGGTTTTTTTCAC	-6	True	NA	NA	False	AGTAAA	-22	NA	79571964	79726882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
transcript_93885.known	chr9	-	4135	20	FSM	ENSG00000196781.16	ENST00000376499.8	4135	20	0	0	0	0	multi-exon	TRUE	canonical	3	382	junction_8	95.8684463354345	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-2	True	NA	79	True	AGTAAA	-18	NA	81689547	81583682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_93886.known	chr9	-	1115	6	FSM	ENSG00000196781.16	ENST00000376463.3	1115	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	116.324374058062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	2253	False	NA	-2	True	AATAAA	-18	NA	81687368	81633468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333
transcript_93887.nnic	chr9	-	1447	4	NIC	ENSG00000196781.16	novel	1115	6	NA	NA	-471	-1	combination_of_known_splicesites	TRUE	canonical	3	24	junction_1	326.211928387394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGGCTTGTGTTCTAA	1782	False	NA	-3	True	AATAAA	-17	NA	81687839	81633469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_81634302_81685675_81685721_81685832_81685897_81687333
transcript_93891.known	chr9	+	936	5	FSM	ENSG00000148057.16	ENST00000376419.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.1650635094611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATTCCCTGGAAATT	10	True	NA	1	True	AATAAA	-16	NA	83623142	83644123	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83623222_83628180_83628212_83628872_83628960_83641547_83641592_83643428
transcript_93892.known	chr9	+	629	4	FSM	ENSG00000148057.16	ENST00000405990.3	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.11805216802087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATGTTTCTAAAGGC	33	False	NA	NA	False	NA	NA	NA	83623165	83643870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83623222_83628872_83628960_83641547_83641592_83643428
transcript_93893.known	chr9	+	1017	2	FSM	ENSG00000254473.2	ENST00000531661.2	1175	2	40	118	40	-118	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAACGCTTCCACAACC	19	True	NA	NA	False	NA	NA	NA	83708317	83713378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83708454_83712497
transcript_93894.known	chr9	-	1801	13	FSM	ENSG00000165113.13	ENST00000376371.7	1801	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	11.722189310117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	-11	True	NA	-4	True	AATAAA	-18	NA	83817769	83739424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83768817_83768971_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_93895.known	chr9	-	1511	12	FSM	ENSG00000165113.13	ENST00000376365.7	1511	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	11.1473971316141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	182	False	NA	-4	True	AATAAA	-18	NA	83817632	83739424	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_93899.nic	chr9	-	2833	11	ISM	ENSG00000165115.15	ENST00000334204.6	4400	16	-71	43662	-71	-242	5prime_fragment	FALSE	canonical	3	18	junction_10	5.04083326445142	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAATGAAAAAAGGAA	-14	True	NA	-61	True	AAGAAA	-8	NA	83921536	83880359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_83880495_83883812_83884019_83887040_83887197_83888488_83888593_83889083_83889254_83891294_83891502_83899660_83899805_83903059_83904019_83908451_83908653_83915293_83915679_83921370
transcript_93901.nnic	chr9	-	1981	6	NNC	ENSG00000165115.15	novel	4400	16	NA	NA	-91	-966	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	10.8517279730004	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTTTCTTAATGCATCT	NA	False	NA	NA	False	AATAGA	-6	NA	83921556	83899661	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_83899805_83903059_83904019_83908451_83908653_83915293_83915679_83920105_83920213_83921370
transcript_93904.nnic	chr9	-	575	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-91	-20836	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	11	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTTACTTAATG	NA	False	NA	1	True	AATAAA	-17	NA	83921556	83919531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_83919814_83920105_83920213_83921370
transcript_9391.known	chr1	+	2493	21	FSM	ENSG00000263528.8	ENST00000578328.6	2493	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	7.98999374217527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	9	True	NA	NA	False	NA	NA	NA	206470494	206496274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493919_206493992_206496111
transcript_93914.known	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	TRUE	canonical	3	5885	junction_16	1019.9985294107	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	7	True	NA	-6	True	AATATA	-14	NA	83980604	83968082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_9392.known	chr1	+	678	5	FSM	ENSG00000263528.8	ENST00000579827.6	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.12372435695795	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATGTTCACAGCAGCA	156	False	NA	5	True	ATTAAA	-17	NA	206470641	206475135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864
transcript_93934.nic	chr9	-	2113	17	NIC	ENSG00000165119.21	novel	2038	17	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	5714	junction_1	1162.56171207166	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	NA	False	NA	-12	True	AATAAA	-14	NA	83980675	83968908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_93941.nnic	chr9	-	2050	17	NNC	ENSG00000165119.21	novel	2889	17	NA	NA	540	0	at_least_one_novel_splicesite	FALSE	canonical	3	595	junction_16	2095.64691309748	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	961	False	NA	-12	True	AATAAA	-14	NA	83979650	83968908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83979600
transcript_93972.nic	chr9	-	2101	16	NIC	ENSG00000165119.21	novel	2928	17	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	1293	junction_9	2078.78207505153	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	NA	False	NA	-12	True	AATAAA	-14	NA	83980675	83968908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_93979.known	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3360	junction_16	1493.64121858087	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-3	True	NA	-6	True	AATATA	-14	NA	83980215	83968082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_93980.known	chr9	-	2038	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	0	0	0	multi-exon	FALSE	canonical	3	3360	junction_16	1587.19707616721	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	361	False	NA	-12	True	AATAAA	-14	NA	83980250	83968908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_93983.nnic	chr9	+	3414	4	NNC	ENSG00000178966.17	novel	3300	3	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	130.110209694192	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	-35	True	NA	89	True	ATTAAA	-21	NA	83980766	84004074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_83980892_83988328_83988405_83999708_83999798_84000950
transcript_93984.known	chr9	+	3420	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	122.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	-4	True	NA	89	True	ATTAAA	-21	NA	83980797	84004074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83981005_83999708_83999798_84000950
transcript_93986.known	chr9	+	3300	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	46.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	3	True	NA	89	True	ATTAAA	-21	NA	83980804	84004074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_83980892_83999708_83999798_84000950
transcript_93989.known	chr9	-	4464	26	FSM	ENSG00000135049.16	ENST00000357081.8	4464	26	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_16	29.2173646997808	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTCATCTTCTTT	-23	True	NA	-3	True	AATAAA	-20	NA	85741954	85546538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
transcript_93993.known	chr9	+	5813	23	FSM	ENSG00000135040.16	ENST00000361671.10	5813	23	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35.1589366512453	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATCATAAAATGCAAG	-8	True	NA	NA	False	NA	NA	NA	85941145	86025462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_93995.nnic	chr9	+	2657	23	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	88	-3164	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	61.5430374172859	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTGCTGGAGATGAAAA	-16	True	NA	17	True	AATAAA	-20	NA	85941269	86022298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_85941406_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_94.known	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_2	37.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_-_8976_9189_9299_9434
transcript_940.known	chr1	+	892	4	FSM	ENSG00000055070.17	ENST00000471507.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	262.689085337696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGGGGGACCCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	16367087	16395406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16391374_16391425_16393230_16393483_16395037
transcript_9400.known	chr1	-	2011	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_11	21.3369469728555	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-7	True	NA	-4	True	AATAAA	-19	NA	206612465	206591641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_94001.nic	chr9	+	1859	18	ISM	ENSG00000135040.16	ENST00000361671.10	5813	23	-26	8792	-26	-8792	5prime_fragment	TRUE	canonical	3	210	junction_1	36.333042336115	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGCTGTGGATTATT	NA	False	NA	NA	False	AGTAAA	-18	NA	85941119	86016670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_94003.nnic	chr9	+	1965	18	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	0	-8792	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	67.5122954327734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGCTGTGGATTATT	-8	True	NA	NA	False	AGTAAA	-18	NA	85941145	86016670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_85941406_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_94010.known	chr9	-	3046	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_3	95.3272466329395	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-10	True	NA	52	True	AATAAA	-18	NA	86099558	86026145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
transcript_94011.known	chr9	-	3022	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	393.445401486175	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTCACAGCTCT	-7	True	NA	51	True	AATAAA	-17	NA	86100149	86026146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
transcript_94016.known	chr9	-	813	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	175.307349151901	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGACAGGACATCGTG	438	False	NA	81	True	NA	NA	NA	86282108	86265678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
transcript_94017.known	chr9	-	1967	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_3	20.5318181259127	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	8	True	NA	NA	False	ATTAAA	-30	NA	86282538	86264545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
transcript_94021.known	chr9	-	5603	27	FSM	ENSG00000083223.18	ENST00000375963.8	5603	27	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	10.4861842045425	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-6	True	NA	-8	True	AATAAA	-21	NA	86354410	86287732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_94023.nic	chr9	-	2440	13	ISM	ENSG00000083223.18	ENST00000375963.8	5603	27	-27	35775	17	120	5prime_fragment	FALSE	canonical	3	56	junction_1	10.7273663538116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAACGAGAAAGAGAAA	28	True	NA	NA	False	GATAAA	-23	NA	86354437	86323507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_94025.nic	chr9	-	1799	10	ISM	ENSG00000083223.18	ENST00000277141.10	5724	28	-90	49603	-46	-457	5prime_fragment	FALSE	canonical	3	69	junction_2	7.05708644808907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCTAACCAGAACTGAC	-35	True	NA	-7	True	ATTAAA	-23	NA	86354500	86337335	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_94026.nic	chr9	-	1614	8	ISM	ENSG00000083223.18	ENST00000277141.10	5724	28	-23	52091	21	-2945	5prime_fragment	FALSE	canonical	3	80	junction_6	4.1057451037714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAAGGAAGTATTTCG	32	True	NA	NA	False	AATAAA	-19	NA	86354433	86339823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_94027.known	chr9	-	2245	2	FSM	ENSG00000269994.3	ENST00000669870.1	2245	2	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTACTTTTTATCCA	NA	False	NA	-34	True	AATAGA	-5	NA	87042419	87008514	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_87010211_87041870
transcript_94028.known	chr9	+	579	2	FSM	ENSG00000196730.13	ENST00000470267.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGCACAGTATATTGAT	1	True	NA	NA	False	NA	NA	NA	87497911	87499352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87498108_87498969
transcript_94029.known	chr9	+	1613	9	FSM	ENSG00000135047.16	ENST00000677262.1	1613	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	135.209501792589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	0	True	NA	22	True	AATAAA	-18	NA	87726118	87731393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726399_87727360_87727396_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94030.known	chr9	+	1719	9	FSM	ENSG00000135047.16	ENST00000677821.1	1719	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	134.783564929111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	3464	False	NA	22	True	AATAAA	-18	NA	87726085	87731393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726399_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94031.known	chr9	+	1555	8	FSM	ENSG00000135047.16	ENST00000677955.1	1555	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	122.403147885358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAATTTTTACCTGTT	47	False	NA	-23	True	TTTAAA	-5	NA	87726165	87731348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726399_87727593_87727730_87727957_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94032.known	chr9	+	1654	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	80.8326565649487	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	0	True	NA	13	True	AATAAA	-27	NA	87726118	87731469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94035.known	chr9	+	1813	8	FSM	ENSG00000135047.16	ENST00000676531.1	1813	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	104.250874806685	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	3113	False	NA	22	True	AATAAA	-18	NA	87725734	87731393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726250_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94036.known	chr9	+	2129	8	FSM	ENSG00000135047.16	ENST00000679149.1	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	82.1787499222002	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	2929	False	NA	10	True	AATAAA	-24	NA	87725550	87731466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726309_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94038.known	chr9	+	1315	7	FSM	ENSG00000135047.16	ENST00000342020.6	1315	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	118.741198504235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	0	True	NA	22	True	AATAAA	-18	NA	87726118	87731393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726254_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87731007
transcript_94040.known	chr9	+	1373	7	FSM	ENSG00000135047.16	ENST00000677864.1	1373	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	115.336343891343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	0	True	NA	13	True	AATAAA	-27	NA	87726118	87731469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726254_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94041.known	chr9	+	1593	9	FSM	ENSG00000135047.16	ENST00000676881.1	1593	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.568523436946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	3	True	NA	22	True	AATAAA	-18	NA	87726121	87731393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726309_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94042.known	chr9	+	1536	9	FSM	ENSG00000135047.16	ENST00000340342.11	1536	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.568523436946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTGGGGCTTCTTTCT	3	True	NA	20	True	AATAAA	-16	NA	87726121	87731391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_87726254_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_94045.known	chr9	-	2149	8	FSM	ENSG00000156345.18	ENST00000325303.9	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	18.0611207191761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	10	True	NA	NA	False	AATAAA	-29	NA	87974533	87966440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970631_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_94046.known	chr9	-	1860	7	FSM	ENSG00000156345.18	ENST00000605159.5	1860	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	24.7431247465275	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	187	False	NA	0	True	AATAAA	-17	NA	87974505	87966610	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_87967632_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_94047.nnic	chr9	-	1591	2	FSM	ENSG00000287750.2	ENST00000692550.1	484	2	-3	-1104	-3	-6	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTATTGTCTGTGCC	21	False	NA	-8	True	GATAAA	-13	NA	88077862	88065330	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_88066782_88077722
transcript_94048.nnic	chr9	-	483	2	FSM	ENSG00000287750.2	ENST00000692550.1	484	2	-3	4	-3	-4	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCTGTAATAATTCCT	21	False	NA	NA	False	AATAAA	-13	NA	88077862	88066438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_88066782_88077722
transcript_94050.known	chr9	+	4459	6	FSM	ENSG00000106723.17	ENST00000375859.4	4459	6	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_4	104.09149821191	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	30	True	NA	28	True	AATAAA	-15	NA	88388443	88478694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_94052.known	chr9	+	706	5	FSM	ENSG00000106723.17	ENST00000485565.6	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	309.493134011079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCGTCTATTTCATC	38	True	NA	NA	False	NA	NA	NA	88388451	88475203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88468371_88468606_88475077
transcript_94056.known	chr9	-	585	3	FSM	ENSG00000224945.1	ENST00000429700.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCACGGCCTCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	89109934	89088886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_89088936_89109047_89109129_89109479
transcript_94058.known	chr9	+	616	3	FSM	ENSG00000123975.5	ENST00000314355.7	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	4605	junction_1	92	3244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCAAGTTTTTGA	-2	True	NA	26	True	AATAAA	-19	NA	89311194	89316703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89311352_89315169_89315298_89316372
transcript_94062.known	chr9	+	3481	17	FSM	ENSG00000187742.15	ENST00000375807.8	3481	17	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	59.2338783446602	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTCTCAGTGGTC	-18	True	NA	37	True	AATAAA	-36	NA	89318499	89359663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_94065.nic	chr9	+	3356	17	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_6	65.9004635321331	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	16	False	NA	16	True	AATAAA	-15	NA	89318489	89359642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_94066.known	chr9	+	3320	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	76.7242424205023	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	1	True	NA	16	True	AATAAA	-15	NA	89318518	89359642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_94068.known	chr9	+	3584	17	FSM	ENSG00000187742.15	ENST00000534113.6	3584	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	91.9183571165194	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGCTTCTCAGTGGT	23	False	NA	36	True	AATAAA	-35	NA	89318850	89359662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_9407.nnic	chr1	-	1913	14	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	47.6862279003167	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	33	False	NA	-4	True	AATAAA	-19	NA	206612517	206591641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_94070.nnic	chr9	+	3106	16	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	98.363859668523	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	16	False	NA	16	True	AATAAA	-15	NA	89318489	89359642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_89318613_89319651_89319798_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_94073.nic	chr9	+	1115	8	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_6	71.3971359398132	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	16	False	NA	NA	False	AAGAAA	-4	NA	89318489	89338510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_94074.nic	chr9	+	1108	8	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-29	21132	-10	0	5prime_fragment	FALSE	canonical	3	89	junction_2	86.765459129536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	16	False	NA	NA	False	AAGAAA	-4	NA	89318489	89338510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_94075.nic	chr9	+	994	8	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_2	94.0234447532386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	16	False	NA	NA	False	AAGAAA	-4	NA	89318489	89338510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_94076.nic	chr9	+	1359	8	ISM	ENSG00000187742.15	ENST00000534113.6	3584	17	-36	21152	-36	0	5prime_fragment	FALSE	canonical	3	14	junction_1	106.270544232297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	-13	True	NA	NA	False	AAGAAA	-4	NA	89318814	89338510	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_94078.nic	chr9	+	843	2	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-29	39271	-10	-10074	5prime_fragment	FALSE	canonical	3	289	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCCCGTTTCAA	16	False	NA	NA	False	NA	NA	NA	89318489	89320371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_89318613_89319651
transcript_94084.known	chr9	+	822	2	FSM	ENSG00000237372.4	ENST00000444374.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGCGGAGGCAAGCTG	-7	True	NA	NA	False	NA	NA	NA	89701650	89719670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_89701989_89719186
transcript_94086.known	chr9	-	1096	3	FSM	ENSG00000231107.2	ENST00000425666.2	1096	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCACATTCCCTCTGCCT	NA	False	NA	-17	True	AATAAA	-26	NA	90433566	90300895	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_90301654_90383519_90383722_90433430
transcript_94087.known	chr9	-	1574	10	FSM	ENSG00000148090.12	ENST00000375731.9	1574	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	21.5721585542884	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAATTTTTCTCTTAC	-8	True	NA	-23	True	AATAAA	-17	NA	91361918	91213822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91361627
transcript_94088.known	chr9	-	2993	13	FSM	ENSG00000169071.15	ENST00000375715.5	2993	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	69.5473459833899	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGTTTTCAAGATTAAG	3613	False	NA	NA	False	AATAAA	-17	NA	91948880	91563090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_91563330_91694319_91694412_91717306_91717397_91722525_91722581_91724153_91725108_91726540_91726744_91730909_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91948606
transcript_9409.known	chr1	-	1633	13	FSM	ENSG00000143486.16	ENST00000367114.7	1633	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	55.2981816056269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-1	True	NA	-4	True	AATAAA	-19	NA	206612459	206591641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_94090.known	chr9	-	2783	15	FSM	ENSG00000090054.16	ENST00000262554.7	2783	15	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_4	47.4012937910056	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGTCTATTTGCATAT	-9	True	NA	-11	True	AATAAA	-14	NA	92115413	92031146	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_94091.known	chr9	-	946	6	FSM	ENSG00000090054.16	ENST00000337841.4	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	238.828306530026	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTGGAAATAGCAT	60	False	NA	NA	False	AATAAA	-27	NA	92115383	92079060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_94093.known	chr9	-	4587	35	FSM	ENSG00000196305.19	ENST00000447699.7	4587	35	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	447.38442864009	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCCAGGTGATAATTT	5126	False	NA	-7	True	AATAAA	-11	NA	92293756	92210210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240642_92240692_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_94095.known	chr9	-	4535	35	FSM	ENSG00000196305.19	ENST00000683565.1	4535	35	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_33	473.404996443256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	5	True	NA	-34	True	CATAAA	-33	NA	92293693	92210237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92290835_92290923_92293610
transcript_94096.known	chr9	-	4443	34	FSM	ENSG00000196305.19	ENST00000683679.1	4443	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	436.012605019095	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	9	True	NA	-21	True	AATAAA	-8	NA	92293689	92210348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_94097.known	chr9	-	4300	34	FSM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	401.350756511142	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	5166	False	92293733	-21	True	AATAAA	-8	NA	92293716	92210348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_94099.known	chr9	-	4656	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_33	354.916079269664	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	-2	True	NA	-3	True	AATAAA	-15	NA	92293700	92210206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_94100.known	chr9	-	4455	34	FSM	ENSG00000196305.19	ENST00000684542.1	4455	34	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	411.211549540703	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACTAGACATCTAATAAAA	3	True	NA	-36	True	CATAAA	-31	NA	92293695	92210239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269877_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_94101.known	chr9	-	4186	33	FSM	ENSG00000196305.19	ENST00000627121.3	4186	33	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_31	418.702197598051	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	3	True	NA	-17	True	AATAAA	-12	NA	92293695	92210344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92289300_92289427_92293610
transcript_94113.nic	chr9	-	2606	20	ISM	ENSG00000196305.19	ENST00000683469.1	4300	34	-18	45993	0	-15579	5prime_fragment	FALSE	canonical	3	1054	junction_19	119.491049051065	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGGCCATGGAGGCG	-1	True	NA	NA	False	AATATA	-19	NA	92293734	92256341	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_94127.nnic	chr9	-	2054	14	NNC	ENSG00000196305.19	novel	4186	33	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	545.245539390147	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-15	True	NA	-17	True	AATAAA	-12	NA	92293713	92210344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251815_92293610
transcript_94129.nnic	chr9	-	1975	13	NIC	ENSG00000196305.19	novel	4186	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_12	526.661042955207	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	5166	False	92293733	-17	True	AATAAA	-12	NA	92293716	92210344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92293610
transcript_94137.known	chr9	-	4075	17	FSM	ENSG00000198000.12	ENST00000442668.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	47.7951357357629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	-1	True	NA	-1	True	GATAAA	-24	NA	92325350	92297357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_94142.known	chr9	-	3136	13	FSM	ENSG00000198000.12	ENST00000432670.6	3136	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	48.2378366937085	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACGAAAAAAGAAAAGGG	-9	True	NA	NA	False	AGTAAA	-3	NA	92325358	92301816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
transcript_94151.known	chr9	-	1098	7	FSM	ENSG00000198000.12	ENST00000421075.6	1098	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.9413544959374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCCATTACTCCTT	0	True	NA	NA	False	AATAGA	-43	NA	92325594	92315851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
transcript_94154.known	chr9	-	599	3	FSM	ENSG00000198000.12	ENST00000535649.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCCCCTCAGTCTGATC	-1	True	NA	NA	False	NA	NA	NA	92325350	92323136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92323504_92324022_92324210_92325305
transcript_94156.known	chr9	-	4268	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	14.0185888495716	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCATCCTCCACGTT	12	True	NA	NA	False	AATAAA	-21	NA	92670131	92613182	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
transcript_94157.known	chr9	-	4784	5	FSM	ENSG00000127081.14	ENST00000375495.8	4784	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8.52569645248997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGTCTGGATAATAT	2	True	NA	NA	False	ATTAAA	-14	NA	92878038	92844181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92875014_92875060_92877889
transcript_94159.known	chr9	-	2836	4	FSM	ENSG00000127081.14	ENST00000332591.6	2836	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	10.7082522694727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCAGTCTTTCTTGTTTC	18	True	NA	-11	True	AGTAAA	-16	NA	92878022	92846068	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877889
transcript_94161.known	chr9	+	857	6	FSM	ENSG00000165233.18	ENST00000375464.7	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	47.0463601142533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	-28	True	NA	11	True	ATTAAA	-17	NA	93096216	93113283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_94162.known	chr9	+	759	6	FSM	ENSG00000165233.18	ENST00000490488.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	57.1895095275349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	8	False	NA	0	True	ATTAAA	-6	NA	93096314	93113272	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_94163.known	chr9	+	660	5	FSM	ENSG00000165233.18	ENST00000468781.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	94.0132969318702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATAATTTGTGTAA	33	True	NA	27	True	NA	NA	NA	93096277	93113207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93112217_93112290_93112991
transcript_94166.known	chr9	-	1237	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	16.8193010820572	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATCTCCCTGTTCCC	-4	True	NA	-28	True	AATAAA	-25	NA	93134251	93121495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
transcript_94169.known	chr9	-	1154	5	FSM	ENSG00000204352.4	ENST00000648864.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	24.6513184231594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGCAAATGAAACCT	213	False	NA	NA	False	AATAAA	-17	NA	93346414	93318198	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073
transcript_9417.known	chr1	+	8128	3	FSM	ENSG00000143479.18	ENST00000367109.8	8128	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGCATCCTGATTGT	-9	True	NA	17	True	AATAAA	-19	NA	206635535	206655158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_206635781_206637649_206637762_206647387
transcript_94171.known	chr9	-	467	3	FSM	ENSG00000204352.4	ENST00000649569.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGTGCGTGGGTCGC	475	False	NA	NA	False	NA	NA	NA	93346152	93335373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93335661_93335875_93335977_93346073
transcript_94173.nic	chr9	-	1659	4	NIC	ENSG00000188938.17	novel	1553	4	NA	NA	-775	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	126.093439780012	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAAGTGAGTTTTTTT	1210	False	NA	-17	True	AGTAAA	-21	NA	93452363	93446497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_93447698_93448368_93448490_93450478_93450600_93452146
transcript_94174.known	chr9	-	5922	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-8	True	NA	-25	True	AATAAA	-16	NA	93453581	93443331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_93447698_93450478_93450600_93452146
transcript_94177.known	chr9	+	2374	5	FSM	ENSG00000175787.17	ENST00000395395.7	2374	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.68954408012983	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACAGTCACACTACACA	-14	True	NA	NA	False	NA	NA	NA	94259297	94301829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94259346_94278757_94278846_94292340_94292468_94292973_94293070_94299814
transcript_94180.known	chr9	+	509	2	FSM	ENSG00000269929.4	ENST00000660581.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCGGTTTCGGGTATTT	12	True	NA	NA	False	AATAAA	-17	NA	94166289	94200902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94166382_94200485
transcript_94181.nic	chr9	-	1270	7	NIC	ENSG00000165140.12	novel	1487	8	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	3.53160335006952	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	67	False	NA	NA	False	AATAAA	-22	NA	94640218	94603132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94640043
transcript_94182.known	chr9	+	1164	3	FSM	ENSG00000231806.4	ENST00000452148.3	1193	3	15	14	-14	-14	multi-exon	FALSE	canonical	2	10	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTGTG	-13	True	NA	NA	False	NA	NA	NA	94555068	94568127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94555311_94558968_94559153_94567389
transcript_94184.known	chr9	+	3974	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	1	True	NA	NA	False	AATAAA	-3	NA	94555082	94570916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94555346_94558968_94559153_94567389
transcript_94188.known	chr9	+	2820	15	FSM	ENSG00000148120.18	ENST00000297979.9	2820	15	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_5	13.2603444409969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	14	True	NA	16	True	AATAAA	-23	NA	94726711	95087159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_9419.known	chr1	+	3091	10	FSM	ENSG00000162889.11	ENST00000367103.4	3091	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	5.71115434484284	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTTTTCTTTCTCTTT	-11	True	NA	21	True	ACTAAA	-15	NA	206684904	206734281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_206685509_206728709_206728850_206729034_206729100_206729395_206729476_206729971_206730099_206730687_206730764_206731137_206731263_206731639_206731726_206731838_206731920_206732574
transcript_94190.nic	chr9	+	1080	7	NIC	ENSG00000148120.18	novel	919	6	NA	NA	255	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	13.8373488147919	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	5	True	NA	16	True	AATAAA	-23	NA	95004171	95087159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_94191.nic	chr9	+	935	6	NIC	ENSG00000148120.18	novel	919	6	NA	NA	255	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.3052437937981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	5	True	NA	16	True	AATAAA	-23	NA	95004171	95087159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_94194.known	chr9	-	2387	14	FSM	ENSG00000158169.13	ENST00000490972.7	2387	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	13.9402783669031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCACGTATGTATTTGA	33	False	NA	NA	False	AATAAA	-18	NA	95317671	95110511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95111346_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_94196.nic	chr9	-	2696	4	ISM	ENSG00000158169.13	ENST00000474949.1	841	7	0	67444	0	-3888	5prime_fragment	FALSE	canonical	3	48	junction_2	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGCCAGAGATA	-5	True	NA	NA	False	AAAAAG	-8	NA	95317709	95238559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_95240744_95247431_95247517_95249126_95249370_95317525
transcript_94197.known	chr9	-	1404	2	FSM	ENSG00000158169.13	ENST00000433644.2	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTATTCTT	29	False	NA	-6	True	AATAAA	-18	NA	95426796	95414833	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95416165_95426723
transcript_94198.known	chr9	-	4592	15	FSM	ENSG00000158169.13	ENST00000289081.8	4592	15	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	8.81441305765849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	-5	True	NA	0	True	AATAAA	-19	NA	95317709	95099053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_94199.known	chr9	+	476	1	FSM	ENSG00000271659.1	ENST00000604650.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTCTTTCTTTCATA	4596	False	NA	NA	False	AGTAAA	-15	NA	95514044	95514520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_95514000_95514500
transcript_942.known	chr1	+	3447	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	237	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	58	False	NA	24	True	TATAAA	-33	NA	16367224	16398145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16393227_16393483_16395037
transcript_9420.known	chr1	-	5501	4	FSM	ENSG00000182795.13	ENST00000359470.6	5501	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGTCTTATTTTTTT	7	True	NA	-2	True	AATAAA	-13	NA	207032756	207018521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_207023481_207024886_207025065_207027493_207027680_207032578
transcript_94202.known	chr9	-	962	2	FSM	ENSG00000175611.13	ENST00000670189.2	1384	2	422	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTTAAAGAGTAATT	-18	True	NA	NA	False	AATAAA	-13	NA	95875587	95870087	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_95870442_95874979
transcript_94205.nic	chr9	+	3009	16	ISM	ENSG00000182150.19	ENST00000683350.1	4826	18	-32	8320	-4	0	5prime_fragment	FALSE	canonical	3	43	junction_3	11.2178429299041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCAAGTCTGACGAGAA	-4	True	NA	NA	False	TATAAA	-28	NA	95875651	95972373	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971932
transcript_94206.known	chr9	+	2186	2	FSM	ENSG00000182150.19	ENST00000665077.3	2186	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAAATAATGCTACTGT	18	False	NA	NA	False	AAAAAG	-16	NA	95875707	95882677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_95876085_95880868
transcript_94207.known	chr9	-	654	1	FSM	ENSG00000286835.1	ENST00000658405.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTGTAATGAATGAAT	1086	False	NA	NA	False	AATAAA	-14	NA	96417377	96416723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96416700_96417400
transcript_94209.known	chr9	-	2965	14	FSM	ENSG00000081377.17	ENST00000375242.7	2965	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	69.2411103387774	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	96567254	96502611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96503790_96509672_96509790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96566767
transcript_9421.known	chr1	+	3494	15	FSM	ENSG00000123836.15	ENST00000367079.3	3494	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	10.2807527716126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAATTAATTTTTAAG	45	False	NA	NA	False	AATAAA	-16	NA	207053310	207081024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207078953
transcript_94211.known	chr9	+	2651	8	FSM	ENSG00000130956.14	ENST00000375249.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	16.3445054113869	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGTAGAGAAAACAGT	-19	True	NA	15	True	AATAAA	-20	NA	96450168	96491336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96471010_96471095_96484461_96484634_96488088_96488275_96489981
transcript_94212.known	chr9	-	2723	6	FSM	ENSG00000158122.12	ENST00000446045.1	2723	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	19.9037684873996	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	0	True	NA	NA	False	AATAAA	-21	NA	96655303	96639576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655251
transcript_94213.known	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	11.2712022428843	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-8	True	NA	-3	True	AATAAA	-20	NA	96778087	96754552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
transcript_94220.known	chr9	+	1299	3	FSM	ENSG00000224848.3	ENST00000661289.2	1301	3	2	0	2	0	multi-exon	FALSE	canonical	3	16	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAACTGTATTAATAA	-3	True	NA	NA	False	AATAAA	-2	NA	96687049	96774318	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96687325_96720965_96721131_96773459
transcript_94221.known	chr9	+	2485	2	FSM	ENSG00000224848.3	ENST00000659200.1	2485	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGCCCAGATTATTTT	7	True	NA	NA	False	NA	NA	NA	96687059	96723185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96687325_96720965
transcript_94222.known	chr9	+	774	3	FSM	ENSG00000224848.3	ENST00000656729.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	2	True	NA	6	True	AATAAA	-14	NA	96687054	96773977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_96687146_96720965_96721131_96773459
transcript_94224.known	chr9	-	4497	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	890.940505519308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-1	True	NA	2	True	AGTAAA	-19	NA	97039142	97029676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
transcript_94227.known	chr9	-	4481	8	FSM	ENSG00000136943.12	ENST00000680385.1	4481	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	753.603506426263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-1	True	NA	2	True	AGTAAA	-19	NA	97039142	97029676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036400_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_94228.known	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	706.695269604681	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	1	True	NA	-26	True	AATAAA	-19	NA	97039140	97032654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
transcript_94229.known	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	2	154	junction_4	710.677141886525	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	2	True	NA	-26	True	AATAAA	-19	NA	97039139	97032654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_94236.known	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	169.532363347599	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	483	False	NA	-26	True	AATAAA	-19	NA	97039174	97032654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
transcript_94237.known	chr9	-	4172	7	FSM	ENSG00000136943.12	ENST00000538255.6	4172	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	821.841107243703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	555	False	NA	2	True	AGTAAA	-19	NA	97039102	97029676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037492_97037616_97037917_97038054_97039070
transcript_9424.known	chr1	-	6396	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTATATTTTGGGA	0	True	NA	-10	True	AATAAA	-15	NA	207051208	207043848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_207049724_207050687
transcript_94243.known	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	185.675415712474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	2	True	NA	29	True	AAAAAG	-12	NA	97039139	97032685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
transcript_9425.known	chr1	+	7073	15	FSM	ENSG00000123836.15	ENST00000367080.8	7073	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	13.5075564641668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGCTTCTGGGTTTT	9	True	NA	20	True	AATAAA	-23	NA	207053274	207077817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207072203
transcript_9426.known	chr1	+	2590	10	FSM	ENSG00000196352.17	ENST00000367064.9	2590	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	13.3620062070238	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTTATCACAACTAGC	-3	True	NA	17	True	AATAAA	-19	NA	207321677	207360966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207359545
transcript_9429.known	chr1	+	3371	14	FSM	ENSG00000117335.20	ENST00000358170.6	3371	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	294.310507043519	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_94311.nnic	chr9	+	1732	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	29	5045	multi-exon	FALSE	canonical	3	227	junction_1	651.5	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	48	False	NA	24	True	AATAAA	-18	NA	97214862	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97216273_97217364_97219583
transcript_94313.nnic	chr9	+	1881	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-103	5045	multi-exon	FALSE	canonical	3	227	junction_1	205	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	24	True	AATAAA	-18	NA	97214730	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97216273_97217381_97219583
transcript_94317.nnic	chr9	+	1003	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-73	5045	multi-exon	FALSE	canonical	3	284	junction_1	623	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	24	True	AATAAA	-18	NA	97214760	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217104_97217364_97219583
transcript_94319.nnic	chr9	+	1020	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-73	5045	multi-exon	FALSE	canonical	3	284	junction_1	176.5	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	24	True	AATAAA	-18	NA	97214760	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217104_97217381_97219583
transcript_9432.known	chr1	+	3278	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	247.231448017619	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_94321.nnic	chr9	+	867	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-66	5045	multi-exon	FALSE	canonical	3	235	junction_1	647.5	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	24	True	AATAAA	-18	NA	97214767	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217233_97217364_97219583
transcript_94323.nnic	chr9	+	884	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-66	5045	multi-exon	FALSE	canonical	3	235	junction_1	201	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	24	True	AATAAA	-18	NA	97214767	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97217233_97217381_97219583
transcript_94326.nnic	chr9	+	1706	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	43	5045	multi-exon	FALSE	canonical	3	95	junction_1	271	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	62	False	NA	24	True	AATAAA	-18	NA	97214876	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97216302_97217381_97219583
transcript_9433.known	chr1	+	3320	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	247.993223473725	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	-30	True	NA	14	True	AATAAA	-15	NA	207752053	207795504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_94332.known	chr9	-	484	3	FSM	ENSG00000203279.5	ENST00000607322.1	484	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAATTTCAGAAGGTGC	18	True	NA	NA	False	AATATA	-8	NA	97238700	97200474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97200566_97211372_97211488_97238422
transcript_94333.nnic	chr9	+	815	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-144	5045	multi-exon	FALSE	canonical	3	1461	junction_1	0	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	24	True	AATAAA	-18	NA	97214689	97219974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_97215114_97219583
transcript_94336.known	chr9	-	578	2	FSM	ENSG00000203279.5	ENST00000366109.2	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTACTTCGAGCTCCG	40	True	NA	NA	False	AATAAA	-28	NA	97238678	97237763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97238086_97238422
transcript_94337.known	chr9	+	3688	17	FSM	ENSG00000196116.8	ENST00000355295.5	3688	17	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_8	19.4615004560286	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTACCTTTTAATTTC	-32	True	NA	NA	False	AATAAA	-20	NA	97412095	97496125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_97412239_97428459_97428673_97430932_97431075_97432024_97432239_97439244_97439319_97441657_97441876_97460177_97460765_97464841_97465029_97470557_97470670_97472292_97472496_97473491_97473627_97475382_97475470_97478438_97478574_97480827_97480939_97482848_97483352_97487171_97487333_97495662
transcript_94340.known	chr9	-	4116	10	FSM	ENSG00000136925.15	ENST00000341170.5	4116	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	13.6959938271591	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAGAGTGTGCCGTTT	3	True	NA	-1	True	AATAAA	-25	NA	97633368	97600079	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97602768_97604726_97604866_97605482_97605642_97606142_97606262_97610345_97610452_97611573_97611700_97617756_97617878_97625680_97625998_97627397_97627613_97633242
transcript_94343.known	chr9	+	4983	23	FSM	ENSG00000136937.13	ENST00000375147.8	4983	23	0	0	0	0	multi-exon	TRUE	canonical	3	421	junction_4	40.4937501554609	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTTTCCTAATTTA	0	True	NA	16	True	AGTAAA	-1	NA	97633820	97673748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_97633916_97640793_97640883_97641561_97641663_97643203_97643361_97645116_97645225_97645610_97645733_97647491_97647562_97648007_97648224_97650502_97650601_97651309_97651374_97653797_97653909_97654879_97654945_97655701_97655765_97656010_97656086_97658639_97658744_97660945_97661069_97662041_97662145_97662953_97663048_97664339_97664444_97666762_97666878_97668845_97668975_97669592_97669707_97671085
transcript_9435.nic	chr1	+	1861	13	NIC	ENSG00000117335.20	novel	3320	13	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	210.689674376532	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	NA	False	NA	14	True	AATAAA	-15	NA	207752023	207795504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518_207793609_207795004
transcript_94351.known	chr9	-	1577	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.41774882649672	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	12	True	NA	42	True	ATTAAA	-15	NA	97922500	97904488	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
transcript_94353.nic	chr9	-	1372	4	NIC	ENSG00000136932.15	novel	1577	5	NA	NA	-33	-18	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	4.10960933531265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATACAGAGAAATCAC	-21	True	NA	-21	True	AATAAA	-15	NA	97922533	97904551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_97904993_97909959_97910617_97913400_97913559_97922417
transcript_94354.known	chr9	+	1483	7	FSM	ENSG00000136938.9	ENST00000339399.5	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	33.7412540108133	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTATGCTTACAT	-9	True	NA	7	True	AATAAA	-19	NA	97983340	98015943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_97983610_97994630_97994781_97998555_97998679_98004963_98005154_98011270_98011390_98012420_98012473_98015363
transcript_94362.known	chr9	+	1179	6	FSM	ENSG00000095380.11	ENST00000210444.6	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_3	60.068627418978	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	9	True	NA	20	True	AATAAA	-16	NA	98056731	98083077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_98056941_98060781_98060998_98076917_98077018_98078192_98078348_98080815_98081083_98082845
transcript_94368.nnic	chr9	+	1006	4	NIC	ENSG00000095380.11	novel	1179	6	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	392.204311835327	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	NA	False	NA	20	True	AATAAA	-16	NA	98056649	98083077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_98056941_98060781_98060998_98080815_98081083_98082845
transcript_94369.known	chr9	-	5456	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_11	20.6020940923911	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTCCTTTTCTTGAT	12	True	NA	-2	True	AATAAA	-22	NA	98192637	98120974	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_94375.known	chr9	-	3265	13	FSM	ENSG00000095383.20	ENST00000465784.7	3265	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	7.26674311886388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCAGTTACCAGTTG	-6	True	NA	3	True	TATAAA	-45	NA	98255649	98199010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
transcript_94376.known	chr9	-	3046	12	FSM	ENSG00000095383.20	ENST00000342112.9	3046	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	9.33225101949734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTGGAACTTAAACA	12	True	NA	-15	True	TATAAA	-27	NA	98255590	98199028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98255172
transcript_94378.known	chr9	-	646	3	FSM	ENSG00000165138.18	ENST00000466120.1	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	197.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCAGCCCCACGCCCTC	6032	False	NA	NA	False	NA	NA	NA	98790496	98783949	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_98784158_98784831_98784877_98790103
transcript_94379.nnic	chr9	-	800	3	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	240	0	combination_of_known_splicesites	FALSE	canonical	3	412	junction_2	155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTCGTCTTGTGATGA	229	False	NA	-7	True	AGTAAA	-16	NA	98796299	98783569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_98784158_98784831_98784877_98796132
transcript_9438.known	chr1	+	3233	12	FSM	ENSG00000117335.20	ENST00000354848.5	3233	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_6	147.408523251787	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_94380.known	chr9	-	1938	2	FSM	ENSG00000285706.1	ENST00000647710.1	1938	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCATGGTGAATTGACT	NA	False	NA	NA	False	AATAAA	-7	NA	98807564	98798465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_98799610_98806770
transcript_94383.known	chr9	+	587	4	FSM	ENSG00000106803.10	ENST00000498603.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1633.95661577112	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	NA	False	NA	27	True	AATAAA	-19	NA	99222063	99230615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99222172_99222545_99222644_99227898_99228001_99230336
transcript_94384.known	chr9	+	564	4	FSM	ENSG00000106803.10	ENST00000223641.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	3374	junction_1	105.963306017801	2396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	7	True	NA	27	True	AATAAA	-19	NA	99222281	99230615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336
transcript_94385.known	chr9	+	687	2	FSM	ENSG00000106803.10	ENST00000481573.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	3374	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGCTCTTTCCTTTTCCC	0	True	NA	NA	False	TTTAAA	-21	NA	99222314	99223180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99222367_99222545
transcript_94386.known	chr9	-	1652	3	FSM	ENSG00000255145.3	ENST00000529965.3	1652	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGCCCAGGTTGGAGT	519	False	NA	NA	False	NA	NA	NA	99906601	99885217	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_99886696_99894879_99895006_99906553
transcript_94387.known	chr9	+	6885	8	FSM	ENSG00000136874.11	ENST00000259400.11	6885	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	15.3197218496623	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	-12	True	NA	18	True	AATAAA	-18	NA	99906653	99974534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
transcript_94392.nic	chr9	+	1313	8	NIC	ENSG00000136874.11	novel	2523	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.7317401078822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGCTCACTTCCAGCT	30	False	NA	NA	False	AAGAAA	-16	NA	99906695	99968612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_99907099_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
transcript_94395.nnic	chr9	+	1061	3	NNC	ENSG00000136874.11	novel	611	3	NA	NA	-6	-6151	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	18	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAATTTTTTTTTTACA	-18	True	NA	NA	False	AATAAA	-17	NA	99906647	99923018	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_99906707_99915177_99915363_99922201
transcript_94397.known	chr9	-	4808	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_10	41.4804544234216	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAGTAAAAAAAAAAAA	5	True	NA	NA	False	AATAAA	-21	NA	100099000	99979184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
transcript_9440.known	chr1	+	3281	12	FSM	ENSG00000117335.20	ENST00000367041.5	3281	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_11	278.243219605076	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_94405.known	chr9	+	2968	18	FSM	ENSG00000119509.13	ENST00000262456.6	2968	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	10.2757819897918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTCACCTAAAAATGTG	3	True	NA	-29	True	NA	NA	NA	100099274	100300788	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100292437_100292946_100293044_100296916_100297147_100297935_100298011_100300567
transcript_94407.known	chr9	+	4897	17	FSM	ENSG00000119509.13	ENST00000262457.7	4897	17	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	8.6421930087218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTATGGCCTCTTCAAT	-29	True	NA	13	True	AATAAA	-16	NA	100099242	100302175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100293044_100296916_100297147_100297935_100298011_100300567
transcript_94409.known	chr9	+	1654	4	FSM	ENSG00000119509.13	ENST00000374921.3	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	16.4181471413663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAGTGTTTTATAAAA	16	True	NA	NA	False	ATTAAA	-33	NA	100099287	100130903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100129675
transcript_94412.nic	chr9	+	597	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-68	4251	-23	-4251	5prime_fragment	FALSE	canonical	3	43	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCATAGGTTTTATATA	0	True	NA	NA	False	AATAAA	-16	NA	100099219	100126652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_94413.nic	chr9	+	815	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-68	4033	-23	-4033	5prime_fragment	FALSE	canonical	3	43	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACTCAAAGATATTAA	0	True	NA	NA	False	AATAAA	-10	NA	100099219	100126870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_94415.nnic	chr9	-	2818	16	NNC	ENSG00000136891.14	novel	3077	15	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_13	163.596441145752	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	5	True	NA	-14	True	ATTAAA	-18	NA	100352971	100302083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100346879_100347166_100347407_100349183_100349373_100352771
transcript_94421.known	chr9	-	3077	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_12	64.6649133642671	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	-14	True	NA	-14	True	ATTAAA	-18	NA	100352942	100302083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_94428.nnic	chr9	-	2731	13	NIC	ENSG00000136891.14	novel	3077	15	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_8	183.112651271166	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	5	True	NA	-14	True	ATTAAA	-18	NA	100352971	100302083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_94435.known	chr9	+	1880	3	FSM	ENSG00000066697.15	ENST00000395067.7	1880	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	80.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	-6	True	NA	NA	False	ATTAAA	-21	NA	100427142	100451734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100427394_100441905_100442357_100450556
transcript_94438.nic	chr9	+	1559	2	ISM	ENSG00000066697.15	ENST00000374885.5	786	4	66	7292	66	1072	5prime_fragment	FALSE	canonical	3	234	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTATTTCAAACTTTAAA	-9	True	NA	NA	False	NA	NA	NA	100427342	100443413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_100427394_100441905
transcript_94439.known	chr9	+	1755	3	FSM	ENSG00000066697.15	ENST00000613183.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	181.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTG	2119	False	NA	NA	False	AAGAAA	-42	NA	100429513	100451711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100429663_100441905_100442357_100450556
transcript_94440.known	chr9	+	2575	10	FSM	ENSG00000241697.5	ENST00000374879.5	2575	10	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_7	59.7087581722241	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGTTTTGGTGTGT	-3	True	NA	23	True	AATATA	-15	NA	100473148	100577636	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515
transcript_94441.known	chr9	+	2477	8	FSM	ENSG00000148123.15	ENST00000374874.8	2477	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.46410161513775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCATGTCTTTTGT	-19	True	NA	17	True	AAAAAG	-16	NA	101028726	101325135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101029103_101185449_101185558_101269879_101270069_101286103_101286237_101309210_101309462_101312797_101312975_101317364_101317497_101324024
transcript_94442.known	chr9	+	2318	8	FSM	ENSG00000148123.15	ENST00000395056.2	2318	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.46410161513775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTGGCTCATGTCTT	-2	True	NA	13	True	AAAAAG	-12	NA	101185034	101325131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101185256_101185449_101185558_101269879_101270069_101286103_101286237_101309210_101309462_101312797_101312975_101317364_101317497_101324024
transcript_94445.known	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-9	True	NA	-2	True	AATAAA	-16	NA	101398618	101387632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_101390851_101398500
transcript_94446.known	chr9	+	3134	3	FSM	ENSG00000136870.11	ENST00000374861.7	3134	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	-10	True	NA	26	True	ATTAAA	-23	NA	101398872	101410660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101399190_101399925_101400011_101407928
transcript_94447.known	chr9	+	3192	3	FSM	ENSG00000136870.11	ENST00000339664.7	3192	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGTAAGAGTTGTTA	-32	True	NA	20	True	ATTAAA	-17	NA	101398850	101410654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101399190_101399883_101400011_101407928
transcript_94449.known	chr9	-	4225	2	FSM	ENSG00000165152.9	ENST00000374848.8	4225	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGAAGACTTTTATC	1	True	NA	-16	True	AATAAA	-21	NA	101487173	101473169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_101477170_101486948
transcript_9445.known	chr1	+	1258	11	FSM	ENSG00000117335.20	ENST00000480003.5	1258	11	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_7	229.492832132073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTGTTATTCTGTAGTT	39	False	NA	NA	False	ATTAAA	-8	NA	207752122	207793646	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_94451.known	chr9	+	3938	20	FSM	ENSG00000155827.12	ENST00000389120.8	3938	20	0	0	0	0	multi-exon	FALSE	canonical	2	109	junction_4	30.8889531033785	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATGGTTTTTCT	-7	True	NA	18	True	ATTAAA	-18	NA	101533852	101563344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693_101554844_101557383_101557597_101560800_101560927_101561089_101561231_101561909_101562012_101562245
transcript_9446.known	chr1	+	3188	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	192.788718549608	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_94460.nnic	chr9	+	4191	25	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	55.0317932098245	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATCATCAGTGTTTAAT	-28	True	NA	13	True	ATTAAA	-17	NA	104094287	104139652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_94463.known	chr9	+	5928	25	FSM	ENSG00000136824.19	ENST00000374793.8	5928	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	46.5116286236273	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGAGCAGTATGTAC	-7	True	NA	9	True	AATAAA	-14	NA	104094308	104141419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_94464.nnic	chr9	+	2765	18	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	-178	-14698	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	52.7223582441409	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGCAGAAGAAAAATAT	NA	False	NA	NA	False	ACTAAA	-11	NA	104094081	104124953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_94466.nnic	chr9	+	2561	18	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	-12	-14698	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	52.3055304161111	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGCAGAAGAAAAATAT	NA	False	NA	NA	False	ACTAAA	-11	NA	104094247	104124953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_94470.nic	chr9	+	2585	18	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-56	16466	-7	-14698	5prime_fragment	FALSE	canonical	3	105	junction_1	41.1082628355468	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGCAGAAGAAAAATAT	NA	False	NA	NA	False	ACTAAA	-11	NA	104094252	104124953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_94471.nic	chr9	+	2659	18	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	0	16336	0	-14568	5prime_fragment	FALSE	canonical	3	105	junction_1	41.1082628355468	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATGAAAGAAAAACAAC	-7	True	NA	15	True	AAAACA	-21	NA	104094308	104125083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_94486.nnic	chr9	+	1676	11	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	-12	11282	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	58.9193516597051	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGCCTTTAAAAACATGA	NA	False	NA	22	True	AAAAAG	-14	NA	104094247	104113475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315
transcript_94487.nic	chr9	+	1700	11	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-56	27944	-7	11282	5prime_fragment	FALSE	canonical	3	105	junction_1	43.4102522452934	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGCCTTTAAAAACATGA	NA	False	NA	22	True	AAAAAG	-14	NA	104094252	104113475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315
transcript_94489.nnic	chr9	+	1303	10	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	-8	9410	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	60.5568807194454	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAGAGGTTAAAAAGA	-28	True	NA	19	True	NA	NA	NA	104094287	104111603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580
transcript_9449.nic	chr1	+	3842	11	NIC	ENSG00000117335.20	novel	3371	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	386	junction_10	125.075337297167	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGATGATGTGTTT	NA	False	NA	16	True	AATAAA	-17	NA	207752023	207795506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_94497.nnic	chr9	+	1155	8	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	66.661190251257	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	NA	False	NA	NA	False	AATAGA	-26	NA	104094262	104102193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_94498.nnic	chr9	+	1132	8	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	65.9885580681861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	NA	False	NA	NA	False	AATAGA	-26	NA	104094247	104102193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_945.known	chr1	+	3401	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	212	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	26	False	NA	21	True	TATAAA	-30	NA	16367264	16398142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16367309_16393230_16393483_16395037
transcript_94500.nic	chr9	+	1156	8	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-56	39226	-7	0	5prime_fragment	FALSE	canonical	3	105	junction_1	47.4754501542317	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	NA	False	NA	NA	False	AATAGA	-26	NA	104094252	104102193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_94505.known	chr9	+	4266	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	58.7024038879348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	-35	True	NA	12	True	ATTAAA	-16	NA	104094563	104139651	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_94507.known	chr9	+	1636	6	FSM	ENSG00000136783.10	ENST00000374767.5	1636	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	15.0519101777814	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	-2	True	NA	7	True	AATAAA	-14	NA	104747682	104760120	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084_104759172_104759261
transcript_94514.nnic	chr9	-	1204	3	NNC	ENSG00000286536.1	novel	2813	8	NA	NA	-5965	-172448	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	0.5	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTAGTTCCCAACA	405	False	NA	NA	False	AAAAAG	-1	NA	105245186	105198379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_105199359_105226596_105226654_105245018
transcript_94515.nic	chr9	+	1016	8	NIC	ENSG00000106701.13	novel	1906	11	NA	NA	-37	6436	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	6.97809985246846	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGGAAAAGAGAACAAG	9	True	NA	NA	False	AGTAAA	-2	NA	105448085	105512911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903_105472006_105484380_105484503_105506398_105506609_105508616_105508716_105512806
transcript_94519.known	chr9	+	4284	11	FSM	ENSG00000106692.15	ENST00000675668.1	4284	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	15.5077400029792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAATTACCATGCTGC	-7	True	NA	NA	False	NA	NA	NA	105558130	105622823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105558166_105573654_105573747_105574197_105574333_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933
transcript_94520.known	chr9	+	7455	11	FSM	ENSG00000106692.15	ENST00000357998.10	7455	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	10.4120122935002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTGTATTTATTTTT	-7	True	NA	4	True	AATAAA	-19	NA	105558130	105641118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105558166_105573654_105573747_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933_105620062_105635050
transcript_94522.known	chr9	+	7364	10	FSM	ENSG00000106692.15	ENST00000223528.6	7364	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11.3311544746506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTGTATTTATTTTT	-8	True	NA	4	True	AATAAA	-19	NA	105558129	105641118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105558166_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933_105620062_105635050
transcript_94528.known	chr9	+	351	3	FSM	ENSG00000106692.15	ENST00000490134.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATGATGGCAATAATAA	3	True	NA	NA	False	NA	NA	NA	105558140	105596730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105558166_105574944_105575138_105596597
transcript_94529.nnic	chr9	+	699	2	Genic_Genomic	ENSG00000186051.7	novel	668	1	NA	NA	-6214	-9	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGAAAATCACTGTTTAT	-17	True	NA	NA	False	AATAAA	-11	NA	105656242	105663115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Genic_Genomic_chr9_+_105656313_105662486
transcript_94535.known	chr9	+	3545	6	FSM	ENSG00000095209.12	ENST00000374692.8	3545	6	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_5	18.4455956802701	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTGGTAATATTCATT	-3	True	NA	19	True	AATAAA	-34	NA	105694540	105776629	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105748072_105748191_105773864
transcript_94539.nnic	chr9	+	2618	5	NIC	ENSG00000095209.12	novel	3545	6	NA	NA	-8	-800	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	159.869282540456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGGAGTATTACATTAT	-11	True	NA	19	True	ATTAAA	-31	NA	105694532	105775812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105773864
transcript_94543.known	chr9	+	10345	13	FSM	ENSG00000148143.13	ENST00000277225.10	10345	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	7.99826370046789	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGCATCTGTTGTAA	17	True	NA	9	True	AATAAA	-19	NA	106863165	107013634	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_106863356_106923353_106923604_106924132_106929760_106930524_106930690_106932445_106932550_106935502_106935622_106938915_106939108_106972004_106972273_106974136_106974274_106984185_106984410_107003293_107003427_107009544_107009669_107010822
transcript_94545.known	chr9	+	4114	10	FSM	ENSG00000119318.13	ENST00000358015.8	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	16.4384373412506	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	5	True	NA	8	True	TATAAA	-15	NA	107283278	107332189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
transcript_94548.known	chr9	-	5951	37	FSM	ENSG00000070061.16	ENST00000674948.1	5951	37	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_36	37.8482186413177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATGTGTTTATTGATA	56	False	NA	NA	False	AATAGA	-1	NA	108934328	108867537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
transcript_94549.known	chr9	-	5913	37	FSM	ENSG00000070061.16	ENST00000374647.10	5913	37	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_36	34.961387431152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTTTCCTGGAC	-24	True	NA	NA	False	AGTAAA	-16	NA	108934124	108867516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_9455.nic	chr1	+	698	5	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-99	32364	-30	1558	5prime_fragment	FALSE	canonical	3	577	junction_4	43.7864134178629	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACACACCTTTAGTG	NA	False	NA	NA	False	AATAAA	-4	NA	207752023	207761282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248
transcript_94550.known	chr9	-	2522	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	178.351781669518	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTGTGATTTTTAAAA	-1	True	NA	0	True	AATAAA	-26	NA	109013522	108942568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_94551.known	chr9	-	2454	19	FSM	ENSG00000119326.15	ENST00000325551.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_11	65.9140854951858	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAATTGTAGTGTGAT	22	True	NA	-8	True	AATAAA	-18	NA	109013499	108942576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_94554.nnic	chr9	-	2268	18	NIC	ENSG00000119326.15	novel	2454	19	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_17	184.27981957641	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAATTGTAGTGTGAT	18	True	NA	-8	True	AATAAA	-18	NA	109013503	108942576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_109013301
transcript_94558.known	chr9	+	1901	6	FSM	ENSG00000119328.12	ENST00000322940.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	11.6550418274668	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	-46	True	NA	NA	False	AATAAA	-19	NA	108934399	108940954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108939195_108939273_108939384_108939455_108939548
transcript_94559.nnic	chr9	+	1745	5	NIC	ENSG00000119328.12	novel	1901	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	78.8289287000654	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	-20	True	NA	NA	False	AATAAA	-19	NA	108934425	108940954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_108934566_108935637_108935690_108939195_108939273_108939384_108939455_108939548
transcript_94563.nnic	chr9	-	2872	17	NNC	ENSG00000095203.15	novel	4006	16	NA	NA	-27	-427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	62.2745935354058	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCCATCTTCATT	NA	False	NA	-11	True	AATAAA	-17	NA	109321086	109240157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_109241810_109243617_109243683_109247755_109247790_109251480_109251512_109253440_109253551_109255510_109255681_109255773_109255844_109256135_109256225_109256392_109256481_109258176_109258298_109263049_109263103_109264979_109265025_109267472_109267552_109268390_109268434_109279816_109279922_109320140_109320209_109321037
transcript_94565.nic	chr9	+	1267	3	ISM	ENSG00000157654.19	ENST00000259318.7	3101	4	12965	-601	295	-497	3prime_fragment	FALSE	canonical	3	45	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATTGAAAAAAAAGGCGAA	856	False	NA	-64	True	NA	NA	NA	110138465	110169412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_110138540_110156318_110156498_110168398
transcript_94566.known	chr9	+	6866	4	FSM	ENSG00000157654.19	ENST00000374525.5	6866	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	19.6015872373189	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	2	True	NA	NA	False	ATTAAA	-28	NA	110048695	110172512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110168398
transcript_94567.known	chr9	+	860	2	FSM	ENSG00000157654.19	ENST00000482335.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCAGCCTACATGGCAC	561	False	NA	NA	False	NA	NA	NA	110138170	110168889	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_110138540_110168398
transcript_94570.known	chr9	-	737	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	3	7787	junction_4	185.028376202138	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTGACAGAGAAAATAG	0	True	NA	NA	False	AATAAA	-22	NA	110256507	110243809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
transcript_94575.known	chr9	-	1941	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	394.58073951981	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGCCGGGCGTGGTGGCT	NA	False	NA	-11	True	AATAAA	-24	NA	111599893	111562576	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_94579.nic	chr9	-	1450	11	NIC	ENSG00000106853.20	novel	1941	11	NA	NA	114	1	combination_of_known_junctions	FALSE	canonical	3	178	junction_2	442.347420021865	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTAGTGATGGAGGAT	331	False	NA	34	True	AATAAA	-17	NA	111599533	111562971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_94585.known	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_9	292.361183689619	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	5	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_94587.known	chr9	-	1599	10	FSM	ENSG00000106853.20	ENST00000407693.7	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_9	153.140297169896	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCCTGTA	0	True	NA	-1	True	AATAAA	-34	NA	111599647	111562566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_9459.nic	chr1	+	2670	4	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-99	31916	-30	2006	intron_retention	FALSE	canonical	3	579	junction_1	40.9416929574514	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACACTGGCTTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	207752023	207761730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638
transcript_9460.known	chr1	-	7969	8	FSM	ENSG00000174059.17	ENST00000310833.12	7969	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1.67819144635296	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTCACTTTAACCCTT	-21	True	NA	NA	False	NA	NA	NA	207911125	207880971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_207887924_207888681_207888847_207889160_207889214_207889464_207889622_207897492_207897574_207898972_207899227_207899820_207900004_207911001
transcript_94600.known	chr9	+	1239	6	FSM	ENSG00000173258.13	ENST00000355824.7	1239	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	11.2782977438973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAAT	-5	True	NA	NA	False	NA	NA	NA	111525188	111539761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111539445
transcript_94602.known	chr9	+	2433	6	FSM	ENSG00000173258.13	ENST00000358151.8	2433	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	11.9599331101808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAAAGGAAT	-35	True	NA	NA	False	NA	NA	NA	111525158	111577844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111576364
transcript_94606.known	chr9	-	847	4	FSM	ENSG00000106853.20	ENST00000374308.1	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	452.012045070581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGTATACAGAGATAAG	5	True	NA	NA	False	NA	NA	NA	111599407	111592366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599338
transcript_94608.known	chr9	-	1061	4	FSM	ENSG00000106853.20	ENST00000374313.5	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	215.134583200584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACACAGTCTTTCCAT	19	True	NA	NA	False	AATATA	-37	NA	111599816	111592297	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599602
transcript_94616.known	chr9	+	1201	3	FSM	ENSG00000242616.4	ENST00000374293.5	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_2	121	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTCTATGACAGCAA	14	True	NA	15	True	AATAAA	-17	NA	111661604	111670226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111661716_111666814_111666947_111669268
transcript_94618.nic	chr9	+	1096	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-34	-136	combination_of_known_splicesites	FALSE	canonical	3	202	junction_2	198.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTTAACTTCACAAGT	-20	True	NA	NA	False	ATTAAA	-30	NA	111661570	111670090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_94619.nic	chr9	+	1235	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-34	3	combination_of_known_splicesites	FALSE	canonical	3	202	junction_2	198.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGACAGCAATAT	-20	True	NA	18	True	AATAAA	-20	NA	111661570	111670229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_9462.nic	chr1	+	981	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_3	10.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-4	True	NA	21	True	ACTAAA	-21	NA	209428816	209432549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
transcript_94621.known	chr9	+	3959	9	FSM	ENSG00000148154.10	ENST00000374279.4	3959	9	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_7	23.3127513391277	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGCAATAGTGTATTTT	0	True	NA	15	True	AATAAA	-20	NA	111896813	111935369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
transcript_94624.known	chr9	-	3015	17	FSM	ENSG00000106868.17	ENST00000374270.8	3015	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	3.04138126514911	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTCTTCCCTTGGTTA	32	True	NA	-1	True	AGTAAA	-17	NA	112175297	112040782	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112041493_112041866_112041961_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
transcript_94626.known	chr9	-	3413	15	FSM	ENSG00000119314.16	ENST00000374255.6	3413	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	106.313456440886	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTATTATTTCTTCAA	2	True	NA	-54	True	AAGAAA	-1	NA	112333625	112222244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297840_112297917_112330440_112330475_112333469
transcript_94627.known	chr9	+	3174	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_7	12.1692234756372	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	6	True	NA	12	True	AATAAA	-18	NA	112380107	112472405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_9463.known	chr1	+	798	5	FSM	ENSG00000230937.13	ENST00000657184.2	809	5	1	10	0	-10	multi-exon	FALSE	canonical	3	6	junction_4	18.0883249639097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGGCAGATTGCAGAT	-1	True	NA	9	True	AATAAA	-21	NA	209428819	209432838	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432672
transcript_9464.known	chr1	+	1007	5	FSM	ENSG00000230937.13	ENST00000429156.6	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	15.3704261489394	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTCTATGTTTTA	-4	True	NA	23	True	ACTAAA	-23	NA	209428816	209432551	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
transcript_94641.known	chr9	+	2983	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	45.7902828119679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	60	False	NA	12	True	AATAAA	-18	NA	112380079	112472405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_9465.known	chr1	+	908	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	18	0	1	0	multi-exon	FALSE	canonical	3	22	junction_2	13.4742552876052	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	17	False	NA	21	True	ACTAAA	-21	NA	209428837	209432549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
transcript_94655.nic	chr9	-	1175	6	NIC	ENSG00000148153.14	novel	964	6	NA	NA	-9	130	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	85.8869023774871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	-42	True	NA	-74	True	AATAAA	-18	NA	112718126	112686966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112687634_112689526_112689618_112694130_112694234_112701787_112701881_112716460_112716542_112717986
transcript_94656.known	chr9	-	4114	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	19.1898410623955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTCCTGAACAAT	-33	True	NA	-14	True	AATAAA	-31	NA	112718117	112683925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
transcript_9466.nic	chr1	+	846	3	FSM	ENSG00000230937.13	ENST00000692388.1	843	3	-3	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	20.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-4	True	NA	21	True	ACTAAA	-21	NA	209428816	209432549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429089_209429180_209429409_209432203
transcript_94660.nnic	chr9	-	1566	5	NNC	ENSG00000148153.14	novel	4114	5	NA	NA	90	130	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	79.8040569144201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	88	False	NA	-74	True	AATAAA	-18	NA	112717996	112686966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717372
transcript_94663.known	chr9	-	874	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	78.7922726047562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	NA	False	NA	NA	False	AATGAA	-27	NA	112718149	112687116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
transcript_94666.nic	chr9	-	991	4	NIC	ENSG00000148153.14	novel	4114	5	NA	NA	-9	130	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	58.6590904198905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	-42	True	NA	-74	True	AATAAA	-18	NA	112718126	112686966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112687634_112694130_112694234_112716460_112716542_112717986
transcript_94668.known	chr9	-	2414	5	FSM	ENSG00000228623.7	ENST00000638622.1	2414	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	6.97764286847643	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGGGAAAGCCTGCA	NA	False	NA	85	True	NA	NA	NA	113012227	112997119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
transcript_94675.nnic	chr9	-	1140	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	8	-1179	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	25.1705295048705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAATAAATAAATGTA	-20	True	NA	-43	True	AATAAA	-35	NA	113012219	112998298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_112999139_112999664_112999815_113001993_113002074_113012149
transcript_94677.nic	chr9	-	372	4	FSM	ENSG00000228623.7	ENST00000685276.1	407	4	30	5	-5	-5	multi-exon	FALSE	canonical	3	49	junction_3	7.25718035235908	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGTTTTCCTGAGTT	-1	True	NA	-16	True	AATAAA	-14	NA	113012200	112999660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_112999815_113001993_113002074_113011140_113011228_113012149
transcript_94678.known	chr9	-	2451	4	FSM	ENSG00000136866.14	ENST00000555206.5	2451	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	7.1336448530109	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTTTTTAAAAGGGTT	31	False	NA	NA	False	NA	NA	NA	113056759	113042240	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113044269_113049361_113049497_113049790_113049876_113056556
transcript_94682.known	chr9	-	8807	28	FSM	ENSG00000119321.10	ENST00000446284.6	8807	28	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	8.29563489427059	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGCTTATTAGAGCTG	-12	True	NA	-1	True	AATAAA	-18	NA	113221318	113161005	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113166156_113168459_113168557_113169223_113169943_113170521_113170630_113171580_113171707_113173452_113173606_113174427_113174584_113176536_113176674_113178629_113178802_113182765_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_94683.known	chr9	+	1723	4	FSM	ENSG00000136867.11	ENST00000259392.8	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.62466929133727	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTTCTGTTCTCCT	2	True	NA	17	True	ATTAAA	-44	NA	113151006	113164140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113151081_113157726_113157794_113161508_113161699_113162748
transcript_94687.known	chr9	+	4762	5	FSM	ENSG00000136868.11	ENST00000374212.5	4762	5	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_4	54.5825063550585	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	-21	True	NA	25	True	AATAAA	-22	NA	113221543	113264492	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113221679_113256113_113256278_113257112_113257186_113258693_113258863_113260271
transcript_9469.known	chr1	+	1072	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	8.80656320908194	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-3	True	NA	21	True	ACTAAA	-21	NA	209428817	209432549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
transcript_94693.nnic	chr9	-	860	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	451.598887903364	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-11	True	NA	-56	True	AATAAA	-33	NA	113275589	113266991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_113267440_113272426_113272521_113273328_113273439_113275381
transcript_94694.nnic	chr9	-	859	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_3	510.248523325208	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-10	True	NA	-56	True	AATAAA	-33	NA	113275588	113266991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275381
transcript_94697.known	chr9	-	871	4	FSM	ENSG00000176386.9	ENST00000374206.4	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_3	167.453476125958	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	6	True	NA	-56	True	AATAAA	-33	NA	113275572	113266991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113267440_113272426_113272549_113273328_113273439_113275381
transcript_94698.known	chr9	+	475	2	FSM	ENSG00000136868.11	ENST00000496650.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTTCTAGTTTCTG	22	True	NA	NA	False	AATAAA	-16	NA	113221586	113227660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113221679_113227277
transcript_9470.known	chr1	+	2456	13	FSM	ENSG00000008118.10	ENST00000361322.3	2456	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.81811868577262	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTCATTTGGTTCTT	-2	True	NA	6	True	AATAAA	-20	NA	209583713	209613939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209583773_209594954_209595076_209599982_209600112_209603213_209603289_209605535_209605675_209606319_209606444_209607857_209607934_209608979_209609093_209609850_209609930_209611464_209611553_209611791_209612217_209612784_209612913_209613039
transcript_94702.known	chr9	+	2897	14	FSM	ENSG00000136875.13	ENST00000374198.5	2897	14	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	24.0352305520939	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGTCCATAGAGGTC	-13	True	NA	54	True	TATAAA	-38	NA	113275657	113292905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_9471.known	chr1	+	876	2	FSM	ENSG00000123689.6	ENST00000367029.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTAATTCCTGAGAG	0	True	NA	16	True	AATAAA	-19	NA	209675411	209676390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209675550_209675652
transcript_94717.known	chr9	-	4871	11	FSM	ENSG00000148225.16	ENST00000374193.9	4871	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.51327459504216	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTGATGTCAAATT	20	False	NA	0	True	AATAAA	-20	NA	113340275	113313221	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113316910_113318474_113318638_113320356_113320499_113321510_113321579_113322810_113322912_113323010_113323156_113328880_113328956_113330983_113331117_113331906_113332051_113336287_113336441_113340216
transcript_94718.known	chr9	-	1481	3	FSM	ENSG00000119431.10	ENST00000374180.4	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	27	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCCTAGCCTCTGCCC	-1	True	NA	-9	True	AATAAA	-37	NA	113376986	113373421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113374530_113375452_113375568_113376728
transcript_94719.known	chr9	-	1834	2	FSM	ENSG00000119431.10	ENST00000238379.9	1834	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTAGCCTCTGCCCTCC	810	False	NA	-6	True	AATAAA	-40	NA	113376175	113373418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113374530_113375452
transcript_9472.known	chr1	-	4684	2	FSM	ENSG00000162757.4	ENST00000294811.2	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGAATTTTGTCCC	-7	True	NA	NA	False	ATTAAA	-16	NA	209784559	209779207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_209783710_209784377
transcript_94720.known	chr9	-	3129	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	16.856712619327	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTGAATGTCTTGT	-2	True	NA	-10	True	AATAAA	-43	NA	113401284	113386311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_94722.nic	chr9	-	3274	11	NIC	ENSG00000148218.16	novel	3129	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	109	junction_6	9.89141041510259	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTGAATGTCTTGT	-26	True	NA	-10	True	AATAAA	-43	NA	113401308	113386311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_94724.nic	chr9	-	1376	11	NIC	ENSG00000148218.16	novel	3129	12	NA	NA	-18	1581	intron_retention	FALSE	canonical	3	109	junction_6	9.89141041510259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCCTCATGCCCTCTT	-26	True	NA	-7	True	AGTAAA	-15	NA	113401308	113388209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_94725.known	chr9	-	547	2	FSM	ENSG00000148218.16	ENST00000494848.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTAAAGTGCTATGTAC	-2	True	NA	NA	False	NA	NA	NA	113401284	113393160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113393635_113401211
transcript_94729.known	chr9	-	2194	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	173.691357010071	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-1	True	NA	-16	True	AATAAA	-16	NA	113410675	113407234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
transcript_9473.known	chr1	-	4478	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	9.62743475698485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGACTACTTTCTACT	-7	True	NA	-2	True	AATAAA	-26	NA	209806142	209785616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
transcript_94731.known	chr9	+	1503	5	FSM	ENSG00000138835.22	ENST00000620489.1	1503	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	10.7325439668328	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	-13	True	NA	11	True	AATAAA	-18	NA	113594128	113597729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_94734.nic	chr9	+	1200	2	ISM	ENSG00000138835.22	ENST00000317613.10	2542	18	-66	61615	-63	-5217	5prime_fragment	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACCATACATTCC	NA	False	NA	NA	False	NA	NA	NA	113463665	113480474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_113463882_113479490
transcript_94735.known	chr9	-	1262	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_4	2.11403306560449	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-2	True	NA	3	True	AATAAA	-24	NA	114078300	114060126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
transcript_94737.nnic	chr9	+	764	6	NNC	ENSG00000228278.5	novel	759	6	NA	NA	-2672	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	1.32664991614216	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCTGTTAGTCATTTG	2078	False	NA	NA	False	AATAAA	-19	NA	114327196	114333251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_114327352_114330433_114330577_114330791_114330863_114331566_114331675_114331825_114331930_114333068
transcript_94740.known	chr9	+	1563	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_1	63.5	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	-12	True	NA	21	True	AATACA	-32	NA	114587768	114598879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_114587921_114592551_114592653_114597569
transcript_94741.known	chr9	+	1385	3	FSM	ENSG00000136888.8	ENST00000678234.1	1385	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1381.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCACACATATCACATA	-19	True	NA	-50	True	NA	NA	NA	114587761	114598496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_114588119_114592551_114592653_114597569
transcript_94742.known	chr9	+	978	2	FSM	ENSG00000136888.8	ENST00000677452.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATTCTTTTTTTTTTCC	-29	True	NA	24	True	AGTAAA	-20	NA	114587751	114598378	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_114587921_114597569
transcript_94744.known	chr9	-	427	3	FSM	ENSG00000234692.1	ENST00000444701.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCCACTAATATGAT	8290	False	NA	NA	False	AATAAA	-15	NA	115254251	115252537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_115252847_115253112_115253164_115254184
transcript_94746.known	chr9	-	1757	9	FSM	ENSG00000148219.18	ENST00000341734.8	1757	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.079529376955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	3	True	NA	-6	True	ATTAAA	-18	NA	116687234	116425227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_116425627_116425875_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_94748.nic	chr9	-	2035	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-29	0	intron_retention	FALSE	canonical	3	33	junction_7	11.246768243294	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-26	True	NA	-6	True	ATTAAA	-18	NA	116687263	116425227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_94750.known	chr9	+	3715	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	-24	True	NA	14	True	ATTAAA	-15	NA	116687304	116701299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_116687382_116697661
transcript_94752.known	chr9	+	3688	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTCTTTTCATC	1	True	NA	15	True	ATTAAA	-16	NA	116687329	116701300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_116687382_116697664
transcript_94754.known	chr9	-	3171	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	7.88695642390986	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTTATGCTTAATT	6	True	NA	-20	True	GATAAA	-27	NA	119369435	119166628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_94757.known	chr9	-	970	11	FSM	ENSG00000136861.19	ENST00000472883.2	970	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.411182153938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGGAAAGAGAAATTG	96	False	NA	-18	True	NA	NA	NA	120580061	120527905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120527926_120528743_120528774_120528892_120528905_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_94760.known	chr9	-	5551	35	FSM	ENSG00000136861.19	ENST00000360822.8	5173	35	-11	-367	0	6	multi-exon	FALSE	canonical	1	1	junction_17	46.3327535167392	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTCTGTTGTTTTGTGTG	-13	True	NA	-1	True	ATTAAA	-24	NA	120580170	120388868	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120467859_120467998_120470110_120470218_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_94761.known	chr9	-	5985	37	FSM	ENSG00000136861.19	ENST00000360190.8	5985	37	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	40.8720054968353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACGATTCTGTTGTT	-1	True	NA	-8	True	ATTAAA	-17	NA	120580158	120388875	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_94763.known	chr9	-	9142	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	48.4220391717555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCGTTGAAGTGTTCT	-11	True	NA	-3	True	NA	NA	NA	120793416	120756973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
transcript_94766.known	chr9	-	8498	8	FSM	ENSG00000119402.18	ENST00000684047.1	8498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	79.7493522461059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAAGTTAGCCGGGC	-12	True	NA	NA	False	ACTAAA	-2	NA	120793367	120753059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120753115_120757719_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148
transcript_9477.known	chr1	-	4256	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	34.8743777324015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATTAGAAGACTACTT	NA	False	NA	-8	True	AATAAA	-20	NA	209806175	209785622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
transcript_94771.known	chr9	+	430	2	FSM	ENSG00000214654.9	ENST00000437707.2	3574	2	48	3096	48	-87	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCATGCCTTGCTTTTT	81	False	NA	NA	False	NA	NA	NA	120793550	120798632	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_120793923_120798574
transcript_94773.known	chr9	-	3381	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_6	34.24097610239	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACTGCCTATTA	11	True	NA	NA	False	AATAAA	-35	NA	120842922	120816052	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_94776.known	chr9	-	1538	9	FSM	ENSG00000095261.14	ENST00000373904.5	1538	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.4161782373627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCAGATGTTACTTT	-18	True	NA	NA	False	NA	NA	NA	120842951	120817795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831831_120831946_120833311_120833457_120842736
transcript_94778.nic	chr9	-	1395	5	ISM	ENSG00000095261.14	ENST00000210313.8	3381	10	-58	12393	-29	-1851	5prime_fragment	FALSE	canonical	3	211	junction_1	49.7795138586146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATATGAGCTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	120842980	120828445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_94779.known	chr9	+	1970	4	FSM	ENSG00000226752.10	ENST00000640066.1	1970	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.5973853695808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTGCCTGTATTGCT	5	True	NA	NA	False	AGTAAA	-29	NA	120843099	120852603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_120843440_120844992_120845197_120847293_120847354_120851237
transcript_94780.known	chr9	+	707	3	FSM	ENSG00000226752.10	ENST00000640391.2	2751	3	0	2044	0	-8	multi-exon	FALSE	canonical	2	3	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTCTGGATTTCATGT	96	False	NA	NA	False	NA	NA	NA	120842995	120851440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_120843440_120847293_120847354_120851237
transcript_94781.known	chr9	-	567	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGTAAACCCCTTTC	51	False	NA	NA	False	AATAAA	-14	NA	120842882	120831669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120831946_120833311_120833457_120842736
transcript_94783.known	chr9	-	836	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	8.4372685153431	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	-6	True	NA	-35	True	AATAAA	-27	NA	120877188	120869586	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_94784.known	chr9	-	5464	41	FSM	ENSG00000106804.8	ENST00000223642.3	5464	41	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_21	10.5952524745756	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCTAAAAAGCCTGTTA	-2	True	NA	-12	True	ATTAAA	-20	NA	121050275	120952334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_120952869_120953729_120953869_120957284_120957369_120960247_120960338_120961481_120961566_120962670_120962777_120962892_120962968_120963635_120963739_120969060_120969119_120970169_120970252_120971929_120971993_120974778_120974932_120976699_120976906_120980082_120980255_120981843_120981940_120982654_120982815_120989045_120989122_120989567_120989781_120991190_120991281_120996239_120996301_120997546_120997775_121005918_121006059_121006903_121006978_121008407_121008499_121013872_121014071_121015198_121015262_121016253_121016384_121017361_121017512_121017642_121017853_121019975_121020180_121021508_121021695_121023403_121023520_121025453_121025581_121027159_121027275_121030396_121030488_121032112_121032196_121034802_121034895_121037880_121037952_121043003_121043167_121046190_121046384_121050181
transcript_94788.nic	chr9	+	1799	10	ISM	ENSG00000119397.19	ENST00000687169.1	9959	43	-177	63739	-95	0	5prime_fragment	FALSE	canonical	3	11	junction_1	5.97112393001973	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTGGAAGACAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	121074784	121113691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_121075068_121080305_121080479_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501
transcript_94789.nic	chr9	+	1904	9	ISM	ENSG00000119397.19	ENST00000373847.6	5449	32	-455	47814	-153	0	5prime_fragment	FALSE	canonical	3	16	junction_1	4.38570119821221	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTGGAAGACAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	121074506	121113691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_121075068_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501
transcript_9479.known	chr1	+	8481	12	FSM	ENSG00000117597.18	ENST00000491415.7	8481	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	10.5227027292076	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGGAGTACTGATT	-44	True	NA	10	True	ATTAAA	-19	NA	209827971	209857565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_209828171_209830107_209830148_209830802_209831044_209833184_209833359_209835074_209835164_209836800_209837212_209838908_209839129_209840852_209841056_209842264_209842448_209842582_209842696_209843450_209843697_209851203
transcript_94798.known	chr9	+	2595	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	47.2515172492158	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	-7	True	NA	16	True	AATAAA	-17	NA	121268161	121332842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_94800.known	chr9	-	4149	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	13.9532747966569	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCACTGTGCTGCTCT	15	True	NA	NA	False	AATAAA	-19	NA	121201869	121178132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
transcript_94802.known	chr9	-	3145	7	FSM	ENSG00000148175.13	ENST00000286713.7	3145	7	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_3	26.1772802254168	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTGGTTGGCTTCTTC	-4	True	NA	-6	True	NA	NA	NA	121370250	121338986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_121341409_121348014_121348150_121349119_121349324_121353219_121353303_121354600_121354674_121356052_121356157_121370126
transcript_94804.known	chr9	-	804	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_3	48.6415460280612	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-11	True	NA	-11	True	ATTAAA	-15	NA	122159779	122144057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
transcript_94805.nnic	chr9	-	651	3	NIC	ENSG00000119421.7	novel	804	4	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	120	junction_2	597	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	17	False	122159807	-11	True	ATTAAA	-15	NA	122159790	122144057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_122144379_122148111_122148278_122159626
transcript_94806.known	chr9	+	596	4	FSM	ENSG00000185681.13	ENST00000536616.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTGTATTTTCCTTAA	-11	True	NA	NA	False	AATAAA	-21	NA	122159907	122200088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122160020_122166767_122166916_122174495_122174628_122199884
transcript_94814.known	chr9	+	1186	9	FSM	ENSG00000148187.18	ENST00000470366.5	1186	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	55.670908022054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGACTTCTCTCCCTCC	8	False	NA	NA	False	NA	NA	NA	122264925	122322678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
transcript_94821.nic	chr9	+	2412	8	NIC	ENSG00000148187.18	novel	1186	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	21	junction_4	48.4612195050678	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	NA	False	NA	NA	False	AATAAA	-43	NA	122264601	122323088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
transcript_94823.nic	chr9	+	1440	8	NIC	ENSG00000148187.18	novel	9594	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	60.8879868182182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	-6	True	NA	NA	False	AATAAA	-43	NA	122264870	122323088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_122264939_122265461_122265546_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_94826.nic	chr9	+	1675	8	NIC	ENSG00000148187.18	novel	9594	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	59.2614408139638	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	-6	True	NA	NA	False	AATAAA	-43	NA	122264870	122323088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_122264939_122265461_122265781_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_94829.known	chr9	+	9594	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	11.0302614051829	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTTGGTGATTCTTT	5	True	NA	NA	False	ATTAAA	-21	NA	122264881	122331337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_94836.known	chr9	-	889	7	FSM	ENSG00000119446.14	ENST00000483428.1	889	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	138.936936133709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTTTTGGATGTTCT	31	False	NA	-119	True	NA	NA	NA	122264794	122241757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122254273_122254368_122261379_122261509_122264714
transcript_94837.known	chr9	+	1176	6	FSM	ENSG00000148187.18	ENST00000373723.9	1176	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	55.4422221776869	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTGGATTGATGATC	18	True	NA	NA	False	AATAAA	-36	NA	122264894	122323092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
transcript_94839.known	chr9	+	1841	6	FSM	ENSG00000148187.18	ENST00000297908.7	1841	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	54.3197938140417	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	NA	False	NA	12	True	AATAAA	-23	NA	122264602	122323461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122264939_122270863_122271076_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_94843.known	chr9	-	4977	6	FSM	ENSG00000119446.14	ENST00000417201.4	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	26.8626134246093	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTCTTAGTCAATGT	-15	True	NA	2	True	AATAAA	-32	NA	122264840	122237621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122261379_122261509_122264714
transcript_94849.nic	chr9	+	1691	2	ISM	ENSG00000148187.18	ENST00000441707.5	858	5	-16	18203	-11	-18203	5prime_fragment	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAATTCAGGCCGGC	-6	True	NA	NA	False	NA	NA	NA	122264870	122267084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_122264939_122265461
transcript_94851.known	chr9	+	5020	11	FSM	ENSG00000095303.17	ENST00000362012.7	5020	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	3.53411940941446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTATTTGTGGGGG	1	True	NA	3	True	AATAAA	-15	NA	122371023	122395703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122371092_122371185_122371273_122377898_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
transcript_94852.known	chr9	+	2541	11	FSM	ENSG00000095303.17	ENST00000647067.1	2541	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.78434948556227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCTGTTTCTCATGA	2	True	NA	-39	True	NA	NA	NA	122371024	122393254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122371092_122371185_122371273_122377927_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
transcript_94853.nnic	chr9	-	1068	5	NNC	ENSG00000136940.14	novel	3017	4	NA	NA	0	604	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	170.637591110517	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGCTGAATAACCTT	-9	True	NA	NA	False	AATAAA	-18	NA	122828588	122819939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_122820637_122823015_122823083_122823188_122823198_122826615_122826793_122828470
transcript_94854.known	chr9	-	3017	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	43.5303214884624	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTCACCATGTTGGCC	-9	True	NA	NA	False	NA	NA	NA	122828588	122818096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
transcript_94857.nic	chr9	-	1417	4	NIC	ENSG00000136940.14	novel	3017	4	NA	NA	-60	604	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	190.550664012371	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGCTGAATAACCTT	NA	False	NA	NA	False	AATAAA	-18	NA	122828648	122819939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_122820820_122823015_122823198_122826615_122826793_122828470
transcript_94859.nnic	chr9	-	1006	3	NIC	ENSG00000136940.14	novel	3017	4	NA	NA	-9	604	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	154	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGCTGAATAACCTT	-18	True	NA	NA	False	AATAAA	-18	NA	122828597	122819939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_122820637_122823015_122823198_122828470
transcript_94860.known	chr9	-	749	3	FSM	ENSG00000056586.16	ENST00000471874.2	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	7	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTATTGCTGTTT	7941	False	NA	-10	True	ATTAAA	-18	NA	122897534	122890170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122890546_122892908_122893027_122897278
transcript_94861.known	chr9	-	4455	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	-4	True	NA	NA	False	AATAAA	-16	NA	122931512	122915565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122919945_122931436
transcript_94863.known	chr9	+	914	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACCTTGTCCATTTCTG	7727	False	NA	25	True	AATAAA	-27	NA	122939419	122940333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122939400_122940300
transcript_94865.known	chr9	+	4986	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	25.3598107248457	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	-11	True	NA	77	True	ATTAAA	-19	NA	122941019	123104866	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
transcript_94868.nic	chr9	+	1508	10	ISM	ENSG00000011454.18	ENST00000373647.9	4986	26	-11	106100	-11	1431	5prime_fragment	FALSE	canonical	3	165	junction_1	19.634311111916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTATTTTTCTATTAA	-22	True	NA	NA	False	ACTAAA	-5	NA	122941008	122998766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596
transcript_94869.known	chr9	+	2186	5	FSM	ENSG00000011454.18	ENST00000317419.7	2186	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	19.5512147960172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	122941019	122990769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296
transcript_9487.known	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	116	False	NA	1	True	AATAAA	-35	NA	210234044	210231455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_210231772_210233634
transcript_94870.known	chr9	-	325	2	FSM	ENSG00000286718.2	ENST00000656036.2	519	2	0	194	0	-194	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAAGCGGACTGGGTA	-6	True	NA	NA	False	NA	NA	NA	122941260	122940732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_122940936_122941138
transcript_94871.known	chr9	-	3612	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	17.3097515868946	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTACTTCCATTAC	3	True	NA	NA	False	ACTAAA	-13	NA	123930126	123400098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_94877.known	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1951	junction_2	126.403468048523	2927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-3	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
transcript_9488.known	chr1	+	3639	12	FSM	ENSG00000054392.13	ENST00000261458.8	3639	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	5.25388482792723	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTATTTGAGGCTGAT	-25	True	NA	15	True	AATAAA	-16	NA	210328901	210676290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_210329105_210348932_210349067_210362851_210362920_210387467_210387582_210400467_210400663_210404463_210404680_210418153_210418326_210464504_210464656_210513152_210513189_210587897_210588100_210623525_210623671_210674287
transcript_94883.known	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	21296	junction_3	2938.86814947524	16443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-2	True	NA	-19	True	AATAAA	-17	NA	124861957	124857882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
transcript_94884.known	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	25379	junction_1	1546.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	7100	False	NA	-19	True	AATAAA	-17	NA	124861936	124857882	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124858068_124860182_124860265_124861418
transcript_94885.known	chr9	-	493	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	12637.8109160566	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCTGGCACTTCC	7121	False	NA	-16	True	AATAAA	-20	NA	124861915	124857879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
transcript_94887.known	chr9	+	1325	4	FSM	ENSG00000136950.13	ENST00000259477.6	1325	4	0	0	0	0	multi-exon	FALSE	canonical	1	406	junction_1	370.945638425183	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAATAATTGATCTA	19	True	NA	NA	False	AATAAA	-7	NA	124869204	124877717	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_124869440_124873691_124873765_124874974_124875152_124876877
transcript_94894.known	chr9	-	4103	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_2	21.4864298259778	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGCTTGACTGGTGA	-17	True	NA	-1	True	ATTAAA	-18	NA	125189803	125146572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
transcript_94897.known	chr9	-	4172	6	FSM	ENSG00000119414.12	ENST00000415905.5	4172	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	159.784104340826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGCTTGACTGGTG	NA	False	NA	-2	True	ATTAAA	-17	NA	125189939	125146573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125171084_125171181_125189643
transcript_949.known	chr1	+	981	9	FSM	ENSG00000157191.20	ENST00000459640.5	981	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	181.357381983751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAAGCCCTCCTCAGCT	27	True	NA	NA	False	NA	NA	NA	16440755	16458956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16450124_16450242_16451837_16452016_16455817_16455894_16458841
transcript_94901.known	chr9	+	1466	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	81.8503779771358	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	6	True	NA	113	True	ACTAAA	-20	NA	125200541	125234158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94907.known	chr9	+	1313	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	109.687868843499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	6	True	NA	113	True	ACTAAA	-20	NA	125200541	125234158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_9491.known	chr1	+	4474	12	FSM	ENSG00000117625.14	ENST00000419091.7	4474	12	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	24.1239910078901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTAATGTAGGCCT	-19	True	NA	7	True	AATAAA	-18	NA	211259365	211316385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
transcript_94910.known	chr9	+	1671	8	FSM	ENSG00000136933.17	ENST00000373538.8	1671	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	58.2377253424378	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGGGAATGACTTTCA	6	True	NA	NA	False	ACTAAA	-23	NA	125200541	125234161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94911.nnic	chr9	+	1018	7	NIC	ENSG00000136933.17	novel	1313	8	NA	NA	-25	-158	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	115.900819669233	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	-19	True	NA	16	True	AATAAA	-17	NA	125200516	125234000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
transcript_94913.nnic	chr9	+	1348	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	0	-158	intron_retention	FALSE	canonical	3	15	junction_4	106.178570761189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	6	True	NA	16	True	AATAAA	-17	NA	125200541	125234000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125227909_125228060_125232595_125232746_125233687
transcript_94914.nic	chr9	+	1357	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	0	-158	intron_retention	FALSE	canonical	3	32	junction_3	98.2937773547576	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	6	True	NA	16	True	AATAAA	-17	NA	125200541	125234000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_94915.nnic	chr9	+	1195	6	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	0	-158	intron_retention	FALSE	canonical	3	42	junction_3	103.186045568187	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	6	True	NA	16	True	AATAAA	-17	NA	125200541	125234000	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
transcript_9492.known	chr1	+	1827	11	FSM	ENSG00000117625.14	ENST00000452621.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	25.2430188368983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTTATGTTTTTGT	3	True	NA	13	True	AATAAA	-23	NA	211259387	211313298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
transcript_94932.known	chr9	-	3921	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_5	448.228394769398	3379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCTGATGTCTATA	-4	True	NA	-8	True	ATTAAA	-15	NA	125241343	125234852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_94936.known	chr9	-	4028	7	FSM	ENSG00000044574.9	ENST00000681544.1	4028	7	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_4	483.934482480153	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	1	True	NA	-15	True	ATTAAA	-8	NA	125241368	125234859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239534_125240171_125240310_125240675_125240908_125241004
transcript_94937.known	chr9	-	4052	7	FSM	ENSG00000044574.9	ENST00000679355.1	4052	7	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_4	483.315085862445	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	1	True	NA	-15	True	ATTAAA	-8	NA	125241368	125234859	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125237155_125238140_125238309_125238589_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_9494.known	chr1	+	4246	11	FSM	ENSG00000117625.14	ENST00000367005.8	4246	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	18.8703471086252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTAATGTAGGCCT	11	True	NA	7	True	AATAAA	-18	NA	211259974	211316385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
transcript_94943.nic	chr9	+	3154	17	NIC	ENSG00000165219.23	novel	5207	27	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	29.8242246336766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAACAAGAAA	-1	True	NA	NA	False	NA	NA	NA	125261818	125342234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218
transcript_94946.known	chr9	+	3720	16	FSM	ENSG00000165219.23	ENST00000497580.5	3720	16	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_12	48.1788335267677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGAGAGCTGCTTTC	-26	True	NA	NA	False	NA	NA	NA	125261793	125341864	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332018_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_94947.known	chr9	-	3369	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_4	173.088426261796	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-3	True	NA	NA	False	AATAAA	-18	NA	125707208	125437393	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_94948.known	chr9	-	3252	11	FSM	ENSG00000119487.17	ENST00000373511.6	3252	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	271.295429375432	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATATTGTGTTGAGT	-26	False	NA	NA	False	AATAAA	-19	NA	125707231	125437392	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_94949.known	chr9	-	1586	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	291.531144413878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-26	False	NA	0	True	AATAAA	-22	NA	125707231	125521467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_94950.known	chr9	+	2840	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	39.9898424603048	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	5	True	NA	NA	False	AATAAA	-22	NA	125747372	125967377	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_94951.known	chr9	+	950	7	FSM	ENSG00000167081.18	ENST00000373492.6	950	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	60.5211166086314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCACACTTTTCCC	43	False	NA	NA	False	NA	NA	NA	125747453	125965923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_125747654_125748549_125748624_125929654_125929846_125935471_125935608_125960683_125960850_125963011_125963102_125965830
transcript_94952.known	chr9	+	5940	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	1	True	NA	18	True	AATAAA	-24	NA	126805039	126838210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_126805133_126808792_126808916_126832486
transcript_94954.known	chr9	+	710	2	FSM	ENSG00000169155.10	ENST00000450858.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTCGTCCACAGAGC	-6	True	NA	NA	False	NA	NA	NA	126805032	126833096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_126805133_126832486
transcript_94959.known	chr9	+	869	4	FSM	ENSG00000136828.19	ENST00000480993.1	869	4	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	57.0788927713213	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAGCATAT	1	True	NA	NA	False	NA	NA	NA	126915449	126978306	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_126915477_126962224_126962347_126965843_126965952_126977694
transcript_94960.known	chr9	-	3443	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	8.31790237980706	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATGTATCTACACTCT	-2	True	NA	-15	True	AATAAA	-15	NA	127122635	127087347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
transcript_94965.known	chr9	+	1763	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_1	63.4211707394241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	-2	True	NA	NA	False	NA	NA	NA	127397137	127407855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_94966.known	chr9	+	914	7	FSM	ENSG00000136856.18	ENST00000373352.5	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	89.6358373271167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCAAGCCCAGAGCCC	-2	True	NA	NA	False	NA	NA	NA	127397225	127407291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127397287_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_94969.known	chr9	+	2078	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.83282518435822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACGCTCAGCTCTCCA	-33	True	NA	16	True	AATAAA	-24	NA	127424381	127445372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_9497.nic	chr1	+	1648	10	ISM	ENSG00000117625.14	ENST00000452621.6	1827	11	560	0	1	0	3prime_fragment	FALSE	canonical	3	146	junction_4	19.8910613338669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTTATGTTTTTGT	-16	True	NA	13	True	AATAAA	-23	NA	211259947	211313298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
transcript_94971.known	chr9	+	2192	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.13557004763649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	NA	False	NA	15	True	AATAAA	-23	NA	127424373	127445371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_94974.known	chr9	-	864	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_6	3665.5844463514	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-2	True	NA	-10	True	AATAAA	-23	NA	127451405	127447673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
transcript_94983.known	chr9	-	634	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	0	0	0	multi-exon	FALSE	canonical	3	3317	junction_1	2225.11862355446	12492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-3	True	NA	-10	True	AATAAA	-23	NA	127451406	127447673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
transcript_94984.known	chr9	-	2275	4	FSM	ENSG00000197958.13	ENST00000497322.1	2275	4	0	0	0	0	multi-exon	FALSE	canonical	3	9099	junction_3	315.246288197375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGATTTTCTGGTGTGGC	-2	True	NA	-16	True	AATAAA	-17	NA	127451405	127447679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447990_127448336_127448424_127449280_127449363_127449609
transcript_94985.known	chr9	-	499	6	FSM	ENSG00000197958.13	ENST00000536368.1	499	6	0	0	0	0	multi-exon	FALSE	canonical	2	210	junction_4	3794.59373319464	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTCTGGTGTGGCGTC	60	False	NA	-13	True	AATAAA	-20	NA	127451373	127447676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127450730_127450805_127451280
transcript_94986.known	chr9	+	3185	27	FSM	ENSG00000148356.15	ENST00000676170.1	3185	27	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_15	44.2021311971138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTTCAGTGCGCTTC	-7	True	NA	8	True	NA	NA	NA	127451509	127503483	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482732_127482814_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_94987.known	chr9	+	3120	26	FSM	ENSG00000148356.15	ENST00000300417.11	3120	26	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	19.7251514569597	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-7	True	NA	24	True	AATAAA	-16	NA	127451509	127503499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_94988.known	chr9	+	3026	25	FSM	ENSG00000148356.15	ENST00000675572.1	3026	25	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_21	35.5805034003487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-12	True	NA	24	True	AATAAA	-16	NA	127451504	127503499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_94989.known	chr9	+	3376	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	17.6729057379431	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-4	True	NA	24	True	AATAAA	-16	NA	127451512	127503499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_9499.known	chr1	+	1022	7	FSM	ENSG00000117625.14	ENST00000529572.5	1022	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	74.0577852460871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTGATTATGATCCCA	-17	True	NA	NA	False	AAGAAA	-20	NA	211259946	211279276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211260165_211271231_211271310_211271527_211271875_211274209_211274263_211276256_211276419_211278116_211278242_211279237
transcript_94990.known	chr9	+	3754	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	23.3679637194827	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	6	True	NA	10	True	AATAAA	-20	NA	127612276	127692699	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
transcript_94993.nic	chr9	-	1482	4	ISM	ENSG00000160404.18	ENST00000373284.10	1500	5	570	3	551	0	3prime_fragment	FALSE	canonical	3	54	junction_3	16.8193010820572	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGTTGCTAAGACT	584	False	NA	-11	True	AATAAA	-16	NA	127734724	127731526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298
transcript_94997.known	chr9	+	2483	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.2354805892498	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGAG	-27	True	NA	NA	False	AGTAAA	-16	NA	127786033	127790792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
transcript_95.known	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_2006_6057
transcript_95000.known	chr9	+	560	3	FSM	ENSG00000136877.15	ENST00000475270.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTGGAGCCCGCACT	2772	False	NA	NA	False	NA	NA	NA	127809993	127813574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_127810107_127810944_127811012_127813194
transcript_95001.nnic	chr9	-	2086	11	NNC	ENSG00000106991.14	novel	2946	15	NA	NA	-1177	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	4.86723740945518	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	-1	True	NA	-2	True	AATAAA	-17	NA	127825582	127815015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825450
transcript_95005.known	chr9	-	2192	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	19.3168032782055	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATCTATTGAAAGAAG	-2	True	NA	NA	False	AATAAA	-19	NA	127877675	127866485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
transcript_95006.nic	chr9	-	992	7	ISM	ENSG00000257524.6	ENST00000646171.1	1947	13	14198	-23	39	9	3prime_fragment	FALSE	canonical	2	10	junction_6	135.964966893028	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTTTTACTGCTTTT	9189	False	NA	-20	True	ACTAAA	-15	NA	127885393	127867840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127885185
transcript_95008.known	chr9	-	2448	7	FSM	ENSG00000160408.16	ENST00000373142.5	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	151.201208842904	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	8	True	NA	-17	True	AATAAA	-16	NA	127899646	127885321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886785_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_95009.known	chr9	-	2357	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	135.652333395174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	16	True	NA	-21	True	AATAAA	-12	NA	127899574	127885325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_95014.known	chr9	-	2406	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	88.1421579041494	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-1	True	NA	-17	True	AATAAA	-16	NA	127899655	127885321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_95016.known	chr9	-	505	5	FSM	ENSG00000160408.16	ENST00000463086.5	505	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	174.345024305255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGAGCCCAAGGGGCCG	-3	True	NA	NA	False	NA	NA	NA	127899593	127886753	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886789_127887483_127887592_127894511_127894692_127896241_127896333_127899502
transcript_95019.known	chr9	-	2378	6	FSM	ENSG00000160408.16	ENST00000622357.5	2378	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	164.801699020368	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	-1	True	NA	-16	True	AATAAA	-17	NA	127905330	127885320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127905206
transcript_95022.nnic	chr9	-	1565	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.6838198206216	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-32	True	NA	-10	True	NA	NA	NA	127917049	127907885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_95024.nnic	chr9	-	1593	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.1586372311777	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-32	True	NA	-10	True	NA	NA	NA	127917049	127907885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127908169_127908317_127908582_127909950_127910087_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_95025.nnic	chr9	-	2035	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.1470548308917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-32	True	NA	-10	True	NA	NA	NA	127917049	127907885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127908169_127908317_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_95027.nnic	chr9	-	1670	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_1	37.2812136187771	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-32	True	NA	-10	True	NA	NA	NA	127917049	127907885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127908172_127908215_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_95029.nnic	chr9	-	1470	6	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.2881473985986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-24	True	NA	-10	True	NA	NA	NA	127917041	127907885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_9503.known	chr1	+	3976	11	FSM	ENSG00000082512.15	ENST00000261464.10	3976	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	24.3918019014586	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGTGATTTTTGTTTT	15	True	NA	25	True	AGTAAA	-22	NA	211326832	211374946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
transcript_95033.nnic	chr9	-	1457	6	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.7936799261772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-32	True	NA	-10	True	NA	NA	NA	127917049	127907885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_127908169_127908317_127908582_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_95036.known	chr9	-	1706	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	16.4146276229466	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-24	True	NA	-10	True	NA	NA	NA	127917041	127907885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_95040.known	chr9	-	1013	5	FSM	ENSG00000136840.19	ENST00000361444.3	1013	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	38.0878917767839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAAGAAGAGGCCCA	21	True	NA	NA	False	NA	NA	NA	127916996	127908446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_95049.known	chr9	-	1104	5	FSM	ENSG00000167103.12	ENST00000300432.3	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	18.9340962287615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	7920	False	NA	-6	True	AATAAA	-20	NA	127927491	127921528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
transcript_95050.nic	chr9	-	1596	5	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	31	0	intron_retention	FALSE	canonical	3	16	junction_2	31.2609980646812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	7985	False	NA	-8	True	ATTAAA	-19	NA	127927426	127920880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152_127927209_127927296
transcript_95052.nic	chr9	-	948	5	NIC	ENSG00000167103.12	novel	1104	5	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	31.2609980646812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	7985	False	NA	-6	True	AATAAA	-20	NA	127927426	127921528	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152_127927209_127927296
transcript_95056.nic	chr9	-	1773	4	ISM	ENSG00000167103.12	ENST00000300432.3	1104	5	67	-648	33	0	intron_retention	FALSE	canonical	3	46	junction_2	17.8200885394982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	7987	False	NA	-8	True	ATTAAA	-19	NA	127927424	127920880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152
transcript_95057.known	chr9	-	535	4	FSM	ENSG00000167103.12	ENST00000495448.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	31.4783876475414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCCGGGCCCGGGCATC	8225	False	NA	NA	False	NA	NA	NA	127927186	127921789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152
transcript_95058.nic	chr9	-	1651	4	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	21	junction_2	31.1376870617513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	9996	False	NA	-8	True	ATTAAA	-19	NA	127927503	127920880	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127922115_127925106_127925261_127927152_127927209_127927296
transcript_95064.known	chr9	-	912	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	257.294902138901	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-13	True	NA	-9	True	AATAAA	-16	NA	127937854	127935098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
transcript_95065.nnic	chr9	-	834	3	NIC	ENSG00000136908.18	novel	912	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	547	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-25	True	NA	-9	True	AATAAA	-16	NA	127937866	127935098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_127935781_127936552_127936656_127937817
transcript_95066.known	chr9	-	1662	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_2	311.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	15	True	NA	-9	True	AATAAA	-16	NA	127937826	127935098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_127935781_127936552_127937524_127937817
transcript_95067.known	chr9	+	3474	10	FSM	ENSG00000148339.13	ENST00000373064.9	3474	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	22.4438943826986	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	6476	False	NA	12	True	AATAAA	-17	NA	128098303	128109245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128098726_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_95068.nic	chr9	-	1854	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	10	True	NA	-1	True	ATTAAA	-24	NA	128067323	128061232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128061827_128063373_128063901_128066590
transcript_95071.nic	chr9	-	1500	7	NIC	ENSG00000148334.16	novel	1614	8	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_2	488.382847319145	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-23	True	NA	-1	True	AATAAA	-42	NA	128128440	128120692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128247
transcript_95074.known	chr9	+	2100	1	FSM	ENSG00000232850.3	ENST00000443493.3	2100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGCCTGACCATGCTA	NA	False	NA	NA	False	AATAAA	-22	NA	128128528	128130628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128128500_128130600
transcript_95075.nnic	chr9	+	590	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-695	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	4.17612260356422	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	4	True	NA	4	True	AATAAA	-15	NA	128150804	128153453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_128150923_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_95077.nnic	chr9	+	598	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-633	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	4.81663783151692	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	6	False	NA	4	True	AATAAA	-15	NA	128150866	128153453	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_128150993_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_95083.known	chr9	+	573	3	FSM	ENSG00000171159.5	ENST00000489240.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCGGCAGACACGCCT	37	False	NA	NA	False	NA	NA	NA	128160358	128163546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128160487_128162003_128162345_128163442
transcript_95084.known	chr9	+	1570	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGTGTCCACATTAA	-8	True	NA	-20	True	NA	NA	NA	128160313	128163890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128160487_128162003_128162953_128163442
transcript_95086.known	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	-5	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128160487_128163442
transcript_95088.known	chr9	-	5426	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	36.1657183486443	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTCATTGTCTTT	-16	True	NA	-26	True	ATTAAA	-7	NA	128322447	128305158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
transcript_9509.known	chr1	+	681	6	FSM	ENSG00000153363.14	ENST00000657539.1	681	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	26.6007518690732	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	15	True	NA	9	True	AATAAA	-15	NA	211382829	211432535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432320
transcript_95096.known	chr9	+	466	5	FSM	ENSG00000175854.14	ENST00000495313.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	92.5337776166087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACAGCTCCCAGGGAC	14	True	NA	NA	False	NA	NA	NA	128275378	128288733	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128275497_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_95097.known	chr9	+	906	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	86.9522138878591	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	857	False	NA	18	True	AATAAA	-18	NA	128276221	128288990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
transcript_95098.known	chr9	+	763	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	24.963723680573	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	-24	True	NA	17	True	AATAAA	-17	NA	128276243	128288989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_95099.known	chr9	+	1048	4	FSM	ENSG00000175854.14	ENST00000419867.7	1048	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	92.4493855517109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTACAAACCCTTCAGTT	-26	True	NA	NA	False	NA	NA	NA	128276241	128286534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938
transcript_9510.known	chr1	+	1671	5	FSM	ENSG00000153363.14	ENST00000664255.1	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	26.3912864407933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTACTCTGTCCCTT	NA	False	NA	NA	False	TTTAAA	-6	NA	211382735	211399219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035
transcript_95103.known	chr9	-	428	2	FSM	ENSG00000167110.19	ENST00000490628.3	462	2	34	0	8	0	multi-exon	FALSE	canonical	3	75	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAGTTTAAATGAGA	45	False	NA	1	True	TATAAA	-18	NA	128275987	128273639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128273973_128275892
transcript_95106.known	chr9	+	781	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	-16	True	NA	20	True	AATAAA	-25	NA	128322581	128323584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128322929_128323015_128323148_128323282
transcript_95107.known	chr9	+	1245	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.1541289588513	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	0	True	NA	24	True	AATAAA	-18	NA	128322838	128334072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
transcript_95108.known	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	12.4621649626201	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	3	True	NA	7	True	NA	NA	NA	128340526	128361470	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_9511.known	chr1	+	784	6	FSM	ENSG00000153363.14	ENST00000669618.1	784	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	26.2251787410496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTGTTCTACTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	211382756	211432290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432045
transcript_95114.known	chr9	+	2595	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	49.3931928508373	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCTTTAATGAAAAG	11	True	NA	17	True	AATAAA	-26	NA	128371373	128392016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
transcript_95116.known	chr9	+	723	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	210.979264383967	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCAGCCCCAGAGCCAG	-2	True	NA	NA	False	NA	NA	NA	128371360	128390090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
transcript_95117.known	chr9	+	803	4	FSM	ENSG00000167118.11	ENST00000483206.2	803	4	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	42.6796855137846	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAAAAGAGGCCAGGTG	12	True	NA	NA	False	NA	NA	NA	128371374	128389869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260
transcript_9512.known	chr1	+	1115	4	FSM	ENSG00000153363.14	ENST00000662409.1	1115	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	8.25967446224258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGCTCCTTCTCA	-25	True	NA	NA	False	ATTAAA	-15	NA	211382789	211397513	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766
transcript_95121.known	chr9	+	3045	3	FSM	ENSG00000167118.11	ENST00000372850.5	3045	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	46	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	-2	True	NA	18	True	AATAAA	-19	NA	128371360	128390734	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128371416_128378035_128378107_128387815
transcript_95126.known	chr9	+	3899	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	-76	-32	0	0	multi-exon	FALSE	canonical	3	40	junction_4	15.6501597435937	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	822	False	NA	34	True	NA	NA	NA	128456005	128501292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_9513.known	chr1	+	469	3	FSM	ENSG00000153363.14	ENST00000610948.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	39.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	7328	False	NA	8	True	AATAAA	-14	NA	211399257	211432534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_211399438_211426210_211426284_211432318
transcript_95135.known	chr9	+	3373	17	FSM	ENSG00000119392.16	ENST00000683748.1	3373	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	35.3816248213674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGGTTTTTTGAAAAA	8616	False	NA	12	True	NA	NA	NA	128504654	128542268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128532664_128532692_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_95136.known	chr9	+	3600	17	FSM	ENSG00000119392.16	ENST00000683288.1	3600	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	31.4010723343965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATCTAGCAAGAGAT	16	True	NA	NA	False	NA	NA	NA	128504736	128542479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128504905_128507215_128507341_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_95138.known	chr9	+	3302	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.19903376568552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	-2	True	NA	32	True	AATAAA	-19	NA	128504718	128542288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_9514.known	chr1	-	1318	8	FSM	ENSG00000117650.13	ENST00000540251.5	1318	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	67.0220798220517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCCTCGTAGGCTCAA	-4	True	NA	NA	False	NA	NA	NA	211675630	211658656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_211658713_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_95140.known	chr9	+	3060	13	FSM	ENSG00000119392.16	ENST00000684139.1	3060	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	30.8368241267194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAGACACAATAGGCC	5	True	NA	NA	False	ATTAAA	-4	NA	128504725	128542518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_95141.known	chr9	-	822	4	FSM	ENSG00000228395.2	ENST00000434999.2	822	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATCCTAATAATTTGC	-5	True	NA	NA	False	AGTAAA	-19	NA	128552410	128528656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128529001_128536826_128536956_128543378_128543685_128552367
transcript_95144.nnic	chr9	-	1596	9	NNC	ENSG00000119333.12	novel	1823	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	228.138526996209	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-3	True	NA	-9	True	AAGAAA	-19	NA	128656704	128633652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635176_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_95145.known	chr9	-	1823	9	FSM	ENSG00000119333.12	ENST00000372715.7	1823	9	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_6	51.3710460765595	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-9	True	AAGAAA	-19	NA	128656847	128633652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_95153.nnic	chr9	-	1570	8	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	258.612230403525	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-3	True	NA	-9	True	AAGAAA	-19	NA	128656704	128633652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_95157.nic	chr9	+	1801	5	ISM	ENSG00000197694.18	ENST00000625282.2	4102	25	-3	23113	0	1567	5prime_fragment	FALSE	canonical	0	0	junction_4	139.495519641313	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTCGTCAGTCTAAAG	-3	True	NA	NA	False	AAAAAG	-8	NA	128552586	128576382	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198
transcript_9516.nic	chr1	-	2139	8	NIC	ENSG00000117650.13	novel	2134	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	56.7964500184112	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	NA	False	NA	0	True	AATAAA	-23	NA	211675650	211662771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_211663629_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_95161.known	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4802	junction_1	830.220255998002	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	-23	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_95164.known	chr9	+	1029	8	FSM	ENSG00000119335.18	ENST00000372686.6	1043	8	14	0	14	0	multi-exon	FALSE	canonical	1	29	junction_1	2402.17924019854	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCCTTCCTGTCTGAAC	5	True	NA	44	True	AATACA	-43	NA	128689988	128694894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128690027_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_95168.known	chr9	+	2850	8	FSM	ENSG00000119335.18	ENST00000372692.8	2850	8	0	0	0	0	multi-exon	FALSE	canonical	3	2179	junction_1	1670.65604857884	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTCTCCTTGTTTTAT	4	False	NA	23	True	AATAAA	-28	NA	128683654	128696400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128684008_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_95169.known	chr9	-	444	3	FSM	ENSG00000234705.3	ENST00000652876.2	463	3	16	3	16	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAGGTTCAATCTGGA	-7	True	NA	NA	False	AATAAA	-18	NA	128684477	128663133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128663401_128663511_128663577_128684365
transcript_9517.known	chr1	-	2134	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	20.6081022307009	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	5	True	NA	0	True	AATAAA	-23	NA	211675621	211662771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_95173.known	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	74.1834718788491	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-16	True	NA	-16	True	TATAAA	-22	NA	128724127	128720872	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_95175.nic	chr9	-	1146	5	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	194.333476272103	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAACCATATCAC	7055	False	NA	-23	True	TATAAA	-15	NA	128724156	128720879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_95178.nic	chr9	-	1321	4	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	504	junction_1	21.8225164044439	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAACCATATCACTCCTT	7055	False	NA	-18	True	TATAAA	-20	NA	128724156	128720874	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128721818_128722008_128722087_128722437_128722575_128723993
transcript_95179.known	chr9	-	2536	4	FSM	ENSG00000160446.19	ENST00000467312.1	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	208.61500958038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAACCATATCAC	-16	True	NA	-23	True	TATAAA	-15	NA	128724127	128720879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437
transcript_95182.nnic	chr9	+	427	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	-12	True	NA	11	True	AATAAA	-20	NA	128724438	128733194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_128724483_128724605_128724636_128732841
transcript_95183.nnic	chr9	+	731	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGAGGGCCCTGATGCT	-12	True	NA	7	True	AATAAA	-16	NA	128724438	128733190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_128724636_128730063_128730249_128732841
transcript_95187.known	chr9	+	544	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	10	5	10	-5	multi-exon	FALSE	canonical	3	35	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	-6	True	NA	11	True	AATAAA	-20	NA	128724444	128733194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128724636_128732841
transcript_9519.known	chr1	-	1865	7	FSM	ENSG00000117650.13	ENST00000366998.4	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	15.0738920727934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATATTGCCATGCC	69	False	NA	NA	False	AATAAA	-1	NA	211675557	211666429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_95190.known	chr9	+	3855	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_8	17.5414503202798	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	-33	True	NA	19	True	AATAAA	-22	NA	128787252	128810430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_95199.known	chr9	-	1971	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_8	22.8587146036984	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-3	True	NA	-5	True	AATGAA	-15	NA	128881950	128832941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_95206.known	chr9	-	2089	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	45.3378521032187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	22	True	NA	-5	True	AATGAA	-15	NA	128882036	128832941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_95210.known	chr9	-	4259	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	63.0100346199708	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTTGAATTATCCTGAA	6	True	NA	NA	False	AATAAA	-17	NA	128829794	128819650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_95214.known	chr9	-	1623	12	FSM	ENSG00000171097.14	ENST00000320665.10	1623	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	50.4819745262219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATTGACGGCTTCTCT	18	True	NA	-6	True	AATAAA	-19	NA	128881929	128833118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128842653_128842802_128845352_128845412_128881896
transcript_95219.nic	chr9	-	1700	11	NIC	ENSG00000198917.13	novel	4259	12	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	133.755747540059	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAACGCTGCTAGGAGA	NA	False	NA	-39	True	NA	NA	NA	128829823	128822090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_128822834_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_9522.known	chr1	-	4430	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.070231019185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCCTTTTTCTCT	-21	True	NA	-6	True	AATAAA	-17	NA	212035557	211940402	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_95226.known	chr9	-	898	3	FSM	ENSG00000198917.13	ENST00000467582.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	209.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAACGCTGCTAGGAGA	4978	False	NA	-39	True	NA	NA	NA	128824822	128822090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128822834_128824071_128824175_128824770
transcript_95227.known	chr9	+	5689	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_1	80.3864382116191	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	-6	True	NA	31	True	ATTAAA	-17	NA	128947698	129007096	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_95230.known	chr9	+	2047	13	FSM	ENSG00000175287.19	ENST00000372592.8	2047	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.5514138607183	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	-7	True	NA	21	True	AATAAA	-18	NA	128920981	128942038	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
transcript_95236.known	chr9	-	1365	12	FSM	ENSG00000148341.18	ENST00000372559.5	1365	12	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_1	186.11286898009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-1	True	NA	-5	True	AATAAA	-21	NA	129028214	129008033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129008151_129008683_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_95241.known	chr9	-	3013	11	FSM	ENSG00000148341.18	ENST00000372564.8	3013	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	71.1924153263534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGTGTGGAAAACAGG	-18	True	NA	3	True	TATAAA	-29	NA	129028331	129007035	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_95248.known	chr9	-	2794	6	FSM	ENSG00000148341.18	ENST00000479237.5	2794	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	300.642911108844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTGTGGAGCGGACT	NA	False	NA	-17	True	AAAAAG	-10	NA	129012016	129007791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129008792_129009105_129009347_129009452_129009468_129009770_129009872_129010119_129010210_129010669
transcript_95249.known	chr9	-	2074	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGTTTTGCTGATATA	6	True	NA	-7	True	AATAAA	-17	NA	128947603	128945529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_128945500_128947600
transcript_95250.known	chr9	-	497	1	FSM	ENSG00000267834.1	ENST00000594418.1	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGATTATGGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	129004998	129004501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129004500_129005000
transcript_95254.known	chr9	+	3610	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_13	26.2182294511959	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	-1	True	NA	28	True	AATAAA	-23	NA	129036625	129072082	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
transcript_95257.known	chr9	-	411	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACGTCTATGCTACTTAA	NA	False	NA	-5	True	AATAAA	-15	NA	129080765	129080354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129080400_129080800
transcript_95260.known	chr9	+	2169	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	13.4786301005612	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	-6	True	NA	16	True	AATAAA	-17	NA	129081110	129090438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_95261.known	chr9	+	2037	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	95.130465969402	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	-6	True	NA	13	True	AATAAA	-14	NA	129081110	129090435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_95264.known	chr9	-	2768	14	FSM	ENSG00000095321.18	ENST00000318080.7	2768	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	8.60576385904431	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-64	True	NA	-1	True	AATAAA	-20	NA	129110793	129094793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
transcript_95266.known	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	196.123456016867	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	-2	True	NA	24	True	ATTAAA	-20	NA	129110949	129148944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_95267.known	chr9	+	2746	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	233.713071949346	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	10	True	NA	25	True	ATTAAA	-21	NA	129111412	129148945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_95269.known	chr9	+	2640	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	61.9856614244151	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	12	True	NA	26	True	ATTAAA	-22	NA	129111414	129148946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_95271.known	chr9	+	2737	10	FSM	ENSG00000119383.21	ENST00000348141.9	2737	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	188.777025699895	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	8	True	NA	26	True	ATTAAA	-22	NA	129111335	129148946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120629_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_95273.known	chr9	+	2515	9	FSM	ENSG00000119383.21	ENST00000355007.7	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	218.340867395456	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	11	True	NA	26	True	ATTAAA	-22	NA	129111413	129148946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_95274.known	chr9	+	2653	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	204.63439196528	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	-14	True	NA	25	True	ATTAAA	-21	NA	129111313	129148945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_95279.known	chr9	+	988	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	335.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTCGGGTGGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	129139381	129147998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_9528.nic	chr1	-	2704	17	ISM	ENSG00000143493.13	ENST00000366993.7	3422	20	-9	10941	-6	138	5prime_fragment	FALSE	canonical	3	141	junction_2	23.1718275876116	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTTGCAATAATTCTC	-9	True	NA	NA	False	AATAAA	-26	NA	212035545	211952288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_95280.known	chr9	+	1153	3	FSM	ENSG00000119383.21	ENST00000414510.5	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	305	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAGAAACTCAGGGAG	1	True	NA	NA	False	NA	NA	NA	129140007	129148287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129140152_129142444_129142553_129147386
transcript_95281.known	chr9	+	857	3	FSM	ENSG00000119383.21	ENST00000432651.5	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	332	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGGAGAGGCCTTAG	159	False	NA	NA	False	NA	NA	NA	129141953	129148006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129142083_129142444_129142553_129147386
transcript_95282.known	chr9	+	870	3	FSM	ENSG00000119383.21	ENST00000434095.2	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGGGTCGGGTGGTGG	-1	True	NA	NA	False	NA	NA	NA	129142024	129147995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129142178_129142444_129142553_129147386
transcript_95283.known	chr9	+	2526	10	FSM	ENSG00000119383.21	ENST00000452489.6	2526	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	205.033330623747	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	104	False	NA	25	True	ATTAAA	-21	NA	129111687	129148945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129111792_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_95288.known	chr9	+	1112	4	FSM	ENSG00000233901.7	ENST00000654735.1	1112	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.2659863237109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	1363	False	NA	24	True	ATTAAA	-29	NA	129333772	129347477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129334199_129338791_129338918_129341735_129342044_129347225
transcript_95289.known	chr9	+	902	4	FSM	ENSG00000233901.7	ENST00000654190.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	19	False	NA	24	True	ATTAAA	-29	NA	129333886	129347477	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129347225
transcript_95290.known	chr9	+	2226	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	3	0	3	0	multi-exon	FALSE	canonical	2	4	junction_1	4.54606056566195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTTTGTGTATTGAG	1069	False	NA	NA	False	AAGAAA	-44	NA	129336878	129348907	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
transcript_95291.known	chr9	+	640	4	FSM	ENSG00000233901.7	ENST00000444125.3	643	4	0	3	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTTCAGCATTTC	0	True	NA	8	True	ATTAAA	-13	NA	129336922	129347461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129336989_129338791_129338918_129341831_129342044_129347225
transcript_95292.known	chr9	-	4603	6	FSM	ENSG00000148331.12	ENST00000277458.5	4603	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	18.3782480122562	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTTTGAATGCAGTAAG	-18	True	NA	-9	True	AATAAA	-16	NA	129642151	129634604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129638458_129638572_129638660_129639201_129639311_129639401_129639509_129640540_129640723_129641886
transcript_95297.known	chr9	+	576	4	FSM	ENSG00000148335.15	ENST00000481189.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	225.767333529209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCGCCCCAACGGCAT	3	True	NA	NA	False	NA	NA	NA	129626174	129635257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626296_129632649_129632802_129634053_129634307_129635207
transcript_95299.known	chr9	+	741	4	FSM	ENSG00000148335.15	ENST00000372481.7	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	198.247320284538	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAAACTGAGGAAC	33	False	NA	NA	False	GGGGCT	-1	NA	129626204	129635473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626296_129632649_129632866_129634053_129634222_129635207
transcript_95300.known	chr9	+	1530	4	FSM	ENSG00000148335.15	ENST00000372483.9	1530	4	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_3	41.5237549147741	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTGGGAGGCCGAGGC	-9	True	NA	NA	False	AATAAA	-38	NA	129626162	129636135	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626296_129632649_129632866_129634053_129634307_129635207
transcript_95305.known	chr9	+	1562	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	233.51802214533	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	-19	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
transcript_95309.known	chr9	+	1072	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	212.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTGCTGTGGGGTG	28	False	NA	NA	False	NA	NA	NA	129626199	129635930	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626296_129634053_129634307_129635207
transcript_95312.known	chr9	+	1346	3	FSM	ENSG00000148335.15	ENST00000617943.4	1346	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	250.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	-19	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626322_129634053_129634307_129635207
transcript_95313.known	chr9	+	1123	2	FSM	ENSG00000148335.15	ENST00000459968.6	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCATGGTGGCGC	28	False	NA	NA	False	AATACA	-13	NA	129626199	129633676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129626296_129632649
transcript_95314.known	chr9	-	1751	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCAGCACCTCGTC	-1	True	NA	-20	True	ATTAAA	-16	NA	129753042	129738348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129739861_129748654_129748738_129752886
transcript_95317.known	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	198.322968916866	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-10	True	NA	-2	True	AATAAA	-16	NA	129824136	129812941	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_95322.known	chr9	+	4293	26	FSM	ENSG00000136878.14	ENST00000372429.8	4293	26	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	20.6481379305738	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	-2	True	NA	13	True	AATAAA	-16	NA	129835457	129881828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
transcript_95323.known	chr9	+	4371	26	FSM	ENSG00000136878.14	ENST00000358355.5	4371	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.728142471934	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	18	False	NA	13	True	AATAAA	-16	NA	129835477	129881828	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_129835598_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
transcript_95327.known	chr9	-	1795	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	78.4098805954964	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGTTTGTATTATGT	-2	True	NA	NA	False	ATTAAA	-18	NA	129835275	129827289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_95329.nnic	chr9	-	1803	9	NNC	ENSG00000136819.15	novel	1795	9	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	198.07412596046	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGTTTGTATTATGT	-8	False	NA	NA	False	ATTAAA	-18	NA	129835314	129827289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_129828253_129829235_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_9533.known	chr1	+	4409	15	FSM	ENSG00000143476.18	ENST00000366991.5	4409	15	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_9	31.7972691678171	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGCATTTAAGATGGC	-12	True	NA	8	True	AATAAA	-22	NA	212035747	212105013	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_95337.known	chr9	-	783	6	FSM	ENSG00000136819.15	ENST00000461349.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	209.20936881507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAAAGTTAGCCAGGC	19	True	NA	NA	False	NA	NA	NA	129835254	129827967	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129830962_129834711_129834767_129835138
transcript_95343.known	chr9	+	6991	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	25.7293606605372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGATGCAGGGAG	11	False	NA	25	True	AATAAA	-21	NA	130053705	130140169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_95345.known	chr9	+	6729	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	23.8166293566078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	-11	True	NA	20	True	AATAAA	-16	NA	130053905	130140164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_95349.known	chr9	+	5164	8	FSM	ENSG00000107130.10	ENST00000372398.6	5164	8	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	29.5241167418732	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTGGGCCTGTTG	22	True	NA	13	True	ATTAAA	-25	NA	130172403	130237303	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130172728_130200957_130200983_130217831_130217971_130219724_130219804_130222649_130222739_130223081_130223160_130226388_130226505_130232989
transcript_95351.known	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	206.695868904587	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	27	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_95354.known	chr9	+	1532	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	61.0327780786685	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	0	True	NA	30	True	ATTAAA	-25	NA	130444960	130501274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_95363.known	chr9	+	1973	16	FSM	ENSG00000130707.18	ENST00000372394.5	1973	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213.87300489361	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	1	True	NA	30	True	ATTAAA	-25	NA	130444961	130501274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130444996_130451601_130452044_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_95365.known	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	TRUE	canonical	3	520	junction_16	63.1792472569167	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	-18	True	NA	47	True	AATAAA	-31	NA	130579576	130638352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_95366.nnic	chr9	+	3020	18	NIC	ENSG00000107164.16	novel	3153	19	NA	NA	57	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_16	142.094880334589	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	43	False	NA	47	True	AATAAA	-31	NA	130579637	130638352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130635998_130636127_130637013
transcript_95367.known	chr9	+	2228	2	FSM	ENSG00000107164.16	ENST00000467100.1	2228	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGAAGTCTAGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	130578964	130582086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130579765_130580658
transcript_9537.known	chr1	+	4471	14	FSM	ENSG00000143476.18	ENST00000542077.5	4471	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	111.431938523374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGACTTTGAGCATTTA	61	False	NA	1	True	AATAAA	-15	NA	212035552	212105006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_95374.known	chr9	+	2012	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_7	16.2860177759942	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	7	True	NA	14	True	NA	NA	NA	130693779	130704892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_95382.known	chr9	+	1956	8	FSM	ENSG00000130713.17	ENST00000546165.6	1928	8	-20	-8	4	2	multi-exon	FALSE	canonical	2	2	junction_5	68.0039014487029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAAAAATGGTGCCC	-13	True	NA	16	True	NA	NA	NA	130693759	130704894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130702142_130702311_130703052_130703182_130703693
transcript_95385.known	chr9	+	1885	8	FSM	ENSG00000130713.17	ENST00000372351.7	1885	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	67.4939150696459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	13	True	NA	-17	True	GATAAA	-27	NA	130693785	130704861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_95394.known	chr9	+	5578	11	FSM	ENSG00000097007.19	ENST00000318560.6	5578	11	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	31.1899022120942	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCAGATTGCTTCGG	-14	True	NA	23	True	AATAAA	-19	NA	130835253	130887675	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_130835526_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
transcript_95395.known	chr9	-	449	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	15.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	8359	False	NA	-2	True	AATAAA	-16	NA	130939139	130938016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_130938216_130938535_130938649_130939002
transcript_95397.known	chr9	+	3515	7	FSM	ENSG00000126878.13	ENST00000372309.7	3515	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	610.171742672139	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTGGTGTATTTTGGGG	NA	False	NA	21	True	AATAAA	-22	NA	131096475	131123152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131096661_131096801_131096864_131106187_131106266_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_95401.known	chr9	+	3374	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_5	35.9366108585659	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	-1	True	NA	13	True	AATAAA	-14	NA	131096530	131123144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_95404.known	chr9	+	3398	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	464.278106311293	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	-2	True	NA	14	True	AATAAA	-15	NA	131096529	131123145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_95408.nic	chr9	+	1856	11	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-155	18286	-2	1802	5prime_fragment	FALSE	canonical	3	159	junction_8	17.5396693241349	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATTCTTTGTGATCTT	-34	True	NA	NA	False	AATACA	-19	NA	131125583	131141151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548
transcript_95411.nic	chr9	+	2487	8	ISM	ENSG00000126883.18	ENST00000483497.6	3275	11	7377	-1	160	0	3prime_fragment	FALSE	canonical	3	191	junction_3	20.0956894555494	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTATGTGGGTTTTTTC	3834	False	NA	10	True	ATTAAA	-18	NA	131197497	131233704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
transcript_95412.nic	chr9	+	952	7	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-155	26228	-2	0	5prime_fragment	FALSE	canonical	3	161	junction_5	16.8465294810402	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCTGTGGAAGAAATT	-34	True	NA	3	True	NA	NA	NA	131125583	131133209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105
transcript_95413.known	chr9	+	2065	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	11	True	NA	22	True	AATACA	-18	NA	131289722	131309261	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131290449_131307922
transcript_95414.known	chr9	+	972	2	FSM	ENSG00000160539.6	ENST00000372261.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTCTGGAGGCTCTA	0	True	NA	NA	False	AATAAA	-22	NA	131289811	131291445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131290449_131291110
transcript_95415.known	chr9	+	3057	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	29.6243330394667	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	-48	True	NA	14	True	ATTAAA	-17	NA	131502917	131523799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95417.known	chr9	+	3252	20	FSM	ENSG00000130714.19	ENST00000372228.9	3252	20	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_8	40.8625152475294	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	NA	False	NA	14	True	ATTAAA	-17	NA	131502788	131523799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510063_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95419.known	chr9	+	3309	20	FSM	ENSG00000130714.19	ENST00000676640.1	3309	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	39.0563907965119	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	NA	False	NA	14	True	ATTAAA	-17	NA	131502905	131523799	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503314_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95420.known	chr9	+	2935	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.1166002545924	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	NA	False	NA	21	True	ATTAAA	-24	NA	131502894	131523806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95425.known	chr9	+	2461	18	FSM	ENSG00000130714.19	ENST00000677216.1	2461	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.5627156756944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGCTAACTGCTGCAG	NA	False	NA	NA	False	NA	NA	NA	131502897	131523442	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_95428.known	chr9	+	2213	17	FSM	ENSG00000130714.19	ENST00000677029.1	2213	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	45.2106182218293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAGCGTAGGAGTCAT	-46	True	NA	34	True	NA	NA	NA	131502919	131523363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_131503074_131506402_131506454_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_9543.nic	chr1	+	2028	5	ISM	ENSG00000143476.18	ENST00000366991.5	4409	15	-18	56189	-18	-51602	5prime_fragment	FALSE	canonical	3	412	junction_4	32.6840939908084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTCTGTTTTAAAAATCA	-30	True	NA	NA	False	ACTAAA	-11	NA	212035729	212048824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296
transcript_95432.known	chr9	-	788	7	FSM	ENSG00000130717.13	ENST00000494584.5	788	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	166.727988718818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGGGCGGAGCTACAA	-9	True	NA	NA	False	NA	NA	NA	131531264	131525147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529557_131530485_131530646_131531066
transcript_95433.known	chr9	-	2162	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	39.4785455096253	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-8	True	NA	-4	True	AATAAA	-21	NA	131531263	131523800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_95434.known	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	175.594624696265	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	20	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
transcript_95435.nic	chr9	-	2131	7	NIC	ENSG00000130717.13	novel	2237	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	177.411949992102	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	9	True	NA	-4	True	AATAAA	-21	NA	131531190	131523800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531066
transcript_95439.known	chr9	-	2063	6	FSM	ENSG00000130717.13	ENST00000372208.7	2063	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	199.419758298921	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-4	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_95442.known	chr9	-	2114	7	FSM	ENSG00000130717.13	ENST00000372211.7	2114	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	184.32617526789	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	131531200	131523800	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531093
transcript_95444.known	chr9	-	1385	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	15.094261647854	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGCTTTGTCTCCTGT	-1	True	NA	-7	True	AATAAA	-15	NA	132079867	131860111	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_95445.known	chr9	-	1281	7	FSM	ENSG00000160563.14	ENST00000357028.6	1281	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	152.876493360563	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGTCTCCTGTTTGTT	0	True	NA	-2	True	AATAAA	-20	NA	132079866	131860106	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_9545.nnic	chr1	+	1417	3	NNC	ENSG00000143476.18	novel	4471	14	NA	NA	-18	-1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTGGGGTTTTTTT	-30	True	NA	23	True	AATACA	-15	NA	212035729	212103436	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212035803_212100335_212101085_212102841
transcript_95450.known	chr9	-	2042	4	FSM	ENSG00000160563.14	ENST00000651555.1	2042	4	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	16.4181471413663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGCCTCCAGAGGTTG	10	False	NA	NA	False	TATAAA	-28	NA	132079856	131937923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_131939475_132014336_132014468_132077441_132077587_132079641
transcript_95451.known	chr9	-	762	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	210	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGAATTTTTAATTT	0	True	NA	NA	False	AATAAA	-15	NA	132079866	132073350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132073743_132077441_132077587_132079641
transcript_95452.known	chr9	-	11101	26	FSM	ENSG00000107290.14	ENST00000224140.6	11101	26	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_21	20.2118381153224	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGCCCTCCTTCCTAGC	-6	True	NA	83	True	TATAAA	-16	NA	132354986	132261355	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132264986_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
transcript_95456.known	chr9	-	3143	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	22.1494920934996	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-10	True	NA	64	True	ATTAAA	-42	NA	132406840	132375547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
transcript_95459.known	chr9	-	1780	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	45.0777106783386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-21	True	NA	64	True	ATTAAA	-42	NA	132406851	132375547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
transcript_9546.nnic	chr1	+	2826	3	NNC	ENSG00000143476.18	novel	4471	14	NA	NA	-18	-161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTCCTTTTCTGAGC	-30	True	NA	14	True	AATAAA	-14	NA	212035729	212104845	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212035803_212100335_212101085_212102841
transcript_95465.known	chr9	-	2814	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-44	1389	-44	-1389	multi-exon	FALSE	canonical	3	52	junction_3	17.6063448648885	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATCACTAATTATT	-15	True	NA	-25	True	AAAAAG	-5	NA	132670027	132594385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_95469.known	chr9	-	1333	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	36.3428886517783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTGAGTCTGTG	1	False	NA	-1	True	AATAAA	-24	NA	132670401	132658080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_9547.known	chr1	-	483	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	817	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	39	False	NA	NA	False	NA	NA	NA	212052006	212051523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212051500_212052000
transcript_95470.known	chr9	+	8612	5	FSM	ENSG00000125484.12	ENST00000372146.5	8612	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	11.8110118110177	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCGTGTCTGTTTTATG	-30	True	NA	13	True	AATAAA	-18	NA	132670463	132694953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_132670956_132677976_132679804_132683562_132683694_132687238_132687328_132688880
transcript_95473.known	chr9	-	1579	13	FSM	ENSG00000165695.10	ENST00000298545.4	1579	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.03026742978125	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTACGTCCTGAAGGTG	-3	True	NA	NA	False	AATAAA	-16	NA	132878284	132725577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132725926_132727453_132727535_132792633_132792776_132814637_132814728_132823204_132823337_132826853_132827055_132828012_132828085_132828644_132828727_132854856_132854926_132863664_132863779_132866903_132866954_132875114_132875200_132878171
transcript_95476.nic	chr9	+	705	5	NIC	ENSG00000165698.16	novel	2536	4	NA	NA	311	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	3.39116499156263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGACTTGGTTTC	3	True	NA	4	True	AATAAA	-16	NA	132878337	132890030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_132878437_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_95477.known	chr9	+	894	5	FSM	ENSG00000165698.16	ENST00000350499.6	894	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3.56195171219375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGAGGACCAGCAATCA	-16	True	NA	NA	False	NA	NA	NA	132878897	132890201	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_132879015_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_95478.known	chr9	-	8715	23	FSM	ENSG00000165699.15	ENST00000644097.1	8715	23	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	29.9127173816928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	619	False	NA	-6	True	AATAAA	-16	NA	132944769	132891352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_9548.known	chr1	+	3245	13	FSM	ENSG00000066027.12	ENST00000261461.7	3245	13	0	0	0	0	multi-exon	TRUE	canonical	3	198	junction_1	22.1790379011855	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTTATGTCATCTTT	-6	True	NA	14	True	AATAAA	-14	NA	212285409	212361853	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212286292_212329134_212329332_212333496_212333599_212342187_212342281_212345802_212345934_212347346_212347407_212348388_212348498_212349188_212349243_212356625_212356677_212356949_212357070_212357156_212357285_212358685_212358788_212360637
transcript_95482.known	chr9	-	1787	12	FSM	ENSG00000165699.15	ENST00000647462.1	1787	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.2375595072173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACGATCATGGCTCACTG	-1	True	NA	NA	False	NA	NA	NA	132944616	132910260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_95483.known	chr9	-	2299	12	FSM	ENSG00000165699.15	ENST00000642745.1	2299	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	26.8897350533558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAACATGTATGTGTAA	-1	True	NA	51	True	ATTAAA	-10	NA	132944616	132909751	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_95486.known	chr9	-	2232	12	FSM	ENSG00000165699.15	ENST00000645150.1	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	26.4002880024361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	755	False	NA	-4	True	AATAAA	-19	NA	132944633	132909806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_95487.known	chr9	-	1717	10	FSM	ENSG00000165699.15	ENST00000403810.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	23.1420732769464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCTTAGGTTGGATT	755	False	NA	NA	False	AGTAAA	-20	NA	132944633	132910998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_95488.known	chr9	+	2110	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	160.067599356136	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	6	True	NA	25	True	ATTAAA	-14	NA	133031003	133058501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
transcript_95493.known	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_8	52.4329095130148	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	-1	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_95495.nic	chr9	+	2131	11	NIC	ENSG00000148308.18	novel	1999	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	142.636636247494	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	-15	True	NA	27	True	ATTAAA	-16	NA	133030709	133058503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133030911_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_95499.known	chr9	+	1999	9	FSM	ENSG00000148308.18	ENST00000372099.10	1999	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	171.331139536863	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030674	133058501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133031165_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_955.known	chr1	+	2018	8	FSM	ENSG00000157191.20	ENST00000337132.10	2018	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_4	35.860273056315	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATGTGAAAGATGAATG	-5	True	NA	11	True	AATAAA	-18	NA	16440723	16460078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_95500.nic	chr9	+	1087	3	ISM	ENSG00000148308.18	ENST00000372097.10	2098	11	-265	14342	21	-246	5prime_fragment	FALSE	canonical	3	483	junction_1	27	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAATGGGATG	7	True	NA	NA	False	NA	NA	NA	133030731	133044161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_133031165_133042086_133042307_133043727
transcript_95504.known	chr9	-	1954	7	FSM	ENSG00000148288.13	ENST00000372040.9	1954	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.74926894959167	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGGGTGATTTTTTTTGT	-5	True	NA	-20	True	AATAAA	-22	NA	133163914	133152947	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_95506.nic	chr9	-	265	2	ISM	ENSG00000148296.7	ENST00000372022.6	4235	5	-72	5783	-72	-2753	5prime_fragment	FALSE	canonical	3	352	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGAAAACACAAA	5642	False	NA	NA	False	NA	NA	NA	133336260	133334558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_133334602_133336038
transcript_95507.known	chr9	-	4235	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	0	0	0	multi-exon	TRUE	canonical	3	337	junction_3	18.2397231338636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGATTTAATTCAG	5	True	NA	NA	False	AATAAA	-18	NA	133336188	133328775	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
transcript_95508.known	chr9	-	4044	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	113.19755960267	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAGAAATTA	-42	True	NA	NA	False	NA	NA	NA	133348131	133338311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
transcript_95509.nic	chr9	-	1410	5	NIC	ENSG00000148297.16	novel	4044	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	160.318433126076	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-21	True	NA	-9	True	ATTAAA	-20	NA	133348110	133340904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347941
transcript_9551.known	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	17.8279761805393	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-17	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_95510.known	chr9	-	3867	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	15.1070255914995	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-28	True	NA	-9	True	ATTAAA	-20	NA	133348117	133340904	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
transcript_95511.known	chr9	-	561	4	FSM	ENSG00000148297.16	ENST00000457204.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	169.393690030716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGACCGGAAGCTCATCAC	-42	True	NA	NA	False	NA	NA	NA	133348131	133344204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347941
transcript_95512.known	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	1753.5977245628	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	-1	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_9552.nnic	chr1	-	1817	8	NNC	ENSG00000065600.13	novel	2119	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	47.6976018735722	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAGTGTGACAATATGAA	-36	True	NA	-12	True	AATAAA	-16	NA	212414905	212364475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414844
transcript_95520.known	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	926.621204777258	21232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_95521.known	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	972.771470250507	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
transcript_95522.known	chr9	+	966	7	FSM	ENSG00000148303.17	ENST00000489392.1	966	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1968.05196972935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTACATAAAAATAATTGA	636	False	NA	-17	True	ACTAAA	-29	NA	133348936	133351385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133349043_133349386_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_95523.known	chr9	-	991	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	190.997275330496	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-14	True	NA	-1	True	TATAAA	-25	NA	133356485	133351804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
transcript_95526.known	chr9	+	833	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_5	50.7290843599606	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	-19	True	NA	16	True	AATAAA	-16	NA	133356549	133361158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_95528.nic	chr9	+	965	6	NIC	ENSG00000148291.10	novel	833	6	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_2	235.109846667467	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	6	False	NA	16	True	AATAAA	-16	NA	133356531	133361158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133356671_133356913_133357183_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_95529.nic	chr9	+	1017	6	NIC	ENSG00000148291.10	novel	833	6	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	236.285420625141	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	6	False	NA	16	True	AATAAA	-16	NA	133356531	133361158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_133356671_133356913_133357235_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_95535.known	chr9	-	2930	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_2	34.424409944108	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATCCTATAGCG	0	True	NA	-15	True	AATAAA	-18	NA	133376060	133361463	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_95538.nnic	chr9	-	1965	8	NNC	ENSG00000148300.12	novel	2326	8	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_7	99.7210394765604	125	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGGAGGCTCAG	-1	True	NA	-37	True	AATAAA	-20	NA	133418042	133406061	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133418012
transcript_95539.nic	chr9	+	658	3	ISM	ENSG00000160323.19	ENST00000371910.1	1074	5	1012	0	1012	0	3prime_fragment	FALSE	canonical	3	33	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCGTTTTTTTCTTATAA	NA	False	NA	13	True	AATAAA	-18	NA	133456659	133459386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_133456720_133457909_133458095_133458973
transcript_95540.known	chr9	+	689	6	FSM	ENSG00000160325.15	ENST00000474734.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	39.9879981994598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCGCGGAGACCCTGG	-10	True	NA	NA	False	NA	NA	NA	133459986	133468619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133460188_133463482_133463556_133465034_133465159_133465321_133465448_133467920_133468029_133468562
transcript_95541.known	chr9	+	2803	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	10.4880884817015	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	-19	True	NA	104	True	NA	NA	NA	133459977	133470848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
transcript_95542.known	chr9	+	2688	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	29.743346594939	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	NA	False	NA	104	True	NA	NA	NA	133459966	133470848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
transcript_95543.known	chr9	-	2491	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	40.4557371291967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCGAGGAAAGAGTG	-1	True	NA	-15	True	AATAAA	-16	NA	133479099	133471093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_95548.known	chr9	-	2301	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.6920851810221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTAGCGAGGAAAGAGT	2	True	NA	-16	True	AATAAA	-15	NA	133479096	133471094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_95554.known	chr9	-	3215	21	FSM	ENSG00000123453.19	ENST00000439388.6	3215	21	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_7	6.79613860953409	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGAAGCAAATAGGCTTC	-8	True	NA	-20	True	AGTAAA	-25	NA	133738352	133663559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133685192_133685287_133690379_133690528_133694257_133694372_133696222_133696362_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734204_133738253
transcript_95556.known	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	37.3535708627481	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-4	True	NA	37	True	AATAAA	-26	NA	134068026	134030304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_95559.known	chr9	+	5682	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	-4	True	NA	NA	False	ATTAAA	-17	NA	134025480	134031587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_134025537_134025844_134026091_134026207
transcript_9556.nnic	chr1	-	1837	7	NIC	ENSG00000065600.13	novel	2119	9	NA	NA	-7	2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	50.4328486427469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGTGTGACAATATGAATA	-39	True	NA	-10	True	AATAAA	-18	NA	212414908	212364473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_212365377_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_95560.known	chr9	+	3157	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	33.7596797427251	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	-6	True	NA	23	True	AATAAA	-19	NA	134136081	134159968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
transcript_95565.nic	chr9	+	693	4	NIC	ENSG00000130558.20	novel	1057	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	130.222885853447	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTTCTGAGGACTGT	-5	True	NA	13	True	AATAAA	-17	NA	135087667	135098107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_135087728_135090194_135090345_135095863_135096020_135097780
transcript_95566.known	chr9	+	854	4	FSM	ENSG00000122140.11	ENST00000472852.1	854	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	270.091753956976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGACGACTCTCCGCTGG	22	False	NA	NA	False	NA	NA	NA	135500714	135503955	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_135500754_135500997_135501124_135501698_135501974_135503541
transcript_95567.known	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	42.5910788780937	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	-11	True	NA	12	True	AATAAA	-22	NA	135500681	135504671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
transcript_95568.known	chr9	-	675	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	6.5	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	1	True	NA	-1	True	ATTAAA	-19	NA	135499869	135495180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_135495616_135498584_135498664_135499708
transcript_95585.known	chr9	-	1860	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_3	40.205337155687	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTTCGTCTTTTC	-18	True	NA	-7	True	AATAAA	-14	NA	135961373	135932968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_9559.nnic	chr1	-	1798	7	NIC	ENSG00000065600.13	novel	2119	9	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	50.7589619892115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAGTGTGACAATATGAA	-39	True	NA	-12	True	AATAAA	-16	NA	212414908	212364475	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_212365377_212375192_212375301_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_95590.nic	chr9	-	426	3	ISM	ENSG00000165684.6	ENST00000682081.1	2257	10	-42	5800	-36	-3683	5prime_fragment	FALSE	canonical	3	43	junction_2	21.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCCCCAGAAATAACCAC	-6	True	NA	3	True	ATTAAA	-19	NA	136400212	136396815	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_136397024_136398298_136398438_136400133
transcript_95594.known	chr9	+	2086	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_6	100.902145941281	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	-3	True	NA	27	True	AATAAA	-19	NA	136410657	136423761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_95597.nic	chr9	+	2670	12	NIC	ENSG00000165688.12	novel	2086	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	930	junction_6	77.1695567945532	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	NA	False	NA	27	True	AATAAA	-19	NA	136410632	136423761	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_956.known	chr1	+	1929	7	FSM	ENSG00000157191.20	ENST00000443980.6	1929	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	152.545894733356	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	7	True	NA	10	True	AATAAA	-17	NA	16440735	16460077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16458841
transcript_95602.known	chr9	+	416	3	FSM	ENSG00000165688.12	ENST00000619192.4	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_2	56	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGATGTTTGAGATTT	0	True	NA	NA	False	NA	NA	NA	136410643	136412606	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136410740_136411996_136412200_136412489
transcript_95604.known	chr9	+	1282	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	125.708927188963	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	12	True	NA	11	True	AATAAA	-13	NA	136665791	136672678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
transcript_95617.known	chr9	-	1995	6	FSM	ENSG00000187922.14	ENST00000497771.6	1995	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.85657137141714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	0	True	NA	NA	False	AATAAA	-21	NA	136742940	136738169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136739554_136739949_136740049_136740835_136740944_136741251_136741362_136741880_136742021_136742786
transcript_95618.known	chr9	-	443	4	FSM	ENSG00000187922.14	ENST00000532006.1	443	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	5564	False	NA	NA	False	NA	NA	NA	136742959	136739460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136739554_136739949_136740049_136741880_136741959_136742786
transcript_95619.known	chr9	-	1780	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.24721912892465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	0	True	NA	NA	False	AATAAA	-24	NA	136742940	136738166	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
transcript_95620.nnic	chr9	-	1700	3	NIC	ENSG00000187922.14	novel	1995	6	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	5520	False	NA	NA	False	AATAAA	-21	NA	136743003	136738169	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_136739554_136739949_136740049_136742786
transcript_95623.known	chr9	+	1580	8	FSM	ENSG00000196642.19	ENST00000371671.9	1580	8	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_7	218.247846378789	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	8	True	NA	20	True	AATAAA	-15	NA	136807942	136834340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136833719
transcript_95625.known	chr9	+	735	6	FSM	ENSG00000272896.1	ENST00000456614.2	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.296944775949	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCTGACCACCGGCT	23	True	NA	NA	False	NA	NA	NA	136791378	136800595	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136799101_136799224_136800001_136800170_136800388
transcript_95626.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	67.2997028225237	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	-12	True	NA	42	True	AAAACA	-30	NA	136791343	136793317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
transcript_95627.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	215.650759330914	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	12	True	NA	-19	True	AATAAA	-19	NA	136791367	136793256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
transcript_95629.known	chr9	+	551	4	FSM	ENSG00000244187.8	ENST00000489739.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	71.2600870052795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCTGGAACACAGCCT	48	False	NA	NA	False	NA	NA	NA	136791403	136792869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791710_136791778_136791946_136792359_136792818
transcript_95632.known	chr9	+	683	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	254.467199370676	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	16	True	NA	-19	True	AATAAA	-19	NA	136791371	136793256	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
transcript_95634.known	chr9	+	491	4	FSM	ENSG00000244187.8	ENST00000479737.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	291.218512842543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGCCGACCCTCCCCA	23	True	NA	NA	False	NA	NA	NA	136791378	136792902	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136791425_136791777_136792031_136792250_136792359_136792818
transcript_95642.known	chr9	+	577	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	2758	junction_2	84	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	-5	True	NA	15	True	ATTAAA	-15	NA	136849408	136851024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136849591_136850012_136850138_136850754
transcript_95643.known	chr9	+	627	2	FSM	ENSG00000054148.18	ENST00000463215.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	2758	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	42	False	NA	13	True	ATTAAA	-13	NA	136849778	136851022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136850138_136850754
transcript_95644.known	chr9	+	618	4	FSM	ENSG00000054148.18	ENST00000497413.1	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	1270.81006536076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCTGAACTCTGTCCT	12	True	NA	18	True	ATTAAA	-18	NA	136849425	136851027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136849591_136850012_136850138_136850505_136850561_136850754
transcript_95647.known	chr9	-	662	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	2059	junction_1	198.308314248294	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-3	True	NA	-15	True	NA	NA	NA	136866308	136862118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_95649.known	chr9	-	790	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	886.712291276037	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-3	True	NA	-15	True	NA	NA	NA	136866285	136862118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_9565.known	chr1	-	836	3	FSM	ENSG00000123685.9	ENST00000243440.2	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCGTCTTCTGTCTTCT	-7	True	NA	-1	True	AATACA	-16	NA	212699840	212686416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212686980_212696960_212697066_212699672
transcript_95651.known	chr9	-	809	4	FSM	ENSG00000107223.13	ENST00000371648.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	2435	junction_3	59.3314606446042	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGAGTGCTCGTGTGC	4	True	NA	NA	False	NA	NA	NA	136866266	136862489	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136863000_136863287_136863449_136863819_136863872_136866180
transcript_95653.nnic	chr9	+	2621	14	NNC	ENSG00000127191.18	novel	2266	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	114.447838303341	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	9	True	NA	12	True	ATTAAA	-14	NA	136886515	136926607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_136886542_136889468_136889563_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_95658.known	chr9	+	2266	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	50.5787504788325	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	9	True	NA	12	True	ATTAAA	-14	NA	136886515	136926607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_9566.known	chr1	-	790	7	FSM	ENSG00000117697.15	ENST00000626725.1	790	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	185.176867405792	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGAACTTTATAACAC	4	True	NA	NA	False	NA	NA	NA	212791776	212738561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212738687_212739533_212739602_212766188_212766274_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_95664.known	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_8	72.455913319756	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	1	True	NA	-1	True	AATAAA	-16	NA	136944738	136940434	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_95667.known	chr9	+	881	7	FSM	ENSG00000176919.13	ENST00000371634.7	881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTCTTCTGTCCACT	-2	True	NA	NA	False	ATTAAA	-15	NA	136945242	136946975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136945459_136945633_136945771_136945928_136946000_136946084_136946193_136946464_136946567_136946650_136946690_136946767
transcript_95668.known	chr9	+	754	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	9.93176721434811	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	640	False	NA	-39	True	NA	NA	NA	136978811	136981692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_95670.known	chr9	+	812	7	FSM	ENSG00000107317.13	ENST00000371625.8	812	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	33.0928827527746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGGCTCCTGGCTGTCT	-1	True	NA	11	True	AATAAA	-20	NA	136977503	136981742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136977693_136978992_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_95672.known	chr9	+	808	7	FSM	ENSG00000148362.11	ENST00000371620.4	808	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	72.8432487529825	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-6	True	NA	23	True	AATAAA	-18	NA	136992421	136993976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95673.nnic	chr9	+	771	7	NNC	ENSG00000148362.11	novel	808	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	135.983352739305	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-9	True	NA	23	True	AATAAA	-18	NA	136992418	136993976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_136992563_136992639_136992701_136992924_136992975_136993092_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95674.nic	chr9	+	889	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	236	junction_2	74.9015353647707	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-9	True	NA	23	True	AATAAA	-18	NA	136992418	136993976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_136992563_136992639_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95675.nnic	chr9	+	765	6	NNC	ENSG00000148362.11	novel	808	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	158.78488593062	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-9	True	NA	23	True	AATAAA	-18	NA	136992418	136993976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_+_136992563_136992639_136992705_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95676.known	chr9	+	958	6	FSM	ENSG00000148362.11	ENST00000493968.5	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_2	58.3218655394356	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGCTCTGGTGGGGCT	63	False	NA	18	True	AATAAA	-13	NA	136992490	136993971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992639_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_9568.known	chr1	-	13115	6	FSM	ENSG00000117697.15	ENST00000366977.8	13115	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	26.2526189169766	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	3	True	NA	0	True	AATAAA	-23	NA	212791777	212726152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212738687_212739533_212739602_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_95680.known	chr9	+	1077	5	FSM	ENSG00000148362.11	ENST00000498095.4	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	48.2804308182932	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	35	False	NA	31	True	AATAAA	-26	NA	136992462	136993984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992639_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95681.known	chr9	+	705	5	FSM	ENSG00000148362.11	ENST00000483807.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	171.938942651163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCGCCACCACCTCCAC	19	True	NA	-72	True	NA	NA	NA	136992446	136993881	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_136992563_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_95684.known	chr9	+	2707	13	FSM	ENSG00000177239.16	ENST00000371589.9	2707	13	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.0844861344913	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	10	True	NA	24	True	GATAAA	-17	NA	137086984	137109183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_95686.known	chr9	+	2755	13	FSM	ENSG00000177239.16	ENST00000683135.1	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	88.1247537427607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAACCGCGATGTCGC	984	False	NA	16	True	GATAAA	-9	NA	137086903	137109175	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
transcript_95687.known	chr9	+	2919	13	FSM	ENSG00000177239.16	ENST00000682425.1	2919	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	90.0313217102186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAAGTTGATTTGCTC	-10	True	NA	1	True	NA	NA	NA	137086964	137109160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088399_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_95688.known	chr9	+	2792	12	FSM	ENSG00000177239.16	ENST00000684229.1	2792	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.865101066039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATAAAAGTTGATTTG	-18	True	NA	-2	True	NA	NA	NA	137086956	137109157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107663_137108387
transcript_95692.known	chr9	+	2698	13	FSM	ENSG00000177239.16	ENST00000682881.1	2698	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	89.8011305917445	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTGTCTTTAGGG	937	False	NA	30	True	GATAAA	-23	NA	137086856	137109189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108530
transcript_95693.known	chr9	+	2526	12	FSM	ENSG00000177239.16	ENST00000684366.1	2526	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	92.7552542451512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAAAAGTTGATTTGCT	-24	True	NA	0	True	NA	NA	NA	137086950	137109159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_95696.known	chr9	-	1601	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	20.7337620534453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-16	True	NA	-6	True	AATAAA	-17	NA	137114733	137110545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_95698.nnic	chr9	-	1729	13	NNC	ENSG00000176978.14	novel	1601	13	NA	NA	-14551	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_12	44.3082635884349	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-3	True	NA	-6	True	AATAAA	-17	NA	137129728	137110545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137129513
transcript_95702.known	chr9	-	2655	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	13.0647426304539	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	2	True	NA	-1	True	ATTAAA	-16	NA	137188560	137174783	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_95703.known	chr9	+	723	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	337	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	-10	True	NA	18	True	AATAAA	-20	NA	137188705	137190370	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137188779_137189065_137189152_137189806
transcript_95704.known	chr9	+	863	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	120.5	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	5	True	NA	14	True	AATAAA	-16	NA	137188675	137190366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137188779_137189065_137189266_137189806
transcript_95707.known	chr9	-	1567	1	FSM	ENSG00000187713.7	ENST00000343666.6	1567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTGGTTGCCTGTAA	-2	True	NA	NA	False	AATAAA	-23	NA	137205648	137204081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137204100_137205600
transcript_95708.known	chr9	+	762	2	FSM	ENSG00000197191.6	ENST00000650725.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTTTGCTGCAGGCTC	-1	True	NA	11	True	AATAAA	-25	NA	137225173	137226315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137225234_137225613
transcript_95709.known	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_1	40.2326567189723	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	0	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
transcript_95710.known	chr9	+	2035	3	FSM	ENSG00000188229.6	ENST00000604929.1	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_1	20	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTTTCGCTTTGCCCA	1	True	NA	20	True	ATTAAA	-14	NA	137241287	137243706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137241418_137241720_137241830_137241910
transcript_95712.known	chr9	-	962	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	7.21958786771044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	27	True	NA	-3	True	AATAAA	-14	NA	137423155	137366144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_95713.nic	chr9	-	1125	7	ISM	ENSG00000187609.16	ENST00000340951.9	2781	22	-25	59249	24	0	5prime_fragment	FALSE	canonical	3	50	junction_6	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-5	True	NA	-3	True	AATAAA	-14	NA	137423187	137366144	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_-_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_95715.known	chr9	-	1585	3	FSM	ENSG00000187609.16	ENST00000465160.2	1585	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	22	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGCAGTTGAGGTCAG	20	True	NA	-18	True	AATAAA	-21	NA	137423162	137391801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137393236_137395302_137395405_137423113
transcript_95718.known	chr9	-	2302	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_7	46.0970443737991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGACAACCAGTTACAG	-30	True	NA	NA	False	AATAAA	-19	NA	137578925	137554443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_95719.nnic	chr9	-	1493	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	89.0003439571432	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	300	False	NA	-13	True	ATTAAA	-18	NA	137578595	137554903	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137578509
transcript_95721.known	chr9	-	1395	6	FSM	ENSG00000165724.6	ENST00000298585.3	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_5	39.5049364004044	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTCTCGGACATTCT	-7	True	NA	-23	True	AGTAAA	-13	NA	137590512	137582080	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137582687_137582982_137583164_137586966_137587108_137587716_137587824_137588658_137588719_137590212
transcript_95723.nic	chr9	+	1616	8	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	86.8902662405113	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	19	False	NA	16	True	AATAAA	-17	NA	137605672	137615360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr9_+_137605836_137612895_137613007_137613412_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_95728.known	chr9	+	1556	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_7	18.087090897733	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	0	True	NA	16	True	AATAAA	-17	NA	137605685	137615360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_95729.nic	chr9	+	1641	7	ISM	ENSG00000197070.14	ENST00000371421.9	1556	8	-13	1	-12	0	intron_retention	FALSE	canonical	3	246	junction_2	14.3759057685652	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	19	False	NA	15	True	AATAAA	-16	NA	137605672	137615359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_95734.known	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	112	junction_2	26	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	19	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr9_-_137616200_137617933_137618192_137618530
transcript_95735.known	chrM	+	71	1	FSM	ENSG00000210049.1	ENST00000387314.1	71	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGTTTGGTCCTAGCCT	17	False	NA	NA	False	CATAAA	-3	NA	576	647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_600_600
transcript_95736.known	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-4	True	NA	NA	False	NA	NA	NA	647	1601	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_600_1600
transcript_95737.known	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-2	True	NA	NA	False	NA	NA	NA	1670	3229	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_1700_3200
transcript_95738.known	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	-4	True	NA	NA	False	NA	NA	NA	3306	4262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_3300_4300
transcript_95739.known	chrM	-	72	1	FSM	ENSG00000210107.1	ENST00000387372.1	72	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGGGGTTTAAGCTC	6	True	NA	NA	False	NA	NA	NA	4400	4328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_-_4300_4400
transcript_95740.known	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	17	True	NA	NA	False	NA	NA	NA	4469	5511	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_4500_5500
transcript_95741.known	chrM	+	1542	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	1	True	NA	NA	False	CATAAA	-8	NA	5903	7445	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_5900_7400
transcript_95742.known	chrM	+	684	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCTCTACCCCCTCTA	-2	True	NA	NA	False	NA	NA	NA	7585	8269	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_7600_8300
transcript_95743.known	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	2	True	NA	NA	False	AATGAA	-42	NA	8365	8572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_8400_8600
transcript_95744.known	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	682	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	21	False	NA	NA	False	NA	NA	NA	8526	9207	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_8500_9200
transcript_95745.known	chrM	+	784	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	709	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	1	True	NA	NA	False	NA	NA	NA	9206	9990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_9200_10000
transcript_95746.known	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	-4	True	NA	NA	False	AAAAAG	-19	NA	10058	10404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_10100_10400
transcript_95747.known	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-2	True	NA	NA	False	NA	NA	NA	10469	10766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_10500_10800
transcript_95748.known	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-4	True	NA	NA	False	NA	NA	NA	10759	12137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_10800_12100
transcript_95749.known	chrM	+	59	1	FSM	ENSG00000210184.1	ENST00000387449.1	59	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTAAAGGATAACAGCT	-1	True	NA	NA	False	NA	NA	NA	12206	12265	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_12200_12300
transcript_9575.known	chr1	-	1344	5	FSM	ENSG00000117697.15	ENST00000366978.5	1344	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183.296719828807	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	199	False	NA	0	True	AATAAA	-23	NA	212791581	212726152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212727180_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_95750.known	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	-2	True	NA	NA	False	NA	NA	NA	12336	14148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_12300_14100
transcript_95751.known	chrM	-	525	1	FSM	ENSG00000198695.2	ENST00000361681.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATTAGGAGTAGGG	-1	True	NA	NA	False	NA	NA	NA	14673	14148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_-_14100_14700
transcript_95752.known	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	-7	True	NA	NA	False	AAAACA	-19	NA	14746	15887	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrM_+_14700_15900
transcript_95755.nnic	chrX	+	1885	8	NNC	ENSG00000182378.15	novel	5287	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	108.988859194743	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	NA	False	NA	15	True	AATAAA	-21	NA	276323	303356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_276395_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_95756.nnic	chrX	+	1715	8	NNC	ENSG00000182378.15	novel	5287	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	126.844593973918	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	NA	False	NA	15	True	AATAAA	-21	NA	276323	303356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_276395_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299459_302828
transcript_95759.nnic	chrX	+	2149	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_7	73.2270720542113	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	4990	False	NA	15	True	AATAAA	-21	NA	281349	303356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_95760.nnic	chrX	+	1957	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.962778322608	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	-22	True	NA	15	True	AATAAA	-21	NA	281371	303356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299459_302828
transcript_95768.nic	chrX	+	1796	7	NIC	ENSG00000182378.15	novel	5287	8	NA	NA	0	-3286	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	99.6872888364186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGATGGGGTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	276323	300067	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_276395_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_9577.known	chr1	-	722	5	FSM	ENSG00000117697.15	ENST00000366976.3	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	169.116084391757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGCAAACTAAAGACTG	-2	True	NA	NA	False	NA	NA	NA	212791782	212738482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212738687_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_95770.known	chrX	+	5318	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	13.5574907543968	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	-13	True	NA	15	True	AATAAA	-21	NA	281380	303356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_95774.nic	chrX	+	1358	6	ISM	ENSG00000182378.15	ENST00000381657.8	5318	7	-34	9872	-34	1845	5prime_fragment	FALSE	canonical	3	270	junction_1	14.3024473430249	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTGGTTCATGCCTGTC	4987	False	NA	4	True	AATAAA	-15	NA	281346	293484	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034
transcript_95777.nnic	chrX	+	725	3	NNC	ENSG00000182378.15	novel	540	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	NA	False	NA	15	True	AATAAA	-21	NA	276323	303356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_276395_284166_284292_302827
transcript_95778.nnic	chrX	+	958	3	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	135	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	-13	True	NA	15	True	AATAAA	-21	NA	281380	303356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_281685_284166_284292_302827
transcript_95779.known	chrX	-	1907	10	FSM	ENSG00000178605.13	ENST00000326153.9	1907	10	0	0	0	0	multi-exon	TRUE	canonical	3	294	junction_7	32.2765824984272	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATTTCCAGTTCCTCC	4	True	NA	-5	True	ATTAAA	-22	NA	318819	304749	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_95782.nnic	chrX	+	2509	12	NNC	ENSG00000198223.17	novel	1283	10	NA	NA	-20019	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4.49425712520301	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTGGGCGCCGTGGCT	199	False	NA	6	True	AATAAA	-17	NA	1248780	1309924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_1249616_1282677_1282780_1285777_1285921_1288518_1288643_1288758_1288889_1290336_1290510_1294327_1294462_1295426_1295457_1300490_1300627_1303922_1304020_1305445_1305528_1309401
transcript_95804.known	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4519	junction_3	194.732865456473	2607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	-3	True	NA	30	True	AATAAA	-18	NA	1392113	1386151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
transcript_95809.known	chrX	-	2065	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	0	0	0	multi-exon	TRUE	canonical	1	190	junction_11	118.025303313409	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCCTCCATAGGG	-19	True	NA	-14	True	AATAAA	-16	NA	1452909	1403138	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_95814.known	chrX	-	2035	12	FSM	ENSG00000169093.16	ENST00000381333.9	2035	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	175.616882036433	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	-1	True	NA	-16	True	AATAAA	-14	NA	1452929	1403140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1442185_1442318_1452747
transcript_95815.nnic	chrX	-	2040	12	NIC	ENSG00000169093.16	novel	2065	13	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_9	197.935919173791	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	800	False	NA	-16	True	AATAAA	-14	NA	1452951	1403140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1439096_1439145_1442185_1442318_1452747
transcript_95831.nic	chrX	-	1467	8	ISM	ENSG00000169093.16	ENST00000381317.9	2065	13	-42	22090	-22	2498	5prime_fragment	FALSE	canonical	1	190	junction_6	149.72437261549	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTAGTTGCTTATTTA	800	False	NA	-3	True	NA	NA	NA	1452951	1425228	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_95841.known	chrX	-	851	2	FSM	ENSG00000169093.16	ENST00000474865.6	851	2	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAATCTCTTGTGGCCG	18	True	NA	NA	False	NA	NA	NA	1452872	1441591	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_1442318_1452747
transcript_95842.known	chrX	+	1330	9	FSM	ENSG00000196433.13	ENST00000381241.9	1330	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.47213595499958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	-2	True	NA	2	True	AATAAA	-15	NA	1615058	1643081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1632703_1632788_1633149_1633291_1636437_1636561_1642802
transcript_95843.known	chrX	+	1087	8	FSM	ENSG00000196433.13	ENST00000381229.9	1087	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.49943307086389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAACTAACGTCAAAGC	0	True	NA	-52	True	NA	NA	NA	1615163	1643027	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1633149_1633291_1636437_1636561_1642802
transcript_95844.known	chrX	+	989	7	FSM	ENSG00000196433.13	ENST00000381233.8	989	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.82970843102535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	11	False	NA	2	True	AATAAA	-15	NA	1615174	1643081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1636437_1636561_1642802
transcript_95845.nic	chrX	+	1004	6	ISM	ENSG00000196433.13	ENST00000381241.9	1330	9	19	10058	19	-3440	5prime_fragment	FALSE	canonical	0	0	junction_5	4.56070170039655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGACATGGCGGAAGG	-9	True	NA	1	True	AATAAA	-11	NA	1615077	1633023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1632703
transcript_95847.known	chrX	-	2579	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	75.9334503949932	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	-31	True	NA	NA	False	AATAAA	-30	NA	2500976	2219505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
transcript_9585.known	chr1	-	685	3	FSM	ENSG00000117697.15	ENST00000487995.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAGTTATAGTGAGT	-2	True	NA	NA	False	AATGAA	-3	NA	212791782	212784140	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212784494_212787558_212787638_212791529
transcript_95853.nnic	chrX	-	1359	2	FSM	ENSG00000289007.1	ENST00000686824.1	1371	2	7	5	7	0	multi-exon	FALSE	canonical	3	37	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTCAGGTGCACCTCT	NA	False	NA	-5	True	AATAAA	-17	NA	2609200	2566028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2567293_2609105
transcript_95855.known	chrX	+	984	10	FSM	ENSG00000223773.8	ENST00000430562.7	1030	10	46	0	2	0	multi-exon	FALSE	canonical	3	67	junction_7	13.2925301588784	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	22	True	NA	15	True	AATAAA	-16	NA	2609393	2638329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2622689_2622735_2623384_2623454_2626596_2626643_2637973
transcript_95860.known	chrX	+	573	11	FSM	ENSG00000002586.20	ENST00000623253.4	573	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	605.074673077629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTGTCGGCAGAAACAG	32	False	NA	NA	False	NA	NA	NA	2691360	2740804	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2733356_2733375_2738202_2738257_2740778
transcript_95862.known	chrX	+	1089	10	FSM	ENSG00000002586.20	ENST00000624481.4	1089	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_8	400.412287523747	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	18	False	NA	-7	True	NA	NA	NA	2691312	2741290	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738202_2738257_2740778
transcript_95866.known	chrX	+	892	9	FSM	ENSG00000002586.20	ENST00000381187.8	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	472.176079444946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCACCGAGGCACCC	0	True	NA	NA	False	NA	NA	NA	2691275	2741101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
transcript_9587.known	chr1	+	1381	10	FSM	ENSG00000203705.11	ENST00000532324.5	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	108.373268992399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAACCTCCACTTCCCA	NA	False	NA	NA	False	NA	NA	NA	212791827	212815597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812226_212812329_212815012
transcript_95870.known	chrX	+	842	9	FSM	ENSG00000002586.20	ENST00000482405.7	842	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	495.727180513637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACTTCCATGTTTTAA	15	False	NA	NA	False	TTTAAA	-23	NA	2691309	2733672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2733356
transcript_95873.known	chrX	+	3393	12	FSM	ENSG00000056998.20	ENST00000381163.7	3393	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	124.798813302262	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	8	False	NA	28	True	ATTAAA	-14	NA	2828821	2882818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2828976_2830060_2830196_2842997_2843091_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_95875.known	chrX	+	3192	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_9	58.182901268328	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	-5	True	NA	28	True	ATTAAA	-14	NA	2828929	2882818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_95878.nnic	chrX	+	3266	11	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	101.816698041137	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	32	False	NA	28	True	ATTAAA	-14	NA	2828966	2882818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_2829087_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_95880.nic	chrX	+	3118	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	108.738331288272	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	82	False	NA	28	True	ATTAAA	-14	NA	2828895	2882818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2881051
transcript_95881.nic	chrX	+	3084	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	91.9864455930302	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	82	False	NA	28	True	ATTAAA	-14	NA	2828895	2882818	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_95883.nic	chrX	+	2483	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-18	-529	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	102.022975353594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGAAGGTTTATTTCT	82	False	NA	19	True	AATAAA	-24	NA	2828895	2882288	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_95884.nic	chrX	+	3012	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	102.022975353594	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	82	False	NA	27	True	ATTAAA	-13	NA	2828895	2882817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_95889.known	chrX	-	2219	11	FSM	ENSG00000157399.17	ENST00000381134.9	2219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.6063765137773	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAACAGAGCAAGACC	1	True	NA	NA	False	NA	NA	NA	2964341	2934520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_95895.known	chrX	-	1338	6	FSM	ENSG00000157399.17	ENST00000682745.1	1338	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.3666428910958	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGACCTCCCAGACTCAA	-3	True	NA	NA	False	NA	NA	NA	2964288	2951737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_95896.nic	chrX	-	1267	6	NIC	ENSG00000157399.17	novel	1407	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	25.5734237050888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	1	True	NA	NA	False	AATAAA	-35	NA	2964341	2951909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_95899.known	chrX	-	973	5	FSM	ENSG00000157399.17	ENST00000683071.1	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	20.0670750235305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	28	True	NA	NA	False	AATAAA	-35	NA	2964257	2951909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2960377_2960421_2964223
transcript_959.known	chr1	+	572	2	FSM	ENSG00000157191.20	ENST00000486390.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTATGGCTATTTTG	7	True	NA	NA	False	ATTAAA	-29	NA	16440735	16441619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16440854_16441165
transcript_9590.known	chr1	+	2527	10	FSM	ENSG00000203705.11	ENST00000366974.9	2527	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	73.7443029814658	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTTCTTTTCCCTA	0	True	NA	NA	False	ATTAAA	-26	NA	212791893	212816830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_95904.known	chrX	-	1334	5	FSM	ENSG00000130021.15	ENST00000424830.6	1334	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	51.895929512824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATCTATCGTCTGCAT	-16	True	NA	NA	False	NA	NA	NA	7148158	7049762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7116965_7117035_7148052
transcript_95905.known	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	10.6144555520604	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	-11	True	NA	-4	True	AATAAA	-18	NA	7148153	7048919	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
transcript_95906.known	chrX	-	1376	4	FSM	ENSG00000130021.15	ENST00000412827.6	1376	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.6978400580398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTACCTGGTATCTAC	-11	True	NA	80	True	NA	NA	NA	7148153	7049517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7050473_7077219_7077450_7105748_7105839_7148052
transcript_95908.known	chrX	-	3342	7	FSM	ENSG00000006757.12	ENST00000381042.9	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	15.0268278607148	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	-6	True	NA	NA	False	ATTAAA	-17	NA	7927413	7898246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
transcript_95909.nic	chrX	-	893	7	NIC	ENSG00000006757.12	novel	2752	7	NA	NA	-23	1389	combination_of_known_junctions	FALSE	canonical	3	53	junction_6	47.0652620187	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTTAGATAGTTTTTG	NA	False	NA	-1	True	AATAAA	-26	NA	7927762	7900659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927670
transcript_95910.known	chrX	-	2752	7	FSM	ENSG00000006757.12	ENST00000444736.5	2752	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	60.1758995685888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927685
transcript_95911.nnic	chrX	-	893	7	NNC	ENSG00000006757.12	novel	3342	7	NA	NA	-7260	1389	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	64.9409988630706	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTTAGATAGTTTTTG	NA	False	NA	-1	True	AATAAA	-26	NA	7934999	7900659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7934907
transcript_95916.nic	chrX	-	1384	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-30	-67	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	42.4394789671127	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCAGCCTGACTTGGAT	NA	False	NA	-18	True	AATAAA	-15	NA	9786327	9725412	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
transcript_95921.known	chrX	+	6951	23	NIC	ENSG00000047644.20	novel	6949	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_13	16.2191219662278	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGGAAATGTGTGGCT	0	True	NA	14	True	ATTAAA	-18	NA	10015253	10144474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_10015859_10063444_10063555_10067286_10067491_10078798_10078876_10079724_10079805_10090770_10090901_10094131_10094282_10098505_10098580_10109777_10110021_10116417_10116508_10117123_10117690_10122618_10122740_10124264_10124340_10125023_10125111_10126113_10126307_10127987_10128162_10128556_10128709_10129955_10130122_10134431_10134597_10136632_10136726_10138708_10138937_10139412_10139541_10141434
transcript_95922.known	chrX	-	6168	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	17.3205080756888	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	-11	True	NA	-6	True	AATAAA	-22	NA	10620585	10445555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_95929.known	chrX	-	1071	4	FSM	ENSG00000234129.9	ENST00000433747.6	1071	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAAAAAAATTAAAATTT	25	False	NA	NA	False	TTTAAA	-20	NA	11111114	10969890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_10970539_11055935_11056037_11106900_11106991_11110882
transcript_9593.known	chr1	+	2321	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_8	76.4038975154773	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	-10	True	NA	-1	True	AATAAA	-10	NA	212791883	212816617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
transcript_95930.known	chrX	+	2312	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.2156057578013	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGAATAATTTTACA	20	True	NA	20	True	AATAAA	-27	NA	11111331	11123086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_95932.known	chrX	+	1000	7	FSM	ENSG00000004961.15	ENST00000380763.7	1000	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	138.057657037437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTGCACTCATGATGT	30	True	NA	29	True	ATTAAA	-15	NA	11111341	11121879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11111424_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_95933.known	chrX	+	2277	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	122.987465485986	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	-11	True	NA	12	True	AATAAA	-19	NA	11111300	11123078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_95936.known	chrX	+	2286	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	11.7434970184448	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGTCCTCTTTA	9	True	NA	27	True	AATAAA	-40	NA	11758236	11775772	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95938.known	chrX	+	1646	12	FSM	ENSG00000005302.19	ENST00000468149.5	1646	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	21.0080661407757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTTAGGAATGATTC	25	True	NA	NA	False	GGGGCT	-31	NA	11758252	11775231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95939.known	chrX	+	2230	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	15.7347810068438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	907	False	NA	-9	True	AATAAA	-4	NA	11759603	11775736	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_95940.known	chrX	+	1715	10	FSM	ENSG00000005302.19	ENST00000647857.1	1715	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	12.8706767882522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTAGCATTTAATTTT	22	True	NA	5	True	AATAAA	-23	NA	11758249	11769102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572
transcript_95943.known	chrX	+	2469	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	9.53356643071673	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	17	True	NA	9	True	AATAAA	-20	NA	12791411	12824222	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
transcript_95946.known	chrX	+	767	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	17707.5	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTGTTTGGTT	20	False	NA	31	True	AATAAA	-16	NA	12975243	12977227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12975444_12976245_12976362_12976776
transcript_95947.known	chrX	+	622	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	36504	junction_2	237.5	11813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	8	True	NA	27	True	AATAAA	-12	NA	12975109	12977223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12975169_12976245_12976362_12976776
transcript_95948.known	chrX	+	1702	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	0	0	0	0	multi-exon	FALSE	canonical	3	36504	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	8	True	NA	30	True	AATAAA	-15	NA	12975109	12977226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_12976362_12976776
transcript_95952.known	chrX	+	2034	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	9.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGTGGTTGGTGAC	-14	True	NA	NA	False	GATAAA	-32	NA	13689127	13710504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13689289_13703813_13703903_13708720
transcript_95954.known	chrX	+	393	3	FSM	ENSG00000123595.8	ENST00000243325.6	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	74.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGATATGTAACTAATA	19	True	NA	NA	False	TTTAAA	-45	NA	13689160	13708817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13689289_13703734_13703903_13708720
transcript_95956.known	chrX	+	737	2	FSM	ENSG00000123595.8	ENST00000618931.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGATTGTTGATGCATTC	7	False	NA	NA	False	NA	NA	NA	13689185	13709354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13689289_13708720
transcript_95958.known	chrX	-	2836	6	FSM	ENSG00000196459.15	ENST00000683983.1	2836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.6287695351964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	-7	True	NA	-16	True	AATAAA	-14	NA	13734620	13712244	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734049_13734186_13734524
transcript_95959.known	chrX	-	2716	5	FSM	ENSG00000196459.15	ENST00000359680.9	2716	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.073476482417	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGGTAGTTTAATATCC	-22	True	NA	-15	True	AATAAA	-15	NA	13734635	13712243	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734524
transcript_9596.known	chr1	+	794	9	FSM	ENSG00000203705.11	ENST00000526997.5	794	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	119.443239658007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATCTGAACTGAAG	12	True	NA	-82	True	AATAGA	-10	NA	212791905	212815225	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212812250_212812329_212815012
transcript_95960.known	chrX	-	3118	8	FSM	ENSG00000046653.15	ENST00000316715.9	3118	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	373.151389095195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTTTTTACCATACAT	265	False	13817112	-5	True	AATAAA	-17	NA	13817093	13770938	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13807649_13807770_13816843
transcript_95962.known	chrX	-	1673	8	FSM	ENSG00000046653.15	ENST00000355135.6	1673	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	373.548893065157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	-3	True	NA	NA	False	AAAAAG	-44	NA	13817069	13773953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13807649_13807770_13816843
transcript_95964.nic	chrX	-	2835	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-45	-90	combination_of_known_junctions	FALSE	canonical	3	477	junction_1	152.062943838691	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTATGCTTATTTT	150	False	13938710	-1	True	AATAAA	-21	NA	13938683	13771028	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_95965.nic	chrX	-	2408	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	477	junction_1	152.062943838691	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	150	False	13938710	-6	True	ATTAAA	-19	NA	13938683	13771455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_95967.known	chrX	-	1830	7	FSM	ENSG00000046653.15	ENST00000356942.9	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	324.835043607606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	12	False	NA	NA	False	AAAAAG	-44	NA	13817346	13773953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13816843
transcript_95968.known	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	156.191566851593	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	15	True	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_95974.known	chrX	+	3612	23	FSM	ENSG00000046651.16	ENST00000340096.11	3612	23	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_9	25.147170124872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTTGTCTTAAATTT	6	True	NA	9	True	AATAAA	-21	NA	13734747	13769357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_95977.known	chrX	+	3296	22	FSM	ENSG00000046651.16	ENST00000380550.6	3296	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	28.4687042237859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	4	True	NA	-37	True	NA	NA	NA	13734897	13769311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_95979.nic	chrX	+	3047	20	ISM	ENSG00000046651.16	ENST00000340096.11	3612	23	-93	2200	-88	-1628	5prime_fragment	FALSE	canonical	3	60	junction_9	24.5267675585228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAAAAAATACGGG	NA	False	NA	-71	True	NA	NA	NA	13734654	13767157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126
transcript_9598.nic	chr1	+	1639	4	ISM	ENSG00000203705.11	ENST00000488246.6	498	6	-27	5946	3	870	5prime_fragment	FALSE	canonical	3	373	junction_1	17.2111075245674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAAATTCA	3	True	NA	NA	False	NA	NA	NA	212791896	212798552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111
transcript_95983.nic	chrX	+	1316	9	ISM	ENSG00000046651.16	ENST00000682953.1	4299	23	-102	22476	-88	-7118	5prime_fragment	FALSE	canonical	3	11	junction_2	38.9831694452875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	NA	False	NA	NA	False	ATTAAA	-18	NA	13734654	13746835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_13735084_13735247_13735347_13736107_13736297_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_95984.nic	chrX	+	1127	8	ISM	ENSG00000046651.16	ENST00000340096.11	3612	23	-93	22522	-88	-7118	5prime_fragment	FALSE	canonical	3	90	junction_1	8.66849797501604	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	NA	False	NA	NA	False	ATTAAA	-18	NA	13734654	13746835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_95985.nic	chrX	+	1029	5	ISM	ENSG00000046651.16	ENST00000683655.1	4139	23	-84	29471	-6	0	5prime_fragment	FALSE	canonical	3	90	junction_1	7.59522876548166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAACTTTTAGGCCAAG	-5	True	NA	NA	False	NA	NA	NA	13734736	13739314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001
transcript_95989.known	chrX	-	3147	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	25.6843824142221	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTGTCTTTAAAAATCA	8	True	NA	-21	True	AATAAA	-15	NA	14029892	14006725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
transcript_9599.known	chr1	-	2565	2	FSM	ENSG00000198468.10	ENST00000356684.8	2565	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTTTCTTTTTTTTAT	NA	False	NA	NA	False	CATAAA	-16	NA	212858125	212852104	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212854310_212857765
transcript_95996.known	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	39.3474550920669	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	7	True	NA	-14	True	CATAAA	-17	NA	14029893	14008672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
transcript_95998.known	chrX	-	2712	10	FSM	ENSG00000181544.15	ENST00000452869.1	2712	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	21.2939451198089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAAAATGTTGCA	1	True	NA	NA	False	NA	NA	NA	14873052	14843692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
transcript_96.known	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_2	952.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV3_+_4081_4568_4780_6570
transcript_960.known	chr1	-	164	1	FSM	ENSG00000206652.1	ENST00000383925.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	3	False	NA	NA	False	NA	NA	NA	16514285	16514121	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16514100_16514300
transcript_96004.known	chrX	-	2894	9	FSM	ENSG00000181544.15	ENST00000324138.7	2894	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	11.5081492864839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGGCCATTTTATCTC	-16	True	NA	NA	False	AATAAA	-15	NA	14873069	14843406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14872985
transcript_96006.known	chrX	-	3017	10	FSM	ENSG00000181544.15	ENST00000650831.1	3017	10	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_4	21.2939451198089	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGCCATTTTATCTCCC	-16	True	NA	NA	False	AATAAA	-17	NA	14873069	14843404	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
transcript_96007.nnic	chrX	-	591	3	NNC	ENSG00000181544.15	novel	3017	10	NA	NA	-19	150	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	42.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	1	True	NA	-10	True	AATAAA	-19	NA	14873088	14865192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_14865581_14868922_14869044_14873006
transcript_96009.known	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	8.83984485965999	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	-15	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
transcript_9601.known	chr1	-	929	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	13	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	NA	False	NA	1	True	AATAAA	-40	NA	212858125	212856603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212857173_212857765
transcript_96013.known	chrX	-	1613	7	FSM	ENSG00000102048.16	ENST00000380488.9	1613	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.06718737290547	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTAAGCTTCCCTGT	-14	True	NA	NA	False	AATAAA	-26	NA	15270083	15243986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15244631_15248743_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780
transcript_96015.known	chrX	-	3590	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.8921990433521	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	11	True	NA	-7	True	AATAAA	-23	NA	15335523	15319455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
transcript_96016.known	chrX	-	3246	6	FSM	ENSG00000165195.16	ENST00000635598.1	3246	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	15.0013332740793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGAGTTTGTCTTAT	-20	True	NA	-8	True	AATAAA	-22	NA	15335554	15319456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331589_15331993_15335500
transcript_96017.known	chrX	-	854	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	14.1619207736804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTATTCTCACAGTAAA	-20	True	NA	NA	False	AATAGA	-30	NA	15335554	15321564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
transcript_96019.known	chrX	-	1539	10	FSM	ENSG00000087842.11	ENST00000380421.3	1539	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	25.8977095130958	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493564	15384798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493155
transcript_9602.known	chr1	-	633	2	FSM	ENSG00000198468.10	ENST00000424044.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	8	True	NA	1	True	AATAAA	-40	NA	212858083	212856603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212856919_212857765
transcript_96020.known	chrX	-	1274	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_7	8.62525719781127	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	-6	True	NA	0	True	AATAAA	-24	NA	15493333	15384798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_96021.nnic	chrX	-	1222	10	NNC	ENSG00000087842.11	novel	1539	10	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	28.2925632596707	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493388	15384798	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493296
transcript_96028.known	chrX	+	6837	8	FSM	ENSG00000169239.13	ENST00000318636.8	6837	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.77281052085584	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTACTATCTTGATT	-22	True	NA	4	True	AATAAA	-19	NA	15738269	15788411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_15738353_15749970_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484
transcript_96032.known	chrX	-	1352	6	FSM	ENSG00000147003.7	ENST00000380342.4	1352	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	6.01331855134916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	1	True	NA	-8	True	AATAAA	-27	NA	15664805	15627317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717
transcript_96034.nnic	chrX	-	1368	6	NIC	ENSG00000147003.7	novel	1352	6	NA	NA	-80	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	6.8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	2	True	NA	-8	True	AATAAA	-27	NA	15675092	15627317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15674988
transcript_96035.nnic	chrX	-	1486	6	NNC	ENSG00000147003.7	novel	1352	6	NA	NA	-632	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.08801805866774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	-4	True	NA	-8	True	AATAAA	-27	NA	15675644	15627317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15675422
transcript_9604.known	chr1	+	5919	10	FSM	ENSG00000162769.13	ENST00000366971.9	5919	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	61.1769342477262	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	-6	True	NA	19	True	AATAAA	-19	NA	212858274	212899363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212859191_212863724_212863870_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_96042.known	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.6316371938716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	88	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
transcript_96044.nnic	chrX	+	1288	3	NIC	ENSG00000186312.10	novel	1264	4	NA	NA	-120	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	NA	False	NA	NA	False	AATAAA	-21	NA	15675425	15703724	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_15675573_15688660_15688859_15702781
transcript_96049.nic	chrX	+	343	4	ISM	ENSG00000169249.14	ENST00000307771.8	1479	11	-19	19464	-6	0	5prime_fragment	FALSE	canonical	3	112	junction_1	18.8325958557674	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGTAGGAATCACGTAA	-9	True	NA	NA	False	NA	NA	NA	15790464	15803796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687
transcript_96050.known	chrX	-	1946	6	FSM	ENSG00000182287.15	ENST00000479184.2	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	720.260897175461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTAATGCTACATAAAT	452	False	NA	NA	False	AATATA	-11	NA	15854789	15830231	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15831569_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_96051.known	chrX	-	2237	5	FSM	ENSG00000182287.15	ENST00000329235.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	593.850307316583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGACTTTTCTACTC	310	False	NA	-8	True	AATAAA	-21	NA	15854931	15825805	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_15827373_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_96052.nic	chrX	-	1579	2	ISM	ENSG00000182287.15	ENST00000450644.2	1925	5	9308	-79	7066	0	3prime_fragment	FALSE	canonical	3	407	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	9794	False	NA	-14	True	AATAAA	-14	NA	15845447	15830058	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_15831569_15845378
transcript_96057.known	chrX	+	2417	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTATTTATTCTTG	0	True	NA	NA	False	TATAAA	-7	NA	16123564	16153518	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_16124367_16150304_16150657_16152255
transcript_96059.known	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_18	37.1408729628753	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	-41	True	NA	-8	True	AATAAA	-26	NA	16712669	16587998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
transcript_9606.known	chr1	+	1108	9	FSM	ENSG00000162769.13	ENST00000419102.1	1108	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	115.472331642693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCCTTGGAGAGAGAT	606	False	NA	-62	True	NA	NA	NA	212858915	212895334	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212859191_212863724_212863870_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_96060.nnic	chrX	-	3739	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	55.0483513618194	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	-50	True	NA	-8	True	AATAAA	-26	NA	16712678	16587998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_96061.known	chrX	-	3526	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_18	49.748410235782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGCTGAATAATTAAT	6728	False	16712957	NA	False	NA	NA	NA	16712936	16588305	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_96063.known	chrX	-	4319	19	FSM	ENSG00000047230.15	ENST00000443824.5	4319	19	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_18	57.6630538367314	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTTCACCTTTTG	7447	False	NA	-12	True	AATAAA	-22	NA	16712217	16588002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16711512
transcript_96065.nnic	chrX	-	2339	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_18	51.6884362739331	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	-55	True	NA	-6	True	ATTAAA	-19	NA	16712683	16589548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
transcript_96066.nnic	chrX	-	2189	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	55.0483513618194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	-50	True	NA	-6	True	ATTAAA	-19	NA	16712678	16589548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_96075.known	chrX	+	6153	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	33.9926462635671	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	-14	True	NA	8	True	AATAAA	-27	NA	16719611	16765340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
transcript_96086.known	chrX	-	1904	12	FSM	ENSG00000102054.18	ENST00000404022.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	240.918627598546	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	-10	True	NA	-53	True	NA	NA	NA	16870361	16844689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858823_16862954_16863101_16869075_16869221_16870037
transcript_96087.known	chrX	-	2036	12	FSM	ENSG00000102054.18	ENST00000380084.8	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	228.773336884833	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGTTTTTTTAAA	-21	True	NA	-17	True	AATAAA	-11	NA	16869886	16844653	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16869493
transcript_96088.known	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_9	67.0604759751713	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	-11	True	NA	-4	True	AATAAA	-20	NA	16870362	16844340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
transcript_9609.nnic	chr1	+	1700	4	NNC	ENSG00000282718.1	novel	554	3	NA	NA	-90	2807	intron_retention	FALSE	canonical	3	25	junction_3	2.44948974278318	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTCATGCTTTCTCATG	6218	False	NA	21	True	AATAAA	-15	NA	212916696	212920384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_212917201_212917359_212917705_212918335_212918387_212919584
transcript_96095.known	chrX	+	4362	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	19.3779816503037	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	10	True	NA	104	True	AGTAAA	-19	NA	16786465	16844519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
transcript_961.known	chr1	+	1110	1	FSM	ENSG00000261135.1	ENST00000562878.1	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGACTCATCTTTGAC	NA	False	NA	6	True	AATAAA	-16	NA	16514644	16515754	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16514600_16515800
transcript_9610.nic	chr1	+	508	2	NIC	ENSG00000282718.1	novel	554	3	NA	NA	72	-52	intron_retention	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTTTTTTCTTTTTTT	6380	False	NA	NA	False	TATAAA	-22	NA	212916858	212917525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_212917201_212917359
transcript_96115.known	chrX	+	2679	6	FSM	ENSG00000047634.15	ENST00000380045.7	2679	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.72046505340853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	-3	True	NA	12	True	AATAAA	-20	NA	17737467	17754985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_17737681_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_96117.known	chrX	+	2704	6	FSM	ENSG00000047634.15	ENST00000398080.5	2704	6	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	4.1182520563948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTCAGATGTGATTTC	-22	True	NA	15	True	AATAAA	-23	NA	17737448	17754988	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_17737681_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_96119.nnic	chrX	-	594	3	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-58	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104702	17970128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_17970431_17971986_17972127_18104550
transcript_96122.known	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	17.421104958044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	-1	True	NA	-11	True	AATAAA	-19	NA	18354688	18239312	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
transcript_96126.known	chrX	-	4678	27	FSM	ENSG00000173698.18	ENST00000357544.7	4678	27	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_21	17.8216011473611	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAAGTTTGGTAATTTT	788	False	NA	-5	True	AATAAA	-14	NA	19122559	18989313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19035941_19035978_19037466_19037491_19040188_19040225_19068716_19068836_19082701_19082747_19122441
transcript_96128.known	chrX	-	2049	8	FSM	ENSG00000180815.15	ENST00000470101.1	2049	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	4.52656557650139	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATGGTCAGCGCGAA	NA	False	NA	-4	True	AATAAA	-14	NA	19373178	19360059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_19360834_19361338_19361416_19361492_19361594_19362737_19362851_19369053_19369220_19370958_19371065_19371344_19371531_19372652
transcript_96132.known	chrX	+	3484	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	502.774566244962	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_96134.known	chrX	+	3391	11	FSM	ENSG00000131828.14	ENST00000545074.5	3391	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	403.467421237453	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351259_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_96135.known	chrX	+	3349	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_1	98.6470475990032	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAACCACGCTAATAC	-24	True	NA	76	True	AAAAAG	-19	NA	19343926	19361718	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_9614.known	chr1	+	1206	7	FSM	ENSG00000143494.16	ENST00000366967.6	1206	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	238.719966115577	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGAACTTTTG	23	False	NA	NA	False	AGTAAA	-10	NA	212950666	212988924	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_212950741_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_96141.known	chrX	+	3277	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	400.103042283415	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_96146.known	chrX	-	3819	13	FSM	ENSG00000147010.18	ENST00000379716.5	3819	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_12	167.231293589315	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATGATTAAAATGAAAT	1	True	NA	-31	True	TATAAA	-40	NA	19670998	19534006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_19536459_19537716_19537781_19541924_19542194_19545921_19546051_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19670861
transcript_96147.known	chrX	-	4062	17	FSM	ENSG00000184368.16	ENST00000379643.10	4062	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	5.09901951359278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGTCAACTGCATAAAG	0	True	NA	NA	False	ATTAAA	-24	NA	20116907	20006712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20008399_20010776_20011053_20012348_20012536_20013053_20013133_20013568_20013626_20015222_20015328_20016093_20016326_20024950_20025084_20025680_20025953_20042501_20042630_20044363_20044525_20050823_20050947_20052877_20052989_20056679_20056792_20063413_20063578_20064727_20064806_20116749
transcript_96148.known	chrX	-	3930	16	FSM	ENSG00000184368.16	ENST00000379651.7	3930	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	6.57740239169098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGTCAACTGCATAAAG	9	True	NA	NA	False	ATTAAA	-24	NA	20116898	20006712	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20008399_20010776_20011053_20012348_20012536_20013053_20013133_20013568_20013626_20015222_20015328_20016093_20016326_20024950_20025084_20025680_20025953_20042501_20042630_20044363_20044525_20052877_20052989_20056679_20056792_20063413_20063578_20064727_20064806_20116749
transcript_96149.known	chrX	-	4414	7	FSM	ENSG00000173674.11	ENST00000379607.10	4414	7	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_4	131.466620182548	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTATACAATTGATTCT	-1	True	NA	-6	True	AATAAA	-18	NA	20141838	20124524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
transcript_96157.known	chrX	-	7987	22	FSM	ENSG00000177189.14	ENST00000379565.9	7987	22	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	11.3066913746361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCCCTTTTATCAGA	-29	True	NA	0	True	AATAAA	-17	NA	20266909	20149910	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20266563
transcript_96158.known	chrX	-	2682	22	FSM	ENSG00000177189.14	ENST00000646610.1	2682	22	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_21	17.3851919160872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	370	False	NA	NA	False	NA	NA	NA	20267100	20154931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20267038
transcript_96161.known	chrX	+	4220	20	FSM	ENSG00000149970.16	ENST00000543067.6	4220	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_19	18.6412404328507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATCTTTTCAGATAGCT	-1	True	NA	NA	False	AATAAA	-18	NA	21374420	21642730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21641532
transcript_96165.known	chrX	+	1573	4	FSM	ENSG00000149970.16	ENST00000646175.1	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTAAGTGTTTATTTCTT	0	True	NA	NA	False	AATAAA	-2	NA	21374467	21441405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693
transcript_96166.known	chrX	+	4446	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	10.3653268158799	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	-6	True	NA	20	True	AATAAA	-32	NA	21839616	21885423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
transcript_96168.known	chrX	+	4457	7	FSM	ENSG00000012174.12	ENST00000365779.2	4457	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	11.0867789130417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCTGGAAGTGCTTG	-9	True	NA	NA	False	AATAAA	-16	NA	21839653	21873084	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497
transcript_96169.nic	chrX	+	1971	5	ISM	ENSG00000012174.12	ENST00000465888.1	1862	6	-41	2929	-22	-2929	5prime_fragment	FALSE	canonical	3	64	junction_2	13.0862523283024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGAAAAGTATAAGAAGAA	NA	False	NA	NA	False	AAAACA	-5	NA	21839594	21854664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375
transcript_96174.known	chrX	+	1703	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	480.817231388394	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	-13	True	NA	15	True	ATTAAA	-16	NA	21940708	21994837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_96187.known	chrX	+	1174	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	680.826324678328	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTTTTAATTTAAAAA	-7	True	NA	NA	False	NA	NA	NA	21940714	21994473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_96195.known	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2342	junction_6	326.478006746073	1232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	-5	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
transcript_96200.known	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	64.4871842987078	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	-25	True	NA	-12	True	AATAAA	-21	NA	23743276	23703670	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_96203.nic	chrX	-	1597	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	60.2841398279257	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	2591	False	NA	-18	True	AATAAA	-15	NA	23743302	23703676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_96207.nic	chrX	-	910	9	ISM	ENSG00000123130.17	ENST00000336430.11	1675	15	-35	4166	-21	-6	5prime_fragment	FALSE	canonical	0	0	junction_7	79.4052107861946	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATTACGCTGCAGAAG	2582	False	NA	-6	True	AATAAA	-17	NA	23743311	23707836	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_96210.known	chrX	-	683	7	FSM	ENSG00000123130.17	ENST00000492081.1	683	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	104.072757669281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCTGCAGAAGAGATTA	1	True	NA	0	True	AATAAA	-23	NA	23743250	23707830	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_23707945_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_96211.known	chrX	+	1135	7	FSM	ENSG00000130066.17	ENST00000489394.5	1135	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	229.644411113259	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	25	False	NA	23	True	AATAAA	-17	NA	23783196	23786210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23784293_23784404_23785327_23785430_23785519_23785561_23785685
transcript_96213.known	chrX	+	1049	6	FSM	ENSG00000130066.17	ENST00000379270.5	1049	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	36.351616195157	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	1	True	NA	23	True	AATAAA	-17	NA	23783172	23786210	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685
transcript_96219.known	chrX	+	868	5	FSM	ENSG00000130066.17	ENST00000379254.5	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	211.595723019157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTCTCGTGAGTCAT	1	True	NA	17	True	GATAAA	-37	NA	23783172	23786113	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23785327_23785430_23785519_23785561_23785685
transcript_96222.known	chrX	+	909	3	FSM	ENSG00000130066.17	ENST00000379253.7	909	3	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTATCACACACTTCAAA	1	True	NA	NA	False	AATAAA	-31	NA	23783172	23784411	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_23783418_23783657_23783710_23783799
transcript_96225.nic	chrX	-	1045	10	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	105.159960460009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCGATATCACTGAGT	NA	False	NA	-8	True	ATTAAA	-17	NA	23907961	23833356	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23833511_23833606_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_96227.known	chrX	-	1122	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_1	49.7418335005858	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	-17	True	NA	-4	True	ATTAAA	-21	NA	23907938	23833352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_9623.nic	chr1	-	2173	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_8	80.0546688207502	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-38	True	NA	10	True	AATATA	-26	NA	213015510	212994728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
transcript_96230.nic	chrX	-	1036	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	63.0590001506526	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	NA	False	NA	-11	True	ATTAAA	-14	NA	23907961	23833359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_96231.nnic	chrX	-	1016	8	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	42	junction_7	105.921804041607	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	-19	True	NA	-4	True	ATTAAA	-21	NA	23907940	23833352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23907693
transcript_96233.nnic	chrX	-	907	8	NIC	ENSG00000184831.14	novel	714	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	111.937300233986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	-19	True	NA	-11	True	ATTAAA	-14	NA	23907940	23833359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23907693
transcript_96249.nnic	chrX	+	2355	12	NNC	ENSG00000130741.11	novel	3457	12	NA	NA	-314	58	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_11	395.375101738059	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTCGTCTTTGAGTAC	-19	True	NA	27	True	AATAAA	-16	NA	24054631	24077466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073182_24076721
transcript_9625.known	chr1	-	4690	9	FSM	ENSG00000174606.14	ENST00000366962.8	4690	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	84.3118282034022	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-9	True	NA	-12	True	AATAAA	-15	NA	213015867	212992181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_96254.known	chrX	+	3457	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_4	136.448700740917	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATCTAACATGTCCC	5	True	NA	25	True	AATAAA	-21	NA	24054955	24078810	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
transcript_96261.nic	chrX	+	1968	12	NIC	ENSG00000130741.11	novel	3457	12	NA	NA	-314	63	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	409.753887027182	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTCTTTGAGTACCTCCA	-19	True	NA	32	True	AATAAA	-21	NA	24054631	24077471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073412_24077343
transcript_9627.known	chr1	-	4323	8	FSM	ENSG00000174606.14	ENST00000360506.6	4323	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	100.802089385537	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	32	False	NA	-12	True	AATAAA	-15	NA	213015826	212992181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213015612
transcript_96276.known	chrX	+	773	5	FSM	ENSG00000130741.11	ENST00000423068.1	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_4	203.038635485959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATGTGTAAAACTATTT	20	False	NA	NA	False	TTTAAA	-29	NA	24054970	24060479	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087
transcript_96280.nic	chrX	+	1306	7	NIC	ENSG00000005889.16	novel	7513	9	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	10.0443461155462	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGAGAAGACCTGATT	-30	True	NA	NA	False	NA	NA	NA	24149712	24209002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_24149795_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_96282.known	chrX	+	12720	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	27.902723585182	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	10	True	NA	17	True	AATAAA	-18	NA	24465285	24550466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
transcript_96285.known	chrX	-	1289	9	FSM	ENSG00000102230.14	ENST00000356768.8	1289	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	27.8205746705563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCAAAGTGCTTCTG	168	False	NA	NA	False	AATAAA	-14	NA	24647158	24561841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_24562118_24562442_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_96287.known	chrX	-	5558	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	2.35606035749581	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	-21	True	NA	-1	True	AATAAA	-17	NA	24647347	24558086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_96288.nic	chrX	-	1583	4	ISM	ENSG00000102230.14	ENST00000496020.1	856	7	-326	26784	-17	-26784	5prime_fragment	FALSE	canonical	3	83	junction_1	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAACTACAATATGATT	NA	False	NA	NA	False	AATAAA	-9	NA	24647364	24589184	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_24590175_24607744_24607862_24618984_24619085_24646988
transcript_96289.known	chrX	+	5487	37	FSM	ENSG00000101868.13	ENST00000379068.8	5487	37	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_20	19.7584760683411	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	-2	True	NA	24	True	AATAAA	-17	NA	24693917	24996986	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
transcript_96291.known	chrX	+	2399	15	FSM	ENSG00000101868.13	ENST00000677890.1	2399	15	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_11	11.5230470035012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATCCCGTTTTCTCTA	21	True	NA	NA	False	ATTAAA	-23	NA	24693940	24728628	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781
transcript_96293.known	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	-58	True	NA	NA	NA	24789069	24788391	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_24788400_24789100
transcript_96294.known	chrX	+	1718	2	FSM	ENSG00000214107.9	ENST00000397548.4	1718	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTTCAGTGGCTCAT	-8	True	NA	NA	False	AATAAA	-16	NA	30247145	30252040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_30247257_30250433
transcript_96295.known	chrX	-	1813	2	FSM	ENSG00000169297.8	ENST00000378970.5	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGGGTTTAAGTAAGGC	-1	True	NA	NA	False	AATAAA	-40	NA	30309390	30304205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_30304824_30308195
transcript_96296.known	chrX	+	4515	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	13.9481181526398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGAATTTGTAAATCA	14	True	NA	NA	False	AATAAA	-16	NA	30653422	30731462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_96299.known	chrX	+	3638	20	FSM	ENSG00000198814.14	ENST00000378946.7	3638	20	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_19	22.3476683917691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	535	False	NA	NA	False	AATAAA	-18	NA	30653358	30730608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30728731
transcript_9630.nnic	chr1	-	1630	7	NIC	ENSG00000174606.14	novel	4323	8	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	135.831697331661	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-18	True	NA	10	True	AATATA	-26	NA	213015807	212994728	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213005032_213005455_213007128_213007199_213008209_213008467_213015612
transcript_96301.known	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	20.8200308407679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	535	False	NA	NA	False	AATAAA	-18	NA	30653358	30730608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_96306.nic	chrX	+	942	8	ISM	ENSG00000198814.14	ENST00000378945.7	2063	19	-106	32440	13	68	5prime_fragment	FALSE	canonical	3	85	junction_6	11.1080041007393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAAAAAACCTAAT	548	False	NA	NA	False	AAAACA	-38	NA	30653371	30696730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616
transcript_96309.known	chrX	-	4645	17	FSM	ENSG00000198947.18	ENST00000378723.7	4645	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	8.84943501021393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGGACTGCAGTACTT	3	True	NA	NA	False	AATAAA	-27	NA	31266952	31119218	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931_31177971_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_96312.known	chrX	-	1400	9	FSM	ENSG00000198947.18	ENST00000681654.1	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	6.86931583201704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTAATTGCCTTA	-8	True	NA	NA	False	NA	NA	NA	31266963	31178421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_96313.known	chrX	+	1663	4	FSM	ENSG00000130962.18	ENST00000463135.1	1663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	20.8326666559997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTCCAGTTGATGC	49	False	NA	NA	False	AATAAA	-21	NA	37349378	37442224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37440790
transcript_96314.known	chrX	+	4400	4	FSM	ENSG00000130962.18	ENST00000378628.9	4400	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	5.09901951359278	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	34	True	NA	25	True	AATAAA	-18	NA	37349363	37457291	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37453135
transcript_96318.known	chrX	+	4509	4	FSM	ENSG00000130962.18	ENST00000543642.5	4509	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.4821855949366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTTTTCTGCCATGT	0	True	NA	26	True	AATAAA	-19	NA	37349329	37457292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_37349470_37406208_37406260_37425839_37426001_37453135
transcript_96319.known	chrX	-	920	6	FSM	ENSG00000165169.11	ENST00000378581.7	920	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGGGCAACCACCCC	108	False	NA	NA	False	NA	NA	NA	37847514	37836756	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_37837360_37840612_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_96321.known	chrX	-	719	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	37.7392368762274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAATTTGTCAGTGTAT	214	False	NA	-5	True	ACTAAA	-24	NA	37847408	37840542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
transcript_96322.known	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	10.256095748383	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	-1	True	NA	0	True	AATAAA	-21	NA	37847571	37838835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_96329.known	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	8.90415355984408	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	-2	True	NA	0	True	AATAAA	-21	NA	38220871	38149338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_96331.known	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	9.85199108784928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	-1	True	NA	NA	False	AATAAA	-27	NA	38327509	38269162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_96335.nic	chrX	-	2397	18	ISM	ENSG00000156313.15	ENST00000642395.2	3053	19	-58	4267	-23	0	5prime_fragment	FALSE	canonical	3	24	junction_16	9.06035128446596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTGAAACAACACCAAGC	-2	True	NA	NA	False	NA	NA	NA	38327567	38273429	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_96338.nic	chrX	-	2592	17	NIC	ENSG00000156313.15	novel	2819	20	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	14.4068939660844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATAAGATATTTCCTA	-2	True	NA	NA	False	AATAAA	-25	NA	38327567	38269348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_96339.nic	chrX	-	2290	16	ISM	ENSG00000156313.15	ENST00000642395.2	3053	19	-58	7425	-23	-3158	5prime_fragment	FALSE	canonical	3	24	junction_14	8.58836422143356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGATGATAGATGCTTA	-2	True	NA	4	True	NA	NA	NA	38327567	38276587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_9634.known	chr1	+	5505	15	FSM	ENSG00000136643.12	ENST00000366960.8	5505	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	18.9693630545118	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTCATTTGATTTTT	-47	True	NA	NA	False	CATAAA	-15	NA	213051240	213274774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_96341.known	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	24.7839645327212	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	0	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_96343.known	chrX	+	1812	2	FSM	ENSG00000165175.17	ENST00000457894.5	1812	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACAAGCGTCTGGTCCT	3	True	NA	-59	True	AATAAA	-22	NA	38801439	38806446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_38801488_38804682
transcript_96344.known	chrX	+	4814	2	FSM	ENSG00000165175.17	ENST00000336949.7	4814	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTCTCTCTGGTAT	-8	True	NA	32	True	AATAAA	-34	NA	38801454	38806537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_38804414_38804682
transcript_96346.known	chrX	+	1889	3	FSM	ENSG00000165175.17	ENST00000378474.3	1889	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	217	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTCAACTAAATTGGACA	-9	True	NA	-72	True	AATAAA	-9	NA	38801453	38806433	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_38801488_38804309_38804414_38804682
transcript_96352.known	chrX	+	2242	9	FSM	ENSG00000182220.15	ENST00000636580.2	2242	9	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_6	58.0425490480906	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGCATACTTTATGT	3	True	NA	NA	False	NA	NA	NA	40580969	40606848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_96354.known	chrX	+	1904	8	FSM	ENSG00000182220.15	ENST00000636287.1	1904	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	413.962041047934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCATTGCAGTACTA	31	True	NA	31	True	AATAAA	-19	NA	40580997	40606637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_96356.known	chrX	+	1877	8	FSM	ENSG00000182220.15	ENST00000636251.1	1877	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	399.785554761448	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGATGATTCCAAA	3	True	NA	11	True	NA	NA	NA	40580969	40606617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_96357.known	chrX	+	1093	7	FSM	ENSG00000182220.15	ENST00000423649.2	1093	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	352.377047114782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATAGATTCCATAATAT	15	True	NA	106	True	NA	NA	NA	40580981	40605945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_96358.known	chrX	+	1995	9	FSM	ENSG00000182220.15	ENST00000635774.1	1995	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	314.430338071885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAATATTAAGTGGAAG	-30	True	NA	-67	True	NA	NA	NA	40580936	40606539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598651_40598735_40599591_40599742_40600761_40600882_40605560
transcript_96359.known	chrX	+	709	1	FSM	ENSG00000238205.4	ENST00000423387.4	709	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAAGTTGAGTGTTGCCTT	-6	True	NA	NA	False	AATAAA	-22	NA	40623427	40624136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40623400_40624100
transcript_9636.nic	chr1	+	2013	12	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	24416	-28	-14264	5prime_fragment	FALSE	canonical	3	138	junction_11	41.6619611668061	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAATATGAAGAATTGA	NA	False	NA	NA	False	NA	NA	NA	214603166	214640155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920
transcript_96360.known	chrX	-	520	5	FSM	ENSG00000180182.11	ENST00000482034.5	520	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	106.189688764964	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCGGCTTGTAACCACA	23	True	NA	NA	False	AAAACA	-33	NA	40735858	40713831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735721
transcript_96361.known	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	NA	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_40735791_40738192
transcript_96364.known	chrX	+	6203	18	FSM	ENSG00000215301.11	ENST00000646223.1	6203	18	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	238.615339567297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGCTTCATGTCCT	2	True	NA	NA	False	AATACA	-19	NA	41334163	41351668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41340635_41340815_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_96367.known	chrX	+	4554	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_15	124.970605918952	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	13	False	NA	22	True	AATAAA	-19	NA	41334174	41350209	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_96373.nic	chrX	+	738	7	ISM	ENSG00000215301.11	ENST00000441189.4	4122	16	-2	6543	-2	-92	5prime_fragment	FALSE	canonical	3	582	junction_5	49.9046312702761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAGAGACTTGATGGC	-2	True	NA	NA	False	NA	NA	NA	41334159	41343317	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215
transcript_96376.known	chrX	-	564	5	FSM	ENSG00000147044.23	ENST00000644770.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	109.355784026269	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTGTGTTTTTGTACTG	621	False	NA	0	True	AATAAA	-19	NA	41923012	41743552	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_41743737_41745523_41745602_41787177_41787284_41853114_41853228_41922929
transcript_96377.known	chrX	+	5438	16	FSM	ENSG00000189221.11	ENST00000542639.6	5431	16	0	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_1	15.2280443042872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACTCCTGTATTTAGTTG	7	True	NA	43	True	AATAAA	-26	NA	43654906	43746824	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_43656415_43657861_43657970_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
transcript_96378.known	chrX	+	3931	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	5.22161910928487	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTCGACTCCTGTAT	-4	True	NA	36	True	AATAAA	-19	NA	43656298	43746817	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
transcript_9638.nic	chr1	+	2340	12	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	24089	-28	-13937	5prime_fragment	FALSE	canonical	3	138	junction_11	41.6619611668061	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAATAGAAAATATGT	NA	False	NA	NA	False	NA	NA	NA	214603166	214640482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920
transcript_96381.known	chrX	-	2570	15	FSM	ENSG00000069535.14	ENST00000378069.5	2570	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.50305935256218	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTCCTTTCTTTTTG	-16	True	NA	NA	False	AATAAA	-16	NA	43882450	43766609	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_43767619_43768653_43768717_43769306_43769419_43775174_43775273_43778681_43778740_43780341_43780396_43781447_43781545_43793418_43793579_43795738_43795889_43797124_43797267_43802171_43802264_43803299_43803405_43838867_43839006_43843669_43843765_43882253
transcript_96382.known	chrX	-	3257	15	FSM	ENSG00000183690.13	ENST00000420999.2	3257	15	0	0	0	0	multi-exon	TRUE	non_canonical	2	12	junction_10	4.1057451037714	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTAAGAAGTCTATC	-26	True	NA	NA	False	ATTAAA	-26	NA	44343672	44147871	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_44148897_44163921_44164028_44176291_44176385_44178366_44178565_44229648_44229780_44232480_44232678_44235304_44235448_44242120_44242290_44248271_44248411_44248802_44248917_44250193_44250446_44261074_44261299_44272685_44272837_44312567_44312757_44343546
transcript_96387.known	chrX	-	1054	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	31.4195400984801	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTTATGTTGTTT	-8	True	NA	-4	True	ATTAAA	-33	NA	44542859	44523638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
transcript_96388.nnic	chrX	-	1278	5	NNC	ENSG00000069509.6	novel	1054	5	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	95.5389318550297	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTAAGGCTGACTTTTT	-5	True	NA	39	True	TTTAAA	-18	NA	44542811	44523771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542399
transcript_96395.nnic	chrX	+	1355	3	NNC	ENSG00000229491.5	novel	717	4	NA	NA	-19562	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTTATTGTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	45300895	45333917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_45301498_45325492_45325602_45333273
transcript_96396.nnic	chrX	+	2222	2	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATGGAGTACTATTC	NA	False	NA	NA	False	AATAAA	-21	NA	45300919	45318071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chrX_+_45301498_45316427
transcript_96397.nnic	chrX	+	2724	2	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATTAAAAATAAGAGG	NA	False	NA	NA	False	AATAAA	-20	NA	45300919	45318573	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chrX_+_45301498_45316427
transcript_96399.known	chrX	-	689	2	FSM	ENSG00000231566.3	ENST00000666464.2	692	2	3	0	3	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTGGCTGGGTGTGG	12	True	NA	NA	False	NA	NA	NA	45851532	45848962	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_45849473_45851353
transcript_96401.known	chrX	+	1354	6	FSM	ENSG00000147121.16	ENST00000298190.10	1354	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	17.7426040929735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGCTC	-1	True	NA	NA	False	NA	NA	NA	46447291	46473669	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472749
transcript_96404.known	chrX	+	2334	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	19.5140974682407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	4	True	NA	15	True	AATAAA	-16	NA	46447296	46474639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
transcript_96409.known	chrX	+	585	5	FSM	ENSG00000147121.16	ENST00000476762.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	9.65336728815391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGGCCGCCGG	4	True	NA	NA	False	NA	NA	NA	46447296	46463449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197
transcript_96413.known	chrX	+	2078	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTGTGAAAATACTT	124	False	NA	-46	True	AATATA	-20	NA	46545492	46548408	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46545628_46546465
transcript_96419.nnic	chrX	+	632	3	Fusion	ENSG00000147119.4_ENSG00000230844.3	novel	672	3	NA	NA	8	-307	multi-exon	FALSE	canonical	3	27	junction_1	5.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGGGCAGTATTGTT	6	True	NA	13	True	ATTAAA	-28	NA	46545518	46598189	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_96420.nnic	chrX	+	848	3	Fusion	ENSG00000147119.4_ENSG00000230844.3	novel	672	3	NA	NA	8	-91	multi-exon	FALSE	canonical	3	27	junction_1	5.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTTTTGTTTGGATG	6	True	NA	26	True	ATTAAA	-26	NA	46545518	46598405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_96421.known	chrX	+	3700	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	9.36416040016402	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	0	True	NA	101	True	AATAAA	-18	NA	46837042	46882358	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
transcript_96422.known	chrX	+	4947	11	FSM	ENSG00000102221.14	ENST00000614628.5	4947	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	14.8016890928029	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	-24	True	NA	15	True	ATTAAA	-16	NA	46912420	47061242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46912720_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
transcript_96423.known	chrX	+	4713	11	FSM	ENSG00000102221.14	ENST00000611250.4	4713	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.0119971213816	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	NA	False	NA	15	True	ATTAAA	-16	NA	46912275	47061242	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_46912341_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
transcript_96424.known	chrX	+	1611	7	FSM	ENSG00000130988.13	ENST00000352078.8	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.61743318211757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCCTTTTTATTT	21	False	NA	26	True	AATAAA	-20	NA	47078379	47093313	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47078710_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
transcript_96425.nic	chrX	+	1461	6	NIC	ENSG00000130988.13	novel	2041	7	NA	NA	-46	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_2	4.48998886412873	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTATTATGTTCCTTTT	NA	False	NA	21	True	AATAAA	-15	NA	47078308	47093308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47078710_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
transcript_96428.known	chrX	-	586	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	289.5	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	1	True	NA	-6	True	ATTAAA	-17	NA	47144702	47142215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47142441_47142613_47142745_47144472
transcript_9643.nic	chr1	+	1372	8	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	35418	-28	13963	5prime_fragment	FALSE	canonical	3	205	junction_5	23.07662480184	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAGTTTCAAGAGGT	NA	False	NA	33	True	NA	NA	NA	214603166	214629153	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045
transcript_96430.known	chrX	-	948	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	149	-328	-4	multi-exon	FALSE	canonical	3	681	junction_1	791.5	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGCTAGTGTTGATT	455	False	NA	-10	True	ATTAAA	-13	NA	47145038	47142219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47142441_47142583_47142745_47144472
transcript_96433.known	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_10	56.9662786199956	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	6	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_96436.known	chrX	+	3201	24	FSM	ENSG00000182872.16	ENST00000329236.8	3201	24	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	77.5324555493767	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCCTCTCCTCTTTC	183	False	NA	27	True	AATAAA	-16	NA	47145446	47186812	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_96437.known	chrX	+	3105	23	FSM	ENSG00000182872.16	ENST00000628161.2	3105	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	76.6695307286327	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	15	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_96438.known	chrX	+	3108	23	FSM	ENSG00000182872.16	ENST00000345781.10	3108	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	82.8748434051099	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	15	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_96442.nic	chrX	+	3622	27	NIC	ENSG00000130985.17	novel	3572	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	309.861634037712	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	0	True	NA	-34	True	AATAAA	-17	NA	47193825	47215128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47194025_47198308_47198356_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_96446.known	chrX	+	3466	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	233.891003674789	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	10	True	NA	-34	True	AATAAA	-17	NA	47190860	47215128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_9645.known	chr1	+	10290	20	FSM	ENSG00000117724.14	ENST00000366955.8	10290	20	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_11	94.0163538552935	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCCTAAGTGTAAA	-3	True	NA	27	True	AATAAA	-24	NA	214603194	214664571	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920_214643325_214644556_214647401_214648674_214648828_214651709_214651887_214652827_214652990_214655240_214655404_214656932_214657410_214658849_214659029_214663590
transcript_96452.known	chrX	+	3572	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	201.537037787103	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	3	True	NA	-34	True	AATAAA	-17	NA	47193828	47215128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_96458.nic	chrX	+	2250	17	NIC	ENSG00000102225.17	novel	3158	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	14	junction_1	294.065887334369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCTGTCTGTCTCTG	12	True	NA	28	True	NA	NA	NA	47218215	47228990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47218665_47222260_47222343_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_9646.nic	chr1	+	1114	7	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	42440	-28	6941	5prime_fragment	FALSE	canonical	3	205	junction_5	23.7112256583717	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAAAGGCCAAGTGAA	NA	False	NA	-54	True	AAGAAA	-44	NA	214603166	214622131	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078
transcript_96465.known	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	206.42282388879	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	29	False	NA	28	True	ATTAAA	-17	NA	47218232	47229997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_96468.known	chrX	+	3196	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_7	60.3817853329959	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCAGTGTGGTTTTTTC	-8	True	NA	35	True	TATAAA	-19	NA	47233008	47248328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_96471.nic	chrX	+	2753	21	NIC	ENSG00000102226.10	novel	804	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	156.608899810962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCCT	373	False	NA	NA	False	NA	NA	NA	47233389	47247952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47233534_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_96472.nic	chrX	+	3129	21	NIC	ENSG00000102226.10	novel	804	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	156.608899810962	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCAGTGTGGTTTTTTC	373	False	NA	35	True	TATAAA	-19	NA	47233389	47248328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47233534_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_96477.known	chrX	-	4297	5	FSM	ENSG00000147124.13	ENST00000313116.11	4297	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	8.61321658847611	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTTAGCATCTGTCTT	-15	True	NA	NA	False	TATAAA	-35	NA	47482585	47445878	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47449475_47455920_47456017_47456271_47456399_47467409_47467761_47482458
transcript_96481.known	chrX	+	2378	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	0	0	0	0	multi-exon	FALSE	non_canonical	3	252	junction_4	28.3498775227611	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	8	True	NA	25	True	NA	NA	NA	47561204	47571908	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
transcript_96485.known	chrX	-	2489	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	3.45506874027131	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCTTTTAGCATTT	-38	True	NA	NA	False	AGTAAA	-16	NA	47629930	47623281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
transcript_96486.known	chrX	+	1271	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	42.0218990527558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	25	False	NA	NA	False	AATAAA	-20	NA	47561221	47565975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
transcript_96487.known	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	35.6033706269505	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	-1	True	NA	26	True	AATAAA	-17	NA	47582435	47586789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_96489.known	chrX	+	626	5	FSM	ENSG00000102265.12	ENST00000377017.5	626	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	262.334114251273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	13	False	NA	26	True	AATAAA	-17	NA	47582449	47586789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47582475_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_9649.nic	chr1	+	706	5	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-28	45414	-28	3967	5prime_fragment	FALSE	canonical	3	207	junction_2	22.7527470868904	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAGAGGTTGAAGA	NA	False	NA	NA	False	AAGAAA	-3	NA	214603166	214619157	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128
transcript_96491.known	chrX	-	2876	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	53.7300350517908	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	-3	True	NA	-6	True	AATATA	-16	NA	47650563	47635520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
transcript_96492.known	chrX	-	2695	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	19.6102014268084	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	8670	False	NA	-6	True	AATATA	-16	NA	47650488	47635520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
transcript_96494.known	chrX	-	574	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_6	71.746467199128	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACATGGCCCTTCTTT	-3	True	NA	-6	True	ATTAAA	-17	NA	47659161	47651797	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
transcript_96499.known	chrX	-	773	6	FSM	ENSG00000126756.12	ENST00000335890.3	773	6	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_1	37.1892457573423	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACATGGCCCTTCTTTTT	-22	True	NA	-4	True	ATTAAA	-19	NA	47659180	47651795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829
transcript_96500.nnic	chrX	-	736	4	Antisense	novelGene_ENSG00000188459.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCTTGCTTCCTAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	47806841	47803098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Antisense_chrX_-_47803422_47803975_47804155_47804583_47804725_47806748
transcript_96503.nnic	chrX	+	627	3	NIC	ENSG00000197779.15	novel	475	2	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	17	True	NA	8	True	AATAAA	-16	NA	47836923	47861045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_47837008_47846104_47846322_47860719
transcript_96504.known	chrX	+	475	2	FSM	ENSG00000197779.15	ENST00000483520.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	9223	False	NA	8	True	AATAAA	-16	NA	47846172	47861045	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_47846322_47860719
transcript_96510.known	chrX	-	3499	6	FSM	ENSG00000147118.12	ENST00000376943.8	3499	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_5	15.4531550176655	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	-8	True	NA	-1	True	AATAAA	-16	NA	48003989	47974850	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003908
transcript_96514.known	chrX	-	3475	5	FSM	ENSG00000221994.12	ENST00000276054.9	3475	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	1.92028643696715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTGCAGTTCATGCA	0	True	NA	NA	False	AATAAA	-33	NA	48071640	48057515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071266
transcript_96516.known	chrX	+	1209	8	FSM	ENSG00000268009.6	ENST00000595689.3	1209	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	4.85293935756086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGCATCTCTCATTA	-2	True	NA	NA	False	AATAAA	-20	NA	48383538	48393347	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48383565_48384033_48384123_48384560_48384676_48385351_48385448_48387310_48387361_48389345_48389482_48391868_48391974_48392755
transcript_96517.known	chrX	+	1092	7	FSM	ENSG00000268009.6	ENST00000620320.4	1092	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.17740818900302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTGTTTGCATCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	48383515	48393343	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48383565_48384033_48384123_48384560_48384676_48385351_48385448_48387310_48387361_48391868_48391974_48392755
transcript_96518.nic	chrX	-	932	3	ISM	ENSG00000269791.6	ENST00000595235.6	1278	8	5778	0	5728	0	3prime_fragment	FALSE	canonical	3	9	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTGTTTGCATCTCTC	5704	False	NA	NA	False	AATAAA	-16	NA	48406182	48402081	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_48402670_48403451_48403557_48405943
transcript_9652.known	chr1	+	689	3	FSM	ENSG00000117724.14	ENST00000464322.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	22.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAACAAACAAACAGTG	-3	True	NA	NA	False	NA	NA	NA	214603194	214615190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_214603322_214613713_214613917_214614831
transcript_96526.nic	chrX	-	1950	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_15	73.0593061986098	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	1825	False	NA	-12	True	AATAAA	-16	NA	48468445	48458543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
transcript_96528.nic	chrX	-	2246	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	236	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_15	75.2238141961854	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	949	False	NA	-12	True	AATAAA	-16	NA	48469321	48458543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
transcript_96534.known	chrX	-	1990	17	FSM	ENSG00000017483.16	ENST00000620913.5	1990	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	81.5066858837359	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	10	True	NA	-12	True	AATAAA	-16	NA	48470260	48458543	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334_48469437_48470181
transcript_96538.known	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	59.8198104495678	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	-10	True	NA	15	True	AATATA	-26	NA	48476198	48486350	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
transcript_96540.nic	chrX	+	1903	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	72	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48476137	48486299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_96546.nic	chrX	+	2046	12	NIC	ENSG00000068438.15	novel	1899	13	NA	NA	-7	0	intron_retention	FALSE	canonical	3	160	junction_9	56.2415099194228	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	-17	True	NA	22	True	ATTAAA	-20	NA	48476191	48486299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48483028_48485735
transcript_9655.known	chr1	-	5859	10	FSM	ENSG00000092978.11	ENST00000366935.8	5859	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	21.6715094303017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTAAAGTTGTCAAAAT	-21	True	NA	NA	False	ATTAAA	-22	NA	217631090	217426991	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_217431366_217449248_217449338_217491679_217491751_217498355_217498396_217514821_217514890_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_96553.nic	chrX	+	1463	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	-61	3396	-15	0	5prime_fragment	FALSE	canonical	3	160	junction_9	52.9668764417914	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	NA	False	NA	33	True	TATAAA	-45	NA	48476137	48482954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
transcript_96554.nic	chrX	+	1457	11	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	70.2071221458336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	NA	False	NA	33	True	TATAAA	-45	NA	48476137	48482954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_96564.known	chrX	+	1287	9	FSM	ENSG00000068438.15	ENST00000496365.5	1287	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	77.5693238335877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAATTTAATATATAGTAA	2709	False	NA	-24	True	ATTAAA	-32	NA	48479037	48486311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_96571.nic	chrX	+	1988	14	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	48.1288949856983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96572.nic	chrX	+	1917	14	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	52.7127978128124	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96573.known	chrX	+	2079	14	FSM	ENSG00000102312.24	ENST00000683923.1	2079	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	54.0841990947077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATTCAATAGGCTTC	25	True	NA	6	True	AATAAA	-5	NA	48509018	48520796	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48509104_48509423_48509708_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96577.known	chrX	+	1848	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	60.8783829843804	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACTGCTCAGAGG	8	True	NA	24	True	AATAAA	-23	NA	48509001	48520814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96578.known	chrX	+	1877	14	FSM	ENSG00000102312.24	ENST00000359882.8	1877	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	69.317125627982	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	-32	True	NA	16	True	AATAAA	-15	NA	48508961	48520806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96580.nic	chrX	+	2194	13	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_1	31.959501282439	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48509104_48509423_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96582.nic	chrX	+	1763	13	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	43.0529389885935	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_96589.known	chrX	+	1125	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	214.480039863853	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	2	True	NA	15	True	AATAAA	-16	NA	48521807	48528716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96590.known	chrX	+	904	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	381.920394192298	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	-7	True	NA	9	True	AATAAA	-10	NA	48521798	48528710	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96591.nnic	chrX	+	856	5	NNC	ENSG00000147155.11	novel	1125	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	368.523404955506	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	0	True	NA	15	True	AATAAA	-16	NA	48521792	48528716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_48521908_48523982_48524073_48526988_48527026_48527154_48527286_48528233
transcript_96594.known	chrX	+	1375	8	FSM	ENSG00000102317.18	ENST00000466764.5	1375	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	473.223595595752	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	6	True	NA	NA	False	NA	NA	NA	48574490	48577977	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48575814_48576084_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_96595.known	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	TRUE	canonical	3	888	junction_1	77.903073680625	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	-1	True	NA	17	True	AATAAA	-22	NA	48574483	48581162	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_966.nic	chr1	-	402	4	ISM	ENSG00000215908.10	ENST00000639456.1	2575	13	-21	16758	-21	-5361	5prime_fragment	FALSE	canonical	3	47	junction_1	6.59966329107444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-21	True	NA	NA	False	AAAAAG	-20	NA	16644707	16635030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_16635169_16642766_16642851_16643027_16643146_16644645
transcript_96600.known	chrX	+	724	6	FSM	ENSG00000102317.18	ENST00000489344.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	384.572801950424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCAATAATTGGTTCT	7	True	NA	NA	False	NA	NA	NA	48574523	48577735	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48574574_48575167_48575284_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_96603.known	chrX	+	425	1	FSM	ENSG00000279528.1	ENST00000623114.1	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCGTTTTTTTAATGC	3702	False	NA	20	True	AATAAA	-25	NA	48580740	48581165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48580700_48581200
transcript_96605.known	chrX	+	5457	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.5614029303394	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTCGGTTAACTTG	-8	True	NA	NA	False	AATAAA	-38	NA	48597491	48608869	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_96607.nic	chrX	+	1676	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	48.9499618532241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTCCCAGCTCTGC	-12	True	NA	11	True	AATAAA	-20	NA	48597487	48605118	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_96608.nic	chrX	+	1751	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	48.9499618532241	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	-12	True	NA	26	True	NA	NA	NA	48597487	48605193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_9661.known	chr1	-	3218	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	11.7200682591869	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	-13	True	NA	-7	True	AATAAA	-27	NA	217631082	217608183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_96617.known	chrX	+	2124	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	20.5669638012031	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	-8	True	NA	26	True	NA	NA	NA	48597491	48605193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_9662.nnic	chr1	-	3174	6	NNC	ENSG00000092978.11	novel	3218	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	26.3013307648111	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	217631108	217608183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_217610193_217610320_217610401_217610958_217611072_217614140_217614203_217619782_217620500_217630915
transcript_96624.known	chrX	+	2736	6	FSM	ENSG00000101945.17	ENST00000376687.4	2736	6	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	10.571660229122	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATGTGAGGTGCTTGT	-13	True	NA	NA	False	AATAAA	-22	NA	48696733	48709016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48696804_48698901_48699048_48700090_48700754_48706264_48706412_48706497_48706628_48707436
transcript_96628.known	chrX	+	4118	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	31.6829599150646	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	1	True	NA	14	True	AATAAA	-19	NA	48802066	48824976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_9663.nic	chr1	-	771	2	ISM	ENSG00000092978.11	ENST00000366934.3	3218	6	-26	11738	-18	-11738	5prime_fragment	FALSE	canonical	3	71	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGTTGAAAATAATCAGA	NA	False	NA	-95	True	NA	NA	NA	217631108	217619921	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_217620500_217630915
transcript_96632.nic	chrX	+	772	6	ISM	ENSG00000094631.21	ENST00000477528.5	4832	28	-33	19127	6	0	5prime_fragment	FALSE	canonical	3	73	junction_1	36.0521843998391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGTGTCAGGTGC	-44	True	NA	NA	False	AGTAAA	-19	NA	48802021	48805855	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_96633.known	chrX	+	591	6	FSM	ENSG00000094631.21	ENST00000441703.6	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.3981273079871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCATGGTCTCT	-2	True	NA	NA	False	NA	NA	NA	48802185	48805745	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_96639.known	chrX	+	938	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	55.4366505321364	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	22	False	NA	25	True	AATAAA	-26	NA	48897951	48903143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_96641.known	chrX	+	1056	7	ISM	ENSG00000102103.18	ENST00000651767.1	1951	8	7715	-37	0	0	3prime_fragment	FALSE	canonical	3	39	junction_1	128.545279527834	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	6	False	NA	24	True	AATAAA	-25	NA	48897911	48903142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_48898094_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_96642.known	chrX	+	965	7	FSM	ENSG00000102103.18	ENST00000396763.6	962	7	-4	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	142.771865420171	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	22	False	NA	24	True	AATAAA	-25	NA	48898255	48903142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898347_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_96644.known	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	418.644538958769	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	0	True	NA	-7	True	TTTAAA	-14	NA	48897790	48893452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
transcript_96646.known	chrX	-	964	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	401.362851904469	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	5	True	NA	-1	True	TTTAAA	-20	NA	48897762	48893446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
transcript_96652.known	chrX	+	664	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	143.533132063646	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	10	True	NA	24	True	AATAAA	-25	NA	48897939	48903142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_96657.known	chrX	-	950	7	FSM	ENSG00000126768.12	ENST00000376582.7	950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	348.531681964973	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	-1	True	TTTAAA	-20	NA	48898143	48893446	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897723_48897822_48898066
transcript_96664.nnic	chrX	-	731	5	NIC	ENSG00000126768.12	novel	950	7	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	397.31811876631	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGACTCCTTGAAC	9	False	48897790	-3	True	TTTAAA	-18	NA	48897781	48893448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
transcript_96672.known	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	153.683310739976	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	6	False	NA	24	True	AATAAA	-25	NA	48897911	48903142	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_96673.known	chrX	-	865	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	67.7140125823304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	0	True	NA	-5	True	AATAAA	-18	NA	48911646	48903183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
transcript_96674.known	chrX	-	1739	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	59.4100627466051	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	7875	False	NA	-1	True	AATAAA	-18	NA	48911669	48903612	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
transcript_96675.known	chrX	-	3047	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	20.0166597280032	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	7586	False	NA	-5	True	AATAAA	-18	NA	48911958	48903183	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
transcript_96676.known	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	TRUE	canonical	3	1093	junction_1	94.5993657484023	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	-1	True	NA	-16	True	AATAAA	-17	NA	48919024	48913181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
transcript_96678.known	chrX	-	2888	9	FSM	ENSG00000068308.15	ENST00000376488.8	2888	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_7	38.3745928317161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTCTTTGCCTGCTGA	-15	True	NA	0	True	ATTAAA	-31	NA	48957607	48922023	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976
transcript_96679.known	chrX	-	2077	10	FSM	ENSG00000068308.15	ENST00000455452.5	2077	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	135.773504206249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTCTGTTCTGTGTGGG	1191	False	NA	-1	True	AATAAA	-22	NA	48957189	48922205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
transcript_9668.known	chr1	+	7765	5	FSM	ENSG00000067533.6	ENST00000366932.4	7765	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	28.995689334796	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTTCTTGATTTTT	-8	True	NA	20	True	AATAAA	-21	NA	218285292	218337983	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_218285456_218302293_218302560_218305027_218305126_218307430_218307633_218330947
transcript_96682.known	chrX	-	3031	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_16	30.8562084514608	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	-2	True	NA	-6	True	NA	NA	NA	49002264	48973722	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_96687.known	chrX	-	3279	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	59.5223788187847	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	104	False	NA	-1	True	AATAAA	-38	NA	49043410	49028725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
transcript_96688.known	chrX	-	3291	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_8	41.0016560942255	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	-3	True	NA	-1	True	AATAAA	-38	NA	49043357	49028725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
transcript_96692.nic	chrX	-	1540	11	NIC	ENSG00000196998.19	novel	1598	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	56.7587878658451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGGCTTGACCTCAGGG	-21	True	NA	-16	True	AATAAA	-16	NA	49079919	49074441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075664_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_96693.known	chrX	-	1381	11	FSM	ENSG00000196998.19	ENST00000376368.7	1381	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	57.8796164465522	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGTGCCCACTTTC	160	False	NA	-66	True	NA	NA	NA	49079929	49074703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_96696.known	chrX	-	1444	11	FSM	ENSG00000196998.19	ENST00000322995.13	1444	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	60.9695825801686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	0	True	NA	-2	True	AATAAA	-18	NA	49079898	49074639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_96698.nic	chrX	-	1342	11	NIC	ENSG00000196998.19	novel	1444	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	56.7587878658451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	-21	True	NA	-2	True	AATAAA	-18	NA	49079919	49074639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075664_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_967.known	chr1	-	1296	4	FSM	ENSG00000215908.10	ENST00000639481.1	1296	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	19.0262975904404	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	NA	False	NA	-4	True	AATAAA	-26	NA	16626386	16618252	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352
transcript_96706.known	chrX	-	1301	10	FSM	ENSG00000196998.19	ENST00000485908.6	1301	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	44.1134900002256	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCACTTCCCCCCAGC	-13	True	NA	-20	True	GGGGCT	-40	NA	49079911	49074657	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
transcript_96717.known	chrX	-	1658	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	7.52661942707349	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAATAGAAAGATGAAATC	-3	True	NA	-22	True	AATAAA	-15	NA	49123735	49113406	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
transcript_96721.known	chrX	+	1103	5	FSM	ENSG00000102007.11	ENST00000376327.6	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	6.37867541108654	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGAGGCCCGGTGCGGTGG	-4	True	NA	NA	False	ATTAAA	-19	NA	49171897	49175235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_49172097_49173128_49173282_49173387_49173484_49174334_49174426_49174671
transcript_96726.known	chrX	-	2795	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	12.4442506805352	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGGGAGTTGGTCT	-7	True	NA	-12	True	AATAAA	-18	NA	49186373	49174801	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
transcript_96727.known	chrX	-	2421	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	4.6696419087073	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCCGGCTCTGATTTC	-2	True	NA	-10	True	AATAAA	-16	NA	49200193	49187814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_96728.known	chrX	-	761	5	FSM	ENSG00000102003.12	ENST00000472598.5	761	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	15.5141064841002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATCTGTCTGAGCC	102	False	NA	NA	False	TATAAA	-3	NA	49200176	49189136	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49198967_49199034_49200150
transcript_96729.known	chrX	-	574	3	FSM	ENSG00000102003.12	ENST00000472737.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATTCTATACACATTT	-4	True	NA	NA	False	NA	NA	NA	49200195	49197376	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49197840_49198967_49199034_49200150
transcript_9673.known	chr1	+	492	2	FSM	ENSG00000067533.6	ENST00000491428.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATGTGAAGGTGGAT	41	False	NA	NA	False	NA	NA	NA	218285341	218302671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_218285456_218302293
transcript_96731.known	chrX	-	2062	2	FSM	ENSG00000102003.12	ENST00000494396.5	2062	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCAGACC	-4	True	NA	NA	False	NA	NA	NA	49200195	49197016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49199034_49200150
transcript_96734.known	chrX	+	2310	17	FSM	ENSG00000101997.13	ENST00000376227.4	2310	17	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	4.58087055045217	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	-2	True	NA	27	True	AATAAA	-18	NA	49235469	49250520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243185_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
transcript_96735.known	chrX	+	537	5	FSM	ENSG00000216649.5	ENST00000381698.5	560	5	27	-4	27	4	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGCATCTTTTGTGA	3	False	NA	NA	False	AATAAA	-24	NA	49551315	49558649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_49551397_49552435_49552528_49552992_49553114_49555935_49556062_49558532
transcript_96736.known	chrX	+	487	5	FSM	ENSG00000101951.17	ENST00000376141.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.26917420765551	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCTTTTGTAAAATT	0	True	NA	NA	False	AATAAA	-26	NA	49829259	49833973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_49829297_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_96737.known	chrX	-	2175	2	FSM	ENSG00000234390.4	ENST00000437322.2	2175	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCGGTGAAACCTAAA	1797	False	NA	NA	False	AATAAA	-23	NA	49879241	49876723	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_49878748_49879090
transcript_96738.nic	chrX	-	1675	2	ISM	ENSG00000158352.18	ENST00000289292.11	6261	10	108	102909	0	-7517	5prime_fragment	FALSE	canonical	2	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCCAACTT	115	False	50814225	NA	False	NA	NA	NA	50814194	50694555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_50695938_50813901
transcript_96739.known	chrX	+	1925	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	1	True	NA	NA	False	AATAAA	-15	NA	51332821	51337525	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51333460_51336238
transcript_96740.known	chrX	-	2381	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGAGTTTACTTGTA	-5	True	NA	-13	True	AATAAA	-15	NA	51496592	51490010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_51491750_51495950
transcript_96743.known	chrX	-	1893	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGATACTCTTTCCA	1	True	NA	-8	True	AATAAA	-31	NA	51618912	51617019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_51617000_51618900
transcript_96744.known	chrX	-	1620	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51682831	51681211	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_51681200_51682800
transcript_96745.known	chrX	+	2791	1	FSM	ENSG00000189369.9	ENST00000340438.6	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTCAGGCCGTCTT	14	True	NA	NA	False	AATAAA	-36	NA	51743441	51746232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51743400_51746200
transcript_96747.known	chrX	+	2875	14	FSM	ENSG00000179222.18	ENST00000375695.2	2875	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	579.60744724288	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-1	True	NA	21	True	AATAAA	-21	NA	51893638	51902354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51893756_51894268_51894350_51894626_51894795_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_9675.known	chr1	+	1857	5	FSM	ENSG00000143353.12	ENST00000366928.10	1857	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	29.8695078633713	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTCTCTGCATCGA	1	True	NA	13	True	AATAAA	-18	NA	219173877	219212858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_96750.known	chrX	+	2701	13	FSM	ENSG00000179222.18	ENST00000375772.7	2701	13	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	409.888695935318	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	NA	False	NA	21	True	AATAAA	-21	NA	51803006	51902354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51803118_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_96752.known	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	187.839026828825	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-17	True	NA	21	True	AATAAA	-21	NA	51893622	51902354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_96755.nic	chrX	+	2930	12	ISM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	intron_retention	FALSE	canonical	3	1274	junction_1	163.985838937089	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-17	True	NA	21	True	AATAAA	-21	NA	51893622	51902354	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552
transcript_96763.known	chrX	+	2942	4	FSM	ENSG00000179304.18	ENST00000593751.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	47.814456205443	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	69	False	NA	NA	False	AATAAA	-16	NA	52897399	52908556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_52898727_52899467_52899542_52900567_52900661_52907108
transcript_96765.known	chrX	-	2942	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	46.4207807871527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	53	False	NA	NA	False	AATAAA	-16	NA	52958414	52947257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
transcript_96766.known	chrX	-	1733	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	56.2751178487339	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
transcript_96768.known	chrX	+	2815	7	FSM	ENSG00000184205.14	ENST00000375442.8	2815	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	24.438130497692	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCGCTTCGAGTCTTT	0	True	NA	16	True	AATAAA	-17	NA	53082366	53088540	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
transcript_96769.known	chrX	+	4343	4	FSM	ENSG00000232593.7	ENST00000603385.2	4343	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTATTTTCTTTTTTGTA	-27	True	NA	12	True	ATTAAA	-23	NA	53094147	53170914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_53094285_53094399_53094475_53099471_53099609_53166920
transcript_96773.known	chrX	-	922	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	-5	True	NA	-6	True	AATAAA	-14	NA	53281584	53266327	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53267065_53279563_53279660_53281495
transcript_96774.known	chrX	-	835	2	FSM	ENSG00000124313.18	ENST00000485377.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGTCTGATGTATATT	27	False	NA	-7	True	AATAAA	-13	NA	53281594	53266328	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53267065_53281495
transcript_96775.known	chrX	-	9710	25	FSM	ENSG00000072501.19	ENST00000322213.9	9710	25	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_22	49.9894259652312	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	13	True	NA	-4	True	AATAAA	-14	NA	53422654	53374148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_96777.nic	chrX	-	2622	16	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-36	25470	-21	5180	5prime_fragment	FALSE	canonical	3	352	junction_13	43.2488407037948	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAATGAGATAGAAAA	-23	False	NA	NA	False	GATAAA	-31	NA	53422690	53399618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_96778.nic	chrX	-	2310	14	NIC	ENSG00000072501.19	novel	9930	26	NA	NA	-11	5180	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	101.972208767618	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAATGAGATAGAAAA	-13	True	NA	NA	False	GATAAA	-31	NA	53422680	53399618	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53422491
transcript_9678.known	chr1	+	1819	5	FSM	ENSG00000143353.12	ENST00000366927.3	1819	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	90.6542194274486	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	-2	True	NA	20	True	AATAAA	-25	NA	219173874	219212865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219193129_219193252_219210531_219210648_219211491
transcript_96783.known	chrX	+	1488	8	FSM	ENSG00000158423.17	ENST00000375327.6	1488	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	3.77424137532083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACATGTTGTAACAGGA	0	True	NA	10	True	AATAAA	-20	NA	53422872	53431115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53428282_53428628_53429853_53429973_53430395_53430791_53430906
transcript_96784.nic	chrX	+	1110	7	NIC	ENSG00000158423.17	novel	1488	8	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	4.01732359773132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACATGTTGTAACAGGA	1	True	NA	10	True	AATAAA	-20	NA	53422905	53431115	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53429853_53429973_53430395_53430791_53430906
transcript_96786.known	chrX	-	901	6	FSM	ENSG00000072506.14	ENST00000495986.2	901	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	416.22945594948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGAGAAGGCAGAGAAA	0	True	NA	NA	False	NA	NA	NA	53434348	53431405	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434177
transcript_96787.known	chrX	-	916	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	306.038821066871	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	43	False	NA	-2	True	AATAAA	-20	NA	53434356	53431257	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96789.known	chrX	-	954	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_5	72.560595366907	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	-1	True	NA	-5	True	AATAAA	-17	NA	53434370	53431260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96790.known	chrX	-	1154	5	FSM	ENSG00000072506.14	ENST00000684692.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_4	78.3848677998502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	2	True	NA	-5	True	AATAAA	-17	NA	53434367	53431260	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96791.known	chrX	-	823	5	FSM	ENSG00000072506.14	ENST00000375298.4	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	350.819308904171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTAGGCAGTGTTGT	-2	True	NA	-7	True	AATAAA	-15	NA	53434350	53431262	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53431595_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_96792.known	chrX	-	14796	83	FSM	ENSG00000086758.16	ENST00000342160.7	14796	83	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_67	190.389939258488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	-16	True	NA	2	True	AATAAA	-27	NA	53684169	53532095	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
transcript_96797.nnic	chrX	-	978	8	NNC	ENSG00000086758.16	novel	5488	41	NA	NA	372	-1625	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	25.1898910725096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAAAAGGGTGAGTCTG	-4	True	NA	NA	False	NA	NA	NA	53686347	53632497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686165
transcript_968.nic	chr1	-	1859	3	ISM	ENSG00000215908.10	ENST00000639456.1	2575	13	22	16758	8	-5361	intron_retention	FALSE	canonical	3	47	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	22	True	NA	NA	False	AAAAAG	-20	NA	16644664	16635030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_16635169_16642766_16642851_16643027
transcript_9680.known	chr1	+	2169	5	FSM	ENSG00000143353.12	ENST00000483635.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	92.5270230797468	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	19	False	NA	20	True	AATAAA	-25	NA	219173895	219212865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219174305_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_96801.nnic	chrX	-	1022	3	NNC	ENSG00000196632.11	novel	11172	23	NA	NA	-42	22003	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	4	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAATGTATTGTATT	-20	True	NA	NA	False	ATTAAA	-2	NA	54358047	54311174	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_54311292_54333136_54333793_54357798
transcript_96802.nic	chrX	-	861	2	ISM	ENSG00000196632.11	ENST00000354646.6	11341	24	-42	140469	-42	-116	5prime_fragment	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGGAAGAAGAAGCAG	-20	True	NA	NA	False	AATGAA	-3	NA	54358047	54333293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_54333793_54357685
transcript_96803.nnic	chrX	-	840	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-134	-116	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGGAAGAAGAAGCAG	NA	False	NA	NA	False	AATGAA	-3	NA	54358139	54333293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_54333793_54357798
transcript_96804.nnic	chrX	-	795	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-18	-122	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGGAAATGGAAGAAG	4	True	NA	NA	False	NA	NA	NA	54358023	54333299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_54333793_54357721
transcript_96805.known	chrX	+	4076	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_1	56.3293884220306	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	-8	True	NA	NA	False	AATAAA	-25	NA	54440403	54448032	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
transcript_96811.known	chrX	+	2638	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	12.7058057595731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	-5	True	NA	-33	True	NA	NA	NA	54530182	54621521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
transcript_96813.nnic	chrX	+	2335	17	NNC	ENSG00000130119.17	novel	2357	16	NA	NA	5	-2013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	13.2781246322664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCAACATTTTGTGTT	0	True	NA	5	True	AGTAAA	-16	NA	54530187	54565276	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560745_54564994
transcript_96823.known	chrX	+	2357	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	8.25590697622012	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-39	True	NA	NA	False	NA	NA	NA	54530210	54561071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_96824.known	chrX	+	8684	16	FSM	ENSG00000130119.17	ENST00000360845.3	8684	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	9.89185972852875	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTCTGCATTTTTT	-31	True	NA	NA	False	AATAAA	-26	NA	54530218	54567289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_96827.nnic	chrX	+	567	5	NNC	ENSG00000130119.17	novel	2575	9	NA	NA	5	-2004	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	23.9204410494456	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTGTTTTCATTTAT	0	True	NA	14	True	AGTAAA	-25	NA	54530187	54565285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540171_54564997
transcript_9684.known	chr1	+	1662	4	FSM	ENSG00000143353.12	ENST00000474379.5	1662	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	124.835892274618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	50	False	NA	20	True	AATAAA	-25	NA	219173926	219212865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219210514_219210648_219211491
transcript_96847.known	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_1	244.142532936989	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	5	True	NA	34	True	ATTAAA	-19	NA	54807744	54816015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_9685.known	chr1	+	1703	4	FSM	ENSG00000143353.12	ENST00000460522.5	1703	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	117.318180839781	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	-8	True	NA	20	True	AATAAA	-25	NA	219173868	219212865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219173982_219179146_219179247_219210531_219210648_219211491
transcript_96855.known	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_1	311.79373523747	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	-8	True	NA	26	True	ATTAAA	-11	NA	54808370	54816007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_96862.nic	chrX	+	2187	13	NIC	ENSG00000102316.17	novel	2026	12	NA	NA	-30	0	intron_retention	FALSE	canonical	3	133	junction_1	476.034750132103	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	621	False	NA	34	True	ATTAAA	-19	NA	54809029	54816015	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_96864.known	chrX	+	2066	12	FSM	ENSG00000102316.17	ENST00000375053.6	2066	12	0	0	0	0	multi-exon	TRUE	canonical	3	1016	junction_1	253.52526077541	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	13	True	NA	30	True	NA	NA	NA	54807598	54815694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_96868.known	chrX	+	1958	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_1	323.843804815462	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	-7	True	NA	30	True	NA	NA	NA	54808337	54815694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_96871.known	chrX	+	2026	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	494.626296868372	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	651	False	NA	30	True	NA	NA	NA	54809059	54815694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_96879.known	chrX	+	2597	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	128.650896827181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	253	False	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_9688.known	chr1	+	1701	4	FSM	ENSG00000143353.12	ENST00000469590.5	1701	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	109.63880091768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	22	True	NA	20	True	AATAAA	-25	NA	219174193	219212865	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_219174305_219179146_219179247_219210531_219210648_219211491
transcript_96881.known	chrX	+	2326	13	FSM	ENSG00000067445.22	ENST00000319167.12	2326	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	154.52471934577	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	248	False	NA	NA	False	ATTAAA	-14	NA	54920810	54931431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_96883.known	chrX	+	2306	13	FSM	ENSG00000067445.22	ENST00000375022.8	2306	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	129.540292959372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	253	False	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_96884.nic	chrX	+	3034	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_11	133.886845881139	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	233	False	NA	NA	False	ATTAAA	-14	NA	54920795	54931431	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_96891.known	chrX	-	1940	11	FSM	ENSG00000158578.21	ENST00000650242.1	1940	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.20415945787923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGCCTTTTATTGGAC	-1	True	NA	0	True	AATAAA	-16	NA	55030977	55009054	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55009344_55013485_55013649_55014746_55015016_55015577_55015743_55017485_55017666_55020319_55020505_55021051_55021275_55023756_55023868_55024717_55024841_55025819_55026016_55030941
transcript_96892.known	chrX	-	1795	10	FSM	ENSG00000158578.21	ENST00000335854.8	1795	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.33333333333333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGAGCCTAAAAATAAAG	-1	True	NA	-34	True	NA	NA	NA	55030977	55009088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55009344_55013485_55013649_55014746_55015016_55015577_55015743_55017485_55017666_55020319_55020505_55021051_55021275_55024717_55024841_55025819_55026016_55030941
transcript_96894.known	chrX	+	3239	6	FSM	ENSG00000169188.5	ENST00000374987.4	3239	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	12.9861464645983	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGCTTTATTTT	-2	True	NA	3	True	AATAAA	-14	NA	55000362	55009057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55000580_55001545_55001630_55002250_55002432_55002961_55003109_55003798_55003869_55006517
transcript_96897.known	chrX	+	728	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	82.965354214877	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGCCTGAGGTGAT	28	True	NA	NA	False	NA	NA	NA	55000392	55006757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
transcript_96900.nic	chrX	-	1174	4	NIC	ENSG00000182518.14	novel	1179	4	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	113.845899745616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	-19	True	NA	-5	True	AATAAA	-22	NA	55161143	55143101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_55143876_55146180_55146312_55159128_55159229_55160974
transcript_96901.known	chrX	-	342	3	FSM	ENSG00000182518.14	ENST00000478918.1	342	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	140	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGAGAGAGCAAGTGGA	235	False	NA	NA	False	AATGAA	-23	NA	55160941	55146268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55146312_55159128_55159229_55160742
transcript_96902.nnic	chrX	-	839	3	NNC	ENSG00000182518.14	novel	712	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	140	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	4	True	NA	-66	True	NA	NA	NA	55161120	55145937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_55146312_55159128_55159229_55160755
transcript_96903.nnic	chrX	-	779	3	NNC	ENSG00000182518.14	novel	712	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	-15	True	NA	-66	True	NA	NA	NA	55161139	55145937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_55146312_55159128_55159229_55160834
transcript_96904.known	chrX	-	712	3	FSM	ENSG00000182518.14	ENST00000489298.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	22	True	NA	-66	True	NA	NA	NA	55161102	55145937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55146312_55159128_55159229_55160864
transcript_96905.known	chrX	-	1170	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	116	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGTGCACTTCA	5	True	NA	NA	False	NA	NA	NA	55161119	55145386	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_55146312_55159128_55159229_55160974
transcript_96906.known	chrX	+	1440	1	FSM	ENSG00000187601.5	ENST00000342972.3	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCGCATTTTCTGAC	-25	True	NA	22	True	AATAAA	-17	NA	55452126	55453566	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55452100_55453600
transcript_9691.known	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_18	108.138231959092	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	181	False	220046529	-16	True	AATAAA	-14	NA	220046505	219968599	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_96913.known	chrX	+	1573	11	FSM	ENSG00000083750.13	ENST00000262850.7	1573	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	26.528475267154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATATTGTTTCACACA	82	False	NA	NA	False	NA	NA	NA	55717884	55758348	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_96920.known	chrX	+	2051	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.1695836178605	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	-13	True	NA	NA	False	AATAAA	-17	NA	55717748	55758774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_96923.nic	chrX	+	1294	6	ISM	ENSG00000083750.13	ENST00000262850.7	1573	11	-129	26640	7	0	5prime_fragment	FALSE	canonical	3	4	junction_4	33.2661990615099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	-6	True	NA	NA	False	AATAAA	-24	NA	55717755	55731708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363
transcript_96924.nic	chrX	+	1274	5	ISM	ENSG00000083750.13	ENST00000374941.9	2051	10	-57	27066	-57	0	5prime_fragment	FALSE	canonical	3	52	junction_3	11.202678251204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	NA	False	NA	NA	False	AATAAA	-24	NA	55717691	55731708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363
transcript_96926.nic	chrX	+	2118	2	ISM	ENSG00000083750.13	ENST00000262850.7	1573	11	-193	37645	-57	-11005	5prime_fragment	FALSE	canonical	3	76	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCGGACATGATGGTGCA	NA	False	NA	NA	False	AATATA	-19	NA	55717691	55720703	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_55718420_55719313
transcript_96927.known	chrX	+	1320	5	FSM	ENSG00000227486.3	ENST00000661602.1	1320	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	12.4498995979887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGATTTTCTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	55908293	56205283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55908801_55985998_55986225_56002824_56002984_56014844_56014962_56204972
transcript_96928.nnic	chrX	+	974	4	FSM	ENSG00000227486.3	ENST00000691133.1	833	4	-141	0	7	0	multi-exon	FALSE	canonical	0	0	junction_3	14.0554457615387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGATTTTCTTATTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	55908300	56205285	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55908801_56014844_56014962_56071764_56071809_56204972
transcript_96933.known	chrX	+	956	3	FSM	ENSG00000227486.3	ENST00000669152.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	NA	False	NA	NA	False	NA	NA	NA	55908242	56205253	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55908801_56014844_56014962_56204972
transcript_96935.known	chrX	+	7897	3	FSM	ENSG00000227486.3	ENST00000658575.1	7897	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAGAGAATAGAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	55908231	56021946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55908801_55985998_55986225_56014844
transcript_96939.known	chrX	+	911	2	FSM	ENSG00000227486.3	ENST00000653318.2	926	2	0	15	0	5	multi-exon	FALSE	canonical	3	32	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCCCCATTCAACATCA	NA	False	NA	9	True	AATAAA	-24	NA	55908223	56015178	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_55908801_56014844
transcript_9694.nic	chr1	-	3223	22	NIC	ENSG00000136628.18	novel	2968	21	NA	NA	0	-1726	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	232.728516426923	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAAATCTTGCTGATTG	-1	True	NA	NA	False	NA	NA	NA	220046530	219984235	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_96945.known	chrX	+	1908	7	FSM	ENSG00000102349.18	ENST00000358094.7	1908	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.0282965678168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	298	False	NA	29	True	AATAAA	-23	NA	56233188	56285097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56268912_56268992_56269377_56269490_56270181_56270322_56284312
transcript_96949.nnic	chrX	+	1965	7	NNC	ENSG00000102349.18	novel	1908	7	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	19.7603699920377	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	-8	True	NA	29	True	AATAAA	-23	NA	56232383	56285097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_56232489_56233157_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_9695.known	chr1	-	2968	21	FSM	ENSG00000136628.18	ENST00000609181.5	2968	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	235.076854454027	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	24	True	NA	NA	False	NA	NA	NA	220046451	219987295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_96950.nnic	chrX	+	2232	7	NNC	ENSG00000102349.18	novel	1908	7	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	20.0471666050065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	-8	True	NA	29	True	AATAAA	-23	NA	56232383	56285097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_56232756_56233157_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_96952.known	chrX	+	9096	6	FSM	ENSG00000102349.18	ENST00000468660.6	9096	6	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	13.9226434271657	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCATTTTCTTGACT	2	True	NA	19	True	AATAAA	-21	NA	56232355	56291531	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_96957.nic	chrX	+	2841	3	ISM	ENSG00000102349.18	ENST00000358094.7	1908	7	-771	18075	-3	-2186	5prime_fragment	FALSE	canonical	3	32	junction_1	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAACAAACAAAAAAGGAA	-13	True	NA	NA	False	NA	NA	NA	56232417	56267022	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_56233342_56250230_56250305_56265179
transcript_96958.known	chrX	+	4950	2	FSM	ENSG00000102349.18	ENST00000476898.1	4950	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATTCTCTTCCTTCCA	-10	True	NA	NA	False	AATAAA	-1	NA	56232420	56269208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56233342_56265179
transcript_96959.known	chrX	-	1717	6	FSM	ENSG00000204271.13	ENST00000475785.7	1717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.4794843916918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACTTGTATAAGAGAT	8	True	NA	-70	True	NA	NA	NA	56995527	56976438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978291_56978418_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_96960.known	chrX	-	2998	6	FSM	ENSG00000204271.13	ENST00000639956.1	2998	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24.8306262506607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	2	True	NA	-26	True	NA	NA	NA	56995533	56975141	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978291_56978422_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_96961.known	chrX	-	856	6	FSM	ENSG00000204271.13	ENST00000638834.1	856	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.1382302215331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATAGTCTCTGGTAA	154	False	NA	NA	False	NA	NA	NA	56995381	56977088	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978291_56978418_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_96962.known	chrX	-	2938	5	FSM	ENSG00000204271.13	ENST00000640131.1	2938	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	7.03562363973514	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	-20	True	NA	-4	True	AATAAA	-15	NA	56995555	56975119	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_96963.known	chrX	-	1620	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.356157588604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCTCTAACAGTGTGA	10	True	NA	-13	True	AATAAA	-20	NA	56995525	56976381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_96964.known	chrX	-	2543	5	FSM	ENSG00000204271.13	ENST00000640187.1	2543	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	19.422924599555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGACATCGCATTTT	28	False	NA	NA	False	NA	NA	NA	56995507	56975401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_96966.known	chrX	+	896	4	FSM	ENSG00000204272.13	ENST00000637096.1	896	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	502.329462493381	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTGTGTTAGATCTAT	-29	True	NA	17	True	AATAAA	-11	NA	56729240	56817569	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56729590_56732062_56732200_56811019_56811180_56817319
transcript_96967.known	chrX	+	2344	3	FSM	ENSG00000204272.13	ENST00000374922.9	2344	3	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_2	31	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGATAAACTGG	-27	True	NA	NA	False	AATAAA	-1	NA	56729242	56819179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56729590_56732062_56732200_56817319
transcript_9697.nic	chr1	-	3026	20	ISM	ENSG00000136628.18	ENST00000366923.8	4862	32	-25	18696	0	0	5prime_fragment	FALSE	canonical	3	586	junction_6	75.3652233958536	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	-1	True	NA	NA	False	NA	NA	NA	220046530	219987295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_96970.known	chrX	+	543	2	FSM	ENSG00000204272.13	ENST00000423617.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATAAGAACTCCTATG	84	False	NA	9	True	AGTAAA	-20	NA	56729353	56817626	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_56729590_56817319
transcript_96976.known	chrX	-	725	3	FSM	ENSG00000186787.10	ENST00000374910.3	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	201	False	NA	-3	True	AATACA	-18	NA	57121315	57119681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57120102_57120404_57120632_57121237
transcript_96978.nic	chrX	-	893	3	NIC	ENSG00000186787.10	novel	1152	2	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	-19	True	NA	-3	True	AATACA	-18	NA	57121535	57119681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_57120102_57120404_57120635_57121292
transcript_96979.nnic	chrX	-	1428	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	-10	0	intron_retention	FALSE	canonical	3	54	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	-42	True	NA	-3	True	AATACA	-18	NA	57121558	57119681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_57120632_57121080
transcript_96980.known	chrX	-	1258	2	FSM	ENSG00000186787.10	ENST00000333933.3	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	-30	True	NA	-4	True	AATACA	-17	NA	57121546	57119682	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57120632_57121237
transcript_96981.known	chrX	-	1152	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	25	True	NA	-3	True	AATACA	-18	NA	57121491	57119681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57120635_57121292
transcript_96984.nnic	chrX	-	1115	2	NNC	ENSG00000147059.9	novel	1091	2	NA	NA	-189	0	intron_retention	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	405	False	NA	-12	True	AATACA	-18	NA	57137186	57135649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_57136603_57137024
transcript_96985.known	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	18	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	-12	True	AATACA	-18	NA	57137625	57135649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_57136603_57137259
transcript_96986.known	chrX	+	1980	11	FSM	ENSG00000165591.7	ENST00000374900.5	1980	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	4.86312656631513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	9	True	NA	9	True	AATAAA	-16	NA	57286705	57489193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
transcript_96987.nnic	chrX	+	1869	10	NIC	ENSG00000165591.7	novel	1980	11	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	8.96908269804914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	0	True	NA	9	True	AATAAA	-16	NA	57286696	57489193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57446927_57447040_57448523_57448719_57488756
transcript_96994.known	chrX	-	653	5	FSM	ENSG00000235437.9	ENST00000671338.1	653	5	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_3	20.3638773321782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACTAAAGTAAGAAATAA	109	False	NA	NA	False	NA	NA	NA	63560942	63426891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63426997_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_96996.known	chrX	-	980	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	5.73488351136175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-20	True	NA	-1	True	AATAAA	-17	NA	63561071	63426557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
transcript_96997.known	chrX	-	2973	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	12.684198393627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTCTGTTCCGTTCT	-29	True	NA	-2	True	AATAAA	-16	NA	63561080	63426558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
transcript_96999.known	chrX	-	816	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-29	True	NA	-1	True	AATAAA	-17	NA	63561080	63426557	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63426997_63432363_63432492_63560831
transcript_97.known	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_2	5.5	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_+_1347_1678_1886_2389
transcript_970.nnic	chr1	-	318	3	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-21	-5361	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-21	True	NA	NA	False	AAAAAG	-20	NA	16644707	16635030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_16635169_16643027_16643146_16644645
transcript_97000.known	chrX	-	2814	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	0	2	0	0	multi-exon	FALSE	canonical	3	50	junction_2	14	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTTCTGTTCCGTTC	NA	False	NA	-3	True	AATAAA	-15	NA	63561095	63426559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63428982_63432363_63432492_63560831
transcript_97002.known	chrX	-	667	2	FSM	ENSG00000235437.9	ENST00000608788.6	667	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTTGGAAAGCTAAGT	16	True	NA	NA	False	AATAAA	-33	NA	63561035	63399440	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63399904_63560831
transcript_97003.known	chrX	-	4105	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTATCTTTGTATT	-9	True	NA	-9	True	AATAAA	-20	NA	63351332	63347227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63347200_63351300
transcript_97006.known	chrX	-	5413	10	FSM	ENSG00000131089.17	ENST00000253401.10	5413	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	49.1709037722287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	-18	True	NA	-1	True	AATAAA	-16	NA	63755113	63634966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754303
transcript_97007.known	chrX	-	5285	10	FSM	ENSG00000131089.17	ENST00000624538.2	5285	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	43.5237979461159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATGGAGTTCAATAA	169	False	NA	-37	True	NA	NA	NA	63755032	63635002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
transcript_97008.known	chrX	-	1761	10	FSM	ENSG00000131089.17	ENST00000635729.1	1761	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	50.6062017377415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	False	NA	87	True	NA	NA	NA	63755216	63637867	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63755157
transcript_97009.known	chrX	-	4702	10	FSM	ENSG00000131089.17	ENST00000671741.2	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	25.2004311152619	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	-27	True	NA	-1	True	AATAAA	-16	NA	63785214	63634966	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_9701.nic	chr1	-	871	7	ISM	ENSG00000136628.18	ENST00000609181.5	2968	21	-79	37857	0	-23952	5prime_fragment	FALSE	canonical	3	653	junction_2	79.8094953971992	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAGATTTTGAGAA	-1	True	NA	10	True	TTTAAA	-43	NA	220046530	220025152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_97010.known	chrX	-	2143	9	FSM	ENSG00000131089.17	ENST00000623517.3	2143	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	47.3286382647969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCATTGCTTTTCTTG	-16	True	NA	NA	False	NA	NA	NA	63785558	63637689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63785115
transcript_97011.known	chrX	-	4886	9	FSM	ENSG00000131089.17	ENST00000672513.1	4886	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	61.2367332570901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATGGAGTTCAATAA	436	False	NA	-37	True	NA	NA	NA	63754765	63635002	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
transcript_97014.nic	chrX	-	1446	9	NIC	ENSG00000131089.17	novel	3758	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	53.7213586481206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATAGATGGACCTTTT	-30	True	NA	-27	True	AATAAA	-14	NA	63785217	63637981	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_63638210_63643979_63644049_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_97019.nic	chrX	-	1602	11	ISM	ENSG00000102043.16	ENST00000374852.4	2660	14	-26	63341	-26	0	5prime_fragment	FALSE	canonical	3	25	junction_5	7.53923072998831	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCACTCAATGTTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	64395478	64331421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_97024.nnic	chrX	-	1834	7	Fusion	ENSG00000102043.16_ENSG00000198881.10	novel	1267	3	NA	NA	-26	0	multi-exon	FALSE	canonical	0	0	junction_2	17.8667910443432	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCAGTGTCTGCTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	64395478	64224193	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chrX_-_64224469_64224827_64225675_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_97026.known	chrX	-	2724	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	37.1306813834597	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAAAATATTAGCACTT	-8	True	NA	4	True	AATAAA	-35	NA	64976450	64915806	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
transcript_97027.known	chrX	-	606	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	70.6275442019613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAAGAGTCGGTCCCG	61	False	NA	-42	True	NA	NA	NA	65034669	64917839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
transcript_97033.known	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	217.568951187227	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	-21	True	NA	-1	True	AATAAA	-13	NA	65534787	65512581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_97037.known	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_5	75.8423071613434	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	12	True	NA	-1	True	AATAAA	-13	NA	65534754	65512581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_97040.known	chrX	-	2261	12	FSM	ENSG00000001497.18	ENST00000374804.9	2261	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	220.125283636087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGTGTTTGTGAGAT	10	True	NA	-2	True	AATAAA	-12	NA	65534756	65512582	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65534479
transcript_97045.known	chrX	-	2324	12	FSM	ENSG00000001497.18	ENST00000678823.1	2324	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	299.848088259802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAACACAGAACTTGGC	-32	True	NA	NA	False	NA	NA	NA	65534798	65520494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_97048.known	chrX	-	2301	11	FSM	ENSG00000001497.18	ENST00000676986.1	2301	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	240.481371419908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCCCAGAGAAAAAATAAAA	-32	True	NA	NA	False	NA	NA	NA	65534798	65520466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_97052.known	chrX	+	3960	13	FSM	ENSG00000147065.17	ENST00000360270.7	3960	13	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_6	68.1229994609424	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCAATCGTTCTTT	0	True	NA	24	True	AATAAA	-17	NA	65667653	65741931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_65667854_65716817_65716902_65727813_65727910_65729437_65729713_65731106_65731191_65731837_65731985_65733183_65733281_65735266_65735431_65736794_65736926_65737177_65737339_65738524_65738618_65738969_65739195_65739728
transcript_97061.known	chrX	-	3296	9	FSM	ENSG00000079482.14	ENST00000679914.1	3296	9	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1.86664806538351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAGAAAGAAAG	-34	True	NA	NA	False	AAGAAA	-44	NA	68433522	68208047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_68210283_68212107_68212213_68213861_68213973_68234486_68234589_68274737_68274810_68283055_68283118_68299000_68299097_68432866_68433025_68433167
transcript_97065.known	chrX	-	1247	2	FSM	ENSG00000079482.14	ENST00000681349.1	1247	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGATTGTGAAAAATAA	537	False	NA	NA	False	NA	NA	NA	68433295	68431905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_68433025_68433167
transcript_97069.known	chrX	+	6010	7	FSM	ENSG00000181704.12	ENST00000462683.6	6010	7	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_6	25.660713595343	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTGTGTGCCTATTC	8	True	NA	18	True	ATTAAA	-26	NA	68499050	68537282	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_68499124_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_9707.known	chr1	-	2400	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.79038842777054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	14	True	NA	48	True	ATTAAA	-21	NA	220089788	220057481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_97071.known	chrX	+	734	7	FSM	ENSG00000181704.12	ENST00000374643.7	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	111.660198817663	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTCTCACCTTTACT	6	True	NA	-45	True	NA	NA	NA	68499048	68531970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_68499158_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_97073.known	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	117.114644686307	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	NA	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_97076.known	chrX	+	3303	5	FSM	ENSG00000090776.6	ENST00000204961.5	3303	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	9.36416040016402	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGTGTAAAATGGTG	16	True	NA	81	True	ACTAAA	-23	NA	68829020	68842160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_68829905_68838616_68838895_68839663_68839757_68839959_68840089_68840241
transcript_97077.known	chrX	-	887	2	FSM	ENSG00000181191.12	ENST00000477231.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGAGGGAGAGGCGAG	20	True	NA	NA	False	NA	NA	NA	69165449	69162325	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_69163135_69165371
transcript_97078.known	chrX	-	2755	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATAATGGAATTTT	-3	True	NA	-19	True	ATTAAA	-18	NA	69165521	69160861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_69163467_69165371
transcript_97079.known	chrX	+	1682	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	110.561697205175	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	-16	True	NA	30	True	AATAAA	-33	NA	70133446	70166324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_97081.known	chrX	+	1862	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	10.2683981223947	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	-14	True	NA	30	True	AATAAA	-33	NA	70133448	70166324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_97082.known	chrX	+	1310	17	FSM	ENSG00000120500.19	ENST00000307959.9	1310	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCGATCTCTTGCCTAT	2	True	NA	NA	False	AATAAA	-19	NA	70268333	70281840	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70268373_70269355_70269394_70269661_70269693_70269842_70269904_70270099_70270145_70276081_70276282_70276432_70276493_70276668_70276737_70277393_70277530_70277715_70277801_70278065_70278139_70278503_70278642_70280194_70280279_70280558_70280583_70280765_70280819_70281098_70281109_70281675
transcript_97083.known	chrX	+	4388	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	26.2412948528756	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	5	True	NA	9	True	AATAAA	-21	NA	70290103	70420886	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
transcript_9709.known	chr1	-	1152	11	FSM	ENSG00000162813.18	ENST00000354807.7	1152	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.0410503232817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTCTTTGTTATTCACC	30	True	NA	-3	True	AATAAA	-11	NA	220089772	220057730	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220057918_220058945_220058993_220059685_220059792_220062756_220062955_220066072_220066118_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_97090.nic	chrX	+	2534	21	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-112	25094	-112	-25094	5prime_fragment	FALSE	canonical	3	171	junction_12	21.9259549392951	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCTGGGGAGAATCCAC	7853	False	NA	NA	False	AAGAAA	-5	NA	70289991	70395792	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670
transcript_97093.nic	chrX	+	2111	18	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-39	44706	-39	-44706	5prime_fragment	FALSE	canonical	3	171	junction_12	22.0439950159443	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGAAGTAATACAGTT	25	False	NA	NA	False	AATGAA	-41	NA	70290064	70376180	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099
transcript_97095.nic	chrX	+	1823	16	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-37	46692	-37	-46692	5prime_fragment	FALSE	canonical	3	171	junction_12	21.5505607042292	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAAGAATTGGTTC	27	False	NA	NA	False	CATAAA	-34	NA	70290066	70374194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150
transcript_97096.nic	chrX	+	1393	11	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-59	78955	-59	44743	5prime_fragment	FALSE	canonical	3	196	junction_1	17.4631039623545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCCCCCAAGAATAAAC	5	True	NA	NA	False	NA	NA	NA	70290044	70341931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798
transcript_97098.nic	chrX	+	847	6	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-112	118836	-112	4862	5prime_fragment	FALSE	canonical	3	196	junction_1	21.3541565040626	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGTGACAAGTAA	7853	False	NA	NA	False	NA	NA	NA	70289991	70302050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899
transcript_971.nnic	chr1	-	1222	3	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	-2938	-5361	intron_retention	FALSE	canonical	1	1	junction_2	31.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	NA	False	NA	NA	False	AAAAAG	-20	NA	16647624	16635030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_16635169_16643027_16643146_16646658
transcript_9710.known	chr1	+	3530	23	FSM	ENSG00000067704.10	ENST00000366922.3	3530	23	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_19	42.574412250933	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGATTTTGGTGCAGA	4	True	NA	22	True	AATAAA	-18	NA	220094131	220148041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_220094484_220096103_220096227_220100489_220100650_220102128_220102278_220102362_220102413_220102494_220102605_220102686_220102778_220103446_220103563_220105890_220106061_220107060_220107152_220110785_220110938_220114313_220114475_220125236_220125340_220126749_220126844_220134401_220134511_220136808_220136912_220137917_220138044_220139007_220139140_220140182_220140290_220141802_220141949_220142943_220143135_220145508_220145654_220147492
transcript_97100.nic	chrX	+	923	6	NIC	ENSG00000090889.12	novel	4388	31	NA	NA	-3	4862	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	90.7092057070284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGTGACAAGTAA	2	True	NA	NA	False	NA	NA	NA	70290100	70302050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_70290336_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899
transcript_97102.known	chrX	-	784	8	FSM	ENSG00000120509.11	ENST00000374454.1	784	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	140.820771890792	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGAGGATGATGATA	-25	True	NA	NA	False	NA	NA	NA	70289945	70286891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289594_70289859
transcript_97104.nnic	chrX	-	1143	8	NNC	ENSG00000120509.11	novel	784	8	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	154.251186612708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	-23	True	AGTAAA	-18	NA	70289979	70286594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289622_70289859
transcript_97105.known	chrX	-	991	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	0	0	0	multi-exon	TRUE	canonical	3	286	junction_6	39.9781190152813	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	-7	True	NA	-23	True	AGTAAA	-18	NA	70289927	70286594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
transcript_97108.nic	chrX	-	1302	7	NIC	ENSG00000120509.11	novel	991	7	NA	NA	-54	0	intron_retention	FALSE	canonical	3	65	junction_6	115.560469980968	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	-23	True	AGTAAA	-18	NA	70289999	70286594	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289594_70289859
transcript_97111.known	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	23.5509848815052	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	-5	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_97117.known	chrX	+	2171	15	FSM	ENSG00000130055.14	ENST00000536730.5	2171	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	38.2115486336211	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70423383_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_9712.known	chr1	-	7256	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	36.7521390286796	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTCCTAAACATTCA	-7	True	NA	-41	True	AATAAA	-14	NA	220272453	220148292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_97120.known	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	36.4383243205549	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_97121.nnic	chrX	+	1963	13	NIC	ENSG00000130055.14	novel	1993	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	38.8182195195332	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	10	False	NA	32	True	AGTAAA	-17	NA	70423031	70433381	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_70423383_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_97125.known	chrX	+	5074	14	FSM	ENSG00000082458.12	ENST00000374355.7	5074	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	59.294072066679	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCAGCTTTGTCTTA	-15	True	NA	9	True	AATAAA	-21	NA	70452304	70505487	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70452756_70453636_70453794_70454213_70454317_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_97128.known	chrX	+	4529	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	27.9754910443687	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	-3	True	NA	7	True	AATAAA	-19	NA	70455095	70505485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_97159.known	chrX	-	2235	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_11	123.477103307951	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTGTGTCCTGT	NA	False	NA	-33	True	ATTAAA	-10	NA	70931125	70925587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
transcript_97160.known	chrX	-	2239	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_11	108.585419778301	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTTTTTTGCTT	-1	True	NA	-24	True	AATAAA	-1	NA	70931096	70925578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
transcript_972.nnic	chr1	-	1773	2	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	10	-5361	intron_retention	FALSE	canonical	3	64	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	24	True	NA	NA	False	AAAAAG	-20	NA	16644662	16635030	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_16635169_16643027
transcript_9720.known	chr1	-	1906	2	FSM	ENSG00000118873.17	ENST00000462353.1	1906	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAGTCTGGTCTTAC	7	True	NA	-18	True	AGTAAA	-15	NA	220272361	220265984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_220267752_220272222
transcript_97204.known	chrX	+	330	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-54	True	NA	NA	NA	70962963	70963293	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_70963000_70963300
transcript_97205.known	chrX	-	2286	4	FSM	ENSG00000147164.12	ENST00000374274.8	2286	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1.24721912892465	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTTTTCCTGCTTAA	13	True	NA	-25	True	ATTAAA	-15	NA	71068334	71059246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068141
transcript_97208.known	chrX	+	3644	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	10.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	2	True	NA	30	True	AATAAA	-30	NA	71095850	71103532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71096982_71100683_71101741_71102076
transcript_97209.nic	chrX	+	2819	3	NIC	ENSG00000184481.17	novel	306	2	NA	NA	-160	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	35.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	1445	False	NA	30	True	AATAAA	-30	NA	71099147	71103532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_71099454_71100683_71101741_71102076
transcript_97210.known	chrX	+	1603	2	FSM	ENSG00000169562.13	ENST00000647424.1	1603	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCAAGTTCTTTCTC	NA	False	NA	NA	False	ATTAAA	-35	NA	71215211	71225215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71215291_71223691
transcript_97211.known	chrX	+	1625	2	FSM	ENSG00000169562.13	ENST00000374029.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGGCTTGTGTGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	71215155	71225200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71215272_71223691
transcript_97214.known	chrX	+	1710	12	FSM	ENSG00000147140.17	ENST00000450092.6	1710	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	756.820666116589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	71	False	NA	NA	False	NA	NA	NA	71283760	71300076	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283989_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_97217.known	chrX	+	2606	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_1	640.065496648585	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	0	True	NA	32	True	ATTAAA	-21	NA	71283632	71301168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_9722.known	chr1	+	967	1	FSM	ENSG00000218283.2	ENST00000404582.2	967	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAGGCACTCTCACTC	68	False	NA	NA	False	NA	NA	NA	220253569	220254536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_220253600_220254500
transcript_97229.known	chrX	-	1841	7	FSM	ENSG00000147130.14	ENST00000373981.5	1841	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	47.9826357480843	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	702	False	NA	-3	True	AATAAA	-15	NA	71254575	71249203	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
transcript_9723.known	chr1	+	7287	7	FSM	ENSG00000186205.13	ENST00000366910.10	7287	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	13.5851225815432	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCCCAGCCAACATT	13	True	NA	8	True	AATAAA	-19	NA	220786912	220819659	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_220787220_220791490_220791665_220796642_220796806_220797873_220798015_220805051_220805114_220805202_220805275_220813291
transcript_97241.known	chrX	-	1867	7	FSM	ENSG00000147130.14	ENST00000373982.5	1867	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	55.9871016891887	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	13	True	NA	0	True	AATAAA	-18	NA	71254140	71249200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251251_71251557_71251602_71252588_71253275_71254028
transcript_97242.known	chrX	+	2868	13	FSM	ENSG00000147140.17	ENST00000677446.1	2868	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	722.764268278392	2449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	17	False	NA	32	True	ATTAAA	-21	NA	71254813	71301168	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71255001_71283614_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_97243.known	chrX	+	3206	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	0	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	254.547146909959	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	-23	True	NA	22	True	ATTAAA	-11	NA	71283609	71301158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
transcript_97244.known	chrX	+	2812	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	911.735615917977	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	373	False	NA	24	True	ATTAAA	-13	NA	71283589	71301160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_97245.known	chrX	+	3596	10	FSM	ENSG00000147140.17	ENST00000678323.1	3596	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	810.923616076823	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	-23	True	NA	22	True	ATTAAA	-11	NA	71283609	71301158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297360_71298509_71298706_71298817_71299941
transcript_97246.known	chrX	+	2655	12	FSM	ENSG00000147140.17	ENST00000678660.1	2655	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	755.964940811105	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	15	True	NA	24	True	ATTAAA	-13	NA	71283647	71301160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71290628_71290807_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_97247.known	chrX	+	987	3	FSM	ENSG00000147140.17	ENST00000678414.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1080.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATTAAATGATATAAATG	8	True	NA	NA	False	NA	NA	NA	71283640	71286213	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71283722_71284396_71284454_71285364
transcript_97248.known	chrX	+	5435	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	60.8444356656706	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	-2	True	NA	19	True	AATAAA	-19	NA	71533103	71575892	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_97250.known	chrX	+	3310	22	FSM	ENSG00000147162.14	ENST00000373701.7	3310	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	79.9932253367324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTATACCTGAGCCTCA	17	False	NA	6	True	AATAAA	-18	NA	71533122	71573816	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_97253.nnic	chrX	-	574	5	NNC	ENSG00000283178.1	novel	1552	5	NA	NA	1704	242	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	4.03112887414927	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTGTGGTCTGC	1885	False	NA	NA	False	AATAAA	-13	NA	71871591	71869520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_71869656_71869761_71869804_71870355_71870402_71870681_71870759_71871317
transcript_97256.nnic	chrX	+	909	4	NNC	ENSG00000102309.15	novel	1094	3	NA	NA	-246	191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	551.891293643957	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTATACATTTTGTT	NA	False	NA	12	True	AATAAA	-19	NA	72181106	72197545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_72181417_72186233_72186535_72196784_72196905_72197367
transcript_97257.known	chrX	+	1239	4	FSM	ENSG00000102309.15	ENST00000373669.8	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_1	148.236297849076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTGATTCTTAACAGA	7	True	NA	NA	False	AATAAA	-15	NA	72181756	72198340	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
transcript_97259.known	chrX	+	1780	3	FSM	ENSG00000102309.15	ENST00000218432.10	1780	3	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_1	94.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTATGTGATTCTTAAC	NA	False	NA	NA	False	AATAAA	-12	NA	72181675	72198337	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_72181829_72186460_72186535_72196784
transcript_9726.known	chr1	-	2589	4	FSM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	3.29983164553722	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGATGTGTCTTTTTTT	-3	True	NA	-16	True	TATAAA	-10	NA	221742089	221701423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_221702678_221706094_221706467_221738933_221739788_221741980
transcript_97261.nnic	chrX	+	393	3	NIC	ENSG00000102309.15	novel	1323	4	NA	NA	-23	191	combination_of_known_splicesites	FALSE	canonical	3	423	junction_1	412.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTATACATTTTGTT	-16	True	NA	12	True	AATAAA	-19	NA	72181733	72197545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_72181829_72196784_72196905_72197367
transcript_97262.known	chrX	-	4218	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCATCCACTTTGT	-31	True	NA	-14	True	ATTAAA	-15	NA	72239027	72204664	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72208699_72238843
transcript_97268.known	chrX	-	1474	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9708	junction_6	1404.93534845321	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGTCATGTCAGGC	7	True	NA	85	True	CATAAA	-21	NA	72277248	72272041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
transcript_97270.known	chrX	-	1865	12	FSM	ENSG00000147099.21	ENST00000648452.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.1458928305267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAATCTTTGAAAACC	-33	True	NA	-23	True	NA	NA	NA	72572865	72329537	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72330657_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97271.known	chrX	-	1807	12	FSM	ENSG00000147099.21	ENST00000647886.1	1807	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	69.4972500793739	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATCTTTGGTTTTTTT	-27	True	NA	-42	True	NA	NA	NA	72572859	72329556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97274.known	chrX	-	1754	11	FSM	ENSG00000147099.21	ENST00000373573.9	1754	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.634146831446	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	-11	True	NA	-1	True	AATAAA	-16	NA	72572843	72329515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97275.known	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	52.9914971050271	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	201	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97276.known	chrX	-	1516	10	FSM	ENSG00000147099.21	ENST00000647654.1	1516	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	68.3072217500454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATATATCTTTGGTTTTT	-11	True	NA	-44	True	NA	NA	NA	72572843	72329558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
transcript_97277.known	chrX	-	1625	10	FSM	ENSG00000147099.21	ENST00000373568.7	1625	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	57.4619573562359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGATTCCATCTCTACA	-10	True	NA	NA	False	NA	NA	NA	72572842	72351299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97278.known	chrX	-	1909	10	FSM	ENSG00000147099.21	ENST00000478743.2	1909	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.6423377319788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAATACATAAAAATTAT	-15	True	NA	NA	False	ATTAAA	-3	NA	72572847	72421654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72422476_72462003_72462096_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97279.known	chrX	-	1695	9	FSM	ENSG00000147099.21	ENST00000373589.9	1695	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	61.9430181699278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATATCTTTGGTTTT	NA	False	NA	-45	True	NA	NA	NA	72573101	72329559	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
transcript_97283.known	chrX	-	5689	9	FSM	ENSG00000147099.21	ENST00000648298.1	5689	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.6836056937951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTCATGTCTTTTATT	-11	True	NA	NA	False	AATAAA	-19	NA	72572843	72457401	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97285.known	chrX	-	2373	8	FSM	ENSG00000147099.21	ENST00000439122.7	2373	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.9475629392477	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCATCATTATTAT	NA	False	NA	-1	True	AATAAA	-18	NA	72573083	72473415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72474730_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97287.known	chrX	-	1026	5	FSM	ENSG00000147099.21	ENST00000648459.1	1026	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.1009554043227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATATATCTTTGGTTTTT	5056	False	NA	-44	True	NA	NA	NA	72568022	72329558	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72567888
transcript_97288.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000650636.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82.0041919660209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCGTATAATGACTT	16	True	NA	0	True	TATAAA	-17	NA	72572816	72562219	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72562475_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_9729.nnic	chr1	-	2025	13	NNC	ENSG00000143498.18	novel	1966	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	37.0540146272978	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-20	True	NA	NA	False	NA	NA	NA	222589940	222557901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_222558269_222558622_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222566473_222566526_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_97290.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	71.2916544905503	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	-24	True	NA	1	True	AATAAA	-21	NA	72572856	72567581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97291.known	chrX	-	836	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	12.7104506432917	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	-21	True	NA	1	True	AATAAA	-21	NA	72572853	72567581	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97292.known	chrX	-	1274	10	FSM	ENSG00000147099.21	ENST00000415409.6	1274	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	69.9393034912381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGGAAAAGAATGTAAAG	-11	True	NA	NA	False	AATAAA	-10	NA	72572843	72385108	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72385296_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_97293.known	chrX	-	6121	31	FSM	ENSG00000067177.15	ENST00000339490.7	6121	31	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_18	7.47261667690776	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTTTTTGTGATTGG	124	False	NA	-2	True	ATTAAA	-30	NA	72714181	72578814	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
transcript_97295.known	chrX	+	1524	6	FSM	ENSG00000184911.15	ENST00000472595.5	1524	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49666295470958	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATATACGGGTTGTTT	121	False	NA	NA	False	AATAAA	-20	NA	72777008	72848802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_72777249_72845041_72845200_72845498_72845558_72845871_72846006_72846884_72847278_72848262
transcript_97296.known	chrX	+	1490	1	FSM	ENSG00000269911.1	ENST00000602508.1	1490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCATCGACTCATTT	720	False	NA	NA	False	AATAAA	-19	NA	72777607	72779097	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_72777600_72779100
transcript_97297.known	chrX	-	2044	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGCCTTCTCATTGAG	0	True	NA	-9	True	AATAAA	-17	NA	73128080	73126036	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_73126000_73128100
transcript_97298.known	chrX	-	2553	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTATTTCTTGTTAT	-12	True	NA	2	True	AATAAA	-36	NA	73214851	73212298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_73212300_73214900
transcript_97299.known	chrX	+	1642	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	-5	True	NA	3	True	AATAAA	-22	NA	73447052	73455171	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73447756_73453516_73453663_73454378
transcript_973.known	chr1	-	164	1	FSM	ENSG00000207513.1	ENST00000384782.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	16666948	16666784	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16666800_16666900
transcript_9730.known	chr1	-	1966	12	FSM	ENSG00000143498.18	ENST00000350027.8	1966	12	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_1	27.8627094610771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	222589933	222557901	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_222558269_222558622_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_97300.known	chrX	-	1877	6	FSM	ENSG00000230590.12	ENST00000687056.1	3054	6	3	1174	-1	3	multi-exon	FALSE	canonical	3	17	junction_1	19.1582880237249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTATTTTCCCCCATCCC	3	True	NA	NA	False	AATAAA	-23	NA	74292589	74202667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74203910_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
transcript_97304.known	chrX	-	1627	6	FSM	ENSG00000230590.12	ENST00000656977.1	1627	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.1413640049569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGTCTTTTTGTGAG	-7	True	NA	NA	False	NA	NA	NA	74293503	74246421	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74247425_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74293351
transcript_97305.known	chrX	-	1477	6	FSM	ENSG00000230590.12	ENST00000671067.1	1477	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_5	23.0564524591274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCCATTCTGTATAC	1170	False	NA	NA	False	NA	NA	NA	74292378	74247128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74247924_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292168
transcript_97306.known	chrX	-	3400	6	FSM	ENSG00000230590.12	ENST00000656041.1	3400	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	20.4509168498627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGTAAGATGCAACTTC	1032	False	NA	NA	False	AATAAA	-20	NA	74292516	74245085	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74247924_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
transcript_97307.known	chrX	-	2519	4	FSM	ENSG00000230590.12	ENST00000668224.1	2519	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	24.8506650928211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAGGCTGAGGCAGGA	-12	True	NA	NA	False	AATACA	-42	NA	74292373	74278482	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292168
transcript_97308.known	chrX	-	2778	4	FSM	ENSG00000230590.12	ENST00000429124.6	2778	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	18.8325958557674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAAAGGTTCCCAATG	928	False	NA	NA	False	ATTAAA	-19	NA	74292620	74278212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292426
transcript_97309.known	chrX	-	2838	4	FSM	ENSG00000230590.12	ENST00000662864.1	2838	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	14.7196014438797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATCATCTCAAAATCAC	-26	True	NA	NA	False	NA	NA	NA	74293574	74278181	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74293351
transcript_9731.nnic	chr1	-	1969	12	NNC	ENSG00000143498.18	novel	1910	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	34.6095099910152	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-20	True	NA	-4	True	AATAAA	-24	NA	222589940	222558311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222566473_222566526_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_97310.nnic	chrX	+	543	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-25	92	0	-92	intron_retention	FALSE	canonical	3	257	junction_2	134.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTGTTTGTTTGAA	-3	True	NA	12	True	CATAAA	-20	NA	73944341	73947338	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_97323.known	chrX	+	1818	6	FSM	ENSG00000225470.8	ENST00000663027.1	1818	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	185.513773073591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAATTTATACATTA	-6	True	NA	NA	False	AAAAAG	-40	NA	73944338	73999990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953
transcript_97324.known	chrX	+	1292	6	FSM	ENSG00000225470.8	ENST00000660546.1	1292	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	183.54726911616	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTTGTTCTGGGCAA	322	False	NA	1	True	AATATA	-13	NA	73944235	74004677	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_74004269
transcript_97326.known	chrX	+	1726	6	FSM	ENSG00000225470.8	ENST00000667057.1	1726	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	196.598677513355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATAGTCTCTTCTTACA	-4	True	NA	NA	False	AATAAA	-28	NA	73944340	74000205	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73962730_73962802_73994839_73994962_73998767_73998845_73998953
transcript_97329.known	chrX	+	2067	6	FSM	ENSG00000225470.8	ENST00000659254.1	2067	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	194.939375191366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATAAAACTCGCTG	-6	True	NA	7	True	AGTAAA	-26	NA	73944316	74000495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73984443_73984542_73994839_73994962_73998767_73998845_73998953
transcript_97330.known	chrX	+	864	6	FSM	ENSG00000225470.8	ENST00000667294.1	864	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	193.895848331005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACTGTAAAACTACTA	-3	True	NA	-43	True	ATTAAA	-17	NA	73944341	74004633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73984443_73984542_73994839_73994962_73998767_73998845_74004269
transcript_97334.known	chrX	+	5352	6	FSM	ENSG00000225470.8	ENST00000660856.1	5352	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	167.29542731348	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTGCAGCCTGGGCG	-1	True	NA	NA	False	NA	NA	NA	73944321	74007656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73998953_74000497_74004269
transcript_9734.known	chr1	-	1910	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	19.29144888286	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-13	True	NA	-4	True	AATAAA	-24	NA	222589933	222558311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_97341.known	chrX	+	633	5	FSM	ENSG00000225470.8	ENST00000602985.6	633	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	217.792332280087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATCTATATGTGAAATT	-6	True	NA	12	True	AATAAA	-25	NA	73944338	74004548	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73962730_73962802_73998767_73998845_74004269
transcript_97343.known	chrX	+	1746	5	FSM	ENSG00000225470.8	ENST00000671336.1	1746	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	216.396626591082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCCATCCAGGAATACT	-4	True	NA	NA	False	AAAAAG	-13	NA	73944340	74000320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73984443_73984542_73998767_73998845_73998953
transcript_97345.nic	chrX	+	1445	5	ISM	ENSG00000225470.8	ENST00000670506.1	2112	7	-21	4595	-15	0	intron_retention	FALSE	canonical	3	73	junction_4	181.589337517377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAAGATAGTTTAAGAG	382	False	NA	NA	False	AAAAAG	-7	NA	73944295	73999950	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73998953
transcript_97348.known	chrX	+	3950	5	FSM	ENSG00000225470.8	ENST00000655090.1	3950	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	178.49562319564	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCGACAAAGACTGTCAAAA	283	False	NA	NA	False	NA	NA	NA	73944196	74007672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_74004269
transcript_9735.nic	chr1	-	1935	11	NIC	ENSG00000143498.18	novel	1910	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	27.0584552404604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-20	True	NA	-4	True	AATAAA	-24	NA	222589940	222558311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579891_222584127_222584298_222588442_222588566_222589726
transcript_97352.known	chrX	+	5113	5	FSM	ENSG00000225470.8	ENST00000657179.1	5113	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	193.980024744817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	-6	True	NA	NA	False	NA	NA	NA	73944316	74007534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_73998953_74000497_74004269
transcript_97353.known	chrX	+	3758	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	181.267757750793	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	73944323	74007684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
transcript_97358.known	chrX	+	3571	4	FSM	ENSG00000225470.8	ENST00000660840.1	3571	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	214.991989514855	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	397	False	NA	NA	False	NA	NA	NA	73944310	74007529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_74004269
transcript_97359.known	chrX	+	4628	4	FSM	ENSG00000225470.8	ENST00000668590.1	4628	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	222.832273744676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	1	True	NA	NA	False	NA	NA	NA	73944323	74007534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73999354_74000497_74004269
transcript_97364.nic	chrX	+	955	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-71	-274	-15	0	intron_retention	FALSE	canonical	3	257	junction_2	134.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	382	False	NA	NA	False	AATAAA	-16	NA	73944295	73947704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_97366.known	chrX	+	3463	3	FSM	ENSG00000225470.8	ENST00000669149.1	3463	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	250	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	-3	True	NA	NA	False	NA	NA	NA	73944341	74007529	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_74004269
transcript_97367.known	chrX	+	882	3	FSM	ENSG00000225470.8	ENST00000666493.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	121.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	-5	True	NA	NA	False	AATAAA	-16	NA	73944317	73947704	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944415_73944583_73944663_73946998
transcript_97368.known	chrX	+	782	5	FSM	ENSG00000225470.8	ENST00000602294.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.296965224645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATGATGTTGTTCTGG	-3	True	NA	-3	True	AATATA	-9	NA	73944341	74004673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994863_73994962_73998767_73998845_74004269
transcript_97369.known	chrX	+	483	2	FSM	ENSG00000225470.8	ENST00000453317.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTCTTGAAGCATCT	1	True	NA	NA	False	NA	NA	NA	73944345	73944946	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583
transcript_97370.known	chrX	+	1492	4	FSM	ENSG00000225470.8	ENST00000662120.1	1492	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	217.642418251182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATAAAACTCGCTGA	-6	True	NA	8	True	AGTAAA	-27	NA	73944316	74000496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73999354
transcript_97371.known	chrX	+	853	4	FSM	ENSG00000225470.8	ENST00000660087.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	214.757227274582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTATATCTATATGT	-4	True	NA	6	True	AATAAA	-19	NA	73944340	74004542	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_74004269
transcript_97372.known	chrX	-	3478	5	FSM	ENSG00000131263.13	ENST00000349225.2	3478	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	46.0814496299758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTTGAGATTTGTCA	13	True	NA	NA	False	NA	NA	NA	74614617	74590117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
transcript_97374.known	chrX	-	10565	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	26.6207938774685	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	6	True	NA	NA	False	TATAAA	-15	NA	74614624	74582975	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
transcript_97376.known	chrX	-	2361	17	FSM	ENSG00000131269.19	ENST00000645829.3	2361	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	83.0782528327961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACATTCCCATTTTCTA	1	True	NA	-22	True	ATTAAA	-5	NA	75156282	75053292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114620_75114633_75114753_75114835_75156104
transcript_97378.known	chrX	-	4592	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_15	38.1216765400241	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	0	True	NA	-7	True	AATAAA	-20	NA	75156283	75051047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_97379.known	chrX	-	4595	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_15	40.7899769823694	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	0	True	NA	-7	True	AATAAA	-20	NA	75156283	75051047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
transcript_9738.nic	chr1	-	1747	10	ISM	ENSG00000143498.18	ENST00000366890.5	1648	11	-155	410	-7	0	5prime_fragment	FALSE	canonical	1	1	junction_8	30.4338992280355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-20	True	NA	-4	True	AATAAA	-24	NA	222589940	222558311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222588442_222588566_222589726
transcript_97383.known	chrX	-	2234	15	FSM	ENSG00000131269.19	ENST00000339447.8	2234	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.416959640381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTATAATCCTTCTT	4	True	NA	-11	True	ATTAAA	-16	NA	75156279	75053281	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114832_75156104
transcript_97384.known	chrX	-	2142	15	FSM	ENSG00000131269.19	ENST00000620875.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	70.8075863570725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACATAAGACATTTTCTT	11	False	NA	-33	True	AAGAAA	-42	NA	75156272	75053369	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114835_75156104
transcript_9739.nic	chr1	-	1803	10	NIC	ENSG00000143498.18	novel	1910	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	22.6175939382498	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-20	True	NA	-4	True	AATAAA	-24	NA	222589940	222558311	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222584127_222584298_222588442_222588566_222589726
transcript_97394.nnic	chrX	+	1840	9	NNC	ENSG00000094841.14	novel	730	8	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	76.8064735227442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	477	False	NA	-16	True	NA	NA	NA	75274683	75304572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_75274759_75285422_75285525_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_97395.known	chrX	+	1135	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	58.0197010875247	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAATAATTATCTTATG	17	True	NA	NA	False	NA	NA	NA	75274115	75303519	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_97398.nic	chrX	+	1755	8	NIC	ENSG00000094841.14	novel	1636	7	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	69.2425491460626	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	460	False	NA	-16	True	NA	NA	NA	75274666	75304572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_75274759_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_974.known	chr1	+	164	1	FSM	ENSG00000207389.1	ENST00000384659.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	16740515	16740679	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16740500_16740700
transcript_97400.known	chrX	+	2474	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_2	21.3124898175277	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	-14	True	NA	NA	False	AATAAA	-32	NA	75274084	75304885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_97401.known	chrX	+	2234	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	57.5065213693195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	-9	True	NA	12	True	ATTAAA	-15	NA	75274089	75304600	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_97403.known	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	55.9483889153407	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	521	False	NA	-16	True	NA	NA	NA	75274727	75304572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_97409.known	chrX	-	5578	12	FSM	ENSG00000102383.14	ENST00000373367.8	5578	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.5344770449971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTTTTTTCCTAA	-7	True	NA	0	True	ATTAAA	-16	NA	75523037	75368426	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75505820_75505848_75522888
transcript_97410.known	chrX	-	6012	11	FSM	ENSG00000102383.14	ENST00000541184.1	6012	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	9.50578771065291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTGTTGGTTTTTTTTC	59	False	NA	-4	True	ATTAAA	-12	NA	75523502	75368430	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75522888
transcript_97414.nic	chrX	-	1281	4	ISM	ENSG00000102383.14	ENST00000373367.8	5578	12	-408	81894	57	51171	5prime_fragment	FALSE	canonical	3	39	junction_2	5.31245915016974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTCTGTCATGCCTCA	116	False	NA	NA	False	AATAAA	-16	NA	75523445	75450320	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_75450923_75478890_75478986_75505820_75505848_75522888
transcript_97416.nnic	chrX	-	1704	3	NIC	ENSG00000102383.14	novel	899	2	NA	NA	-214	537	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	18	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCTTTGTGTCAGATT	8	True	NA	NA	False	AATAAA	-20	NA	75523251	75500954	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_75502269_75505820_75505848_75522888
transcript_97417.nnic	chrX	-	641	3	NIC	ENSG00000102383.14	novel	899	2	NA	NA	176	-601	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGTCTGTGTTACTTT	235	False	NA	-5	True	AATAAA	-16	NA	75523326	75502092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_75502269_75505820_75505848_75522888
transcript_97418.known	chrX	+	1185	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_5	25.8487910742456	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCCTGTAGTGAA	13	True	NA	137	True	NA	NA	NA	76173061	76178314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
transcript_97421.nnic	chrX	+	1613	6	NNC	ENSG00000102390.11	novel	1185	6	NA	NA	-191	288	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_5	206.934772331766	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGGAAAACCAGACAGA	NA	False	NA	NA	False	NA	NA	NA	76172848	76178602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177688
transcript_97424.known	chrX	+	977	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	226.934461904753	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	-9	True	NA	19	True	AATAAA	-16	NA	76173039	76178196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
transcript_9743.known	chr1	+	1503	2	FSM	ENSG00000225265.2	ENST00000668515.1	1503	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGTCCTTTGTGCT	204	False	NA	NA	False	AATAAA	-34	NA	222590178	222593439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222590408_222592165
transcript_97436.known	chrX	+	3633	1	FSM	ENSG00000198934.5	ENST00000361470.4	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCTAATACACTGAC	-3	True	NA	NA	False	AATAAA	-17	NA	76427709	76431342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_76427700_76431300
transcript_97440.known	chrX	-	3071	10	FSM	ENSG00000085224.23	ENST00000624032.3	3071	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	22.2316646605747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAAGGGAACTGAAG	6	True	NA	95	True	GATAAA	-6	NA	77786208	77682304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77683452_77683538_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_9745.known	chr1	+	8126	28	FSM	ENSG00000154305.18	ENST00000344922.10	8126	28	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	38.6134513901294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCAATTTAAGCTTC	2	True	NA	14	True	ATTAAA	-16	NA	222618096	222668007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_97451.nic	chrX	-	3345	9	NIC	ENSG00000085224.23	novel	3071	10	NA	NA	-2	180	intron_retention	FALSE	canonical	3	16	junction_3	20.8262904762226	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGTAAAAAAATAAGAG	-4	True	NA	NA	False	CATAAA	-34	NA	77786218	77682124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_77684594_77684938_77685007_77688817_77688925_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97453.nic	chrX	-	3346	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	177245	0	180	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGTAAAAAAATAAGAG	-2	True	NA	NA	False	CATAAA	-34	NA	77786216	77682124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97458.nic	chrX	-	2842	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-53	177802	-36	-377	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGGATAATCAAGGGCA	NA	False	NA	4	True	AATACA	-43	NA	77786269	77682681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_9746.known	chr1	+	2735	23	FSM	ENSG00000154305.18	ENST00000340535.11	2735	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	50.5591871469338	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCTTACAACTTTGAA	-27	True	NA	22	True	AATAAA	-19	NA	222644302	222665823	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222644587_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_97461.nic	chrX	-	2730	9	NIC	ENSG00000085224.23	novel	11165	35	NA	NA	0	-433	intron_retention	FALSE	canonical	3	16	junction_3	20.8262904762226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTCCAAATACAAAAGAT	-2	True	NA	-52	True	AGTAAA	-29	NA	77786216	77682737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_77684594_77684938_77685007_77688817_77688925_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97462.nic	chrX	-	2733	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	177858	0	-433	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTCCAAATACAAAAGAT	-2	True	NA	-52	True	AGTAAA	-29	NA	77786216	77682737	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97463.nic	chrX	-	2546	9	NIC	ENSG00000085224.23	novel	3071	10	NA	NA	1	586	intron_retention	FALSE	canonical	3	16	junction_3	20.8262904762226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACGAAAAAGTTCTACA	-1	True	NA	NA	False	GATAAA	-8	NA	77786215	77682920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_77684594_77684938_77685007_77688817_77688925_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97465.nic	chrX	-	2603	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-53	178041	-36	586	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACGAAAAAGTTCTACA	NA	False	NA	NA	False	GATAAA	-8	NA	77786269	77682920	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97466.nic	chrX	-	1487	9	NIC	ENSG00000085224.23	novel	11165	35	NA	NA	0	-474	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	20.8262904762226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAATACCAAAGAGCA	-2	True	NA	NA	False	NA	NA	NA	77786216	77683980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_77684594_77684938_77685007_77688817_77688925_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97468.nic	chrX	-	1489	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-7	1676	1	-474	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAATACCAAAGAGCA	-1	True	NA	NA	False	NA	NA	NA	77786215	77683980	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97470.nic	chrX	-	1098	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-10	2070	-2	103	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAGAAGATAAAAGTTG	-4	True	NA	NA	False	NA	NA	NA	77786218	77684374	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97476.known	chrX	-	1860	8	FSM	ENSG00000085224.23	ENST00000623321.3	1860	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	25.0867881319134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTATATGTTAAACT	-11	True	NA	NA	False	ATTAAA	-25	NA	77786225	77683506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77785981
transcript_97480.nic	chrX	-	2677	8	ISM	ENSG00000085224.23	ENST00000395603.7	10218	34	-2	176969	-2	-377	5prime_fragment	FALSE	canonical	3	15	junction_3	21.9079707794553	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGGATAATCAAGGGCA	-4	True	NA	4	True	AATACA	-43	NA	77786218	77682681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97495.known	chrX	-	11165	35	FSM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_29	139.750605844519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	-2	True	NA	NA	False	AATAAA	-18	NA	77786216	77504879	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_97496.nnic	chrX	-	2876	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	0	True	NA	0	True	AATAAA	-16	NA	77895476	77826363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77827497_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_97497.nnic	chrX	-	3354	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	0	True	NA	0	True	AATAAA	-16	NA	77895476	77826363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828033_77828608_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_97498.nnic	chrX	-	3416	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	0	True	NA	0	True	AATAAA	-16	NA	77895476	77826363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828037_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_975.known	chr1	+	475	2	FSM	ENSG00000228549.5	ENST00000457856.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGATTGAGAGTTGCTTG	NA	False	NA	NA	False	AATAAA	-33	NA	16873038	16874092	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16873144_16873722
transcript_97501.nnic	chrX	-	2274	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-28	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGAAAAGGACTCCC	0	True	NA	NA	False	AAAAAG	-1	NA	77895476	77827443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828033_77828608_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_97502.nnic	chrX	-	2318	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-28	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAAGTA	0	True	NA	NA	False	NA	NA	NA	77895476	77827461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_77828037_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_97505.known	chrX	-	4047	10	FSM	ENSG00000102158.22	ENST00000358075.11	4047	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	12.9099444873581	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	0	True	AATAAA	-16	NA	77895593	77826363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_9751.nic	chr1	+	1264	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-16	17679	-14	-17679	5prime_fragment	FALSE	canonical	3	148	junction_1	5.55777733351102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGATGATGATGCATT	-12	True	NA	NA	False	AAGAAA	-3	NA	222618082	222628456	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_97512.known	chrX	-	962	4	FSM	ENSG00000102158.22	ENST00000373336.3	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	105.135890901041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCCTCATCTTATGTT	-2	True	NA	NA	False	ATTAAA	-22	NA	77895440	77868107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_77868650_77870807_77870926_77875427_77875598_77895308
transcript_97515.known	chrX	+	605	4	FSM	ENSG00000131174.7	ENST00000373335.4	605	4	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	2165.92074339452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	77899439	77905385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_77899594_77901743_77901868_77902642_77902768_77905183
transcript_97516.known	chrX	+	505	3	FSM	ENSG00000131174.7	ENST00000647835.1	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	2245	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGCTTCTTAAATAGG	-1	True	NA	90	True	ATTAAA	-10	NA	77899484	77905461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_77899594_77902649_77902768_77905183
transcript_97517.known	chrX	+	8492	23	FSM	ENSG00000165240.22	ENST00000341514.11	8492	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	4.25261222589148	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTCTGTCTCTTTTGT	-27	True	NA	7	True	NA	NA	NA	77910692	78050395	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_77910836_77971620_77971762_77988241_77988732_77989232_77989959_77998477_77998685_78003072_78003237_78009101_78009264_78011175_78011253_78011448_78011675_78012878_78013113_78014661_78014754_78015753_78015882_78020243_78020399_78020944_78021080_78029249_78029445_78031399_78031583_78033604_78033822_78038835_78038983_78040590_78040734_78042584_78042789_78043316_78043435_78045469_78045573_78046293
transcript_9752.known	chr1	+	4104	13	FSM	ENSG00000162819.12	ENST00000340934.10	4104	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	6.99354861441759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	5	True	NA	17	True	AATAAA	-18	NA	222712563	222735187	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
transcript_97525.known	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	2846	junction_8	160.155049873552	3572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	0	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
transcript_9754.known	chr1	-	2975	10	FSM	ENSG00000186063.13	ENST00000340020.11	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_5	42.2847490237319	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-12	True	NA	0	True	ATTAAA	-16	NA	222712491	222668012	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222712207
transcript_97540.known	chrX	+	2363	2	FSM	ENSG00000248503.3	ENST00000686088.1	3827	2	59	1405	2	1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	21	True	NA	NA	False	AATAAA	-17	NA	77910740	77964890	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_77910836_77962622
transcript_97541.known	chrX	-	2657	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	58.8607112880343	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTTCATTTTTTAG	-14	True	NA	-21	True	AATAAA	-13	NA	78139650	78129747	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
transcript_97542.known	chrX	-	734	6	FSM	ENSG00000187325.5	ENST00000480681.1	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	62.4819974072532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAATATTCTTATTAC	14	True	NA	NA	False	NA	NA	NA	78139622	78131720	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78138099_78138842_78138925_78139560
transcript_97547.known	chrX	+	553	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	14	3887	3	-179	multi-exon	FALSE	canonical	2	6	junction_2	9.22970747098737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACCCCTGCAGCCAGC	4	True	NA	NA	False	NA	NA	NA	78747733	78754827	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
transcript_97549.known	chrX	+	672	4	FSM	ENSG00000147145.14	ENST00000514744.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.0184900284226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGTATTCATCTTGG	1	True	NA	NA	False	NA	NA	NA	78747730	78755006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_78748035_78750173_78750224_78751209_78751312_78754790
transcript_97552.nic	chrX	+	1364	3	ISM	ENSG00000147145.14	ENST00000614823.5	4454	5	-948	7934	-937	-514	5prime_fragment	TRUE	canonical	2	6	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACCCAATGTAAGTTC	NA	False	NA	NA	False	AAAAAG	-7	NA	78746771	78750780	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_78748035_78750173_78750224_78750729
transcript_97562.known	chrX	+	2611	2	FSM	ENSG00000147145.14	ENST00000435339.3	2611	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAAACTAAACCAAACC	-2	True	NA	NA	False	AATAAA	-13	NA	78747727	78757094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_78748035_78754790
transcript_97564.nic	chrX	-	1611	7	NIC	ENSG00000078596.11	novel	1616	6	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	103.449934214038	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	NA	False	NA	-4	True	AATAAA	-16	NA	79367602	79360383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104_79367274_79367546
transcript_97567.known	chrX	-	1616	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	13.5292276202302	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	10	True	NA	-4	True	AATAAA	-16	NA	79367334	79360383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
transcript_97569.known	chrX	-	1698	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	102.655978880921	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCACTGTTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	79367552	79360387	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
transcript_97573.nnic	chrX	-	2850	6	NIC	ENSG00000278530.5	novel	597	8	NA	NA	0	2094	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	7.12741187248218	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACTTACTTAAATGTAC	-17	True	NA	NA	False	AATAAA	-18	NA	80335364	80269970	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_80272110_80288905_80289058_80289663_80289772_80290877_80291025_80310078_80310234_80335215
transcript_97574.nnic	chrX	-	2703	5	NIC	ENSG00000278530.5	novel	597	8	NA	NA	0	2099	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_4	5.24404424085076	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTTAAATGTACATGAT	-17	True	NA	NA	False	AATAAA	-23	NA	80335364	80269965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_80272110_80289663_80289772_80290877_80291025_80310078_80310234_80335215
transcript_97576.known	chrX	-	572	5	FSM	ENSG00000198157.11	ENST00000373250.7	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	133.346119178625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAGATGGAAAAAA	-4	True	NA	-7	True	GATAAA	-31	NA	81121638	81114984	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81121534
transcript_97578.known	chrX	-	742	4	FSM	ENSG00000198157.11	ENST00000447319.5	742	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_3	159.858270560727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGGAAAGATGTAAAAGT	34	False	NA	15	True	GATAAA	-4	NA	81121688	81114834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81121534
transcript_97579.known	chrX	-	578	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	20.5951450589696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGAAAAAGGGGAAGA	39	False	NA	-76	True	NA	NA	NA	81121683	81115053	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
transcript_97580.known	chrX	+	928	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	290.359583103434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTCTCTCATTCCTA	7	True	NA	16	True	ATTAAA	-16	NA	81202127	81297597	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
transcript_97581.known	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	20.4613456709637	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	-19	True	NA	27	True	AATAAA	-23	NA	81202101	81298547	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
transcript_97582.known	chrX	-	8465	22	FSM	ENSG00000072133.11	ENST00000262752.5	8465	22	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_5	9.79957887012223	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACCGTTGACCTCGCT	-21	True	NA	-11	True	AATAAA	-21	NA	84188199	84058349	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84187818
transcript_97586.known	chrX	-	6305	11	FSM	ENSG00000165259.14	ENST00000373177.3	6305	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	13.4762754498415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	6	True	NA	NA	False	AATAAA	-15	NA	84502453	84317877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84488023_84488133_84502341
transcript_97587.known	chrX	-	6200	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7.56372107783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTTCTTTATTTTAA	6	True	NA	NA	False	AATAAA	-19	NA	84502453	84317873	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
transcript_97592.known	chrX	-	475	3	FSM	ENSG00000165259.14	ENST00000465509.3	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTCTCTTTGGTGAC	6	True	NA	NA	False	AATAAA	-17	NA	84502453	84500024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_84500305_84501428_84501512_84502341
transcript_97593.nnic	chrX	-	1039	3	NNC	ENSG00000184788.14	novel	2821	8	NA	NA	-14	17552	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	10	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAATGATTTAAATAT	NA	False	NA	NA	False	AATAAA	-16	NA	85243884	85191223	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_85191844_85224204_85224327_85243587
transcript_97594.known	chrX	+	6480	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	5.1234753829798	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	-9	True	NA	12	True	AATAAA	-18	NA	85003876	85093315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
transcript_97596.known	chrX	+	4124	9	FSM	ENSG00000147180.17	ENST00000373165.7	4124	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	32.714436797842	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTTTATAAGTTTATT	41	False	NA	16	True	AATAAA	-18	NA	85244031	85273360	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
transcript_97597.known	chrX	-	5438	15	FSM	ENSG00000188419.14	ENST00000357749.7	5438	15	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	10.1672242514657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCATATTTTGT	-12	True	NA	-1	True	AATAAA	-20	NA	86047558	85861179	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_85864822_85873051_85873213_85878964_85879064_85894187_85894285_85900645_85900710_85901083_85901189_85911260_85911339_85956152_85956379_85957854_85957976_85958860_85958978_85963664_85964053_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_976.known	chr1	-	527	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	4	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	166	False	NA	-5	True	AATAAA	-27	NA	16889501	16888541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16888783_16889215
transcript_97603.known	chrX	-	2821	5	FSM	ENSG00000188419.14	ENST00000615443.1	2821	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	25.2326673183792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTGATTTATTTTGAA	7	True	NA	NA	False	AATAAA	-27	NA	86047539	85969086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_85971587_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_97605.known	chrX	+	2417	12	FSM	ENSG00000126733.22	ENST00000373125.9	2417	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	4.79496981608749	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTCACTGAGTATTT	-8	True	NA	2	True	AATAAA	-16	NA	86148450	86832602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_86149109_86376823_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813005_86813129_86813278_86814687_86814835_86816033_86816100_86832105
transcript_97609.known	chrX	+	5765	11	FSM	ENSG00000102271.14	ENST00000373119.9	5765	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	16.636105313444	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTGACAATGCTTG	4	True	NA	NA	False	AATAAA	-15	NA	87517801	87670050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
transcript_97610.nnic	chrX	+	3563	10	NIC	ENSG00000102271.14	novel	5765	11	NA	NA	-87	-1663	combination_of_known_splicesites	FALSE	canonical	3	9	junction_9	37.3128250549358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGTGTGGCTTTAGAAT	2	True	NA	5	True	AATAAA	-16	NA	87517714	87667933	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87666474
transcript_97612.known	chrX	+	3206	2	FSM	ENSG00000174740.8	ENST00000312600.4	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTGACTGCATAGTAT	0	True	NA	NA	False	AATAAA	-19	NA	91434838	91438584	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_91434895_91435434
transcript_97614.known	chrX	+	9022	11	FSM	ENSG00000102290.23	ENST00000682573.1	9022	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.201373574541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTGTTATTGTGTGT	0	True	NA	NA	False	AATAAA	-17	NA	91779374	92623230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_92201374_92201456_92263113_92263144_92387734_92387934_92468298_92468323_92618263
transcript_97616.known	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	12.7216351150314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_9762.known	chr1	+	782	2	FSM	ENSG00000162819.12	ENST00000496267.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTAGGCATTTCATA	0	True	NA	107	True	AATAAA	-17	NA	222712558	222713985	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222712943_222713587
transcript_97631.nnic	chrX	+	798	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	321.600124378085	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310578	97469835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97346805_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_97637.nnic	chrX	+	847	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625748	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	340.208406715648	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310589	97469835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97315689_97315894_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_97639.nnic	chrX	+	696	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625695	0	at_least_one_novel_splicesite	FALSE	canonical	3	461	junction_1	128.937969582276	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310536	97469835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_97640.nnic	chrX	+	992	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625695	-5307	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	273.278246481494	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAAAAGAATAGAAA	NA	False	NA	NA	False	TTTAAA	-38	NA	97310536	97599690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97599252
transcript_97641.nnic	chrX	+	1846	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625749	-4399	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	273.278246481494	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAACTTGTCTGTCTAT	NA	False	NA	10	True	AATAAA	-18	NA	97310590	97600598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97599252
transcript_97643.nnic	chrX	+	617	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	281.732475053906	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310578	97469835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_97647.nnic	chrX	+	487	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625704	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	318.814470604248	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310545	97469835	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
transcript_97649.nnic	chrX	+	1691	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625704	-4399	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_3	344.315101163003	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAACTTGTCTGTCTAT	NA	False	NA	10	True	AATAAA	-18	NA	97310545	97600598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97599252
transcript_97656.nnic	chrX	+	1535	3	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625724	-4399	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	28.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAACTTGTCTGTCTAT	NA	False	NA	10	True	AATAAA	-18	NA	97310565	97600598	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_97310659_97429649_97429746_97599252
transcript_97667.known	chrX	+	1309	6	FSM	ENSG00000281566.3	ENST00000626665.3	1309	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.0466213843026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	20	False	NA	32	True	AATAAA	-29	NA	98573858	98865564	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98785026_98785125_98864610
transcript_9767.nic	chr1	+	775	5	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	12	junction_2	32.7184962979658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-17	True	NA	17	True	AATAAA	-17	NA	222815025	222837384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815079_222823883_222823946_222827427_222827602_222835118_222835216_222836995
transcript_97671.nnic	chrX	+	3345	5	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-5	2145	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	17.5267652463311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAAGTGCATTATTTGT	-3	True	NA	9	True	AATAAA	-19	NA	98573869	98867709	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98864610
transcript_97678.nnic	chrX	+	791	3	NNC	ENSG00000281566.3	novel	625	4	NA	NA	5	-45458	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	23.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATAATTCGCATTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	98573814	98599768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_98573933_98578985_98579075_98599184
transcript_97679.nic	chrX	+	970	3	ISM	ENSG00000281566.3	ENST00000627700.2	625	4	-111	219802	-46	13	5prime_fragment	FALSE	canonical	3	49	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGCAATTGTCACCT	NA	False	NA	NA	False	NA	NA	NA	98573763	98645239	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_98573933_98578985_98579075_98644527
transcript_97680.nic	chrX	+	1242	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8659	0	-29	0	3prime_fragment	FALSE	canonical	3	8	junction_3	3.60555127546399	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGATTGCTGCTGAAC	235	False	NA	6	True	AATAAA	-19	NA	100593594	100599885	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
transcript_97682.known	chrX	-	3768	8	FSM	ENSG00000000003.15	ENST00000373020.9	3768	8	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_3	79.2750314553384	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCATTTCTGGTTTT	0	True	NA	-33	True	AATAAA	-17	NA	100636806	100627107	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
transcript_97687.nic	chrX	-	1752	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-86	-1916	combination_of_known_junctions	FALSE	canonical	3	99	junction_7	365.895937029497	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTGTTTAAATTAACTT	3098	False	NA	-24	True	AATAAA	-20	NA	100636892	100629024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
transcript_977.known	chr1	-	346	2	FSM	ENSG00000238142.3	ENST00000457075.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	18	True	NA	-5	True	AATAAA	-27	NA	16889649	16888541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16888786_16889547
transcript_97709.known	chrX	+	2570	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	22.773128564503	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	-8	True	NA	NA	False	AATAAA	-18	NA	100820390	100841520	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_97710.nic	chrX	+	1942	14	NIC	ENSG00000101811.14	novel	1693	14	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_6	78.4125789932884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACTGCAAATTGATACA	NA	False	NA	20	True	AATAAA	-18	NA	100820370	100840923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826684_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_97715.nic	chrX	+	1392	7	ISM	ENSG00000101811.14	ENST00000415585.6	2074	15	12	13655	12	3020	5prime_fragment	FALSE	canonical	3	266	junction_5	26.2530421517626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAAGAGAAATTTAAA	NA	False	NA	NA	False	CATAAA	-40	NA	100820370	100827277	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633
transcript_97733.known	chrX	-	3106	13	FSM	ENSG00000188917.15	ENST00000545398.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_12	25.4345565455084	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATTCTCTAGTCCA	-14	True	NA	-7	True	AATAAA	-23	NA	101052116	101009345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051783
transcript_9774.nic	chr1	+	601	4	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	26	junction_1	27.7168220079832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-17	True	NA	17	True	AATAAA	-17	NA	222815025	222837384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995
transcript_97749.known	chrX	+	2039	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGGACAAATACTGAA	0	True	NA	22	True	AATAAA	-23	NA	101078878	101096367	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101079123_101094572
transcript_97751.known	chrX	+	5584	22	FSM	ENSG00000102384.14	ENST00000682095.1	5584	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_19	11.1361396112916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTGTGCCTATT	12	True	NA	10	True	AATAAA	-20	NA	101098203	101166126	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_97763.nic	chrX	+	809	7	NIC	ENSG00000102384.14	novel	3377	23	NA	NA	-20	19148	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	8.17856276425687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGGTGAGTATTTTCA	-24	True	NA	NA	False	NA	NA	NA	101098167	101120443	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_101098235_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401
transcript_97765.nic	chrX	+	514	4	ISM	ENSG00000102384.14	ENST00000423383.3	2867	21	15	61029	0	1112	5prime_fragment	FALSE	canonical	3	32	junction_1	5.8878405775519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTGAGGAAATG	12	True	NA	5	True	ATTAAA	-20	NA	101098203	101102407	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273
transcript_97768.known	chrX	-	1210	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	-29	True	NA	-18	True	AATAAA	-18	NA	101348742	101345660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101346661_101348532
transcript_97769.known	chrX	-	2951	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	-29	True	NA	-18	True	AATAAA	-18	NA	101348742	101345660	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101348402_101348532
transcript_9777.nic	chr1	+	673	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	28.0832096931007	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	4	True	NA	17	True	AATAAA	-17	NA	222815046	222837384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995
transcript_97777.known	chrX	-	2575	19	FSM	ENSG00000010671.17	ENST00000308731.8	2575	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.74977952755818	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTATCTCTATTAA	-8	True	NA	NA	False	AATAAA	-20	NA	101386191	101349449	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101349957_101353193_101353352_101353869_101353989_101354629_101354695_101356051_101356269_101356783_101356956_101357508_101357584_101358309_101358438_101358616_101358697_101359292_101359348_101360087_101360151_101360567_101360756_101362172_101362241_101362560_101362690_101369997_101370080_101371632_101371702_101374535_101374635_101375143_101375315_101386061
transcript_97779.known	chrX	-	1358	8	FSM	ENSG00000102393.14	ENST00000493905.6	1358	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	120.695433861858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	7	True	NA	-34	True	ATTAAA	-20	NA	101407908	101397802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101399743_101399801_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_97780.known	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	32.3698247686878	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	-10	True	NA	-34	True	ATTAAA	-20	NA	101407925	101397802	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_97784.known	chrX	-	1431	6	FSM	ENSG00000102393.14	ENST00000466414.2	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	30.8090895678532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATTGCCAACTACT	860	False	NA	-35	True	ATTAAA	-19	NA	101407822	101397803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_97785.known	chrX	+	761	5	FSM	ENSG00000241343.10	ENST00000553110.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	5316	junction_4	1300.52393288244	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGTACACTGTAACAT	18	True	NA	6	True	AATAAA	-22	NA	101391010	101396155	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_97786.known	chrX	+	399	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	3395.84152861997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	209	False	NA	25	True	AATAAA	-19	NA	101391201	101395795	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_97788.known	chrX	-	1420	5	FSM	ENSG00000102393.14	ENST00000675799.1	1420	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	121.516459790433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCTTCAGCTAGAAAA	-3	True	NA	-94	True	CATAAA	-14	NA	101407962	101397862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398947_101401631_101401810_101403810_101403986_101407709
transcript_97789.known	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	668.596706210519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	-4	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
transcript_97790.known	chrX	+	2240	3	FSM	ENSG00000241343.10	ENST00000465340.5	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	818	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATAAGGAAATAAAA	18	True	NA	NA	False	AAAAAG	-9	NA	101391010	101393852	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101391047_101391458_101391565_101391754
transcript_97792.nic	chrX	-	1473	3	ISM	ENSG00000102393.14	ENST00000674634.2	1089	6	-114	2540	-5	-2540	5prime_fragment	FALSE	canonical	3	259	junction_1	31.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGCCCCAGCTGGAAA	665	False	NA	-17	True	AATAAA	-20	NA	101408017	101400819	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_101401810_101403810_101403986_101407709
transcript_97793.known	chrX	+	2296	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	0	803	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	-4	True	NA	28	True	AATAAA	-26	NA	101408221	101414133	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101408320_101411935
transcript_97794.known	chrX	-	1254	7	FSM	ENSG00000102393.14	ENST00000676156.1	1254	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.73011245678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTTATTGCCAA	12	True	NA	-40	True	ATTAAA	-14	NA	101407903	101397808	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401667_101401810_101403810_101403986_101407709
transcript_97796.nnic	chrX	+	2987	14	NNC	ENSG00000196440.12	novel	3788	13	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	4.92427869947053	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAGATTTTTTTACTG	NA	False	NA	11	True	ATTAAA	-16	NA	101485409	101533459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_101485531_101486022_101486093_101487192_101487273_101487607_101487692_101488043_101488100_101488443_101489316_101498144_101498332_101499202_101499367_101504936_101505356_101509358_101509428_101509589_101509679_101511024_101511056_101531643_101532013_101533083
transcript_978.known	chr1	-	1048	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	78	False	NA	-5	True	AATAAA	-27	NA	16889589	16888541	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16888500_16889600
transcript_97803.known	chrX	+	403	4	FSM	ENSG00000196440.12	ENST00000430461.5	403	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTAGAAAAACAATTTTA	15	False	NA	NA	False	NA	NA	NA	101418297	101446132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997
transcript_97807.nnic	chrX	+	1520	5	NNC	ENSG00000126947.13	novel	2125	4	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	93.4675745914058	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	-5	True	NA	29	True	AATAAA	-30	NA	101550514	101554700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808_101553285_101553921
transcript_97808.known	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	22.7596133534821	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	-8	True	NA	29	True	AATAAA	-30	NA	101550546	101554700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
transcript_9781.known	chr1	+	373	4	FSM	ENSG00000154309.9	ENST00000669958.1	373	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.2960963117119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCCTTGTTTTTTTTG	1	True	NA	13	True	AATAAA	-13	NA	222815128	222837380	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815172_222835118_222835216_222836995_222837067_222837218
transcript_97811.known	chrX	-	542	5	FSM	ENSG00000198960.11	ENST00000462302.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	69.6971125657297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTGCAGGCAATGTT	53	False	NA	NA	False	GGGGCT	-31	NA	101617913	101615512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101615761_101616671_101616767_101617282_101617371_101617502_101617585_101617884
transcript_97812.nic	chrX	-	1022	5	NIC	ENSG00000198960.11	novel	542	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	69.1967304140882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	-41	True	NA	NA	False	AATAAA	-28	NA	101618007	101615117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_101615761_101616671_101616767_101617291_101617371_101617502_101617585_101617884
transcript_97815.known	chrX	-	846	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	22.4251842554055	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	56	False	NA	NA	False	AATAAA	-28	NA	101617910	101615117	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
transcript_97816.nnic	chrX	-	643	4	NNC	ENSG00000198960.11	novel	1840	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	73.3136337176714	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	-41	True	NA	NA	False	AATAAA	-21	NA	101618007	101615124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_101615468_101616671_101616767_101617502_101617585_101617884
transcript_97819.known	chrX	-	1840	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	1.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	-34	True	NA	NA	False	AATAAA	-21	NA	101618000	101615124	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101616767_101617502_101617585_101617884
transcript_9782.known	chr1	+	556	3	FSM	ENSG00000154309.9	ENST00000426045.5	556	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTGTTATGTGAGAG	-6	True	NA	-28	True	NA	NA	NA	222815036	222837339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815079_222835118_222835216_222836922
transcript_97820.known	chrX	-	1928	4	FSM	ENSG00000198960.11	ENST00000539247.5	1928	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	74.7454941042528	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGAGTCATGGTCCTT	-35	True	NA	NA	False	AATAAA	-20	NA	101618001	101615125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101616767_101617282_101617371_101617502_101617585_101617884
transcript_97822.known	chrX	+	3348	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	40.8839821935193	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	-9	True	NA	27	True	AATAAA	-37	NA	101623150	101627843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_97825.known	chrX	+	3730	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	36.6776498701866	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	NA	False	NA	27	True	AATAAA	-37	NA	101622796	101627843	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_97828.known	chrX	+	3318	5	FSM	ENSG00000102401.20	ENST00000537169.1	3318	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	75.4730912312461	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	201	False	NA	25	True	AATAAA	-35	NA	101623360	101627841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623431_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_9783.known	chr1	+	543	3	FSM	ENSG00000154309.9	ENST00000450784.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	38	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-21	True	NA	17	True	AATAAA	-17	NA	222815021	222837384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815079_222835118_222835216_222836995
transcript_97831.known	chrX	+	506	5	FSM	ENSG00000102401.20	ENST00000467808.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	76.3327419918871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGCTATTGTCGGGGA	96	False	NA	NA	False	NA	NA	NA	101623255	101624952	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_101623431_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_97836.known	chrX	-	758	6	FSM	ENSG00000184867.14	ENST00000458024.5	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	95.4031446022614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGAGGCAGTGGCCC	18	False	NA	NA	False	NA	NA	NA	101659831	101657310	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659137_101659418_101659502_101659757
transcript_97837.known	chrX	-	821	6	FSM	ENSG00000184867.14	ENST00000440675.5	821	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	110.608498769308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTCAGAGTGGGGCAG	14	False	NA	NA	False	NA	NA	NA	101659835	101657274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659407_101659502_101659757
transcript_97839.known	chrX	-	2819	6	FSM	ENSG00000184867.14	ENST00000356824.9	2819	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_4	41.5230056715551	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	-1	True	NA	-3	True	AATAAA	-25	NA	101659850	101655280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659418_101659502_101659757
transcript_9784.known	chr1	+	621	3	FSM	ENSG00000154309.9	ENST00000661663.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	19	True	NA	17	True	AATAAA	-17	NA	222815109	222837384	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815172_222835118_222835216_222836922
transcript_97844.known	chrX	-	612	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	95.8507172638786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATACACCAGGGGGA	13	False	NA	NA	False	GGGGCT	-18	NA	101659836	101657517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
transcript_97847.nic	chrX	-	2849	6	NIC	ENSG00000184867.14	novel	2819	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	114.794424951737	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	-3	True	AATAAA	-25	NA	101659867	101655280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_101657716_101658072_101658143_101658491_101658570_101659075_101659149_101659418_101659502_101659757
transcript_9785.known	chr1	+	445	3	FSM	ENSG00000154309.9	ENST00000420335.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	38	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGAGCTGTCTCTCCAC	1	True	NA	-67	True	NA	NA	NA	222815128	222837300	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815172_222835118_222835216_222836995
transcript_97856.known	chrX	-	914	5	FSM	ENSG00000184867.14	ENST00000413506.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	114.2702389076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCGGAGACTTCCAGG	15	False	NA	NA	False	GGGGCT	-23	NA	101659834	101657086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659757
transcript_9786.known	chr1	+	771	5	FSM	ENSG00000154309.9	ENST00000435378.6	771	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	36.0026040724834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTTTTTTTTGGTATT	16	True	NA	18	True	AATAAA	-18	NA	222815058	222837385	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815079_222823855_222823946_222827427_222827602_222835118_222835216_222836995
transcript_97862.known	chrX	-	580	5	FSM	ENSG00000184867.14	ENST00000431597.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	123.780046857319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTTGGGTCAGGATTCA	53	False	NA	NA	False	NA	NA	NA	101659796	101657400	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101659075_101659149_101659418_101659502_101659757
transcript_97868.known	chrX	-	2762	5	FSM	ENSG00000184867.14	ENST00000328766.9	2762	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	137.124031445987	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	5	True	NA	-3	True	AATAAA	-25	NA	101659844	101655280	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659137_101659757
transcript_97869.known	chrX	+	1080	3	FSM	ENSG00000184905.9	ENST00000329035.2	1080	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	87	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACAGAATCTGTCTGTT	21	False	NA	16	True	AATAAA	-16	NA	102125702	102127711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102125807_102126372_102126446_102126808
transcript_9787.known	chr1	+	517	5	FSM	ENSG00000154309.9	ENST00000457636.5	517	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.1686991265398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGTTTTTTTTGGTA	-13	True	NA	16	True	AATAAA	-16	NA	222815077	222837383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_222815172_222823855_222823946_222835118_222835216_222836995_222837067_222837218
transcript_97870.known	chrX	-	777	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	3.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGATAGACTATTTC	-17	True	NA	-22	True	AATAAA	-15	NA	102155977	102153711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_102154303_102154743_102154811_102155858
transcript_97871.nic	chrX	-	181	2	ISM	ENSG00000184515.11	ENST00000333643.4	777	3	6	1031	6	-3	5prime_fragment	FALSE	canonical	3	136	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTGCCTGGGGCCC	-11	True	NA	-3	True	NA	NA	NA	102155971	102154742	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_102154811_102155858
transcript_97872.known	chrX	-	634	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	0	0	0	multi-exon	TRUE	canonical	3	1351	junction_1	27	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGACTCCTGTGGTTG	11	True	NA	-12	True	AATAAA	-20	NA	102516739	102513681	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_102514125_102515063_102515181_102516665
transcript_97882.known	chrX	+	645	6	FSM	ENSG00000271147.8	ENST00000460026.6	645	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	36.4581952378337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAGAGAAGCTGGCTTT	-3	True	NA	NA	False	AATAGA	-25	NA	102599524	102639538	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399
transcript_97884.known	chrX	+	1848	6	FSM	ENSG00000271147.8	ENST00000476910.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	30.5286750449475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGGCTTCTTTTACT	9	True	NA	NA	False	AATACA	-14	NA	102599536	102640507	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879_102601978_102605481_102605654_102639399
transcript_9789.known	chr1	-	1056	6	FSM	ENSG00000143502.16	ENST00000344029.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.44093010681705	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCATTTTTATCCTATA	2	True	NA	NA	False	AATAAA	-17	NA	223364167	223234914	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_223235101_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_97894.nic	chrX	+	1429	3	NIC	ENSG00000271147.8	novel	755	4	NA	NA	1	-186	intron_retention	FALSE	canonical	3	14	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTGTGTTACAGCAC	-15	True	NA	7	True	AATAAA	-19	NA	102599512	102640321	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_102599848_102605481_102605654_102639399
transcript_97898.known	chrX	+	2899	6	FSM	ENSG00000125962.16	ENST00000246174.6	2899	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	35.5674008046694	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	NA	False	NA	26	True	AATAAA	-25	NA	102599167	102604159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599267_102599347_102599573_102599711_102599848_102600919_102601033_102601463_102601510_102601879
transcript_979.known	chr1	+	164	1	FSM	ENSG00000207005.1	ENST00000384278.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTGGAGTTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	16895979	16896143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_16896000_16896100
transcript_9790.nic	chr1	+	2647	18	ISM	ENSG00000162909.18	ENST00000295006.6	3366	21	32779	179	-1790	-177	3prime_fragment	FALSE	canonical	2	100	junction_7	17.6666557855073	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCATGCCATGTTTTC	1151	False	NA	7	True	AATAAA	-23	NA	223745317	223775839	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_+_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223769910_223770446_223770526_223771808_223771926_223772180_223772240_223774833
transcript_97900.nic	chrX	+	2527	4	NIC	ENSG00000125962.16	novel	2899	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	34.08160142299	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-20	True	NA	26	True	AATAAA	-25	NA	102599507	102604159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_102599573_102599711_102599848_102601463_102601510_102601879
transcript_97901.nic	chrX	+	2539	4	NIC	ENSG00000125962.16	novel	2899	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	39.6736688497547	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-20	True	NA	26	True	AATAAA	-25	NA	102599507	102604159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_102599573_102599711_102599860_102601463_102601510_102601879
transcript_97902.known	chrX	+	2777	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	37	junction_1	33.1595469745224	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-18	True	NA	26	True	AATAAA	-25	NA	102599509	102604159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
transcript_97903.known	chrX	+	2636	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	11.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	10	True	NA	26	True	AATAAA	-25	NA	102599537	102604159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599848_102601463_102601510_102601879
transcript_97904.known	chrX	+	2664	3	FSM	ENSG00000125962.16	ENST00000477663.6	2664	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	43.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-6	True	NA	26	True	AATAAA	-25	NA	102599521	102604159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102599860_102601463_102601510_102601879
transcript_97905.known	chrX	+	3534	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	0	2	0	0	multi-exon	TRUE	canonical	0	0	junction_1	33.3204141630923	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	-3	True	NA	16	True	AATAAA	-19	NA	102712447	102717731	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
transcript_97906.known	chrX	+	4031	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	1	True	NA	19	True	AATAAA	-15	NA	102745978	102752438	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_102746175_102747816_102747912_102748698
transcript_97916.known	chrX	-	795	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	19.5	1217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATATTCTTTTTTTGT	0	True	NA	-5	True	AATAAA	-18	NA	103064171	103062650	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103063280_103063641_103063732_103064095
transcript_97918.known	chrX	-	1956	20	FSM	ENSG00000147206.17	ENST00000395065.8	1956	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.493727974718256	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTGAGTCAGGCATTA	-13	True	NA	NA	False	AATAAA	-35	NA	103093143	103075809	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103076001_103076240_103076302_103077613_103077747_103078559_103078633_103079220_103079264_103079358_103079475_103079583_103079643_103079762_103079871_103080012_103080069_103080147_103080217_103080575_103080613_103082254_103082365_103082759_103082849_103083003_103083074_103083192_103083274_103083397_103083503_103083608_103083693_103084341_103084496_103084714_103084884_103092995
transcript_97919.known	chrX	+	1312	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	17.5	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	-10	True	NA	66	True	ATTAAA	-25	NA	103215107	103217246	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103215239_103215681_103215765_103216148
transcript_97923.known	chrX	+	1066	2	FSM	ENSG00000102409.10	ENST00000372691.3	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGGTGTGTGTGTACG	6	True	NA	-81	True	NA	NA	NA	103215123	103217099	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103215239_103216148
transcript_97924.known	chrX	-	1131	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	17	False	103255193	NA	False	AATAAA	-20	NA	103255185	103252994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103254018_103255077
transcript_97926.known	chrX	-	1174	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_1	28	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	-3	True	NA	NA	False	AATAAA	-20	NA	103255155	103252994	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103254018_103254604_103254678_103255077
transcript_97928.nnic	chrX	-	1195	3	NNC	ENSG00000204065.3	novel	1046	3	NA	NA	505	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	33	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	757	False	NA	-1	True	AATAAA	-21	NA	103276245	103273690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_103274591_103275274_103275343_103276018
transcript_97929.known	chrX	-	1046	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_2	9.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	-1	True	NA	-1	True	AATAAA	-21	NA	103276750	103273690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103274591_103275274_103275343_103276672
transcript_97930.known	chrX	-	843	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	36	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCATTCTTTTTTAC	19	False	103311009	-21	True	AATAAA	-17	NA	103310990	103309345	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103309982_103310357_103310434_103310859
transcript_97931.known	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	249	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	2	True	NA	NA	False	NA	NA	NA	103311007	103309501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103309982_103310357_103310434_103310895
transcript_97932.known	chrX	+	1134	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	10.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	11	True	NA	NA	False	AATAAA	-20	NA	103330238	103332326	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103330305_103330922_103331041_103331376
transcript_97934.known	chrX	+	1028	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_2	29.5	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCAGCACGTATTA	7	True	NA	6	True	AATAAA	-18	NA	103356505	103358462	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103356607_103357082_103357162_103357614
transcript_97935.known	chrX	+	699	2	FSM	ENSG00000185222.10	ENST00000372656.5	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACACATTTGTAAAAAA	-10	True	NA	8	True	AATAAA	-5	NA	103356488	103358195	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103356607_103357614
transcript_97938.known	chrX	+	1938	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	19	True	NA	-1	True	AATAAA	-11	NA	103356517	103358455	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103356500_103358500
transcript_9794.nnic	chr1	+	2024	5	NNC	ENSG00000185495.10	novel	758	4	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.12071817347735	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTGGTGGACTC	NA	False	NA	9	True	AATAAA	-18	NA	223992748	224010608	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_223993048_223995894_223996095_224002521_224002623_224003519_224003655_224009319
transcript_97940.known	chrX	+	913	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_2	2535	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTATTGTCTCATTAA	34	True	NA	48	True	AATAAA	-21	NA	103376394	103378077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103376614_103377027_103377107_103377462
transcript_97941.known	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	4923	junction_2	646.5	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	1	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103376614_103377027_103377107_103377509
transcript_97946.known	chrX	+	805	2	FSM	ENSG00000166681.14	ENST00000372635.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAGCAATCTATAC	46	False	NA	31	True	AATAAA	-4	NA	103376406	103378060	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103376614_103377462
transcript_97947.known	chrX	+	753	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	4923	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	0	True	NA	42	True	AATAAA	-15	NA	103376915	103378071	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103377107_103377509
transcript_97961.known	chrX	+	681	4	FSM	ENSG00000133142.19	ENST00000490644.5	681	4	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_2	461.454945435269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGGGAGAGTCAGAGA	0	True	NA	78	True	GATAAA	-45	NA	103585522	103586905	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103585858_103586108_103586218_103586292_103586648
transcript_97963.known	chrX	+	1008	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	452	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTACATTTTTGTAAAA	40	True	NA	23	True	ATTAAA	-31	NA	103585562	103587526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103586218_103586292_103586653
transcript_97965.known	chrX	+	1571	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	468.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	10	True	NA	-19	True	AAAACA	-11	NA	103585532	103587694	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103585858_103586292_103586648
transcript_97966.known	chrX	+	338	3	FSM	ENSG00000133142.19	ENST00000425011.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	73.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGGATAAAGGAAAGCC	14	False	NA	22	True	AAAACA	-27	NA	103585614	103586849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585684_103586218_103586292_103586653
transcript_97968.known	chrX	+	959	2	FSM	ENSG00000133142.19	ENST00000415568.2	959	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTGCAGAACCAAATATA	-8	True	NA	-1	True	ATTAAA	-7	NA	103585514	103587502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103585625_103586653
transcript_97969.known	chrX	+	1166	4	NNC	ENSG00000133142.19	novel	1008	3	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	482.096348138926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGTGAATATTTGAAT	-6	True	NA	12	True	AATAAA	-15	NA	103585516	103587725	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_103585625_103586218_103586292_103586653_103586862_103586948
transcript_97970.known	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	16	True	NA	16	True	AATAAA	-32	NA	103607962	103609927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103608059_103608603_103608674_103609037
transcript_97971.known	chrX	+	1124	3	FSM	ENSG00000196507.11	ENST00000243286.7	1124	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	45.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGTATCAGCCCGTT	NA	False	NA	15	True	AATAAA	-31	NA	103607905	103609926	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103608071_103608603_103608674_103609037
transcript_97973.known	chrX	+	1164	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	28	False	NA	NA	False	AATAAA	-24	NA	103628998	103630953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103629026_103629493_103629562_103629884
transcript_97974.nic	chrX	+	1273	2	ISM	ENSG00000172465.14	ENST00000372624.3	1164	3	359	0	359	0	3prime_fragment	FALSE	canonical	3	14	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	387	False	NA	NA	False	AATAAA	-24	NA	103629357	103630953	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_103629562_103629884
transcript_97980.nic	chrX	-	2030	5	NIC	ENSG00000123562.18	novel	869	5	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	272	junction_2	785.337944772822	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	1236	False	NA	-5	True	AATAAA	-25	NA	103686865	103675497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103686630
transcript_97981.known	chrX	-	849	5	FSM	ENSG00000123562.18	ENST00000418819.5	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	740.426566244081	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTAATGAAGTTGTGGC	17	True	NA	NA	False	AAGAAA	-31	NA	103688041	103676496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103687988
transcript_97982.known	chrX	-	562	5	FSM	ENSG00000123562.18	ENST00000422355.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	857.88967093677	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGATCCGTGAGGAAG	2	True	NA	NA	False	NA	NA	NA	103686705	103676825	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678621_103684680_103684730_103685170_103685261_103686630
transcript_97985.known	chrX	-	869	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	800.464357420116	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGTATGCAAATTG	-2	True	NA	NA	False	AAGAAA	-16	NA	103686709	103676553	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
transcript_97986.known	chrX	-	899	5	FSM	ENSG00000123562.18	ENST00000434230.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	749.48332202925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATGAAGTTGTGGCAG	20	True	NA	NA	False	AAGAAA	-33	NA	103688038	103676494	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103687988
transcript_97990.known	chrX	-	451	4	FSM	ENSG00000123562.18	ENST00000498064.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	492.100260787034	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	1285	False	NA	NA	False	NA	NA	NA	103686816	103676978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103686630
transcript_97992.known	chrX	-	1824	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	743.615641458827	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	-6	True	NA	-3	True	AATAAA	-27	NA	103688064	103675495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
transcript_97993.nnic	chrX	-	1851	4	NIC	ENSG00000123562.18	novel	1866	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_2	902.368365284747	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	-8	True	NA	-5	True	AATAAA	-25	NA	103686715	103675497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_103677052_103678498_103678621_103685170_103685261_103686630
transcript_97995.known	chrX	-	370	4	FSM	ENSG00000123562.18	ENST00000467755.5	370	4	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_2	674.720847626796	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	1417	False	NA	NA	False	NA	NA	NA	103686684	103676978	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103686630
transcript_97997.known	chrX	-	1965	4	FSM	ENSG00000123562.18	ENST00000433176.6	1965	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	787.978144084946	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-7	True	AATAAA	-23	NA	103688158	103675499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103687988
transcript_98.known	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_1	0	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_+_1886_2251
transcript_980.nnic	chr1	-	1048	10	NNC	ENSG00000117122.14	novel	1045	9	NA	NA	-27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	1612.35083337236	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-25	True	NA	NA	False	ATTAAA	-18	NA	16980659	16974501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586_16980611_16980646
transcript_9800.known	chr1	+	5427	5	FSM	ENSG00000143756.12	ENST00000366862.10	5427	5	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_1	3.80788655293195	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTTCTTTGTATT	1	True	NA	10	True	AATAAA	-17	NA	224114110	224162047	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224153141_224153338_224157351
transcript_98002.known	chrX	-	1830	3	FSM	ENSG00000123562.18	ENST00000451301.5	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	916	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	1283	False	NA	-7	True	AATAAA	-23	NA	103686818	103675499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103685170_103685261_103686630
transcript_98003.known	chrX	-	582	3	FSM	ENSG00000123562.18	ENST00000492116.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	76.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGTTTAAGAATAGA	NA	False	NA	NA	False	AAGAAA	-32	NA	103688122	103676693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103677052_103685170_103685261_103687988
transcript_98004.known	chrX	-	326	2	FSM	ENSG00000123562.18	ENST00000488331.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCCCTTGATAAAAGAT	74	False	NA	NA	False	NA	NA	NA	103688027	103684973	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103685261_103687988
transcript_98006.nnic	chrX	-	621	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1580	912	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	74	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTGAGAGTATACATAA	-5	True	NA	NA	False	AATAAA	-19	NA	103767035	103748485	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_103748662_103764961_103765155_103766783
transcript_98011.nic	chrX	-	867	3	NIC	ENSG00000288597.1	novel	2186	12	NA	NA	1502	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	54	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	9599	False	NA	0	True	ATTAAA	-22	NA	103767113	103761191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_103761536_103764961_103765155_103766783
transcript_98012.nic	chrX	-	870	3	ISM	ENSG00000288597.1	ENST00000674274.1	2186	12	65120	0	1502	0	3prime_fragment	FALSE	canonical	3	37	junction_1	56	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	9599	False	NA	0	True	ATTAAA	-22	NA	103767113	103761191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_103761539_103764961_103765155_103766783
transcript_98013.known	chrX	-	4080	2	FSM	ENSG00000288597.1	ENST00000674403.1	4080	2	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATCTCTCTTATTTA	8097	False	NA	NA	False	AATAAA	-8	NA	103768615	103762906	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103765155_103766783
transcript_98019.known	chrX	+	2896	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_6	24.7549097262655	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	9	True	NA	14	True	AATAAA	-23	NA	103776849	103792619	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_98024.known	chrX	+	663	4	FSM	ENSG00000158427.15	ENST00000569577.1	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	107.058654743816	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAATCGTTGTTGTCT	27	False	NA	NA	False	AATAAA	-6	NA	103962674	103965968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103962724_103964227_103964295_103964505_103964623_103965538
transcript_98025.known	chrX	-	1918	4	FSM	ENSG00000231728.5	ENST00000653685.2	1918	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGATCATATTTGTTA	9	True	NA	NA	False	AATAAA	-26	NA	103919088	103880645	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103882116_103918086_103918226_103918408_103918461_103918831
transcript_98026.known	chrX	+	652	3	FSM	ENSG00000158427.15	ENST00000540220.6	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	14.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	4	True	NA	NA	False	AATAAA	-14	NA	103962626	103965976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_103962724_103964505_103964623_103965538
transcript_98027.known	chrX	-	575	2	FSM	ENSG00000231728.5	ENST00000674328.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGTCCAACATTTT	60	False	NA	-16	True	ATTAAA	-11	NA	103919037	103881746	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_103882116_103918831
transcript_98028.known	chrX	-	2286	3	FSM	ENSG00000269226.7	ENST00000620307.4	2286	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	119	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAAGGGTATTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	104076194	104063870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_104065985_104074240_104074358_104076139
transcript_9803.known	chr1	+	957	3	FSM	ENSG00000143753.13	ENST00000415210.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACAACCTCCCTCAC	NA	False	NA	NA	False	NA	NA	NA	224175755	224192353	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224175948_224189576_224190320_224192331
transcript_98030.known	chrX	+	1241	4	FSM	ENSG00000166707.12	ENST00000422784.5	1241	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.24721912892465	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	14	False	NA	10	True	TATAAA	-8	NA	104112543	104115842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_104113002_104113194_104113247_104113433_104113574_104115251
transcript_98033.nnic	chrX	-	2159	3	NNC	ENSG00000269743.3	novel	6207	2	NA	NA	44592	-1085	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCATACAACACAATATAT	NA	False	NA	NA	False	AATAAA	-5	NA	104112396	104100298	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_104102211_104111307_104111474_104112315
transcript_98034.known	chrX	-	731	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATAGTGGGATGCTT	4	True	NA	NA	False	NA	NA	NA	104156988	104130603	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_104131224_104156877
transcript_98036.nic	chrX	+	1348	11	ISM	ENSG00000123572.17	ENST00000428173.3	5201	23	-74	33370	-32	11214	5prime_fragment	FALSE	canonical	2	9	junction_2	2.93428015022424	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGAAAAAAGGTAGAATC	-7	True	NA	NA	False	ATTAAA	-5	NA	105822506	105906577	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_105822903_105831053_105831120_105880198_105880256_105881707_105881780_105888293_105888420_105893831_105893943_105895432_105895524_105898583_105898715_105900617_105900673_105905264_105905344_105906413
transcript_98037.known	chrX	+	4173	4	FSM	ENSG00000157502.13	ENST00000357175.6	4173	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATTTTTACTTCATC	-4	True	NA	16	True	AATAAA	-17	NA	106168304	106208956	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106168426_106171011_106171140_106203984_106204171_106205218
transcript_98039.known	chrX	+	3852	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	7.15095061334898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTGGTCTCCTGTC	16	True	NA	6	True	ATTAAA	-16	NA	106611977	106679439	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_98040.known	chrX	+	2880	13	FSM	ENSG00000147231.14	ENST00000421550.1	2880	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	9.14201229975594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	588	False	NA	4	True	ATTAAA	-14	NA	106612656	106679437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637795_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_98042.known	chrX	+	3607	13	FSM	ENSG00000147231.14	ENST00000372544.6	3607	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	9.14201229975594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	NA	False	NA	4	True	ATTAAA	-14	NA	106611929	106679437	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637795_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_98043.known	chrX	+	2589	12	FSM	ENSG00000133138.20	ENST00000310452.6	2589	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	4.23093682844367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTGTGTTTCTGA	-26	True	NA	NA	False	AATAAA	-26	NA	106802688	106849831	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106849244
transcript_98045.known	chrX	+	4098	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.39934634239519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATTTATAAGAAAAA	-10	True	NA	NA	False	AATGAA	-4	NA	106802704	106830083	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
transcript_98048.nic	chrX	+	1448	4	ISM	ENSG00000133138.20	ENST00000481617.6	4098	7	-64	7232	-32	1856	5prime_fragment	FALSE	canonical	3	8	junction_1	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTAGCTGGGCATGGT	NA	False	NA	NA	False	AATATA	-36	NA	106802640	106822851	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976
transcript_98050.known	chrX	-	2579	8	FSM	ENSG00000089682.17	ENST00000372487.5	2579	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	27.4114529914421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGTGT	9	True	NA	NA	False	NA	NA	NA	107118800	107064419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107065759_107067555_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_98052.nic	chrX	-	2596	8	FSM	ENSG00000089682.17	ENST00000685964.1	7005	8	-6	4415	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	28.6128271506159	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTACAGACAGATACAT	-19	True	NA	NA	False	AAGAAA	-3	NA	107118828	107066299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_98056.nic	chrX	-	1758	8	FSM	ENSG00000089682.17	ENST00000685964.1	7005	8	-6	5253	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	28.6128271506159	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	-19	True	NA	-14	True	AATAAA	-21	NA	107118828	107067137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_98063.known	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	16.709943812659	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	5	True	NA	-14	True	AATAAA	-21	NA	107118804	107067137	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_9807.known	chr1	+	2032	3	FSM	ENSG00000143753.13	ENST00000323699.9	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	25.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	16	True	NA	19	True	AATAAA	-28	NA	224183239	224193441	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224183419_224189576_224190320_224192331
transcript_98074.known	chrX	-	3315	8	FSM	ENSG00000089682.17	ENST00000495517.5	3315	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.8704294988351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTACAGACAGATACAT	-14	True	NA	NA	False	AAGAAA	-3	NA	107118823	107066299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107067694_107069254_107070426_107088734_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_98075.nic	chrX	-	1790	9	NIC	ENSG00000198088.10	novel	1755	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	9.15747645369618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	33	False	NA	-49	True	AATAAA	-21	NA	107206445	107123471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_107124333_107147742_107147810_107150855_107150968_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107206272
transcript_98076.nic	chrX	-	1678	8	NIC	ENSG00000198088.10	novel	1755	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	6.40153042925945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	33	False	NA	-49	True	AATAAA	-21	NA	107206445	107123471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107206272
transcript_98078.known	chrX	-	1515	7	FSM	ENSG00000198088.10	ENST00000484614.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.03957069398096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	2	True	NA	-49	True	AATAAA	-21	NA	107206433	107123471	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107167648_107167785_107175088_107175194_107206272
transcript_98082.known	chrX	+	2070	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	23.0120741254576	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	6	True	NA	19	True	AATAAA	-19	NA	107628509	107651026	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_98084.known	chrX	+	1434	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	123.427063482852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAACCCCAAACCTAGTC	-14	True	NA	NA	False	NA	NA	NA	107628489	107650469	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_98086.known	chrX	-	1812	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	36	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	5423	False	NA	NA	False	AATAAA	-27	NA	107716545	107713220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107714750_107715898_107715951_107716314
transcript_98087.known	chrX	-	2027	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	4833	False	NA	NA	False	AATAAA	-27	NA	107717135	107713220	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_107714750_107715898_107715951_107716689
transcript_98089.known	chrX	-	779	6	FSM	ENSG00000101843.19	ENST00000372295.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	242.225019351842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTTCTACTGTTGT	-3	True	NA	NA	False	NA	NA	NA	108091542	108084774	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087685_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_98090.known	chrX	-	878	6	FSM	ENSG00000101843.19	ENST00000372296.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	282.784299422723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAATGTTCCTCCAT	-3	True	NA	NA	False	NA	NA	NA	108091542	108084596	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087764_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_98091.known	chrX	-	1470	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_2	35.7936796096741	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAATTTTTCTTTCAA	-3	True	NA	-6	True	AATAAA	-13	NA	108091542	108084206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
transcript_98092.known	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	234.772762474696	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	-3	True	NA	NA	False	TATAAA	-19	NA	108091542	108084829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
transcript_98093.known	chrX	-	713	4	FSM	ENSG00000101843.19	ENST00000340200.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	267.802580686263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGTTCCTGCTGAG	44	False	NA	NA	False	TATAAA	-6	NA	108091520	108084842	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108091406
transcript_98095.known	chrX	+	2501	14	FSM	ENSG00000101844.18	ENST00000372246.7	2501	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.37013569768335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	10	True	NA	14	True	AATAAA	-22	NA	108091783	108154671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_108091837_108126076_108126188_108126792_108127095_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_98096.known	chrX	+	2205	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.60901893634161	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	4	True	NA	14	True	AATAAA	-22	NA	108091777	108154671	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_98098.nic	chrX	-	1107	14	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-21	40954	-21	17230	5prime_fragment	FALSE	canonical	3	114	junction_7	26.8414146136439	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGGAGAAAAGGGAGA	-19	True	NA	-8	True	NA	NA	NA	108438451	108196561	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_98101.known	chrX	-	865	6	FSM	ENSG00000197565.17	ENST00000468338.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	61.6817639177091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAATATTGAGGAATGTT	11	False	NA	NA	False	AATACA	-31	NA	108439472	108213791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108439357
transcript_98102.nic	chrX	-	2144	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-21	57056	-21	1128	5prime_fragment	FALSE	canonical	3	139	junction_2	25.2871508873578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAGAAAAAAAAAACGGTT	-19	True	NA	NA	False	AATAAA	-28	NA	108438451	108212663	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_98104.nic	chrX	-	1963	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-21	57237	-21	947	5prime_fragment	FALSE	canonical	3	139	junction_2	25.2871508873578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTTCTGTCTCTTAACT	-19	True	NA	NA	False	AATAAA	-45	NA	108438451	108212844	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_98105.nic	chrX	-	1016	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-21	58184	-21	0	5prime_fragment	FALSE	canonical	3	139	junction_2	25.2871508873578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAATATTGAGGAATGTT	-19	True	NA	NA	False	AATACA	-31	NA	108438451	108213791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_98106.nic	chrX	-	870	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-21	58330	-21	-146	5prime_fragment	FALSE	canonical	3	139	junction_2	25.2871508873578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGCAGTGGGGTGTGC	-19	True	NA	-8	True	AGTAAA	-17	NA	108438451	108213937	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_98108.known	chrX	-	1889	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	86.4908472999696	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTATGTATGTA	2	True	NA	-19	True	AATAAA	-19	NA	108438430	108267641	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
transcript_98115.nic	chrX	+	1423	2	ISM	ENSG00000188153.14	ENST00000510690.2	1581	11	20814	-1156	1651	0	3prime_fragment	FALSE	canonical	3	291	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	NA	False	NA	22	True	ATTAAA	-19	NA	108695265	108697545	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_108695440_108696296
transcript_98116.known	chrX	-	6563	2	FSM	ENSG00000133124.12	ENST00000372129.4	6563	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTAGAGATTCATTTT	-1	True	NA	-1	True	AATAAA	-18	NA	108736563	108719945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_108722524_108732578
transcript_98117.known	chrX	+	2692	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	58.349700084919	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	0	True	NA	13	True	AATAAA	-14	NA	109535780	109544684	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
transcript_98118.known	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	5.31245915016974	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	-7	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
transcript_98119.known	chrX	+	1085	4	FSM	ENSG00000101888.12	ENST00000372103.1	1085	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	55.934485486743	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTCAGTGGTCGTT	135	False	NA	NA	False	NA	NA	NA	109537117	109543206	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_109537271_109538044_109538132_109541474_109541620_109542506
transcript_98122.known	chrX	-	5032	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	46.4698707647104	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATTTGTACTTCATT	475	False	NA	-17	True	AATAAA	-16	NA	109733403	109641336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
transcript_98123.known	chrX	-	4602	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	47.3368842684528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTTGGAGAGAA	26	True	NA	-115	True	GATAAA	-11	NA	109733220	109641533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
transcript_98125.known	chrX	-	4971	15	FSM	ENSG00000068366.21	ENST00000502391.6	4971	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	46.8419509344662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATGAGAACAGATAAAGAT	553	False	NA	NA	False	NA	NA	NA	109733325	109641560	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109733138
transcript_98130.known	chrX	-	5350	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	17.3020230031057	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCATTTTATGTTTCTT	25	True	NA	-7	True	AATAAA	-14	NA	110318085	110194185	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
transcript_98131.known	chrX	-	3052	5	FSM	ENSG00000101935.12	ENST00000372059.6	3052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	63.4049485450465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGTAAATAAAACAAGCAA	26	True	NA	NA	False	AAAAAG	-7	NA	110318084	110196371	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110317598
transcript_98135.nnic	chrX	+	2613	16	NIC	ENSG00000077264.16	novel	2550	16	NA	NA	39	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	9.38414738919963	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	0	True	NA	NA	False	AAAAAG	-20	NA	110944323	111220945	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_110944629_111103158_111103307_111123076_111123279_111142095_111142197_111147736_111147891_111152409_111152448_111162914_111163047_111163561_111163728_111173017_111173082_111192126_111192176_111192505_111192619_111194300_111194419_111195841_111195942_111196443_111196641_111216420_111216559_111220357
transcript_98140.known	chrX	-	3532	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	8.44590630621328	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTGACTTGAATTGA	11	True	NA	1	True	AATAAA	-21	NA	111270483	111245098	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
transcript_98142.known	chrX	-	9163	7	FSM	ENSG00000077279.20	ENST00000635795.1	9163	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTGACATTCTTTT	NA	False	NA	0	True	AATAAA	-15	NA	111412272	111293778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_111301744_111312641_111312737_111330903_111331042_111333050_111333154_111400989_111401331_111410034_111410421_111412137
transcript_98143.known	chrX	-	2476	7	FSM	ENSG00000077279.20	ENST00000488120.2	2476	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTAGTTTAGAAATTAT	NA	False	NA	NA	False	AAAAAG	-9	NA	111412429	111300607	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_111301744_111312641_111312737_111330918_111331042_111333050_111333154_111400989_111401331_111410034_111410421_111412137
transcript_98144.known	chrX	-	6162	7	FSM	ENSG00000077279.20	ENST00000637570.1	6162	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	1.49071198499986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTCCTGCCTCAGTCT	11	True	NA	NA	False	NA	NA	NA	111412181	111296676	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_111301744_111312638_111312737_111330918_111331042_111333050_111333154_111400989_111401331_111410034_111410421_111412137
transcript_98150.known	chrX	+	1098	5	FSM	ENSG00000101901.12	ENST00000492038.5	1098	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.5538985608922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGGACTTATACCAA	-7	True	NA	NA	False	NA	NA	NA	111681193	111688642	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681300_111682235_111682295_111684964_111685104_111686136_111686175_111687886
transcript_98153.known	chrX	+	2770	4	FSM	ENSG00000101901.12	ENST00000371979.7	2770	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	20.5426385841741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTGAAATGTTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	111681117	111690172	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111687886
transcript_98159.known	chrX	+	916	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	29.5296461204668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTGGAATTGGAATC	-22	True	NA	NA	False	NA	NA	NA	111681178	111688254	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
transcript_98161.known	chrX	+	679	4	FSM	ENSG00000101901.12	ENST00000482374.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	35.5246393366632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTTATGTTGTGCAC	-9	True	NA	19	True	AATAAA	-25	NA	111681191	111688134	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681425_111682235_111682295_111684964_111685104_111687886
transcript_98163.known	chrX	+	620	4	FSM	ENSG00000101901.12	ENST00000482742.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.8854278742681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	0	True	NA	-75	True	AATAAA	-39	NA	111681662	111688040	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681827_111682131_111682295_111684964_111685104_111687886
transcript_98165.known	chrX	+	458	4	FSM	ENSG00000101901.12	ENST00000623189.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	34.2928563989645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATTTTATGTTGTGC	150	False	NA	17	True	AATAAA	-23	NA	111681812	111688132	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681827_111682235_111682295_111684964_111685104_111687886
transcript_98167.known	chrX	+	693	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	34.1787580230763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGGAAATTTTATGTT	-12	True	NA	13	True	AATAAA	-19	NA	111681188	111688128	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
transcript_98168.known	chrX	-	1559	4	FSM	ENSG00000182508.14	ENST00000371968.8	1559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTCTGCTAGATACT	-7	True	NA	NA	False	AATAAA	-26	NA	112679938	112630647	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_112631602_112660626_112660726_112671008_112671405_112679828
transcript_9817.known	chr1	-	3003	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	76.4299350493288	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAAAGTTACAGAGA	-27	True	NA	-4	True	AATAAA	-26	NA	224330189	224227336	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_98175.known	chrX	-	347561	2	FSM	ENSG00000241743.4	ENST00000674361.1	347561	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTTTGTTGGTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	113991976	113616299	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_113963600_113991715
transcript_98178.nnic	chrX	+	1189	4	NNC	ENSG00000288595.1	novel	503	3	NA	NA	-43	2414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	45.7553882680013	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	NA	False	NA	12	True	AATAAA	-15	NA	114040344	114058192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_114040637_114042335_114042534_114055650_114056008_114057850
transcript_98181.nnic	chrX	+	1725	4	NNC	ENSG00000288595.1	novel	503	3	NA	NA	-43	2414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	45.7553882680013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	NA	False	NA	12	True	AATAAA	-15	NA	114040344	114058192	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_114040637_114042335_114042534_114055650_114056549_114057855
transcript_98182.known	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	42	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	0	True	NA	3	True	AATAAA	-18	NA	114040387	114050858	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_114040637_114042335_114042534_114050494
transcript_98183.known	chrX	+	503	3	FSM	ENSG00000288595.1	ENST00000674440.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	47.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAACTATTGCAGAA	72	False	NA	NA	False	NA	NA	NA	114040459	114055778	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_114040637_114042335_114042534_114055650
transcript_98184.nic	chrX	+	3570	2	ISM	ENSG00000288595.1	ENST00000674257.1	811	3	-43	5245	-43	-5245	5prime_fragment	FALSE	canonical	3	99	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTTAAAATACTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	114040344	114045613	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_114040637_114042335
transcript_98187.known	chrX	-	4953	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_17	6.60378679243962	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTGGTATTTCTTT	-2	True	NA	NA	False	GATAAA	-15	NA	115234096	115110615	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
transcript_98191.known	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	1769	junction_8	166.852296624556	609	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	-9	True	NA	23	True	AGTAAA	-25	NA	115561173	115650861	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
transcript_98196.known	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	-1	True	NA	NA	False	NA	NA	NA	115841009	115843050	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_115841079_115842839
transcript_98197.known	chrX	+	444	3	FSM	ENSG00000229335.2	ENST00000451869.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTATGTGTTCTTAT	65	False	NA	NA	False	NA	NA	NA	115840963	115843048	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_115841079_115842643_115842764_115842839
transcript_98198.known	chrX	-	3322	7	FSM	ENSG00000003096.14	ENST00000545703.5	3322	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	7.16472842006823	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCTGAGACATCCC	NA	False	NA	-20	True	AATAAA	-14	NA	118116865	117897813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118116507
transcript_9820.known	chr1	-	2897	23	FSM	ENSG00000143748.18	ENST00000281701.11	2897	23	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	43.6341145253714	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACTATACAGAAAAGT	-10	True	NA	-12	True	AATAAA	-43	NA	224330172	224227344	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_98200.known	chrX	+	4114	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_4	22.1414490788887	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	-19	True	NA	30	True	ATTAAA	-40	NA	118346105	118449961	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_98203.known	chrX	+	3996	11	FSM	ENSG00000131724.11	ENST00000371666.8	3996	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	15.577226967596	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGTTTTCCTTTGGT	3	True	NA	9	True	AATAAA	-21	NA	118727605	118794533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118791761
transcript_98204.known	chrX	+	2197	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.471404520791032	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTAATGTGTCTGTG	-1	True	NA	13	True	AATAAA	-15	NA	118823823	118826968	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
transcript_98205.known	chrX	+	1879	3	FSM	ENSG00000101856.10	ENST00000217971.8	1879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_1	55	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGACTTATTTAA	2	True	NA	16	True	AATAAA	-18	NA	119236284	119244466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119236692_119240308_119240465_119243150
transcript_98212.known	chrX	+	1307	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	5365	junction_3	274.699027219893	3674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACATTTTTAATAAATG	0	True	NA	-32	True	AATAAA	-19	NA	119468443	119471396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
transcript_98216.known	chrX	-	1874	2	FSM	ENSG00000224281.5	ENST00000446986.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTACTATTTTTGCA	1531	False	NA	0	True	AATAAA	-13	NA	119468262	119466033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119467751_119468105
transcript_9822.known	chr1	-	2832	22	FSM	ENSG00000143748.18	ENST00000391875.6	2832	22	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_21	30.3118336006885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-8	True	NA	-1	True	AATAAA	-29	NA	224330170	224227333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
transcript_98221.nnic	chrX	-	1257	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6238090226619	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-10	True	ATTAAA	-17	NA	119565447	119538148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538458_119539539_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_98222.nnic	chrX	-	1324	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6238090226619	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-10	True	ATTAAA	-17	NA	119565447	119538148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538495_119539509_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_98223.nnic	chrX	-	1270	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6238090226619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-10	True	ATTAAA	-17	NA	119565447	119538148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538500_119539568_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_98225.nnic	chrX	-	1309	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6238090226619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-10	True	ATTAAA	-17	NA	119565447	119538148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538509_119539538_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_98226.nnic	chrX	-	1012	7	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.1223732018408	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-10	True	ATTAAA	-17	NA	119565447	119538148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119538505_119541369_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_98227.known	chrX	-	2372	7	FSM	ENSG00000018610.15	ENST00000320339.8	2372	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	24.4040069569642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	16	True	NA	-10	True	ATTAAA	-17	NA	119565373	119538148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565124
transcript_98228.known	chrX	-	2301	7	FSM	ENSG00000018610.15	ENST00000644802.2	2301	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	5.20949986936259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	-20	True	NA	-10	True	ATTAAA	-17	NA	119565409	119538148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_98230.known	chrX	+	1771	6	FSM	ENSG00000077721.16	ENST00000630695.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	239.921320436513	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGTATCTTTTTTTTT	-1	True	NA	19	True	AATAAA	-21	NA	119574562	119584425	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119574756_119574907_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
transcript_98231.known	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	28.5979020209525	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	-5	True	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_98232.known	chrX	-	1576	10	FSM	ENSG00000125354.24	ENST00000354228.8	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	45.3945664883658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCTAAAGGAGAAGACT	25	False	NA	NA	False	NA	NA	NA	119693370	119616711	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_98233.known	chrX	-	2693	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	48.6828993729628	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTTTGATGTT	25	False	NA	NA	False	NA	NA	NA	119693370	119617638	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_98235.known	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49.2832578689035	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	25	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_98239.nnic	chrX	-	441	3	NNC	ENSG00000198918.8	novel	390	3	NA	NA	-54	17387	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	5060	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACTGTGGGTAAGTTTG	195	False	NA	NA	False	AATAAA	-18	NA	119791684	119769116	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119769343_119789907_119790012_119791573
transcript_98240.nnic	chrX	-	721	3	NNC	ENSG00000198918.8	novel	390	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	171	junction_2	5727.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	303	False	NA	-10	True	AATAAA	-23	NA	119791576	119786503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_119786733_119789907_119790012_119791188
transcript_98241.known	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	10123	junction_2	751.5	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	-1	True	NA	-10	True	AATAAA	-23	NA	119791630	119786503	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119786733_119789907_119790012_119791573
transcript_98242.known	chrX	-	1915	2	FSM	ENSG00000198918.8	ENST00000468844.1	1915	2	0	0	0	0	multi-exon	FALSE	canonical	3	11626	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGTTGTATTGTGGT	2	True	NA	-12	True	AATAAA	-21	NA	119791595	119786505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119786733_119789907
transcript_98243.known	chrX	-	2343	11	FSM	ENSG00000125351.13	ENST00000276201.7	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	96.1846661375918	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGTTTATTAACT	23	True	NA	-5	True	AATAAA	-24	NA	119852963	119834021	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119840645_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98245.known	chrX	-	2335	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	34.4978081250403	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTAAGTGTGTTTATT	-12	True	NA	-9	True	AATAAA	-20	NA	119852998	119834025	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98251.nic	chrX	-	1283	9	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-85	3866	-85	374	5prime_fragment	FALSE	canonical	3	216	junction_2	35.8817502360183	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAATGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119853083	119837891	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98254.nic	chrX	-	1104	8	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-181	4456	-181	-216	5prime_fragment	FALSE	canonical	3	216	junction_1	37.5412698077131	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAGCCAAGAAATTG	NA	False	NA	NA	False	AAAAAG	-25	NA	119853179	119838481	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98255.nic	chrX	-	909	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-32	7050	-32	-2810	5prime_fragment	FALSE	canonical	3	230	junction_2	35.4326434551844	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAGAATGTTGAAACTG	NA	False	NA	0	True	ATTAAA	-20	NA	119853030	119841075	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98256.nic	chrX	-	831	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-31	7127	-31	-2887	5prime_fragment	FALSE	canonical	3	230	junction_2	35.4326434551844	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGATATAGAAAAGCTA	NA	False	NA	15	True	NA	NA	NA	119853029	119841152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98257.nic	chrX	-	770	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-33	7190	-33	-2950	5prime_fragment	FALSE	canonical	3	230	junction_2	35.4326434551844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAAAGACAAAGA	NA	False	NA	-48	True	AAGAAA	-28	NA	119853031	119841215	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98260.nic	chrX	-	673	5	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-37	9179	-37	-4939	5prime_fragment	FALSE	canonical	3	240	junction_1	30.4302481094059	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAATTAATAGGTAAGT	NA	False	NA	NA	False	AATAGA	-10	NA	119853035	119843204	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_98261.known	chrX	-	1259	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCCTGGATTAAAAGC	-18	True	NA	51	True	NA	NA	NA	119871733	119870474	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119870500_119871700
transcript_98262.known	chrX	+	421	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	2679	junction_2	50	1506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	-26	True	NA	6	True	AATAAA	-17	NA	119871831	119876662	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119872014_119873303_119873394_119876513
transcript_98263.known	chrX	-	1394	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	57.0831356444265	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATTGATATAACTTTA	6	True	NA	-22	True	AATAAA	-5	NA	119943604	119925069	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
transcript_98264.known	chrX	+	921	7	FSM	ENSG00000186471.13	ENST00000371431.8	921	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.685557397916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTGTATTTTTTTGCA	-5	True	NA	NA	False	AATAAA	-15	NA	119895892	119920716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119895988_119896154_119896268_119903213_119903393_119903494_119903587_119914698_119914879_119919910_119919964_119920507
transcript_98265.nic	chrX	-	895	5	ISM	ENSG00000101882.10	ENST00000371410.5	5942	9	-36	13846	-36	-4393	5prime_fragment	FALSE	canonical	3	138	junction_2	4.06201920231798	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAGAAGAAACACA	-24	True	NA	-25	True	AAGAAA	-12	NA	119943787	119934517	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119934558_119936296_119936432_119936611_119936683_119938729_119938811_119943219
transcript_98266.nic	chrX	-	768	4	ISM	ENSG00000101882.10	ENST00000371410.5	5942	9	-36	15712	-36	-6259	5prime_fragment	FALSE	canonical	3	138	junction_1	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAGAAAAAATCATCG	-24	True	NA	NA	False	AAAAAG	-38	NA	119943787	119936383	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119936432_119936611_119936683_119938729_119938811_119943219
transcript_98267.known	chrX	+	412	3	FSM	ENSG00000186471.13	ENST00000371422.5	412	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTTTGAAGTCTGG	7	True	NA	NA	False	AATAAA	-15	NA	119896192	119903652	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_119896268_119903213_119903393_119903494
transcript_98268.nic	chrX	-	720	3	ISM	ENSG00000101882.10	ENST00000652253.1	1394	9	-183	11542	-36	-6487	5prime_fragment	FALSE	canonical	3	140	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTTTAAAAAAAGGGTA	-24	True	NA	0	True	AAGAAA	-29	NA	119943787	119936611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_119936683_119938729_119938811_119943219
transcript_98269.nnic	chrX	+	1580	3	FSM	ENSG00000258545.7	ENST00000687648.1	1536	3	-45	1	-45	0	multi-exon	FALSE	canonical	3	15	junction_1	6	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTCTCTGATTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	120140664	120146854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_120140850_120143722_120143901_120145637
transcript_98270.known	chrX	-	2384	3	FSM	ENSG00000233382.8	ENST00000452254.3	2424	3	40	0	10	0	multi-exon	FALSE	canonical	3	13	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTGCACTGACTT	-14	True	NA	NA	False	AATAAA	-14	NA	120245233	120236457	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120238243_120240226_120240356_120244763
transcript_98273.known	chrX	+	5211	2	FSM	ENSG00000177485.7	ENST00000326624.2	5211	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	31	False	NA	15	True	AATAAA	-16	NA	120250751	120258398	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_120250978_120253413
transcript_98275.known	chrX	-	3350	9	FSM	ENSG00000125355.16	ENST00000371369.9	3350	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.81735691739616	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTGTGTCAAGGTAGC	-1	True	NA	0	True	AATAAA	-19	NA	120311461	120258649	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120261029_120268243_120268388_120276884_120277048_120285126_120285216_120287153_120287223_120291250_120291341_120293988_120294052_120304348_120304492_120311251
transcript_98276.known	chrX	-	6535	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	88.5744743139918	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATAACCTCATTTTT	-3	True	NA	-2	True	AATAAA	-20	NA	120469296	120426147	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_98279.known	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	75.3027223943464	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	12	False	NA	-3	True	AATAAA	-24	NA	120469306	120436493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_9828.nic	chr1	-	755	7	ISM	ENSG00000143748.18	ENST00000467882.5	1310	12	-57	15412	-5	-10	5prime_fragment	FALSE	canonical	3	234	junction_1	57.7946556544999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAGAAGATCTTCAG	-32	False	NA	NA	False	AATAAA	-11	NA	224330194	224305093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_98284.known	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	47	junction_20	35.2707740204266	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	7	True	NA	-10	True	AATAAA	-18	NA	120561453	120524611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
transcript_98289.known	chrX	-	4418	20	FSM	ENSG00000158290.19	ENST00000371323.3	4418	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	24	junction_19	40.0387623819068	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	-1	True	NA	-10	True	AATAAA	-18	NA	120559915	120524611	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120559778
transcript_9829.known	chr1	-	692	5	FSM	ENSG00000143748.18	ENST00000489194.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.977717608773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	7320	False	NA	-1	True	AATAAA	-29	NA	224268133	224227333	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224227671_224231225_224231297_224236505_224236583_224250211_224250319_224268033
transcript_98290.known	chrX	-	5097	20	FSM	ENSG00000158290.19	ENST00000674137.11	5097	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	16	junction_6	41.8317431724056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCCTGTGTACGTG	6	True	NA	-71	True	NA	NA	NA	120560953	120524672	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538117_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
transcript_98299.known	chrX	+	9577	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	21.3597752797168	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTGTCTTTACTT	-21	True	NA	NA	False	AATAAA	-19	NA	120604100	120621159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
transcript_98301.known	chrX	-	1636	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTGAGAAAAAAAACTGA	-7	True	NA	-19	True	ATTAAA	-18	NA	120630054	120625673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_120627172_120629916
transcript_98305.nnic	chrX	+	847	5	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	36.9484438102608	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGTGTATTATTTG	NA	False	NA	17	True	AGTAAA	-19	NA	122222339	122248544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chrX_+_122222603_122227324_122227431_122229771_122229895_122230631_122230758_122248315
transcript_98306.nnic	chrX	+	793	5	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_4	32.7604945017623	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGTGTATTATTTG	NA	False	NA	17	True	AGTAAA	-19	NA	122222339	122248544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122248315
transcript_98307.nnic	chrX	+	3584	5	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	44.5722727713093	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGGTGTCTTGTTTT	NA	False	NA	8	True	AATAAA	-20	NA	122222415	122257837	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Intergenic_chrX_+_122222603_122227324_122227431_122229825_122229895_122254358_122254508_122254764
transcript_98311.known	chrX	+	609	1	FSM	ENSG00000280142.1	ENST00000624911.1	609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACTTATTGCCCTTGT	2820	False	NA	NA	False	AATAAA	-22	NA	122242007	122242616	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_122242000_122242600
transcript_98312.nnic	chrX	+	1006	5	NNC	ENSG00000125675.20	novel	784	5	NA	NA	-227	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	12.1449578014911	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	340	False	NA	24	True	AATAAA	-24	NA	123183925	123204683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_123184215_123184517_123184645_123185831_123185991_123202635_123202783_123204399
transcript_98313.known	chrX	+	644	3	FSM	ENSG00000125675.20	ENST00000479118.1	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTAATTTTAGAACC	0	True	NA	58	True	AATAAA	-27	NA	123184559	123253702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123184645_123185831_123185991_123253302
transcript_98314.known	chrX	+	784	5	FSM	ENSG00000125675.20	ENST00000616590.4	784	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	12.4197423483742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	209	False	NA	24	True	AATAAA	-24	NA	123184152	123204683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123184220_123184517_123184645_123185831_123185991_123202635_123202783_123204399
transcript_98315.known	chrX	-	5600	39	FSM	ENSG00000125676.20	ENST00000245838.13	5600	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.322160359148	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATATTATTGTGTA	-10	True	NA	-9	True	AATAAA	-17	NA	123733052	123600568	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_123601339_123610917_123610964_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_98317.nic	chrX	-	3916	31	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-32	11325	-32	0	5prime_fragment	FALSE	canonical	0	0	junction_10	62.815567780253	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCAGCTACTACTCCA	NA	False	NA	NA	False	AAAAAG	-31	NA	123733088	123621522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_9832.known	chr1	+	912	5	FSM	ENSG00000143771.12	ENST00000366860.9	912	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	1898.5658403121	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGATTTCTAGTTC	-7	True	NA	45	True	TATAAA	-24	NA	224356886	224375998	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224356994_224364108_224364456_224365878_224365992_224371282_224371424_224375794
transcript_98322.nnic	chrX	-	2835	23	NNC	ENSG00000125676.20	novel	4930	39	NA	NA	-32	-4180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.1404784478301	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTTTGTTCTAGTAG	NA	False	NA	-1	True	AATAAA	-43	NA	123733088	123627692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640525_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_98324.nic	chrX	-	2823	23	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-32	17495	-32	-4180	5prime_fragment	FALSE	canonical	0	0	junction_2	71.6452030771561	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTTTGTTCTAGTAG	NA	False	NA	-1	True	AATAAA	-43	NA	123733088	123627692	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_98331.nic	chrX	-	1935	18	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-32	27897	-32	-14582	5prime_fragment	FALSE	canonical	3	274	junction_12	33.7164032445761	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGAATGAAACA	NA	False	NA	NA	False	NA	NA	NA	123733088	123638094	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_98333.known	chrX	-	876	10	FSM	ENSG00000125676.20	ENST00000433883.1	876	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	105.793066122058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTGATAATTGCATTATG	5	True	NA	-108	True	NA	NA	NA	123733037	123668307	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696836_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_98335.known	chrX	-	689	3	FSM	ENSG00000125676.20	ENST00000459945.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCAGCTACTACTCCA	NA	False	NA	NA	False	AAAAAG	-31	NA	123623625	123621522	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_123621588_123622757_123622861_123623104
transcript_98344.known	chrX	+	5991	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	59.3044893826555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	-28	True	NA	NA	False	AATAAA	-22	NA	123961717	124102656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_98354.nnic	chrX	+	4600	23	NNC	ENSG00000101972.20	novel	5745	32	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.2481887060975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTATGTTTTCTCTTGT	-44	True	NA	14	True	AATAAA	-16	NA	123961701	124102499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_123961857_124022530_124022574_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_98359.known	chrX	+	6179	35	FSM	ENSG00000101972.20	ENST00000371145.8	6179	35	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	83.4678988498471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	-40	True	NA	NA	False	AATAAA	-22	NA	123961705	124102656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
transcript_98361.nic	chrX	+	1086	9	ISM	ENSG00000101972.20	ENST00000691383.1	2400	18	-16	14529	-4	-779	5prime_fragment	FALSE	canonical	3	89	junction_1	68.081637575781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAATAGAAAATATGAT	-44	True	NA	NA	False	AAGAAA	-34	NA	123961701	124049019	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004
transcript_98368.known	chrX	-	326	2	FSM	ENSG00000232412.1	ENST00000426367.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCGTTTCTGTTCCATT	1865	False	NA	2	True	CATAAA	-19	NA	123961341	123959232	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_123959406_123961188
transcript_98372.nnic	chrX	-	4065	25	NIC	ENSG00000102038.16	novel	4099	25	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	92	junction_1	120.478206593097	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCCTGTTTTTTTGTG	-4	True	NA	NA	False	AATAAA	-23	NA	129523493	129446500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_129447302_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_98374.known	chrX	-	3989	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_13	76.0264482488386	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	-1	True	NA	NA	False	AATAAA	-18	NA	129523490	129446505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_98376.known	chrX	-	4099	25	FSM	ENSG00000102038.16	ENST00000371122.8	4099	25	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	132.898352970314	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTATTTCCTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	129523500	129446504	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_129447302_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_98377.nnic	chrX	-	3890	25	NIC	ENSG00000102038.16	novel	4099	25	NA	NA	-75	-252	combination_of_known_splicesites	FALSE	canonical	3	92	junction_1	120.478206593097	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTTCACTTCTTTGTT	NA	False	NA	-22	True	ATTAAA	-17	NA	129523575	129446757	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_129447302_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_98379.known	chrX	-	3948	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_12	117.696447211462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	4	True	NA	NA	False	AATAAA	-18	NA	129523485	129446505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_9838.known	chr1	+	1525	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1806.96731815738	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGTTTGTGGTTTAAT	-6	True	NA	11	True	AATAAA	-19	NA	224356887	224376884	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
transcript_98383.nic	chrX	-	3249	24	ISM	ENSG00000102038.16	ENST00000371122.8	4099	25	-11	1861	-11	-1860	5prime_fragment	FALSE	canonical	3	409	junction_12	76.2480034756745	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAAACGGGCAAC	NA	False	NA	4	True	AAGAAA	-30	NA	129523511	129448365	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_98384.nic	chrX	-	2746	20	ISM	ENSG00000102038.16	ENST00000371122.8	4099	25	-75	24723	-75	-24722	5prime_fragment	FALSE	canonical	3	409	junction_8	76.9048049894863	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAAACTTCTCAC	NA	False	NA	-7	True	AAAAAG	-40	NA	129523575	129471227	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_98390.nic	chrX	-	1437	10	ISM	ENSG00000102038.16	ENST00000371122.8	4099	25	-75	53272	-75	8278	5prime_fragment	FALSE	canonical	3	472	junction_5	54.4544208546678	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAAGATTTACTTGG	NA	False	NA	NA	False	TATAAA	-34	NA	129523575	129499776	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_98393.known	chrX	-	4571	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.6872395308647	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCATTTCTTTAC	378	False	129843910	-19	True	AATACA	-21	NA	129843886	129803287	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
transcript_984.known	chr1	-	1045	9	FSM	ENSG00000117122.14	ENST00000375535.4	1045	9	0	0	0	0	multi-exon	FALSE	canonical	3	4186	junction_8	418.305790510961	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	14	True	NA	NA	False	ATTAAA	-18	NA	16980620	16974501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586
transcript_98404.known	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	22.582275874532	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	-9	True	NA	9	True	AATAAA	-17	NA	129906163	129929752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
transcript_98407.known	chrX	-	2107	16	FSM	ENSG00000156709.15	ENST00000675240.1	2107	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	133.736058463428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGAAATAAATTCTGA	7555	False	NA	NA	False	NA	NA	NA	130165825	130129396	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130129629_130129969_130130103_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_98409.known	chrX	-	2061	16	FSM	ENSG00000156709.15	ENST00000416073.7	2061	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	183.363100613691	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTTCTCTTGTCAA	-1	True	NA	NA	False	AATAAA	-19	NA	130165693	130129364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133452_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147871_130149468_130149569_130156460_130156604_130165550
transcript_9841.known	chr1	+	808	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	1612.38929852564	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-1	True	NA	NA	False	AATAAA	-24	NA	224356892	224379452	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
transcript_98414.known	chrX	+	945	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	18	True	NA	4	True	AATAAA	-15	NA	130171961	130184870	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130172321_130184284
transcript_98415.known	chrX	-	4638	19	FSM	ENSG00000056277.16	ENST00000370978.9	4638	19	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_7	18.773503787105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAACTATAGGAGCAT	0	True	NA	33	True	AATAAA	-20	NA	130268899	130202706	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
transcript_98416.nic	chrX	-	1654	10	ISM	ENSG00000056277.16	ENST00000447817.1	1970	14	-17	13432	-1	-13432	5prime_fragment	FALSE	canonical	3	86	junction_1	16.6984881403329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGTAGAAGAAAAAA	-1	True	NA	NA	False	NA	NA	NA	130268900	130228624	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
transcript_98421.known	chrX	+	1615	11	FSM	ENSG00000102078.16	ENST00000545805.6	1615	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32.2411228092323	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	11	True	NA	8	True	ATTAAA	-17	NA	130339918	130373357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130339977_130340106_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_98427.nnic	chrX	+	1064	7	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	28.9985631827969	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	-13	True	NA	8	True	ATTAAA	-17	NA	130339894	130373357	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_130339977_130349250_130349346_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_98430.known	chrX	+	1403	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	21.6076118275225	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTGTCTTCATTTA	-20	True	NA	12	True	ATTAAA	-21	NA	130339887	130373361	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_98431.known	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	33.38622470421	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	-5	True	NA	14	True	CATAAA	-16	NA	130401986	130413656	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
transcript_98432.nic	chrX	+	594	5	ISM	ENSG00000134597.17	ENST00000305536.11	1823	6	-68	2132	-68	0	5prime_fragment	FALSE	canonical	3	139	junction_1	15.6744218394172	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	NA	False	NA	2	True	AAAAAG	-10	NA	130401918	130411524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347
transcript_98434.known	chrX	-	5215	16	FSM	ENSG00000165675.19	ENST00000338144.8	5215	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	16.2234398325386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	-7	True	NA	74	True	AATAAA	-21	NA	130903209	130622324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130709242_130709332_130783546_130783691_130901683_130901732_130903048
transcript_98435.known	chrX	-	5126	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	8.8456146173787	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	-7	True	NA	74	True	AATAAA	-21	NA	130903209	130622324	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_98437.known	chrX	-	3963	14	FSM	ENSG00000165675.19	ENST00000370935.5	3963	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_12	14.0796550522565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAACTCCTTACCAT	8	True	NA	NA	False	AATAAA	-7	NA	130903234	130623368	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130901683_130901732_130903048
transcript_98439.nic	chrX	-	1779	12	ISM	ENSG00000165675.19	ENST00000394363.6	5126	15	-45	12735	-20	-11146	5prime_fragment	FALSE	canonical	3	39	junction_3	9.87190688036235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAGCTGAACTTGAAA	-12	True	NA	NA	False	AATACA	-5	NA	130903254	130635059	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_9844.known	chr1	+	968	3	FSM	ENSG00000143786.8	ENST00000483512.5	968	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTTTGGTTGGAACTC	37	False	NA	NA	False	NA	NA	NA	224434911	224521555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224435188_224515740_224515877_224520999
transcript_98443.known	chrX	+	2447	9	FSM	ENSG00000147256.12	ENST00000370921.1	2447	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.86664806538351	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATGGCTTACTGTGTT	0	True	NA	NA	False	AATAAA	-23	NA	131083709	131089883	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_131083970_131084214_131084408_131084625_131084682_131084913_131085065_131085587_131085737_131085912_131086090_131086328_131086427_131086558_131086666_131088627
transcript_98444.known	chrX	-	4461	20	FSM	ENSG00000147255.19	ENST00000361420.8	4461	20	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_14	36.1070277303955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGTGGTCTTCTAT	-16	True	NA	-2	True	AATAAA	-29	NA	131289306	131273505	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_9845.known	chr1	-	7367	14	FSM	ENSG00000162923.17	ENST00000414423.9	7367	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	21.2689177887669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTGGTGTGTTACAT	-11	True	NA	NA	False	AATAAA	-18	NA	224434797	224385145	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431476_224431582_224431681_224431782_224433683
transcript_98451.known	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	15.5402702679201	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	4	True	NA	0	True	AATAAA	-14	NA	131289286	131284165	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_98457.known	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131825366_131830291
transcript_98458.known	chrX	-	699	1	FSM	ENSG00000213468.7	ENST00000658060.1	699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAGCACTCAAATATACA	-20	True	NA	NA	False	AATAGA	-31	NA	131830622	131829923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_131829900_131830600
transcript_9846.known	chr1	-	6502	14	FSM	ENSG00000162923.17	ENST00000651911.2	6502	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	20.3513516699235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATACCTAAATAATT	3038	False	NA	NA	False	AATAAA	-3	NA	224433995	224385160	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431524_224431582_224431681_224431782_224433683
transcript_98460.known	chrX	+	1835	13	FSM	ENSG00000134602.16	ENST00000481105.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	182.498915521892	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATCTTTAGTTGACTC	-1	True	NA	NA	False	NA	NA	NA	132023301	132074461	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132055455_132055522_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_98464.known	chrX	+	3251	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_7	40.5067079436203	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	-1	True	NA	17	True	AATAAA	-19	NA	132023301	132075943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_98467.known	chrX	+	3179	11	FSM	ENSG00000134602.16	ENST00000354719.10	3179	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	147.975673676453	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	-1	True	NA	17	True	AATAAA	-19	NA	132023301	132075943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072965_132073094_132074134
transcript_98468.nic	chrX	+	3163	11	NIC	ENSG00000134602.16	novel	3251	12	NA	NA	-98	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_6	151.383486549888	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	419	False	NA	17	True	AATAAA	-19	NA	132023203	132075943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_98470.known	chrX	+	3017	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	141.614264818203	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	2	True	NA	17	True	AATAAA	-19	NA	132023304	132075943	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_98473.known	chrX	-	11263	8	FSM	ENSG00000076770.15	ENST00000394311.6	11263	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	4.89897948556636	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTCAGTCCTTCTC	-2	True	NA	NA	False	AATAAA	-19	NA	132413608	132369316	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_132379678_132382177_132382273_132384662_132384699_132386660_132386812_132390846_132391084_132392142_132392335_132406227_132406393_132413582
transcript_98478.known	chrX	-	2267	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_6	43.5819659389298	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	-7	True	NA	-28	True	AATAAA	-16	NA	133985594	133535744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
transcript_9848.nic	chr1	+	1165	8	NIC	ENSG00000185842.16	novel	2215	11	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	78.8504137915715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	NA	False	NA	16	True	AATAAA	-16	NA	224929597	224969829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967515_224968758_224968875_224969633
transcript_98480.known	chrX	+	4434	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	99.0668965901325	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTCTTTTTTGTG	-15	True	NA	18	True	AATAAA	-18	NA	134373311	134428791	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
transcript_98481.known	chrX	+	4759	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	52.0536285662544	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	-15	True	NA	16	True	AATAAA	-16	NA	134373311	134428789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
transcript_98482.known	chrX	+	1150	8	FSM	ENSG00000156531.18	ENST00000370800.4	1150	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	108.567293154325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTCTATGTAACTT	-7	True	NA	NA	False	AATAAA	-21	NA	134373372	134415292	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015
transcript_98483.nic	chrX	+	698	6	ISM	ENSG00000156531.18	ENST00000691812.1	3892	11	-39	15224	0	-1748	5prime_fragment	FALSE	canonical	3	240	junction_5	64.5259637665336	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAAGAAAAGTCGCAAA	0	True	NA	NA	False	AAGAAA	-40	NA	134373287	134413544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490
transcript_98487.known	chrX	+	1395	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_7	27.1750689971525	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	7	True	NA	23	True	AATAAA	-16	NA	134460164	134500668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
transcript_9849.nic	chr1	+	1234	8	NIC	ENSG00000185842.16	novel	1984	11	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_6	63.0484102957111	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	NA	False	NA	16	True	AATAAA	-16	NA	224929597	224969829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969633
transcript_98491.known	chrX	-	991	2	FSM	ENSG00000223749.11	ENST00000666697.1	991	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCTGCAGTGCAAATTG	4599	False	NA	NA	False	ATTAAA	-15	NA	134545044	134543339	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134544000_134544713
transcript_98492.known	chrX	-	1078	11	FSM	ENSG00000156504.17	ENST00000493333.5	1078	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	54.3975183257472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCAGAGAACTTTGATCC	3	True	NA	NA	False	CATAAA	-14	NA	134797187	134772078	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_98495.known	chrX	-	1059	11	FSM	ENSG00000156504.17	ENST00000611027.2	1059	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	54.0133316876491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAAAATGTTTAGTGG	3	True	NA	NA	False	NA	NA	NA	134797187	134772100	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_98500.nic	chrX	-	1579	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	-65	-60	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	50.841802573167	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAGTACATTATTTTG	NA	False	NA	-14	True	ATTAAA	-20	NA	134797297	134771633	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_98507.known	chrX	+	2063	4	FSM	ENSG00000156500.16	ENST00000623326.4	2063	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	15.1070255914995	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTGGGCATGATGGTAC	-9	True	NA	NA	False	AATACA	-7	NA	134807190	134822990	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134807342_134807539_134807709_134814770_134814850_134821326
transcript_98509.known	chrX	-	4377	10	FSM	ENSG00000156504.17	ENST00000343004.10	4377	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	48.1663783151692	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	-15	True	NA	-17	True	AATAAA	-25	NA	134797205	134769565	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107
transcript_9851.nnic	chr1	+	1163	8	NNC	ENSG00000185842.16	novel	13763	84	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	89.8234095208993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	-24	True	NA	16	True	AATAAA	-16	NA	224929653	224969829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_+_224929836_224952684_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969633
transcript_98517.known	chrX	-	2348	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	44.7910705386687	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	-9	True	NA	-23	True	AATAAA	-18	NA	134915257	134887631	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_98518.known	chrX	+	1483	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGCATTTAGAATGAA	-10	True	NA	NA	False	ATTAAA	-21	NA	134990990	134992473	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_134991000_134992500
transcript_98519.known	chrX	-	2030	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAAGTTTTAGTCTT	-33	True	NA	-14	True	ATTAAA	-20	NA	135022542	135020512	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135020500_135022500
transcript_9852.known	chr1	+	1103	7	FSM	ENSG00000185842.16	ENST00000366850.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	43.9143737541847	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTCAGAAACTTTAT	-17	True	NA	8	True	AATAAA	-23	NA	224929660	224967923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
transcript_98520.known	chrX	+	616	2	FSM	ENSG00000134590.14	ENST00000464369.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	26	False	NA	NA	False	AATAAA	-24	NA	135032381	135033546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_135032576_135033124
transcript_98521.known	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	-1	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_135032400_135033500
transcript_98522.known	chrX	-	536	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCTGATGGGTGCC	15	True	NA	NA	False	NA	NA	NA	135052141	135051057	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135051369_135051916
transcript_98523.known	chrX	-	817	2	FSM	ENSG00000203950.7	ENST00000520964.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATGGAGTCTCAAT	-40	True	NA	-76	True	AATAAA	-16	NA	135052196	135050939	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135051477_135051916
transcript_98524.known	chrX	-	1204	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	21	True	NA	-68	True	AATAAA	-24	NA	135052135	135050931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135050900_135052100
transcript_98525.known	chrX	-	762	2	FSM	ENSG00000203950.7	ENST00000518153.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	66	False	NA	-68	True	AATAAA	-24	NA	135052090	135050931	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135051520_135051916
transcript_98527.known	chrX	-	5611	7	FSM	ENSG00000186376.15	ENST00000370766.8	5611	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	8.91471941354422	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGAAATGGCCAATGTTT	5	True	NA	-3	True	AATAAA	-22	NA	135344109	135285790	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135287847_135291008_135291136_135291471_135291564_135292280_135292474_135293729_135294259_135295767_135296040_135341767
transcript_98529.nnic	chrX	-	1632	4	Fusion	ENSG00000236491.1_ENSG00000186376.15	novel	730	6	NA	NA	-13	7161	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGTTAAGATGAGGTC	-8	True	NA	NA	False	NA	NA	NA	135344122	135173093	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	Fusion_chrX_-_135173534_135183624_135183770_135192897_135193083_135343260
transcript_98532.known	chrX	+	4034	5	FSM	ENSG00000173275.13	ENST00000339249.5	4034	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	7.95298686029343	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTAATATTCTTTGTTA	-1	True	NA	NA	False	AATATA	-28	NA	135344795	135363413	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_135344836_135347018_135347473_135349109_135349315_135359891_135360006_135360192
transcript_98535.nic	chrX	+	3809	18	NIC	ENSG00000165359.16	novel	3904	18	NA	NA	-37	0	intron_retention	FALSE	canonical	3	18	junction_15	11.3683224059339	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTGGATAAATTTC	-19	True	NA	15	True	AATAAA	-26	NA	135520621	135582509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135570435_135570547_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577296_135579787_135580163_135581049_135581144_135581527
transcript_98536.known	chrX	+	3793	17	FSM	ENSG00000165359.16	ENST00000370752.4	3793	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	13.4111660566857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTGGATAAATTTC	18	True	NA	15	True	AATAAA	-26	NA	135520658	135582509	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577428_135579787_135580163_135581049_135581144_135581527
transcript_98538.known	chrX	-	5145	4	FSM	ENSG00000169446.6	ENST00000305963.3	5145	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	7.40870359029762	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTTTTTTTTTCA	19	True	NA	1	True	AATAAA	-21	NA	135973988	135960587	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596
transcript_98540.known	chrX	+	2441	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	22.4276614920058	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTTTTCATTCTGC	15	False	NA	23	True	AATAAA	-21	NA	136147464	136211359	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
transcript_98541.known	chrX	-	4385	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	17.3348468000224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTTTTTTCATTATAA	-13	True	NA	NA	False	AATAAA	-15	NA	136251400	136216813	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_98544.nic	chrX	-	2224	13	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-51	9103	-51	-3524	5prime_fragment	FALSE	canonical	3	91	junction_2	18.5298183117554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAAGGTACTCGCTCTC	4970	False	NA	-2	True	NA	NA	NA	136251451	136225916	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_98545.nic	chrX	-	2081	12	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-51	10516	-51	3055	5prime_fragment	FALSE	canonical	3	91	junction_1	17.5729882875785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAAGGATGGCTGGATC	4970	False	NA	NA	False	ACTAAA	-3	NA	136251451	136227329	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_98546.nic	chrX	-	1933	11	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-51	11855	-51	1716	5prime_fragment	FALSE	canonical	3	103	junction_1	14.6017122283655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAGGAAGAAGAA	4970	False	NA	NA	False	NA	NA	NA	136251451	136228668	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_98547.nic	chrX	-	1779	10	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-51	13635	-51	-64	5prime_fragment	FALSE	canonical	3	107	junction_4	12.5648932828686	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGTTTCTAAAACCAC	4970	False	NA	NA	False	AAAAAG	-7	NA	136251451	136230448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_9855.nic	chr1	+	2353	7	NIC	ENSG00000185842.16	novel	13763	84	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_6	52.7870459698421	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	-24	True	NA	16	True	AATAAA	-16	NA	224929653	224969829	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224968875_224969633
transcript_98550.nic	chrX	-	388	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-18	25076	0	-14318	5prime_fragment	FALSE	canonical	3	137	junction_2	7.31816613336672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAGAAAGAAGAACAA	-13	True	NA	-72	True	AAAACA	-33	NA	136251400	136244702	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_98551.nic	chrX	-	375	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-69	25140	-51	-14382	5prime_fragment	FALSE	canonical	3	137	junction_2	7.31816613336672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGACCAAGCTCCA	4970	False	NA	NA	False	AATAAA	-22	NA	136251451	136244766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_98553.known	chrX	+	3019	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	0	0	0	0	multi-exon	TRUE	canonical	3	292	junction_1	161.590551001101	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	147	False	NA	38	True	AATAAA	-27	NA	136497078	136512342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_98554.known	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	82.7673697781922	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	-3	True	NA	42	True	AATAAA	-31	NA	136497591	136512346	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_98558.nic	chrX	+	1478	5	ISM	ENSG00000102241.12	ENST00000448450.5	1014	6	306	-586	-65	586	3prime_fragment	FALSE	canonical	3	618	junction_4	106.355535822072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTGATGTCTCATT	145	False	NA	NA	False	ATTAAA	-14	NA	136497526	136503527	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_98560.nic	chrX	-	3586	11	NIC	ENSG00000147274.14	novel	2012	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	858	junction_2	1173.8754661377	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTGTGGCAAGGGG	-2	True	NA	-14	True	AATAAA	-15	NA	136880780	136869191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_136870418_136872267_136872346_136873245_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_98563.nic	chrX	-	2326	10	NIC	ENSG00000147274.14	novel	4887	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	414	junction_2	1326.5698457132	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTGTGGCAAGGGG	0	True	NA	-14	True	AATAAA	-15	NA	136880727	136869191	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_136870418_136872267_136872346_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_98569.known	chrX	-	2012	9	FSM	ENSG00000147274.14	ENST00000320676.11	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	3712	junction_6	187.424609843531	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAGCTGCAAAGGTGC	2	True	NA	-36	True	AATAAA	-19	NA	136880725	136873460	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_98578.known	chrX	-	1852	8	FSM	ENSG00000147274.14	ENST00000464781.5	1852	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	1398.69395348311	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTGCTCTTACTG	2	True	NA	-24	True	AATAAA	-31	NA	136880725	136873448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136879016_136879124_136879318_136879454_136880596
transcript_98580.known	chrX	-	2148	8	FSM	ENSG00000147274.14	ENST00000562646.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	3712	junction_5	199.157101355709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTCGCATTGCTTT	2	True	NA	-10	True	AGTAAA	-16	NA	136880725	136873957	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_98587.known	chrX	-	563	2	FSM	ENSG00000147274.14	ENST00000565907.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	3724	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATTGTCTACACGATG	5	True	NA	NA	False	NA	NA	NA	136880722	136879016	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_136879454_136880596
transcript_98591.known	chrX	-	78	1	FSM	ENSG00000214748.2	ENST00000442158.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCTGCCCCCAAAGCAA	34	False	NA	NA	False	NA	NA	NA	137325049	137324971	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_137325000_137325000
transcript_98592.known	chrX	-	304	3	FSM	ENSG00000224765.2	ENST00000456631.1	304	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTATGGACCTGGAAC	559	False	NA	NA	False	AATAAA	-19	NA	137563925	137556190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_137556305_137561043_137561198_137563889
transcript_98595.known	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	41.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	-2	True	NA	-33	True	AATAAA	-31	NA	137566126	137572102	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_137567752_137568901_137569066_137569890
transcript_98597.known	chrX	+	1968	3	FSM	ENSG00000156925.12	ENST00000370606.3	1968	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	-1	True	NA	13	True	AATAAA	-14	NA	137566517	137577691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_137567752_137568901_137569066_137577121
transcript_98598.known	chrX	+	366	2	FSM	ENSG00000156925.12	ENST00000478471.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTCTGCAGTTCAAAC	55	False	NA	NA	False	AGTAAA	-13	NA	137568804	137569995	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_137569066_137569890
transcript_98602.nic	chrX	+	921	2	ISM	ENSG00000156925.12	ENST00000370606.3	1968	3	2197	0	-90	0	3prime_fragment	FALSE	canonical	3	115	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	1231	False	NA	13	True	AATAAA	-14	NA	137568714	137577691	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_+_137569066_137577121
transcript_98603.known	chrX	-	19575	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	48.5148173241949	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGATCATTGGC	-20	True	NA	-1	True	AATAAA	-25	NA	138711717	138614726	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
transcript_98606.nnic	chrX	+	1424	3	NNC	ENSG00000226031.5	novel	584	4	NA	NA	-284	473	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	4	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGTATTAATCATGTC	NA	False	NA	2	True	ATTAAA	-14	NA	138711822	138717090	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_+_138711961_138714723_138714810_138715890
transcript_98607.known	chrX	+	849	3	FSM	ENSG00000226031.5	ENST00000438238.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	NA	False	NA	NA	False	AAAAAG	-28	NA	138712106	138716617	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_138712143_138714723_138714810_138715890
transcript_98609.known	chrX	+	1497	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-263	0	-263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACCTTATTTATT	NA	False	NA	4	True	AATAAA	-16	NA	140091414	140092911	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_140091400_140092900
transcript_98610.known	chrX	+	1354	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	NA	False	NA	NA	False	AAGAAA	-24	NA	140764497	140773230	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_140764699_140772077
transcript_98612.known	chrX	+	1429	3	FSM	ENSG00000203930.13	ENST00000370535.8	1429	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACCCAGCAACAAAAAC	4	True	NA	NA	False	AATAAA	-15	NA	140709766	140714848	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_140709806_140711620_140711657_140713494
transcript_98613.known	chrX	+	802	3	FSM	ENSG00000203930.13	ENST00000602535.2	802	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGCCAGTGAATCGGG	2	True	NA	16	True	AATAAA	-17	NA	140764561	140772680	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_140764699_140768344_140768407_140772077
transcript_98614.known	chrX	-	784	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	231	False	NA	-16	True	AATAAA	-19	NA	141177016	141175748	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_141176409_141176892
transcript_98615.known	chrX	-	691	2	FSM	ENSG00000198021.7	ENST00000370519.3	691	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGCCTGTTTTCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	141585011	141583673	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_141583960_141584606
transcript_98616.known	chrX	+	408	2	FSM	ENSG00000203926.5	ENST00000370518.4	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	-1	True	NA	NA	False	AATAAA	-15	NA	141589707	141590762	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_141589840_141590486
transcript_98617.known	chrX	-	8736	2	FSM	ENSG00000179542.16	ENST00000356928.2	8736	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAGCCATTCAGTGT	2	True	NA	NA	False	AATAAA	-20	NA	143636101	143622789	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_143631159_143635734
transcript_98618.known	chrX	-	3357	2	FSM	ENSG00000179542.16	ENST00000338017.8	3357	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	899	False	NA	NA	False	NA	NA	NA	143635204	143628127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_143631159_143634878
transcript_98619.known	chrX	+	8421	5	FSM	ENSG00000185985.11	ENST00000335565.6	8421	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.6081867662439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTCATATTTTGGGCT	-7	True	NA	NA	False	AATAGA	-35	NA	145817828	145829856	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_145818027_145820473_145820537_145821347_145821885_145822004_145822154_145822382
transcript_9862.known	chr1	-	3748	14	FSM	ENSG00000143815.15	ENST00000272163.9	3748	14	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	74.3348413535218	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGCCTTTTTTTTTT	22	True	NA	-6	True	AATAAA	-21	NA	225428038	225401501	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_98620.nic	chrX	+	1834	16	FSM	ENSG00000102081.16	ENST00000495717.6	2874	16	62	978	-17	30	multi-exon	FALSE	canonical	3	20	junction_15	59.10946530708	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	-12	True	NA	23	True	AATAAA	-14	NA	147912141	147948534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948412
transcript_98623.known	chrX	+	4271	16	FSM	ENSG00000102081.16	ENST00000440235.6	4271	16	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_13	55.3808631207568	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTGACAGATGTTTGC	-5	True	NA	76	True	ATTAAA	-28	NA	147911950	147951125	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948682
transcript_98626.known	chrX	+	1832	2	FSM	ENSG00000102081.16	ENST00000621447.1	1832	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTGGAGAAGTGTTAC	79	False	NA	NA	False	AATAAA	-18	NA	147912122	147914451	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_147912231_147912727
transcript_98628.known	chrX	-	7580	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	27.7083020049948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGTGTGCAATTCTT	4	True	NA	NA	False	AATAAA	-18	NA	149505306	149476987	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_98631.known	chrX	-	1399	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	51.6096020175332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	-37	False	NA	0	True	AATAAA	-26	NA	149505347	149487130	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_98635.known	chrX	+	1204	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	30.5122926047847	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	10	True	NA	NA	False	AATAAA	-15	NA	149540629	149547309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_98637.nic	chrX	+	1278	5	NIC	ENSG00000197620.11	novel	1204	5	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	35.5949434611154	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149540574	149547309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_149540800_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_98639.nic	chrX	+	1708	5	NIC	ENSG00000197620.11	novel	1403	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	37.2382531813725	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	-1	True	NA	NA	False	AATAAA	-15	NA	149540618	149547309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_149541293_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_9864.nnic	chr1	-	3673	13	NIC	ENSG00000143815.15	novel	3748	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	62	junction_4	188.835080162559	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGCCTTTTTTTTT	731	False	225428113	-7	True	AATAAA	-20	NA	225428090	225401502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_98640.known	chrX	+	1403	5	FSM	ENSG00000197620.11	ENST00000423421.5	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.6649659421222	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	-43	True	NA	NA	False	AATAAA	-15	NA	149540974	149547309	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_98641.known	chrX	+	2407	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	37.1348892552543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTGCAGTGTTTCTGA	-6	True	NA	NA	False	ATTAAA	-42	NA	149541011	149548331	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_98646.known	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	19.4050394371038	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	6	True	NA	NA	False	AATAAA	-17	NA	149631792	149596555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_98648.known	chrX	-	2662	6	FSM	ENSG00000269556.9	ENST00000611119.4	2662	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	100.266843971474	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631912	149596556	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149631542
transcript_98652.known	chrX	-	2178	4	FSM	ENSG00000269556.9	ENST00000612022.1	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	113.420554672521	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	17	True	NA	NA	False	AATAAA	-17	NA	149631719	149596555	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149631542
transcript_98653.known	chrX	-	903	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	4.71404520791032	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	38	True	NA	-15	True	AATAAA	-16	NA	149631698	149603708	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
transcript_98663.nic	chrX	-	1877	6	NIC	ENSG00000197021.9	novel	1440	6	NA	NA	-153	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	96.6569190487675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938853	149929526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_98665.known	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	74.9682599504617	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	34	True	NA	NA	False	AATAAA	-20	NA	149938435	149929526	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_9867.known	chr1	-	13168	15	FSM	ENSG00000154380.18	ENST00000366844.7	13168	15	0	0	0	0	multi-exon	TRUE	canonical	3	428	junction_9	71.6577751168279	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATGAGATTTGTATTT	-23	True	NA	-10	True	AATAAA	-17	NA	225653142	225486834	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_98670.known	chrX	-	1129	6	FSM	ENSG00000197021.9	ENST00000370409.7	1129	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	108.680449023732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCACCTGATCCCTTTG	-3	True	NA	NA	False	NA	NA	NA	149938472	149932578	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938192
transcript_98673.known	chrX	-	1316	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	92.7523584605804	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	10	True	NA	NA	False	AATAAA	-11	NA	149938459	149932200	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_98674.nic	chrX	-	1642	5	NIC	ENSG00000197021.9	novel	1333	5	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	82.7749207187781	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938749	149932196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_98675.known	chrX	-	1333	5	FSM	ENSG00000197021.9	ENST00000370406.8	1333	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	40.3693881548879	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	-22	True	NA	NA	False	AATAAA	-15	NA	149938491	149932196	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_98677.known	chrX	+	3412	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	11.7822505732746	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	1	True	NA	11	True	AATAAA	-20	NA	150568620	150673143	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
transcript_98690.known	chrX	+	3507	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_4	426.168027308478	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	13	True	NA	36	True	AATAAA	-26	NA	150983334	150990771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_98694.known	chrX	+	812	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1601.61346382328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	41	False	NA	13	True	AATAAA	-18	NA	150983405	150987932	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_98696.known	chrX	+	2020	2	FSM	ENSG00000102195.10	ENST00000218316.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCTTTCTAGTTTGTT	-2	True	NA	NA	False	NA	NA	NA	151176583	151181465	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151176909_151179770
transcript_98697.known	chrX	+	4715	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	2	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	4	True	NA	18	True	ATTAAA	-20	NA	151397205	151409364	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151397362_151403630_151403741_151404915
transcript_98698.known	chrX	+	482	2	FSM	ENSG00000214915.3	ENST00000454307.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGAACCTGTTGTAA	NA	False	NA	-17	True	NA	NA	NA	151515550	151516245	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151515681_151515893
transcript_9870.known	chr1	+	856	5	FSM	ENSG00000143742.14	ENST00000651465.1	856	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	2881.11237198413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTCTCTGGCAAATTT	12	True	NA	NA	False	AAAACA	-5	NA	225777845	225789627	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789033_225789142_225789239
transcript_98700.known	chrX	+	914	3	FSM	ENSG00000147381.12	ENST00000448295.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAGGAAATCTGGGA	564	False	NA	NA	False	NA	NA	NA	151913462	151924315	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_151913589_151923452_151923525_151923599
transcript_98701.nic	chrX	-	1630	5	ISM	ENSG00000011677.13	ENST00000370314.9	3669	10	-71	88732	-71	-3908	5prime_fragment	FALSE	canonical	3	46	junction_4	9.08295106229247	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAATAAGATTCTTT	339	False	NA	NA	False	AATAAA	-14	NA	152451386	152254965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_98703.known	chrX	-	1413	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	1	190	junction_3	129.265231210871	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGAATTTATTTGC	-13	True	NA	2	True	NA	NA	NA	152830757	152826993	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
transcript_98710.known	chrX	+	1630	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	120.596887915899	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTCTCTCTGTTTA	3220	False	NA	29	True	NA	NA	NA	152830966	152869363	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_98715.known	chrX	+	1833	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_6	22.7434673284978	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCGTGCCTGCCTGCA	-1	True	NA	NA	False	NA	NA	NA	152831062	152869729	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_98720.nic	chrX	-	1511	11	ISM	ENSG00000183479.13	ENST00000330912.7	2509	13	-17	3195	-17	-2948	5prime_fragment	FALSE	canonical	3	70	junction_3	177.330313257491	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	463	False	NA	-19	True	AAGAAA	-15	NA	153470604	153447667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_98724.known	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	33.8967204065672	464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	-2	True	NA	-19	True	AAGAAA	-15	NA	153470576	153447667	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_9873.known	chr1	+	1596	4	FSM	ENSG00000143742.14	ENST00000366839.8	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	2961.36364985232	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTGTTGAAGTTT	3	True	NA	14	True	AATAAA	-18	NA	225777836	225790466	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789239
transcript_98730.known	chrX	+	2353	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	2.07019667802706	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	0	True	NA	12	True	ATTAAA	-19	NA	153494979	153509546	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
transcript_98733.known	chrX	-	1473	12	FSM	ENSG00000130822.16	ENST00000340888.8	1473	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	6.94131242502585	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	3	True	NA	-6	True	AATAAA	-15	NA	153673813	153669732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673779
transcript_98734.nic	chrX	-	1734	12	NIC	ENSG00000130822.16	novel	1473	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	7.63095046233939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	1159	False	NA	-6	True	AATAAA	-15	NA	153686795	153669732	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153686500
transcript_98746.known	chrX	-	1433	9	FSM	ENSG00000185825.17	ENST00000647529.1	1433	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1254.85706357338	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCGGTGTGTGACTGC	-43	True	NA	-20	True	AATAAA	-19	NA	153724435	153700495	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507_153723613_153724333
transcript_98754.known	chrX	-	1350	8	FSM	ENSG00000185825.17	ENST00000672675.1	1350	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1031.21972559149	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGTGCGGTGTGTGA	4	True	NA	-24	True	AATAAA	-15	NA	153724388	153700499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724260
transcript_98755.known	chrX	-	1284	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_3	189.846447081287	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	5	True	NA	-16	True	AATAAA	-23	NA	153724387	153700491	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_98757.known	chrX	-	1175	8	FSM	ENSG00000185825.17	ENST00000645377.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1038.55928466078	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGCGGTGTGTGACTG	4	True	NA	-21	True	AATAAA	-18	NA	153724388	153700496	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153700976_153702006_153702108_153703039_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_98759.known	chrX	-	573	4	FSM	ENSG00000185825.17	ENST00000645802.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	2875	junction_3	146.244847962434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCCTGTCTGTGTTAG	-4	True	NA	NA	False	NA	NA	NA	153724396	153715416	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153715690_153720871_153720973_153723152_153723289_153724333
transcript_9876.known	chr1	+	540	4	FSM	ENSG00000143742.14	ENST00000366838.1	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3210.75653943982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTTTTCAGTTAGAAA	101	False	NA	NA	False	NA	NA	NA	225777934	225789524	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225789033_225789142_225789239
transcript_98762.known	chrX	-	1335	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	28.7560380132977	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGCGTGGGCCTCCCT	0	True	NA	-37	True	AATAAA	-15	NA	153794375	153785767	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_98764.known	chrX	-	1712	12	FSM	ENSG00000067829.20	ENST00000370092.7	1712	12	0	0	0	0	multi-exon	TRUE	canonical	3	258	junction_5	28.9915918275319	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	0	True	NA	-35	True	AATAAA	-17	NA	153794512	153785765	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_98775.known	chrX	+	745	7	FSM	ENSG00000180879.14	ENST00000370087.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	713.743281735262	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	16	True	NA	46	True	AATAAA	-27	NA	153794190	153798498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794335_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98777.known	chrX	+	1671	7	FSM	ENSG00000180879.14	ENST00000320857.7	1671	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	707.116307422069	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	NA	False	NA	46	True	AATAAA	-27	NA	153793515	153798498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794586_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98788.known	chrX	+	608	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_5	120.741707789811	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	11	True	NA	47	True	AATAAA	-28	NA	153794667	153798499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98789.nic	chrX	+	1457	6	NIC	ENSG00000180879.14	novel	785	7	NA	NA	-69	0	intron_retention	FALSE	canonical	3	88	junction_1	741.189854220901	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	415	False	NA	47	True	AATAAA	-28	NA	153794589	153798499	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_153794755_153795662_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_9879.known	chr1	+	548	3	FSM	ENSG00000143742.14	ENST00000650651.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTAGTCCCAGCTACT	-4	True	NA	NA	False	AATAGA	-26	NA	225777829	225788266	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225787970
transcript_98791.known	chrX	+	526	5	FSM	ENSG00000180879.14	ENST00000370085.3	526	5	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	773.209989265529	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	17	True	NA	46	True	AATAAA	-27	NA	153794673	153798498	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794755_153796433_153796553_153797724_153797815_153798070_153798137_153798328
transcript_98793.known	chrX	-	1662	11	FSM	ENSG00000067829.20	ENST00000370093.5	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_4	19.1627242322171	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCGTGGGCCTCCCTC	-6	True	NA	-36	True	AATAAA	-16	NA	153794381	153785766	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_98794.known	chrX	+	785	7	FSM	ENSG00000180879.14	ENST00000471880.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	879.332401439991	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	22	False	NA	41	True	AATAAA	-22	NA	153794678	153798493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153794755_153795662_153795862_153796438_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98795.known	chrX	+	2482	4	FSM	ENSG00000180879.14	ENST00000460616.5	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	1858	junction_3	109.393276250823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	2	True	NA	41	True	AATAAA	-22	NA	153794658	153798493	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070
transcript_98796.known	chrX	+	701	5	FSM	ENSG00000180879.14	ENST00000485612.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_4	126.52149026944	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGGGGCTGCTGGCTTG	1595	False	NA	45	True	AATAAA	-26	NA	153796251	153798497	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_98799.known	chrX	-	1603	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_3	25.7206341369758	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTCTGTGTTGTA	9742	False	153935065	-11	True	NA	NA	NA	153935037	153929224	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_9880.known	chr1	+	1481	3	FSM	ENSG00000143742.14	ENST00000304786.12	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	5637	junction_2	600	5970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTTGTGTTGAAGT	-8	True	NA	12	True	AATAAA	-16	NA	225777825	225790464	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225789239
transcript_98801.known	chrX	-	1080	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	19.3792558049982	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTTTGTGTGTGAGCG	-7	True	NA	-30	True	AATAAA	-18	NA	153935015	153929925	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_98802.known	chrX	-	837	7	FSM	ENSG00000102030.16	ENST00000370009.5	837	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	196.669562125578	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGTGTGTGAGCGCG	-7	True	NA	-28	True	AATAAA	-20	NA	153935015	153929923	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153930224_153930762_153930848_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_98804.known	chrX	-	1334	11	FSM	ENSG00000102032.13	ENST00000393700.8	1334	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.94368283772331	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTGTGCGCGCGTC	-6	True	NA	-1	True	AATAAA	-17	NA	153944643	153935268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
transcript_98806.known	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	12	True	NA	8	True	NA	NA	NA	153972753	153983194	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_153972861_153981849
transcript_98807.known	chrX	-	1712	5	FSM	ENSG00000169057.24	ENST00000628176.2	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	45.0194402452985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	1	True	NA	NA	False	AATAAA	-21	NA	154097737	154030238	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154092183_154092308_154097603
transcript_98808.known	chrX	-	10467	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	23.5702260395516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	-21	True	NA	-3	True	GATAAA	-18	NA	154097717	154021572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
transcript_98809.known	chrX	-	1174	4	FSM	ENSG00000169057.24	ENST00000407218.5	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	52.4743323497837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCAGCGTCTGCAAAG	7	True	NA	NA	False	NA	NA	NA	154097689	154030604	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154097603
transcript_9881.known	chr1	+	1420	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	3368	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGTTGAAGTTTTT	38	False	NA	16	True	AATAAA	-20	NA	225777871	225790468	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225778013_225783299_225783369_225789258
transcript_98810.known	chrX	-	10343	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	42.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	-21	True	NA	-3	True	GATAAA	-18	NA	154097717	154021572	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154031451_154032206_154032558_154097603
transcript_98811.nic	chrX	-	341	3	ISM	ENSG00000169057.24	ENST00000628176.2	1712	5	16	2220	-4	0	5prime_fragment	FALSE	canonical	3	83	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAGCCCGTGCAGCCAT	17	False	154097738	NA	False	AAAAAG	-36	NA	154097721	154032458	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_154032558_154092183_154092308_154097603
transcript_98813.known	chrX	-	2558	1	FSM	ENSG00000169057.24	ENST00000629277.1	2558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATGAGTTTAATAGGC	215	False	NA	NA	False	NA	NA	NA	154097523	154094965	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154095000_154097500
transcript_98814.known	chrX	+	1114	6	FSM	ENSG00000102119.12	ENST00000684633.1	1114	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	147.603522993186	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTTGGGGCTCCAGGA	70	False	NA	82	True	NA	NA	NA	154379508	154381574	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379563_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_98815.known	chrX	+	946	6	FSM	ENSG00000102119.12	ENST00000428228.5	946	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	168.476229777378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGCAGGGGCTTTATGT	-21	True	NA	NA	False	NA	NA	NA	154379360	154381283	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379538_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_98817.known	chrX	+	1281	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	34.9606922128267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	70	False	NA	31	True	AATAAA	-19	NA	154379508	154381523	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
transcript_98820.known	chrX	-	3008	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	16.1665712101038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	11	True	NA	NA	False	AATAAA	-26	NA	154412090	154401237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
transcript_98821.known	chrX	-	2249	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	16.7332005306815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGGCTGTAAACTG	-11	True	NA	NA	False	AATAAA	-20	NA	154412112	154401760	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
transcript_98824.known	chrX	-	2665	8	FSM	ENSG00000013563.14	ENST00000393638.5	2665	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	23.5545394039156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	11	True	NA	NA	False	AATAAA	-26	NA	154412090	154401237	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154411890
transcript_98836.known	chrX	+	1656	6	FSM	ENSG00000147403.18	ENST00000492572.5	1656	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7363.00371859203	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTTCCTGTCCACCTA	NA	False	NA	13	True	AATAAA	-1	NA	154389954	154400897	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154389973_154398064_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802
transcript_98837.known	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	18400	junction_4	223.408118697598	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	10	False	NA	29	True	AATAAA	-17	NA	154398496	154400913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
transcript_98838.known	chrX	+	585	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	7219.81210281819	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	-2	True	NA	33	True	AATAAA	-21	NA	154398377	154400917	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
transcript_98839.known	chrX	+	1731	2	FSM	ENSG00000147403.18	ENST00000482732.1	1731	2	0	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	8	True	NA	29	True	AATAAA	-17	NA	154398387	154400913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398543_154399337
transcript_98840.known	chrX	+	1519	3	FSM	ENSG00000147403.18	ENST00000489200.5	1519	3	0	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	162.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCCTGTCCACCTAT	-3	True	NA	14	True	AATAAA	-2	NA	154398376	154400898	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398543_154399337_154399595_154399802
transcript_98841.known	chrX	+	748	6	FSM	ENSG00000147403.18	ENST00000406022.6	748	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7358.04812161486	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTATGTCTTTGTATC	403	False	NA	25	True	AATAAA	-13	NA	154398889	154400909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398961_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
transcript_98842.known	chrX	+	1369	5	FSM	ENSG00000147403.18	ENST00000491035.5	1369	5	0	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_4	545.379225860318	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	-3	True	NA	29	True	AATAAA	-17	NA	154398376	154400913	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154400627_154400701
transcript_98843.known	chrX	-	598	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	2	33	-2	multi-exon	FALSE	canonical	3	35	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCTGGCACTTTGTT	-9	True	NA	-2	True	AATAAA	-21	NA	154428479	154424379	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154424626_154428127
transcript_98844.known	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	2	430	junction_7	94.7652069297822	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	-2	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_98845.known	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_5	92.9908059971522	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	-6	True	NA	23	True	AATAAA	-17	NA	154437153	154443467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_98849.nic	chrX	+	2481	10	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	872	junction_5	68.2999918659504	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	-12	True	NA	23	True	AATAAA	-17	NA	154437147	154443467	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_98856.known	chrX	+	600	4	FSM	ENSG00000203879.12	ENST00000475976.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_2	21.6999743983464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGAAGGACCAGAGAGG	-6	True	NA	NA	False	NA	NA	NA	154437153	154439251	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005
transcript_98857.known	chrX	+	1337	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_5	49.5991571388959	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	2	True	NA	54	True	NA	NA	NA	154444140	154450654	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_98858.known	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1749	junction_1	95.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	15	True	NA	-16	True	AATAAA	-19	NA	154479257	154477768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154478059_154478282_154478412_154478727
transcript_98859.known	chrX	-	2327	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	29.6348143611905	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	-9	True	NA	-4	True	AATAAA	-22	NA	154486615	154483716	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
transcript_98862.known	chrX	-	1862	3	FSM	ENSG00000126903.16	ENST00000393587.4	1862	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	42.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATATATTTCAATAAA	-4	True	NA	-37	True	NA	NA	NA	154490663	154487342	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154489083_154490306_154490359_154490593
transcript_98863.known	chrX	-	1815	11	FSM	ENSG00000071889.17	ENST00000322269.10	1815	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	23.546761985462	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	-16	True	NA	-2	True	AATAAA	-29	NA	154516242	154506159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
transcript_98867.nic	chrX	-	1826	11	NIC	ENSG00000071889.17	novel	1815	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	27.4262647839621	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-17	True	NA	-13	True	AATAAA	-18	NA	154516243	154506170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
transcript_98868.known	chrX	-	1901	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	23.6429197503394	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-16	True	NA	-13	True	AATAAA	-18	NA	154516242	154506170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_98869.known	chrX	-	1712	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_9	15.2663593693802	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	-10	True	NA	-1	True	AATAAA	-30	NA	154516236	154506158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_9887.known	chr1	-	4109	25	FSM	ENSG00000196187.12	ENST00000366835.8	4109	25	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_17	40.5388830836108	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	6765	False	225882397	-12	True	AGTAAA	-17	NA	225882380	225845535	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
transcript_98871.nic	chrX	-	1931	10	NIC	ENSG00000071889.17	novel	1901	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	10	junction_4	28.2095334555143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-25	True	NA	-13	True	AATAAA	-18	NA	154516251	154506170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_98872.known	chrX	-	1359	10	FSM	ENSG00000071889.17	ENST00000369641.7	1359	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	22.878638481462	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCCATTCCTCACGCC	-12	True	NA	NA	False	NA	NA	NA	154516238	154506534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_98874.known	chrX	-	1793	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	11.3571288184999	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-6	True	NA	-13	True	AATAAA	-18	NA	154516232	154506170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_98875.known	chrX	-	1041	9	FSM	ENSG00000071889.17	ENST00000393572.5	1041	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	25.7921378524542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGGGGCTGCAGGGGG	-21	True	NA	NA	False	GGGGCT	-40	NA	154516160	154506639	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154515759_154515813_154515909
transcript_98878.nic	chrX	-	1656	9	NIC	ENSG00000071889.17	novel	1521	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	23.4134042804544	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-17	True	NA	-13	True	AATAAA	-18	NA	154516243	154506170	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_98880.known	chrX	-	1763	8	FSM	ENSG00000071889.17	ENST00000419205.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	22.5759489144478	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	-16	True	NA	-2	True	AATAAA	-29	NA	154516242	154506159	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_98882.known	chrX	-	1661	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	17.4186601729933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	-4	True	NA	NA	False	NA	NA	NA	154547572	154531999	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
transcript_98884.known	chrX	-	2223	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	9.24061085041941	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCCCCTTGTCATT	-1	True	NA	-7	True	ATTAAA	-14	NA	154546846	154531390	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
transcript_98885.known	chrX	+	2469	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_6	67.3960651064788	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTATGTTTGTTTTCT	10	True	NA	25	True	ATTAAA	-36	NA	154762863	154777689	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
transcript_98890.known	chrX	+	3079	14	FSM	ENSG00000130826.18	ENST00000620277.4	3079	14	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_6	67.3630102350615	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	2	True	NA	24	True	ATTAAA	-35	NA	154762741	154777688	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154775274_154776186_154776325_154776798
transcript_98898.known	chrX	-	2195	13	FSM	ENSG00000130830.15	ENST00000413259.7	2195	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	25.1490004219297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACCTTGTAACTCTGGG	111	False	NA	-2	True	AATAAA	-20	NA	154805527	154778685	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154799744_154799894_154805271
transcript_98899.known	chrX	-	1389	12	FSM	ENSG00000130830.15	ENST00000393531.5	1389	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	20.7376369622206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCCCCTCTCCAGCATT	-4	True	NA	NA	False	NA	NA	NA	154805397	154779152	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786341_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_9890.known	chr1	+	1635	9	FSM	ENSG00000143819.13	ENST00000272167.10	1635	9	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_7	30.8828431333645	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	-1	True	NA	17	True	GATAAA	-17	NA	225810123	225845563	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_225810170_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_98900.known	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	7.10022697809696	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	-26	True	NA	0	True	AATAAA	-22	NA	154805485	154778683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_98902.nic	chrX	-	1628	8	NIC	ENSG00000130830.15	novel	2006	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	24.8407170687522	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	-26	True	NA	0	True	AATAAA	-22	NA	154805485	154778683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154805271
transcript_98903.nnic	chrX	-	1404	7	NIC	ENSG00000130830.15	novel	2006	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	27.516156869899	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	1	True	NA	0	True	AATAAA	-22	NA	154805458	154778683	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154805271
transcript_98904.known	chrX	-	791	6	FSM	ENSG00000185010.15	ENST00000423959.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.86781592116274	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTCTGCCAGGTATGT	3	True	NA	NA	False	NA	NA	NA	155026940	154984700	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_154984804_154987236_154987306_154992935_154993149_154996972_154997096_154999478_154999601_155026779
transcript_98907.known	chrX	+	6297	5	FSM	ENSG00000165775.18	ENST00000369498.8	6297	5	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	13.5346776836392	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGTTATTATTAACAC	1	True	NA	NA	False	ATTAAA	-15	NA	155026843	155060304	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155027072_155033402_155033554_155046508_155046585_155051669_155051802_155054594
transcript_98909.known	chrX	+	2846	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_7	98.0178765951977	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	-3	True	NA	10	True	AATAAA	-23	NA	155071502	155123074	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_98912.known	chrX	+	2769	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_4	49.3060848171907	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTCAATGTCTTGG	2	True	NA	13	True	AATAAA	-26	NA	155071507	155123077	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_98916.known	chrX	+	2641	10	FSM	ENSG00000185515.16	ENST00000369459.6	2641	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	94.4716300742656	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATTATTGTCAATGT	-7	True	NA	8	True	AATAAA	-21	NA	155071498	155123072	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116710_155116755_155119998_155120169_155121222
transcript_98926.known	chrX	-	2184	5	FSM	ENSG00000214827.11	ENST00000369476.8	2184	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6.28490254498827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGATATGCCGCAGA	130	False	155071165	NA	False	AATAAA	-21	NA	155071136	155064033	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155065400_155065485_155065538_155065618_155065790_155065905_155066058_155070693
transcript_98927.known	chrX	-	1138	4	FSM	ENSG00000214827.11	ENST00000482244.5	1138	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	6.54896090146283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTTTTGCTCCAGTGTT	130	False	155071165	NA	False	NA	NA	NA	155071136	155064927	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155065400_155065485_155065538_155065618_155065790_155070693
transcript_98928.known	chrX	-	881	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	40	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	130	False	155071165	-2	True	AATAAA	-18	NA	155071136	155061621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155061992_155063965_155064034_155070693
transcript_98930.nnic	chrX	-	615	3	NNC	ENSG00000182712.16	novel	881	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	101	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	126	False	155071165	-2	True	AATAAA	-18	NA	155071140	155061621	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrX_-_155061992_155063965_155064034_155070963
transcript_98933.known	chrX	+	1616	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_3	42.0970307741532	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	-2	True	NA	42	True	ATTAAA	-43	NA	155216459	155239841	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
transcript_98936.known	chrX	-	3413	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAAGTGTGTGTTATA	-14	True	NA	-6	True	AGTAAA	-23	NA	155264491	155258234	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155261230_155264073
transcript_98941.known	chrX	-	3952	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	28.1519202230487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAGAAGTTACCACAT	-3	True	NA	NA	False	AATAAA	-24	NA	155612952	155489010	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_98948.nnic	chrX	-	1359	7	NIC	ENSG00000185973.12	novel	3952	8	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	45.5472892229116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGATTGTCTCCTTATC	NA	False	NA	NA	False	NA	NA	NA	155612974	155491448	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155545095_155545278_155612791
transcript_98949.nnic	chrX	-	1252	7	NIC	ENSG00000185973.12	novel	3952	8	NA	NA	-4	-84	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	36.9131864424264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAGCATCTGGATTATG	-7	True	NA	NA	False	ATTAAA	-34	NA	155612956	155491532	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155612791
transcript_98950.nic	chrX	-	1698	7	ISM	ENSG00000185973.12	ENST00000334398.8	3952	8	-22	2966	-22	-528	5prime_fragment	FALSE	canonical	3	64	junction_1	24.5877114745467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAACCAATTATCTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	155612974	155491976	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_98952.known	chrX	-	1248	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	33.2949779329489	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTGAGATCTTTCT	72	False	NA	NA	False	AATAAA	-17	NA	155612877	155492534	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_98959.nic	chrX	-	727	3	ISM	ENSG00000185973.12	ENST00000369439.4	1248	7	-97	31736	-22	0	5prime_fragment	FALSE	canonical	3	118	junction_1	14	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTAATAGTGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	155612974	155524270	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrX_-_155524633_155545095_155545278_155612791
transcript_9896.known	chr1	-	1680	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	360.247445823315	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	27	True	NA	-3	True	AATAAA	-18	NA	225924250	225919877	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
transcript_98960.known	chrX	-	581	2	FSM	ENSG00000185973.12	ENST00000461075.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATGGGTTTGTGAAT	11	True	NA	NA	False	NA	NA	NA	155612895	155612127	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_155612605_155612791
transcript_98961.known	chrX	+	9019	2	FSM	ENSG00000168939.12	ENST00000302805.7	9019	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTCTTATGTCTTCCT	60	False	NA	NA	False	AATAAA	-21	NA	155767811	155782459	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155768137_155773765
transcript_98962.known	chrX	+	2594	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	19.5281063796649	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	-1	True	NA	NA	False	AATAAA	-21	NA	155881344	155943769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_98963.known	chrX	+	742	8	FSM	ENSG00000124333.16	ENST00000479687.6	742	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	80.290543830338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGGATTTACATG	12	True	NA	NA	False	NA	NA	NA	155881357	155941909	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889634_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_98965.known	chrX	+	658	7	FSM	ENSG00000124333.16	ENST00000460621.6	658	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	83.7967116830302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAGTTAAAAGCAATCC	32	True	NA	NA	False	AAGAAA	-42	NA	155881377	155941989	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889548_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_98966.known	chrX	+	2496	7	FSM	ENSG00000124333.16	ENST00000262640.11	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	82.7615383026574	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	29	True	NA	NA	False	AATAAA	-21	NA	155881374	155943769	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155939700_155939794_155941882
transcript_98967.known	chrX	+	696	7	FSM	ENSG00000124333.16	ENST00000488344.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	81.2412388438833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGGAAAGAAGAAGTT	14	True	NA	NA	False	NA	NA	NA	155881359	155941944	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_+_155881449_155889457_155889613_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_98971.known	chrX	-	1054	2	FSM	ENSG00000185203.12	ENST00000399966.9	1054	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	156016837	156014622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrX_-_156015501_156016661
transcript_98972.known	chrY	-	828	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTGGTATTTCATTT	-1	True	NA	-11	True	AATAAA	-17	NA	2787682	2786854	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_2786900_2787700
transcript_98973.known	chrY	+	811	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	814.872314469506	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	47	False	NA	-27	True	NA	NA	NA	2841919	2866862	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_98978.known	chrY	+	1189	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_1	382.874508016516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCCCTTTTTCCTTGCT	0	True	NA	NA	False	ATTAAA	-19	NA	2841601	2867268	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_98979.known	chrY	+	5113	8	FSM	ENSG00000067646.12	ENST00000383052.5	5113	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	6.13454587245254	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	139	False	NA	25	True	AATAAA	-41	NA	2935280	2982506	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
transcript_98985.nnic	chrY	+	2956	3	NIC	ENSG00000099715.14	novel	4824	7	NA	NA	0	-1148	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCATTCCCCTA	0	True	NA	NA	False	AAAAAG	-6	NA	5000295	5100289	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_5000606_5056888_5057460_5098214
transcript_98987.known	chrY	-	2183	4	FSM	ENSG00000239893.2	ENST00000651148.1	2183	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCTTTTGGCCAACTC	NA	False	NA	-47	True	NA	NA	NA	8126293	8068444	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_8070118_8076989_8077175_8111849_8111965_8126083
transcript_98996.nnic	chrY	-	804	5	NNC	ENSG00000206159.12	novel	617	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	52.2781024904309	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCCCCCATTCTTTG	-12	True	NA	-13	True	AATAAA	-16	NA	12421597	12378533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_12378750_12382178_12382328_12406795_12406938_12420315_12420455_12421439
transcript_98997.nnic	chrY	-	671	5	NNC	ENSG00000206159.12	novel	534	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	52.3993082015402	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCCCCCATTCTTTG	11	True	NA	-13	True	AATAAA	-16	NA	12421574	12378533	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_12378750_12382178_12382328_12406795_12406938_12420315_12420455_12421549
transcript_98998.nnic	chrY	-	790	5	NIC	ENSG00000206159.12	novel	617	4	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	55.6012589785519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	-12	True	NA	-16	True	AATAAA	-13	NA	12421597	12378536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_-_12378750_12398679_12398818_12406795_12406938_12420315_12420455_12421439
transcript_99.known	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2863	junction_1	0	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_SIRV4_-_4104_5007
transcript_99002.nnic	chrY	-	795	4	NIC	ENSG00000206159.12	novel	639	3	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	48.2493523272593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACGCATAGCTTCTG	-12	True	NA	-10	True	ATTAAA	-20	NA	12421597	12354415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_-_12354772_12406795_12406938_12420315_12420455_12421439
transcript_99003.nic	chrY	-	673	4	NIC	ENSG00000206159.12	novel	639	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	47.4856703531591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACGCATAGCTTCTG	0	True	NA	-10	True	ATTAAA	-20	NA	12421585	12354415	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_-_12354772_12406795_12406938_12420315_12420455_12421549
transcript_99005.nnic	chrY	-	652	4	FSM	ENSG00000206159.12	ENST00000689264.1	617	4	-38	3	-10	-3	multi-exon	FALSE	canonical	3	55	junction_1	41.0852771683483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	-12	True	NA	-16	True	AATAAA	-13	NA	12421597	12378536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421439
transcript_99006.nnic	chrY	-	635	4	FSM	ENSG00000206159.12	ENST00000382965.3	534	4	-106	5	-103	-3	multi-exon	FALSE	canonical	3	55	junction_1	39.7184535896799	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	NA	False	NA	-16	True	AATAAA	-13	NA	12421690	12378536	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421549
transcript_99008.nnic	chrY	-	648	4	NNC	ENSG00000206159.12	novel	2203	10	NA	NA	-103	1087	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	53.372901988431	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGATGGACTCTCACT	NA	False	NA	NA	False	AATAAA	-17	NA	12421690	12382101	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_12382328_12406795_12406938_12420315_12420455_12421549
transcript_99009.nic	chrY	-	656	4	NIC	ENSG00000206159.12	novel	623	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	56.8565446247542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCATTGATCTGGAAAT	1	True	NA	NA	False	AATAAA	-39	NA	12421584	12402250	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_-_12402591_12406795_12406938_12420315_12420455_12421549
transcript_99024.nic	chrY	+	719	6	NIC	ENSG00000114374.13	novel	2417	9	NA	NA	17	-176	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	259.316486170856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAAAATGACAACC	-14	True	NA	NA	False	NA	NA	NA	12662350	12708693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12690325_12690442_12702009_12702056_12708633
transcript_99028.nnic	chrY	+	718	6	NNC	ENSG00000114374.13	novel	2417	9	NA	NA	-10	-176	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	257.400388500095	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAAAATGACAACC	-7	True	NA	NA	False	NA	NA	NA	12662357	12708693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12707759_12707882_12708633
transcript_9903.known	chr1	-	1549	6	FSM	ENSG00000143811.20	ENST00000612039.4	1549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	468.426557744114	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	NA	False	NA	-2	True	AATAAA	-19	NA	225924340	225919876	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225922203_225922384_225923700_225923772_225924043
transcript_99031.nic	chrY	+	656	5	ISM	ENSG00000114374.13	ENST00000457658.6	2417	9	124704	6814	-14	-6814	internal_fragment	FALSE	canonical	3	52	junction_4	265.193325707869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGCTAGCTGAAGAA	-11	True	NA	NA	False	NA	NA	NA	12662353	12702055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_12662707_12664639_12664687_12686512_12686607_12690325_12690442_12702009
transcript_99034.nic	chrY	+	706	5	NIC	ENSG00000114374.13	novel	2417	9	NA	NA	-86	-176	combination_of_known_junctions	FALSE	canonical	3	68	junction_4	229.6660619247	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAAAATGACAACC	NA	False	NA	NA	False	NA	NA	NA	12662247	12708693	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12708633
transcript_99037.known	chrY	+	5284	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	186.269219739124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662333	12692233	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
transcript_99040.nic	chrY	+	646	4	ISM	ENSG00000114374.13	ENST00000651177.1	9640	48	-120	158747	-86	-6814	5prime_fragment	FALSE	canonical	3	234	junction_3	170.247532205968	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGCTAGCTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12662247	12702055	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009
transcript_99048.known	chrY	-	1076	3	FSM	ENSG00000286009.2	ENST00000651143.2	1076	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAGCCCCACTTGCTCA	NA	False	NA	-2	True	ATTAAA	-18	NA	12663474	12661314	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_12662125_12662656_12662752_12663303
transcript_99049.known	chrY	-	1153	3	FSM	ENSG00000286009.2	ENST00000652216.1	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACTTGCTCATGATTG	NA	False	NA	4	True	ATTAAA	-24	NA	12663474	12661308	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_12662122_12662525_12662752_12663360
transcript_99051.known	chrY	+	4408	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_9	39.1937794012009	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	-8	True	NA	18	True	AATAAA	-14	NA	12904867	12920478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_99057.nic	chrY	+	2474	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	83.222194117615	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGCACAGAGGTATGAT	265	False	NA	24	True	AATAAA	-27	NA	12905696	12918539	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_99058.nic	chrY	+	4413	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	83.222194117615	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	265	False	NA	18	True	AATAAA	-14	NA	12905696	12920478	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_9907.nnic	chr1	-	1552	3	NNC	ENSG00000143768.13	novel	2019	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1563.5	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	-1	True	NA	-13	True	AATAAA	-14	NA	225941220	225936602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_225937805_225939360_225939467_225940976
transcript_9908.known	chr1	-	342	2	FSM	ENSG00000248322.1	ENST00000513672.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCTCTTTAGTTTAT	3956	False	NA	-28	True	ATTAAA	-14	NA	225937557	225936410	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225936578_225937382
transcript_99081.nic	chrY	-	1695	8	ISM	ENSG00000183878.16	ENST00000329134.9	4325	20	662	70118	-6	0	5prime_fragment	FALSE	canonical	3	51	junction_1	9.61928335401853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATAACCATGTTGGG	-20	True	NA	-17	True	AATAAA	-5	NA	13480008	13393151	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_-_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_99082.nnic	chrY	-	2116	8	NNC	ENSG00000183878.16	novel	1539	7	NA	NA	-27	389	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	32.6402781100597	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGAAGGATGA	701	False	NA	NA	False	NA	NA	NA	13480060	13395912	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_13396973_13403782_13403889_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_99083.known	chrY	-	1539	7	FSM	ENSG00000183878.16	ENST00000382893.2	1539	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	5.87839736284947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTCTATAATTGAAT	10	True	NA	NA	False	ATTAAA	-26	NA	13479978	13396301	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_99087.known	chrY	-	686	2	FSM	ENSG00000183878.16	ENST00000479713.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACCGGGCTAAACCGGG	-5	True	NA	NA	False	NA	NA	NA	13479923	13479041	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_13479318_13479513
transcript_99088.known	chrY	+	1337	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	-4	True	NA	5	True	AATAAA	-18	NA	13703898	13706024	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_13704436_13705224
transcript_9909.nic	chr1	-	1506	2	ISM	ENSG00000143768.13	ENST00000366820.10	2019	4	1556	0	437	0	3prime_fragment	FALSE	canonical	3	3127	junction_1	0	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	1849	False	NA	-13	True	AATAAA	-14	NA	225939664	225936602	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_225937805_225939360
transcript_99091.known	chrY	-	510	2	FSM	ENSG00000129864.7	ENST00000250825.5	510	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	-1	False	NA	NA	False	AATAAA	-21	NA	13986473	13985771	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_13986147_13986338
transcript_99092.known	chrY	+	540	2	FSM	ENSG00000129862.7	ENST00000250823.5	540	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	-1	True	NA	NA	False	AATAAA	-21	NA	14056226	14056958	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_14056392_14056583
transcript_99096.nic	chrY	+	1228	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	24.5051015096857	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	-17	True	NA	NA	False	AATAAA	-23	NA	14522607	14733549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_9910.nnic	chr1	-	3132	8	NNC	ENSG00000143751.10	novel	3987	7	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.3678034865554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	3502	False	NA	-3	True	AATAAA	-23	NA	225999379	225982701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chr1_-_225983685_225984575_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_99101.nic	chrY	+	1168	4	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	27.6526068692749	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	-17	True	NA	NA	False	AATAAA	-23	NA	14522607	14733549	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_14522942_14622008_14622592_14723116_14723270_14733451
transcript_9911.known	chr1	-	3987	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_1	13.3998341614945	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-2	True	NA	-3	True	AATAAA	-23	NA	225999343	225982701	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_99115.known	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000670354.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	15.4560308258262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	-7	True	NA	1	True	AATAAA	-17	NA	19076008	18872500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19075940
transcript_99116.known	chrY	-	593	4	FSM	ENSG00000176728.10	ENST00000670243.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.86676384819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	3	True	NA	1	True	AATAAA	-17	NA	19075998	18872500	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18872835_18877067_18877206_19073498_19073562_19075940
transcript_99121.known	chrY	-	541	3	FSM	ENSG00000176728.10	ENST00000667262.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGTATCAGGTGAC	1480	False	NA	-1	True	AATAAA	-15	NA	19076011	18872502	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18872835_18877067_18877206_19075940
transcript_99123.nnic	chrY	-	643	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	13	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTGTTTACTTT	1433	False	NA	-1	True	AATAAA	-31	NA	19076058	18932435	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_99125.known	chrY	-	978	3	FSM	ENSG00000176728.10	ENST00000669869.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTTGCATGTCATTT	-7	True	NA	NA	False	AATAAA	-11	NA	19076008	18932006	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_18932842_19068723_19068799_19075940
transcript_99126.nnic	chrY	-	380	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	13	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	1433	False	NA	-22	True	AATAAA	-21	NA	19076058	18932698	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_99132.nnic	chrY	-	584	4	FSM	ENSG00000215580.12	ENST00000693243.1	352	4	-232	0	-147	0	multi-exon	FALSE	canonical	3	8	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	0	True	AATAAA	-23	NA	19567239	19555389	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_-_19555555_19557229_19557290_19558039_19558141_19566981
transcript_99139.nnic	chrY	+	1032	6	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	36.6584233157947	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-30	True	NA	NA	False	AATAAA	-16	NA	19567327	19590419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567483_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_99143.nnic	chrY	+	1108	6	NNC	ENSG00000131002.13	novel	2098	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	31.7263297593655	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-18	True	NA	NA	False	AATAAA	-16	NA	19567339	19590419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567571_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_99148.known	chrY	+	1000	5	FSM	ENSG00000131002.13	ENST00000407724.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.0396150079408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	NA	False	NA	-19	True	NA	NA	NA	19567312	19590247	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567483_19587209_19587508_19588369_19588651_19589526_19589613_19590082
transcript_99151.nnic	chrY	+	1895	5	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	37.3589012151053	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-23	True	NA	NA	False	AATAAA	-16	NA	19567334	19590419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567483_19587209_19587508_19588369_19589390_19589520_19589613_19590082
transcript_99155.nic	chrY	+	1466	5	ISM	ENSG00000131002.13	ENST00000445715.6	1574	10	-32	9959	0	0	5prime_fragment	FALSE	canonical	3	16	junction_3	30.1247406627841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTATTTGTTTTTATT	-8	True	NA	13	True	AATAAA	-18	NA	19567349	19594161	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_19567483_19587209_19587508_19589520_19589613_19591779_19591960_19593398
transcript_99157.nnic	chrY	+	1978	5	NNC	ENSG00000131002.13	novel	2098	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	33.138912172852	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-18	True	NA	NA	False	AATAAA	-16	NA	19567339	19590419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NNC_chrY_+_19567571_19587209_19587508_19588369_19589390_19589520_19589613_19590082
transcript_9916.known	chr1	+	1151	4	FSM	ENSG00000163041.13	ENST00000655399.1	1151	4	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	2841.32742843122	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACCTGCTTTTGGTCTT	34	False	NA	NA	False	ATTAAA	-11	NA	226062749	226071997	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226062949_226064328_226064480_226065655_226065810_226071350
transcript_99164.nic	chrY	+	2026	4	NIC	ENSG00000131002.13	novel	1000	5	NA	NA	-15	0	intron_retention	FALSE	canonical	3	69	junction_2	14.8548533034381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-23	True	NA	NA	False	AATAAA	-16	NA	19567334	19590419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_19567483_19587209_19587508_19588369_19589613_19590082
transcript_99165.known	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.6823829464998	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	24	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
transcript_99168.known	chrY	+	2098	4	FSM	ENSG00000131002.13	ENST00000459719.6	2098	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	15.8394724940223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTATTCTCTCATGTG	-8	True	NA	NA	False	AATAAA	-15	NA	19567349	19590418	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082
transcript_99170.nic	chrY	+	958	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-32	4	-10	0	multi-exon	FALSE	canonical	3	63	junction_2	17.2497987105808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-18	True	NA	NA	False	AATAAA	-16	NA	19567339	19590419	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
transcript_99173.known	chrY	+	7299	5	FSM	ENSG00000131002.13	ENST00000253320.8	7299	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.4017766096911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGCCTCTGTGTATT	5055	False	NA	NA	False	ACTAAA	-21	NA	19592449	19606274	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19592815_19593398_19597666_19599738_19599832_19602215_19602312_19603796
transcript_99175.nic	chrY	+	1926	3	FSM	ENSG00000131002.13	ENST00000686905.1	1911	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	69	junction_2	15.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	-23	True	NA	11	True	AATAAA	-16	NA	19567334	19589849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567483_19587209_19587508_19588369
transcript_99178.nic	chrY	+	2009	3	FSM	ENSG00000131002.13	ENST00000693214.1	2569	3	-10	570	-10	0	multi-exon	FALSE	canonical	3	66	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	-18	True	NA	11	True	AATAAA	-16	NA	19567339	19589849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_19567571_19587209_19587508_19588369
transcript_99181.nic	chrY	+	2082	3	NIC	ENSG00000131002.13	novel	2018	4	NA	NA	-139	0	intron_retention	FALSE	canonical	3	6	junction_1	31.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	145	False	NA	11	True	AATAAA	-16	NA	19567647	19589849	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	NIC_chrY_+_19567952_19587209_19587508_19588369
transcript_99182.nic	chrY	+	1093	2	ISM	ENSG00000131002.13	ENST00000686905.1	1911	3	-11	1691	-11	-1689	5prime_fragment	FALSE	canonical	3	100	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGTAATATATAAAGTA	-19	True	NA	NA	False	NA	NA	NA	19567338	19588158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_19567483_19587209
transcript_99183.nic	chrY	+	1180	2	ISM	ENSG00000131002.13	ENST00000459719.6	2098	4	-10	2260	-10	-1689	5prime_fragment	FALSE	canonical	3	66	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGTAATATATAAAGTA	-18	True	NA	NA	False	NA	NA	NA	19567339	19588158	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chrY_+_19567571_19587209
transcript_99190.known	chrY	+	1339	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.3530806173192	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	17	True	NA	4	True	AATAAA	-14	NA	20575775	20593154	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
transcript_99195.known	chrY	+	746	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	233.069603337715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	-20	True	NA	14	True	AATAAA	-26	NA	20575793	20592630	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
transcript_9921.known	chr1	+	607	4	FSM	ENSG00000163041.13	ENST00000666609.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	2830.0332546142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTCTCTTCTTCC	639	False	NA	NA	False	NA	NA	NA	226063465	226071521	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226063597_226064328_226064480_226065655_226065810_226071350
transcript_9929.known	chr1	+	895	4	FSM	ENSG00000163041.13	ENST00000661429.1	895	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2854.03355893997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTATAATAATTATAAATA	5	True	NA	NA	False	NA	NA	NA	226063493	226071752	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226063682_226064328_226064480_226065655_226065810_226071350
transcript_9930.known	chr1	-	3584	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_5	38.3011695883655	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGATGTTTCATTAAT	-24	True	NA	-4	True	ATTAAA	-15	NA	226186741	226144678	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
transcript_9933.known	chr1	-	2998	15	FSM	ENSG00000183814.16	ENST00000681046.1	2998	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	19.0430500472493	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-7	True	NA	-1	True	AATAAA	-18	NA	226309164	226231156	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_9935.known	chr1	-	2909	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	30.0797755877314	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCATTTAATTCAA	-15	True	NA	7	True	AATAAA	-26	NA	226309172	226231148	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
transcript_9940.nic	chr1	-	1248	10	ISM	ENSG00000183814.16	ENST00000681046.1	2998	15	-19	34210	-11	22326	5prime_fragment	FALSE	canonical	3	97	junction_7	18.8738502225228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAAGATCTTTCTTCT	582	False	NA	NA	False	AATAAA	-20	NA	226309183	226265366	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_9942.known	chr1	-	3978	23	FSM	ENSG00000143799.14	ENST00000366794.10	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_17	275.455389287636	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-15	True	NA	-7	True	ATTAAA	-20	NA	226408093	226360690	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_9948.nic	chr1	-	1766	11	ISM	ENSG00000143799.14	ENST00000676709.1	4764	22	21	18875	21	9075	5prime_fragment	FALSE	canonical	3	2223	junction_5	144.738522861055	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATGAAATTAACTCTTA	NA	False	NA	NA	False	NA	NA	NA	226408133	226379622	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_9950.nic	chr1	-	879	5	ISM	ENSG00000143799.14	ENST00000676709.1	4764	22	21	27950	21	0	5prime_fragment	FALSE	canonical	3	2285	junction_1	123.689884388336	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAGGATAG	NA	False	NA	25	True	AAGAAA	-7	NA	226408133	226388697	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	ISM_chr1_-_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_9954.known	chr1	+	1947	13	FSM	ENSG00000143801.18	ENST00000422240.6	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	29.1328375243851	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGGTTTATCCAG	10	True	NA	95	True	NA	NA	NA	226870619	226895803	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
transcript_9955.known	chr1	+	2193	12	FSM	ENSG00000143801.18	ENST00000678320.1	2193	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	41.8709153675795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	NA	False	NA	4	True	AATAAA	-8	NA	226870560	226896086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_9956.known	chr1	+	2026	12	FSM	ENSG00000143801.18	ENST00000678021.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.1879385377775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	2	True	NA	4	True	AATAAA	-8	NA	226870611	226896086	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_9960.known	chr1	+	2866	15	FSM	ENSG00000163050.18	ENST00000366777.4	2866	15	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_6	17.4830822015257	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGCGTGTACCCTCTT	-2	True	NA	19	True	AATAAA	-19	NA	226940293	226987544	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_226940400_226961376_226961563_226964999_226965411_226965670_226965738_226977448_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
transcript_9965.known	chr1	+	798	4	FSM	ENSG00000181450.18	ENST00000440339.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	10.3387082795139	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCATACTGGAGAGAAAC	28	False	NA	NA	False	NA	NA	NA	227563579	227654768	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227654335
transcript_9968.known	chr1	+	2768	6	FSM	ENSG00000143740.15	ENST00000680854.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	127.875564514883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	10	True	NA	NA	False	NA	NA	NA	227728634	227781821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227728787_227731584_227731748_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_9971.known	chr1	-	2484	6	FSM	ENSG00000081692.13	ENST00000620518.5	2484	6	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_2	15.1340675299141	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-30	True	NA	-4	True	AATGAA	-15	NA	227735302	227731190	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_-_227732677_227732880_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_9977.known	chr1	+	1541	5	FSM	ENSG00000143740.15	ENST00000680695.1	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	133.355492950234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	26	False	NA	15	True	NA	NA	NA	227728706	227781208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227728787_227731584_227731748_227758994_227759486_227766958_227767084_227780526
transcript_9978.known	chr1	+	2403	5	FSM	ENSG00000143740.15	ENST00000426344.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	110.504242000025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCAGCTGGTCTTAGTCA	-12	True	NA	NA	False	AATAAA	-20	NA	227735435	227776969	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227775788
transcript_9979.known	chr1	+	1923	5	FSM	ENSG00000143740.15	ENST00000617596.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	25.460754112948	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	-13	True	NA	33	True	AATAAA	-18	NA	227735434	227781226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_9981.known	chr1	+	2503	5	FSM	ENSG00000143740.15	ENST00000680202.1	2503	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	115.061668247944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	233	False	NA	NA	False	NA	NA	NA	227735680	227781821	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735731_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_9983.known	chr1	+	1446	4	FSM	ENSG00000143740.15	ENST00000366760.5	1446	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	122.224747448661	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	32	True	NA	33	True	AATAAA	-18	NA	227728656	227781226	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227728787_227758994_227759486_227766958_227767084_227780526
transcript_9984.known	chr1	+	1363	4	FSM	ENSG00000143740.15	ENST00000681929.1	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	116.608556956836	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	-13	True	NA	15	True	NA	NA	NA	227735434	227781208	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227780526
transcript_9985.known	chr1	+	2375	3	FSM	ENSG00000143740.15	ENST00000480897.5	2375	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	227728538	227734352	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227728787_227731584_227731748_227732388
transcript_9987.known	chr1	+	1397	5	FSM	ENSG00000143740.15	ENST00000478768.3	1397	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	111.768734447519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCTCCCTAGTACT	-13	True	NA	8	True	AATGAA	-20	NA	227735434	227770744	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227770570
transcript_9989.known	chr1	+	578	6	FSM	ENSG00000143761.16	ENST00000473949.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1246.29264621115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGCACTCACTACGC	77	False	NA	NA	False	NA	NA	NA	228082790	228097894	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228082851_228096450_228096505_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_9993.known	chr1	+	1840	5	FSM	ENSG00000143761.16	ENST00000272102.10	1840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	313.435300341235	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCCAGTGCTTCCA	-6	True	NA	25	True	AATAAA	-18	NA	228082707	228099212	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228082766_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_9995.known	chr1	+	820	5	FSM	ENSG00000143761.16	ENST00000470558.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	994.829727893171	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTGTTTCCAATGA	75	False	NA	NA	False	NA	NA	NA	228082788	228098188	H1_mix_captrap_pacbio	iso_detect_ref_spbu_long_captrap_pacbio	FSM_chr1_+_228082851_228097077_228097263_228097341_228097453_228097590_228097716_228097851
